Multiple sequence alignment - TraesCS5D01G312400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G312400 chr5D 100.000 5490 0 0 1 5490 408323268 408317779 0.000000e+00 10139.0
1 TraesCS5D01G312400 chr5D 86.429 280 33 4 416 694 502539643 502539918 8.940000e-78 302.0
2 TraesCS5D01G312400 chr5D 87.931 232 26 2 1 230 62530231 62530000 7.010000e-69 272.0
3 TraesCS5D01G312400 chr5D 97.619 42 1 0 230 271 5598916 5598957 7.630000e-09 73.1
4 TraesCS5D01G312400 chr5B 92.797 4831 170 63 758 5490 489813910 489809160 0.000000e+00 6830.0
5 TraesCS5D01G312400 chr5B 89.697 165 16 1 232 396 489819309 489819146 5.570000e-50 209.0
6 TraesCS5D01G312400 chr5A 92.153 4078 183 46 729 4721 514157568 514153543 0.000000e+00 5631.0
7 TraesCS5D01G312400 chr5A 97.011 736 18 3 4756 5490 514153547 514152815 0.000000e+00 1234.0
8 TraesCS5D01G312400 chr1B 84.294 503 53 10 3766 4265 427067260 427066781 8.330000e-128 468.0
9 TraesCS5D01G312400 chr1B 86.890 328 36 5 3358 3684 427067827 427067506 1.450000e-95 361.0
10 TraesCS5D01G312400 chr1B 86.525 282 27 7 420 698 98929025 98928752 3.210000e-77 300.0
11 TraesCS5D01G312400 chr3A 89.643 280 27 2 417 695 81480718 81480996 6.760000e-94 355.0
12 TraesCS5D01G312400 chrUn 87.857 280 28 3 423 698 296175133 296174856 1.910000e-84 324.0
13 TraesCS5D01G312400 chrUn 87.500 280 29 3 423 698 296164949 296164672 8.870000e-83 318.0
14 TraesCS5D01G312400 chr3D 88.519 270 24 4 423 687 415715950 415715683 2.470000e-83 320.0
15 TraesCS5D01G312400 chr3D 89.083 229 23 2 1 227 140411708 140411936 3.240000e-72 283.0
16 TraesCS5D01G312400 chr2A 87.546 273 31 3 423 694 765582652 765582382 4.130000e-81 313.0
17 TraesCS5D01G312400 chr1A 86.282 277 32 5 423 695 328801720 328801446 4.160000e-76 296.0
18 TraesCS5D01G312400 chr7B 86.567 268 32 4 420 685 587481556 587481291 5.380000e-75 292.0
19 TraesCS5D01G312400 chr2B 85.612 278 35 4 418 695 790213990 790214262 2.500000e-73 287.0
20 TraesCS5D01G312400 chr2B 79.085 153 24 5 38 188 569975031 569974885 1.260000e-16 99.0
21 TraesCS5D01G312400 chr4D 88.646 229 24 2 1 227 460656479 460656707 1.510000e-70 278.0
22 TraesCS5D01G312400 chr4D 88.646 229 24 2 1 227 460660579 460660807 1.510000e-70 278.0
23 TraesCS5D01G312400 chr4D 88.646 229 24 2 1 227 460662949 460663177 1.510000e-70 278.0
24 TraesCS5D01G312400 chr4D 88.646 229 24 2 1 227 460665231 460665459 1.510000e-70 278.0
25 TraesCS5D01G312400 chr4D 88.646 229 24 2 1 227 460666496 460666724 1.510000e-70 278.0
26 TraesCS5D01G312400 chr3B 87.500 232 27 2 1 230 775734647 775734416 3.260000e-67 267.0
27 TraesCS5D01G312400 chr6D 86.957 230 26 4 1 227 5069885 5070113 7.060000e-64 255.0
28 TraesCS5D01G312400 chr6A 95.161 62 2 1 227 288 581803327 581803387 4.530000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G312400 chr5D 408317779 408323268 5489 True 10139.0 10139 100.000 1 5490 1 chr5D.!!$R2 5489
1 TraesCS5D01G312400 chr5B 489809160 489813910 4750 True 6830.0 6830 92.797 758 5490 1 chr5B.!!$R1 4732
2 TraesCS5D01G312400 chr5A 514152815 514157568 4753 True 3432.5 5631 94.582 729 5490 2 chr5A.!!$R1 4761
3 TraesCS5D01G312400 chr1B 427066781 427067827 1046 True 414.5 468 85.592 3358 4265 2 chr1B.!!$R2 907
