Multiple sequence alignment - TraesCS5D01G313500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G313500 chr5D 100.000 3025 0 0 1 3025 408660839 408657815 0.000000e+00 5587.0
1 TraesCS5D01G313500 chr5D 93.076 1112 50 14 928 2026 408742602 408741505 0.000000e+00 1602.0
2 TraesCS5D01G313500 chr5D 78.822 883 116 45 1034 1888 408770118 408769279 2.070000e-146 529.0
3 TraesCS5D01G313500 chr5D 76.728 868 119 43 1068 1901 408649702 408648884 1.010000e-109 407.0
4 TraesCS5D01G313500 chr5D 89.767 215 15 6 723 936 408742984 408742776 4.970000e-68 268.0
5 TraesCS5D01G313500 chr5D 81.667 120 19 2 603 721 505560600 505560717 2.480000e-16 97.1
6 TraesCS5D01G313500 chr5D 92.857 42 2 1 660 701 393941330 393941290 3.260000e-05 60.2
7 TraesCS5D01G313500 chr5B 94.185 1307 42 9 943 2227 490298430 490297136 0.000000e+00 1962.0
8 TraesCS5D01G313500 chr5B 89.519 1517 97 36 723 2221 490359812 490358340 0.000000e+00 1864.0
9 TraesCS5D01G313500 chr5B 92.602 392 24 4 54 442 490300415 490300026 2.630000e-155 558.0
10 TraesCS5D01G313500 chr5B 94.136 324 18 1 2702 3025 490297142 490296820 2.710000e-135 492.0
11 TraesCS5D01G313500 chr5B 80.645 589 89 15 1335 1904 490611800 490611218 1.670000e-117 433.0
12 TraesCS5D01G313500 chr5B 87.456 287 31 3 530 813 490300027 490299743 2.910000e-85 326.0
13 TraesCS5D01G313500 chr5B 87.456 287 31 3 530 813 490312374 490312090 2.910000e-85 326.0
14 TraesCS5D01G313500 chr5B 86.711 301 23 6 175 463 490312647 490312352 4.870000e-83 318.0
15 TraesCS5D01G313500 chr5B 96.850 127 4 0 811 937 490299317 490299191 2.360000e-51 213.0
16 TraesCS5D01G313500 chr5B 93.431 137 9 0 54 190 490312712 490312576 1.420000e-48 204.0
17 TraesCS5D01G313500 chr5B 87.805 123 14 1 246 368 490360657 490360536 3.140000e-30 143.0
18 TraesCS5D01G313500 chr5A 90.229 1443 120 13 787 2221 515496356 515494927 0.000000e+00 1864.0
19 TraesCS5D01G313500 chr5A 86.763 1458 143 34 779 2221 516665019 516663597 0.000000e+00 1578.0
20 TraesCS5D01G313500 chr5A 87.240 1395 130 30 799 2177 516814624 516815986 0.000000e+00 1546.0
21 TraesCS5D01G313500 chr5A 78.118 882 120 42 1034 1886 519693964 519693127 2.710000e-135 492.0
22 TraesCS5D01G313500 chr6D 91.717 495 29 8 2221 2706 268023484 268022993 0.000000e+00 676.0
23 TraesCS5D01G313500 chr6D 89.820 501 30 11 2211 2703 102726700 102727187 9.210000e-175 623.0
24 TraesCS5D01G313500 chr6D 89.184 490 41 6 2221 2704 184826648 184826165 4.320000e-168 601.0
25 TraesCS5D01G313500 chr4D 90.688 494 32 8 2221 2706 205705243 205704756 0.000000e+00 645.0
26 TraesCS5D01G313500 chr3D 90.224 491 35 8 2221 2701 68434787 68434300 1.980000e-176 628.0
27 TraesCS5D01G313500 chr4A 89.463 503 39 7 2211 2706 331805527 331806022 9.210000e-175 623.0
28 TraesCS5D01G313500 chr2D 89.379 499 38 7 2208 2697 343266107 343265615 5.540000e-172 614.0
29 TraesCS5D01G313500 chr2D 89.655 87 8 1 440 526 538943422 538943507 3.190000e-20 110.0
30 TraesCS5D01G313500 chr1D 89.897 485 35 7 2228 2703 224239000 224238521 1.990000e-171 612.0
31 TraesCS5D01G313500 chr1D 92.308 91 6 1 439 529 402722725 402722636 8.800000e-26 128.0
32 TraesCS5D01G313500 chr1D 91.860 86 6 1 441 526 58438871 58438787 5.300000e-23 119.0
33 TraesCS5D01G313500 chr2A 88.735 506 40 8 2211 2706 468772511 468773009 1.200000e-168 603.0
34 TraesCS5D01G313500 chr1A 78.936 451 88 4 1453 1898 2075207 2075655 1.760000e-77 300.0
35 TraesCS5D01G313500 chr1A 75.304 575 104 25 1332 1901 547004632 547005173 1.080000e-59 241.0
36 TraesCS5D01G313500 chr3A 94.186 86 5 0 441 526 1628352 1628437 6.800000e-27 132.0
37 TraesCS5D01G313500 chr6A 89.000 100 9 2 2927 3025 159173020 159173118 4.100000e-24 122.0
38 TraesCS5D01G313500 chr2B 90.323 93 7 1 440 532 799979273 799979183 1.470000e-23 121.0
39 TraesCS5D01G313500 chr7D 89.247 93 9 1 434 526 124512763 124512854 6.850000e-22 115.0
40 TraesCS5D01G313500 chrUn 89.011 91 9 1 437 526 41907511 41907421 8.870000e-21 111.0
41 TraesCS5D01G313500 chr4B 89.011 91 8 2 437 526 540037773 540037684 8.870000e-21 111.0
42 TraesCS5D01G313500 chr7B 87.629 97 8 2 437 533 115386211 115386303 3.190000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G313500 chr5D 408657815 408660839 3024 True 5587.000000 5587 100.000000 1 3025 1 chr5D.!!$R3 3024
1 TraesCS5D01G313500 chr5D 408741505 408742984 1479 True 935.000000 1602 91.421500 723 2026 2 chr5D.!!$R5 1303
2 TraesCS5D01G313500 chr5D 408769279 408770118 839 True 529.000000 529 78.822000 1034 1888 1 chr5D.!!$R4 854
3 TraesCS5D01G313500 chr5D 408648884 408649702 818 True 407.000000 407 76.728000 1068 1901 1 chr5D.!!$R2 833
4 TraesCS5D01G313500 chr5B 490358340 490360657 2317 True 1003.500000 1864 88.662000 246 2221 2 chr5B.!!$R4 1975
5 TraesCS5D01G313500 chr5B 490296820 490300415 3595 True 710.200000 1962 93.045800 54 3025 5 chr5B.!!$R2 2971
6 TraesCS5D01G313500 chr5B 490611218 490611800 582 True 433.000000 433 80.645000 1335 1904 1 chr5B.!!$R1 569
7 TraesCS5D01G313500 chr5B 490312090 490312712 622 True 282.666667 326 89.199333 54 813 3 chr5B.!!$R3 759
8 TraesCS5D01G313500 chr5A 515494927 515496356 1429 True 1864.000000 1864 90.229000 787 2221 1 chr5A.!!$R1 1434
9 TraesCS5D01G313500 chr5A 516663597 516665019 1422 True 1578.000000 1578 86.763000 779 2221 1 chr5A.!!$R2 1442
10 TraesCS5D01G313500 chr5A 516814624 516815986 1362 False 1546.000000 1546 87.240000 799 2177 1 chr5A.!!$F1 1378
11 TraesCS5D01G313500 chr5A 519693127 519693964 837 True 492.000000 492 78.118000 1034 1886 1 chr5A.!!$R3 852
12 TraesCS5D01G313500 chr1A 547004632 547005173 541 False 241.000000 241 75.304000 1332 1901 1 chr1A.!!$F2 569

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
28 29 0.105778 GAGGGTCTGGCTGTAGATGC 59.894 60.0 0.0 0.0 0.0 3.91 F
29 30 0.326048 AGGGTCTGGCTGTAGATGCT 60.326 55.0 0.0 0.0 0.0 3.79 F
30 31 0.543749 GGGTCTGGCTGTAGATGCTT 59.456 55.0 0.0 0.0 0.0 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1935 3991 0.166161 CGTCTCGTGAGTCGTGATGT 59.834 55.000 8.09 0.0 42.49 3.06 R
1936 3992 0.442699 TCGTCTCGTGAGTCGTGATG 59.557 55.000 14.32 0.0 44.91 3.07 R
2054 4126 8.913656 GTTTACAATATACTCGTAGATCTTGGC 58.086 37.037 0.00 0.0 33.89 4.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.763902 GGGGGTTTGAGGGTCTGG 59.236 66.667 0.00 0.00 0.00 3.86
19 20 2.035783 GGGGTTTGAGGGTCTGGC 59.964 66.667 0.00 0.00 0.00 4.85
20 21 2.539081 GGGGTTTGAGGGTCTGGCT 61.539 63.158 0.00 0.00 0.00 4.75
21 22 1.303643 GGGTTTGAGGGTCTGGCTG 60.304 63.158 0.00 0.00 0.00 4.85
22 23 1.456287 GGTTTGAGGGTCTGGCTGT 59.544 57.895 0.00 0.00 0.00 4.40
23 24 0.690762 GGTTTGAGGGTCTGGCTGTA 59.309 55.000 0.00 0.00 0.00 2.74
24 25 1.339151 GGTTTGAGGGTCTGGCTGTAG 60.339 57.143 0.00 0.00 0.00 2.74
25 26 1.623811 GTTTGAGGGTCTGGCTGTAGA 59.376 52.381 0.00 0.00 0.00 2.59
26 27 2.237392 GTTTGAGGGTCTGGCTGTAGAT 59.763 50.000 0.00 0.00 0.00 1.98
27 28 1.489481 TGAGGGTCTGGCTGTAGATG 58.511 55.000 0.00 0.00 0.00 2.90
28 29 0.105778 GAGGGTCTGGCTGTAGATGC 59.894 60.000 0.00 0.00 0.00 3.91
29 30 0.326048 AGGGTCTGGCTGTAGATGCT 60.326 55.000 0.00 0.00 0.00 3.79
30 31 0.543749 GGGTCTGGCTGTAGATGCTT 59.456 55.000 0.00 0.00 0.00 3.91
31 32 1.065126 GGGTCTGGCTGTAGATGCTTT 60.065 52.381 0.00 0.00 0.00 3.51
32 33 2.619074 GGGTCTGGCTGTAGATGCTTTT 60.619 50.000 0.00 0.00 0.00 2.27
33 34 3.370527 GGGTCTGGCTGTAGATGCTTTTA 60.371 47.826 0.00 0.00 0.00 1.52
34 35 3.623510 GGTCTGGCTGTAGATGCTTTTAC 59.376 47.826 0.00 0.00 0.00 2.01
35 36 4.253685 GTCTGGCTGTAGATGCTTTTACA 58.746 43.478 3.42 3.42 0.00 2.41
