Multiple sequence alignment - TraesCS5D01G317100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G317100 chr5D 100.000 2503 0 0 485 2987 410490148 410492650 0.000000e+00 4623.0
1 TraesCS5D01G317100 chr5D 88.010 834 82 12 1122 1940 410620307 410621137 0.000000e+00 970.0
2 TraesCS5D01G317100 chr5D 93.900 541 31 1 2449 2987 403558319 403558859 0.000000e+00 815.0
3 TraesCS5D01G317100 chr5D 89.000 400 41 2 1170 1569 410539180 410539576 2.680000e-135 492.0
4 TraesCS5D01G317100 chr5D 89.736 341 32 1 1527 1867 72210139 72210476 1.640000e-117 433.0
5 TraesCS5D01G317100 chr5D 100.000 234 0 0 1 234 410489664 410489897 1.640000e-117 433.0
6 TraesCS5D01G317100 chr5D 88.325 197 17 2 1767 1957 410679774 410679970 6.440000e-57 231.0
7 TraesCS5D01G317100 chr5D 91.304 46 2 1 530 575 443341175 443341132 8.940000e-06 62.1
8 TraesCS5D01G317100 chr5B 91.344 1421 78 17 893 2276 492782249 492783661 0.000000e+00 1901.0
9 TraesCS5D01G317100 chr5B 86.207 667 77 11 1073 1733 493086792 493086135 0.000000e+00 708.0
10 TraesCS5D01G317100 chr5B 89.955 448 41 2 1124 1570 493140531 493140975 2.580000e-160 575.0
11 TraesCS5D01G317100 chr5B 92.375 341 23 1 1527 1867 82243115 82242778 1.610000e-132 483.0
12 TraesCS5D01G317100 chr5B 83.445 447 56 12 1527 1960 493086295 493085854 1.670000e-107 399.0
13 TraesCS5D01G317100 chr5B 89.048 210 20 1 1527 1736 82243157 82242951 1.060000e-64 257.0
14 TraesCS5D01G317100 chr5B 87.143 210 24 1 1527 1736 82243241 82243035 4.980000e-58 235.0
15 TraesCS5D01G317100 chr5B 74.246 431 51 35 485 892 492781831 492782224 3.130000e-25 126.0
16 TraesCS5D01G317100 chr5B 85.246 61 9 0 100 160 206806709 206806649 2.490000e-06 63.9
17 TraesCS5D01G317100 chr5B 91.304 46 2 1 530 575 539769451 539769408 8.940000e-06 62.1
18 TraesCS5D01G317100 chr5A 91.396 1383 91 15 893 2256 522082486 522083859 0.000000e+00 1869.0
19 TraesCS5D01G317100 chr5A 87.770 834 84 13 1122 1940 522223707 522224537 0.000000e+00 959.0
20 TraesCS5D01G317100 chr5A 90.583 446 39 1 1124 1569 522425217 522425659 3.320000e-164 588.0
21 TraesCS5D01G317100 chr5A 99.351 154 1 0 2277 2430 650133810 650133657 2.270000e-71 279.0
22 TraesCS5D01G317100 chr5A 86.099 223 24 3 1766 1981 522425712 522425934 1.790000e-57 233.0
23 TraesCS5D01G317100 chr5A 90.598 117 8 1 776 892 522082348 522082461 5.160000e-33 152.0
24 TraesCS5D01G317100 chr3D 93.506 539 35 0 2449 2987 252337868 252338406 0.000000e+00 802.0
25 TraesCS5D01G317100 chr7D 93.296 537 34 2 2451 2987 426818195 426818729 0.000000e+00 791.0
26 TraesCS5D01G317100 chr4D 92.950 539 36 1 2451 2987 409314531 409313993 0.000000e+00 784.0
27 TraesCS5D01G317100 chr7A 92.924 537 37 1 2451 2987 689857275 689856740 0.000000e+00 780.0
28 TraesCS5D01G317100 chr1D 92.818 543 31 5 2449 2987 400034073 400033535 0.000000e+00 780.0
29 TraesCS5D01G317100 chr1D 99.346 153 1 0 2275 2427 52574833 52574985 8.150000e-71 278.0
30 TraesCS5D01G317100 chr1D 98.726 157 1 1 2274 2429 351260127 351259971 8.150000e-71 278.0
31 TraesCS5D01G317100 chr2D 92.606 541 38 1 2449 2987 623306119 623305579 0.000000e+00 776.0
32 TraesCS5D01G317100 chr2D 92.308 546 40 1 2444 2987 481453554 481453009 0.000000e+00 774.0
33 TraesCS5D01G317100 chr6A 92.308 546 39 2 2445 2987 416538213 416537668 0.000000e+00 773.0
34 TraesCS5D01G317100 chr6A 98.065 155 2 1 2273 2427 31392418 31392265 4.910000e-68 268.0
35 TraesCS5D01G317100 chr1B 90.179 448 39 3 1124 1570 562433860 562433417 2.000000e-161 579.0
36 TraesCS5D01G317100 chr4B 100.000 153 0 0 2275 2427 43229864 43229712 1.750000e-72 283.0
37 TraesCS5D01G317100 chr6B 99.346 153 1 0 2277 2429 156075825 156075673 8.150000e-71 278.0
38 TraesCS5D01G317100 chr4A 99.346 153 1 0 2276 2428 593348598 593348446 8.150000e-71 278.0
39 TraesCS5D01G317100 chr2B 100.000 150 0 0 2279 2428 286979805 286979954 8.150000e-71 278.0
40 TraesCS5D01G317100 chr2A 99.338 151 1 0 2277 2427 602456963 602456813 1.050000e-69 274.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G317100 chr5D 410489664 410492650 2986 False 2528.0 4623 100.000 1 2987 2 chr5D.!!$F6 2986
1 TraesCS5D01G317100 chr5D 410620307 410621137 830 False 970.0 970 88.010 1122 1940 1 chr5D.!!$F4 818
2 TraesCS5D01G317100 chr5D 403558319 403558859 540 False 815.0 815 93.900 2449 2987 1 chr5D.!!$F2 538
3 TraesCS5D01G317100 chr5B 492781831 492783661 1830 False 1013.5 1901 82.795 485 2276 2 chr5B.!!$F2 1791
4 TraesCS5D01G317100 chr5B 493085854 493086792 938 True 553.5 708 84.826 1073 1960 2 chr5B.!!$R4 887
5 TraesCS5D01G317100 chr5A 522082348 522083859 1511 False 1010.5 1869 90.997 776 2256 2 chr5A.!!$F2 1480
6 TraesCS5D01G317100 chr5A 522223707 522224537 830 False 959.0 959 87.770 1122 1940 1 chr5A.!!$F1 818
7 TraesCS5D01G317100 chr5A 522425217 522425934 717 False 410.5 588 88.341 1124 1981 2 chr5A.!!$F3 857
8 TraesCS5D01G317100 chr3D 252337868 252338406 538 False 802.0 802 93.506 2449 2987 1 chr3D.!!$F1 538
9 TraesCS5D01G317100 chr7D 426818195 426818729 534 False 791.0 791 93.296 2451 2987 1 chr7D.!!$F1 536
10 TraesCS5D01G317100 chr4D 409313993 409314531 538 True 784.0 784 92.950 2451 2987 1 chr4D.!!$R1 536
11 TraesCS5D01G317100 chr7A 689856740 689857275 535 True 780.0 780 92.924 2451 2987 1 chr7A.!!$R1 536
12 TraesCS5D01G317100 chr1D 400033535 400034073 538 True 780.0 780 92.818 2449 2987 1 chr1D.!!$R2 538
13 TraesCS5D01G317100 chr2D 623305579 623306119 540 True 776.0 776 92.606 2449 2987 1 chr2D.!!$R2 538
14 TraesCS5D01G317100 chr2D 481453009 481453554 545 True 774.0 774 92.308 2444 2987 1 chr2D.!!$R1 543
15 TraesCS5D01G317100 chr6A 416537668 416538213 545 True 773.0 773 92.308 2445 2987 1 chr6A.!!$R2 542

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
25 26 0.108186 CCGACAACAGCAGCTGGATA 60.108 55.0 26.38 0.0 35.51 2.59 F
718 719 0.241481 TTTGCGTATTTGGGCCGTTC 59.759 50.0 0.00 0.0 0.00 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1798 1931 0.249868 CAAACCACTGCTCCTCGTCA 60.250 55.0 0.0 0.0 0.00 4.35 R
2307 2481 0.093026 GCGTTGTCGTTCAGGAATCG 59.907 55.0 0.0 0.0 39.49 3.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.809010 TCACGTCCGACAACAGCA 59.191 55.556 0.00 0.00 0.00 4.41
18 19 1.299850 TCACGTCCGACAACAGCAG 60.300 57.895 0.00 0.00 0.00 4.24
19 20 2.661866 ACGTCCGACAACAGCAGC 60.662 61.111 0.00 0.00 0.00 5.25
20 21 2.356313 CGTCCGACAACAGCAGCT 60.356 61.111 0.00 0.00 0.00 4.24
21 22 2.661566 CGTCCGACAACAGCAGCTG 61.662 63.158 21.54 21.54 37.52 4.24
22 23 2.031012 TCCGACAACAGCAGCTGG 59.969 61.111 26.38 12.00 35.51 4.85
23 24 2.031012 CCGACAACAGCAGCTGGA 59.969 61.111 26.38 0.00 35.51 3.86
24 25 1.376424 CCGACAACAGCAGCTGGAT 60.376 57.895 26.38 12.08 35.51 3.41
25 26 0.108186 CCGACAACAGCAGCTGGATA 60.108 55.000 26.38 0.00 35.51 2.59
26 27 1.284657 CGACAACAGCAGCTGGATAG 58.715 55.000 26.38 14.43 35.51 2.08
27 28 1.661341 GACAACAGCAGCTGGATAGG 58.339 55.000 26.38 12.44 35.51 2.57
28 29 0.254178 ACAACAGCAGCTGGATAGGG 59.746 55.000 26.38 10.79 35.51 3.53
29 30 0.254178 CAACAGCAGCTGGATAGGGT 59.746 55.000 26.38 0.00 35.51 4.34
30 31 0.254178 AACAGCAGCTGGATAGGGTG 59.746 55.000 26.38 6.48 35.51 4.61
34 35 1.449353 CAGCTGGATAGGGTGCTCC 59.551 63.158 5.57 0.00 33.03 4.70
44 45 3.807368 GGTGCTCCCAGTGGTAGT 58.193 61.111 8.74 0.00 0.00 2.73
45 46 1.296715 GGTGCTCCCAGTGGTAGTG 59.703 63.158 8.74 0.00 0.00 2.74
46 47 1.376037 GTGCTCCCAGTGGTAGTGC 60.376 63.158 8.74 6.95 0.00 4.40
47 48 1.841103 TGCTCCCAGTGGTAGTGCA 60.841 57.895 8.74 9.55 0.00 4.57
48 49 1.200760 TGCTCCCAGTGGTAGTGCAT 61.201 55.000 8.74 0.00 0.00 3.96