4 TraesCS5D01G312400 chr4D 460656479 460666724 10245 False 278.0 278 88.646 1 227 5 chr4D.!!$F1 226

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
494 541 0.035152 TCAAATCCTGGTGCTCGCAT 60.035 50.0 0.00 0.0 0.00 4.73 F
1426 2186 0.178981 ATTCACTGCTTGTGCTGGGT 60.179 50.0 5.71 0.0 45.81 4.51 F
1985 4875 0.040067 CACGCTTTTTCCAGTGAGCC 60.040 55.0 0.00 0.0 36.79 4.70 F
1986 4876 0.465460 ACGCTTTTTCCAGTGAGCCA 60.465 50.0 0.00 0.0 0.00 4.75 F
2879 5783 1.825090 TGCTGGATCGTCTGCAAATT 58.175 45.0 1.91 0.0 38.36 1.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1557 2343 0.108329 TAGCGCAGTAAACTGAGGGC 60.108 55.000 11.47 12.38 46.59 5.19 R
2852 5756 2.202932 CGATCCAGCAACGGGGAG 60.203 66.667 0.00 0.00 36.45 4.30 R
3749 9685 2.305927 ACACATCAGAATCTCCCGGTTT 59.694 45.455 0.00 0.00 0.00 3.27 R
4432 11403 1.063492 TGCCTGATTGCATCCCAGAAT 60.063 47.619 10.82 0.00 36.04 2.40 R
5256 12269 0.614979 GGACACAGGGAGAGCAGGTA 60.615 60.000 0.00 0.00 0.00 3.08 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 2.453080 GTTCGTCTGTGTTCGTGTGTA 58.547 47.619 0.00 0.00 0.00 2.90
49 50 3.918591 GTCTGTGTTCGTGTGTATACAGG 59.081 47.826 5.62 6.01 42.50 4.00
56 57 5.185442 TGTTCGTGTGTATACAGGTTGGATA 59.815 40.000 5.62 0.00 41.97 2.59
57 58 6.127281 TGTTCGTGTGTATACAGGTTGGATAT 60.127 38.462 5.62 0.00 41.97 1.63
60 61 7.332557 TCGTGTGTATACAGGTTGGATATTTT 58.667 34.615 5.62 0.00 41.97 1.82
61 62 7.493320 TCGTGTGTATACAGGTTGGATATTTTC 59.507 37.037 5.62 0.00 41.97 2.29
78 80 4.966965 TTTTCGATCTACGCTCTCTTCT 57.033 40.909 0.00 0.00 42.26 2.85
82 84 2.540516 CGATCTACGCTCTCTTCTTCGA 59.459 50.000 0.00 0.00 34.51 3.71
89 91 0.797542 CTCTCTTCTTCGACGACGGT 59.202 55.000 7.55 0.00 40.21 4.83
101 103 1.278637 CGACGGTTGTTGTTCTGGC 59.721 57.895 0.00 0.00 0.00 4.85
117 119 2.203070 GCGCACTGGTCCTATGGG 60.203 66.667 0.30 5.86 0.00 4.00
136 138 1.505425 GGCCTTAACACGACGACTTT 58.495 50.000 0.00 0.00 0.00 2.66
138 140 2.401351 GCCTTAACACGACGACTTTCT 58.599 47.619 0.00 0.00 0.00 2.52
141 143 3.424529 CCTTAACACGACGACTTTCTGAC 59.575 47.826 0.00 0.00 0.00 3.51
145 147 2.159282 ACACGACGACTTTCTGACTGTT 60.159 45.455 0.00 0.00 0.00 3.16
155 157 6.344780 CGACTTTCTGACTGTTTACTACAACG 60.345 42.308 0.00 0.00 36.02 4.10
157 159 6.696148 ACTTTCTGACTGTTTACTACAACGAG 59.304 38.462 0.00 0.00 36.02 4.18
174 176 4.796495 GGTTTGCCCGGCTCCGAT 62.796 66.667 11.61 0.00 42.83 4.18
233 280 3.839293 CTCAGTGCTAGTAGTGGTGTTC 58.161 50.000 14.76 0.00 0.00 3.18
241 288 4.928020 GCTAGTAGTGGTGTTCTTTGTACC 59.072 45.833 0.00 0.00 35.05 3.34
247 294 4.774660 TGGTGTTCTTTGTACCACCTTA 57.225 40.909 15.07 0.00 46.02 2.69
265 312 8.109634 ACCACCTTAACAGTTGATGAATAGATT 58.890 33.333 0.00 0.00 0.00 2.40
267 314 9.166173 CACCTTAACAGTTGATGAATAGATTGA 57.834 33.333 0.00 0.00 0.00 2.57
281 328 8.716646 TGAATAGATTGAAAGTTATTCTCGCA 57.283 30.769 5.13 0.00 34.92 5.10
308 355 7.510549 AAAAAGGTCGATGAAGAAAGATGAA 57.489 32.000 0.00 0.00 0.00 2.57
309 356 6.734104 AAAGGTCGATGAAGAAAGATGAAG 57.266 37.500 0.00 0.00 0.00 3.02
310 357 4.187694 AGGTCGATGAAGAAAGATGAAGC 58.812 43.478 0.00 0.00 0.00 3.86
311 358 4.081198 AGGTCGATGAAGAAAGATGAAGCT 60.081 41.667 0.00 0.00 0.00 3.74
