Multiple sequence alignment - TraesCS5D01G312800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G312800 chr5D 100.000 6324 0 0 1 6324 408339915 408346238 0.000000e+00 11679.0
1 TraesCS5D01G312800 chr5D 93.642 346 20 2 5980 6324 525599564 525599220 3.380000e-142 516.0
2 TraesCS5D01G312800 chr5B 94.310 4183 201 14 763 4919 489842865 489847036 0.000000e+00 6372.0
3 TraesCS5D01G312800 chr5B 90.685 891 39 16 4918 5783 489847118 489847989 0.000000e+00 1146.0
4 TraesCS5D01G312800 chr5B 88.298 94 9 2 5887 5980 133894835 133894926 1.860000e-20 111.0
5 TraesCS5D01G312800 chr5A 94.922 2619 88 10 1 2609 514189031 514191614 0.000000e+00 4058.0
6 TraesCS5D01G312800 chr5A 89.447 1374 121 10 2664 4016 514191803 514193173 0.000000e+00 1712.0
7 TraesCS5D01G312800 chr5A 91.901 1210 66 12 4308 5503 514264356 514265547 0.000000e+00 1663.0
8 TraesCS5D01G312800 chr5A 93.911 854 38 3 3477 4318 514263482 514264333 0.000000e+00 1277.0
9 TraesCS5D01G312800 chr5A 78.967 1065 162 27 4033 5069 514193244 514194274 0.000000e+00 669.0
10 TraesCS5D01G312800 chr5A 95.028 181 7 2 5709 5889 514275943 514276121 3.730000e-72 283.0
11 TraesCS5D01G312800 chr5A 100.000 68 0 0 3441 3508 514261302 514261369 6.660000e-25 126.0
12 TraesCS5D01G312800 chr5A 97.297 37 1 0 5497 5533 514265604 514265568 5.290000e-06 63.9
13 TraesCS5D01G312800 chr3B 79.425 1113 186 18 2820 3894 17597801 17596694 0.000000e+00 747.0
14 TraesCS5D01G312800 chr3B 72.739 752 180 15 1118 1846 17602175 17601426 4.930000e-56 230.0
15 TraesCS5D01G312800 chr3A 76.570 1242 236 31 2811 4010 31928941 31930169 1.160000e-176 630.0
16 TraesCS5D01G312800 chr3A 91.209 91 7 1 5886 5975 499556310 499556220 8.610000e-24 122.0
17 TraesCS5D01G312800 chr7D 77.237 1028 195 18 2814 3817 603668725 603667713 3.310000e-157 566.0
18 TraesCS5D01G312800 chr6B 94.186 344 19 1 5982 6324 692012771 692012428 2.020000e-144 523.0
19 TraesCS5D01G312800 chr7B 93.913 345 20 1 5981 6324 597243480 597243824 2.610000e-143 520.0
20 TraesCS5D01G312800 chr6D 93.678 348 21 1 5978 6324 469591854 469591507 2.610000e-143 520.0
21 TraesCS5D01G312800 chr6D 91.765 85 7 0 5888 5972 462762824 462762740 1.110000e-22 119.0
22 TraesCS5D01G312800 chr4B 93.642 346 20 2 5980 6324 180943422 180943078 3.380000e-142 516.0
23 TraesCS5D01G312800 chr4B 90.110 91 8 1 5886 5975 525796057 525796147 4.010000e-22 117.0
24 TraesCS5D01G312800 chr1D 93.878 343 20 1 5983 6324 34586736 34587078 3.380000e-142 516.0
25 TraesCS5D01G312800 chr1D 93.605 344 21 1 5982 6324 124565319 124564976 4.370000e-141 512.0
26 TraesCS5D01G312800 chr4D 93.314 344 22 1 5980 6322 8678010 8678353 2.030000e-139 507.0
27 TraesCS5D01G312800 chr7A 85.843 445 52 11 5887 6324 679242294 679242734 4.470000e-126 462.0
28 TraesCS5D01G312800 chrUn 76.735 490 110 4 1331 1817 20586244 20586732 2.910000e-68 270.0
29 TraesCS5D01G312800 chrUn 91.358 81 7 0 5894 5974 313026529 313026449 1.860000e-20 111.0
30 TraesCS5D01G312800 chr3D 73.245 755 171 20 1118 1846 12243359 12242610 4.900000e-61 246.0
31 TraesCS5D01G312800 chr4A 90.110 91 7 2 5886 5975 577318733 577318644 4.010000e-22 117.0
32 TraesCS5D01G312800 chr2B 90.805 87 8 0 5886 5972 95449714 95449800 4.010000e-22 117.0
33 TraesCS5D01G312800 chr1B 88.542 96 8 3 5877 5972 62724854 62724946 5.180000e-21 113.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G312800 chr5D 408339915 408346238 6323 False 11679.000000 11679 100.000000 1 6324 1 chr5D.!!$F1 6323
1 TraesCS5D01G312800 chr5B 489842865 489847989 5124 False 3759.000000 6372 92.497500 763 5783 2 chr5B.!!$F2 5020
2 TraesCS5D01G312800 chr5A 514189031 514194274 5243 False 2146.333333 4058 87.778667 1 5069 3 chr5A.!!$F2 5068
3 TraesCS5D01G312800 chr5A 514261302 514265547 4245 False 1022.000000 1663 95.270667 3441 5503 3 chr5A.!!$F3 2062
4 TraesCS5D01G312800 chr3B 17596694 17602175 5481 True 488.500000 747 76.082000 1118 3894 2 chr3B.!!$R1 2776
5 TraesCS5D01G312800 chr3A 31928941 31930169 1228 False 630.000000 630 76.570000 2811 4010 1 chr3A.!!$F1 1199
6 TraesCS5D01G312800 chr7D 603667713 603668725 1012 True 566.000000 566 77.237000 2814 3817 1 chr7D.!!$R1 1003
7 TraesCS5D01G312800 chr3D 12242610 12243359 749 True 246.000000 246 73.245000 1118 1846 1 chr3D.!!$R1 728

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
801 812 0.308993 GCTGACACTTGGTGCAGAAC 59.691 55.000 18.56 5.69 38.75 3.01 F
1187 1198 1.135721 CAGGAGCGATGTCATCACTCA 59.864 52.381 25.10 0.00 39.59 3.41 F
2189 5452 1.068434 TGCCTGCCTGTAAAACAAAGC 59.932 47.619 0.00 0.00 0.00 3.51 F
3126 6534 0.472898 GGGGTTCCACTAGCCATACC 59.527 60.000 0.00 0.00 37.42 2.73 F
4364 10043 0.108585 GGTTCTTGCCAGTCTGACCA 59.891 55.000 3.76 0.00 0.00 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1860 1892 1.470098 CATTCAGGAAAGAAGGCACCG 59.530 52.381 0.00 0.0 0.00 4.94 R
3126 6534 0.798776 CAAAAGGCTGGCTACACTCG 59.201 55.000 3.41 0.0 0.00 4.18 R
4163 9809 2.124860 GGTGTACCCATCGGTGGC 60.125 66.667 9.99 0.0 44.40 5.01 R
4825 10516 0.034477 TTCCTCCCATTTCCTTCGCC 60.034 55.000 0.00 0.0 0.00 5.54 R
6201 12019 0.036875 GTCTTGGTTGGGACCTCAGG 59.963 60.000 0.00 0.0 46.66 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
78 79 5.888161 AGGGTTCCTGAATATGCAGTAAAAG 59.112 40.000 9.96 0.00 34.06 2.27
119 120 1.524548 GCAGCTTGCGTTCGTAAATC 58.475 50.000 0.00 0.00 31.71 2.17
354 362 4.676018 GTCTCGACTTGACTTGTCACTTAC 59.324 45.833 2.62 0.00 34.37 2.34
377 385 6.543736 ACAAAGAAAAACTTTCTCGAGACAC 58.456 36.000 16.36 0.00 45.66 3.67
422 432 4.758773 TCACAGCACCATATCAAGATGA 57.241 40.909 0.00 0.00 0.00 2.92
602 612 0.839946 ACAAGTCTGTGACAAGGGCT 59.160 50.000 0.46 0.00 34.60 5.19
618 628 4.806640 AGGGCTAATGTTGATTTTGGTG 57.193 40.909 0.00 0.00 0.00 4.17
783 794 2.622064 AACCTCCTCGTATGATTGGC 57.378 50.000 0.00 0.00 0.00 4.52
801 812 0.308993 GCTGACACTTGGTGCAGAAC 59.691 55.000 18.56 5.69 38.75 3.01
837 848 6.017605 CCAATCCACATTCTCTTCTTATTCCG 60.018 42.308 0.00 0.00 0.00 4.30
909 920 2.095059 GTGACATGCATGAACCAGTTCC 60.095 50.000 32.75 11.13 38.77 3.62
953 964 6.594159 CGTCACAAGGATAATCAAGTTTAGGT 59.406 38.462 0.00 0.00 0.00 3.08
1000 1011 5.180117 ACTCGAAGTTCATGAATTCCACTTG 59.820 40.000 12.12 6.02 0.00 3.16
1187 1198 1.135721 CAGGAGCGATGTCATCACTCA 59.864 52.381 25.10 0.00 39.59 3.41
1189 1200 2.035704 AGGAGCGATGTCATCACTCATC 59.964 50.000 25.10 13.36 39.59 2.92
1450 1467 2.321719 GGGCTTTTGGGTGGACTAAAA 58.678 47.619 0.00 0.00 0.00 1.52
1495 1512 5.654603 TTGCTAACAGGATCGAAGAACTA 57.345 39.130 0.00 0.00 43.58 2.24
1617 1637 1.170919 GCACTCTATACCGAGGCCGA 61.171 60.000 0.00 0.00 38.22 5.54
1641 1661 3.045601 CCTTGTAGGCATAGATTCCCG 57.954 52.381 0.00 0.00 0.00 5.14
1811 1843 5.335661 GCCTTTGTATCGGTGTCTCAAAATT 60.336 40.000 0.00 0.00 0.00 1.82
1860 1892 2.203549 CTCTCTGGAGTTTGGGGGCC 62.204 65.000 0.00 0.00 35.03 5.80
2147 5409 5.264712 CCGTTACTTCTCTGACTTATCGAC 58.735 45.833 0.00 0.00 0.00 4.20
2161 5423 1.276622 ATCGACCTACTTGGGCTTGT 58.723 50.000 0.00 0.00 43.44 3.16
2189 5452 1.068434 TGCCTGCCTGTAAAACAAAGC 59.932 47.619 0.00 0.00 0.00 3.51
2357 5620 8.755941 CAATGAGATAGGATTTGTTAGTACACG 58.244 37.037 0.00 0.00 32.98 4.49
2407 5671 2.104792 TGAGCACAGAAGGCAGTACTTT 59.895 45.455 0.00 0.00 0.00 2.66
3126 6534 0.472898 GGGGTTCCACTAGCCATACC 59.527 60.000 0.00 0.00 37.42 2.73
3412 6838 9.242477 GAGGAGATTGCAGAAAATTATTTTAGC 57.758 33.333 15.71 15.71 35.53 3.09
3541 9109 5.805486 GTCCACAGAAGAAAACTTTTTCACC 59.195 40.000 15.14 7.36 46.81 4.02
3556 9124 9.588096 AACTTTTTCACCATAACTAAGGAATCT 57.412 29.630 0.00 0.00 0.00 2.40
3682 9265 6.616577 AGTTAGGTCATTTAACTTTTGGGGA 58.383 36.000 0.00 0.00 37.95 4.81
3959 9548 2.715046 TGTGGCATCTCATTGTTCCTC 58.285 47.619 0.00 0.00 0.00 3.71
4163 9809 0.312416 CGACAGCCTTCGATCCCTAG 59.688 60.000 0.00 0.00 41.78 3.02
4242 9888 2.225963 GCCATCTTCATAGACTGCATGC 59.774 50.000 11.82 11.82 32.97 4.06
4250 9896 1.713597 TAGACTGCATGCACTGAACG 58.286 50.000 18.46 8.68 0.00 3.95
4364 10043 0.108585 GGTTCTTGCCAGTCTGACCA 59.891 55.000 3.76 0.00 0.00 4.02
4390 10069 3.510753 TGGTTCACCTTATACTGCGTGTA 59.489 43.478 0.00 0.00 36.82 2.90
4392 10071 4.565564 GGTTCACCTTATACTGCGTGTAAG 59.434 45.833 13.94 13.94 37.12 2.34
4395 10074 3.107642 CCTTATACTGCGTGTAAGGGG 57.892 52.381 23.63 10.38 46.52 4.79
4396 10075 2.480845 CTTATACTGCGTGTAAGGGGC 58.519 52.381 13.41 0.00 34.90 5.80
4397 10076 1.487300 TATACTGCGTGTAAGGGGCA 58.513 50.000 0.00 0.00 34.45 5.36
4399 10078 2.347490 CTGCGTGTAAGGGGCAGT 59.653 61.111 4.20 0.00 46.82 4.40
4400 10079 2.031919 TGCGTGTAAGGGGCAGTG 59.968 61.111 0.00 0.00 32.07 3.66
4401 10080 2.032071 GCGTGTAAGGGGCAGTGT 59.968 61.111 0.00 0.00 0.00 3.55
4402 10081 1.294138 GCGTGTAAGGGGCAGTGTA 59.706 57.895 0.00 0.00 0.00 2.90
4479 10170 6.183360 CCAAACCTCAAGAATCTTGTCTTTGT 60.183 38.462 20.91 10.23 35.63 2.83
4498 10189 0.253044 TGTATGAAGTGCCCTGCCTC 59.747 55.000 0.00 0.00 0.00 4.70
4531 10222 1.450531 GCGCTATGCCAAGGCTTCAT 61.451 55.000 12.96 1.32 42.51 2.57