36 37 4.878397 GTCTGGCTGTAGATGCTTTTACAT 59.122 41.667 3.81 0.00 0.00 2.29
37 38 4.877823 TCTGGCTGTAGATGCTTTTACATG 59.122 41.667 3.81 0.00 0.00 3.21
38 39 4.842574 TGGCTGTAGATGCTTTTACATGA 58.157 39.130 0.00 0.00 0.00 3.07
39 40 5.252547 TGGCTGTAGATGCTTTTACATGAA 58.747 37.500 0.00 0.00 0.00 2.57
40 41 5.887598 TGGCTGTAGATGCTTTTACATGAAT 59.112 36.000 0.00 0.00 0.00 2.57
41 42 6.183360 TGGCTGTAGATGCTTTTACATGAATG 60.183 38.462 0.00 0.00 0.00 2.67
42 43 6.204359 GCTGTAGATGCTTTTACATGAATGG 58.796 40.000 0.00 0.00 0.00 3.16
43 44 6.183360 GCTGTAGATGCTTTTACATGAATGGT 60.183 38.462 0.00 0.00 0.00 3.55
44 45 7.629222 GCTGTAGATGCTTTTACATGAATGGTT 60.629 37.037 0.00 0.00 0.00 3.67
45 46 8.121305 TGTAGATGCTTTTACATGAATGGTTT 57.879 30.769 0.00 0.00 0.00 3.27
46 47 8.584157 TGTAGATGCTTTTACATGAATGGTTTT 58.416 29.630 0.00 0.00 0.00 2.43
47 48 9.423061 GTAGATGCTTTTACATGAATGGTTTTT 57.577 29.630 0.00 0.00 0.00 1.94
183 184 3.499202 CCACCCCCTCTGATTTCCATATG 60.499 52.174 0.00 0.00 0.00 1.78
190 191 5.413833 CCCTCTGATTTCCATATGTGTATGC 59.586 44.000 1.24 0.00 37.06 3.14
227 228 2.136026 ACAAAAGAAGAGTCACCCCCT 58.864 47.619 0.00 0.00 0.00 4.79
228 229 2.106684 ACAAAAGAAGAGTCACCCCCTC 59.893 50.000 0.00 0.00 0.00 4.30
230 231 0.905337 AAGAAGAGTCACCCCCTCCG 60.905 60.000 0.00 0.00 0.00 4.63
364 367 4.934797 TTCTCCATCAAGGTCATTTCCT 57.065 40.909 0.00 0.00 39.84 3.36
440 1052 8.738645 AAAACATGACTCTCTTGTTAGAAAGT 57.261 30.769 0.00 0.00 41.84 2.66
441 1053 9.832445 AAAACATGACTCTCTTGTTAGAAAGTA 57.168 29.630 0.00 0.00 41.84 2.24
442 1054 8.819643 AACATGACTCTCTTGTTAGAAAGTAC 57.180 34.615 0.00 0.00 41.19 2.73
443 1055 8.184304 ACATGACTCTCTTGTTAGAAAGTACT 57.816 34.615 0.00 0.00 31.82 2.73
444 1056 8.301002 ACATGACTCTCTTGTTAGAAAGTACTC 58.699 37.037 0.00 0.00 31.82 2.59
445 1057 7.216973 TGACTCTCTTGTTAGAAAGTACTCC 57.783 40.000 0.00 0.00 31.82 3.85
446 1058 6.208994 TGACTCTCTTGTTAGAAAGTACTCCC 59.791 42.308 0.00 0.00 31.82 4.30
447 1059 6.316513 ACTCTCTTGTTAGAAAGTACTCCCT 58.683 40.000 0.00 0.00 29.85 4.20
448 1060 6.434965 ACTCTCTTGTTAGAAAGTACTCCCTC 59.565 42.308 0.00 0.00 29.85 4.30
449 1061 6.312529 TCTCTTGTTAGAAAGTACTCCCTCA 58.687 40.000 0.00 0.00 0.00 3.86
450 1062 6.434652 TCTCTTGTTAGAAAGTACTCCCTCAG 59.565 42.308 0.00 0.00 0.00 3.35
451 1063 6.075984 TCTTGTTAGAAAGTACTCCCTCAGT 58.924 40.000 0.00 0.00 39.41 3.41
452 1064 5.979288 TGTTAGAAAGTACTCCCTCAGTC 57.021 43.478 0.00 0.00 36.43 3.51
453 1065 4.771054 TGTTAGAAAGTACTCCCTCAGTCC 59.229 45.833 0.00 0.00 36.43 3.85
454 1066 2.822697 AGAAAGTACTCCCTCAGTCCC 58.177 52.381 0.00 0.00 36.43 4.46
455 1067 2.111972 AGAAAGTACTCCCTCAGTCCCA 59.888 50.000 0.00 0.00 36.43 4.37
456 1068 2.715763 AAGTACTCCCTCAGTCCCAA 57.284 50.000 0.00 0.00 36.43 4.12
457 1069 2.715763 AGTACTCCCTCAGTCCCAAA 57.284 50.000 0.00 0.00 36.43 3.28
458 1070 2.986050 AGTACTCCCTCAGTCCCAAAA 58.014 47.619 0.00 0.00 36.43 2.44
459 1071 3.532102 AGTACTCCCTCAGTCCCAAAAT 58.468 45.455 0.00 0.00 36.43 1.82
460 1072 2.887151 ACTCCCTCAGTCCCAAAATG 57.113 50.000 0.00 0.00 0.00 2.32
461 1073 2.065799 ACTCCCTCAGTCCCAAAATGT 58.934 47.619 0.00 0.00 0.00 2.71
462 1074 3.256704 ACTCCCTCAGTCCCAAAATGTA 58.743 45.455 0.00 0.00 0.00 2.29
463 1075 3.655777 ACTCCCTCAGTCCCAAAATGTAA 59.344 43.478 0.00 0.00 0.00 2.41
464 1076 4.263506 ACTCCCTCAGTCCCAAAATGTAAG 60.264 45.833 0.00 0.00 0.00 2.34
465 1077 3.913799 TCCCTCAGTCCCAAAATGTAAGA 59.086 43.478 0.00 0.00 0.00 2.10
466 1078 4.010349 CCCTCAGTCCCAAAATGTAAGAC 58.990 47.826 0.00 0.00 0.00 3.01
467 1079 3.684788 CCTCAGTCCCAAAATGTAAGACG 59.315 47.826 0.00 0.00 32.70 4.18
468 1080 3.071479 TCAGTCCCAAAATGTAAGACGC 58.929 45.455 0.00 0.00 32.70 5.19
469 1081 3.074412 CAGTCCCAAAATGTAAGACGCT 58.926 45.455 0.00 0.00 32.70 5.07
470 1082 3.502211 CAGTCCCAAAATGTAAGACGCTT 59.498 43.478 0.00 0.00 32.70 4.68
471 1083 4.023193 CAGTCCCAAAATGTAAGACGCTTT 60.023 41.667 0.00 0.00 32.70 3.51
472 1084 4.583073 AGTCCCAAAATGTAAGACGCTTTT 59.417 37.500 0.00 0.00 32.70 2.27
473 1085 5.068591 AGTCCCAAAATGTAAGACGCTTTTT 59.931 36.000 0.00 0.00 32.70 1.94
474 1086 6.263617 AGTCCCAAAATGTAAGACGCTTTTTA 59.736 34.615 0.00 0.00 32.70 1.52
475 1087 6.919115 GTCCCAAAATGTAAGACGCTTTTTAA 59.081 34.615 0.00 0.00 0.00 1.52
476 1088 6.919115 TCCCAAAATGTAAGACGCTTTTTAAC 59.081 34.615 0.00 0.00 0.00 2.01
477 1089 6.697892 CCCAAAATGTAAGACGCTTTTTAACA 59.302 34.615 0.00 0.00 0.00 2.41
478 1090 7.306341 CCCAAAATGTAAGACGCTTTTTAACAC 60.306 37.037 0.00 0.00 0.00 3.32
479 1091 7.434013 CCAAAATGTAAGACGCTTTTTAACACT 59.566 33.333 0.00 0.00 0.00 3.55
480 1092 9.440784 CAAAATGTAAGACGCTTTTTAACACTA 57.559 29.630 0.00 0.00 0.00 2.74
481 1093 8.998558 AAATGTAAGACGCTTTTTAACACTAC 57.001 30.769 0.00 0.00 0.00 2.73
482 1094 7.718272 ATGTAAGACGCTTTTTAACACTACA 57.282 32.000 0.00 0.00 0.00 2.74
483 1095 6.936374 TGTAAGACGCTTTTTAACACTACAC 58.064 36.000 0.00 0.00 0.00 2.90
484 1096 6.757947 TGTAAGACGCTTTTTAACACTACACT 59.242 34.615 0.00 0.00 0.00 3.55
485 1097 7.920151 TGTAAGACGCTTTTTAACACTACACTA 59.080 33.333 0.00 0.00 0.00 2.74
486 1098 7.404139 AAGACGCTTTTTAACACTACACTAG 57.596 36.000 0.00 0.00 0.00 2.57
487 1099 6.510536 AGACGCTTTTTAACACTACACTAGT 58.489 36.000 0.00 0.00 40.28 2.57
518 1130 8.786826 AAAAACATCTTACATTATGAGACGGA 57.213 30.769 0.00 0.00 0.00 4.69
519 1131 8.425577 AAAACATCTTACATTATGAGACGGAG 57.574 34.615 0.00 0.00 0.00 4.63
520 1132 6.090483 ACATCTTACATTATGAGACGGAGG 57.910 41.667 0.00 0.00 0.00 4.30
521 1133 5.011125 ACATCTTACATTATGAGACGGAGGG 59.989 44.000 0.00 0.00 0.00 4.30
522 1134 4.800023 TCTTACATTATGAGACGGAGGGA 58.200 43.478 0.00 0.00 0.00 4.20
523 1135 4.827835 TCTTACATTATGAGACGGAGGGAG 59.172 45.833 0.00 0.00 0.00 4.30
524 1136 3.033659 ACATTATGAGACGGAGGGAGT 57.966 47.619 0.00 0.00 0.00 3.85
525 1137 4.180377 ACATTATGAGACGGAGGGAGTA 57.820 45.455 0.00 0.00 0.00 2.59
526 1138 4.543689 ACATTATGAGACGGAGGGAGTAA 58.456 43.478 0.00 0.00 0.00 2.24
527 1139 5.148502 ACATTATGAGACGGAGGGAGTAAT 58.851 41.667 0.00 0.00 0.00 1.89
528 1140 6.312529 ACATTATGAGACGGAGGGAGTAATA 58.687 40.000 0.00 0.00 0.00 0.98
537 1149 7.931046 AGACGGAGGGAGTAATATAACTATCT 58.069 38.462 0.00 0.00 0.00 1.98
589 1201 0.610174 TCTAGCTCACCACTGCAAGG 59.390 55.000 0.00 3.39 39.30 3.61
617 1229 4.082523 GTGTAGCCTGCGCCCAGA 62.083 66.667 4.18 0.00 41.77 3.86
618 1230 3.774528 TGTAGCCTGCGCCCAGAG 61.775 66.667 4.18 0.00 41.77 3.35
632 1244 1.007336 CCAGAGTTCGAAACCCGTCG 61.007 60.000 0.00 0.00 42.48 5.12
645 1257 1.153628 CCGTCGGGAGCGAATTTCT 60.154 57.895 2.34 0.00 34.06 2.52
654 1266 2.168728 GGAGCGAATTTCTGGTACCTCT 59.831 50.000 14.36 0.00 0.00 3.69
655 1267 3.449632 GAGCGAATTTCTGGTACCTCTC 58.550 50.000 14.36 0.00 0.00 3.20
664 1276 0.546747 TGGTACCTCTCCTTGGGTGG 60.547 60.000 14.36 0.00 37.07 4.61
666 1278 1.615424 TACCTCTCCTTGGGTGGGC 60.615 63.158 0.00 0.00 37.07 5.36
669 1281 1.770324 CTCTCCTTGGGTGGGCTTT 59.230 57.895 0.00 0.00 0.00 3.51
691 1303 9.750125 GCTTTTTCTATAAAAATATGTCCTGGG 57.250 33.333 0.00 0.00 42.22 4.45
700 1312 1.200519 TATGTCCTGGGTACTGGTGC 58.799 55.000 0.00 0.00 37.05 5.01
701 1313 0.547712 ATGTCCTGGGTACTGGTGCT 60.548 55.000 0.00 0.00 37.05 4.40
702 1314 0.766674 TGTCCTGGGTACTGGTGCTT 60.767 55.000 0.00 0.00 37.05 3.91
709 1321 4.130118 CTGGGTACTGGTGCTTATGAATC 58.870 47.826 0.00 0.00 0.00 2.52
714 1326 7.291416 TGGGTACTGGTGCTTATGAATCTTATA 59.709 37.037 0.00 0.00 0.00 0.98
794 1412 7.588123 CGCATACTAGTAGTGACTAACTGATTG 59.412 40.741 13.29 0.00 40.26 2.67