312 359 4.033817 GGTCGATGAAGAAAGATGAAGCTG 59.966 45.833 0.00 0.00 0.00 4.24
315 362 4.633126 CGATGAAGAAAGATGAAGCTGGAA 59.367 41.667 0.00 0.00 0.00 3.53
316 363 5.122869 CGATGAAGAAAGATGAAGCTGGAAA 59.877 40.000 0.00 0.00 0.00 3.13
318 365 5.624159 TGAAGAAAGATGAAGCTGGAAAGA 58.376 37.500 0.00 0.00 0.00 2.52
319 366 5.471456 TGAAGAAAGATGAAGCTGGAAAGAC 59.529 40.000 0.00 0.00 0.00 3.01
320 367 5.240013 AGAAAGATGAAGCTGGAAAGACT 57.760 39.130 0.00 0.00 0.00 3.24
322 369 6.067350 AGAAAGATGAAGCTGGAAAGACTTT 58.933 36.000 0.00 0.00 0.00 2.66
323 370 7.227156 AGAAAGATGAAGCTGGAAAGACTTTA 58.773 34.615 0.00 0.00 0.00 1.85
325 372 5.495640 AGATGAAGCTGGAAAGACTTTAGG 58.504 41.667 0.00 0.00 0.00 2.69
326 373 4.021102 TGAAGCTGGAAAGACTTTAGGG 57.979 45.455 0.00 0.00 0.00 3.53
328 375 3.704800 AGCTGGAAAGACTTTAGGGAC 57.295 47.619 0.00 0.00 0.00 4.46
329 376 2.979678 AGCTGGAAAGACTTTAGGGACA 59.020 45.455 0.00 0.00 0.00 4.02
331 378 4.043435 AGCTGGAAAGACTTTAGGGACAAT 59.957 41.667 0.00 0.00 0.00 2.71
332 379 4.156739 GCTGGAAAGACTTTAGGGACAATG 59.843 45.833 0.00 0.00 0.00 2.82
333 380 4.662278 TGGAAAGACTTTAGGGACAATGG 58.338 43.478 0.00 0.00 0.00 3.16
334 381 4.105697 TGGAAAGACTTTAGGGACAATGGT 59.894 41.667 0.00 0.00 0.00 3.55
335 382 5.311121 TGGAAAGACTTTAGGGACAATGGTA 59.689 40.000 0.00 0.00 0.00 3.25
337 384 6.318900 GGAAAGACTTTAGGGACAATGGTATG 59.681 42.308 0.00 0.00 0.00 2.39
339 386 4.227300 AGACTTTAGGGACAATGGTATGCA 59.773 41.667 0.00 0.00 0.00 3.96
340 387 5.103940 AGACTTTAGGGACAATGGTATGCAT 60.104 40.000 3.79 3.79 0.00 3.96
342 389 5.957774 ACTTTAGGGACAATGGTATGCATTT 59.042 36.000 3.54 0.00 0.00 2.32
343 390 6.440328 ACTTTAGGGACAATGGTATGCATTTT 59.560 34.615 3.54 0.00 0.00 1.82
344 391 7.617723 ACTTTAGGGACAATGGTATGCATTTTA 59.382 33.333 3.54 0.00 0.00 1.52
346 393 8.546083 TTAGGGACAATGGTATGCATTTTATT 57.454 30.769 3.54 0.17 0.00 1.40
347 394 7.436320 AGGGACAATGGTATGCATTTTATTT 57.564 32.000 3.54 0.00 0.00 1.40
348 395 7.500141 AGGGACAATGGTATGCATTTTATTTC 58.500 34.615 3.54 4.46 0.00 2.17
349 396 7.345392 AGGGACAATGGTATGCATTTTATTTCT 59.655 33.333 3.54 0.00 0.00 2.52
351 398 8.819974 GGACAATGGTATGCATTTTATTTCTTG 58.180 33.333 3.54 1.71 0.00 3.02
352 399 9.369904 GACAATGGTATGCATTTTATTTCTTGT 57.630 29.630 3.54 4.86 0.00 3.16
357 404 7.605691 TGGTATGCATTTTATTTCTTGTTTGGG 59.394 33.333 3.54 0.00 0.00 4.12
359 406 7.671495 ATGCATTTTATTTCTTGTTTGGGTC 57.329 32.000 0.00 0.00 0.00 4.46
363 410 9.267084 GCATTTTATTTCTTGTTTGGGTCTTTA 57.733 29.630 0.00 0.00 0.00 1.85
379 426 9.747898 TTGGGTCTTTAGTATATTCATTTGTGT 57.252 29.630 0.00 0.00 0.00 3.72
381 428 9.391006 GGGTCTTTAGTATATTCATTTGTGTCA 57.609 33.333 0.00 0.00 0.00 3.58
388 435 8.498054 AGTATATTCATTTGTGTCACTTGAGG 57.502 34.615 4.27 0.00 0.00 3.86
389 436 8.103305 AGTATATTCATTTGTGTCACTTGAGGT 58.897 33.333 4.27 1.88 0.00 3.85
390 437 4.898829 TTCATTTGTGTCACTTGAGGTG 57.101 40.909 4.27 0.00 46.60 4.00
394 441 4.433186 TTTGTGTCACTTGAGGTGTTTG 57.567 40.909 4.27 0.00 45.50 2.93
395 442 3.066291 TGTGTCACTTGAGGTGTTTGT 57.934 42.857 4.27 0.00 45.50 2.83
396 443 3.006940 TGTGTCACTTGAGGTGTTTGTC 58.993 45.455 4.27 0.00 45.50 3.18