4648 10339 3.194542 TGCATATTTACAAGTGGGCCAAC 59.805 43.478 8.40 0.26 0.00 3.77
4825 10516 9.630098 ATTGTAACTTTTTGATAGTGCAATCAG 57.370 29.630 0.00 0.00 37.20 2.90
4834 10525 0.036732 AGTGCAATCAGGCGAAGGAA 59.963 50.000 0.00 0.00 36.28 3.36
4846 10537 1.340114 GCGAAGGAAATGGGAGGAAGT 60.340 52.381 0.00 0.00 0.00 3.01
4907 10612 7.594758 TCTTTGTTTTTCTTTCTGTTGTGTGAG 59.405 33.333 0.00 0.00 0.00 3.51
4996 10788 0.454600 CCAGGAAGCATGTCACATGC 59.545 55.000 31.91 31.91 44.85 4.06
5103 10895 7.541098 GCAGGTGCTGTTCTTGTGTATCAAG 62.541 48.000 0.00 1.71 44.68 3.02
5151 10943 2.736531 CTGGGGCCAAGTGTTTGC 59.263 61.111 4.39 0.00 32.79 3.68
5190 10982 1.902938 AGGAGCAAAAGGAAGCTGAC 58.097 50.000 0.00 0.00 42.04 3.51
5191 10983 1.143684 AGGAGCAAAAGGAAGCTGACA 59.856 47.619 0.00 0.00 42.04 3.58
5372 11172 1.135286 GCAGCCCAAGAGGATTTTTCG 60.135 52.381 0.00 0.00 38.24 3.46
5447 11256 0.035739 TTAACACCCAGAACTCCGGC 59.964 55.000 0.00 0.00 0.00 6.13
5504 11313 7.212976 TGAGGAAGCAGAACATCTGTTATATC 58.787 38.462 8.97 3.40 45.94 1.63
5505 11314 6.529220 AGGAAGCAGAACATCTGTTATATCC 58.471 40.000 8.97 7.13 45.94 2.59
5527 11336 1.651240 CTCTCATGCCCAAACTGCCG 61.651 60.000 0.00 0.00 0.00 5.69
5575 11384 0.322456 TTCTCCGCTCAAATGGTGGG 60.322 55.000 0.00 0.00 35.30 4.61
5662 11471 1.059098 TCAGGGCTCGCAATATCCAT 58.941 50.000 0.00 0.00 0.00 3.41
5670 11482 0.514255 CGCAATATCCATCCACTGCG 59.486 55.000 0.00 0.00 45.38 5.18
5677 11489 2.683859 CCATCCACTGCGCACACTG 61.684 63.158 5.66 0.00 0.00 3.66
5678 11490 1.668793 CATCCACTGCGCACACTGA 60.669 57.895 5.66 0.60 0.00 3.41
5679 11491 1.022982 CATCCACTGCGCACACTGAT 61.023 55.000 5.66 3.37 0.00 2.90
5680 11492 0.742281 ATCCACTGCGCACACTGATC 60.742 55.000 5.66 0.00 0.00 2.92
5716 11528 2.269241 GCTCGTGGGAGGGAAAGG 59.731 66.667 0.00 0.00 40.80 3.11
5718 11530 2.609610 TCGTGGGAGGGAAAGGGG 60.610 66.667 0.00 0.00 0.00 4.79
5720 11532 2.534533 GTGGGAGGGAAAGGGGGT 60.535 66.667 0.00 0.00 0.00 4.95
5721 11533 2.534272 TGGGAGGGAAAGGGGGTG 60.534 66.667 0.00 0.00 0.00 4.61
5722 11534 3.347590 GGGAGGGAAAGGGGGTGG 61.348 72.222 0.00 0.00 0.00 4.61
5723 11535 3.347590 GGAGGGAAAGGGGGTGGG 61.348 72.222 0.00 0.00 0.00 4.61
5736 11554 4.035102 GTGGGGTGTGAGGGGAGC 62.035 72.222 0.00 0.00 0.00 4.70
5776 11594 3.380320 CAGTTTTGTCCCGAGGTTTTCTT 59.620 43.478 0.00 0.00 0.00 2.52
5784 11602 2.094762 CGAGGTTTTCTTCATCGGGT 57.905 50.000 0.00 0.00 0.00 5.28
5785 11603 2.423577 CGAGGTTTTCTTCATCGGGTT 58.576 47.619 0.00 0.00 0.00 4.11
5786 11604 2.159627 CGAGGTTTTCTTCATCGGGTTG 59.840 50.000 0.00 0.00 0.00 3.77
5787 11605 3.146847 GAGGTTTTCTTCATCGGGTTGT 58.853 45.455 0.00 0.00 0.00 3.32
5788 11606 2.884639 AGGTTTTCTTCATCGGGTTGTG 59.115 45.455 0.00 0.00 0.00 3.33
5789 11607 2.030274 GGTTTTCTTCATCGGGTTGTGG 60.030 50.000 0.00 0.00 0.00 4.17
5790 11608 2.882137 GTTTTCTTCATCGGGTTGTGGA 59.118 45.455 0.00 0.00 0.00 4.02
5791 11609 2.472695 TTCTTCATCGGGTTGTGGAG 57.527 50.000 0.00 0.00 0.00 3.86
5792 11610 0.613260 TCTTCATCGGGTTGTGGAGG 59.387 55.000 0.00 0.00 0.00 4.30
5793 11611 0.613260 CTTCATCGGGTTGTGGAGGA 59.387 55.000 0.00 0.00 0.00 3.71
5794 11612 1.210478 CTTCATCGGGTTGTGGAGGAT 59.790 52.381 0.00 0.00 0.00 3.24
5795 11613 2.168458 TCATCGGGTTGTGGAGGATA 57.832 50.000 0.00 0.00 0.00 2.59
5796 11614 2.039418 TCATCGGGTTGTGGAGGATAG 58.961 52.381 0.00 0.00 0.00 2.08
5797 11615 2.039418 CATCGGGTTGTGGAGGATAGA 58.961 52.381 0.00 0.00 0.00 1.98
5798 11616 2.241281 TCGGGTTGTGGAGGATAGAA 57.759 50.000 0.00 0.00 0.00 2.10
5799 11617 2.542550 TCGGGTTGTGGAGGATAGAAA 58.457 47.619 0.00 0.00 0.00 2.52
5800 11618 2.907696 TCGGGTTGTGGAGGATAGAAAA 59.092 45.455 0.00 0.00 0.00 2.29
5801 11619 3.328343 TCGGGTTGTGGAGGATAGAAAAA 59.672 43.478 0.00 0.00 0.00 1.94
5817 11635 2.182516 AAAAATTGGTGGGGTGGTGA 57.817 45.000 0.00 0.00 0.00 4.02
5818 11636 1.715785 AAAATTGGTGGGGTGGTGAG 58.284 50.000 0.00 0.00 0.00 3.51
5819 11637 0.178935 AAATTGGTGGGGTGGTGAGG 60.179 55.000 0.00 0.00 0.00 3.86
5820 11638 1.368268 AATTGGTGGGGTGGTGAGGT 61.368 55.000 0.00 0.00 0.00 3.85
5821 11639 2.080336 ATTGGTGGGGTGGTGAGGTG 62.080 60.000 0.00 0.00 0.00 4.00
5822 11640 3.966543 GGTGGGGTGGTGAGGTGG 61.967 72.222 0.00 0.00 0.00 4.61
5823 11641 3.966543 GTGGGGTGGTGAGGTGGG 61.967 72.222 0.00 0.00 0.00 4.61
5824 11642 4.194497 TGGGGTGGTGAGGTGGGA 62.194 66.667 0.00 0.00 0.00 4.37
5825 11643 3.330720 GGGGTGGTGAGGTGGGAG 61.331 72.222 0.00 0.00 0.00 4.30
5826 11644 2.529389 GGGTGGTGAGGTGGGAGT 60.529 66.667 0.00 0.00 0.00 3.85
5827 11645 2.750350 GGTGGTGAGGTGGGAGTG 59.250 66.667 0.00 0.00 0.00 3.51
5828 11646 2.750350 GTGGTGAGGTGGGAGTGG 59.250 66.667 0.00 0.00 0.00 4.00
5829 11647 2.529136 TGGTGAGGTGGGAGTGGG 60.529 66.667 0.00 0.00 0.00 4.61
5830 11648 2.203938 GGTGAGGTGGGAGTGGGA 60.204 66.667 0.00 0.00 0.00 4.37
5831 11649 2.593956 GGTGAGGTGGGAGTGGGAC 61.594 68.421 0.00 0.00 0.00 4.46
5832 11650 2.603473 TGAGGTGGGAGTGGGACG 60.603 66.667 0.00 0.00 0.00 4.79
5833 11651 2.283676 GAGGTGGGAGTGGGACGA 60.284 66.667 0.00 0.00 0.00 4.20
5834 11652 2.283966 AGGTGGGAGTGGGACGAG 60.284 66.667 0.00 0.00 0.00 4.18
5835 11653 3.391382 GGTGGGAGTGGGACGAGG 61.391 72.222 0.00 0.00 0.00 4.63
5836 11654 3.391382 GTGGGAGTGGGACGAGGG 61.391 72.222 0.00 0.00 0.00 4.30
5840 11658 3.319198 GAGTGGGACGAGGGCCAA 61.319 66.667 6.18 0.00 0.00 4.52
5841 11659 3.607370 GAGTGGGACGAGGGCCAAC 62.607 68.421 6.18 0.00 0.00 3.77
5842 11660 3.948719 GTGGGACGAGGGCCAACA 61.949 66.667 6.18 0.00 29.33 3.33
5843 11661 2.933287 TGGGACGAGGGCCAACAT 60.933 61.111 6.18 0.00 0.00 2.71
5844 11662 1.613928 TGGGACGAGGGCCAACATA 60.614 57.895 6.18 0.00 0.00 2.29
5845 11663 1.202099 TGGGACGAGGGCCAACATAA 61.202 55.000 6.18 0.00 0.00 1.90
5846 11664 0.182775 GGGACGAGGGCCAACATAAT 59.817 55.000 6.18 0.00 0.00 1.28
5847 11665 1.594331 GGACGAGGGCCAACATAATC 58.406 55.000 6.18 0.00 0.00 1.75
5848 11666 1.141053 GGACGAGGGCCAACATAATCT 59.859 52.381 6.18 0.00 0.00 2.40
5849 11667 2.367567 GGACGAGGGCCAACATAATCTA 59.632 50.000 6.18 0.00 0.00 1.98
5850 11668 3.181458 GGACGAGGGCCAACATAATCTAA 60.181 47.826 6.18 0.00 0.00 2.10
5851 11669 4.058817 GACGAGGGCCAACATAATCTAAG 58.941 47.826 6.18 0.00 0.00 2.18
5852 11670 3.454812 ACGAGGGCCAACATAATCTAAGT 59.545 43.478 6.18 0.00 0.00 2.24
5853 11671 4.058817 CGAGGGCCAACATAATCTAAGTC 58.941 47.826 6.18 0.00 0.00 3.01
5854 11672 4.202264 CGAGGGCCAACATAATCTAAGTCT 60.202 45.833 6.18 0.00 0.00 3.24
5855 11673 5.010719 CGAGGGCCAACATAATCTAAGTCTA 59.989 44.000 6.18 0.00 0.00 2.59
5856 11674 6.462487 CGAGGGCCAACATAATCTAAGTCTAA 60.462 42.308 6.18 0.00 0.00 2.10
5857 11675 7.208064 AGGGCCAACATAATCTAAGTCTAAA 57.792 36.000 6.18 0.00 0.00 1.85
5858 11676 7.054751 AGGGCCAACATAATCTAAGTCTAAAC 58.945 38.462 6.18 0.00 0.00 2.01
5859 11677 6.018180 GGGCCAACATAATCTAAGTCTAAACG 60.018 42.308 4.39 0.00 0.00 3.60
5860 11678 6.759827 GGCCAACATAATCTAAGTCTAAACGA 59.240 38.462 0.00 0.00 0.00 3.85
5861 11679 7.254353 GGCCAACATAATCTAAGTCTAAACGAC 60.254 40.741 0.00 0.00 43.17 4.34
5870 11688 2.259505 GTCTAAACGACGTAGCAGCT 57.740 50.000 0.00 0.00 32.04 4.24
5871 11689 2.175566 GTCTAAACGACGTAGCAGCTC 58.824 52.381 0.00 0.00 32.04 4.09
5872 11690 1.131883 TCTAAACGACGTAGCAGCTCC 59.868 52.381 0.00 0.00 0.00 4.70
5873 11691 0.171903 TAAACGACGTAGCAGCTCCC 59.828 55.000 0.00 0.00 0.00 4.30
5874 11692 2.502692 AAACGACGTAGCAGCTCCCC 62.503 60.000 0.00 0.00 0.00 4.81
5875 11693 3.141488 CGACGTAGCAGCTCCCCT 61.141 66.667 0.00 0.00 0.00 4.79
5876 11694 2.711922 CGACGTAGCAGCTCCCCTT 61.712 63.158 0.00 0.00 0.00 3.95
5877 11695 1.597461 GACGTAGCAGCTCCCCTTT 59.403 57.895 0.00 0.00 0.00 3.11
5878 11696 0.822164 GACGTAGCAGCTCCCCTTTA 59.178 55.000 0.00 0.00 0.00 1.85
5879 11697 1.206371 GACGTAGCAGCTCCCCTTTAA 59.794 52.381 0.00 0.00 0.00 1.52
5880 11698 1.626825 ACGTAGCAGCTCCCCTTTAAA 59.373 47.619 0.00 0.00 0.00 1.52
5881 11699 2.007608 CGTAGCAGCTCCCCTTTAAAC 58.992 52.381 0.00 0.00 0.00 2.01
5882 11700 2.354805 CGTAGCAGCTCCCCTTTAAACT 60.355 50.000 0.00 0.00 0.00 2.66
5883 11701 2.980246 AGCAGCTCCCCTTTAAACTT 57.020 45.000 0.00 0.00 0.00 2.66
5884 11702 3.244887 AGCAGCTCCCCTTTAAACTTT 57.755 42.857 0.00 0.00 0.00 2.66
5885 11703 4.382386 AGCAGCTCCCCTTTAAACTTTA 57.618 40.909 0.00 0.00 0.00 1.85
5886 11704 4.736473 AGCAGCTCCCCTTTAAACTTTAA 58.264 39.130 0.00 0.00 0.00 1.52
5887 11705 5.333581 AGCAGCTCCCCTTTAAACTTTAAT 58.666 37.500 0.00 0.00 0.00 1.40
5888 11706 6.490492 AGCAGCTCCCCTTTAAACTTTAATA 58.510 36.000 0.00 0.00 0.00 0.98
5889 11707 6.377429 AGCAGCTCCCCTTTAAACTTTAATAC 59.623 38.462 0.00 0.00 0.00 1.89
5890 11708 6.377429 GCAGCTCCCCTTTAAACTTTAATACT 59.623 38.462 0.00 0.00 0.00 2.12
5891 11709 7.415318 GCAGCTCCCCTTTAAACTTTAATACTC 60.415 40.741 0.00 0.00 0.00 2.59
5892 11710 7.829706 CAGCTCCCCTTTAAACTTTAATACTCT 59.170 37.037 0.00 0.00 0.00 3.24
5893 11711 8.047911 AGCTCCCCTTTAAACTTTAATACTCTC 58.952 37.037 0.00 0.00 0.00 3.20
5894 11712 8.047911 GCTCCCCTTTAAACTTTAATACTCTCT 58.952 37.037 0.00 0.00 0.00 3.10