804 1422 5.864474 GTGACTAACTGATTGGTGACTACAG 59.136 44.000 0.00 0.00 31.98 2.74
832 1877 6.283694 TGCTAGCTAACCTAATTGTCATCTG 58.716 40.000 17.23 0.00 0.00 2.90
960 2943 0.889186 GGTCTCAACCGCCAATGTGT 60.889 55.000 0.00 0.00 35.36 3.72
1135 3132 2.045926 GGGCAGTTCGAGCACCAT 60.046 61.111 12.27 0.00 0.00 3.55
1309 3310 4.345286 AGCCTCCCTGCCTCCACT 62.345 66.667 0.00 0.00 0.00 4.00
1318 3319 1.527433 CTGCCTCCACTGAGTCGACA 61.527 60.000 19.50 0.00 36.86 4.35
1850 3887 3.113979 CGCTGCAGCACGATGACA 61.114 61.111 36.03 0.00 42.21 3.58
1932 3988 4.132336 ACGTTATCTCGTGAGCAGGTATA 58.868 43.478 0.00 0.00 42.56 1.47
1933 3989 4.213694 ACGTTATCTCGTGAGCAGGTATAG 59.786 45.833 0.00 0.00 42.56 1.31
1934 3990 4.213694 CGTTATCTCGTGAGCAGGTATAGT 59.786 45.833 0.00 0.00 0.00 2.12
1935 3991 5.407691 CGTTATCTCGTGAGCAGGTATAGTA 59.592 44.000 0.00 0.00 0.00 1.82
1936 3992 6.601264 GTTATCTCGTGAGCAGGTATAGTAC 58.399 44.000 0.00 0.00 0.00 2.73
1983 4055 3.859627 GCGTACGGTAGATGCCACATATT 60.860 47.826 18.39 0.00 0.00 1.28
2054 4126 5.860182 GTGATTGATTCAACATCACTTGGTG 59.140 40.000 19.13 0.00 44.97 4.17
2221 4303 9.367444 AGAGTGCTTGTTATACTATTGTGTAAC 57.633 33.333 16.19 16.19 45.16 2.50
2222 4304 9.367444 GAGTGCTTGTTATACTATTGTGTAACT 57.633 33.333 20.97 6.18 45.17 2.24
2240 4322 6.845302 TGTAACTAGTAAGGTACACGACATG 58.155 40.000 0.00 0.00 46.63 3.21
2241 4323 4.367386 ACTAGTAAGGTACACGACATGC 57.633 45.455 0.00 0.00 0.00 4.06
2242 4324 3.760151 ACTAGTAAGGTACACGACATGCA 59.240 43.478 0.00 0.00 0.00 3.96
2243 4325 3.887621 AGTAAGGTACACGACATGCAT 57.112 42.857 0.00 0.00 0.00 3.96
2244 4326 4.202245 AGTAAGGTACACGACATGCATT 57.798 40.909 0.00 0.00 0.00 3.56
2245 4327 3.932710 AGTAAGGTACACGACATGCATTG 59.067 43.478 0.00 0.00 0.00 2.82
2246 4328 1.086696 AGGTACACGACATGCATTGC 58.913 50.000 0.00 0.46 0.00 3.56
2247 4329 0.801872 GGTACACGACATGCATTGCA 59.198 50.000 14.72 14.72 44.86 4.08
2262 4344 3.792401 CATTGCATGCATGAGATTTGGT 58.208 40.909 30.64 3.65 0.00 3.67
2263 4345 4.939271 CATTGCATGCATGAGATTTGGTA 58.061 39.130 30.64 1.36 0.00 3.25
2264 4346 5.353111 CATTGCATGCATGAGATTTGGTAA 58.647 37.500 30.64 6.62 0.00 2.85
2265 4347 4.374843 TGCATGCATGAGATTTGGTAAC 57.625 40.909 30.64 8.14 0.00 2.50
2266 4348 3.130869 TGCATGCATGAGATTTGGTAACC 59.869 43.478 30.64 7.94 0.00 2.85
2267 4349 3.130869 GCATGCATGAGATTTGGTAACCA 59.869 43.478 30.64 0.00 0.00 3.67
2268 4350 4.381825 GCATGCATGAGATTTGGTAACCAA 60.382 41.667 30.64 0.00 42.29 3.67
2307 4389 8.978874 ACCACATTATATCATGTAAGCTTTGA 57.021 30.769 3.20 2.44 35.51 2.69
2308 4390 9.060347 ACCACATTATATCATGTAAGCTTTGAG 57.940 33.333 3.20 0.00 35.51 3.02
2309 4391 9.060347 CCACATTATATCATGTAAGCTTTGAGT 57.940 33.333 3.20 0.00 35.51 3.41
2311 4393 9.836864 ACATTATATCATGTAAGCTTTGAGTCA 57.163 29.630 3.20 0.00 35.51 3.41
2413 4495 9.338291 CTATTTCAAGATTCATGGAATTATGCG 57.662 33.333 0.99 0.00 31.89 4.73
2414 4496 6.698008 TTCAAGATTCATGGAATTATGCGT 57.302 33.333 0.00 0.00 31.89 5.24
2415 4497 6.698008 TCAAGATTCATGGAATTATGCGTT 57.302 33.333 0.00 0.00 31.89 4.84
2416 4498 6.497437 TCAAGATTCATGGAATTATGCGTTG 58.503 36.000 0.00 0.00 31.89 4.10
2417 4499 6.095300 TCAAGATTCATGGAATTATGCGTTGT 59.905 34.615 0.00 0.00 31.89 3.32
2418 4500 7.281999 TCAAGATTCATGGAATTATGCGTTGTA 59.718 33.333 0.00 0.00 31.89 2.41
2419 4501 7.566760 AGATTCATGGAATTATGCGTTGTAA 57.433 32.000 0.00 0.00 31.89 2.41
2420 4502 7.995289 AGATTCATGGAATTATGCGTTGTAAA 58.005 30.769 0.00 0.00 31.89 2.01
2421 4503 8.131100 AGATTCATGGAATTATGCGTTGTAAAG 58.869 33.333 0.00 0.00 31.89 1.85
2422 4504 6.751514 TCATGGAATTATGCGTTGTAAAGT 57.248 33.333 0.00 0.00 0.00 2.66
2423 4505 7.851387 TCATGGAATTATGCGTTGTAAAGTA 57.149 32.000 0.00 0.00 0.00 2.24
2424 4506 8.445275 TCATGGAATTATGCGTTGTAAAGTAT 57.555 30.769 0.00 0.00 0.00 2.12
2425 4507 9.549078 TCATGGAATTATGCGTTGTAAAGTATA 57.451 29.630 0.00 0.00 0.00 1.47
2505 4587 4.911390 GGAAGATTCCAGAGAACAAAGGA 58.089 43.478 6.74 0.00 46.76 3.36
2506 4588 4.940654 GGAAGATTCCAGAGAACAAAGGAG 59.059 45.833 6.74 0.00 46.76 3.69
2507 4589 5.280215 GGAAGATTCCAGAGAACAAAGGAGA 60.280 44.000 6.74 0.00 46.76 3.71
2508 4590 5.832539 AGATTCCAGAGAACAAAGGAGAA 57.167 39.130 0.00 0.00 33.97 2.87
2509 4591 5.803552 AGATTCCAGAGAACAAAGGAGAAG 58.196 41.667 0.00 0.00 33.97 2.85
2510 4592 5.309282 AGATTCCAGAGAACAAAGGAGAAGT 59.691 40.000 0.00 0.00 33.97 3.01
2511 4593 4.342862 TCCAGAGAACAAAGGAGAAGTG 57.657 45.455 0.00 0.00 0.00 3.16
2512 4594 2.810852 CCAGAGAACAAAGGAGAAGTGC 59.189 50.000 0.00 0.00 0.00 4.40
2513 4595 3.495806 CCAGAGAACAAAGGAGAAGTGCT 60.496 47.826 0.00 0.00 0.00 4.40
2514 4596 4.133078 CAGAGAACAAAGGAGAAGTGCTT 58.867 43.478 0.00 0.00 35.50 3.91
2515 4597 4.024218 CAGAGAACAAAGGAGAAGTGCTTG 60.024 45.833 0.00 0.00 33.98 4.01
2516 4598 3.879892 GAGAACAAAGGAGAAGTGCTTGT 59.120 43.478 0.00 0.00 33.98 3.16
2517 4599 3.629398 AGAACAAAGGAGAAGTGCTTGTG 59.371 43.478 0.00 0.00 33.98 3.33
2518 4600 3.004752 ACAAAGGAGAAGTGCTTGTGT 57.995 42.857 0.00 0.00 33.98 3.72
2519 4601 3.356290 ACAAAGGAGAAGTGCTTGTGTT 58.644 40.909 0.00 0.00 33.98 3.32
2520 4602 3.763897 ACAAAGGAGAAGTGCTTGTGTTT 59.236 39.130 0.00 0.00 33.98 2.83
2521 4603 4.220602 ACAAAGGAGAAGTGCTTGTGTTTT 59.779 37.500 0.00 0.00 33.98 2.43
2522 4604 4.376340 AAGGAGAAGTGCTTGTGTTTTG 57.624 40.909 0.00 0.00 32.14 2.44
2523 4605 3.620488 AGGAGAAGTGCTTGTGTTTTGA 58.380 40.909 0.00 0.00 0.00 2.69
2524 4606 3.629398 AGGAGAAGTGCTTGTGTTTTGAG 59.371 43.478 0.00 0.00 0.00 3.02
2525 4607 3.243201 GGAGAAGTGCTTGTGTTTTGAGG 60.243 47.826 0.00 0.00 0.00 3.86
2526 4608 3.356290 AGAAGTGCTTGTGTTTTGAGGT 58.644 40.909 0.00 0.00 0.00 3.85
2527 4609 3.763897 AGAAGTGCTTGTGTTTTGAGGTT 59.236 39.130 0.00 0.00 0.00 3.50
2528 4610 4.220602 AGAAGTGCTTGTGTTTTGAGGTTT 59.779 37.500 0.00 0.00 0.00 3.27
2529 4611 3.848726 AGTGCTTGTGTTTTGAGGTTTG 58.151 40.909 0.00 0.00 0.00 2.93
2530 4612 3.258123 AGTGCTTGTGTTTTGAGGTTTGT 59.742 39.130 0.00 0.00 0.00 2.83
2531 4613 3.367630 GTGCTTGTGTTTTGAGGTTTGTG 59.632 43.478 0.00 0.00 0.00 3.33
2532 4614 2.348362 GCTTGTGTTTTGAGGTTTGTGC 59.652 45.455 0.00 0.00 0.00 4.57
2533 4615 3.583806 CTTGTGTTTTGAGGTTTGTGCA 58.416 40.909 0.00 0.00 0.00 4.57
2534 4616 3.883830 TGTGTTTTGAGGTTTGTGCAT 57.116 38.095 0.00 0.00 0.00 3.96
2535 4617 4.199432 TGTGTTTTGAGGTTTGTGCATT 57.801 36.364 0.00 0.00 0.00 3.56
2536 4618 5.330455 TGTGTTTTGAGGTTTGTGCATTA 57.670 34.783 0.00 0.00 0.00 1.90
2537 4619 5.911752 TGTGTTTTGAGGTTTGTGCATTAT 58.088 33.333 0.00 0.00 0.00 1.28
2538 4620 5.752472 TGTGTTTTGAGGTTTGTGCATTATG 59.248 36.000 0.00 0.00 0.00 1.90
2539 4621 4.749099 TGTTTTGAGGTTTGTGCATTATGC 59.251 37.500 10.65 10.65 45.29 3.14
2540 4622 4.870123 TTTGAGGTTTGTGCATTATGCT 57.130 36.364 18.44 0.00 45.31 3.79
2541 4623 4.870123 TTGAGGTTTGTGCATTATGCTT 57.130 36.364 18.44 0.00 45.31 3.91
2542 4624 5.973899 TTGAGGTTTGTGCATTATGCTTA 57.026 34.783 18.44 4.39 45.31 3.09
2543 4625 5.973899 TGAGGTTTGTGCATTATGCTTAA 57.026 34.783 18.44 10.17 45.31 1.85
2544 4626 5.953183 TGAGGTTTGTGCATTATGCTTAAG 58.047 37.500 18.44 0.00 45.31 1.85
2545 4627 5.476599 TGAGGTTTGTGCATTATGCTTAAGT 59.523 36.000 18.44 2.94 45.31 2.24
2546 4628 6.015519 TGAGGTTTGTGCATTATGCTTAAGTT 60.016 34.615 18.44 0.00 45.31 2.66
2547 4629 6.758254 AGGTTTGTGCATTATGCTTAAGTTT 58.242 32.000 18.44 0.00 45.31 2.66
2548 4630 7.891561 AGGTTTGTGCATTATGCTTAAGTTTA 58.108 30.769 18.44 0.00 45.31 2.01
2549 4631 8.364142 AGGTTTGTGCATTATGCTTAAGTTTAA 58.636 29.630 18.44 3.36 45.31 1.52
2550 4632 8.432359 GGTTTGTGCATTATGCTTAAGTTTAAC 58.568 33.333 18.44 5.27 45.31 2.01