398 445 3.063997 GTGTCACTTGAGGTGTTTGTCAG 59.936 47.826 0.00 0.00 45.50 3.51
399 446 3.055458 TGTCACTTGAGGTGTTTGTCAGA 60.055 43.478 0.00 0.00 45.50 3.27
400 447 4.130118 GTCACTTGAGGTGTTTGTCAGAT 58.870 43.478 0.00 0.00 45.50 2.90
402 449 5.934625 GTCACTTGAGGTGTTTGTCAGATAT 59.065 40.000 0.00 0.00 45.50 1.63
403 450 5.934043 TCACTTGAGGTGTTTGTCAGATATG 59.066 40.000 0.00 0.00 45.50 1.78
404 451 5.702670 CACTTGAGGTGTTTGTCAGATATGT 59.297 40.000 0.00 0.00 40.79 2.29
406 453 6.205464 ACTTGAGGTGTTTGTCAGATATGTTG 59.795 38.462 0.00 0.00 0.00 3.33
407 454 5.863965 TGAGGTGTTTGTCAGATATGTTGA 58.136 37.500 0.00 0.00 0.00 3.18
409 456 6.770303 TGAGGTGTTTGTCAGATATGTTGAAA 59.230 34.615 0.00 0.00 0.00 2.69
411 458 6.207417 AGGTGTTTGTCAGATATGTTGAAAGG 59.793 38.462 0.00 0.00 0.00 3.11
412 459 6.206634 GGTGTTTGTCAGATATGTTGAAAGGA 59.793 38.462 0.00 0.00 0.00 3.36
413 460 7.078228 GTGTTTGTCAGATATGTTGAAAGGAC 58.922 38.462 0.00 0.00 0.00 3.85
414 461 6.206634 TGTTTGTCAGATATGTTGAAAGGACC 59.793 38.462 0.00 0.00 0.00 4.46
415 462 4.843728 TGTCAGATATGTTGAAAGGACCC 58.156 43.478 0.00 0.00 0.00 4.46
416 463 3.871594 GTCAGATATGTTGAAAGGACCCG 59.128 47.826 0.00 0.00 0.00 5.28
417 464 2.614057 CAGATATGTTGAAAGGACCCGC 59.386 50.000 0.00 0.00 0.00 6.13
418 465 2.238646 AGATATGTTGAAAGGACCCGCA 59.761 45.455 0.00 0.00 0.00 5.69
419 466 2.570415 TATGTTGAAAGGACCCGCAA 57.430 45.000 0.00 0.00 0.00 4.85
422 469 1.611491 TGTTGAAAGGACCCGCAAATC 59.389 47.619 0.00 0.00 0.00 2.17
423 470 1.611491 GTTGAAAGGACCCGCAAATCA 59.389 47.619 0.00 0.00 0.00 2.57
424 471 1.988293 TGAAAGGACCCGCAAATCAA 58.012 45.000 0.00 0.00 0.00 2.57
425 472 1.611491 TGAAAGGACCCGCAAATCAAC 59.389 47.619 0.00 0.00 0.00 3.18
426 473 1.611491 GAAAGGACCCGCAAATCAACA 59.389 47.619 0.00 0.00 0.00 3.33
428 475 1.176527 AGGACCCGCAAATCAACATG 58.823 50.000 0.00 0.00 0.00 3.21
429 476 0.887933 GGACCCGCAAATCAACATGT 59.112 50.000 0.00 0.00 0.00 3.21
430 477 1.402720 GGACCCGCAAATCAACATGTG 60.403 52.381 0.00 0.00 0.00 3.21
431 478 0.602562 ACCCGCAAATCAACATGTGG 59.397 50.000 0.00 0.00 44.88 4.17
433 480 1.000731 CCCGCAAATCAACATGTGGTT 59.999 47.619 0.00 0.00 44.01 3.67
444 491 4.380843 AACATGTGGTTGGATGGTTAGA 57.619 40.909 0.00 0.00 38.60 2.10
445 492 3.955471 ACATGTGGTTGGATGGTTAGAG 58.045 45.455 0.00 0.00 0.00 2.43
446 493 3.282021 CATGTGGTTGGATGGTTAGAGG 58.718 50.000 0.00 0.00 0.00 3.69
447 494 1.633432 TGTGGTTGGATGGTTAGAGGG 59.367 52.381 0.00 0.00 0.00 4.30
449 496 1.913419 TGGTTGGATGGTTAGAGGGAC 59.087 52.381 0.00 0.00 0.00 4.46
452 499 2.572104 GTTGGATGGTTAGAGGGACTGT 59.428 50.000 0.00 0.00 41.55 3.55
453 500 2.187958 TGGATGGTTAGAGGGACTGTG 58.812 52.381 0.00 0.00 41.55 3.66
454 501 1.486726 GGATGGTTAGAGGGACTGTGG 59.513 57.143 0.00 0.00 41.55 4.17
456 503 3.371965 GATGGTTAGAGGGACTGTGGTA 58.628 50.000 0.00 0.00 41.55 3.25
458 505 3.371965 TGGTTAGAGGGACTGTGGTATC 58.628 50.000 0.00 0.00 41.55 2.24
460 507 3.637694 GGTTAGAGGGACTGTGGTATCTC 59.362 52.174 0.00 0.00 41.55 2.75
461 508 2.463047 AGAGGGACTGTGGTATCTCC 57.537 55.000 0.00 0.00 41.55 3.71
462 509 1.646447 AGAGGGACTGTGGTATCTCCA 59.354 52.381 0.00 0.00 41.55 3.86
463 510 2.035632 GAGGGACTGTGGTATCTCCAG 58.964 57.143 0.00 0.00 44.13 3.86