49 50 0.830648 GCTCCCAGTGGTAGTGCATA 59.169 55.000 8.74 0.00 0.00 3.14
50 51 1.417890 GCTCCCAGTGGTAGTGCATAT 59.582 52.381 8.74 0.00 0.00 1.78
51 52 2.808202 GCTCCCAGTGGTAGTGCATATG 60.808 54.545 8.74 0.00 0.00 1.78
52 53 1.768275 TCCCAGTGGTAGTGCATATGG 59.232 52.381 8.74 0.00 0.00 2.74
53 54 1.490490 CCCAGTGGTAGTGCATATGGT 59.510 52.381 8.74 0.00 0.00 3.55
54 55 2.564771 CCAGTGGTAGTGCATATGGTG 58.435 52.381 4.56 0.00 0.00 4.17
70 71 1.818060 TGGTGCACCAGAATGTATTGC 59.182 47.619 34.74 4.10 42.01 3.56
71 72 1.134946 GGTGCACCAGAATGTATTGCC 59.865 52.381 31.23 0.00 34.61 4.52
72 73 1.093972 TGCACCAGAATGTATTGCCG 58.906 50.000 0.00 0.00 34.61 5.69
73 74 0.381801 GCACCAGAATGTATTGCCGG 59.618 55.000 0.00 0.00 30.74 6.13
74 75 0.381801 CACCAGAATGTATTGCCGGC 59.618 55.000 22.73 22.73 0.00 6.13
75 76 0.751643 ACCAGAATGTATTGCCGGCC 60.752 55.000 26.77 9.02 0.00 6.13
76 77 1.648720 CAGAATGTATTGCCGGCCG 59.351 57.895 26.77 21.04 0.00 6.13
77 78 0.813610 CAGAATGTATTGCCGGCCGA 60.814 55.000 30.73 13.73 0.00 5.54
78 79 0.532862 AGAATGTATTGCCGGCCGAG 60.533 55.000 30.73 18.40 0.00 4.63
79 80 1.507141 GAATGTATTGCCGGCCGAGG 61.507 60.000 30.73 12.70 0.00 4.63
96 97 3.959975 GCGGCGTGCCAAACTGAA 61.960 61.111 12.06 0.00 37.76 3.02
97 98 2.252260 CGGCGTGCCAAACTGAAG 59.748 61.111 12.06 0.00 35.37 3.02
98 99 2.542907 CGGCGTGCCAAACTGAAGT 61.543 57.895 12.06 0.00 35.37 3.01
99 100 1.733526 GGCGTGCCAAACTGAAGTT 59.266 52.632 5.89 0.00 40.50 2.66
100 101 0.594796 GGCGTGCCAAACTGAAGTTG 60.595 55.000 5.89 0.00 38.44 3.16
101 102 0.594796 GCGTGCCAAACTGAAGTTGG 60.595 55.000 0.00 0.00 38.44 3.77
102 103 0.594796 CGTGCCAAACTGAAGTTGGC 60.595 55.000 18.93 18.93 44.67 4.52
103 104 0.249447 GTGCCAAACTGAAGTTGGCC 60.249 55.000 21.90 11.76 44.26 5.36
104 105 0.396974 TGCCAAACTGAAGTTGGCCT 60.397 50.000 21.90 0.00 44.26 5.19
105 106 0.315251 GCCAAACTGAAGTTGGCCTC 59.685 55.000 15.70 0.00 41.74 4.70
106 107 0.593128 CCAAACTGAAGTTGGCCTCG 59.407 55.000 3.32 0.00 38.44 4.63
107 108 1.308998 CAAACTGAAGTTGGCCTCGT 58.691 50.000 3.32 0.00 38.44 4.18
108 109 1.002468 CAAACTGAAGTTGGCCTCGTG 60.002 52.381 3.32 0.00 38.44 4.35
109 110 0.535102 AACTGAAGTTGGCCTCGTGG 60.535 55.000 3.32 0.00 36.80 4.94
110 111 1.071471 CTGAAGTTGGCCTCGTGGT 59.929 57.895 3.32 0.00 35.27 4.16
111 112 0.951040 CTGAAGTTGGCCTCGTGGTC 60.951 60.000 3.32 0.00 38.74 4.02
112 113 2.027625 GAAGTTGGCCTCGTGGTCG 61.028 63.158 3.32 0.00 41.88 4.79
113 114 2.710724 GAAGTTGGCCTCGTGGTCGT 62.711 60.000 3.32 0.00 41.88 4.34
114 115 2.989055 AAGTTGGCCTCGTGGTCGTG 62.989 60.000 3.32 0.00 41.88 4.35
115 116 4.980805 TTGGCCTCGTGGTCGTGC 62.981 66.667 3.32 0.00 41.88 5.34
117 118 4.681978 GGCCTCGTGGTCGTGCTT 62.682 66.667 5.26 0.00 36.65 3.91
118 119 3.414700 GCCTCGTGGTCGTGCTTG 61.415 66.667 5.26 0.00 38.33 4.01
119 120 3.414700 CCTCGTGGTCGTGCTTGC 61.415 66.667 0.00 0.00 38.33 4.01
120 121 3.414700 CTCGTGGTCGTGCTTGCC 61.415 66.667 0.00 0.00 38.33 4.52
121 122 4.228567 TCGTGGTCGTGCTTGCCA 62.229 61.111 0.00 0.00 38.33 4.92
122 123 4.012895 CGTGGTCGTGCTTGCCAC 62.013 66.667 0.00 0.00 46.61 5.01
129 130 2.412937 GTGCTTGCCACGCTTGTT 59.587 55.556 0.00 0.00 34.22 2.83
130 131 1.945662 GTGCTTGCCACGCTTGTTG 60.946 57.895 0.00 0.00 34.22 3.33
131 132 3.032033 GCTTGCCACGCTTGTTGC 61.032 61.111 0.00 0.00 34.95 4.17
132 133 2.723746 CTTGCCACGCTTGTTGCT 59.276 55.556 0.00 0.00 40.11 3.91
133 134 1.659335 CTTGCCACGCTTGTTGCTG 60.659 57.895 0.00 0.00 40.11 4.41
134 135 3.771568 TTGCCACGCTTGTTGCTGC 62.772 57.895 0.00 0.00 40.11 5.25
140 141 3.663176 GCTTGTTGCTGCGGCTGA 61.663 61.111 20.27 4.41 39.59 4.26
141 142 3.033184 CTTGTTGCTGCGGCTGAA 58.967 55.556 20.27 2.05 39.59 3.02
142 143 1.081641 CTTGTTGCTGCGGCTGAAG 60.082 57.895 20.27 13.38 39.59 3.02
143 144 1.509644 CTTGTTGCTGCGGCTGAAGA 61.510 55.000 20.27 0.60 39.59 2.87
144 145 1.100463 TTGTTGCTGCGGCTGAAGAA 61.100 50.000 20.27 7.58 39.59 2.52
145 146 1.208614 GTTGCTGCGGCTGAAGAAG 59.791 57.895 20.27 0.00 39.59 2.85
155 156 3.963733 CTGAAGAAGCCCATGGTGA 57.036 52.632 11.73 0.00 0.00 4.02
156 157 1.457346 CTGAAGAAGCCCATGGTGAC 58.543 55.000 11.73 0.00 0.00 3.67
157 158 0.321564 TGAAGAAGCCCATGGTGACG 60.322 55.000 11.73 0.00 0.00 4.35
158 159 1.002134 AAGAAGCCCATGGTGACGG 60.002 57.895 11.73 0.00 0.00 4.79
159 160 3.134127 GAAGCCCATGGTGACGGC 61.134 66.667 11.73 6.40 43.35 5.68
177 178 4.814294 GACGGGCTAGGGTGCGTG 62.814 72.222 0.00 0.00 0.00 5.34
183 184 4.373116 CTAGGGTGCGTGCCGTGT 62.373 66.667 3.49 0.00 0.00 4.49
184 185 4.673298 TAGGGTGCGTGCCGTGTG 62.673 66.667 3.49 0.00 0.00 3.82
197 198 3.357079 GTGTGGCGTGGGAGCAAG 61.357 66.667 0.00 0.00 39.27 4.01
198 199 3.872603 TGTGGCGTGGGAGCAAGT 61.873 61.111 0.00 0.00 39.27 3.16
199 200 2.594592 GTGGCGTGGGAGCAAGTT 60.595 61.111 0.00 0.00 39.27 2.66
200 201 2.281484 TGGCGTGGGAGCAAGTTC 60.281 61.111 0.00 0.00 39.27 3.01
201 202 2.032681 GGCGTGGGAGCAAGTTCT 59.967 61.111 0.00 0.00 39.27 3.01
202 203 1.295423 GGCGTGGGAGCAAGTTCTA 59.705 57.895 0.00 0.00 39.27 2.10
203 204 0.741221 GGCGTGGGAGCAAGTTCTAG 60.741 60.000 0.00 0.00 39.27 2.43
204 205 0.246635 GCGTGGGAGCAAGTTCTAGA 59.753 55.000 0.00 0.00 37.05 2.43
205 206 1.134670 GCGTGGGAGCAAGTTCTAGAT 60.135 52.381 0.00 0.00 37.05 1.98
206 207 2.544685 CGTGGGAGCAAGTTCTAGATG 58.455 52.381 0.00 0.00 0.00 2.90
207 208 2.093973 CGTGGGAGCAAGTTCTAGATGT 60.094 50.000 0.00 0.00 0.00 3.06
208 209 3.265791 GTGGGAGCAAGTTCTAGATGTG 58.734 50.000 0.00 0.00 0.00 3.21
209 210 2.237143 TGGGAGCAAGTTCTAGATGTGG 59.763 50.000 0.00 0.00 0.00 4.17
210 211 2.501723 GGGAGCAAGTTCTAGATGTGGA 59.498 50.000 0.00 0.00 0.00 4.02
211 212 3.135530 GGGAGCAAGTTCTAGATGTGGAT 59.864 47.826 0.00 0.00 0.00 3.41
212 213 4.384647 GGGAGCAAGTTCTAGATGTGGATT 60.385 45.833 0.00 0.00 0.00 3.01
213 214 4.574013 GGAGCAAGTTCTAGATGTGGATTG 59.426 45.833 0.00 0.00 0.00 2.67
214 215 4.521146 AGCAAGTTCTAGATGTGGATTGG 58.479 43.478 0.00 0.00 0.00 3.16
215 216 4.018960 AGCAAGTTCTAGATGTGGATTGGT 60.019 41.667 0.00 0.00 0.00 3.67
216 217 4.702131 GCAAGTTCTAGATGTGGATTGGTT 59.298 41.667 0.00 0.00 0.00 3.67
217 218 5.183904 GCAAGTTCTAGATGTGGATTGGTTT 59.816 40.000 0.00 0.00 0.00 3.27
218 219 6.623767 GCAAGTTCTAGATGTGGATTGGTTTC 60.624 42.308 0.00 0.00 0.00 2.78
219 220 5.178797 AGTTCTAGATGTGGATTGGTTTCG 58.821 41.667 0.00 0.00 0.00 3.46
220 221 4.819105 TCTAGATGTGGATTGGTTTCGT 57.181 40.909 0.00 0.00 0.00 3.85
221 222 4.503910 TCTAGATGTGGATTGGTTTCGTG 58.496 43.478 0.00 0.00 0.00 4.35
222 223 3.417069 AGATGTGGATTGGTTTCGTGA 57.583 42.857 0.00 0.00 0.00 4.35
223 224 3.338249 AGATGTGGATTGGTTTCGTGAG 58.662 45.455 0.00 0.00 0.00 3.51
224 225 2.920724 TGTGGATTGGTTTCGTGAGA 57.079 45.000 0.00 0.00 39.20 3.27
501 502 4.590487 AAGGACGTGGCATGTACG 57.410 55.556 16.15 18.66 46.31 3.67
509 510 1.202256 CGTGGCATGTACGCTTCTAGA 60.202 52.381 10.78 0.00 34.56 2.43
510 511 2.543861 CGTGGCATGTACGCTTCTAGAT 60.544 50.000 10.78 0.00 34.56 1.98
512 513 1.795286 GGCATGTACGCTTCTAGATGC 59.205 52.381 18.30 18.30 40.86 3.91
516 517 4.554292 CATGTACGCTTCTAGATGCTGAT 58.446 43.478 23.62 13.83 0.00 2.90
526 527 1.077212 GATGCTGATGTGTGGGCCT 60.077 57.895 4.53 0.00 0.00 5.19
527 528 0.682209 GATGCTGATGTGTGGGCCTT 60.682 55.000 4.53 0.00 0.00 4.35
530 531 0.749454 GCTGATGTGTGGGCCTTAGG 60.749 60.000 4.53 0.00 0.00 2.69
538 539 1.083895 TGGGCCTTAGGTGGATGGA 59.916 57.895 4.53 0.00 0.00 3.41
541 542 1.140312 GGCCTTAGGTGGATGGATGA 58.860 55.000 0.00 0.00 0.00 2.92
542 543 1.072965 GGCCTTAGGTGGATGGATGAG 59.927 57.143 0.00 0.00 0.00 2.90