2551 4633 8.432359 GTTTGTGCATTATGCTTAAGTTTAACC 58.568 33.333 18.44 0.00 45.31 2.85
2552 4634 7.220741 TGTGCATTATGCTTAAGTTTAACCA 57.779 32.000 18.44 0.00 45.31 3.67
2553 4635 7.835822 TGTGCATTATGCTTAAGTTTAACCAT 58.164 30.769 18.44 0.63 45.31 3.55
2554 4636 7.973388 TGTGCATTATGCTTAAGTTTAACCATC 59.027 33.333 18.44 1.94 45.31 3.51
2555 4637 7.165812 GTGCATTATGCTTAAGTTTAACCATCG 59.834 37.037 18.44 0.00 45.31 3.84
2556 4638 7.066404 TGCATTATGCTTAAGTTTAACCATCGA 59.934 33.333 18.44 0.00 45.31 3.59
2557 4639 7.587757 GCATTATGCTTAAGTTTAACCATCGAG 59.412 37.037 10.27 0.00 40.96 4.04
2558 4640 8.612619 CATTATGCTTAAGTTTAACCATCGAGT 58.387 33.333 4.02 0.00 0.00 4.18
2559 4641 6.663944 ATGCTTAAGTTTAACCATCGAGTC 57.336 37.500 4.02 0.00 0.00 3.36
2560 4642 5.790593 TGCTTAAGTTTAACCATCGAGTCT 58.209 37.500 4.02 0.00 0.00 3.24
2561 4643 6.228258 TGCTTAAGTTTAACCATCGAGTCTT 58.772 36.000 4.02 0.00 0.00 3.01
2562 4644 6.367969 TGCTTAAGTTTAACCATCGAGTCTTC 59.632 38.462 4.02 0.00 0.00 2.87
2563 4645 6.590677 GCTTAAGTTTAACCATCGAGTCTTCT 59.409 38.462 4.02 0.00 0.00 2.85
2564 4646 7.758528 GCTTAAGTTTAACCATCGAGTCTTCTA 59.241 37.037 4.02 0.00 0.00 2.10
2565 4647 8.976986 TTAAGTTTAACCATCGAGTCTTCTAC 57.023 34.615 0.00 0.00 0.00 2.59
2566 4648 6.585695 AGTTTAACCATCGAGTCTTCTACA 57.414 37.500 0.00 0.00 0.00 2.74
2567 4649 7.171630 AGTTTAACCATCGAGTCTTCTACAT 57.828 36.000 0.00 0.00 0.00 2.29
2568 4650 7.036220 AGTTTAACCATCGAGTCTTCTACATG 58.964 38.462 0.00 0.00 0.00 3.21
2569 4651 6.525578 TTAACCATCGAGTCTTCTACATGT 57.474 37.500 2.69 2.69 0.00 3.21
2570 4652 4.377839 ACCATCGAGTCTTCTACATGTG 57.622 45.455 9.11 0.00 0.00 3.21
2571 4653 3.131223 ACCATCGAGTCTTCTACATGTGG 59.869 47.826 9.11 5.55 0.00 4.17
2572 4654 2.941453 TCGAGTCTTCTACATGTGGC 57.059 50.000 9.11 0.00 0.00 5.01
2573 4655 2.167662 TCGAGTCTTCTACATGTGGCA 58.832 47.619 9.11 0.00 0.00 4.92
2574 4656 2.164422 TCGAGTCTTCTACATGTGGCAG 59.836 50.000 9.11 5.44 0.00 4.85
2575 4657 2.164422 CGAGTCTTCTACATGTGGCAGA 59.836 50.000 9.11 8.18 0.00 4.26
2576 4658 3.367395 CGAGTCTTCTACATGTGGCAGAA 60.367 47.826 12.78 10.62 0.00 3.02
2577 4659 4.679106 CGAGTCTTCTACATGTGGCAGAAT 60.679 45.833 12.78 11.96 0.00 2.40
2578 4660 4.764172 AGTCTTCTACATGTGGCAGAATC 58.236 43.478 12.78 2.73 0.00 2.52
2579 4661 4.469227 AGTCTTCTACATGTGGCAGAATCT 59.531 41.667 12.78 4.90 0.00 2.40
2580 4662 4.569966 GTCTTCTACATGTGGCAGAATCTG 59.430 45.833 12.78 5.78 34.12 2.90
2581 4663 3.548745 TCTACATGTGGCAGAATCTGG 57.451 47.619 12.66 0.00 31.21 3.86
2582 4664 2.840038 TCTACATGTGGCAGAATCTGGT 59.160 45.455 12.66 2.80 31.21 4.00
2583 4665 1.830279 ACATGTGGCAGAATCTGGTG 58.170 50.000 12.66 0.00 31.21 4.17
2584 4666 1.100510 CATGTGGCAGAATCTGGTGG 58.899 55.000 12.66 0.00 31.21 4.61
2585 4667 0.994247 ATGTGGCAGAATCTGGTGGA 59.006 50.000 12.66 0.00 31.21 4.02
2586 4668 0.770499 TGTGGCAGAATCTGGTGGAA 59.230 50.000 12.66 0.00 31.21 3.53
2587 4669 1.355381 TGTGGCAGAATCTGGTGGAAT 59.645 47.619 12.66 0.00 31.21 3.01
2588 4670 1.747355 GTGGCAGAATCTGGTGGAATG 59.253 52.381 12.66 0.00 31.21 2.67
2589 4671 1.355381 TGGCAGAATCTGGTGGAATGT 59.645 47.619 12.66 0.00 31.21 2.71
2590 4672 2.575735 TGGCAGAATCTGGTGGAATGTA 59.424 45.455 12.66 0.00 31.21 2.29
2591 4673 2.945668 GGCAGAATCTGGTGGAATGTAC 59.054 50.000 12.66 0.00 31.21 2.90
2592 4674 3.609853 GCAGAATCTGGTGGAATGTACA 58.390 45.455 12.66 0.00 31.21 2.90
2593 4675 4.202441 GCAGAATCTGGTGGAATGTACAT 58.798 43.478 12.66 1.41 31.21 2.29
2594 4676 4.036027 GCAGAATCTGGTGGAATGTACATG 59.964 45.833 9.63 0.00 31.21 3.21
2595 4677 5.430886 CAGAATCTGGTGGAATGTACATGA 58.569 41.667 9.63 0.45 0.00 3.07
2596 4678 6.060136 CAGAATCTGGTGGAATGTACATGAT 58.940 40.000 9.63 3.01 0.00 2.45
2597 4679 7.219322 CAGAATCTGGTGGAATGTACATGATA 58.781 38.462 9.63 0.00 0.00 2.15
2598 4680 7.881751 CAGAATCTGGTGGAATGTACATGATAT 59.118 37.037 9.63 0.00 0.00 1.63
2599 4681 8.099537 AGAATCTGGTGGAATGTACATGATATC 58.900 37.037 9.63 2.80 0.00 1.63
2600 4682 6.114187 TCTGGTGGAATGTACATGATATCC 57.886 41.667 9.63 12.82 0.00 2.59
2601 4683 5.606329 TCTGGTGGAATGTACATGATATCCA 59.394 40.000 18.89 18.89 0.00 3.41
2602 4684 6.101005 TCTGGTGGAATGTACATGATATCCAA 59.899 38.462 22.72 11.62 0.00 3.53
2603 4685 6.061441 TGGTGGAATGTACATGATATCCAAC 58.939 40.000 25.81 25.81 34.55 3.77
2604 4686 5.179368 GGTGGAATGTACATGATATCCAACG 59.821 44.000 22.72 0.00 0.00 4.10
2605 4687 5.179368 GTGGAATGTACATGATATCCAACGG 59.821 44.000 22.72 0.00 0.00 4.44
2606 4688 4.154195 GGAATGTACATGATATCCAACGGC 59.846 45.833 16.27 0.00 0.00 5.68
2607 4689 3.120321 TGTACATGATATCCAACGGCC 57.880 47.619 0.00 0.00 0.00 6.13
2608 4690 2.436173 TGTACATGATATCCAACGGCCA 59.564 45.455 2.24 0.00 0.00 5.36
2609 4691 2.260844 ACATGATATCCAACGGCCAG 57.739 50.000 2.24 0.00 0.00 4.85
2610 4692 1.490490 ACATGATATCCAACGGCCAGT 59.510 47.619 2.24 0.00 0.00 4.00
2611 4693 2.703536 ACATGATATCCAACGGCCAGTA 59.296 45.455 2.24 0.00 0.00 2.74
2612 4694 3.244215 ACATGATATCCAACGGCCAGTAG 60.244 47.826 2.24 0.00 0.00 2.57
2613 4695 2.394632 TGATATCCAACGGCCAGTAGT 58.605 47.619 2.24 0.00 0.00 2.73
2614 4696 2.102420 TGATATCCAACGGCCAGTAGTG 59.898 50.000 2.24 0.00 0.00 2.74
2615 4697 0.177141 TATCCAACGGCCAGTAGTGC 59.823 55.000 2.24 0.00 0.00 4.40
2616 4698 1.553690 ATCCAACGGCCAGTAGTGCT 61.554 55.000 2.24 0.00 0.00 4.40
2617 4699 1.741770 CCAACGGCCAGTAGTGCTC 60.742 63.158 2.24 0.00 0.00 4.26
2618 4700 2.094659 CAACGGCCAGTAGTGCTCG 61.095 63.158 2.24 8.56 0.00 5.03
2619 4701 2.273179 AACGGCCAGTAGTGCTCGA 61.273 57.895 2.24 0.00 0.00 4.04
2620 4702 1.812686 AACGGCCAGTAGTGCTCGAA 61.813 55.000 2.24 0.00 0.00 3.71
2621 4703 1.141881 CGGCCAGTAGTGCTCGAAT 59.858 57.895 2.24 0.00 0.00 3.34
2622 4704 0.460284 CGGCCAGTAGTGCTCGAATT 60.460 55.000 2.24 0.00 0.00 2.17
2623 4705 1.739067 GGCCAGTAGTGCTCGAATTT 58.261 50.000 0.00 0.00 0.00 1.82
2624 4706 1.398390 GGCCAGTAGTGCTCGAATTTG 59.602 52.381 0.00 0.00 0.00 2.32
2625 4707 1.202076 GCCAGTAGTGCTCGAATTTGC 60.202 52.381 0.00 0.00 0.00 3.68
2626 4708 1.398390 CCAGTAGTGCTCGAATTTGCC 59.602 52.381 0.00 0.00 0.00 4.52
2627 4709 2.076100 CAGTAGTGCTCGAATTTGCCA 58.924 47.619 0.00 0.00 0.00 4.92
2628 4710 2.679837 CAGTAGTGCTCGAATTTGCCAT 59.320 45.455 0.00 0.00 0.00 4.40
2629 4711 2.939103 AGTAGTGCTCGAATTTGCCATC 59.061 45.455 0.00 0.00 0.00 3.51
2630 4712 2.119801 AGTGCTCGAATTTGCCATCT 57.880 45.000 0.00 0.00 0.00 2.90
2631 4713 2.012673 AGTGCTCGAATTTGCCATCTC 58.987 47.619 0.00 0.00 0.00 2.75
2632 4714 2.012673 GTGCTCGAATTTGCCATCTCT 58.987 47.619 0.00 0.00 0.00 3.10
2633 4715 2.011947 TGCTCGAATTTGCCATCTCTG 58.988 47.619 0.00 0.00 0.00 3.35
2634 4716 2.012673 GCTCGAATTTGCCATCTCTGT 58.987 47.619 0.00 0.00 0.00 3.41
2635 4717 3.198068 GCTCGAATTTGCCATCTCTGTA 58.802 45.455 0.00 0.00 0.00 2.74
2636 4718 3.001736 GCTCGAATTTGCCATCTCTGTAC 59.998 47.826 0.00 0.00 0.00 2.90
2637 4719 3.531538 TCGAATTTGCCATCTCTGTACC 58.468 45.455 0.00 0.00 0.00 3.34
2638 4720 2.285220 CGAATTTGCCATCTCTGTACCG 59.715 50.000 0.00 0.00 0.00 4.02
2639 4721 3.270877 GAATTTGCCATCTCTGTACCGT 58.729 45.455 0.00 0.00 0.00 4.83
2640 4722 2.380084 TTTGCCATCTCTGTACCGTC 57.620 50.000 0.00 0.00 0.00 4.79
2641 4723 0.172578 TTGCCATCTCTGTACCGTCG 59.827 55.000 0.00 0.00 0.00 5.12
2642 4724 1.065928 GCCATCTCTGTACCGTCGG 59.934 63.158 10.48 10.48 0.00 4.79
2643 4725 1.381928 GCCATCTCTGTACCGTCGGA 61.382 60.000 20.51 0.00 0.00 4.55
2644 4726 1.319541 CCATCTCTGTACCGTCGGAT 58.680 55.000 20.51 4.87 0.00 4.18
2645 4727 1.681793 CCATCTCTGTACCGTCGGATT 59.318 52.381 20.51 0.00 0.00 3.01