464 511 3.859808 GAGGGACTGTGGTATCTCCAGC 61.860 59.091 0.00 0.00 44.13 4.85
471 518 1.427809 TGGTATCTCCAGCCCATCAG 58.572 55.000 0.00 0.00 41.93 2.90
472 519 0.689623 GGTATCTCCAGCCCATCAGG 59.310 60.000 0.00 0.00 35.73 3.86
473 520 2.727343 GGTATCTCCAGCCCATCAGGG 61.727 61.905 0.00 0.00 46.68 4.45
489 536 0.779997 AGGGTTCAAATCCTGGTGCT 59.220 50.000 0.00 0.00 38.36 4.40
490 537 1.177401 GGGTTCAAATCCTGGTGCTC 58.823 55.000 0.00 0.00 0.00 4.26
491 538 0.804989 GGTTCAAATCCTGGTGCTCG 59.195 55.000 0.00 0.00 0.00 5.03
494 541 0.035152 TCAAATCCTGGTGCTCGCAT 60.035 50.000 0.00 0.00 0.00 4.73
495 542 0.813184 CAAATCCTGGTGCTCGCATT 59.187 50.000 0.00 0.00 0.00 3.56
496 543 1.203052 CAAATCCTGGTGCTCGCATTT 59.797 47.619 0.00 0.00 0.00 2.32
497 544 2.418368 AATCCTGGTGCTCGCATTTA 57.582 45.000 0.00 0.00 0.00 1.40
498 545 2.645838 ATCCTGGTGCTCGCATTTAT 57.354 45.000 0.00 0.00 0.00 1.40
499 546 2.418368 TCCTGGTGCTCGCATTTATT 57.582 45.000 0.00 0.00 0.00 1.40
501 548 1.334869 CCTGGTGCTCGCATTTATTCC 59.665 52.381 0.00 0.00 0.00 3.01
502 549 2.292267 CTGGTGCTCGCATTTATTCCT 58.708 47.619 0.00 0.00 0.00 3.36
503 550 2.016318 TGGTGCTCGCATTTATTCCTG 58.984 47.619 0.00 0.00 0.00 3.86
504 551 2.288666 GGTGCTCGCATTTATTCCTGA 58.711 47.619 0.00 0.00 0.00 3.86
505 552 2.682856 GGTGCTCGCATTTATTCCTGAA 59.317 45.455 0.00 0.00 0.00 3.02
506 553 3.316308 GGTGCTCGCATTTATTCCTGAAT 59.684 43.478 0.00 0.00 34.93 2.57
507 554 4.202050 GGTGCTCGCATTTATTCCTGAATT 60.202 41.667 0.00 0.00 32.50 2.17
509 556 6.459573 GGTGCTCGCATTTATTCCTGAATTTA 60.460 38.462 0.00 0.00 32.50 1.40
510 557 7.141363 GTGCTCGCATTTATTCCTGAATTTAT 58.859 34.615 0.00 0.00 32.50 1.40
511 558 7.649306 GTGCTCGCATTTATTCCTGAATTTATT 59.351 33.333 0.00 0.00 32.50 1.40
526 573 9.065871 CCTGAATTTATTTTAGAACTTTCAGCG 57.934 33.333 0.00 0.00 38.19 5.18
527 574 9.825972 CTGAATTTATTTTAGAACTTTCAGCGA 57.174 29.630 0.00 0.00 34.40 4.93
530 577 8.620533 ATTTATTTTAGAACTTTCAGCGATGC 57.379 30.769 0.00 0.00 0.00 3.91
531 578 3.722555 TTTAGAACTTTCAGCGATGCG 57.277 42.857 0.00 0.00 0.00 4.73
542 589 2.711311 CGATGCGCATTCAGTGGG 59.289 61.111 26.12 4.47 43.21 4.61
543 590 1.815003 CGATGCGCATTCAGTGGGA 60.815 57.895 26.12 0.00 43.02 4.37
544 591 1.769098 CGATGCGCATTCAGTGGGAG 61.769 60.000 26.12 4.12 43.02 4.30
545 592 1.442526 GATGCGCATTCAGTGGGAGG 61.443 60.000 26.12 0.00 43.02 4.30
546 593 1.913951 ATGCGCATTCAGTGGGAGGA 61.914 55.000 19.28 0.00 43.02 3.71
547 594 1.817099 GCGCATTCAGTGGGAGGAG 60.817 63.158 0.30 0.00 43.02 3.69
548 595 1.900351 CGCATTCAGTGGGAGGAGA 59.100 57.895 0.00 0.00 43.02 3.71
549 596 0.460987 CGCATTCAGTGGGAGGAGAC 60.461 60.000 0.00 0.00 43.02 3.36
550 597 0.460987 GCATTCAGTGGGAGGAGACG 60.461 60.000 0.00 0.00 0.00 4.18
551 598 0.898320 CATTCAGTGGGAGGAGACGT 59.102 55.000 0.00 0.00 0.00 4.34
552 599 1.276421 CATTCAGTGGGAGGAGACGTT 59.724 52.381 0.00 0.00 0.00 3.99
553 600 0.966920 TTCAGTGGGAGGAGACGTTC 59.033 55.000 0.00 0.00 0.00 3.95
567 614 2.268730 ACGTTCCCGTCGTAAATCTC 57.731 50.000 0.00 0.00 46.28 2.75
568 615 1.541147 ACGTTCCCGTCGTAAATCTCA 59.459 47.619 0.00 0.00 46.28 3.27
569 616 2.030007 ACGTTCCCGTCGTAAATCTCAA 60.030 45.455 0.00 0.00 46.28 3.02