5895 11713 9.602568 CTCCCCTTTAAACTTTAATACTCTCTC 57.397 37.037 0.00 0.00 0.00 3.20
5896 11714 8.546322 TCCCCTTTAAACTTTAATACTCTCTCC 58.454 37.037 0.00 0.00 0.00 3.71
5897 11715 7.494952 CCCCTTTAAACTTTAATACTCTCTCCG 59.505 40.741 0.00 0.00 0.00 4.63
5898 11716 8.039538 CCCTTTAAACTTTAATACTCTCTCCGT 58.960 37.037 0.00 0.00 0.00 4.69
5899 11717 9.085250 CCTTTAAACTTTAATACTCTCTCCGTC 57.915 37.037 0.00 0.00 0.00 4.79
5900 11718 8.992835 TTTAAACTTTAATACTCTCTCCGTCC 57.007 34.615 0.00 0.00 0.00 4.79
5901 11719 5.595257 AACTTTAATACTCTCTCCGTCCC 57.405 43.478 0.00 0.00 0.00 4.46
5902 11720 4.607239 ACTTTAATACTCTCTCCGTCCCA 58.393 43.478 0.00 0.00 0.00 4.37
5903 11721 5.209659 ACTTTAATACTCTCTCCGTCCCAT 58.790 41.667 0.00 0.00 0.00 4.00
5904 11722 6.371278 ACTTTAATACTCTCTCCGTCCCATA 58.629 40.000 0.00 0.00 0.00 2.74
5905 11723 6.837568 ACTTTAATACTCTCTCCGTCCCATAA 59.162 38.462 0.00 0.00 0.00 1.90
5906 11724 7.509659 ACTTTAATACTCTCTCCGTCCCATAAT 59.490 37.037 0.00 0.00 0.00 1.28
5907 11725 8.945195 TTTAATACTCTCTCCGTCCCATAATA 57.055 34.615 0.00 0.00 0.00 0.98
5908 11726 9.543231 TTTAATACTCTCTCCGTCCCATAATAT 57.457 33.333 0.00 0.00 0.00 1.28
5911 11729 9.543231 AATACTCTCTCCGTCCCATAATATAAA 57.457 33.333 0.00 0.00 0.00 1.40
5912 11730 7.850935 ACTCTCTCCGTCCCATAATATAAAA 57.149 36.000 0.00 0.00 0.00 1.52
5913 11731 7.897864 ACTCTCTCCGTCCCATAATATAAAAG 58.102 38.462 0.00 0.00 0.00 2.27
5914 11732 6.698380 TCTCTCCGTCCCATAATATAAAAGC 58.302 40.000 0.00 0.00 0.00 3.51
5915 11733 6.269077 TCTCTCCGTCCCATAATATAAAAGCA 59.731 38.462 0.00 0.00 0.00 3.91
5916 11734 7.016153 TCTCCGTCCCATAATATAAAAGCAT 57.984 36.000 0.00 0.00 0.00 3.79
5917 11735 7.458397 TCTCCGTCCCATAATATAAAAGCATT 58.542 34.615 0.00 0.00 0.00 3.56
5918 11736 7.942341 TCTCCGTCCCATAATATAAAAGCATTT 59.058 33.333 0.00 0.00 42.41 2.32
5933 11751 6.854496 AAAGCATTTTCGACACTACACTAA 57.146 33.333 0.00 0.00 31.62 2.24
5934 11752 7.435068 AAAGCATTTTCGACACTACACTAAT 57.565 32.000 0.00 0.00 31.62 1.73
5935 11753 8.542497 AAAGCATTTTCGACACTACACTAATA 57.458 30.769 0.00 0.00 31.62 0.98
5936 11754 8.718102 AAGCATTTTCGACACTACACTAATAT 57.282 30.769 0.00 0.00 0.00 1.28
5937 11755 8.718102 AGCATTTTCGACACTACACTAATATT 57.282 30.769 0.00 0.00 0.00 1.28
5938 11756 9.811995 AGCATTTTCGACACTACACTAATATTA 57.188 29.630 0.00 0.00 0.00 0.98
5945 11763 9.624697 TCGACACTACACTAATATTAAAAACGT 57.375 29.630 0.00 0.00 0.00 3.99
5968 11786 7.001099 GTTCTTATATTATGGAACGGAGGGA 57.999 40.000 7.88 0.00 0.00 4.20
5969 11787 6.852420 TCTTATATTATGGAACGGAGGGAG 57.148 41.667 0.00 0.00 0.00 4.30
5970 11788 6.320518 TCTTATATTATGGAACGGAGGGAGT 58.679 40.000 0.00 0.00 0.00 3.85
5971 11789 7.472741 TCTTATATTATGGAACGGAGGGAGTA 58.527 38.462 0.00 0.00 0.00 2.59
5972 11790 7.614583 TCTTATATTATGGAACGGAGGGAGTAG 59.385 40.741 0.00 0.00 0.00 2.57
5973 11791 3.393426 TTATGGAACGGAGGGAGTAGT 57.607 47.619 0.00 0.00 0.00 2.73
5974 11792 4.524802 TTATGGAACGGAGGGAGTAGTA 57.475 45.455 0.00 0.00 0.00 1.82
5975 11793 2.431954 TGGAACGGAGGGAGTAGTAG 57.568 55.000 0.00 0.00 0.00 2.57
5976 11794 1.918262 TGGAACGGAGGGAGTAGTAGA 59.082 52.381 0.00 0.00 0.00 2.59
5977 11795 2.309755 TGGAACGGAGGGAGTAGTAGAA 59.690 50.000 0.00 0.00 0.00 2.10
5978 11796 3.245371 TGGAACGGAGGGAGTAGTAGAAA 60.245 47.826 0.00 0.00 0.00 2.52
5979 11797 3.959449 GGAACGGAGGGAGTAGTAGAAAT 59.041 47.826 0.00 0.00 0.00 2.17
5980 11798 4.405036 GGAACGGAGGGAGTAGTAGAAATT 59.595 45.833 0.00 0.00 0.00 1.82
5981 11799 5.105023 GGAACGGAGGGAGTAGTAGAAATTT 60.105 44.000 0.00 0.00 0.00 1.82
5982 11800 6.370186 AACGGAGGGAGTAGTAGAAATTTT 57.630 37.500 0.00 0.00 0.00 1.82
5983 11801 6.370186 ACGGAGGGAGTAGTAGAAATTTTT 57.630 37.500 0.00 0.00 0.00 1.94
6012 11830 2.444895 GAGGATGACTCCCGGCCT 60.445 66.667 0.00 0.00 43.21 5.19
6013 11831 2.444895 AGGATGACTCCCGGCCTC 60.445 66.667 0.00 0.00 43.21 4.70
6014 11832 2.444895 GGATGACTCCCGGCCTCT 60.445 66.667 0.00 0.00 35.28 3.69
6015 11833 2.801631 GGATGACTCCCGGCCTCTG 61.802 68.421 0.00 0.00 35.28 3.35
6016 11834 3.453070 GATGACTCCCGGCCTCTGC 62.453 68.421 0.00 0.00 0.00 4.26
6018 11836 3.474570 GACTCCCGGCCTCTGCAT 61.475 66.667 0.00 0.00 40.13 3.96
6019 11837 3.453070 GACTCCCGGCCTCTGCATC 62.453 68.421 0.00 0.00 40.13 3.91
6020 11838 3.160047 CTCCCGGCCTCTGCATCT 61.160 66.667 0.00 0.00 40.13 2.90
6021 11839 3.457625 CTCCCGGCCTCTGCATCTG 62.458 68.421 0.00 0.00 40.13 2.90
6022 11840 4.559063 CCCGGCCTCTGCATCTGG 62.559 72.222 0.00 0.00 40.13 3.86
6023 11841 3.473647 CCGGCCTCTGCATCTGGA 61.474 66.667 0.00 0.00 40.13 3.86
6024 11842 2.202987 CGGCCTCTGCATCTGGAC 60.203 66.667 0.00 0.35 40.13 4.02
6025 11843 2.202987 GGCCTCTGCATCTGGACG 60.203 66.667 0.00 0.00 40.13 4.79
6026 11844 2.725312 GGCCTCTGCATCTGGACGA 61.725 63.158 0.00 0.00 40.13 4.20
6027 11845 1.445095 GCCTCTGCATCTGGACGAT 59.555 57.895 0.00 0.00 37.47 3.73
6034 11852 2.697819 CATCTGGACGATGCATGCA 58.302 52.632 25.04 25.04 42.75 3.96
6035 11853 0.586802 CATCTGGACGATGCATGCAG 59.413 55.000 26.69 15.79 42.75 4.41
6036 11854 1.164662 ATCTGGACGATGCATGCAGC 61.165 55.000 25.69 25.69 45.96 5.25
6037 11855 2.825387 TGGACGATGCATGCAGCC 60.825 61.111 28.76 23.21 44.83 4.85
6038 11856 2.825387 GGACGATGCATGCAGCCA 60.825 61.111 28.76 3.84 44.83 4.75
6039 11857 2.406401 GACGATGCATGCAGCCAC 59.594 61.111 28.76 18.86 44.83 5.01
6040 11858 2.045634 ACGATGCATGCAGCCACT 60.046 55.556 28.76 10.64 44.83 4.00
6041 11859 1.651240 GACGATGCATGCAGCCACTT 61.651 55.000 28.76 9.83 44.83 3.16
6042 11860 1.246056 ACGATGCATGCAGCCACTTT 61.246 50.000 28.76 9.02 44.83 2.66
6043 11861 0.734309 CGATGCATGCAGCCACTTTA 59.266 50.000 28.76 0.09 44.83 1.85
6044 11862 1.335810 CGATGCATGCAGCCACTTTAT 59.664 47.619 28.76 7.39 44.83 1.40
6045 11863 2.223641 CGATGCATGCAGCCACTTTATT 60.224 45.455 28.76 6.59 44.83 1.40
6046 11864 3.003585 CGATGCATGCAGCCACTTTATTA 59.996 43.478 28.76 0.00 44.83 0.98
6047 11865 4.497842 CGATGCATGCAGCCACTTTATTAA 60.498 41.667 28.76 0.00 44.83 1.40
6048 11866 5.535333 GATGCATGCAGCCACTTTATTAAT 58.465 37.500 25.21 2.11 44.83 1.40
6049 11867 5.341872 TGCATGCAGCCACTTTATTAATT 57.658 34.783 18.46 0.00 44.83 1.40
6050 11868 6.462552 TGCATGCAGCCACTTTATTAATTA 57.537 33.333 18.46 0.00 44.83 1.40
6051 11869 7.053316 TGCATGCAGCCACTTTATTAATTAT 57.947 32.000 18.46 0.00 44.83 1.28
6052 11870 7.499292 TGCATGCAGCCACTTTATTAATTATT 58.501 30.769 18.46 0.00 44.83 1.40
6053 11871 7.652909 TGCATGCAGCCACTTTATTAATTATTC 59.347 33.333 18.46 0.00 44.83 1.75
6054 11872 7.869429 GCATGCAGCCACTTTATTAATTATTCT 59.131 33.333 14.21 0.00 37.23 2.40
6055 11873 9.403110 CATGCAGCCACTTTATTAATTATTCTC 57.597 33.333 0.00 0.00 0.00 2.87
6056 11874 8.518430 TGCAGCCACTTTATTAATTATTCTCA 57.482 30.769 0.00 0.00 0.00 3.27
6057 11875 8.405531 TGCAGCCACTTTATTAATTATTCTCAC 58.594 33.333 0.00 0.00 0.00 3.51
6058 11876 8.405531 GCAGCCACTTTATTAATTATTCTCACA 58.594 33.333 0.00 0.00 0.00 3.58
6072 11890 9.520515 AATTATTCTCACATGTCCTTACAAAGT 57.479 29.630 0.00 0.00 39.58 2.66
6073 11891 8.547967 TTATTCTCACATGTCCTTACAAAGTC 57.452 34.615 0.00 0.00 39.58 3.01
6074 11892 5.545063 TCTCACATGTCCTTACAAAGTCA 57.455 39.130 0.00 0.00 39.58 3.41
6075 11893 6.114187 TCTCACATGTCCTTACAAAGTCAT 57.886 37.500 0.00 0.00 39.58 3.06
6076 11894 7.239763 TCTCACATGTCCTTACAAAGTCATA 57.760 36.000 0.00 0.00 39.58 2.15
6077 11895 7.097192 TCTCACATGTCCTTACAAAGTCATAC 58.903 38.462 0.00 0.00 39.58 2.39
6078 11896 6.764379 TCACATGTCCTTACAAAGTCATACA 58.236 36.000 0.00 0.00 39.58 2.29
6079 11897 7.220740 TCACATGTCCTTACAAAGTCATACAA 58.779 34.615 0.00 0.00 39.58 2.41
6080 11898 7.172532 TCACATGTCCTTACAAAGTCATACAAC 59.827 37.037 0.00 0.00 39.58 3.32
6081 11899 6.995686 ACATGTCCTTACAAAGTCATACAACA 59.004 34.615 0.00 0.00 39.58 3.33
6082 11900 7.500892 ACATGTCCTTACAAAGTCATACAACAA 59.499 33.333 0.00 0.00 39.58 2.83
6083 11901 8.514594 CATGTCCTTACAAAGTCATACAACAAT 58.485 33.333 0.00 0.00 39.58 2.71
6084 11902 9.733556 ATGTCCTTACAAAGTCATACAACAATA 57.266 29.630 0.00 0.00 39.58 1.90
6085 11903 9.562408 TGTCCTTACAAAGTCATACAACAATAA 57.438 29.630 0.00 0.00 30.91 1.40
6094 11912 9.908152 AAAGTCATACAACAATAAACTAAAGCC 57.092 29.630 0.00 0.00 0.00 4.35
6095 11913 8.630054 AGTCATACAACAATAAACTAAAGCCA 57.370 30.769 0.00 0.00 0.00 4.75
6096 11914 8.512138 AGTCATACAACAATAAACTAAAGCCAC 58.488 33.333 0.00 0.00 0.00 5.01
6097 11915 7.753580 GTCATACAACAATAAACTAAAGCCACC 59.246 37.037 0.00 0.00 0.00 4.61
6098 11916 5.116069 ACAACAATAAACTAAAGCCACCG 57.884 39.130 0.00 0.00 0.00 4.94
6099 11917 4.581409 ACAACAATAAACTAAAGCCACCGT 59.419 37.500 0.00 0.00 0.00 4.83
6100 11918 5.151389 CAACAATAAACTAAAGCCACCGTC 58.849 41.667 0.00 0.00 0.00 4.79
6101 11919 4.648651 ACAATAAACTAAAGCCACCGTCT 58.351 39.130 0.00 0.00 0.00 4.18
6102 11920 5.797051 ACAATAAACTAAAGCCACCGTCTA 58.203 37.500 0.00 0.00 0.00 2.59
6103 11921 6.232692 ACAATAAACTAAAGCCACCGTCTAA 58.767 36.000 0.00 0.00 0.00 2.10
6104 11922 6.370718 ACAATAAACTAAAGCCACCGTCTAAG 59.629 38.462 0.00 0.00 0.00 2.18