2646 4728 2.543861 CCATCTCTGTACCGTCGGATTG 60.544 54.545 20.51 5.18 0.00 2.67
2647 4729 1.100510 TCTCTGTACCGTCGGATTGG 58.899 55.000 20.51 5.55 0.00 3.16
2648 4730 0.527817 CTCTGTACCGTCGGATTGGC 60.528 60.000 20.51 3.48 0.00 4.52
2649 4731 0.968901 TCTGTACCGTCGGATTGGCT 60.969 55.000 20.51 0.00 0.00 4.75
2650 4732 0.108329 CTGTACCGTCGGATTGGCTT 60.108 55.000 20.51 0.00 0.00 4.35
2651 4733 0.108520 TGTACCGTCGGATTGGCTTC 60.109 55.000 20.51 0.00 0.00 3.86
2652 4734 0.108520 GTACCGTCGGATTGGCTTCA 60.109 55.000 20.51 0.00 0.00 3.02
2653 4735 0.828022 TACCGTCGGATTGGCTTCAT 59.172 50.000 20.51 0.00 0.00 2.57
2654 4736 0.462047 ACCGTCGGATTGGCTTCATC 60.462 55.000 20.51 0.00 0.00 2.92
2655 4737 1.160329 CCGTCGGATTGGCTTCATCC 61.160 60.000 4.91 1.96 0.00 3.51
2656 4738 0.461870 CGTCGGATTGGCTTCATCCA 60.462 55.000 10.34 0.00 34.22 3.41
2662 4744 3.715871 TTGGCTTCATCCAACGACA 57.284 47.368 0.00 0.00 40.92 4.35
2663 4745 1.974265 TTGGCTTCATCCAACGACAA 58.026 45.000 0.00 0.00 40.92 3.18
2664 4746 1.974265 TGGCTTCATCCAACGACAAA 58.026 45.000 0.00 0.00 32.18 2.83
2665 4747 1.606668 TGGCTTCATCCAACGACAAAC 59.393 47.619 0.00 0.00 32.18 2.93
2666 4748 1.880027 GGCTTCATCCAACGACAAACT 59.120 47.619 0.00 0.00 0.00 2.66
2667 4749 2.293399 GGCTTCATCCAACGACAAACTT 59.707 45.455 0.00 0.00 0.00 2.66
2668 4750 3.243401 GGCTTCATCCAACGACAAACTTT 60.243 43.478 0.00 0.00 0.00 2.66
2669 4751 3.975035 GCTTCATCCAACGACAAACTTTC 59.025 43.478 0.00 0.00 0.00 2.62
2670 4752 4.497340 GCTTCATCCAACGACAAACTTTCA 60.497 41.667 0.00 0.00 0.00 2.69
2671 4753 5.568685 TTCATCCAACGACAAACTTTCAA 57.431 34.783 0.00 0.00 0.00 2.69
2672 4754 5.568685 TCATCCAACGACAAACTTTCAAA 57.431 34.783 0.00 0.00 0.00 2.69
2673 4755 5.336744 TCATCCAACGACAAACTTTCAAAC 58.663 37.500 0.00 0.00 0.00 2.93
2674 4756 5.124776 TCATCCAACGACAAACTTTCAAACT 59.875 36.000 0.00 0.00 0.00 2.66
2675 4757 5.379732 TCCAACGACAAACTTTCAAACTT 57.620 34.783 0.00 0.00 0.00 2.66
2676 4758 6.497785 TCCAACGACAAACTTTCAAACTTA 57.502 33.333 0.00 0.00 0.00 2.24
2677 4759 7.090953 TCCAACGACAAACTTTCAAACTTAT 57.909 32.000 0.00 0.00 0.00 1.73
2678 4760 7.540299 TCCAACGACAAACTTTCAAACTTATT 58.460 30.769 0.00 0.00 0.00 1.40
2679 4761 7.698970 TCCAACGACAAACTTTCAAACTTATTC 59.301 33.333 0.00 0.00 0.00 1.75
2680 4762 7.305190 CCAACGACAAACTTTCAAACTTATTCG 60.305 37.037 0.00 0.00 0.00 3.34
2681 4763 5.679792 ACGACAAACTTTCAAACTTATTCGC 59.320 36.000 0.00 0.00 0.00 4.70
2682 4764 5.679355 CGACAAACTTTCAAACTTATTCGCA 59.321 36.000 0.00 0.00 0.00 5.10
2683 4765 6.343924 CGACAAACTTTCAAACTTATTCGCAC 60.344 38.462 0.00 0.00 0.00 5.34
2684 4766 6.326375 ACAAACTTTCAAACTTATTCGCACA 58.674 32.000 0.00 0.00 0.00 4.57
2685 4767 6.252655 ACAAACTTTCAAACTTATTCGCACAC 59.747 34.615 0.00 0.00 0.00 3.82
2686 4768 5.751243 ACTTTCAAACTTATTCGCACACT 57.249 34.783 0.00 0.00 0.00 3.55
2687 4769 6.854496 ACTTTCAAACTTATTCGCACACTA 57.146 33.333 0.00 0.00 0.00 2.74
2688 4770 7.435068 ACTTTCAAACTTATTCGCACACTAT 57.565 32.000 0.00 0.00 0.00 2.12
2689 4771 8.542497 ACTTTCAAACTTATTCGCACACTATA 57.458 30.769 0.00 0.00 0.00 1.31
2690 4772 9.162764 ACTTTCAAACTTATTCGCACACTATAT 57.837 29.630 0.00 0.00 0.00 0.86
2693 4775 8.812147 TCAAACTTATTCGCACACTATATAGG 57.188 34.615 14.25 5.81 0.00 2.57
2694 4776 7.870954 TCAAACTTATTCGCACACTATATAGGG 59.129 37.037 10.61 10.61 0.00 3.53
2695 4777 6.282199 ACTTATTCGCACACTATATAGGGG 57.718 41.667 16.40 9.16 0.00 4.79
2696 4778 5.778750 ACTTATTCGCACACTATATAGGGGT 59.221 40.000 16.40 9.77 0.00 4.95
2697 4779 6.950041 ACTTATTCGCACACTATATAGGGGTA 59.050 38.462 16.40 1.06 0.00 3.69
2698 4780 7.618512 ACTTATTCGCACACTATATAGGGGTAT 59.381 37.037 16.40 7.62 0.00 2.73
2699 4781 9.128404 CTTATTCGCACACTATATAGGGGTATA 57.872 37.037 16.40 6.81 0.00 1.47
2700 4782 7.584122 ATTCGCACACTATATAGGGGTATAG 57.416 40.000 16.40 3.46 39.48 1.31
2701 4783 6.317663 TCGCACACTATATAGGGGTATAGA 57.682 41.667 16.40 5.58 37.83 1.98
2705 4787 9.955102 CGCACACTATATAGGGGTATAGATATA 57.045 37.037 16.40 0.00 37.83 0.86
2717 4799 7.513781 AGGGGTATAGATATATACATGCATGCA 59.486 37.037 26.53 25.04 35.25 3.96
2824 4906 8.924511 TCAAGAGAACCAACTTAAGATCAATT 57.075 30.769 10.09 0.00 0.00 2.32
2877 4959 9.871238 ATCGACAGTACACTAGTTTTGATATTT 57.129 29.630 0.00 0.00 0.00 1.40
2887 4969 8.116753 CACTAGTTTTGATATTTGGAACGCTAG 58.883 37.037 0.00 0.00 0.00 3.42
2896 4978 1.153349 GGAACGCTAGGGGCTCTTG 60.153 63.158 11.95 0.00 39.13 3.02
2899 4981 1.617947 AACGCTAGGGGCTCTTGGAG 61.618 60.000 11.95 0.00 39.13 3.86
2924 5006 8.926710 AGTCAGATAGATTTTGTTACAAACGAG 58.073 33.333 10.28 0.00 0.00 4.18
2931 5013 6.987992 AGATTTTGTTACAAACGAGTGGAGTA 59.012 34.615 10.28 0.00 0.00 2.59
2932 5014 6.981762 TTTTGTTACAAACGAGTGGAGTAA 57.018 33.333 10.28 0.00 0.00 2.24
2974 5056 5.874093 AGGATTTCTTGCTTCTTTCTCTCA 58.126 37.500 0.00 0.00 0.00 3.27
2984 5066 4.321718 CTTCTTTCTCTCATGCAGAACCA 58.678 43.478 6.46 0.00 29.30 3.67
2998 5080 3.427233 GCAGAACCATGCATGAGACTTTC 60.427 47.826 28.31 18.79 45.77 2.62
3014 5096 3.350833 ACTTTCATCTTGCATGACTCCC 58.649 45.455 4.14 0.00 0.00 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.763902 CCAGACCCTCAAACCCCC 59.236 66.667 0.00 0.00 0.00 5.40
2 3 2.035783 GCCAGACCCTCAAACCCC 59.964 66.667 0.00 0.00 0.00 4.95
3 4 1.303643 CAGCCAGACCCTCAAACCC 60.304 63.158 0.00 0.00 0.00 4.11
4 5 0.690762 TACAGCCAGACCCTCAAACC 59.309 55.000 0.00 0.00 0.00 3.27
5 6 1.623811 TCTACAGCCAGACCCTCAAAC 59.376 52.381 0.00 0.00 0.00 2.93
6 7 2.024176 TCTACAGCCAGACCCTCAAA 57.976 50.000 0.00 0.00 0.00 2.69
7 8 1.833630 CATCTACAGCCAGACCCTCAA 59.166 52.381 0.00 0.00 0.00 3.02
8 9 1.489481 CATCTACAGCCAGACCCTCA 58.511 55.000 0.00 0.00 0.00 3.86
9 10 0.105778 GCATCTACAGCCAGACCCTC 59.894 60.000 0.00 0.00 0.00 4.30
10 11 0.326048 AGCATCTACAGCCAGACCCT 60.326 55.000 0.00 0.00 0.00 4.34
11 12 0.543749 AAGCATCTACAGCCAGACCC 59.456 55.000 0.00 0.00 0.00 4.46
12 13 2.409948 AAAGCATCTACAGCCAGACC 57.590 50.000 0.00 0.00 0.00 3.85
13 14 4.253685 TGTAAAAGCATCTACAGCCAGAC 58.746 43.478 0.00 0.00 0.00 3.51
14 15 4.551702 TGTAAAAGCATCTACAGCCAGA 57.448 40.909 0.00 0.00 0.00 3.86
15 16 4.877823 TCATGTAAAAGCATCTACAGCCAG 59.122 41.667 0.00 0.00 31.81 4.85
16 17 4.842574 TCATGTAAAAGCATCTACAGCCA 58.157 39.130 0.00 0.00 31.81 4.75
17 18 5.818136 TTCATGTAAAAGCATCTACAGCC 57.182 39.130 0.00 0.00 31.81 4.85
18 19 6.183360 ACCATTCATGTAAAAGCATCTACAGC 60.183 38.462 0.00 0.00 31.81 4.40
19 20 7.325660 ACCATTCATGTAAAAGCATCTACAG 57.674 36.000 0.00 0.00 31.81 2.74
20 21 7.701539 AACCATTCATGTAAAAGCATCTACA 57.298 32.000 0.00 0.00 32.79 2.74
21 22 8.986477 AAAACCATTCATGTAAAAGCATCTAC 57.014 30.769 0.00 0.00 0.00 2.59
114 115 5.245751 ACCTGCAAATACACATGGAAAATGA 59.754 36.000 0.00 0.00 0.00 2.57
150 151 1.609501 GGGGGTGGCCCTTCTTTTC 60.610 63.158 0.00 0.00 44.66 2.29
227 228 5.746284 TGAAACATACATATGGAAACCGGA 58.254 37.500 9.46 0.00 38.00 5.14
228 229 6.443934 TTGAAACATACATATGGAAACCGG 57.556 37.500 7.80 0.00 38.00 5.28
230 231 9.868277 TGATTTTGAAACATACATATGGAAACC 57.132 29.630 7.80 0.00 38.00 3.27
373 978 4.769345 TTTTTCTGGCCAAAATGACCTT 57.231 36.364 7.01 0.00 0.00 3.50
440 1052 3.256704 ACATTTTGGGACTGAGGGAGTA 58.743 45.455 0.00 0.00 33.83 2.59
441 1053 2.065799 ACATTTTGGGACTGAGGGAGT 58.934 47.619 0.00 0.00 37.76 3.85
442 1054 2.887151 ACATTTTGGGACTGAGGGAG 57.113 50.000 0.00 0.00 0.00 4.30
443 1055 3.913799 TCTTACATTTTGGGACTGAGGGA 59.086 43.478 0.00 0.00 0.00 4.20
444 1056 4.010349 GTCTTACATTTTGGGACTGAGGG 58.990 47.826 0.00 0.00 0.00 4.30