570 617 2.597305 CGTTCCCGTCGTAAATCTCAAG 59.403 50.000 0.00 0.00 0.00 3.02
571 618 3.671433 CGTTCCCGTCGTAAATCTCAAGA 60.671 47.826 0.00 0.00 0.00 3.02
572 619 4.430908 GTTCCCGTCGTAAATCTCAAGAT 58.569 43.478 0.00 0.00 36.07 2.40
573 620 4.041740 TCCCGTCGTAAATCTCAAGATG 57.958 45.455 0.00 0.00 34.49 2.90
574 621 3.697542 TCCCGTCGTAAATCTCAAGATGA 59.302 43.478 0.00 0.00 34.49 2.92
575 622 4.341235 TCCCGTCGTAAATCTCAAGATGAT 59.659 41.667 0.00 0.00 34.49 2.45
576 623 5.533528 TCCCGTCGTAAATCTCAAGATGATA 59.466 40.000 0.00 0.00 34.49 2.15
577 624 6.208797 TCCCGTCGTAAATCTCAAGATGATAT 59.791 38.462 0.00 0.00 34.49 1.63
578 625 6.309009 CCCGTCGTAAATCTCAAGATGATATG 59.691 42.308 0.00 0.00 34.49 1.78
579 626 6.183360 CCGTCGTAAATCTCAAGATGATATGC 60.183 42.308 0.00 0.00 34.49 3.14
580 627 6.183360 CGTCGTAAATCTCAAGATGATATGCC 60.183 42.308 0.00 0.00 34.49 4.40
581 628 5.863935 TCGTAAATCTCAAGATGATATGCCG 59.136 40.000 0.00 0.00 34.49 5.69
582 629 5.863935 CGTAAATCTCAAGATGATATGCCGA 59.136 40.000 0.00 0.00 34.49 5.54
583 630 6.183360 CGTAAATCTCAAGATGATATGCCGAC 60.183 42.308 0.00 0.00 34.49 4.79
584 631 5.480642 AATCTCAAGATGATATGCCGACT 57.519 39.130 0.00 0.00 34.49 4.18
585 632 4.511617 TCTCAAGATGATATGCCGACTC 57.488 45.455 0.00 0.00 0.00 3.36
586 633 3.891366 TCTCAAGATGATATGCCGACTCA 59.109 43.478 0.00 0.00 0.00 3.41
587 634 4.022503 TCTCAAGATGATATGCCGACTCAG 60.023 45.833 0.00 0.00 0.00 3.35
588 635 3.638627 TCAAGATGATATGCCGACTCAGT 59.361 43.478 0.00 0.00 0.00 3.41
589 636 3.932545 AGATGATATGCCGACTCAGTC 57.067 47.619 0.00 0.00 0.00 3.51
590 637 3.495331 AGATGATATGCCGACTCAGTCT 58.505 45.455 2.61 0.00 0.00 3.24
591 638 3.894427 AGATGATATGCCGACTCAGTCTT 59.106 43.478 2.61 0.00 0.00 3.01
592 639 4.343526 AGATGATATGCCGACTCAGTCTTT 59.656 41.667 2.61 0.00 0.00 2.52
593 640 4.046938 TGATATGCCGACTCAGTCTTTC 57.953 45.455 2.61 0.00 0.00 2.62
594 641 2.561733 TATGCCGACTCAGTCTTTCG 57.438 50.000 2.61 0.00 0.00 3.46
600 647 2.791567 CGACTCAGTCTTTCGGAGATG 58.208 52.381 2.61 0.00 40.01 2.90
601 648 2.535331 GACTCAGTCTTTCGGAGATGC 58.465 52.381 0.00 0.00 40.01 3.91
602 649 2.165437 GACTCAGTCTTTCGGAGATGCT 59.835 50.000 0.00 0.00 40.01 3.79
603 650 2.165437 ACTCAGTCTTTCGGAGATGCTC 59.835 50.000 0.00 0.00 40.01 4.26
604 651 2.165234 CTCAGTCTTTCGGAGATGCTCA 59.835 50.000 0.00 0.00 40.01 4.26
605 652 2.762887 TCAGTCTTTCGGAGATGCTCAT 59.237 45.455 0.00 0.00 36.61 2.90
606 653 3.954258 TCAGTCTTTCGGAGATGCTCATA 59.046 43.478 0.00 0.00 36.61 2.15
607 654 4.037327 TCAGTCTTTCGGAGATGCTCATAG 59.963 45.833 0.00 0.00 36.61 2.23
608 655 3.320541 AGTCTTTCGGAGATGCTCATAGG 59.679 47.826 0.00 0.00 36.61 2.57
609 656 2.630098 TCTTTCGGAGATGCTCATAGGG 59.370 50.000 0.00 0.00 35.04 3.53
610 657 1.342074 TTCGGAGATGCTCATAGGGG 58.658 55.000 0.00 0.00 35.04 4.79
611 658 0.188587 TCGGAGATGCTCATAGGGGT 59.811 55.000 0.00 0.00 31.08 4.95
612 659 1.427753 TCGGAGATGCTCATAGGGGTA 59.572 52.381 0.00 0.00 31.08 3.69
613 660 1.821753 CGGAGATGCTCATAGGGGTAG 59.178 57.143 0.00 0.00 31.08 3.18
614 661 2.183679 GGAGATGCTCATAGGGGTAGG 58.816 57.143 0.00 0.00 31.08 3.18
615 662 2.183679 GAGATGCTCATAGGGGTAGGG 58.816 57.143 0.00 0.00 0.00 3.53