6105 11923 2.381725 ACTAAAGCCACCGTCTAAGC 57.618 50.000 0.00 0.00 0.00 3.09
6106 11924 1.621814 ACTAAAGCCACCGTCTAAGCA 59.378 47.619 0.00 0.00 0.00 3.91
6107 11925 2.038033 ACTAAAGCCACCGTCTAAGCAA 59.962 45.455 0.00 0.00 0.00 3.91
6108 11926 1.235724 AAAGCCACCGTCTAAGCAAC 58.764 50.000 0.00 0.00 0.00 4.17
6109 11927 0.107831 AAGCCACCGTCTAAGCAACA 59.892 50.000 0.00 0.00 0.00 3.33
6110 11928 0.107831 AGCCACCGTCTAAGCAACAA 59.892 50.000 0.00 0.00 0.00 2.83
6111 11929 0.237498 GCCACCGTCTAAGCAACAAC 59.763 55.000 0.00 0.00 0.00 3.32
6112 11930 1.878953 CCACCGTCTAAGCAACAACT 58.121 50.000 0.00 0.00 0.00 3.16
6113 11931 1.531149 CCACCGTCTAAGCAACAACTG 59.469 52.381 0.00 0.00 0.00 3.16
6114 11932 2.210116 CACCGTCTAAGCAACAACTGT 58.790 47.619 0.00 0.00 0.00 3.55
6115 11933 2.221055 CACCGTCTAAGCAACAACTGTC 59.779 50.000 0.00 0.00 0.00 3.51
6116 11934 1.455786 CCGTCTAAGCAACAACTGTCG 59.544 52.381 0.00 0.00 0.00 4.35
6117 11935 1.136611 CGTCTAAGCAACAACTGTCGC 60.137 52.381 0.00 0.00 0.00 5.19
6118 11936 2.135933 GTCTAAGCAACAACTGTCGCT 58.864 47.619 0.00 0.00 35.90 4.93
6119 11937 3.314553 GTCTAAGCAACAACTGTCGCTA 58.685 45.455 0.00 0.00 33.45 4.26
6120 11938 3.121445 GTCTAAGCAACAACTGTCGCTAC 59.879 47.826 0.00 0.00 33.45 3.58
6121 11939 1.948104 AAGCAACAACTGTCGCTACA 58.052 45.000 0.00 0.00 33.45 2.74
6122 11940 1.217882 AGCAACAACTGTCGCTACAC 58.782 50.000 0.00 0.00 31.60 2.90
6123 11941 0.234884 GCAACAACTGTCGCTACACC 59.765 55.000 0.00 0.00 0.00 4.16
6124 11942 1.865865 CAACAACTGTCGCTACACCT 58.134 50.000 0.00 0.00 0.00 4.00
6125 11943 2.864882 GCAACAACTGTCGCTACACCTA 60.865 50.000 0.00 0.00 0.00 3.08
6126 11944 3.585862 CAACAACTGTCGCTACACCTAT 58.414 45.455 0.00 0.00 0.00 2.57
6127 11945 3.505464 ACAACTGTCGCTACACCTATC 57.495 47.619 0.00 0.00 0.00 2.08
6128 11946 2.165845 ACAACTGTCGCTACACCTATCC 59.834 50.000 0.00 0.00 0.00 2.59
6129 11947 2.139323 ACTGTCGCTACACCTATCCA 57.861 50.000 0.00 0.00 0.00 3.41
6130 11948 2.453521 ACTGTCGCTACACCTATCCAA 58.546 47.619 0.00 0.00 0.00 3.53
6131 11949 3.031736 ACTGTCGCTACACCTATCCAAT 58.968 45.455 0.00 0.00 0.00 3.16
6132 11950 3.451178 ACTGTCGCTACACCTATCCAATT 59.549 43.478 0.00 0.00 0.00 2.32
6133 11951 4.647853 ACTGTCGCTACACCTATCCAATTA 59.352 41.667 0.00 0.00 0.00 1.40
6134 11952 5.128171 ACTGTCGCTACACCTATCCAATTAA 59.872 40.000 0.00 0.00 0.00 1.40
6135 11953 6.169557 TGTCGCTACACCTATCCAATTAAT 57.830 37.500 0.00 0.00 0.00 1.40
6136 11954 5.989168 TGTCGCTACACCTATCCAATTAATG 59.011 40.000 0.00 0.00 0.00 1.90
6137 11955 6.183360 TGTCGCTACACCTATCCAATTAATGA 60.183 38.462 0.00 0.00 0.00 2.57
6138 11956 6.704493 GTCGCTACACCTATCCAATTAATGAA 59.296 38.462 0.00 0.00 0.00 2.57
6139 11957 6.929049 TCGCTACACCTATCCAATTAATGAAG 59.071 38.462 0.00 0.00 0.00 3.02
6140 11958 6.147821 CGCTACACCTATCCAATTAATGAAGG 59.852 42.308 0.00 0.00 32.55 3.46
6141 11959 6.431234 GCTACACCTATCCAATTAATGAAGGG 59.569 42.308 0.00 0.00 31.31 3.95
6142 11960 5.705400 ACACCTATCCAATTAATGAAGGGG 58.295 41.667 0.00 0.00 34.57 4.79
6143 11961 5.195756 ACACCTATCCAATTAATGAAGGGGT 59.804 40.000 4.65 4.65 35.98 4.95
6144 11962 5.536161 CACCTATCCAATTAATGAAGGGGTG 59.464 44.000 11.08 11.08 33.66 4.61
6145 11963 4.524328 CCTATCCAATTAATGAAGGGGTGC 59.476 45.833 0.00 0.00 0.00 5.01
6146 11964 3.756082 TCCAATTAATGAAGGGGTGCT 57.244 42.857 0.00 0.00 0.00 4.40
6147 11965 3.364549 TCCAATTAATGAAGGGGTGCTG 58.635 45.455 0.00 0.00 0.00 4.41
6148 11966 3.011144 TCCAATTAATGAAGGGGTGCTGA 59.989 43.478 0.00 0.00 0.00 4.26
6149 11967 3.962718 CCAATTAATGAAGGGGTGCTGAT 59.037 43.478 0.00 0.00 0.00 2.90
6150 11968 5.103728 TCCAATTAATGAAGGGGTGCTGATA 60.104 40.000 0.00 0.00 0.00 2.15
6151 11969 5.242393 CCAATTAATGAAGGGGTGCTGATAG 59.758 44.000 0.00 0.00 0.00 2.08
6152 11970 5.653255 ATTAATGAAGGGGTGCTGATAGT 57.347 39.130 0.00 0.00 0.00 2.12
6153 11971 3.567478 AATGAAGGGGTGCTGATAGTC 57.433 47.619 0.00 0.00 0.00 2.59
6154 11972 2.254152 TGAAGGGGTGCTGATAGTCT 57.746 50.000 0.00 0.00 0.00 3.24
6155 11973 1.833630 TGAAGGGGTGCTGATAGTCTG 59.166 52.381 0.00 0.00 0.00 3.51
6156 11974 1.139853 GAAGGGGTGCTGATAGTCTGG 59.860 57.143 0.00 0.00 0.00 3.86
6157 11975 0.692419 AGGGGTGCTGATAGTCTGGG 60.692 60.000 0.00 0.00 0.00 4.45
6158 11976 1.147153 GGGTGCTGATAGTCTGGGC 59.853 63.158 0.00 0.00 0.00 5.36
6159 11977 1.147153 GGTGCTGATAGTCTGGGCC 59.853 63.158 0.00 0.00 0.00 5.80
6160 11978 1.341156 GGTGCTGATAGTCTGGGCCT 61.341 60.000 4.53 0.00 0.00 5.19
6161 11979 1.414158 GTGCTGATAGTCTGGGCCTA 58.586 55.000 4.53 0.00 0.00 3.93
6162 11980 1.762957 GTGCTGATAGTCTGGGCCTAA 59.237 52.381 4.53 0.00 0.00 2.69
6163 11981 2.370189 GTGCTGATAGTCTGGGCCTAAT 59.630 50.000 4.53 0.00 0.00 1.73
6164 11982 3.578716 GTGCTGATAGTCTGGGCCTAATA 59.421 47.826 4.53 0.00 0.00 0.98
6165 11983 3.578716 TGCTGATAGTCTGGGCCTAATAC 59.421 47.826 4.53 0.00 0.00 1.89
6166 11984 3.055747 GCTGATAGTCTGGGCCTAATACC 60.056 52.174 4.53 0.00 0.00 2.73
6167 11985 4.160329 CTGATAGTCTGGGCCTAATACCA 58.840 47.826 4.53 0.00 35.05 3.25
6168 11986 4.562767 TGATAGTCTGGGCCTAATACCAA 58.437 43.478 4.53 0.00 36.09 3.67
6169 11987 4.972568 TGATAGTCTGGGCCTAATACCAAA 59.027 41.667 4.53 0.00 36.09 3.28
6170 11988 5.610982 TGATAGTCTGGGCCTAATACCAAAT 59.389 40.000 4.53 0.00 36.09 2.32
6171 11989 6.790461 TGATAGTCTGGGCCTAATACCAAATA 59.210 38.462 4.53 0.00 36.09 1.40
6172 11990 5.568620 AGTCTGGGCCTAATACCAAATAG 57.431 43.478 4.53 0.00 36.09 1.73
6173 11991 5.224441 AGTCTGGGCCTAATACCAAATAGA 58.776 41.667 4.53 0.00 36.09 1.98
6174 11992 5.071923 AGTCTGGGCCTAATACCAAATAGAC 59.928 44.000 4.53 4.55 36.09 2.59
6175 11993 4.972568 TCTGGGCCTAATACCAAATAGACA 59.027 41.667 4.53 0.00 36.09 3.41
6176 11994 5.610982 TCTGGGCCTAATACCAAATAGACAT 59.389 40.000 4.53 0.00 36.09 3.06
6177 11995 5.876357 TGGGCCTAATACCAAATAGACATC 58.124 41.667 4.53 0.00 32.89 3.06
6178 11996 4.935808 GGGCCTAATACCAAATAGACATCG 59.064 45.833 0.84 0.00 0.00 3.84
6179 11997 4.392138 GGCCTAATACCAAATAGACATCGC 59.608 45.833 0.00 0.00 0.00 4.58
6180 11998 4.994852 GCCTAATACCAAATAGACATCGCA 59.005 41.667 0.00 0.00 0.00 5.10
6181 11999 5.120830 GCCTAATACCAAATAGACATCGCAG 59.879 44.000 0.00 0.00 0.00 5.18
6182 12000 5.120830 CCTAATACCAAATAGACATCGCAGC 59.879 44.000 0.00 0.00 0.00 5.25
6183 12001 1.668419 ACCAAATAGACATCGCAGCC 58.332 50.000 0.00 0.00 0.00 4.85
6184 12002 1.065491 ACCAAATAGACATCGCAGCCA 60.065 47.619 0.00 0.00 0.00 4.75
6185 12003 1.600957 CCAAATAGACATCGCAGCCAG 59.399 52.381 0.00 0.00 0.00 4.85
6186 12004 2.554142 CAAATAGACATCGCAGCCAGA 58.446 47.619 0.00 0.00 0.00 3.86
6187 12005 2.231215 AATAGACATCGCAGCCAGAC 57.769 50.000 0.00 0.00 0.00 3.51
6188 12006 0.390860 ATAGACATCGCAGCCAGACC 59.609 55.000 0.00 0.00 0.00 3.85
6189 12007 0.684479 TAGACATCGCAGCCAGACCT 60.684 55.000 0.00 0.00 0.00 3.85
6190 12008 0.684479 AGACATCGCAGCCAGACCTA 60.684 55.000 0.00 0.00 0.00 3.08
6191 12009 0.175760 GACATCGCAGCCAGACCTAA 59.824 55.000 0.00 0.00 0.00 2.69
6192 12010 0.108138 ACATCGCAGCCAGACCTAAC 60.108 55.000 0.00 0.00 0.00 2.34
6193 12011 0.108186 CATCGCAGCCAGACCTAACA 60.108 55.000 0.00 0.00 0.00 2.41
6194 12012 0.833287 ATCGCAGCCAGACCTAACAT 59.167 50.000 0.00 0.00 0.00 2.71
6195 12013 0.175760 TCGCAGCCAGACCTAACATC 59.824 55.000 0.00 0.00 0.00 3.06
6196 12014 0.176680 CGCAGCCAGACCTAACATCT 59.823 55.000 0.00 0.00 0.00 2.90
6197 12015 1.409064 CGCAGCCAGACCTAACATCTA 59.591 52.381 0.00 0.00 0.00 1.98
6198 12016 2.159099 CGCAGCCAGACCTAACATCTAA 60.159 50.000 0.00 0.00 0.00 2.10
6199 12017 3.462021 GCAGCCAGACCTAACATCTAAG 58.538 50.000 0.00 0.00 0.00 2.18
6200 12018 3.133003 GCAGCCAGACCTAACATCTAAGA 59.867 47.826 0.00 0.00 0.00 2.10
6201 12019 4.688021 CAGCCAGACCTAACATCTAAGAC 58.312 47.826 0.00 0.00 0.00 3.01
6202 12020 3.707102 AGCCAGACCTAACATCTAAGACC 59.293 47.826 0.00 0.00 0.00 3.85
6203 12021 3.707102 GCCAGACCTAACATCTAAGACCT 59.293 47.826 0.00 0.00 0.00 3.85
6204 12022 4.442192 GCCAGACCTAACATCTAAGACCTG 60.442 50.000 0.00 0.00 0.00 4.00
6205 12023 4.956700 CCAGACCTAACATCTAAGACCTGA 59.043 45.833 0.00 0.00 0.00 3.86
6206 12024 5.068460 CCAGACCTAACATCTAAGACCTGAG 59.932 48.000 0.00 0.00 0.00 3.35
6207 12025 5.068460 CAGACCTAACATCTAAGACCTGAGG 59.932 48.000 0.00 0.00 0.00 3.86
6208 12026 4.949121 ACCTAACATCTAAGACCTGAGGT 58.051 43.478 2.41 2.41 39.44 3.85
6223 12041 2.671963 GGTCCCAACCAAGACGCC 60.672 66.667 0.00 0.00 45.68 5.68
6224 12042 2.430367 GTCCCAACCAAGACGCCT 59.570 61.111 0.00 0.00 0.00 5.52
6225 12043 1.966451 GTCCCAACCAAGACGCCTG 60.966 63.158 0.00 0.00 0.00 4.85
6226 12044 3.365265 CCCAACCAAGACGCCTGC 61.365 66.667 0.00 0.00 0.00 4.85
6227 12045 3.365265 CCAACCAAGACGCCTGCC 61.365 66.667 0.00 0.00 0.00 4.85
6228 12046 3.726517 CAACCAAGACGCCTGCCG 61.727 66.667 0.00 0.00 44.21 5.69
6232 12050 4.077184 CAAGACGCCTGCCGGGTA 62.077 66.667 2.18 0.00 42.52 3.69
6233 12051 3.081409 AAGACGCCTGCCGGGTAT 61.081 61.111 2.18 0.00 42.52 2.73
6234 12052 3.385749 AAGACGCCTGCCGGGTATG 62.386 63.158 2.18 0.00 42.52 2.39