445 1057 3.684788 CGTCTTACATTTTGGGACTGAGG 59.315 47.826 0.00 0.00 0.00 3.86
446 1058 3.125316 GCGTCTTACATTTTGGGACTGAG 59.875 47.826 0.00 0.00 0.00 3.35
447 1059 3.071479 GCGTCTTACATTTTGGGACTGA 58.929 45.455 0.00 0.00 0.00 3.41
448 1060 3.074412 AGCGTCTTACATTTTGGGACTG 58.926 45.455 0.00 0.00 0.00 3.51
449 1061 3.418684 AGCGTCTTACATTTTGGGACT 57.581 42.857 0.00 0.00 0.00 3.85
450 1062 4.499037 AAAGCGTCTTACATTTTGGGAC 57.501 40.909 0.00 0.00 0.00 4.46
451 1063 5.523438 AAAAAGCGTCTTACATTTTGGGA 57.477 34.783 0.00 0.00 0.00 4.37
452 1064 6.697892 TGTTAAAAAGCGTCTTACATTTTGGG 59.302 34.615 0.00 0.00 0.00 4.12
453 1065 7.434013 AGTGTTAAAAAGCGTCTTACATTTTGG 59.566 33.333 0.00 0.00 0.00 3.28
454 1066 8.335256 AGTGTTAAAAAGCGTCTTACATTTTG 57.665 30.769 0.00 0.00 0.00 2.44
455 1067 9.442033 GTAGTGTTAAAAAGCGTCTTACATTTT 57.558 29.630 0.00 0.00 0.00 1.82
456 1068 8.614346 TGTAGTGTTAAAAAGCGTCTTACATTT 58.386 29.630 0.00 0.00 0.00 2.32
457 1069 8.066000 GTGTAGTGTTAAAAAGCGTCTTACATT 58.934 33.333 0.00 0.00 0.00 2.71
458 1070 7.440255 AGTGTAGTGTTAAAAAGCGTCTTACAT 59.560 33.333 0.00 0.00 0.00 2.29
459 1071 6.757947 AGTGTAGTGTTAAAAAGCGTCTTACA 59.242 34.615 0.00 0.00 0.00 2.41
460 1072 7.170240 AGTGTAGTGTTAAAAAGCGTCTTAC 57.830 36.000 0.00 0.00 0.00 2.34
461 1073 8.137437 ACTAGTGTAGTGTTAAAAAGCGTCTTA 58.863 33.333 0.00 0.00 37.69 2.10
462 1074 6.982724 ACTAGTGTAGTGTTAAAAAGCGTCTT 59.017 34.615 0.00 0.00 37.69 3.01
463 1075 6.510536 ACTAGTGTAGTGTTAAAAAGCGTCT 58.489 36.000 0.00 0.00 37.69 4.18
464 1076 6.760161 ACTAGTGTAGTGTTAAAAAGCGTC 57.240 37.500 0.00 0.00 37.69 5.19
493 1105 8.786826 TCCGTCTCATAATGTAAGATGTTTTT 57.213 30.769 0.00 0.00 0.00 1.94
494 1106 7.495934 CCTCCGTCTCATAATGTAAGATGTTTT 59.504 37.037 0.00 0.00 0.00 2.43
495 1107 6.986817 CCTCCGTCTCATAATGTAAGATGTTT 59.013 38.462 0.00 0.00 0.00 2.83
496 1108 6.463049 CCCTCCGTCTCATAATGTAAGATGTT 60.463 42.308 0.00 0.00 0.00 2.71
497 1109 5.011125 CCCTCCGTCTCATAATGTAAGATGT 59.989 44.000 0.00 0.00 0.00 3.06
498 1110 5.243954 TCCCTCCGTCTCATAATGTAAGATG 59.756 44.000 0.00 0.00 0.00 2.90
499 1111 5.394738 TCCCTCCGTCTCATAATGTAAGAT 58.605 41.667 0.00 0.00 0.00 2.40
500 1112 4.800023 TCCCTCCGTCTCATAATGTAAGA 58.200 43.478 0.00 0.00 0.00 2.10
501 1113 4.585162 ACTCCCTCCGTCTCATAATGTAAG 59.415 45.833 0.00 0.00 0.00 2.34
502 1114 4.543689 ACTCCCTCCGTCTCATAATGTAA 58.456 43.478 0.00 0.00 0.00 2.41
503 1115 4.180377 ACTCCCTCCGTCTCATAATGTA 57.820 45.455 0.00 0.00 0.00 2.29
504 1116 3.033659 ACTCCCTCCGTCTCATAATGT 57.966 47.619 0.00 0.00 0.00 2.71
505 1117 5.730296 ATTACTCCCTCCGTCTCATAATG 57.270 43.478 0.00 0.00 0.00 1.90
506 1118 8.968969 GTTATATTACTCCCTCCGTCTCATAAT 58.031 37.037 0.00 0.00 0.00 1.28
507 1119 8.168725 AGTTATATTACTCCCTCCGTCTCATAA 58.831 37.037 0.00 0.00 0.00 1.90
508 1120 7.696981 AGTTATATTACTCCCTCCGTCTCATA 58.303 38.462 0.00 0.00 0.00 2.15
509 1121 6.553857 AGTTATATTACTCCCTCCGTCTCAT 58.446 40.000 0.00 0.00 0.00 2.90
510 1122 5.950023 AGTTATATTACTCCCTCCGTCTCA 58.050 41.667 0.00 0.00 0.00 3.27
511 1123 8.048514 AGATAGTTATATTACTCCCTCCGTCTC 58.951 40.741 0.00 0.00 0.00 3.36
512 1124 7.931046 AGATAGTTATATTACTCCCTCCGTCT 58.069 38.462 0.00 0.00 0.00 4.18
513 1125 9.850198 ATAGATAGTTATATTACTCCCTCCGTC 57.150 37.037 0.00 0.00 0.00 4.79
537 1149 6.832520 ACCTGTGCATACATGTTGAAAATA 57.167 33.333 2.30 0.00 32.68 1.40
569 1181 1.209019 CCTTGCAGTGGTGAGCTAGAT 59.791 52.381 0.00 0.00 36.01 1.98
589 1201 0.609131 AGGCTACACCATTGTGCACC 60.609 55.000 15.69 0.00 46.86 5.01
593 1205 2.257286 GCGCAGGCTACACCATTGTG 62.257 60.000 0.30 0.00 43.14 3.33
594 1206 2.040544 GCGCAGGCTACACCATTGT 61.041 57.895 0.30 0.00 43.14 2.71
617 1229 2.151049 CTCCCGACGGGTTTCGAACT 62.151 60.000 31.54 0.00 44.74 3.01
618 1230 1.735559 CTCCCGACGGGTTTCGAAC 60.736 63.158 31.54 0.00 44.74 3.95
632 1244 1.209747 AGGTACCAGAAATTCGCTCCC 59.790 52.381 15.94 0.00 0.00 4.30
645 1257 0.546747 CCACCCAAGGAGAGGTACCA 60.547 60.000 15.94 0.00 33.52 3.25
654 1266 0.560688 AGAAAAAGCCCACCCAAGGA 59.439 50.000 0.00 0.00 0.00 3.36
655 1267 2.302587 TAGAAAAAGCCCACCCAAGG 57.697 50.000 0.00 0.00 0.00 3.61
664 1276 9.750125 CCAGGACATATTTTTATAGAAAAAGCC 57.250 33.333 12.99 9.02 45.33 4.35
721 1333 3.254166 AGTTAAATTGCAGTGGTGAGCTG 59.746 43.478 0.00 0.00 37.06 4.24
769 1381 7.863375 CCAATCAGTTAGTCACTACTAGTATGC 59.137 40.741 2.33 2.11 39.36 3.14
794 1412 2.494073 AGCTAGCAGTTCTGTAGTCACC 59.506 50.000 18.83 0.00 0.00 4.02
804 1422 6.106673 TGACAATTAGGTTAGCTAGCAGTTC 58.893 40.000 18.83 3.78 0.00 3.01
832 1877 4.083057 GCTTGAGATCTTGAAGGAACCAAC 60.083 45.833 14.21 0.00 0.00 3.77
960 2943 3.391626 TGGCCATGTATTTATACCGGTGA 59.608 43.478 19.93 1.17 32.33 4.02
1135 3132 3.613193 CGAACTCGATAAACTGGTGGTGA 60.613 47.826 0.00 0.00 43.02 4.02
1932 3988 2.415857 GTCTCGTGAGTCGTGATGTACT 59.584 50.000 0.00 0.00 42.49 2.73
1933 3989 2.771689 GTCTCGTGAGTCGTGATGTAC 58.228 52.381 0.00 0.00 42.49 2.90
1934 3990 1.392510 CGTCTCGTGAGTCGTGATGTA 59.607 52.381 8.09 0.00 42.49 2.29
1935 3991 0.166161 CGTCTCGTGAGTCGTGATGT 59.834 55.000 8.09 0.00 42.49 3.06
1936 3992 0.442699 TCGTCTCGTGAGTCGTGATG 59.557 55.000 14.32 0.00 44.91 3.07
2054 4126 8.913656 GTTTACAATATACTCGTAGATCTTGGC 58.086 37.037 0.00 0.00 33.89 4.52
2063 4135 8.054152 TGGTCACTGTTTACAATATACTCGTA 57.946 34.615 0.00 0.00 0.00 3.43
2064 4136 6.927416 TGGTCACTGTTTACAATATACTCGT 58.073 36.000 0.00 0.00 0.00 4.18
2065 4137 7.009265 CACTGGTCACTGTTTACAATATACTCG 59.991 40.741 0.00 0.00 0.00 4.18
2066 4138 8.033038 TCACTGGTCACTGTTTACAATATACTC 58.967 37.037 0.00 0.00 0.00 2.59
2221 4303 4.365899 TGCATGTCGTGTACCTTACTAG 57.634 45.455 0.00 0.00 0.00 2.57
2222 4304 4.994907 ATGCATGTCGTGTACCTTACTA 57.005 40.909 0.00 0.00 0.00 1.82
2223 4305 3.887621 ATGCATGTCGTGTACCTTACT 57.112 42.857 0.00 0.00 0.00 2.24
2224 4306 3.485216 GCAATGCATGTCGTGTACCTTAC 60.485 47.826 0.00 0.00 0.00 2.34
2225 4307 2.675844 GCAATGCATGTCGTGTACCTTA 59.324 45.455 0.00 0.00 0.00 2.69
2226 4308 1.468520 GCAATGCATGTCGTGTACCTT 59.531 47.619 0.00 0.00 0.00 3.50
2227 4309 1.086696 GCAATGCATGTCGTGTACCT 58.913 50.000 0.00 0.00 0.00 3.08
2228 4310 0.801872 TGCAATGCATGTCGTGTACC 59.198 50.000 2.72 0.00 31.71 3.34
2242 4324 5.353938 GTTACCAAATCTCATGCATGCAAT 58.646 37.500 26.68 10.92 0.00 3.56
2243 4325 4.381825 GGTTACCAAATCTCATGCATGCAA 60.382 41.667 26.68 8.62 0.00 4.08
2244 4326 3.130869 GGTTACCAAATCTCATGCATGCA 59.869 43.478 25.04 25.04 0.00 3.96
2245 4327 3.130869 TGGTTACCAAATCTCATGCATGC 59.869 43.478 22.25 11.82 0.00 4.06
2246 4328 4.987408 TGGTTACCAAATCTCATGCATG 57.013 40.909 21.07 21.07 0.00 4.06
2247 4329 5.999205 TTTGGTTACCAAATCTCATGCAT 57.001 34.783 23.91 0.00 46.92 3.96
2282 4364 8.978874 TCAAAGCTTACATGATATAATGTGGT 57.021 30.769 15.11 3.11 40.93 4.16
2283 4365 9.060347 ACTCAAAGCTTACATGATATAATGTGG 57.940 33.333 15.11 9.13 40.93 4.17
2285 4367 9.836864 TGACTCAAAGCTTACATGATATAATGT 57.163 29.630 10.66 10.66 43.21 2.71
2387 4469 9.338291 CGCATAATTCCATGAATCTTGAAATAG 57.662 33.333 0.00 0.00 30.29 1.73
2388 4470 8.849168 ACGCATAATTCCATGAATCTTGAAATA 58.151 29.630 0.00 0.00 30.29 1.40
2389 4471 7.719483 ACGCATAATTCCATGAATCTTGAAAT 58.281 30.769 0.00 0.00 30.29 2.17
2390 4472 7.099266 ACGCATAATTCCATGAATCTTGAAA 57.901 32.000 0.00 0.00 30.29 2.69
2391 4473 6.698008 ACGCATAATTCCATGAATCTTGAA 57.302 33.333 0.00 0.00 30.29 2.69
2392 4474 6.095300 ACAACGCATAATTCCATGAATCTTGA 59.905 34.615 0.00 0.00 30.29 3.02
2393 4475 6.267817 ACAACGCATAATTCCATGAATCTTG 58.732 36.000 0.00 0.00 30.29 3.02