616 663 1.509961 AGATGCTCATAGGGGTAGGGT 59.490 52.381 0.00 0.00 0.00 4.34
617 664 1.625818 GATGCTCATAGGGGTAGGGTG 59.374 57.143 0.00 0.00 0.00 4.61
618 665 0.341961 TGCTCATAGGGGTAGGGTGT 59.658 55.000 0.00 0.00 0.00 4.16
619 666 0.759346 GCTCATAGGGGTAGGGTGTG 59.241 60.000 0.00 0.00 0.00 3.82
620 667 0.759346 CTCATAGGGGTAGGGTGTGC 59.241 60.000 0.00 0.00 0.00 4.57
621 668 1.046472 TCATAGGGGTAGGGTGTGCG 61.046 60.000 0.00 0.00 0.00 5.34
622 669 1.002533 ATAGGGGTAGGGTGTGCGT 59.997 57.895 0.00 0.00 0.00 5.24
623 670 1.335132 ATAGGGGTAGGGTGTGCGTG 61.335 60.000 0.00 0.00 0.00 5.34
624 671 2.735151 TAGGGGTAGGGTGTGCGTGT 62.735 60.000 0.00 0.00 0.00 4.49
625 672 2.358247 GGGTAGGGTGTGCGTGTG 60.358 66.667 0.00 0.00 0.00 3.82
626 673 2.424302 GGTAGGGTGTGCGTGTGT 59.576 61.111 0.00 0.00 0.00 3.72
627 674 1.959226 GGTAGGGTGTGCGTGTGTG 60.959 63.158 0.00 0.00 0.00 3.82
628 675 2.280524 TAGGGTGTGCGTGTGTGC 60.281 61.111 0.00 0.00 0.00 4.57
631 678 3.871574 GGTGTGCGTGTGTGCGTT 61.872 61.111 0.00 0.00 37.81 4.84
632 679 2.350760 GTGTGCGTGTGTGCGTTC 60.351 61.111 0.00 0.00 37.81 3.95
633 680 2.815647 TGTGCGTGTGTGCGTTCA 60.816 55.556 0.00 0.00 37.81 3.18
634 681 2.176926 TGTGCGTGTGTGCGTTCAT 61.177 52.632 0.00 0.00 37.81 2.57
635 682 0.876342 TGTGCGTGTGTGCGTTCATA 60.876 50.000 0.00 0.00 37.81 2.15
636 683 0.179250 GTGCGTGTGTGCGTTCATAG 60.179 55.000 0.00 0.00 37.81 2.23
637 684 0.319125 TGCGTGTGTGCGTTCATAGA 60.319 50.000 0.00 0.00 37.81 1.98
638 685 0.366871 GCGTGTGTGCGTTCATAGAG 59.633 55.000 0.00 0.00 0.00 2.43
639 686 0.992072 CGTGTGTGCGTTCATAGAGG 59.008 55.000 0.00 0.00 0.00 3.69
640 687 1.668919 CGTGTGTGCGTTCATAGAGGT 60.669 52.381 0.00 0.00 0.00 3.85
641 688 1.726791 GTGTGTGCGTTCATAGAGGTG 59.273 52.381 0.00 0.00 0.00 4.00
642 689 1.616374 TGTGTGCGTTCATAGAGGTGA 59.384 47.619 0.00 0.00 0.00 4.02
643 690 2.263077 GTGTGCGTTCATAGAGGTGAG 58.737 52.381 0.00 0.00 0.00 3.51
658 705 2.823747 AGGTGAGTTCTATGCACGTGTA 59.176 45.455 18.38 14.09 33.48 2.90
660 707 4.643334 AGGTGAGTTCTATGCACGTGTATA 59.357 41.667 22.52 22.52 33.48 1.47
673 720 1.625616 GTGTATACGAGCGCTTGTGT 58.374 50.000 35.42 31.28 0.00 3.72
674 721 1.582502 GTGTATACGAGCGCTTGTGTC 59.417 52.381 35.42 24.63 0.00 3.67
676 723 1.846782 GTATACGAGCGCTTGTGTCTG 59.153 52.381 35.42 11.99 0.00 3.51
677 724 0.243907 ATACGAGCGCTTGTGTCTGT 59.756 50.000 35.42 13.86 0.00 3.41
679 726 0.663568 ACGAGCGCTTGTGTCTGTAC 60.664 55.000 29.30 2.12 0.00 2.90
680 727 1.344942 CGAGCGCTTGTGTCTGTACC 61.345 60.000 13.26 0.00 0.00 3.34
681 728 1.344942 GAGCGCTTGTGTCTGTACCG 61.345 60.000 13.26 0.00 0.00 4.02
682 729 1.372499 GCGCTTGTGTCTGTACCGA 60.372 57.895 0.00 0.00 0.00 4.69
683 730 0.736325 GCGCTTGTGTCTGTACCGAT 60.736 55.000 0.00 0.00 0.00 4.18
684 731 0.992072 CGCTTGTGTCTGTACCGATG 59.008 55.000 0.00 0.00 0.00 3.84
685 732 1.668919 CGCTTGTGTCTGTACCGATGT 60.669 52.381 0.00 0.00 0.00 3.06
686 733 2.413837 GCTTGTGTCTGTACCGATGTT 58.586 47.619 0.00 0.00 0.00 2.71
687 734 3.581755 GCTTGTGTCTGTACCGATGTTA 58.418 45.455 0.00 0.00 0.00 2.41
690 737 5.049954 GCTTGTGTCTGTACCGATGTTAAAA 60.050 40.000 0.00 0.00 0.00 1.52
691 738 6.512091 GCTTGTGTCTGTACCGATGTTAAAAA 60.512 38.462 0.00 0.00 0.00 1.94