6246 12064 4.438346 GGTATGCGCACCCACTAG 57.562 61.111 14.90 0.00 31.91 2.57
6247 12065 1.520666 GGTATGCGCACCCACTAGT 59.479 57.895 14.90 0.00 31.91 2.57
6248 12066 0.529992 GGTATGCGCACCCACTAGTC 60.530 60.000 14.90 0.00 31.91 2.59
6249 12067 0.529992 GTATGCGCACCCACTAGTCC 60.530 60.000 14.90 0.00 0.00 3.85
6250 12068 0.973496 TATGCGCACCCACTAGTCCA 60.973 55.000 14.90 0.00 0.00 4.02
6251 12069 2.125512 GCGCACCCACTAGTCCAG 60.126 66.667 0.30 0.00 0.00 3.86
6252 12070 2.125512 CGCACCCACTAGTCCAGC 60.126 66.667 0.00 0.00 0.00 4.85
6253 12071 2.125512 GCACCCACTAGTCCAGCG 60.126 66.667 0.00 0.00 0.00 5.18
6254 12072 2.943978 GCACCCACTAGTCCAGCGT 61.944 63.158 0.00 0.00 0.00 5.07
6255 12073 1.079819 CACCCACTAGTCCAGCGTG 60.080 63.158 0.00 0.00 0.00 5.34
6256 12074 2.125512 CCCACTAGTCCAGCGTGC 60.126 66.667 0.00 0.00 0.00 5.34
6257 12075 2.650116 CCCACTAGTCCAGCGTGCT 61.650 63.158 0.00 0.00 0.00 4.40
6258 12076 1.153745 CCACTAGTCCAGCGTGCTC 60.154 63.158 0.00 0.00 0.00 4.26
6259 12077 1.153745 CACTAGTCCAGCGTGCTCC 60.154 63.158 0.00 0.00 0.00 4.70
6260 12078 1.304547 ACTAGTCCAGCGTGCTCCT 60.305 57.895 0.00 0.00 0.00 3.69
6261 12079 1.316706 ACTAGTCCAGCGTGCTCCTC 61.317 60.000 0.00 0.00 0.00 3.71
6262 12080 1.304134 TAGTCCAGCGTGCTCCTCA 60.304 57.895 0.00 0.00 0.00 3.86
6263 12081 0.898326 TAGTCCAGCGTGCTCCTCAA 60.898 55.000 0.00 0.00 0.00 3.02
6264 12082 2.029844 GTCCAGCGTGCTCCTCAAC 61.030 63.158 0.00 0.00 0.00 3.18
6265 12083 2.743928 CCAGCGTGCTCCTCAACC 60.744 66.667 0.00 0.00 0.00 3.77
6266 12084 2.031012 CAGCGTGCTCCTCAACCA 59.969 61.111 0.00 0.00 0.00 3.67
6267 12085 2.031516 CAGCGTGCTCCTCAACCAG 61.032 63.158 0.00 0.00 0.00 4.00
6268 12086 2.743928 GCGTGCTCCTCAACCAGG 60.744 66.667 0.00 0.00 45.15 4.45
6284 12102 4.910585 GGACGCCTGCCGGGTATG 62.911 72.222 2.18 0.00 42.52 2.39
6285 12103 3.845259 GACGCCTGCCGGGTATGA 61.845 66.667 2.18 0.00 42.52 2.15
6286 12104 3.792053 GACGCCTGCCGGGTATGAG 62.792 68.421 2.18 0.00 42.52 2.90
6287 12105 4.609018 CGCCTGCCGGGTATGAGG 62.609 72.222 2.18 0.00 37.43 3.86
6310 12128 3.225798 GCAGCCACTTGCCACCAA 61.226 61.111 0.00 0.00 42.71 3.67
6311 12129 2.576832 GCAGCCACTTGCCACCAAT 61.577 57.895 0.00 0.00 42.71 3.16
6312 12130 1.588082 CAGCCACTTGCCACCAATC 59.412 57.895 0.00 0.00 42.71 2.67
6313 12131 1.607467 AGCCACTTGCCACCAATCC 60.607 57.895 0.00 0.00 42.71 3.01
6314 12132 1.907807 GCCACTTGCCACCAATCCA 60.908 57.895 0.00 0.00 0.00 3.41
6315 12133 1.259840 GCCACTTGCCACCAATCCAT 61.260 55.000 0.00 0.00 0.00 3.41
6316 12134 0.819582 CCACTTGCCACCAATCCATC 59.180 55.000 0.00 0.00 0.00 3.51
6317 12135 1.617804 CCACTTGCCACCAATCCATCT 60.618 52.381 0.00 0.00 0.00 2.90
6318 12136 2.173519 CACTTGCCACCAATCCATCTT 58.826 47.619 0.00 0.00 0.00 2.40
6319 12137 2.165030 CACTTGCCACCAATCCATCTTC 59.835 50.000 0.00 0.00 0.00 2.87
6320 12138 2.225091 ACTTGCCACCAATCCATCTTCA 60.225 45.455 0.00 0.00 0.00 3.02
6321 12139 2.133281 TGCCACCAATCCATCTTCAG 57.867 50.000 0.00 0.00 0.00 3.02
6322 12140 1.634973 TGCCACCAATCCATCTTCAGA 59.365 47.619 0.00 0.00 0.00 3.27
6323 12141 2.295885 GCCACCAATCCATCTTCAGAG 58.704 52.381 0.00 0.00 0.00 3.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 3.068307 ACCTATAAGCGCACTCTTAGTGG 59.932 47.826 11.47 8.20 46.01 4.00
78 79 4.266265 GCAAGCTTTCAAGTTTCAAGTCAC 59.734 41.667 0.00 0.00 0.00 3.67
105 106 5.097529 AGATTAGACGATTTACGAACGCAA 58.902 37.500 0.00 0.00 45.77 4.85
119 120 6.073112 GGCTAGTTAGGACACTAGATTAGACG 60.073 46.154 11.30 0.00 46.54 4.18
241 249 0.258194 ACCACTACTAGACGAGGGGG 59.742 60.000 14.25 8.81 40.93 5.40
354 362 6.684555 CAGTGTCTCGAGAAAGTTTTTCTTTG 59.315 38.462 18.55 0.00 45.15 2.77
411 421 8.427276 TCTTCTGTAGTTGCATCATCTTGATAT 58.573 33.333 0.00 0.00 34.28 1.63
422 432 4.040952 AGTTGACCTCTTCTGTAGTTGCAT 59.959 41.667 0.00 0.00 0.00 3.96
496 506 5.163478 GGGAATGAAGAAACCCATCAATCAG 60.163 44.000 0.00 0.00 41.72 2.90
602 612 4.155709 TCCTGGCACCAAAATCAACATTA 58.844 39.130 0.00 0.00 0.00 1.90
618 628 2.843701 CATAATGGTCTCACTCCTGGC 58.156 52.381 0.00 0.00 0.00 4.85
783 794 0.583438 CGTTCTGCACCAAGTGTCAG 59.417 55.000 10.81 10.81 38.25 3.51
837 848 4.870991 GCCTGACTACCAGTATTGTTTCTC 59.129 45.833 0.00 0.00 41.33 2.87
953 964 2.172851 GGTCAACCATGTGAACGGTA 57.827 50.000 0.00 0.00 33.17 4.02
1495 1512 1.688735 GCTTCCAAGACCTTTGCCTTT 59.311 47.619 0.00 0.00 0.00 3.11
1637 1657 2.418197 CGATAAGCTTGTCCTTTCGGGA 60.418 50.000 16.55 0.00 42.77 5.14
1638 1658 1.933853 CGATAAGCTTGTCCTTTCGGG 59.066 52.381 16.55 0.00 0.00 5.14
1641 1661 4.436183 GCAACTCGATAAGCTTGTCCTTTC 60.436 45.833 16.55 0.00 0.00 2.62
1811 1843 5.875224 TGACAATACCTTGACAAGATTGGA 58.125 37.500 23.30 12.98 34.79 3.53
1860 1892 1.470098 CATTCAGGAAAGAAGGCACCG 59.530 52.381 0.00 0.00 0.00 4.94
2147 5409 4.871933 AAAATGAACAAGCCCAAGTAGG 57.128 40.909 0.00 0.00 37.03 3.18
2161 5423 4.679373 TTTACAGGCAGGCAAAAATGAA 57.321 36.364 0.00 0.00 0.00 2.57
2189 5452 2.224113 GCATGCCATGGATTTAAGTGGG 60.224 50.000 18.40 0.00 32.35 4.61
2263 5526 9.797642 TTAGTCTAGTTGGATACGTTATATGGA 57.202 33.333 0.00 0.00 42.51 3.41
2357 5620 6.428159 TCTCAGACCAGACTAAAATTTGCTTC 59.572 38.462 0.00 0.00 0.00 3.86
2407 5671 4.015084 CGAAGTTTAGACCTCCACTCCTA 58.985 47.826 0.00 0.00 0.00 2.94
2463 5727 6.058833 TGCATACAAGTTTGAGACCTAAACA 58.941 36.000 0.00 0.00 39.78 2.83
2464 5728 6.554334 TGCATACAAGTTTGAGACCTAAAC 57.446 37.500 0.00 0.00 38.09 2.01
3086 6494 8.262601 ACCCCTTGACATTTCTTTAGAATTTT 57.737 30.769 0.00 0.00 33.54 1.82
3126 6534 0.798776 CAAAAGGCTGGCTACACTCG 59.201 55.000 3.41 0.00 0.00 4.18
3205 6613 5.012046 AGCAGGGTTTCCTTCCAATTTTAAG 59.988 40.000 0.00 0.00 42.67 1.85
3209 6617 2.976440 AGCAGGGTTTCCTTCCAATTT 58.024 42.857 0.00 0.00 42.67 1.82
3412 6838 6.854892 GGATCATGTTTTTATTGATGAGCTCG 59.145 38.462 9.64 0.00 32.92 5.03
3556 9124 5.437060 GAGCCTTTCATGGTAATTACAGGA 58.563 41.667 17.16 8.20 0.00 3.86
3682 9265 2.578021 AGAAGGCATACATTGACCAGGT 59.422 45.455 0.00 0.00 31.49 4.00
3782 9371 3.427863 GTCAGTAGGAACAAACTGCGTAC 59.572 47.826 0.00 0.00 42.07 3.67
3959 9548 7.593875 TCTCACCAAACAAAGTCAAATTTTG 57.406 32.000 2.59 2.59 40.48 2.44
4163 9809 2.124860 GGTGTACCCATCGGTGGC 60.125 66.667 9.99 0.00 44.40 5.01
4242 9888 1.376037 GAGAAGGGGCCGTTCAGTG 60.376 63.158 33.30 0.00 0.00 3.66
4250 9896 2.597903 GACCATGGAGAAGGGGCC 59.402 66.667 21.47 0.00 0.00 5.80
4364 10043 2.677037 GCAGTATAAGGTGAACCAGCGT 60.677 50.000 1.62 0.00 38.89 5.07
4390 10069 0.919710 GATCCCTTACACTGCCCCTT 59.080 55.000 0.00 0.00 0.00 3.95
4392 10071 0.846693 ATGATCCCTTACACTGCCCC 59.153 55.000 0.00 0.00 0.00 5.80
4393 10072 1.972872 CATGATCCCTTACACTGCCC 58.027 55.000 0.00 0.00 0.00 5.36
4394 10073 1.133976 AGCATGATCCCTTACACTGCC 60.134 52.381 0.00 0.00 0.00 4.85
4395 10074 2.216898 GAGCATGATCCCTTACACTGC 58.783 52.381 0.00 0.00 0.00 4.40
4396 10075 2.843701 GGAGCATGATCCCTTACACTG 58.156 52.381 19.66 0.00 32.79 3.66
4479 10170 0.253044 GAGGCAGGGCACTTCATACA 59.747 55.000 0.00 0.00 0.00 2.29
4567 10258 0.249120 TGAGTACACCATCGGCTTGG 59.751 55.000 0.00 2.14 42.82 3.61
4648 10339 4.566426 ATCAAAACTCTCCCTGAAGAGG 57.434 45.455 5.94 0.00 45.87 3.69
4753 10444 0.537143 TGTTGACCGCCTTGCTGATT 60.537 50.000 0.00 0.00 0.00 2.57
4766 10457 2.969300 TTCCCCGGGTGCTTGTTGAC 62.969 60.000 21.85 0.00 0.00 3.18
4825 10516 0.034477 TTCCTCCCATTTCCTTCGCC 60.034 55.000 0.00 0.00 0.00 5.54
4834 10525 3.385115 CCTACCAGTACTTCCTCCCATT 58.615 50.000 0.00 0.00 0.00 3.16
4846 10537 5.249780 TGGAAATTTTCTGCCTACCAGTA 57.750 39.130 8.93 0.00 42.38 2.74
4907 10612 8.947940 CATTTGCTTAAGTAATATGTTTCGCTC 58.052 33.333 6.84 0.00 0.00 5.03
4996 10788 7.167968 CACAAAACCATGAACATGTACTGAAAG 59.832 37.037 12.74 0.00 37.11 2.62
5103 10895 1.195448 CTCACATCGCAACCAGTTGAC 59.805 52.381 14.56 5.04 42.93 3.18
5104 10896 1.511850 CTCACATCGCAACCAGTTGA 58.488 50.000 14.56 0.00 42.93 3.18
5105 10897 0.110056 GCTCACATCGCAACCAGTTG 60.110 55.000 6.15 6.15 43.14 3.16
5106 10898 0.534877 TGCTCACATCGCAACCAGTT 60.535 50.000 0.00 0.00 33.87 3.16
5107 10899 0.952497 CTGCTCACATCGCAACCAGT 60.952 55.000 0.00 0.00 36.88 4.00
5139 10931 1.280066 CAACACTGCAAACACTTGGC 58.720 50.000 0.00 0.00 32.76 4.52
5151 10943 0.534877 TGTACTGCAGCCCAACACTG 60.535 55.000 15.27 0.00 38.22 3.66
5190 10982 2.762535 AACTCCCTCGTAACACCATG 57.237 50.000 0.00 0.00 0.00 3.66
5191 10983 4.224370 ACATAAACTCCCTCGTAACACCAT 59.776 41.667 0.00 0.00 0.00 3.55
5316 11108 6.547880 ACACAACCCAATGTTTATTAGTGTCA 59.452 34.615 0.00 0.00 34.00 3.58
5372 11172 8.738645 AAGGAGAACCATGTATTGATAAGAAC 57.261 34.615 0.00 0.00 38.94 3.01
5427 11235 1.543871 GCCGGAGTTCTGGGTGTTAAA 60.544 52.381 5.05 0.00 42.72 1.52
5447 11256 4.654262 TCCCATACTAACTAAAGCCTCCAG 59.346 45.833 0.00 0.00 0.00 3.86
5504 11313 0.622665 AGTTTGGGCATGAGAGAGGG 59.377 55.000 0.00 0.00 0.00 4.30
5505 11314 1.747709 CAGTTTGGGCATGAGAGAGG 58.252 55.000 0.00 0.00 0.00 3.69
5527 11336 9.705290 ATTACCAATGTTGTTCCTTTTATTGAC 57.295 29.630 0.00 0.00 0.00 3.18