550 551 1.227674 GGATGGATGAGGCCGACAC 60.228 63.158 7.76 3.29 0.00 3.67
612 613 2.126965 GTGTCCGTCTCGTGTCCG 60.127 66.667 0.00 0.00 0.00 4.79
616 617 1.301637 TCCGTCTCGTGTCCGTGTA 60.302 57.895 0.00 0.00 35.01 2.90
627 628 1.795872 TGTCCGTGTAGACGCAAATTG 59.204 47.619 6.94 0.00 44.68 2.32
628 629 1.127951 GTCCGTGTAGACGCAAATTGG 59.872 52.381 6.94 0.00 44.68 3.16
630 631 1.127951 CCGTGTAGACGCAAATTGGAC 59.872 52.381 6.94 0.00 44.68 4.02
631 632 1.201769 CGTGTAGACGCAAATTGGACG 60.202 52.381 0.00 0.00 39.10 4.79
632 633 0.793861 TGTAGACGCAAATTGGACGC 59.206 50.000 0.00 0.00 0.00 5.19
633 634 0.793861 GTAGACGCAAATTGGACGCA 59.206 50.000 0.00 0.00 0.00 5.24
634 635 1.195900 GTAGACGCAAATTGGACGCAA 59.804 47.619 0.00 0.00 0.00 4.85
635 636 0.665835 AGACGCAAATTGGACGCAAA 59.334 45.000 0.00 0.00 0.00 3.68
636 637 1.269448 AGACGCAAATTGGACGCAAAT 59.731 42.857 0.00 0.00 0.00 2.32
637 638 2.058057 GACGCAAATTGGACGCAAATT 58.942 42.857 0.00 0.00 0.00 1.82
638 639 2.474735 GACGCAAATTGGACGCAAATTT 59.525 40.909 0.00 0.75 37.64 1.82
650 651 1.634702 GCAAATTTGCGCCGGAAATA 58.365 45.000 26.15 0.00 45.11 1.40
652 653 1.581602 CAAATTTGCGCCGGAAATACG 59.418 47.619 16.89 7.53 0.00 3.06
654 655 0.375803 ATTTGCGCCGGAAATACGTC 59.624 50.000 15.09 0.00 0.00 4.34
661 662 1.536331 GCCGGAAATACGTCCAAACAA 59.464 47.619 5.05 0.00 37.56 2.83
669 670 2.931512 ACGTCCAAACAAACACCAAG 57.068 45.000 0.00 0.00 0.00 3.61
671 672 1.134175 CGTCCAAACAAACACCAAGCT 59.866 47.619 0.00 0.00 0.00 3.74
680 681 3.197549 ACAAACACCAAGCTGACCAAATT 59.802 39.130 0.00 0.00 0.00 1.82
682 683 3.457610 ACACCAAGCTGACCAAATTTG 57.542 42.857 11.40 11.40 0.00 2.32
684 685 1.269726 ACCAAGCTGACCAAATTTGCG 60.270 47.619 12.92 8.64 0.00 4.85
685 686 1.000385 CCAAGCTGACCAAATTTGCGA 60.000 47.619 12.92 0.00 0.00 5.10
703 704 2.707039 ATGCGTCGGCGTATTTGC 59.293 55.556 12.58 5.73 40.38 3.68
704 705 3.150410 ATGCGTCGGCGTATTTGCG 62.150 57.895 12.58 4.72 40.38 4.85
705 706 3.845472 GCGTCGGCGTATTTGCGT 61.845 61.111 12.58 0.00 40.81 5.24
706 707 2.507193 GCGTCGGCGTATTTGCGTA 61.507 57.895 12.58 0.00 40.81 4.42
707 708 1.814211 GCGTCGGCGTATTTGCGTAT 61.814 55.000 12.58 0.00 40.81 3.06
718 719 0.241481 TTTGCGTATTTGGGCCGTTC 59.759 50.000 0.00 0.00 0.00 3.95
719 720 0.889638 TTGCGTATTTGGGCCGTTCA 60.890 50.000 0.00 0.00 0.00 3.18
734 735 3.057019 CCGTTCATTCTGTCTGTTTCGA 58.943 45.455 0.00 0.00 0.00 3.71
735 736 3.120991 CCGTTCATTCTGTCTGTTTCGAC 60.121 47.826 0.00 0.00 34.52 4.20
737 738 3.744238 TCATTCTGTCTGTTTCGACCA 57.256 42.857 0.00 0.00 32.97 4.02
738 739 3.653344 TCATTCTGTCTGTTTCGACCAG 58.347 45.455 5.15 5.15 32.97 4.00
739 740 3.069586 TCATTCTGTCTGTTTCGACCAGT 59.930 43.478 10.24 0.00 32.97 4.00
741 742 4.866508 TTCTGTCTGTTTCGACCAGTAT 57.133 40.909 10.24 0.00 32.97 2.12
757 768 3.273434 CAGTATGGACCAGATGTGTTGG 58.727 50.000 0.00 0.00 41.60 3.77
758 769 2.017049 GTATGGACCAGATGTGTTGGC 58.983 52.381 0.00 0.00 39.39 4.52
759 770 0.405198 ATGGACCAGATGTGTTGGCA 59.595 50.000 0.00 0.00 39.39 4.92
760 771 0.537143 TGGACCAGATGTGTTGGCAC 60.537 55.000 0.00 0.00 45.44 5.01
777 788 0.250553 CACGTTGGAGTTGGCCCTAA 60.251 55.000 0.00 0.00 0.00 2.69
819 848 7.169982 TGTGAACTATTTTTAAACAAATGCCGG 59.830 33.333 0.00 0.00 0.00 6.13
824 853 7.929245 ACTATTTTTAAACAAATGCCGGAAACT 59.071 29.630 5.05 0.00 0.00 2.66
825 854 9.413048 CTATTTTTAAACAAATGCCGGAAACTA 57.587 29.630 5.05 0.00 0.00 2.24
826 855 8.664211 ATTTTTAAACAAATGCCGGAAACTAA 57.336 26.923 5.05 0.00 0.00 2.24
917 970 3.909086 AAGCTCCCTTGTGCTCCGC 62.909 63.158 0.00 0.00 40.28 5.54
919 972 4.020617 CTCCCTTGTGCTCCGCCA 62.021 66.667 0.00 0.00 0.00 5.69
938 993 1.154205 ACAAGTGTCAGCGTGAGTGC 61.154 55.000 0.00 0.00 0.00 4.40
944 999 1.734117 TCAGCGTGAGTGCGACATG 60.734 57.895 0.00 0.00 40.67 3.21
1035 1090 2.237392 CGTCTCCATTCCCCTTCTTCTT 59.763 50.000 0.00 0.00 0.00 2.52
1041 1096 5.570320 TCCATTCCCCTTCTTCTTAAACAG 58.430 41.667 0.00 0.00 0.00 3.16
1101 1156 2.428890 CGCTGATTCTTCCAGTACTCCT 59.571 50.000 0.00 0.00 34.29 3.69
1735 1838 4.639776 CTCCAGCAGCAGCAGATT 57.360 55.556 3.17 0.00 45.49 2.40
1798 1931 2.032681 GGCGACCTGTTGGAGCTT 59.967 61.111 0.00 0.00 39.23 3.74
1960 2099 3.865745 GCTGCTTGCTCGACTAATTTAGA 59.134 43.478 10.39 0.00 38.95 2.10
1967 2107 7.275999 GCTTGCTCGACTAATTTAGAACTACTT 59.724 37.037 10.39 0.00 0.00 2.24
1994 2153 9.793259 TCAAGTTGTAGATTTAGGAAGAAACAT 57.207 29.630 2.11 0.00 0.00 2.71
2013 2172 5.242795 ACATACTAGGCAGTTTGTTCCTT 57.757 39.130 0.00 0.00 42.21 3.36
2014 2173 5.246307 ACATACTAGGCAGTTTGTTCCTTC 58.754 41.667 0.00 0.00 42.21 3.46
2015 2174 3.857157 ACTAGGCAGTTTGTTCCTTCA 57.143 42.857 0.00 0.00 0.00 3.02
2017 2176 4.729868 ACTAGGCAGTTTGTTCCTTCATT 58.270 39.130 0.00 0.00 0.00 2.57
2022 2182 5.010012 AGGCAGTTTGTTCCTTCATTTGTAG 59.990 40.000 0.00 0.00 0.00 2.74
2060 2220 2.433436 CCGGTTTCTACTTTTGGGGAG 58.567 52.381 0.00 0.00 0.00 4.30
2069 2229 1.636003 ACTTTTGGGGAGAAGGGCTAG 59.364 52.381 0.00 0.00 0.00 3.42
2083 2252 6.292150 AGAAGGGCTAGATTGCTTAATACAC 58.708 40.000 0.00 0.00 0.00 2.90
2084 2253 4.974399 AGGGCTAGATTGCTTAATACACC 58.026 43.478 0.00 0.00 0.00 4.16
2107 2276 5.874810 CCAATTATTGGTTCTGAACTCGAGA 59.125 40.000 21.68 5.26 45.93 4.04
2188 2362 4.055360 CACATCAAAGGACGTCACTGTTA 58.945 43.478 18.91 0.00 0.00 2.41
2211 2385 6.469782 AGTTGACAACCTGTGAAAATGATT 57.530 33.333 14.72 0.00 0.00 2.57
2224 2398 3.525268 AAATGATTGATTTGGACGGCC 57.475 42.857 0.00 0.00 32.69 6.13
2241 2415 2.570135 GGCCTTGCAAACAAAAATCCA 58.430 42.857 0.00 0.00 34.74 3.41
2284 2458 9.445786 TTTTATTTTATAAGTAATCAGCGCTGC 57.554 29.630 32.44 18.18 0.00 5.25
2285 2459 6.867662 ATTTTATAAGTAATCAGCGCTGCT 57.132 33.333 32.44 21.36 40.77 4.24
2286 2460 7.962964 ATTTTATAAGTAATCAGCGCTGCTA 57.037 32.000 32.44 21.70 36.40 3.49
2287 2461 7.962964 TTTTATAAGTAATCAGCGCTGCTAT 57.037 32.000 32.44 18.91 36.40 2.97
2288 2462 9.653287 ATTTTATAAGTAATCAGCGCTGCTATA 57.347 29.630 32.44 20.31 36.40 1.31
2289 2463 8.462143 TTTATAAGTAATCAGCGCTGCTATAC 57.538 34.615 32.44 28.50 36.40 1.47
2290 2464 4.322080 AAGTAATCAGCGCTGCTATACA 57.678 40.909 32.44 14.85 36.40 2.29
2291 2465 3.643763 AGTAATCAGCGCTGCTATACAC 58.356 45.455 32.44 20.15 36.40 2.90
2292 2466 2.602257 AATCAGCGCTGCTATACACA 57.398 45.000 32.44 13.24 36.40 3.72
2293 2467 1.858091 ATCAGCGCTGCTATACACAC 58.142 50.000 32.44 0.00 36.40 3.82
2294 2468 0.525455 TCAGCGCTGCTATACACACG 60.525 55.000 32.44 4.42 36.40 4.49
2295 2469 0.525455 CAGCGCTGCTATACACACGA 60.525 55.000 26.68 0.00 36.40 4.35
2296 2470 0.385751 AGCGCTGCTATACACACGAT 59.614 50.000 10.39 0.00 36.99 3.73
2297 2471 0.504384 GCGCTGCTATACACACGATG 59.496 55.000 0.00 0.00 0.00 3.84
2298 2472 1.131771 CGCTGCTATACACACGATGG 58.868 55.000 0.00 0.00 0.00 3.51
2299 2473 1.536072 CGCTGCTATACACACGATGGT 60.536 52.381 0.00 0.00 0.00 3.55
2308 2482 3.549467 CACGATGGTGTGTGGACG 58.451 61.111 0.00 0.00 39.38 4.79
2309 2483 1.006688 CACGATGGTGTGTGGACGA 60.007 57.895 0.00 0.00 39.38 4.20
2310 2484 0.389817 CACGATGGTGTGTGGACGAT 60.390 55.000 0.00 0.00 39.38 3.73
2311 2485 0.320374 ACGATGGTGTGTGGACGATT 59.680 50.000 0.00 0.00 0.00 3.34
2312 2486 0.999406 CGATGGTGTGTGGACGATTC 59.001 55.000 0.00 0.00 0.00 2.52
2313 2487 1.369625 GATGGTGTGTGGACGATTCC 58.630 55.000 0.00 0.00 43.19 3.01
2314 2488 0.984230 ATGGTGTGTGGACGATTCCT 59.016 50.000 0.00 0.00 43.31 3.36
2315 2489 0.034756 TGGTGTGTGGACGATTCCTG 59.965 55.000 0.00 0.00 43.31 3.86
2316 2490 0.320374 GGTGTGTGGACGATTCCTGA 59.680 55.000 0.00 0.00 43.31 3.86
2317 2491 1.270625 GGTGTGTGGACGATTCCTGAA 60.271 52.381 0.00 0.00 43.31 3.02