2394 4476 6.455360 ACAACGCATAATTCCATGAATCTT 57.545 33.333 0.00 0.00 30.29 2.40
2395 4477 7.566760 TTACAACGCATAATTCCATGAATCT 57.433 32.000 0.00 0.00 30.29 2.40
2396 4478 7.915397 ACTTTACAACGCATAATTCCATGAATC 59.085 33.333 0.00 0.00 30.29 2.52
2397 4479 7.771183 ACTTTACAACGCATAATTCCATGAAT 58.229 30.769 0.00 0.00 33.25 2.57
2398 4480 7.151999 ACTTTACAACGCATAATTCCATGAA 57.848 32.000 0.00 0.00 0.00 2.57
2399 4481 6.751514 ACTTTACAACGCATAATTCCATGA 57.248 33.333 0.00 0.00 0.00 3.07
2484 4566 5.799213 TCTCCTTTGTTCTCTGGAATCTTC 58.201 41.667 0.00 0.00 33.71 2.87
2485 4567 5.832539 TCTCCTTTGTTCTCTGGAATCTT 57.167 39.130 0.00 0.00 33.71 2.40
2486 4568 5.309282 ACTTCTCCTTTGTTCTCTGGAATCT 59.691 40.000 0.00 0.00 33.71 2.40
2487 4569 5.411053 CACTTCTCCTTTGTTCTCTGGAATC 59.589 44.000 0.00 0.00 33.71 2.52
2488 4570 5.312079 CACTTCTCCTTTGTTCTCTGGAAT 58.688 41.667 0.00 0.00 33.71 3.01
2489 4571 4.708177 CACTTCTCCTTTGTTCTCTGGAA 58.292 43.478 0.00 0.00 0.00 3.53
2490 4572 3.495100 GCACTTCTCCTTTGTTCTCTGGA 60.495 47.826 0.00 0.00 0.00 3.86
2491 4573 2.810852 GCACTTCTCCTTTGTTCTCTGG 59.189 50.000 0.00 0.00 0.00 3.86
2492 4574 3.737850 AGCACTTCTCCTTTGTTCTCTG 58.262 45.455 0.00 0.00 0.00 3.35
2493 4575 4.133078 CAAGCACTTCTCCTTTGTTCTCT 58.867 43.478 0.00 0.00 0.00 3.10
2494 4576 3.879892 ACAAGCACTTCTCCTTTGTTCTC 59.120 43.478 0.00 0.00 0.00 2.87
2495 4577 3.629398 CACAAGCACTTCTCCTTTGTTCT 59.371 43.478 0.00 0.00 0.00 3.01
2496 4578 3.378427 ACACAAGCACTTCTCCTTTGTTC 59.622 43.478 0.00 0.00 0.00 3.18
2497 4579 3.356290 ACACAAGCACTTCTCCTTTGTT 58.644 40.909 0.00 0.00 0.00 2.83
2498 4580 3.004752 ACACAAGCACTTCTCCTTTGT 57.995 42.857 0.00 0.00 0.00 2.83
2499 4581 4.376340 AAACACAAGCACTTCTCCTTTG 57.624 40.909 0.00 0.00 0.00 2.77
2500 4582 4.462483 TCAAAACACAAGCACTTCTCCTTT 59.538 37.500 0.00 0.00 0.00 3.11
2501 4583 4.016444 TCAAAACACAAGCACTTCTCCTT 58.984 39.130 0.00 0.00 0.00 3.36
2502 4584 3.620488 TCAAAACACAAGCACTTCTCCT 58.380 40.909 0.00 0.00 0.00 3.69
2503 4585 3.243201 CCTCAAAACACAAGCACTTCTCC 60.243 47.826 0.00 0.00 0.00 3.71
2504 4586 3.378427 ACCTCAAAACACAAGCACTTCTC 59.622 43.478 0.00 0.00 0.00 2.87
2505 4587 3.356290 ACCTCAAAACACAAGCACTTCT 58.644 40.909 0.00 0.00 0.00 2.85
2506 4588 3.782889 ACCTCAAAACACAAGCACTTC 57.217 42.857 0.00 0.00 0.00 3.01
2507 4589 4.244862 CAAACCTCAAAACACAAGCACTT 58.755 39.130 0.00 0.00 0.00 3.16
2508 4590 3.258123 ACAAACCTCAAAACACAAGCACT 59.742 39.130 0.00 0.00 0.00 4.40
2509 4591 3.367630 CACAAACCTCAAAACACAAGCAC 59.632 43.478 0.00 0.00 0.00 4.40
2510 4592 3.583806 CACAAACCTCAAAACACAAGCA 58.416 40.909 0.00 0.00 0.00 3.91
2511 4593 2.348362 GCACAAACCTCAAAACACAAGC 59.652 45.455 0.00 0.00 0.00 4.01
2512 4594 3.583806 TGCACAAACCTCAAAACACAAG 58.416 40.909 0.00 0.00 0.00 3.16
2513 4595 3.667497 TGCACAAACCTCAAAACACAA 57.333 38.095 0.00 0.00 0.00 3.33
2514 4596 3.883830 ATGCACAAACCTCAAAACACA 57.116 38.095 0.00 0.00 0.00 3.72
2515 4597 5.333263 GCATAATGCACAAACCTCAAAACAC 60.333 40.000 0.00 0.00 44.26 3.32
2516 4598 4.749099 GCATAATGCACAAACCTCAAAACA 59.251 37.500 0.00 0.00 44.26 2.83
2517 4599 5.268107 GCATAATGCACAAACCTCAAAAC 57.732 39.130 0.00 0.00 44.26 2.43
2538 4620 6.590677 AGAAGACTCGATGGTTAAACTTAAGC 59.409 38.462 1.29 4.78 40.52 3.09
2539 4621 9.074443 GTAGAAGACTCGATGGTTAAACTTAAG 57.926 37.037 0.00 0.00 0.00 1.85
2540 4622 8.579006 TGTAGAAGACTCGATGGTTAAACTTAA 58.421 33.333 0.00 0.00 0.00 1.85
2541 4623 8.114331 TGTAGAAGACTCGATGGTTAAACTTA 57.886 34.615 0.00 0.00 0.00 2.24
2542 4624 6.989659 TGTAGAAGACTCGATGGTTAAACTT 58.010 36.000 0.00 0.00 0.00 2.66
2543 4625 6.585695 TGTAGAAGACTCGATGGTTAAACT 57.414 37.500 0.00 0.00 0.00 2.66
2544 4626 6.812160 ACATGTAGAAGACTCGATGGTTAAAC 59.188 38.462 0.00 0.00 0.00 2.01
2545 4627 6.811665 CACATGTAGAAGACTCGATGGTTAAA 59.188 38.462 0.00 0.00 0.00 1.52
2546 4628 6.330278 CACATGTAGAAGACTCGATGGTTAA 58.670 40.000 0.00 0.00 0.00 2.01
2547 4629 5.163550 CCACATGTAGAAGACTCGATGGTTA 60.164 44.000 0.00 0.00 0.00 2.85
2548 4630 4.382040 CCACATGTAGAAGACTCGATGGTT 60.382 45.833 0.00 0.00 0.00 3.67
2549 4631 3.131223 CCACATGTAGAAGACTCGATGGT 59.869 47.826 0.00 0.00 0.00 3.55
2550 4632 3.711086 CCACATGTAGAAGACTCGATGG 58.289 50.000 0.00 0.00 0.00 3.51
2551 4633 3.119291 GCCACATGTAGAAGACTCGATG 58.881 50.000 0.00 0.00 0.00 3.84
2552 4634 2.760650 TGCCACATGTAGAAGACTCGAT 59.239 45.455 0.00 0.00 0.00 3.59
2553 4635 2.164422 CTGCCACATGTAGAAGACTCGA 59.836 50.000 0.00 0.00 0.00 4.04
2554 4636 2.164422 TCTGCCACATGTAGAAGACTCG 59.836 50.000 0.00 0.00 32.25 4.18
2555 4637 3.876274 TCTGCCACATGTAGAAGACTC 57.124 47.619 0.00 0.00 32.25 3.36
2556 4638 4.469227 AGATTCTGCCACATGTAGAAGACT 59.531 41.667 13.48 11.95 46.80 3.24
2557 4639 4.569966 CAGATTCTGCCACATGTAGAAGAC 59.430 45.833 13.48 10.40 46.80 3.01
2558 4640 4.383444 CCAGATTCTGCCACATGTAGAAGA 60.383 45.833 13.48 6.77 46.80 2.87
2559 4641 3.875727 CCAGATTCTGCCACATGTAGAAG 59.124 47.826 13.48 4.47 46.80 2.85
2561 4643 2.840038 ACCAGATTCTGCCACATGTAGA 59.160 45.455 8.23 0.00 33.47 2.59
2562 4644 2.941064 CACCAGATTCTGCCACATGTAG 59.059 50.000 8.23 0.00 0.00 2.74
2563 4645 2.356022 CCACCAGATTCTGCCACATGTA 60.356 50.000 8.23 0.00 0.00 2.29
2564 4646 1.615116 CCACCAGATTCTGCCACATGT 60.615 52.381 8.23 0.00 0.00 3.21
2565 4647 1.100510 CCACCAGATTCTGCCACATG 58.899 55.000 8.23 0.00 0.00 3.21
2566 4648 0.994247 TCCACCAGATTCTGCCACAT 59.006 50.000 8.23 0.00 0.00 3.21
2567 4649 0.770499 TTCCACCAGATTCTGCCACA 59.230 50.000 8.23 0.00 0.00 4.17
2568 4650 1.747355 CATTCCACCAGATTCTGCCAC 59.253 52.381 8.23 0.00 0.00 5.01
2569 4651 1.355381 ACATTCCACCAGATTCTGCCA 59.645 47.619 8.23 0.00 0.00 4.92
2570 4652 2.134789 ACATTCCACCAGATTCTGCC 57.865 50.000 8.23 0.00 0.00 4.85
2571 4653 3.609853 TGTACATTCCACCAGATTCTGC 58.390 45.455 8.23 0.00 0.00 4.26
2572 4654 5.430886 TCATGTACATTCCACCAGATTCTG 58.569 41.667 5.37 6.70 0.00 3.02
2573 4655 5.698741 TCATGTACATTCCACCAGATTCT 57.301 39.130 5.37 0.00 0.00 2.40
2574 4656 7.335422 GGATATCATGTACATTCCACCAGATTC 59.665 40.741 16.27 9.73 0.00 2.52
2575 4657 7.170965 GGATATCATGTACATTCCACCAGATT 58.829 38.462 16.27 3.34 0.00 2.40
2576 4658 6.273026 TGGATATCATGTACATTCCACCAGAT 59.727 38.462 18.89 13.09 0.00 2.90
2577 4659 5.606329 TGGATATCATGTACATTCCACCAGA 59.394 40.000 18.89 7.41 0.00 3.86
2578 4660 5.868454 TGGATATCATGTACATTCCACCAG 58.132 41.667 18.89 2.47 0.00 4.00
2579 4661 5.903198 TGGATATCATGTACATTCCACCA 57.097 39.130 18.89 15.13 0.00 4.17
2580 4662 5.179368 CGTTGGATATCATGTACATTCCACC 59.821 44.000 21.44 15.83 33.20 4.61
2581 4663 5.179368 CCGTTGGATATCATGTACATTCCAC 59.821 44.000 21.44 16.22 33.20 4.02
2582 4664 5.304778 CCGTTGGATATCATGTACATTCCA 58.695 41.667 18.89 18.89 0.00 3.53
2583 4665 4.154195 GCCGTTGGATATCATGTACATTCC 59.846 45.833 14.85 14.85 0.00 3.01
2584 4666 4.154195 GGCCGTTGGATATCATGTACATTC 59.846 45.833 5.37 0.88 0.00 2.67
2585 4667 4.072131 GGCCGTTGGATATCATGTACATT 58.928 43.478 5.37 0.00 0.00 2.71
2586 4668 3.072330 TGGCCGTTGGATATCATGTACAT 59.928 43.478 1.41 1.41 0.00 2.29
2587 4669 2.436173 TGGCCGTTGGATATCATGTACA 59.564 45.455 4.83 0.00 0.00 2.90
2588 4670 3.067106 CTGGCCGTTGGATATCATGTAC 58.933 50.000 4.83 0.00 0.00 2.90
2589 4671 2.703536 ACTGGCCGTTGGATATCATGTA 59.296 45.455 4.83 0.00 0.00 2.29
2590 4672 1.490490 ACTGGCCGTTGGATATCATGT 59.510 47.619 4.83 0.00 0.00 3.21
2591 4673 2.260844 ACTGGCCGTTGGATATCATG 57.739 50.000 4.83 0.00 0.00 3.07
2592 4674 2.972713 ACTACTGGCCGTTGGATATCAT 59.027 45.455 4.83 0.00 0.00 2.45
2593 4675 2.102420 CACTACTGGCCGTTGGATATCA 59.898 50.000 4.83 0.00 0.00 2.15