5609 11418 2.928334 CTGGAGATGAACAATGGAGGG 58.072 52.381 0.00 0.00 0.00 4.30
5618 11427 1.522580 GGAGCCGCTGGAGATGAAC 60.523 63.158 0.00 0.00 0.00 3.18
5620 11429 3.531207 CGGAGCCGCTGGAGATGA 61.531 66.667 0.00 0.00 0.00 2.92
5621 11430 4.598894 CCGGAGCCGCTGGAGATG 62.599 72.222 0.00 0.00 46.81 2.90
5640 11449 0.946221 GATATTGCGAGCCCTGACGG 60.946 60.000 0.00 0.00 0.00 4.79
5651 11460 0.514255 CGCAGTGGATGGATATTGCG 59.486 55.000 2.21 2.21 46.41 4.85
5662 11471 1.374631 GATCAGTGTGCGCAGTGGA 60.375 57.895 29.66 18.78 44.15 4.02
5670 11482 1.135046 CCATCGATCGATCAGTGTGC 58.865 55.000 27.20 0.00 31.62 4.57
5677 11489 0.814457 CCTCCCTCCATCGATCGATC 59.186 60.000 27.20 15.68 31.62 3.69
5678 11490 1.254284 GCCTCCCTCCATCGATCGAT 61.254 60.000 24.60 24.60 34.81 3.59
5679 11491 1.903890 GCCTCCCTCCATCGATCGA 60.904 63.158 21.86 21.86 0.00 3.59
5680 11492 2.653702 GCCTCCCTCCATCGATCG 59.346 66.667 9.36 9.36 0.00 3.69
5718 11530 3.330720 CTCCCCTCACACCCCACC 61.331 72.222 0.00 0.00 0.00 4.61
5722 11534 3.775654 CTCGCTCCCCTCACACCC 61.776 72.222 0.00 0.00 0.00 4.61
5723 11535 1.668101 CTACTCGCTCCCCTCACACC 61.668 65.000 0.00 0.00 0.00 4.16
5736 11554 3.067106 ACTGTGCAATGAAACCTACTCG 58.933 45.455 0.00 0.00 0.00 4.18
5776 11594 2.039418 CTATCCTCCACAACCCGATGA 58.961 52.381 0.00 0.00 0.00 2.92
5798 11616 2.046292 CTCACCACCCCACCAATTTTT 58.954 47.619 0.00 0.00 0.00 1.94
5799 11617 1.715785 CTCACCACCCCACCAATTTT 58.284 50.000 0.00 0.00 0.00 1.82
5800 11618 0.178935 CCTCACCACCCCACCAATTT 60.179 55.000 0.00 0.00 0.00 1.82
5801 11619 1.368268 ACCTCACCACCCCACCAATT 61.368 55.000 0.00 0.00 0.00 2.32
5802 11620 1.778383 ACCTCACCACCCCACCAAT 60.778 57.895 0.00 0.00 0.00 3.16
5803 11621 2.369015 ACCTCACCACCCCACCAA 60.369 61.111 0.00 0.00 0.00 3.67
5804 11622 3.174987 CACCTCACCACCCCACCA 61.175 66.667 0.00 0.00 0.00 4.17
5805 11623 3.966543 CCACCTCACCACCCCACC 61.967 72.222 0.00 0.00 0.00 4.61
5806 11624 3.966543 CCCACCTCACCACCCCAC 61.967 72.222 0.00 0.00 0.00 4.61
5807 11625 4.194497 TCCCACCTCACCACCCCA 62.194 66.667 0.00 0.00 0.00 4.96
5808 11626 3.330720 CTCCCACCTCACCACCCC 61.331 72.222 0.00 0.00 0.00 4.95
5809 11627 2.529389 ACTCCCACCTCACCACCC 60.529 66.667 0.00 0.00 0.00 4.61
5810 11628 2.750350 CACTCCCACCTCACCACC 59.250 66.667 0.00 0.00 0.00 4.61
5811 11629 2.750350 CCACTCCCACCTCACCAC 59.250 66.667 0.00 0.00 0.00 4.16
5812 11630 2.529136 CCCACTCCCACCTCACCA 60.529 66.667 0.00 0.00 0.00 4.17
5813 11631 2.203938 TCCCACTCCCACCTCACC 60.204 66.667 0.00 0.00 0.00 4.02
5814 11632 2.943978 CGTCCCACTCCCACCTCAC 61.944 68.421 0.00 0.00 0.00 3.51
5815 11633 2.603473 CGTCCCACTCCCACCTCA 60.603 66.667 0.00 0.00 0.00 3.86
5816 11634 2.283676 TCGTCCCACTCCCACCTC 60.284 66.667 0.00 0.00 0.00 3.85
5817 11635 2.283966 CTCGTCCCACTCCCACCT 60.284 66.667 0.00 0.00 0.00 4.00
5818 11636 3.391382 CCTCGTCCCACTCCCACC 61.391 72.222 0.00 0.00 0.00 4.61
5819 11637 3.391382 CCCTCGTCCCACTCCCAC 61.391 72.222 0.00 0.00 0.00 4.61
5823 11641 3.319198 TTGGCCCTCGTCCCACTC 61.319 66.667 0.00 0.00 0.00 3.51
5824 11642 3.637273 GTTGGCCCTCGTCCCACT 61.637 66.667 0.00 0.00 0.00 4.00
5825 11643 1.906105 TATGTTGGCCCTCGTCCCAC 61.906 60.000 0.00 0.00 0.00 4.61
5826 11644 1.202099 TTATGTTGGCCCTCGTCCCA 61.202 55.000 0.00 0.00 0.00 4.37
5827 11645 0.182775 ATTATGTTGGCCCTCGTCCC 59.817 55.000 0.00 0.00 0.00 4.46
5828 11646 1.141053 AGATTATGTTGGCCCTCGTCC 59.859 52.381 0.00 0.00 0.00 4.79
5829 11647 2.622064 AGATTATGTTGGCCCTCGTC 57.378 50.000 0.00 0.00 0.00 4.20
5830 11648 3.454812 ACTTAGATTATGTTGGCCCTCGT 59.545 43.478 0.00 0.00 0.00 4.18
5831 11649 4.058817 GACTTAGATTATGTTGGCCCTCG 58.941 47.826 0.00 0.00 0.00 4.63
5832 11650 5.297569 AGACTTAGATTATGTTGGCCCTC 57.702 43.478 0.00 0.00 0.00 4.30
5833 11651 6.824958 TTAGACTTAGATTATGTTGGCCCT 57.175 37.500 0.00 0.00 0.00 5.19
5834 11652 6.018180 CGTTTAGACTTAGATTATGTTGGCCC 60.018 42.308 0.00 0.00 0.00 5.80
5835 11653 6.759827 TCGTTTAGACTTAGATTATGTTGGCC 59.240 38.462 0.00 0.00 0.00 5.36
5836 11654 7.619328 GTCGTTTAGACTTAGATTATGTTGGC 58.381 38.462 0.00 0.00 46.13 4.52
5851 11669 2.175566 GAGCTGCTACGTCGTTTAGAC 58.824 52.381 1.78 0.00 46.16 2.59
5852 11670 1.131883 GGAGCTGCTACGTCGTTTAGA 59.868 52.381 1.78 0.00 0.00 2.10
5853 11671 1.546834 GGAGCTGCTACGTCGTTTAG 58.453 55.000 1.78 0.00 0.00 1.85
5854 11672 0.171903 GGGAGCTGCTACGTCGTTTA 59.828 55.000 1.78 0.00 0.00 2.01
5855 11673 1.080025 GGGAGCTGCTACGTCGTTT 60.080 57.895 1.78 0.00 0.00 3.60
5856 11674 2.572284 GGGAGCTGCTACGTCGTT 59.428 61.111 1.78 0.00 0.00 3.85
5857 11675 3.450115 GGGGAGCTGCTACGTCGT 61.450 66.667 5.66 2.21 0.00 4.34
5858 11676 2.227089 AAAGGGGAGCTGCTACGTCG 62.227 60.000 5.66 0.00 0.00 5.12
5859 11677 0.822164 TAAAGGGGAGCTGCTACGTC 59.178 55.000 5.66 0.61 0.00 4.34
5860 11678 1.272807 TTAAAGGGGAGCTGCTACGT 58.727 50.000 5.66 0.00 0.00 3.57
5861 11679 2.007608 GTTTAAAGGGGAGCTGCTACG 58.992 52.381 5.66 0.00 0.00 3.51
5862 11680 3.351794 AGTTTAAAGGGGAGCTGCTAC 57.648 47.619 2.38 2.38 0.00 3.58
5863 11681 4.382386 AAAGTTTAAAGGGGAGCTGCTA 57.618 40.909 0.15 0.00 0.00 3.49
5864 11682 2.980246 AAGTTTAAAGGGGAGCTGCT 57.020 45.000 0.00 0.00 0.00 4.24
5865 11683 5.661056 ATTAAAGTTTAAAGGGGAGCTGC 57.339 39.130 11.92 0.00 0.00 5.25
5866 11684 7.829706 AGAGTATTAAAGTTTAAAGGGGAGCTG 59.170 37.037 11.92 0.00 0.00 4.24
5867 11685 7.929959 AGAGTATTAAAGTTTAAAGGGGAGCT 58.070 34.615 11.92 0.00 0.00 4.09
5868 11686 8.047911 AGAGAGTATTAAAGTTTAAAGGGGAGC 58.952 37.037 11.92 1.04 0.00 4.70
5869 11687 9.602568 GAGAGAGTATTAAAGTTTAAAGGGGAG 57.397 37.037 11.92 0.00 0.00 4.30
5870 11688 8.546322 GGAGAGAGTATTAAAGTTTAAAGGGGA 58.454 37.037 11.92 0.00 0.00 4.81
5871 11689 7.494952 CGGAGAGAGTATTAAAGTTTAAAGGGG 59.505 40.741 11.92 0.00 0.00 4.79
5872 11690 8.039538 ACGGAGAGAGTATTAAAGTTTAAAGGG 58.960 37.037 11.92 0.00 0.00 3.95
5873 11691 8.999220 ACGGAGAGAGTATTAAAGTTTAAAGG 57.001 34.615 11.92 0.00 0.00 3.11
5874 11692 9.085250 GGACGGAGAGAGTATTAAAGTTTAAAG 57.915 37.037 11.92 0.00 0.00 1.85
5875 11693 8.037166 GGGACGGAGAGAGTATTAAAGTTTAAA 58.963 37.037 11.92 0.17 0.00 1.52
5876 11694 7.178983 TGGGACGGAGAGAGTATTAAAGTTTAA 59.821 37.037 10.39 10.39 0.00 1.52
5877 11695 6.664816 TGGGACGGAGAGAGTATTAAAGTTTA 59.335 38.462 0.00 0.00 0.00 2.01
5878 11696 5.482878 TGGGACGGAGAGAGTATTAAAGTTT 59.517 40.000 0.00 0.00 0.00 2.66
5879 11697 5.021458 TGGGACGGAGAGAGTATTAAAGTT 58.979 41.667 0.00 0.00 0.00 2.66
5880 11698 4.607239 TGGGACGGAGAGAGTATTAAAGT 58.393 43.478 0.00 0.00 0.00 2.66
5881 11699 5.793030 ATGGGACGGAGAGAGTATTAAAG 57.207 43.478 0.00 0.00 0.00 1.85
5882 11700 7.850935 ATTATGGGACGGAGAGAGTATTAAA 57.149 36.000 0.00 0.00 0.00 1.52
5885 11703 9.543231 TTTATATTATGGGACGGAGAGAGTATT 57.457 33.333 0.00 0.00 0.00 1.89
5886 11704 9.543231 TTTTATATTATGGGACGGAGAGAGTAT 57.457 33.333 0.00 0.00 0.00 2.12
5887 11705 8.945195 TTTTATATTATGGGACGGAGAGAGTA 57.055 34.615 0.00 0.00 0.00 2.59
5888 11706 7.525692 GCTTTTATATTATGGGACGGAGAGAGT 60.526 40.741 0.00 0.00 0.00 3.24
5889 11707 6.814146 GCTTTTATATTATGGGACGGAGAGAG 59.186 42.308 0.00 0.00 0.00 3.20
5890 11708 6.269077 TGCTTTTATATTATGGGACGGAGAGA 59.731 38.462 0.00 0.00 0.00 3.10
5891 11709 6.464222 TGCTTTTATATTATGGGACGGAGAG 58.536 40.000 0.00 0.00 0.00 3.20
5892 11710 6.428083 TGCTTTTATATTATGGGACGGAGA 57.572 37.500 0.00 0.00 0.00 3.71
5893 11711 7.687941 AATGCTTTTATATTATGGGACGGAG 57.312 36.000 0.00 0.00 0.00 4.63
5894 11712 8.472007 AAAATGCTTTTATATTATGGGACGGA 57.528 30.769 0.00 0.00 0.00 4.69
5895 11713 7.537306 CGAAAATGCTTTTATATTATGGGACGG 59.463 37.037 0.00 0.00 31.94 4.79
5896 11714 8.286800 TCGAAAATGCTTTTATATTATGGGACG 58.713 33.333 0.00 0.00 31.94 4.79
5897 11715 9.394477 GTCGAAAATGCTTTTATATTATGGGAC 57.606 33.333 0.00 0.00 31.94 4.46
5898 11716 9.126151 TGTCGAAAATGCTTTTATATTATGGGA 57.874 29.630 0.00 0.00 31.94 4.37
5899 11717 9.180678 GTGTCGAAAATGCTTTTATATTATGGG 57.819 33.333 0.00 0.00 31.94 4.00
5900 11718 9.950680 AGTGTCGAAAATGCTTTTATATTATGG 57.049 29.630 0.00 0.00 31.94 2.74
5904 11722 9.769093 GTGTAGTGTCGAAAATGCTTTTATATT 57.231 29.630 0.00 0.00 31.94 1.28
5905 11723 9.162764 AGTGTAGTGTCGAAAATGCTTTTATAT 57.837 29.630 0.00 0.00 31.94 0.86
5906 11724 8.542497 AGTGTAGTGTCGAAAATGCTTTTATA 57.458 30.769 0.00 0.00 31.94 0.98
5907 11725 7.435068 AGTGTAGTGTCGAAAATGCTTTTAT 57.565 32.000 0.00 0.00 31.94 1.40
5908 11726 6.854496 AGTGTAGTGTCGAAAATGCTTTTA 57.146 33.333 0.00 0.00 31.94 1.52
5909 11727 5.751243 AGTGTAGTGTCGAAAATGCTTTT 57.249 34.783 0.00 0.00 35.12 2.27
5910 11728 6.854496 TTAGTGTAGTGTCGAAAATGCTTT 57.146 33.333 0.00 0.00 0.00 3.51
5911 11729 8.718102 ATATTAGTGTAGTGTCGAAAATGCTT 57.282 30.769 0.00 0.00 0.00 3.91
5912 11730 8.718102 AATATTAGTGTAGTGTCGAAAATGCT 57.282 30.769 0.00 0.00 0.00 3.79
5919 11737 9.624697 ACGTTTTTAATATTAGTGTAGTGTCGA 57.375 29.630 0.00 0.00 0.00 4.20
5944 11762 7.001099 TCCCTCCGTTCCATAATATAAGAAC 57.999 40.000 5.67 5.67 36.19 3.01
5945 11763 6.785963 ACTCCCTCCGTTCCATAATATAAGAA 59.214 38.462 0.00 0.00 0.00 2.52