2318 2492 1.798813 GTGTGTGGACGATTCCTGAAC 59.201 52.381 0.00 0.00 43.31 3.18
2319 2493 1.068474 GTGTGGACGATTCCTGAACG 58.932 55.000 0.00 0.00 43.31 3.95
2320 2494 0.963225 TGTGGACGATTCCTGAACGA 59.037 50.000 0.00 0.00 43.31 3.85
2321 2495 1.336517 TGTGGACGATTCCTGAACGAC 60.337 52.381 0.00 0.00 43.31 4.34
2322 2496 0.963225 TGGACGATTCCTGAACGACA 59.037 50.000 0.00 0.00 43.31 4.35
2323 2497 1.341852 TGGACGATTCCTGAACGACAA 59.658 47.619 0.00 0.00 43.31 3.18
2324 2498 1.725164 GGACGATTCCTGAACGACAAC 59.275 52.381 0.00 0.00 39.13 3.32
2325 2499 1.385743 GACGATTCCTGAACGACAACG 59.614 52.381 0.00 0.00 45.75 4.10
2326 2500 0.093026 CGATTCCTGAACGACAACGC 59.907 55.000 0.00 0.00 43.96 4.84
2327 2501 1.144969 GATTCCTGAACGACAACGCA 58.855 50.000 0.00 0.00 43.96 5.24
2328 2502 1.126846 GATTCCTGAACGACAACGCAG 59.873 52.381 0.00 0.00 43.96 5.18
2329 2503 0.103390 TTCCTGAACGACAACGCAGA 59.897 50.000 0.00 0.00 43.96 4.26
2330 2504 0.317160 TCCTGAACGACAACGCAGAT 59.683 50.000 0.00 0.00 43.96 2.90
2331 2505 0.716108 CCTGAACGACAACGCAGATC 59.284 55.000 0.00 0.00 43.96 2.75
2332 2506 1.418373 CTGAACGACAACGCAGATCA 58.582 50.000 0.00 0.00 43.96 2.92
2333 2507 1.792367 CTGAACGACAACGCAGATCAA 59.208 47.619 0.00 0.00 43.96 2.57
2334 2508 1.525197 TGAACGACAACGCAGATCAAC 59.475 47.619 0.00 0.00 43.96 3.18
2335 2509 1.792949 GAACGACAACGCAGATCAACT 59.207 47.619 0.00 0.00 43.96 3.16
2336 2510 1.419374 ACGACAACGCAGATCAACTC 58.581 50.000 0.00 0.00 43.96 3.01
2337 2511 1.269569 ACGACAACGCAGATCAACTCA 60.270 47.619 0.00 0.00 43.96 3.41
2338 2512 1.995484 CGACAACGCAGATCAACTCAT 59.005 47.619 0.00 0.00 0.00 2.90
2339 2513 2.028523 CGACAACGCAGATCAACTCATC 59.971 50.000 0.00 0.00 0.00 2.92
2340 2514 2.349886 GACAACGCAGATCAACTCATCC 59.650 50.000 0.00 0.00 0.00 3.51
2341 2515 2.289631 ACAACGCAGATCAACTCATCCA 60.290 45.455 0.00 0.00 0.00 3.41
2342 2516 2.941064 CAACGCAGATCAACTCATCCAT 59.059 45.455 0.00 0.00 0.00 3.41
2343 2517 2.558378 ACGCAGATCAACTCATCCATG 58.442 47.619 0.00 0.00 0.00 3.66
2344 2518 1.263484 CGCAGATCAACTCATCCATGC 59.737 52.381 0.00 0.00 0.00 4.06
2345 2519 2.294979 GCAGATCAACTCATCCATGCA 58.705 47.619 0.00 0.00 32.79 3.96
2346 2520 2.033049 GCAGATCAACTCATCCATGCAC 59.967 50.000 0.00 0.00 32.79 4.57
2347 2521 3.275999 CAGATCAACTCATCCATGCACA 58.724 45.455 0.00 0.00 0.00 4.57
2348 2522 3.692593 CAGATCAACTCATCCATGCACAA 59.307 43.478 0.00 0.00 0.00 3.33
2349 2523 3.693085 AGATCAACTCATCCATGCACAAC 59.307 43.478 0.00 0.00 0.00 3.32
2350 2524 2.861274 TCAACTCATCCATGCACAACA 58.139 42.857 0.00 0.00 0.00 3.33
2351 2525 2.815503 TCAACTCATCCATGCACAACAG 59.184 45.455 0.00 0.00 0.00 3.16
2352 2526 2.555325 CAACTCATCCATGCACAACAGT 59.445 45.455 0.00 0.00 0.00 3.55
2353 2527 3.701205 ACTCATCCATGCACAACAGTA 57.299 42.857 0.00 0.00 0.00 2.74
2354 2528 4.019792 ACTCATCCATGCACAACAGTAA 57.980 40.909 0.00 0.00 0.00 2.24
2355 2529 4.397420 ACTCATCCATGCACAACAGTAAA 58.603 39.130 0.00 0.00 0.00 2.01
2356 2530 4.456911 ACTCATCCATGCACAACAGTAAAG 59.543 41.667 0.00 0.00 0.00 1.85
2357 2531 4.397420 TCATCCATGCACAACAGTAAAGT 58.603 39.130 0.00 0.00 0.00 2.66
2358 2532 4.216042 TCATCCATGCACAACAGTAAAGTG 59.784 41.667 0.00 0.00 36.39 3.16
2359 2533 3.814625 TCCATGCACAACAGTAAAGTGA 58.185 40.909 0.00 0.00 35.33 3.41
2360 2534 4.203226 TCCATGCACAACAGTAAAGTGAA 58.797 39.130 0.00 0.00 35.33 3.18
2361 2535 4.275689 TCCATGCACAACAGTAAAGTGAAG 59.724 41.667 0.00 0.00 35.33 3.02
2362 2536 3.691049 TGCACAACAGTAAAGTGAAGC 57.309 42.857 0.00 0.00 35.33 3.86
2363 2537 3.013219 TGCACAACAGTAAAGTGAAGCA 58.987 40.909 0.00 0.00 35.33 3.91
2364 2538 3.065233 TGCACAACAGTAAAGTGAAGCAG 59.935 43.478 0.00 0.00 35.33 4.24
2365 2539 3.312421 GCACAACAGTAAAGTGAAGCAGA 59.688 43.478 0.00 0.00 35.33 4.26
2366 2540 4.786609 GCACAACAGTAAAGTGAAGCAGAC 60.787 45.833 0.00 0.00 35.33 3.51
2367 2541 3.555956 ACAACAGTAAAGTGAAGCAGACG 59.444 43.478 0.00 0.00 0.00 4.18
2368 2542 2.755650 ACAGTAAAGTGAAGCAGACGG 58.244 47.619 0.00 0.00 0.00 4.79
2369 2543 1.461127 CAGTAAAGTGAAGCAGACGGC 59.539 52.381 0.00 0.00 45.30 5.68
2378 2552 3.190878 GCAGACGGCTGGATTTGG 58.809 61.111 22.33 0.00 42.53 3.28
2379 2553 3.056313 GCAGACGGCTGGATTTGGC 62.056 63.158 22.33 0.00 42.53 4.52
2380 2554 2.044946 AGACGGCTGGATTTGGCC 60.045 61.111 0.00 0.00 44.43 5.36
2384 2558 3.508840 GGCTGGATTTGGCCGTCG 61.509 66.667 0.00 0.00 38.91 5.12
2385 2559 2.746277 GCTGGATTTGGCCGTCGT 60.746 61.111 0.00 0.00 0.00 4.34
2386 2560 2.750888 GCTGGATTTGGCCGTCGTC 61.751 63.158 0.00 0.00 0.00 4.20
2387 2561 1.079127 CTGGATTTGGCCGTCGTCT 60.079 57.895 0.00 0.00 0.00 4.18
2388 2562 1.079405 TGGATTTGGCCGTCGTCTC 60.079 57.895 0.00 0.00 0.00 3.36
2389 2563 1.814169 GGATTTGGCCGTCGTCTCC 60.814 63.158 0.00 0.00 0.00 3.71
2390 2564 1.218316 GATTTGGCCGTCGTCTCCT 59.782 57.895 0.00 0.00 0.00 3.69
2391 2565 0.391263 GATTTGGCCGTCGTCTCCTT 60.391 55.000 0.00 0.00 0.00 3.36
2392 2566 0.673644 ATTTGGCCGTCGTCTCCTTG 60.674 55.000 0.00 0.00 0.00 3.61
2393 2567 2.035237 TTTGGCCGTCGTCTCCTTGT 62.035 55.000 0.00 0.00 0.00 3.16
2394 2568 2.126031 GGCCGTCGTCTCCTTGTC 60.126 66.667 0.00 0.00 0.00 3.18
2395 2569 2.504244 GCCGTCGTCTCCTTGTCG 60.504 66.667 0.00 0.00 0.00 4.35
2396 2570 2.952245 CCGTCGTCTCCTTGTCGT 59.048 61.111 0.00 0.00 0.00 4.34
2397 2571 1.442184 CCGTCGTCTCCTTGTCGTG 60.442 63.158 0.00 0.00 0.00 4.35
2398 2572 2.081212 CGTCGTCTCCTTGTCGTGC 61.081 63.158 0.00 0.00 0.00 5.34
2399 2573 1.007734 GTCGTCTCCTTGTCGTGCA 60.008 57.895 0.00 0.00 0.00 4.57
2400 2574 1.007734 TCGTCTCCTTGTCGTGCAC 60.008 57.895 6.82 6.82 0.00 4.57
2401 2575 2.365068 CGTCTCCTTGTCGTGCACG 61.365 63.158 32.76 32.76 41.45 5.34
2402 2576 2.355837 TCTCCTTGTCGTGCACGC 60.356 61.111 33.63 26.73 39.60 5.34
2403 2577 2.661537 CTCCTTGTCGTGCACGCA 60.662 61.111 33.63 28.85 39.60 5.24
2404 2578 2.661537 TCCTTGTCGTGCACGCAG 60.662 61.111 33.63 25.63 39.60 5.18
2406 2580 1.663388 CCTTGTCGTGCACGCAGTA 60.663 57.895 33.63 14.65 41.61 2.74
2407 2581 1.014044 CCTTGTCGTGCACGCAGTAT 61.014 55.000 33.63 0.00 41.61 2.12
2408 2582 0.366871 CTTGTCGTGCACGCAGTATC 59.633 55.000 33.63 17.93 41.61 2.24
2409 2583 1.341369 TTGTCGTGCACGCAGTATCG 61.341 55.000 33.63 8.67 41.61 2.92
2410 2584 1.800315 GTCGTGCACGCAGTATCGT 60.800 57.895 33.63 0.00 41.61 3.73
2411 2585 1.513373 TCGTGCACGCAGTATCGTC 60.513 57.895 33.63 0.00 41.61 4.20
2412 2586 1.514228 CGTGCACGCAGTATCGTCT 60.514 57.895 28.16 0.00 41.61 4.18
2413 2587 1.071019 CGTGCACGCAGTATCGTCTT 61.071 55.000 28.16 0.00 41.61 3.01
2414 2588 1.068474 GTGCACGCAGTATCGTCTTT 58.932 50.000 0.00 0.00 41.61 2.52
2415 2589 2.256174 GTGCACGCAGTATCGTCTTTA 58.744 47.619 0.00 0.00 41.61 1.85
2416 2590 2.027688 GTGCACGCAGTATCGTCTTTAC 59.972 50.000 0.00 0.00 41.61 2.01
2417 2591 2.256174 GCACGCAGTATCGTCTTTACA 58.744 47.619 0.00 0.00 41.61 2.41
2418 2592 2.279136 GCACGCAGTATCGTCTTTACAG 59.721 50.000 0.00 0.00 41.61 2.74
2419 2593 2.279136 CACGCAGTATCGTCTTTACAGC 59.721 50.000 0.00 0.00 41.61 4.40
2420 2594 2.094906 ACGCAGTATCGTCTTTACAGCA 60.095 45.455 0.00 0.00 41.94 4.41
2421 2595 2.531912 CGCAGTATCGTCTTTACAGCAG 59.468 50.000 0.00 0.00 33.22 4.24
2422 2596 3.512680 GCAGTATCGTCTTTACAGCAGT 58.487 45.455 0.00 0.00 33.67 4.40
2423 2597 3.927142 GCAGTATCGTCTTTACAGCAGTT 59.073 43.478 0.00 0.00 33.67 3.16
2424 2598 4.389077 GCAGTATCGTCTTTACAGCAGTTT 59.611 41.667 0.00 0.00 33.67 2.66
2425 2599 5.444745 GCAGTATCGTCTTTACAGCAGTTTC 60.445 44.000 0.00 0.00 33.67 2.78
2426 2600 4.857588 AGTATCGTCTTTACAGCAGTTTCG 59.142 41.667 0.00 0.00 0.00 3.46