2594 4676 2.755650 CACTACTGGCCGTTGGATATC 58.244 52.381 0.00 0.00 0.00 1.63
2595 4677 1.202651 GCACTACTGGCCGTTGGATAT 60.203 52.381 0.00 0.00 0.00 1.63
2596 4678 0.177141 GCACTACTGGCCGTTGGATA 59.823 55.000 0.00 0.00 0.00 2.59
2597 4679 1.078426 GCACTACTGGCCGTTGGAT 60.078 57.895 0.00 0.00 0.00 3.41
2598 4680 2.167398 GAGCACTACTGGCCGTTGGA 62.167 60.000 0.00 0.00 0.00 3.53
2599 4681 1.741770 GAGCACTACTGGCCGTTGG 60.742 63.158 0.00 0.00 0.00 3.77
2600 4682 2.094659 CGAGCACTACTGGCCGTTG 61.095 63.158 0.00 2.87 0.00 4.10
2601 4683 1.812686 TTCGAGCACTACTGGCCGTT 61.813 55.000 0.00 0.00 0.00 4.44
2602 4684 1.605058 ATTCGAGCACTACTGGCCGT 61.605 55.000 0.00 1.25 0.00 5.68
2603 4685 0.460284 AATTCGAGCACTACTGGCCG 60.460 55.000 0.00 0.00 0.00 6.13
2604 4686 1.398390 CAAATTCGAGCACTACTGGCC 59.602 52.381 0.00 0.00 0.00 5.36
2605 4687 1.202076 GCAAATTCGAGCACTACTGGC 60.202 52.381 0.00 0.00 0.00 4.85
2606 4688 1.398390 GGCAAATTCGAGCACTACTGG 59.602 52.381 0.00 0.00 0.00 4.00
2607 4689 2.076100 TGGCAAATTCGAGCACTACTG 58.924 47.619 0.00 0.00 0.00 2.74
2608 4690 2.472695 TGGCAAATTCGAGCACTACT 57.527 45.000 0.00 0.00 0.00 2.57
2609 4691 2.939103 AGATGGCAAATTCGAGCACTAC 59.061 45.455 0.00 0.00 0.00 2.73
2610 4692 3.118629 AGAGATGGCAAATTCGAGCACTA 60.119 43.478 0.00 0.00 0.00 2.74
2611 4693 2.012673 GAGATGGCAAATTCGAGCACT 58.987 47.619 0.00 0.00 0.00 4.40
2612 4694 2.012673 AGAGATGGCAAATTCGAGCAC 58.987 47.619 0.00 0.00 0.00 4.40
2613 4695 2.011947 CAGAGATGGCAAATTCGAGCA 58.988 47.619 0.00 0.00 0.00 4.26
2614 4696 2.012673 ACAGAGATGGCAAATTCGAGC 58.987 47.619 0.00 0.00 0.00 5.03
2615 4697 3.557595 GGTACAGAGATGGCAAATTCGAG 59.442 47.826 0.00 0.00 0.00 4.04
2616 4698 3.531538 GGTACAGAGATGGCAAATTCGA 58.468 45.455 0.00 0.00 0.00 3.71
2617 4699 2.285220 CGGTACAGAGATGGCAAATTCG 59.715 50.000 0.00 0.00 0.00 3.34
2618 4700 3.270877 ACGGTACAGAGATGGCAAATTC 58.729 45.455 0.00 0.00 0.00 2.17
2619 4701 3.270877 GACGGTACAGAGATGGCAAATT 58.729 45.455 0.00 0.00 0.00 1.82
2620 4702 2.738643 CGACGGTACAGAGATGGCAAAT 60.739 50.000 0.00 0.00 0.00 2.32
2621 4703 1.403647 CGACGGTACAGAGATGGCAAA 60.404 52.381 0.00 0.00 0.00 3.68
2622 4704 0.172578 CGACGGTACAGAGATGGCAA 59.827 55.000 0.00 0.00 0.00 4.52
2623 4705 1.663379 CCGACGGTACAGAGATGGCA 61.663 60.000 5.48 0.00 0.00 4.92
2624 4706 1.065928 CCGACGGTACAGAGATGGC 59.934 63.158 5.48 0.00 0.00 4.40
2625 4707 1.319541 ATCCGACGGTACAGAGATGG 58.680 55.000 14.79 0.00 0.00 3.51
2626 4708 2.543861 CCAATCCGACGGTACAGAGATG 60.544 54.545 14.79 2.93 0.00 2.90
2627 4709 1.681793 CCAATCCGACGGTACAGAGAT 59.318 52.381 14.79 0.00 0.00 2.75
2628 4710 1.100510 CCAATCCGACGGTACAGAGA 58.899 55.000 14.79 0.00 0.00 3.10
2629 4711 0.527817 GCCAATCCGACGGTACAGAG 60.528 60.000 14.79 0.57 0.00 3.35
2630 4712 0.968901 AGCCAATCCGACGGTACAGA 60.969 55.000 14.79 0.00 0.00 3.41
2631 4713 0.108329 AAGCCAATCCGACGGTACAG 60.108 55.000 14.79 3.14 0.00 2.74
2632 4714 0.108520 GAAGCCAATCCGACGGTACA 60.109 55.000 14.79 0.00 0.00 2.90
2633 4715 0.108520 TGAAGCCAATCCGACGGTAC 60.109 55.000 14.79 0.12 0.00 3.34
2634 4716 0.828022 ATGAAGCCAATCCGACGGTA 59.172 50.000 14.79 0.72 0.00 4.02
2635 4717 0.462047 GATGAAGCCAATCCGACGGT 60.462 55.000 14.79 0.00 0.00 4.83
2636 4718 1.160329 GGATGAAGCCAATCCGACGG 61.160 60.000 7.84 7.84 0.00 4.79
2637 4719 0.461870 TGGATGAAGCCAATCCGACG 60.462 55.000 5.67 0.00 37.29 5.12
2638 4720 1.750193 TTGGATGAAGCCAATCCGAC 58.250 50.000 0.00 0.00 42.75 4.79
2644 4726 1.974265 TTGTCGTTGGATGAAGCCAA 58.026 45.000 0.00 0.00 45.28 4.52
2645 4727 1.606668 GTTTGTCGTTGGATGAAGCCA 59.393 47.619 0.00 0.00 35.78 4.75
2646 4728 1.880027 AGTTTGTCGTTGGATGAAGCC 59.120 47.619 0.00 0.00 0.00 4.35
2647 4729 3.626028 AAGTTTGTCGTTGGATGAAGC 57.374 42.857 0.00 0.00 0.00 3.86
2648 4730 5.168526 TGAAAGTTTGTCGTTGGATGAAG 57.831 39.130 0.00 0.00 0.00 3.02
2649 4731 5.568685 TTGAAAGTTTGTCGTTGGATGAA 57.431 34.783 0.00 0.00 0.00 2.57
2650 4732 5.124776 AGTTTGAAAGTTTGTCGTTGGATGA 59.875 36.000 0.00 0.00 0.00 2.92
2651 4733 5.339990 AGTTTGAAAGTTTGTCGTTGGATG 58.660 37.500 0.00 0.00 0.00 3.51
2652 4734 5.576447 AGTTTGAAAGTTTGTCGTTGGAT 57.424 34.783 0.00 0.00 0.00 3.41
2653 4735 5.379732 AAGTTTGAAAGTTTGTCGTTGGA 57.620 34.783 0.00 0.00 0.00 3.53
2654 4736 7.305190 CGAATAAGTTTGAAAGTTTGTCGTTGG 60.305 37.037 16.11 1.55 30.56 3.77
2655 4737 7.535408 CGAATAAGTTTGAAAGTTTGTCGTTG 58.465 34.615 16.11 0.00 30.56 4.10
2656 4738 6.195798 GCGAATAAGTTTGAAAGTTTGTCGTT 59.804 34.615 21.13 6.17 34.27 3.85
2657 4739 5.679792 GCGAATAAGTTTGAAAGTTTGTCGT 59.320 36.000 21.13 1.40 34.27 4.34
2658 4740 5.679355 TGCGAATAAGTTTGAAAGTTTGTCG 59.321 36.000 18.35 18.35 34.59 4.35
2659 4741 6.470877 TGTGCGAATAAGTTTGAAAGTTTGTC 59.529 34.615 3.03 1.51 0.00 3.18
2660 4742 6.252655 GTGTGCGAATAAGTTTGAAAGTTTGT 59.747 34.615 3.03 0.00 0.00 2.83
2661 4743 6.472163 AGTGTGCGAATAAGTTTGAAAGTTTG 59.528 34.615 3.03 0.00 0.00 2.93
2662 4744 6.560711 AGTGTGCGAATAAGTTTGAAAGTTT 58.439 32.000 3.03 0.00 0.00 2.66
2663 4745 6.131544 AGTGTGCGAATAAGTTTGAAAGTT 57.868 33.333 3.26 3.26 0.00 2.66
2664 4746 5.751243 AGTGTGCGAATAAGTTTGAAAGT 57.249 34.783 0.00 0.00 0.00 2.66
2667 4749 9.256477 CCTATATAGTGTGCGAATAAGTTTGAA 57.744 33.333 8.92 0.00 0.00 2.69
2668 4750 7.870954 CCCTATATAGTGTGCGAATAAGTTTGA 59.129 37.037 8.92 0.00 0.00 2.69
2669 4751 7.117812 CCCCTATATAGTGTGCGAATAAGTTTG 59.882 40.741 8.92 0.00 0.00 2.93
2670 4752 7.159372 CCCCTATATAGTGTGCGAATAAGTTT 58.841 38.462 8.92 0.00 0.00 2.66
2671 4753 6.269307 ACCCCTATATAGTGTGCGAATAAGTT 59.731 38.462 8.92 0.00 0.00 2.66
2672 4754 5.778750 ACCCCTATATAGTGTGCGAATAAGT 59.221 40.000 8.92 0.00 0.00 2.24
2673 4755 6.282199 ACCCCTATATAGTGTGCGAATAAG 57.718 41.667 8.92 0.00 0.00 1.73
2674 4756 7.966339 ATACCCCTATATAGTGTGCGAATAA 57.034 36.000 8.92 0.00 0.00 1.40
2675 4757 8.496916 TCTATACCCCTATATAGTGTGCGAATA 58.503 37.037 8.92 1.18 36.76 1.75
2676 4758 7.351952 TCTATACCCCTATATAGTGTGCGAAT 58.648 38.462 8.92 0.21 36.76 3.34
2677 4759 6.724351 TCTATACCCCTATATAGTGTGCGAA 58.276 40.000 8.92 0.00 36.76 4.70
2678 4760 6.317663 TCTATACCCCTATATAGTGTGCGA 57.682 41.667 8.92 2.59 36.76 5.10
2679 4761 8.865420 ATATCTATACCCCTATATAGTGTGCG 57.135 38.462 8.92 0.00 36.76 5.34
2690 4772 9.035890 GCATGCATGTATATATCTATACCCCTA 57.964 37.037 26.79 0.00 39.23 3.53
2691 4773 7.513781 TGCATGCATGTATATATCTATACCCCT 59.486 37.037 26.79 0.00 39.23 4.79
2692 4774 7.679783 TGCATGCATGTATATATCTATACCCC 58.320 38.462 26.79 5.42 39.23 4.95
2693 4775 9.159364 CATGCATGCATGTATATATCTATACCC 57.841 37.037 40.30 6.43 46.20 3.69
2712 4794 3.943381 AGTTGTCATACAGGACATGCATG 59.057 43.478 25.09 25.09 46.37 4.06
2844 4926 6.997239 ACTAGTGTACTGTCGATGTATTGA 57.003 37.500 0.00 0.00 0.00 2.57
2860 4942 6.430000 AGCGTTCCAAATATCAAAACTAGTGT 59.570 34.615 0.00 0.00 0.00 3.55
2887 4969 1.691434 CTATCTGACTCCAAGAGCCCC 59.309 57.143 0.00 0.00 32.04 5.80
2896 4978 8.169268 CGTTTGTAACAAAATCTATCTGACTCC 58.831 37.037 0.00 0.00 0.00 3.85
2899 4981 8.709646 ACTCGTTTGTAACAAAATCTATCTGAC 58.290 33.333 0.00 0.00 0.00 3.51
2924 5006 3.366396 TGACTCAGATCCCTTACTCCAC 58.634 50.000 0.00 0.00 0.00 4.02
2931 5013 4.599241 TCCTCTTTTTGACTCAGATCCCTT 59.401 41.667 0.00 0.00 0.00 3.95
2932 5014 4.171234 TCCTCTTTTTGACTCAGATCCCT 58.829 43.478 0.00 0.00 0.00 4.20
2984 5066 4.014406 TGCAAGATGAAAGTCTCATGCAT 58.986 39.130 0.00 0.00 45.23 3.96
2998 5080 2.422479 CACTTGGGAGTCATGCAAGATG 59.578 50.000 14.53 7.29 32.54 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.