5946 11764 6.320518 ACTCCCTCCGTTCCATAATATAAGA 58.679 40.000 0.00 0.00 0.00 2.10
5947 11765 6.607004 ACTCCCTCCGTTCCATAATATAAG 57.393 41.667 0.00 0.00 0.00 1.73
5948 11766 7.243824 ACTACTCCCTCCGTTCCATAATATAA 58.756 38.462 0.00 0.00 0.00 0.98
5949 11767 6.797707 ACTACTCCCTCCGTTCCATAATATA 58.202 40.000 0.00 0.00 0.00 0.86
5950 11768 5.652324 ACTACTCCCTCCGTTCCATAATAT 58.348 41.667 0.00 0.00 0.00 1.28
5951 11769 5.070823 ACTACTCCCTCCGTTCCATAATA 57.929 43.478 0.00 0.00 0.00 0.98
5952 11770 3.924922 ACTACTCCCTCCGTTCCATAAT 58.075 45.455 0.00 0.00 0.00 1.28
5953 11771 3.393426 ACTACTCCCTCCGTTCCATAA 57.607 47.619 0.00 0.00 0.00 1.90
5954 11772 3.718434 TCTACTACTCCCTCCGTTCCATA 59.282 47.826 0.00 0.00 0.00 2.74
5955 11773 2.512896 TCTACTACTCCCTCCGTTCCAT 59.487 50.000 0.00 0.00 0.00 3.41
5956 11774 1.918262 TCTACTACTCCCTCCGTTCCA 59.082 52.381 0.00 0.00 0.00 3.53
5957 11775 2.725221 TCTACTACTCCCTCCGTTCC 57.275 55.000 0.00 0.00 0.00 3.62
5958 11776 5.595257 AATTTCTACTACTCCCTCCGTTC 57.405 43.478 0.00 0.00 0.00 3.95
5959 11777 6.370186 AAAATTTCTACTACTCCCTCCGTT 57.630 37.500 0.00 0.00 0.00 4.44
5960 11778 6.370186 AAAAATTTCTACTACTCCCTCCGT 57.630 37.500 0.00 0.00 0.00 4.69
5995 11813 2.444895 AGGCCGGGAGTCATCCTC 60.445 66.667 2.18 0.00 45.85 3.71
5996 11814 2.444895 GAGGCCGGGAGTCATCCT 60.445 66.667 2.18 0.00 45.85 3.24
5997 11815 2.444895 AGAGGCCGGGAGTCATCC 60.445 66.667 2.18 0.00 45.85 3.51
5998 11816 2.818132 CAGAGGCCGGGAGTCATC 59.182 66.667 2.18 0.00 0.00 2.92
5999 11817 3.474570 GCAGAGGCCGGGAGTCAT 61.475 66.667 2.18 0.00 0.00 3.06
6001 11819 3.453070 GATGCAGAGGCCGGGAGTC 62.453 68.421 2.18 0.00 40.13 3.36
6002 11820 3.474570 GATGCAGAGGCCGGGAGT 61.475 66.667 2.18 0.00 40.13 3.85
6003 11821 3.160047 AGATGCAGAGGCCGGGAG 61.160 66.667 2.18 0.00 40.13 4.30
6004 11822 3.473647 CAGATGCAGAGGCCGGGA 61.474 66.667 2.18 0.00 40.13 5.14
6005 11823 4.559063 CCAGATGCAGAGGCCGGG 62.559 72.222 2.18 0.00 40.13 5.73
6006 11824 3.473647 TCCAGATGCAGAGGCCGG 61.474 66.667 0.00 0.00 40.13 6.13
6007 11825 2.202987 GTCCAGATGCAGAGGCCG 60.203 66.667 0.00 0.00 40.13 6.13
6008 11826 2.037620 ATCGTCCAGATGCAGAGGCC 62.038 60.000 0.00 0.00 38.36 5.19
6009 11827 1.445095 ATCGTCCAGATGCAGAGGC 59.555 57.895 0.00 0.00 38.36 4.70
6017 11835 1.164662 GCTGCATGCATCGTCCAGAT 61.165 55.000 22.97 0.00 42.31 2.90
6018 11836 1.816679 GCTGCATGCATCGTCCAGA 60.817 57.895 22.97 0.00 42.31 3.86
6019 11837 2.713770 GCTGCATGCATCGTCCAG 59.286 61.111 22.97 8.76 42.31 3.86
6020 11838 2.825387 GGCTGCATGCATCGTCCA 60.825 61.111 22.97 0.00 45.15 4.02
6021 11839 2.825387 TGGCTGCATGCATCGTCC 60.825 61.111 22.97 19.03 45.15 4.79
6022 11840 1.651240 AAGTGGCTGCATGCATCGTC 61.651 55.000 22.97 13.00 45.15 4.20
6023 11841 1.246056 AAAGTGGCTGCATGCATCGT 61.246 50.000 22.97 7.77 45.15 3.73
6024 11842 0.734309 TAAAGTGGCTGCATGCATCG 59.266 50.000 22.97 12.00 45.15 3.84
6025 11843 3.447918 AATAAAGTGGCTGCATGCATC 57.552 42.857 22.97 17.75 45.15 3.91
6026 11844 5.540400 ATTAATAAAGTGGCTGCATGCAT 57.460 34.783 22.97 6.91 45.15 3.96
6027 11845 5.341872 AATTAATAAAGTGGCTGCATGCA 57.658 34.783 21.29 21.29 45.15 3.96
6028 11846 7.869429 AGAATAATTAATAAAGTGGCTGCATGC 59.131 33.333 11.82 11.82 41.94 4.06
6029 11847 9.403110 GAGAATAATTAATAAAGTGGCTGCATG 57.597 33.333 0.50 0.00 0.00 4.06
6030 11848 9.135189 TGAGAATAATTAATAAAGTGGCTGCAT 57.865 29.630 0.50 0.00 0.00 3.96
6031 11849 8.405531 GTGAGAATAATTAATAAAGTGGCTGCA 58.594 33.333 0.50 0.00 0.00 4.41
6032 11850 8.405531 TGTGAGAATAATTAATAAAGTGGCTGC 58.594 33.333 0.00 0.00 0.00 5.25
6046 11864 9.520515 ACTTTGTAAGGACATGTGAGAATAATT 57.479 29.630 1.15 0.00 34.86 1.40
6047 11865 9.167311 GACTTTGTAAGGACATGTGAGAATAAT 57.833 33.333 1.15 0.00 34.86 1.28
6048 11866 8.154203 TGACTTTGTAAGGACATGTGAGAATAA 58.846 33.333 1.15 0.00 34.86 1.40
6049 11867 7.676004 TGACTTTGTAAGGACATGTGAGAATA 58.324 34.615 1.15 0.00 34.86 1.75
6050 11868 6.533730 TGACTTTGTAAGGACATGTGAGAAT 58.466 36.000 1.15 0.00 34.86 2.40
6051 11869 5.924356 TGACTTTGTAAGGACATGTGAGAA 58.076 37.500 1.15 0.00 34.86 2.87
6052 11870 5.545063 TGACTTTGTAAGGACATGTGAGA 57.455 39.130 1.15 0.00 34.86 3.27
6053 11871 6.873605 TGTATGACTTTGTAAGGACATGTGAG 59.126 38.462 1.15 0.00 34.86 3.51
6054 11872 6.764379 TGTATGACTTTGTAAGGACATGTGA 58.236 36.000 1.15 0.00 34.86 3.58
6055 11873 7.041440 TGTTGTATGACTTTGTAAGGACATGTG 60.041 37.037 1.15 0.00 34.86 3.21
6056 11874 6.995686 TGTTGTATGACTTTGTAAGGACATGT 59.004 34.615 0.00 0.00 34.86 3.21
6057 11875 7.433708 TGTTGTATGACTTTGTAAGGACATG 57.566 36.000 0.00 0.00 34.86 3.21
6058 11876 8.635765 ATTGTTGTATGACTTTGTAAGGACAT 57.364 30.769 0.00 0.00 34.86 3.06
6059 11877 9.562408 TTATTGTTGTATGACTTTGTAAGGACA 57.438 29.630 0.00 0.00 0.00 4.02
6068 11886 9.908152 GGCTTTAGTTTATTGTTGTATGACTTT 57.092 29.630 0.00 0.00 0.00 2.66
6069 11887 9.073475 TGGCTTTAGTTTATTGTTGTATGACTT 57.927 29.630 0.00 0.00 0.00 3.01
6070 11888 8.512138 GTGGCTTTAGTTTATTGTTGTATGACT 58.488 33.333 0.00 0.00 0.00 3.41
6071 11889 7.753580 GGTGGCTTTAGTTTATTGTTGTATGAC 59.246 37.037 0.00 0.00 0.00 3.06
6072 11890 7.361371 CGGTGGCTTTAGTTTATTGTTGTATGA 60.361 37.037 0.00 0.00 0.00 2.15
6073 11891 6.745450 CGGTGGCTTTAGTTTATTGTTGTATG 59.255 38.462 0.00 0.00 0.00 2.39
6074 11892 6.431852 ACGGTGGCTTTAGTTTATTGTTGTAT 59.568 34.615 0.00 0.00 0.00 2.29
6075 11893 5.764192 ACGGTGGCTTTAGTTTATTGTTGTA 59.236 36.000 0.00 0.00 0.00 2.41
6076 11894 4.581409 ACGGTGGCTTTAGTTTATTGTTGT 59.419 37.500 0.00 0.00 0.00 3.32
6077 11895 5.048991 AGACGGTGGCTTTAGTTTATTGTTG 60.049 40.000 0.00 0.00 0.00 3.33
6078 11896 5.067954 AGACGGTGGCTTTAGTTTATTGTT 58.932 37.500 0.00 0.00 0.00 2.83
6079 11897 4.648651 AGACGGTGGCTTTAGTTTATTGT 58.351 39.130 0.00 0.00 0.00 2.71
6080 11898 6.674760 GCTTAGACGGTGGCTTTAGTTTATTG 60.675 42.308 0.00 0.00 0.00 1.90
6081 11899 5.353400 GCTTAGACGGTGGCTTTAGTTTATT 59.647 40.000 0.00 0.00 0.00 1.40
6082 11900 4.874396 GCTTAGACGGTGGCTTTAGTTTAT 59.126 41.667 0.00 0.00 0.00 1.40
6083 11901 4.248058 GCTTAGACGGTGGCTTTAGTTTA 58.752 43.478 0.00 0.00 0.00 2.01
6084 11902 3.072211 GCTTAGACGGTGGCTTTAGTTT 58.928 45.455 0.00 0.00 0.00 2.66
6085 11903 2.038033 TGCTTAGACGGTGGCTTTAGTT 59.962 45.455 0.00 0.00 0.00 2.24
6086 11904 1.621814 TGCTTAGACGGTGGCTTTAGT 59.378 47.619 0.00 0.00 0.00 2.24
6087 11905 2.380084 TGCTTAGACGGTGGCTTTAG 57.620 50.000 0.00 0.00 0.00 1.85
6088 11906 2.224329 TGTTGCTTAGACGGTGGCTTTA 60.224 45.455 0.00 0.00 0.00 1.85
6089 11907 1.235724 GTTGCTTAGACGGTGGCTTT 58.764 50.000 0.00 0.00 0.00 3.51
6090 11908 0.107831 TGTTGCTTAGACGGTGGCTT 59.892 50.000 0.00 0.00 0.00 4.35
6091 11909 0.107831 TTGTTGCTTAGACGGTGGCT 59.892 50.000 0.00 0.00 0.00 4.75
6092 11910 0.237498 GTTGTTGCTTAGACGGTGGC 59.763 55.000 0.00 0.00 0.00 5.01
6093 11911 1.531149 CAGTTGTTGCTTAGACGGTGG 59.469 52.381 0.00 0.00 0.00 4.61
6094 11912 2.210116 ACAGTTGTTGCTTAGACGGTG 58.790 47.619 0.00 0.00 0.00 4.94
6095 11913 2.480845 GACAGTTGTTGCTTAGACGGT 58.519 47.619 0.00 0.00 0.00 4.83
6096 11914 1.455786 CGACAGTTGTTGCTTAGACGG 59.544 52.381 0.00 0.00 0.00 4.79
6097 11915 2.837337 CGACAGTTGTTGCTTAGACG 57.163 50.000 0.00 0.00 0.00 4.18
6105 11923 1.865865 AGGTGTAGCGACAGTTGTTG 58.134 50.000 0.00 0.00 35.82 3.33
6106 11924 3.368116 GGATAGGTGTAGCGACAGTTGTT 60.368 47.826 0.00 0.00 35.82 2.83
6107 11925 2.165845 GGATAGGTGTAGCGACAGTTGT 59.834 50.000 0.00 0.00 35.82 3.32
6108 11926 2.165641 TGGATAGGTGTAGCGACAGTTG 59.834 50.000 0.00 0.00 35.82 3.16
6109 11927 2.453521 TGGATAGGTGTAGCGACAGTT 58.546 47.619 0.00 0.00 35.82 3.16
6110 11928 2.139323 TGGATAGGTGTAGCGACAGT 57.861 50.000 0.00 0.00 35.82 3.55
6111 11929 3.735237 ATTGGATAGGTGTAGCGACAG 57.265 47.619 0.00 0.00 35.82 3.51
6112 11930 5.601583 TTAATTGGATAGGTGTAGCGACA 57.398 39.130 0.00 0.00 0.00 4.35
6113 11931 6.220930 TCATTAATTGGATAGGTGTAGCGAC 58.779 40.000 0.00 0.00 0.00 5.19
6114 11932 6.413783 TCATTAATTGGATAGGTGTAGCGA 57.586 37.500 0.00 0.00 0.00 4.93
6115 11933 6.147821 CCTTCATTAATTGGATAGGTGTAGCG 59.852 42.308 0.00 0.00 0.00 4.26
6116 11934 6.431234 CCCTTCATTAATTGGATAGGTGTAGC 59.569 42.308 0.00 0.00 0.00 3.58
6117 11935 6.942576 CCCCTTCATTAATTGGATAGGTGTAG 59.057 42.308 0.00 0.00 0.00 2.74
6118 11936 6.391649 ACCCCTTCATTAATTGGATAGGTGTA 59.608 38.462 0.00 0.00 0.00 2.90
6119 11937 5.195756 ACCCCTTCATTAATTGGATAGGTGT 59.804 40.000 0.00 0.00 0.00 4.16
6120 11938 5.536161 CACCCCTTCATTAATTGGATAGGTG 59.464 44.000 0.00 0.00 0.00 4.00
6121 11939 5.705400 CACCCCTTCATTAATTGGATAGGT 58.295 41.667 0.00 0.00 0.00 3.08
6122 11940 4.524328 GCACCCCTTCATTAATTGGATAGG 59.476 45.833 0.00 0.00 0.00 2.57
6123 11941 5.242393 CAGCACCCCTTCATTAATTGGATAG 59.758 44.000 0.00 0.00 0.00 2.08
6124 11942 5.103728 TCAGCACCCCTTCATTAATTGGATA 60.104 40.000 0.00 0.00 0.00 2.59
6125 11943 3.962718 CAGCACCCCTTCATTAATTGGAT 59.037 43.478 0.00 0.00 0.00 3.41
6126 11944 3.011144 TCAGCACCCCTTCATTAATTGGA 59.989 43.478 0.00 0.00 0.00 3.53
6127 11945 3.364549 TCAGCACCCCTTCATTAATTGG 58.635 45.455 0.00 0.00 0.00 3.16