2427 2601 3.358707 TCGTCTTTACAGCAGTTTCGA 57.641 42.857 0.00 0.00 0.00 3.71
2428 2602 3.909430 TCGTCTTTACAGCAGTTTCGAT 58.091 40.909 0.00 0.00 0.00 3.59
2429 2603 5.050644 TCGTCTTTACAGCAGTTTCGATA 57.949 39.130 0.00 0.00 0.00 2.92
2430 2604 5.463286 TCGTCTTTACAGCAGTTTCGATAA 58.537 37.500 0.00 0.00 0.00 1.75
2431 2605 5.571741 TCGTCTTTACAGCAGTTTCGATAAG 59.428 40.000 0.00 0.00 0.00 1.73
2432 2606 5.345202 CGTCTTTACAGCAGTTTCGATAAGT 59.655 40.000 0.00 0.00 0.00 2.24
2433 2607 6.525628 CGTCTTTACAGCAGTTTCGATAAGTA 59.474 38.462 0.00 0.00 0.00 2.24
2434 2608 7.061441 CGTCTTTACAGCAGTTTCGATAAGTAA 59.939 37.037 0.00 0.00 0.00 2.24
2435 2609 8.870879 GTCTTTACAGCAGTTTCGATAAGTAAT 58.129 33.333 0.00 0.00 0.00 1.89
2436 2610 9.431887 TCTTTACAGCAGTTTCGATAAGTAATT 57.568 29.630 0.00 0.00 0.00 1.40
2440 2614 8.366671 ACAGCAGTTTCGATAAGTAATTATCC 57.633 34.615 15.33 3.75 31.82 2.59
2441 2615 8.204836 ACAGCAGTTTCGATAAGTAATTATCCT 58.795 33.333 15.33 5.71 31.82 3.24
2442 2616 9.692749 CAGCAGTTTCGATAAGTAATTATCCTA 57.307 33.333 15.33 3.60 31.82 2.94
2446 2620 8.355169 AGTTTCGATAAGTAATTATCCTACGCA 58.645 33.333 15.33 0.00 31.82 5.24
2526 2700 0.324275 TTTGGGTAGAGCAATGGGGC 60.324 55.000 0.00 0.00 0.00 5.80
2530 2704 1.523938 GTAGAGCAATGGGGCCGTC 60.524 63.158 0.00 0.00 0.00 4.79
2546 2720 2.203788 TCTTCGGGCCTGTCCTGT 60.204 61.111 12.43 0.00 42.13 4.00
2614 2788 1.672356 CTGTCCGCCAGGGTCAAAG 60.672 63.158 0.00 0.00 37.54 2.77
2634 2808 8.031277 GTCAAAGATGCCCATATTTTCATATCC 58.969 37.037 0.00 0.00 30.64 2.59
2649 2824 5.781210 TCATATCCAAACAAGTTTGCACA 57.219 34.783 17.82 6.45 46.25 4.57
2963 3143 1.869574 CTGTCATCACGCTCGTCCG 60.870 63.158 0.00 0.00 0.00 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.299850 CTGCTGTTGTCGGACGTGA 60.300 57.895 0.00 0.00 0.00 4.35
3 4 2.356313 AGCTGCTGTTGTCGGACG 60.356 61.111 0.00 0.00 0.00 4.79
4 5 2.320587 CCAGCTGCTGTTGTCGGAC 61.321 63.158 26.41 0.00 0.00 4.79
7 8 1.284657 CTATCCAGCTGCTGTTGTCG 58.715 55.000 26.41 12.10 0.00 4.35
8 9 1.661341 CCTATCCAGCTGCTGTTGTC 58.339 55.000 26.41 0.00 0.00 3.18
9 10 0.254178 CCCTATCCAGCTGCTGTTGT 59.746 55.000 26.41 14.73 0.00 3.32
10 11 0.254178 ACCCTATCCAGCTGCTGTTG 59.746 55.000 26.41 13.51 0.00 3.33
11 12 0.254178 CACCCTATCCAGCTGCTGTT 59.746 55.000 26.41 16.44 0.00 3.16
12 13 1.910722 CACCCTATCCAGCTGCTGT 59.089 57.895 26.41 12.91 0.00 4.40
13 14 1.525535 GCACCCTATCCAGCTGCTG 60.526 63.158 22.44 22.44 0.00 4.41
14 15 1.692042 AGCACCCTATCCAGCTGCT 60.692 57.895 8.66 0.00 35.72 4.24
15 16 1.227793 GAGCACCCTATCCAGCTGC 60.228 63.158 8.66 0.00 37.48 5.25
16 17 1.449353 GGAGCACCCTATCCAGCTG 59.551 63.158 6.78 6.78 37.48 4.24
17 18 3.978164 GGAGCACCCTATCCAGCT 58.022 61.111 0.00 0.00 40.60 4.24
27 28 1.296715 CACTACCACTGGGAGCACC 59.703 63.158 7.29 0.00 38.05 5.01
28 29 1.376037 GCACTACCACTGGGAGCAC 60.376 63.158 7.29 0.00 38.05 4.40
29 30 1.200760 ATGCACTACCACTGGGAGCA 61.201 55.000 7.29 1.70 38.05 4.26
30 31 0.830648 TATGCACTACCACTGGGAGC 59.169 55.000 7.29 0.00 38.05 4.70
31 32 2.224378 CCATATGCACTACCACTGGGAG 60.224 54.545 5.66 5.66 38.05 4.30
32 33 1.768275 CCATATGCACTACCACTGGGA 59.232 52.381 0.00 0.00 38.05 4.37
33 34 1.490490 ACCATATGCACTACCACTGGG 59.510 52.381 0.00 0.00 41.29 4.45
34 35 2.564771 CACCATATGCACTACCACTGG 58.435 52.381 0.00 0.00 0.00 4.00
46 47 5.765176 CAATACATTCTGGTGCACCATATG 58.235 41.667 36.03 36.03 46.46 1.78
47 48 4.279169 GCAATACATTCTGGTGCACCATAT 59.721 41.667 37.66 28.55 46.46 1.78
48 49 3.631686 GCAATACATTCTGGTGCACCATA 59.368 43.478 37.66 28.49 46.46 2.74
49 50 2.428171 GCAATACATTCTGGTGCACCAT 59.572 45.455 37.66 24.92 46.46 3.55
50 51 1.818060 GCAATACATTCTGGTGCACCA 59.182 47.619 35.49 35.49 45.30 4.17
51 52 1.134946 GGCAATACATTCTGGTGCACC 59.865 52.381 29.67 29.67 36.93 5.01
52 53 1.202177 CGGCAATACATTCTGGTGCAC 60.202 52.381 8.80 8.80 36.93 4.57
53 54 1.093972 CGGCAATACATTCTGGTGCA 58.906 50.000 0.00 0.00 36.93 4.57
54 55 0.381801 CCGGCAATACATTCTGGTGC 59.618 55.000 0.00 0.00 34.42 5.01
55 56 0.381801 GCCGGCAATACATTCTGGTG 59.618 55.000 24.80 0.00 0.00 4.17
56 57 0.751643 GGCCGGCAATACATTCTGGT 60.752 55.000 30.85 0.00 0.00 4.00
57 58 1.785041 CGGCCGGCAATACATTCTGG 61.785 60.000 30.85 0.00 0.00 3.86
58 59 0.813610 TCGGCCGGCAATACATTCTG 60.814 55.000 30.85 0.00 0.00 3.02
59 60 0.532862 CTCGGCCGGCAATACATTCT 60.533 55.000 30.85 0.00 0.00 2.40
60 61 1.507141 CCTCGGCCGGCAATACATTC 61.507 60.000 30.85 6.91 0.00 2.67
61 62 1.525995 CCTCGGCCGGCAATACATT 60.526 57.895 30.85 0.00 0.00 2.71
62 63 2.111043 CCTCGGCCGGCAATACAT 59.889 61.111 30.85 0.00 0.00 2.29
79 80 3.879351 CTTCAGTTTGGCACGCCGC 62.879 63.158 3.13 0.00 39.42 6.53
80 81 2.058829 AACTTCAGTTTGGCACGCCG 62.059 55.000 3.13 0.00 39.42 6.46
81 82 0.594796 CAACTTCAGTTTGGCACGCC 60.595 55.000 0.00 0.00 35.83 5.68
82 83 0.594796 CCAACTTCAGTTTGGCACGC 60.595 55.000 0.00 0.00 35.83 5.34
83 84 0.594796 GCCAACTTCAGTTTGGCACG 60.595 55.000 18.93 0.00 44.27 5.34
84 85 0.249447 GGCCAACTTCAGTTTGGCAC 60.249 55.000 23.67 11.99 45.42 5.01
85 86 0.396974 AGGCCAACTTCAGTTTGGCA 60.397 50.000 23.67 0.00 44.88 4.92
86 87 0.315251 GAGGCCAACTTCAGTTTGGC 59.685 55.000 16.22 16.22 44.20 4.52
87 88 0.593128 CGAGGCCAACTTCAGTTTGG 59.407 55.000 5.01 0.00 35.83 3.28
88 89 1.002468 CACGAGGCCAACTTCAGTTTG 60.002 52.381 5.01 0.00 35.83 2.93
89 90 1.308998 CACGAGGCCAACTTCAGTTT 58.691 50.000 5.01 0.00 35.83 2.66
90 91 0.535102 CCACGAGGCCAACTTCAGTT 60.535 55.000 5.01 0.00 39.12 3.16
91 92 1.071471 CCACGAGGCCAACTTCAGT 59.929 57.895 5.01 0.00 0.00 3.41
92 93 0.951040 GACCACGAGGCCAACTTCAG 60.951 60.000 5.01 0.00 39.06 3.02
93 94 1.070786 GACCACGAGGCCAACTTCA 59.929 57.895 5.01 0.00 39.06 3.02
94 95 2.027625 CGACCACGAGGCCAACTTC 61.028 63.158 5.01 0.00 42.66 3.01
95 96 2.030562 CGACCACGAGGCCAACTT 59.969 61.111 5.01 0.00 42.66 2.66
96 97 3.231736 ACGACCACGAGGCCAACT 61.232 61.111 5.01 0.00 42.66 3.16
97 98 3.041940 CACGACCACGAGGCCAAC 61.042 66.667 5.01 0.00 42.66 3.77
98 99 4.980805 GCACGACCACGAGGCCAA 62.981 66.667 5.01 0.00 42.66 4.52
100 101 4.681978 AAGCACGACCACGAGGCC 62.682 66.667 0.00 0.00 41.28 5.19
101 102 3.414700 CAAGCACGACCACGAGGC 61.415 66.667 0.00 0.00 42.66 4.70
102 103 3.414700 GCAAGCACGACCACGAGG 61.415 66.667 0.00 0.00 42.66 4.63
103 104 3.414700 GGCAAGCACGACCACGAG 61.415 66.667 0.00 0.00 42.66 4.18
104 105 4.228567 TGGCAAGCACGACCACGA 62.229 61.111 0.00 0.00 42.66 4.35
105 106 4.012895 GTGGCAAGCACGACCACG 62.013 66.667 0.00 0.00 44.02 4.94
112 113 1.945662 CAACAAGCGTGGCAAGCAC 60.946 57.895 26.47 0.00 37.01 4.40
113 114 2.412525 CAACAAGCGTGGCAAGCA 59.587 55.556 26.47 0.00 37.01 3.91
114 115 3.032033 GCAACAAGCGTGGCAAGC 61.032 61.111 17.91 17.91 42.19 4.01
123 124 3.198236 TTCAGCCGCAGCAACAAGC 62.198 57.895 0.00 0.00 43.56 4.01
124 125 1.081641 CTTCAGCCGCAGCAACAAG 60.082 57.895 0.00 0.00 43.56 3.16
125 126 1.100463 TTCTTCAGCCGCAGCAACAA 61.100 50.000 0.00 0.00 43.56 2.83
126 127 1.509644 CTTCTTCAGCCGCAGCAACA 61.510 55.000 0.00 0.00 43.56 3.33
127 128 1.208614 CTTCTTCAGCCGCAGCAAC 59.791 57.895 0.00 0.00 43.56 4.17
128 129 2.620112 GCTTCTTCAGCCGCAGCAA 61.620 57.895 0.00 0.00 43.65 3.91
129 130 3.052082 GCTTCTTCAGCCGCAGCA 61.052 61.111 0.00 0.00 43.65 4.41
137 138 1.457346 GTCACCATGGGCTTCTTCAG 58.543 55.000 18.09 0.00 0.00 3.02
138 139 0.321564 CGTCACCATGGGCTTCTTCA 60.322 55.000 18.09 0.00 0.00 3.02
139 140 1.026718 CCGTCACCATGGGCTTCTTC 61.027 60.000 18.09 0.00 0.00 2.87
140 141 1.002134 CCGTCACCATGGGCTTCTT 60.002 57.895 18.09 0.00 0.00 2.52
141 142 2.671070 CCGTCACCATGGGCTTCT 59.329 61.111 18.09 0.00 0.00 2.85
142 143 3.134127 GCCGTCACCATGGGCTTC 61.134 66.667 18.09 2.62 43.52 3.86
152 153 4.849329 CTAGCCCGTCGCCGTCAC 62.849 72.222 0.00 0.00 38.78 3.67
160 161 4.814294 CACGCACCCTAGCCCGTC 62.814 72.222 0.00 0.00 0.00 4.79
180 181 3.357079 CTTGCTCCCACGCCACAC 61.357 66.667 0.00 0.00 0.00 3.82
181 182 3.414136 AACTTGCTCCCACGCCACA 62.414 57.895 0.00 0.00 0.00 4.17
182 183 2.594592 AACTTGCTCCCACGCCAC 60.595 61.111 0.00 0.00 0.00 5.01
183 184 1.476845 TAGAACTTGCTCCCACGCCA 61.477 55.000 0.00 0.00 0.00 5.69
184 185 0.741221 CTAGAACTTGCTCCCACGCC 60.741 60.000 0.00 0.00 0.00 5.68
185 186 0.246635 TCTAGAACTTGCTCCCACGC 59.753 55.000 0.00 0.00 0.00 5.34
186 187 2.093973 ACATCTAGAACTTGCTCCCACG 60.094 50.000 0.00 0.00 0.00 4.94
187 188 3.265791 CACATCTAGAACTTGCTCCCAC 58.734 50.000 0.00 0.00 0.00 4.61
188 189 2.237143 CCACATCTAGAACTTGCTCCCA 59.763 50.000 0.00 0.00 0.00 4.37
189 190 2.501723 TCCACATCTAGAACTTGCTCCC 59.498 50.000 0.00 0.00 0.00 4.30
190 191 3.895232 TCCACATCTAGAACTTGCTCC 57.105 47.619 0.00 0.00 0.00 4.70
191 192 4.574013 CCAATCCACATCTAGAACTTGCTC 59.426 45.833 0.00 0.00 0.00 4.26
192 193 4.018960 ACCAATCCACATCTAGAACTTGCT 60.019 41.667 0.00 0.00 0.00 3.91
193 194 4.265073 ACCAATCCACATCTAGAACTTGC 58.735 43.478 0.00 0.00 0.00 4.01
194 195 6.402550 CGAAACCAATCCACATCTAGAACTTG 60.403 42.308 0.00 0.00 0.00 3.16
195 196 5.643777 CGAAACCAATCCACATCTAGAACTT 59.356 40.000 0.00 0.00 0.00 2.66
196 197 5.178797 CGAAACCAATCCACATCTAGAACT 58.821 41.667 0.00 0.00 0.00 3.01
197 198 4.935808 ACGAAACCAATCCACATCTAGAAC 59.064 41.667 0.00 0.00 0.00 3.01
198 199 4.935205 CACGAAACCAATCCACATCTAGAA 59.065 41.667 0.00 0.00 0.00 2.10
199 200 4.221924 TCACGAAACCAATCCACATCTAGA 59.778 41.667 0.00 0.00 0.00 2.43
200 201 4.503910 TCACGAAACCAATCCACATCTAG 58.496 43.478 0.00 0.00 0.00 2.43
201 202 4.221924 TCTCACGAAACCAATCCACATCTA 59.778 41.667 0.00 0.00 0.00 1.98
202 203 3.007940 TCTCACGAAACCAATCCACATCT 59.992 43.478 0.00 0.00 0.00 2.90
203 204 3.334691 TCTCACGAAACCAATCCACATC 58.665 45.455 0.00 0.00 0.00 3.06
204 205 3.417069 TCTCACGAAACCAATCCACAT 57.583 42.857 0.00 0.00 0.00 3.21
205 206 2.920724 TCTCACGAAACCAATCCACA 57.079 45.000 0.00 0.00 0.00 4.17
206 207 3.058914 CACTTCTCACGAAACCAATCCAC 60.059 47.826 0.00 0.00 0.00 4.02
207 208 3.138304 CACTTCTCACGAAACCAATCCA 58.862 45.455 0.00 0.00 0.00 3.41
208 209 2.484264 CCACTTCTCACGAAACCAATCC 59.516 50.000 0.00 0.00 0.00 3.01
209 210 2.484264 CCCACTTCTCACGAAACCAATC 59.516 50.000 0.00 0.00 0.00 2.67
210 211 2.158667 ACCCACTTCTCACGAAACCAAT 60.159 45.455 0.00 0.00 0.00 3.16
211 212 1.210967 ACCCACTTCTCACGAAACCAA 59.789 47.619 0.00 0.00 0.00 3.67
212 213 0.834612 ACCCACTTCTCACGAAACCA 59.165 50.000 0.00 0.00 0.00 3.67
213 214 2.685100 CTACCCACTTCTCACGAAACC 58.315 52.381 0.00 0.00 0.00 3.27
498 499 3.381590 ACACATCAGCATCTAGAAGCGTA 59.618 43.478 13.87 6.98 35.48 4.42
501 502 2.871022 CCACACATCAGCATCTAGAAGC 59.129 50.000 12.00 12.00 0.00 3.86
509 510 0.625316 TAAGGCCCACACATCAGCAT 59.375 50.000 0.00 0.00 0.00 3.79
510 511 0.035152 CTAAGGCCCACACATCAGCA 60.035 55.000 0.00 0.00 0.00 4.41
512 513 0.620556 ACCTAAGGCCCACACATCAG 59.379 55.000 0.00 0.00 0.00 2.90
516 517 0.844661 ATCCACCTAAGGCCCACACA 60.845 55.000 0.00 0.00 0.00 3.72
526 527 1.140312 GGCCTCATCCATCCACCTAA 58.860 55.000 0.00 0.00 0.00 2.69
527 528 1.121407 CGGCCTCATCCATCCACCTA 61.121 60.000 0.00 0.00 0.00 3.08
530 531 1.227674 GTCGGCCTCATCCATCCAC 60.228 63.158 0.00 0.00 0.00 4.02
592 593 4.678269 ACACGAGACGGACACGCG 62.678 66.667 3.53 3.53 46.04 6.01
593 594 2.799916 GACACGAGACGGACACGC 60.800 66.667 0.00 0.00 46.04 5.34
599 600 1.134075 CTACACGGACACGAGACGG 59.866 63.158 0.00 0.00 44.60 4.79
600 601 0.179230 GTCTACACGGACACGAGACG 60.179 60.000 0.00 0.00 44.60 4.18
612 613 1.463528 GCGTCCAATTTGCGTCTACAC 60.464 52.381 0.00 0.00 0.00 2.90
616 617 0.665835 TTTGCGTCCAATTTGCGTCT 59.334 45.000 0.00 0.00 0.00 4.18
632 633 1.581602 CGTATTTCCGGCGCAAATTTG 59.418 47.619 14.67 14.03 0.00 2.32
633 634 1.200484 ACGTATTTCCGGCGCAAATTT 59.800 42.857 14.67 0.00 0.00 1.82
634 635 0.806241 ACGTATTTCCGGCGCAAATT 59.194 45.000 14.67 3.81 0.00 1.82
635 636 0.375803 GACGTATTTCCGGCGCAAAT 59.624 50.000 13.89 13.89 0.00 2.32
636 637 1.637478 GGACGTATTTCCGGCGCAAA 61.637 55.000 10.83 0.00 36.47 3.68
637 638 2.101835 GGACGTATTTCCGGCGCAA 61.102 57.895 10.83 0.00 36.47 4.85
638 639 2.509786 GGACGTATTTCCGGCGCA 60.510 61.111 10.83 0.00 36.47 6.09
639 640 1.637478 TTTGGACGTATTTCCGGCGC 61.637 55.000 0.00 0.00 38.69 6.53
640 641 0.095762 GTTTGGACGTATTTCCGGCG 59.904 55.000 0.00 0.00 38.69 6.46
644 645 4.202030 TGGTGTTTGTTTGGACGTATTTCC 60.202 41.667 0.00 0.00 36.03 3.13
650 651 1.135228 GCTTGGTGTTTGTTTGGACGT 60.135 47.619 0.00 0.00 0.00 4.34
652 653 2.165437 TCAGCTTGGTGTTTGTTTGGAC 59.835 45.455 0.00 0.00 0.00 4.02
654 655 2.539476 GTCAGCTTGGTGTTTGTTTGG 58.461 47.619 0.00 0.00 0.00 3.28
661 662 3.795877 CAAATTTGGTCAGCTTGGTGTT 58.204 40.909 10.49 0.00 0.00 3.32
669 670 1.391144 GCATTCGCAAATTTGGTCAGC 59.609 47.619 19.47 3.94 38.36 4.26
671 672 1.000827 ACGCATTCGCAAATTTGGTCA 60.001 42.857 19.47 2.95 39.84 4.02
684 685 0.923911 GCAAATACGCCGACGCATTC 60.924 55.000 0.00 0.00 45.53 2.67
685 686 1.061887 GCAAATACGCCGACGCATT 59.938 52.632 0.00 0.00 45.53 3.56
690 691 2.359598 CAAATACGCAAATACGCCGAC 58.640 47.619 0.00 0.00 36.19 4.79
692 693 1.595976 CCCAAATACGCAAATACGCCG 60.596 52.381 0.00 0.00 36.19 6.46
693 694 1.862411 GCCCAAATACGCAAATACGCC 60.862 52.381 0.00 0.00 36.19 5.68
694 695 1.472990 GCCCAAATACGCAAATACGC 58.527 50.000 0.00 0.00 36.19 4.42
695 696 1.595976 CGGCCCAAATACGCAAATACG 60.596 52.381 0.00 0.00 39.50 3.06
696 697 1.402613 ACGGCCCAAATACGCAAATAC 59.597 47.619 0.00 0.00 0.00 1.89
697 698 1.752683 ACGGCCCAAATACGCAAATA 58.247 45.000 0.00 0.00 0.00 1.40
698 699 0.892063 AACGGCCCAAATACGCAAAT 59.108 45.000 0.00 0.00 0.00 2.32
699 700 0.241481 GAACGGCCCAAATACGCAAA 59.759 50.000 0.00 0.00 0.00 3.68
700 701 0.889638 TGAACGGCCCAAATACGCAA 60.890 50.000 0.00 0.00 0.00 4.85
701 702 0.678366 ATGAACGGCCCAAATACGCA 60.678 50.000 0.00 0.00 0.00 5.24
702 703 0.454196 AATGAACGGCCCAAATACGC 59.546 50.000 0.00 0.00 0.00 4.42
703 704 2.014128 AGAATGAACGGCCCAAATACG 58.986 47.619 0.00 0.00 0.00 3.06
704 705 2.752903 ACAGAATGAACGGCCCAAATAC 59.247 45.455 0.00 0.00 39.69 1.89
705 706 3.013921 GACAGAATGAACGGCCCAAATA 58.986 45.455 0.00 0.00 39.69 1.40
706 707 1.818674 GACAGAATGAACGGCCCAAAT 59.181 47.619 0.00 0.00 39.69 2.32
707 708 1.202879 AGACAGAATGAACGGCCCAAA 60.203 47.619 0.00 0.00 39.69 3.28
718 719 3.393800 ACTGGTCGAAACAGACAGAATG 58.606 45.455 21.23 0.00 42.62 2.67
719 720 3.753294 ACTGGTCGAAACAGACAGAAT 57.247 42.857 21.23 0.00 42.62 2.40
734 735 2.551270 ACACATCTGGTCCATACTGGT 58.449 47.619 0.00 0.00 39.03 4.00
735 736 3.273434 CAACACATCTGGTCCATACTGG 58.727 50.000 0.00 0.00 39.43 4.00
737 738 2.356125 GCCAACACATCTGGTCCATACT 60.356 50.000 0.00 0.00 36.24 2.12
738 739 2.017049 GCCAACACATCTGGTCCATAC 58.983 52.381 0.00 0.00 36.24 2.39
739 740 1.632920 TGCCAACACATCTGGTCCATA 59.367 47.619 0.00 0.00 36.24 2.74
741 742 0.537143 GTGCCAACACATCTGGTCCA 60.537 55.000 0.00 0.00 46.61 4.02
755 766 2.904866 GCCAACTCCAACGTGCCA 60.905 61.111 0.00 0.00 0.00 4.92
756 767 3.670377 GGCCAACTCCAACGTGCC 61.670 66.667 0.00 0.00 0.00 5.01
757 768 2.741486 TAGGGCCAACTCCAACGTGC 62.741 60.000 6.18 0.00 0.00 5.34
758 769 0.250553 TTAGGGCCAACTCCAACGTG 60.251 55.000 6.18 0.00 0.00 4.49
759 770 0.036306 CTTAGGGCCAACTCCAACGT 59.964 55.000 6.18 0.00 0.00 3.99