6128 11946 5.829924 ACTATCAGCACCCCTTCATTAATTG 59.170 40.000 0.00 0.00 0.00 2.32
6129 11947 6.018433 ACTATCAGCACCCCTTCATTAATT 57.982 37.500 0.00 0.00 0.00 1.40
6130 11948 5.370880 AGACTATCAGCACCCCTTCATTAAT 59.629 40.000 0.00 0.00 0.00 1.40
6131 11949 4.721776 AGACTATCAGCACCCCTTCATTAA 59.278 41.667 0.00 0.00 0.00 1.40
6132 11950 4.101585 CAGACTATCAGCACCCCTTCATTA 59.898 45.833 0.00 0.00 0.00 1.90
6133 11951 3.118112 CAGACTATCAGCACCCCTTCATT 60.118 47.826 0.00 0.00 0.00 2.57
6134 11952 2.437281 CAGACTATCAGCACCCCTTCAT 59.563 50.000 0.00 0.00 0.00 2.57
6135 11953 1.833630 CAGACTATCAGCACCCCTTCA 59.166 52.381 0.00 0.00 0.00 3.02
6136 11954 1.139853 CCAGACTATCAGCACCCCTTC 59.860 57.143 0.00 0.00 0.00 3.46
6137 11955 1.207791 CCAGACTATCAGCACCCCTT 58.792 55.000 0.00 0.00 0.00 3.95
6138 11956 0.692419 CCCAGACTATCAGCACCCCT 60.692 60.000 0.00 0.00 0.00 4.79
6139 11957 1.832912 CCCAGACTATCAGCACCCC 59.167 63.158 0.00 0.00 0.00 4.95
6140 11958 1.147153 GCCCAGACTATCAGCACCC 59.853 63.158 0.00 0.00 0.00 4.61
6141 11959 1.147153 GGCCCAGACTATCAGCACC 59.853 63.158 0.00 0.00 0.00 5.01
6142 11960 1.414158 TAGGCCCAGACTATCAGCAC 58.586 55.000 0.00 0.00 0.00 4.40
6143 11961 2.174685 TTAGGCCCAGACTATCAGCA 57.825 50.000 0.00 0.00 0.00 4.41
6144 11962 3.055747 GGTATTAGGCCCAGACTATCAGC 60.056 52.174 0.00 0.00 0.00 4.26
6145 11963 4.160329 TGGTATTAGGCCCAGACTATCAG 58.840 47.826 0.00 0.00 0.00 2.90
6146 11964 4.207698 TGGTATTAGGCCCAGACTATCA 57.792 45.455 0.00 0.00 0.00 2.15
6147 11965 5.562298 TTTGGTATTAGGCCCAGACTATC 57.438 43.478 0.00 0.00 31.04 2.08
6148 11966 7.023120 TCTATTTGGTATTAGGCCCAGACTAT 58.977 38.462 0.00 0.00 31.04 2.12
6149 11967 6.269307 GTCTATTTGGTATTAGGCCCAGACTA 59.731 42.308 0.00 0.00 31.04 2.59
6150 11968 5.071923 GTCTATTTGGTATTAGGCCCAGACT 59.928 44.000 0.00 0.00 31.04 3.24
6151 11969 5.163237 TGTCTATTTGGTATTAGGCCCAGAC 60.163 44.000 0.00 0.00 31.04 3.51
6152 11970 4.972568 TGTCTATTTGGTATTAGGCCCAGA 59.027 41.667 0.00 0.00 31.04 3.86
6153 11971 5.304686 TGTCTATTTGGTATTAGGCCCAG 57.695 43.478 0.00 0.00 31.04 4.45
6154 11972 5.512404 CGATGTCTATTTGGTATTAGGCCCA 60.512 44.000 0.00 0.00 0.00 5.36
6155 11973 4.935808 CGATGTCTATTTGGTATTAGGCCC 59.064 45.833 0.00 0.00 0.00 5.80
6156 11974 4.392138 GCGATGTCTATTTGGTATTAGGCC 59.608 45.833 0.00 0.00 0.00 5.19
6157 11975 4.994852 TGCGATGTCTATTTGGTATTAGGC 59.005 41.667 0.00 0.00 0.00 3.93
6158 11976 5.120830 GCTGCGATGTCTATTTGGTATTAGG 59.879 44.000 0.00 0.00 0.00 2.69
6159 11977 5.120830 GGCTGCGATGTCTATTTGGTATTAG 59.879 44.000 0.00 0.00 0.00 1.73
6160 11978 4.994852 GGCTGCGATGTCTATTTGGTATTA 59.005 41.667 0.00 0.00 0.00 0.98
6161 11979 3.815401 GGCTGCGATGTCTATTTGGTATT 59.185 43.478 0.00 0.00 0.00 1.89
6162 11980 3.181455 TGGCTGCGATGTCTATTTGGTAT 60.181 43.478 0.00 0.00 0.00 2.73
6163 11981 2.169561 TGGCTGCGATGTCTATTTGGTA 59.830 45.455 0.00 0.00 0.00 3.25
6164 11982 1.065491 TGGCTGCGATGTCTATTTGGT 60.065 47.619 0.00 0.00 0.00 3.67
6165 11983 1.600957 CTGGCTGCGATGTCTATTTGG 59.399 52.381 0.00 0.00 0.00 3.28
6166 11984 2.286294 GTCTGGCTGCGATGTCTATTTG 59.714 50.000 0.00 0.00 0.00 2.32
6167 11985 2.555199 GTCTGGCTGCGATGTCTATTT 58.445 47.619 0.00 0.00 0.00 1.40
6168 11986 1.202580 GGTCTGGCTGCGATGTCTATT 60.203 52.381 0.00 0.00 0.00 1.73
6169 11987 0.390860 GGTCTGGCTGCGATGTCTAT 59.609 55.000 0.00 0.00 0.00 1.98
6170 11988 0.684479 AGGTCTGGCTGCGATGTCTA 60.684 55.000 0.00 0.00 0.00 2.59
6171 11989 0.684479 TAGGTCTGGCTGCGATGTCT 60.684 55.000 0.00 0.00 0.00 3.41
6172 11990 0.175760 TTAGGTCTGGCTGCGATGTC 59.824 55.000 0.00 0.00 0.00 3.06
6173 11991 0.108138 GTTAGGTCTGGCTGCGATGT 60.108 55.000 0.00 0.00 0.00 3.06
6174 11992 0.108186 TGTTAGGTCTGGCTGCGATG 60.108 55.000 0.00 0.00 0.00 3.84
6175 11993 0.833287 ATGTTAGGTCTGGCTGCGAT 59.167 50.000 0.00 0.00 0.00 4.58
6176 11994 0.175760 GATGTTAGGTCTGGCTGCGA 59.824 55.000 0.00 0.00 0.00 5.10
6177 11995 0.176680 AGATGTTAGGTCTGGCTGCG 59.823 55.000 0.00 0.00 0.00 5.18
6178 11996 3.133003 TCTTAGATGTTAGGTCTGGCTGC 59.867 47.826 0.00 0.00 0.00 5.25
6179 11997 4.442192 GGTCTTAGATGTTAGGTCTGGCTG 60.442 50.000 0.00 0.00 0.00 4.85
6180 11998 3.707102 GGTCTTAGATGTTAGGTCTGGCT 59.293 47.826 0.00 0.00 0.00 4.75
6181 11999 3.707102 AGGTCTTAGATGTTAGGTCTGGC 59.293 47.826 0.00 0.00 0.00 4.85
6182 12000 4.956700 TCAGGTCTTAGATGTTAGGTCTGG 59.043 45.833 0.00 0.00 0.00 3.86
6183 12001 5.068460 CCTCAGGTCTTAGATGTTAGGTCTG 59.932 48.000 0.00 0.00 0.00 3.51
6184 12002 5.205056 CCTCAGGTCTTAGATGTTAGGTCT 58.795 45.833 0.00 0.00 0.00 3.85
6185 12003 4.957327 ACCTCAGGTCTTAGATGTTAGGTC 59.043 45.833 0.00 0.00 28.80 3.85
6186 12004 4.949121 ACCTCAGGTCTTAGATGTTAGGT 58.051 43.478 0.00 4.26 0.00 3.08
6200 12018 0.401395 TCTTGGTTGGGACCTCAGGT 60.401 55.000 0.00 0.00 46.66 4.00
6201 12019 0.036875 GTCTTGGTTGGGACCTCAGG 59.963 60.000 0.00 0.00 46.66 3.86
6202 12020 0.320771 CGTCTTGGTTGGGACCTCAG 60.321 60.000 0.00 0.00 46.66 3.35
6203 12021 1.752198 CGTCTTGGTTGGGACCTCA 59.248 57.895 0.00 0.00 46.66 3.86
6204 12022 1.671379 GCGTCTTGGTTGGGACCTC 60.671 63.158 0.00 0.00 46.66 3.85
6205 12023 2.430367 GCGTCTTGGTTGGGACCT 59.570 61.111 0.00 0.00 46.66 3.85
6206 12024 2.671963 GGCGTCTTGGTTGGGACC 60.672 66.667 0.00 0.00 46.71 4.46
6207 12025 1.966451 CAGGCGTCTTGGTTGGGAC 60.966 63.158 0.00 0.00 0.00 4.46
6208 12026 2.429930 CAGGCGTCTTGGTTGGGA 59.570 61.111 0.00 0.00 0.00 4.37
6209 12027 3.365265 GCAGGCGTCTTGGTTGGG 61.365 66.667 0.00 0.00 0.00 4.12
6210 12028 3.365265 GGCAGGCGTCTTGGTTGG 61.365 66.667 0.00 0.00 0.00 3.77
6211 12029 3.726517 CGGCAGGCGTCTTGGTTG 61.727 66.667 8.53 0.00 0.00 3.77
6215 12033 3.385749 ATACCCGGCAGGCGTCTTG 62.386 63.158 16.17 3.40 40.58 3.02
6216 12034 3.081409 ATACCCGGCAGGCGTCTT 61.081 61.111 16.17 1.19 40.58 3.01
6217 12035 3.849951 CATACCCGGCAGGCGTCT 61.850 66.667 16.17 1.84 40.58 4.18
6229 12047 0.529992 GACTAGTGGGTGCGCATACC 60.530 60.000 22.72 22.72 40.10 2.73
6230 12048 0.529992 GGACTAGTGGGTGCGCATAC 60.530 60.000 15.91 13.83 0.00 2.39
6231 12049 0.973496 TGGACTAGTGGGTGCGCATA 60.973 55.000 15.91 0.00 0.00 3.14
6232 12050 2.244117 CTGGACTAGTGGGTGCGCAT 62.244 60.000 15.91 0.00 0.00 4.73
6233 12051 2.920384 TGGACTAGTGGGTGCGCA 60.920 61.111 5.66 5.66 0.00 6.09
6234 12052 2.125512 CTGGACTAGTGGGTGCGC 60.126 66.667 0.00 0.00 0.00 6.09
6235 12053 2.125512 GCTGGACTAGTGGGTGCG 60.126 66.667 0.00 0.00 0.00 5.34
6236 12054 2.125512 CGCTGGACTAGTGGGTGC 60.126 66.667 0.00 0.00 33.19 5.01
6237 12055 1.079819 CACGCTGGACTAGTGGGTG 60.080 63.158 0.00 7.31 41.29 4.61
6238 12056 2.943978 GCACGCTGGACTAGTGGGT 61.944 63.158 0.00 0.00 42.44 4.51
6239 12057 2.125512 GCACGCTGGACTAGTGGG 60.126 66.667 0.00 0.30 43.34 4.61
6240 12058 1.153745 GAGCACGCTGGACTAGTGG 60.154 63.158 0.00 0.00 41.29 4.00
6241 12059 1.153745 GGAGCACGCTGGACTAGTG 60.154 63.158 0.00 0.00 42.68 2.74
6242 12060 1.304547 AGGAGCACGCTGGACTAGT 60.305 57.895 0.00 0.00 0.00 2.57
6243 12061 1.315981 TGAGGAGCACGCTGGACTAG 61.316 60.000 0.00 0.00 0.00 2.57
6244 12062 0.898326 TTGAGGAGCACGCTGGACTA 60.898 55.000 0.00 0.00 0.00 2.59
6245 12063 2.210013 TTGAGGAGCACGCTGGACT 61.210 57.895 0.00 0.00 0.00 3.85
6246 12064 2.029844 GTTGAGGAGCACGCTGGAC 61.030 63.158 0.00 0.00 0.00 4.02
6247 12065 2.343758 GTTGAGGAGCACGCTGGA 59.656 61.111 0.00 0.00 0.00 3.86
6248 12066 2.743928 GGTTGAGGAGCACGCTGG 60.744 66.667 0.00 0.00 0.00 4.85
6249 12067 2.031012 TGGTTGAGGAGCACGCTG 59.969 61.111 0.00 0.00 0.00 5.18
6250 12068 2.345244 CTGGTTGAGGAGCACGCT 59.655 61.111 0.00 0.00 0.00 5.07
6251 12069 2.743928 CCTGGTTGAGGAGCACGC 60.744 66.667 0.00 0.00 46.33 5.34
6252 12070 3.059982 TCCTGGTTGAGGAGCACG 58.940 61.111 0.00 0.00 46.96 5.34
6267 12085 4.910585 CATACCCGGCAGGCGTCC 62.911 72.222 16.17 0.00 40.58 4.79
6268 12086 3.792053 CTCATACCCGGCAGGCGTC 62.792 68.421 16.17 0.00 40.58 5.19
6269 12087 3.849951 CTCATACCCGGCAGGCGT 61.850 66.667 16.17 0.00 40.58 5.68
6270 12088 4.609018 CCTCATACCCGGCAGGCG 62.609 72.222 9.96 9.96 40.58 5.52
6271 12089 4.937431 GCCTCATACCCGGCAGGC 62.937 72.222 0.00 3.18 45.59 4.85
6293 12111 2.496828 GATTGGTGGCAAGTGGCTGC 62.497 60.000 6.41 0.00 44.01 5.25
6294 12112 1.588082 GATTGGTGGCAAGTGGCTG 59.412 57.895 6.41 0.00 44.01 4.85
6295 12113 1.607467 GGATTGGTGGCAAGTGGCT 60.607 57.895 6.41 0.00 44.01 4.75
6296 12114 1.259840 ATGGATTGGTGGCAAGTGGC 61.260 55.000 0.00 0.00 43.74 5.01
6297 12115 0.819582 GATGGATTGGTGGCAAGTGG 59.180 55.000 0.00 0.00 0.00 4.00
6298 12116 1.843368 AGATGGATTGGTGGCAAGTG 58.157 50.000 0.00 0.00 0.00 3.16
6299 12117 2.225091 TGAAGATGGATTGGTGGCAAGT 60.225 45.455 0.00 0.00 0.00 3.16
6300 12118 2.426024 CTGAAGATGGATTGGTGGCAAG 59.574 50.000 0.00 0.00 0.00 4.01
6301 12119 2.041485 TCTGAAGATGGATTGGTGGCAA 59.959 45.455 0.00 0.00 0.00 4.52
6302 12120 1.634973 TCTGAAGATGGATTGGTGGCA 59.365 47.619 0.00 0.00 0.00 4.92
6303 12121 2.295885 CTCTGAAGATGGATTGGTGGC 58.704 52.381 0.00 0.00 0.00 5.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.