760 771 0.036306 ACTTAGGGCCAACTCCAACG 59.964 55.000 6.18 0.00 0.00 4.10
761 772 1.202891 ACACTTAGGGCCAACTCCAAC 60.203 52.381 6.18 0.00 0.00 3.77
762 773 1.145571 ACACTTAGGGCCAACTCCAA 58.854 50.000 6.18 0.00 0.00 3.53
763 774 2.032965 TACACTTAGGGCCAACTCCA 57.967 50.000 6.18 0.00 0.00 3.86
803 814 6.201234 GCTTAGTTTCCGGCATTTGTTTAAAA 59.799 34.615 0.00 0.00 0.00 1.52
814 843 0.887387 GTGGTGCTTAGTTTCCGGCA 60.887 55.000 0.00 0.00 0.00 5.69
819 848 2.488153 GTGATGGGTGGTGCTTAGTTTC 59.512 50.000 0.00 0.00 0.00 2.78
824 853 1.915489 AGATGTGATGGGTGGTGCTTA 59.085 47.619 0.00 0.00 0.00 3.09
825 854 0.700564 AGATGTGATGGGTGGTGCTT 59.299 50.000 0.00 0.00 0.00 3.91
826 855 0.254178 GAGATGTGATGGGTGGTGCT 59.746 55.000 0.00 0.00 0.00 4.40
917 970 0.530650 ACTCACGCTGACACTTGTGG 60.531 55.000 5.72 0.00 33.25 4.17
919 972 1.154205 GCACTCACGCTGACACTTGT 61.154 55.000 0.00 0.00 0.00 3.16
938 993 3.119291 GAGAAGGAGTATGTGCATGTCG 58.881 50.000 0.00 0.00 0.00 4.35
944 999 1.208052 TGGCAGAGAAGGAGTATGTGC 59.792 52.381 0.00 0.00 32.81 4.57
1035 1090 0.251916 CGGTGGATGGAGCCTGTTTA 59.748 55.000 0.00 0.00 0.00 2.01
1041 1096 1.821061 ATCGATCGGTGGATGGAGCC 61.821 60.000 16.41 0.00 40.16 4.70
1101 1156 3.625897 CGTGGGAGGTGTGGAGCA 61.626 66.667 0.00 0.00 0.00 4.26
1733 1836 1.933853 GCACGCGACTGGAAGAATAAT 59.066 47.619 15.93 0.00 37.43 1.28
1734 1837 1.355971 GCACGCGACTGGAAGAATAA 58.644 50.000 15.93 0.00 37.43 1.40
1735 1838 0.459585 GGCACGCGACTGGAAGAATA 60.460 55.000 15.93 0.00 37.43 1.75
1798 1931 0.249868 CAAACCACTGCTCCTCGTCA 60.250 55.000 0.00 0.00 0.00 4.35
1967 2107 9.621629 TGTTTCTTCCTAAATCTACAACTTGAA 57.378 29.630 0.00 0.00 0.00 2.69
1983 2141 5.763876 AACTGCCTAGTATGTTTCTTCCT 57.236 39.130 0.00 0.00 35.69 3.36
1991 2150 4.910458 AGGAACAAACTGCCTAGTATGT 57.090 40.909 0.00 0.00 35.69 2.29
1994 2153 4.967084 TGAAGGAACAAACTGCCTAGTA 57.033 40.909 0.00 0.00 35.69 1.82
1996 2155 5.010012 ACAAATGAAGGAACAAACTGCCTAG 59.990 40.000 0.00 0.00 0.00 3.02
2011 2170 9.436957 ACTCCACAAATACTACTACAAATGAAG 57.563 33.333 0.00 0.00 0.00 3.02
2013 2172 9.431887 GAACTCCACAAATACTACTACAAATGA 57.568 33.333 0.00 0.00 0.00 2.57
2014 2173 8.665685 GGAACTCCACAAATACTACTACAAATG 58.334 37.037 0.00 0.00 35.64 2.32
2015 2174 7.827729 GGGAACTCCACAAATACTACTACAAAT 59.172 37.037 0.00 0.00 37.91 2.32
2017 2176 6.572898 CGGGAACTCCACAAATACTACTACAA 60.573 42.308 0.00 0.00 37.91 2.41
2022 2182 3.055602 ACCGGGAACTCCACAAATACTAC 60.056 47.826 6.32 0.00 37.91 2.73
2033 2193 3.413846 AAAGTAGAAACCGGGAACTCC 57.586 47.619 6.32 0.00 0.00 3.85
2060 2220 5.470437 GGTGTATTAAGCAATCTAGCCCTTC 59.530 44.000 0.00 0.00 34.23 3.46
2084 2253 6.456181 GCTCTCGAGTTCAGAACCAATAATTG 60.456 42.308 13.13 0.00 0.00 2.32
2095 2264 2.030579 CGATAACGCTCTCGAGTTCAGA 59.969 50.000 13.13 0.00 37.05 3.27
2107 2276 0.175760 ATGGAGTGCACGATAACGCT 59.824 50.000 12.01 0.00 43.96 5.07
2188 2362 6.096705 TCAATCATTTTCACAGGTTGTCAACT 59.903 34.615 15.17 0.00 0.00 3.16
2211 2385 0.825425 TTGCAAGGCCGTCCAAATCA 60.825 50.000 0.00 0.00 33.74 2.57
2224 2398 5.058490 AGTGGATGGATTTTTGTTTGCAAG 58.942 37.500 0.00 0.00 35.82 4.01
2262 2436 6.867662 AGCAGCGCTGATTACTTATAAAAT 57.132 33.333 40.21 1.37 37.57 1.82
2264 2438 8.085909 TGTATAGCAGCGCTGATTACTTATAAA 58.914 33.333 40.21 19.96 40.10 1.40
2265 2439 7.541091 GTGTATAGCAGCGCTGATTACTTATAA 59.459 37.037 40.21 17.46 40.10 0.98
2266 2440 7.027760 GTGTATAGCAGCGCTGATTACTTATA 58.972 38.462 40.21 24.11 40.10 0.98
2267 2441 5.864474 GTGTATAGCAGCGCTGATTACTTAT 59.136 40.000 40.21 25.19 40.10 1.73
2268 2442 5.220381 GTGTATAGCAGCGCTGATTACTTA 58.780 41.667 40.21 19.90 40.10 2.24
2269 2443 4.051922 GTGTATAGCAGCGCTGATTACTT 58.948 43.478 40.21 20.98 40.10 2.24
2270 2444 3.068165 TGTGTATAGCAGCGCTGATTACT 59.932 43.478 40.21 27.69 40.10 2.24
2271 2445 3.182572 GTGTGTATAGCAGCGCTGATTAC 59.817 47.826 40.21 31.71 40.10 1.89
2272 2446 3.381045 GTGTGTATAGCAGCGCTGATTA 58.619 45.455 40.21 28.73 40.10 1.75
2273 2447 2.205074 GTGTGTATAGCAGCGCTGATT 58.795 47.619 40.21 27.59 40.10 2.57
2274 2448 1.858091 GTGTGTATAGCAGCGCTGAT 58.142 50.000 40.21 36.38 40.10 2.90
2275 2449 0.525455 CGTGTGTATAGCAGCGCTGA 60.525 55.000 40.21 21.71 40.10 4.26
2276 2450 0.525455 TCGTGTGTATAGCAGCGCTG 60.525 55.000 32.83 32.83 40.10 5.18
2277 2451 0.385751 ATCGTGTGTATAGCAGCGCT 59.614 50.000 2.64 2.64 43.41 5.92
2278 2452 0.504384 CATCGTGTGTATAGCAGCGC 59.496 55.000 0.00 0.00 0.00 5.92
2279 2453 1.131771 CCATCGTGTGTATAGCAGCG 58.868 55.000 0.00 0.00 0.00 5.18
2280 2454 1.860950 CACCATCGTGTGTATAGCAGC 59.139 52.381 0.00 0.00 35.10 5.25
2291 2465 0.389817 ATCGTCCACACACCATCGTG 60.390 55.000 0.00 0.00 46.11 4.35
2292 2466 0.320374 AATCGTCCACACACCATCGT 59.680 50.000 0.00 0.00 0.00 3.73
2293 2467 0.999406 GAATCGTCCACACACCATCG 59.001 55.000 0.00 0.00 0.00 3.84
2294 2468 1.369625 GGAATCGTCCACACACCATC 58.630 55.000 0.00 0.00 44.26 3.51
2295 2469 3.551259 GGAATCGTCCACACACCAT 57.449 52.632 0.00 0.00 44.26 3.55
2304 2478 1.725164 GTTGTCGTTCAGGAATCGTCC 59.275 52.381 0.00 0.00 45.35 4.79
2305 2479 1.385743 CGTTGTCGTTCAGGAATCGTC 59.614 52.381 0.00 0.00 0.00 4.20
2306 2480 1.415374 CGTTGTCGTTCAGGAATCGT 58.585 50.000 0.00 0.00 0.00 3.73
2307 2481 0.093026 GCGTTGTCGTTCAGGAATCG 59.907 55.000 0.00 0.00 39.49 3.34
2308 2482 1.126846 CTGCGTTGTCGTTCAGGAATC 59.873 52.381 0.00 0.00 39.49 2.52
2309 2483 1.148310 CTGCGTTGTCGTTCAGGAAT 58.852 50.000 0.00 0.00 39.49 3.01
2310 2484 0.103390 TCTGCGTTGTCGTTCAGGAA 59.897 50.000 0.00 0.00 39.49 3.36
2311 2485 0.317160 ATCTGCGTTGTCGTTCAGGA 59.683 50.000 0.00 0.00 39.49 3.86
2312 2486 0.716108 GATCTGCGTTGTCGTTCAGG 59.284 55.000 0.00 0.00 39.49 3.86
2313 2487 1.418373 TGATCTGCGTTGTCGTTCAG 58.582 50.000 0.00 0.00 39.49 3.02
2314 2488 1.525197 GTTGATCTGCGTTGTCGTTCA 59.475 47.619 0.00 0.00 39.49 3.18
2315 2489 1.792949 AGTTGATCTGCGTTGTCGTTC 59.207 47.619 0.00 0.00 39.49 3.95
2316 2490 1.792949 GAGTTGATCTGCGTTGTCGTT 59.207 47.619 0.00 0.00 39.49 3.85
2317 2491 1.269569 TGAGTTGATCTGCGTTGTCGT 60.270 47.619 0.00 0.00 39.49 4.34
2318 2492 1.418373 TGAGTTGATCTGCGTTGTCG 58.582 50.000 0.00 0.00 40.37 4.35
2319 2493 2.349886 GGATGAGTTGATCTGCGTTGTC 59.650 50.000 0.00 0.00 0.00 3.18
2320 2494 2.289631 TGGATGAGTTGATCTGCGTTGT 60.290 45.455 0.00 0.00 0.00 3.32
2321 2495 2.349590 TGGATGAGTTGATCTGCGTTG 58.650 47.619 0.00 0.00 0.00 4.10
2322 2496 2.768253 TGGATGAGTTGATCTGCGTT 57.232 45.000 0.00 0.00 0.00 4.84
2323 2497 2.558378 CATGGATGAGTTGATCTGCGT 58.442 47.619 0.00 0.00 0.00 5.24
2324 2498 1.263484 GCATGGATGAGTTGATCTGCG 59.737 52.381 0.00 0.00 0.00 5.18
2325 2499 2.033049 GTGCATGGATGAGTTGATCTGC 59.967 50.000 0.00 0.00 0.00 4.26
2326 2500 3.275999 TGTGCATGGATGAGTTGATCTG 58.724 45.455 0.00 0.00 0.00 2.90
2327 2501 3.639672 TGTGCATGGATGAGTTGATCT 57.360 42.857 0.00 0.00 0.00 2.75
2328 2502 3.441222 TGTTGTGCATGGATGAGTTGATC 59.559 43.478 0.00 0.00 0.00 2.92
2329 2503 3.423749 TGTTGTGCATGGATGAGTTGAT 58.576 40.909 0.00 0.00 0.00 2.57
2330 2504 2.815503 CTGTTGTGCATGGATGAGTTGA 59.184 45.455 0.00 0.00 0.00 3.18
2331 2505 2.555325 ACTGTTGTGCATGGATGAGTTG 59.445 45.455 0.00 0.00 0.00 3.16
2332 2506 2.867624 ACTGTTGTGCATGGATGAGTT 58.132 42.857 0.00 0.00 0.00 3.01
2333 2507 2.574006 ACTGTTGTGCATGGATGAGT 57.426 45.000 0.00 0.00 0.00 3.41
2334 2508 4.456911 ACTTTACTGTTGTGCATGGATGAG 59.543 41.667 0.00 0.00 0.00 2.90
2335 2509 4.216042 CACTTTACTGTTGTGCATGGATGA 59.784 41.667 0.00 0.00 0.00 2.92
2336 2510 4.216042 TCACTTTACTGTTGTGCATGGATG 59.784 41.667 0.00 0.00 0.00 3.51
2337 2511 4.397420 TCACTTTACTGTTGTGCATGGAT 58.603 39.130 0.00 0.00 0.00 3.41
2338 2512 3.814625 TCACTTTACTGTTGTGCATGGA 58.185 40.909 0.00 0.00 0.00 3.41
2339 2513 4.539870 CTTCACTTTACTGTTGTGCATGG 58.460 43.478 0.00 0.00 0.00 3.66
2340 2514 3.976942 GCTTCACTTTACTGTTGTGCATG 59.023 43.478 0.00 0.00 0.00 4.06
2341 2515 3.631686 TGCTTCACTTTACTGTTGTGCAT 59.368 39.130 0.00 0.00 0.00 3.96
2342 2516 3.013219 TGCTTCACTTTACTGTTGTGCA 58.987 40.909 0.00 0.00 0.00 4.57
2343 2517 3.312421 TCTGCTTCACTTTACTGTTGTGC 59.688 43.478 0.00 0.00 0.00 4.57
2344 2518 4.550831 CGTCTGCTTCACTTTACTGTTGTG 60.551 45.833 0.00 0.00 0.00 3.33
2345 2519 3.555956 CGTCTGCTTCACTTTACTGTTGT 59.444 43.478 0.00 0.00 0.00 3.32
2346 2520 3.059597 CCGTCTGCTTCACTTTACTGTTG 60.060 47.826 0.00 0.00 0.00 3.33
2347 2521 3.131396 CCGTCTGCTTCACTTTACTGTT 58.869 45.455 0.00 0.00 0.00 3.16
2348 2522 2.755650 CCGTCTGCTTCACTTTACTGT 58.244 47.619 0.00 0.00 0.00 3.55
2349 2523 1.461127 GCCGTCTGCTTCACTTTACTG 59.539 52.381 0.00 0.00 36.87 2.74
2350 2524 1.797025 GCCGTCTGCTTCACTTTACT 58.203 50.000 0.00 0.00 36.87 2.24
2361 2535 3.056313 GCCAAATCCAGCCGTCTGC 62.056 63.158 0.00 0.00 39.00 4.26
2362 2536 2.409870 GGCCAAATCCAGCCGTCTG 61.410 63.158 0.00 0.00 39.87 3.51
2363 2537 2.044946 GGCCAAATCCAGCCGTCT 60.045 61.111 0.00 0.00 39.87 4.18
2367 2541 3.508840 CGACGGCCAAATCCAGCC 61.509 66.667 2.24 0.00 46.17 4.85
2368 2542 2.746277 ACGACGGCCAAATCCAGC 60.746 61.111 2.24 0.00 0.00 4.85
2369 2543 1.079127 AGACGACGGCCAAATCCAG 60.079 57.895 2.24 0.00 0.00 3.86
2370 2544 1.079405 GAGACGACGGCCAAATCCA 60.079 57.895 2.24 0.00 0.00 3.41
2371 2545 1.814169 GGAGACGACGGCCAAATCC 60.814 63.158 2.24 0.00 0.00 3.01
2372 2546 0.391263 AAGGAGACGACGGCCAAATC 60.391 55.000 2.24 0.00 0.00 2.17
2373 2547 0.673644 CAAGGAGACGACGGCCAAAT 60.674 55.000 2.24 0.00 0.00 2.32
2374 2548 1.301401 CAAGGAGACGACGGCCAAA 60.301 57.895 2.24 0.00 0.00 3.28
2375 2549 2.342279 CAAGGAGACGACGGCCAA 59.658 61.111 2.24 0.00 0.00 4.52
2376 2550 2.915659 ACAAGGAGACGACGGCCA 60.916 61.111 2.24 0.00 0.00 5.36
2377 2551 2.126031 GACAAGGAGACGACGGCC 60.126 66.667 0.00 0.00 0.00 6.13
2378 2552 2.504244 CGACAAGGAGACGACGGC 60.504 66.667 0.00 0.00 37.60 5.68
2379 2553 1.442184 CACGACAAGGAGACGACGG 60.442 63.158 0.00 0.00 38.73 4.79
2380 2554 2.081212 GCACGACAAGGAGACGACG 61.081 63.158 0.00 0.00 38.73 5.12
2381 2555 1.007734 TGCACGACAAGGAGACGAC 60.008 57.895 0.00 0.00 38.73 4.34
2382 2556 1.007734 GTGCACGACAAGGAGACGA 60.008 57.895 0.00 0.00 38.73 4.20
2383 2557 2.365068 CGTGCACGACAAGGAGACG 61.365 63.158 34.93 1.26 43.02 4.18
2384 2558 2.658707 GCGTGCACGACAAGGAGAC 61.659 63.158 41.19 17.19 43.02 3.36
2385 2559 2.355837 GCGTGCACGACAAGGAGA 60.356 61.111 41.19 0.00 43.02 3.71
2386 2560 2.661537 TGCGTGCACGACAAGGAG 60.662 61.111 41.19 11.65 43.02 3.69
2387 2561 2.077821 TACTGCGTGCACGACAAGGA 62.078 55.000 41.19 27.15 43.02 3.36
2388 2562 1.014044 ATACTGCGTGCACGACAAGG 61.014 55.000 41.19 25.94 43.02 3.61
2389 2563 0.366871 GATACTGCGTGCACGACAAG 59.633 55.000 41.19 32.17 43.02 3.16
2390 2564 1.341369 CGATACTGCGTGCACGACAA 61.341 55.000 41.19 23.94 43.02 3.18
2391 2565 1.799916 CGATACTGCGTGCACGACA 60.800 57.895 41.19 32.66 43.02 4.35
2392 2566 1.730593 GACGATACTGCGTGCACGAC 61.731 60.000 41.19 30.17 45.72 4.34
2393 2567 1.513373 GACGATACTGCGTGCACGA 60.513 57.895 41.19 24.37 45.72 4.35
2394 2568 1.071019 AAGACGATACTGCGTGCACG 61.071 55.000 34.01 34.01 45.72 5.34
2395 2569 1.068474 AAAGACGATACTGCGTGCAC 58.932 50.000 6.82 6.82 45.72 4.57
2396 2570 2.256174 GTAAAGACGATACTGCGTGCA 58.744 47.619 0.00 0.00 45.72 4.57
2397 2571 2.256174 TGTAAAGACGATACTGCGTGC 58.744 47.619 0.00 0.00 45.72 5.34
2398 2572 2.279136 GCTGTAAAGACGATACTGCGTG 59.721 50.000 0.00 0.00 45.72 5.34
2399 2573 2.094906 TGCTGTAAAGACGATACTGCGT 60.095 45.455 13.61 0.00 45.61 5.24
2400 2574 2.526077 TGCTGTAAAGACGATACTGCG 58.474 47.619 13.61 0.00 45.61 5.18
2401 2575 3.512680 ACTGCTGTAAAGACGATACTGC 58.487 45.455 12.42 12.42 44.02 4.40
2402 2576 5.220043 CGAAACTGCTGTAAAGACGATACTG 60.220 44.000 0.00 0.00 0.00 2.74
2403 2577 4.857588 CGAAACTGCTGTAAAGACGATACT 59.142 41.667 0.00 0.00 0.00 2.12
2404 2578 4.855388 TCGAAACTGCTGTAAAGACGATAC 59.145 41.667 0.00 0.00 0.00 2.24
2405 2579 5.050644 TCGAAACTGCTGTAAAGACGATA 57.949 39.130 0.00 0.00 0.00 2.92
2406 2580 3.909430 TCGAAACTGCTGTAAAGACGAT 58.091 40.909 0.00 0.00 0.00 3.73
2407 2581 3.358707 TCGAAACTGCTGTAAAGACGA 57.641 42.857 0.00 2.20 0.00 4.20
2408 2582 5.345202 ACTTATCGAAACTGCTGTAAAGACG 59.655 40.000 0.00 0.00 0.00 4.18
2409 2583 6.707599 ACTTATCGAAACTGCTGTAAAGAC 57.292 37.500 0.00 0.00 0.00 3.01
2410 2584 8.997621 ATTACTTATCGAAACTGCTGTAAAGA 57.002 30.769 0.00 0.00 0.00 2.52
2414 2588 9.472361 GGATAATTACTTATCGAAACTGCTGTA 57.528 33.333 0.00 0.00 42.80 2.74
2415 2589 8.204836 AGGATAATTACTTATCGAAACTGCTGT 58.795 33.333 6.72 0.00 42.80 4.40
2416 2590 8.594881 AGGATAATTACTTATCGAAACTGCTG 57.405 34.615 6.72 0.00 42.80 4.41
2417 2591 9.694137 GTAGGATAATTACTTATCGAAACTGCT 57.306 33.333 6.72 0.87 42.80 4.24
2418 2592 8.636843 CGTAGGATAATTACTTATCGAAACTGC 58.363 37.037 6.72 2.51 42.80 4.40
2419 2593 8.636843 GCGTAGGATAATTACTTATCGAAACTG 58.363 37.037 6.72 4.10 42.80 3.16
2420 2594 8.355169 TGCGTAGGATAATTACTTATCGAAACT 58.645 33.333 6.72 2.24 42.80 2.66
2421 2595 8.423215 GTGCGTAGGATAATTACTTATCGAAAC 58.577 37.037 6.72 4.63 42.80 2.78
2422 2596 8.355169 AGTGCGTAGGATAATTACTTATCGAAA 58.645 33.333 6.72 0.00 42.80 3.46
2423 2597 7.879070 AGTGCGTAGGATAATTACTTATCGAA 58.121 34.615 6.72 0.00 42.80 3.71
2424 2598 7.444629 AGTGCGTAGGATAATTACTTATCGA 57.555 36.000 6.72 0.00 42.80 3.59
2425 2599 9.275231 CTTAGTGCGTAGGATAATTACTTATCG 57.725 37.037 6.72 0.00 42.80 2.92
2426 2600 9.570488 CCTTAGTGCGTAGGATAATTACTTATC 57.430 37.037 4.62 4.62 41.66 1.75
2427 2601 8.033626 GCCTTAGTGCGTAGGATAATTACTTAT 58.966 37.037 0.00 0.00 33.13 1.73
2428 2602 7.373493 GCCTTAGTGCGTAGGATAATTACTTA 58.627 38.462 0.00 0.00 33.13 2.24
2429 2603 6.221659 GCCTTAGTGCGTAGGATAATTACTT 58.778 40.000 0.00 0.00 33.13 2.24
2430 2604 5.279356 GGCCTTAGTGCGTAGGATAATTACT 60.279 44.000 0.00 0.00 33.13 2.24
2431 2605 4.928020 GGCCTTAGTGCGTAGGATAATTAC 59.072 45.833 0.00 0.00 33.13 1.89
2432 2606 4.589798 TGGCCTTAGTGCGTAGGATAATTA 59.410 41.667 3.32 0.00 33.13 1.40
2433 2607 3.389983 TGGCCTTAGTGCGTAGGATAATT 59.610 43.478 3.32 0.00 33.13 1.40
2434 2608 2.969950 TGGCCTTAGTGCGTAGGATAAT 59.030 45.455 3.32 0.00 33.13 1.28
2435 2609 2.390696 TGGCCTTAGTGCGTAGGATAA 58.609 47.619 3.32 0.00 33.13 1.75
2436 2610 2.076207 TGGCCTTAGTGCGTAGGATA 57.924 50.000 3.32 0.00 33.13 2.59
2437 2611 1.134491 GTTGGCCTTAGTGCGTAGGAT 60.134 52.381 3.32 0.00 33.13 3.24
2438 2612 0.248289 GTTGGCCTTAGTGCGTAGGA 59.752 55.000 3.32 0.00 33.13 2.94
2439 2613 0.249398 AGTTGGCCTTAGTGCGTAGG 59.751 55.000 3.32 0.00 34.54 3.18
2440 2614 1.641577 GAGTTGGCCTTAGTGCGTAG 58.358 55.000 3.32 0.00 0.00 3.51
2441 2615 0.248289 GGAGTTGGCCTTAGTGCGTA 59.752 55.000 3.32 0.00 0.00 4.42
2442 2616 1.003718 GGAGTTGGCCTTAGTGCGT 60.004 57.895 3.32 0.00 0.00 5.24
2446 2620 1.677552 CGGTGGAGTTGGCCTTAGT 59.322 57.895 3.32 0.00 0.00 2.24
2530 2704 1.903877 ATCACAGGACAGGCCCGAAG 61.904 60.000 0.00 0.00 37.37 3.79
2584 2758 2.056906 GCGGACAGGATGGGGCTAAT 62.057 60.000 0.00 0.00 43.62 1.73
2614 2788 7.669427 TGTTTGGATATGAAAATATGGGCATC 58.331 34.615 0.00 0.00 0.00 3.91
2634 2808 5.738118 ATTTGGATGTGCAAACTTGTTTG 57.262 34.783 18.60 18.60 35.15 2.93
2963 3143 0.374758 ATGCACAACATGATCGTCGC 59.625 50.000 0.00 1.35 37.70 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.