713 760 4.385358 AAATATGTTGAAATGACCCGCC 57.615 40.909 0.00 0.00 0.00 6.13
714 761 2.498644 TATGTTGAAATGACCCGCCA 57.501 45.000 0.00 0.00 0.00 5.69
715 762 0.887933 ATGTTGAAATGACCCGCCAC 59.112 50.000 0.00 0.00 0.00 5.01
716 763 0.179004 TGTTGAAATGACCCGCCACT 60.179 50.000 0.00 0.00 0.00 4.00
717 764 0.240945 GTTGAAATGACCCGCCACTG 59.759 55.000 0.00 0.00 0.00 3.66
718 765 0.179004 TTGAAATGACCCGCCACTGT 60.179 50.000 0.00 0.00 0.00 3.55
720 767 0.958822 GAAATGACCCGCCACTGTTT 59.041 50.000 0.00 0.00 0.00 2.83
721 768 1.339929 GAAATGACCCGCCACTGTTTT 59.660 47.619 0.00 0.00 0.00 2.43
722 769 1.408969 AATGACCCGCCACTGTTTTT 58.591 45.000 0.00 0.00 0.00 1.94
743 790 4.666928 TTTTTAAATGAGGACGTACCGC 57.333 40.909 0.00 0.00 44.74 5.68
1172 1646 1.725931 GCTCTTCACCGCGTTGAATTG 60.726 52.381 19.68 15.23 34.96 2.32
1209 1683 3.067106 ACCTTGTAGTCAACTGATTGCG 58.933 45.455 0.00 0.00 35.63 4.85
1349 2099 9.020731 TGATTCATCTCAGTTACACTTGTACTA 57.979 33.333 0.00 0.00 0.00 1.82
1409 2169 8.860088 ACTTAAAATAGAGGTGTTTGCAAGATT 58.140 29.630 0.00 0.00 0.00 2.40
1410 2170 9.346725 CTTAAAATAGAGGTGTTTGCAAGATTC 57.653 33.333 0.00 0.00 0.00 2.52
1411 2171 6.899393 AAATAGAGGTGTTTGCAAGATTCA 57.101 33.333 0.00 0.00 0.00 2.57
1412 2172 5.886960 ATAGAGGTGTTTGCAAGATTCAC 57.113 39.130 0.00 8.19 0.00 3.18
1413 2173 3.825328 AGAGGTGTTTGCAAGATTCACT 58.175 40.909 18.20 7.69 0.00 3.41
1414 2174 3.567164 AGAGGTGTTTGCAAGATTCACTG 59.433 43.478 18.20 0.00 0.00 3.66
1415 2175 2.035066 AGGTGTTTGCAAGATTCACTGC 59.965 45.455 18.20 4.31 0.00 4.40
1416 2176 2.035066 GGTGTTTGCAAGATTCACTGCT 59.965 45.455 18.20 0.00 0.00 4.24
1417 2177 3.491447 GGTGTTTGCAAGATTCACTGCTT 60.491 43.478 18.20 0.00 0.00 3.91
1418 2178 3.488310 GTGTTTGCAAGATTCACTGCTTG 59.512 43.478 0.00 0.00 43.26 4.01
1419 2179 3.130869 TGTTTGCAAGATTCACTGCTTGT 59.869 39.130 0.00 0.00 42.57 3.16
1421 2181 1.001048 TGCAAGATTCACTGCTTGTGC 60.001 47.619 10.85 0.00 45.81 4.57
1422 2182 1.268899 GCAAGATTCACTGCTTGTGCT 59.731 47.619 0.00 0.00 45.81 4.40
1423 2183 2.921069 GCAAGATTCACTGCTTGTGCTG 60.921 50.000 0.00 0.00 45.81 4.41
1424 2184 1.531423 AGATTCACTGCTTGTGCTGG 58.469 50.000 5.71 0.00 45.81 4.85
1425 2185 0.524862 GATTCACTGCTTGTGCTGGG 59.475 55.000 5.71 0.00 45.81 4.45
1426 2186 0.178981 ATTCACTGCTTGTGCTGGGT 60.179 50.000 5.71 0.00 45.81 4.51
1427 2187 0.819259 TTCACTGCTTGTGCTGGGTC 60.819 55.000 5.71 0.00 45.81 4.46
1428 2188 2.281070 ACTGCTTGTGCTGGGTCG 60.281 61.111 0.00 0.00 41.57 4.79
1429 2189 3.730761 CTGCTTGTGCTGGGTCGC 61.731 66.667 0.00 0.00 40.48 5.19
1430 2190 4.560743 TGCTTGTGCTGGGTCGCA 62.561 61.111 0.00 0.00 40.48 5.10
1431 2191 3.730761 GCTTGTGCTGGGTCGCAG 61.731 66.667 12.42 12.42 41.21 5.18
1432 2192 3.052082 CTTGTGCTGGGTCGCAGG 61.052 66.667 17.75 1.18 41.21 4.85
1433 2193 3.535629 CTTGTGCTGGGTCGCAGGA 62.536 63.158 17.75 12.81 41.21 3.86
1434 2194 3.535629 TTGTGCTGGGTCGCAGGAG 62.536 63.158 17.75 0.00 41.21 3.69
1444 2204 0.735632 GTCGCAGGAGCACTTCAGAG 60.736 60.000 0.00 0.00 42.27 3.35
1484 2246 5.121454 GCTAGATTTATTTCCAGATGCTCCG 59.879 44.000 0.00 0.00 0.00 4.63
1488 2250 4.764050 TTATTTCCAGATGCTCCGGTTA 57.236 40.909 0.00 0.00 0.00 2.85
1508 2270 6.980978 CGGTTACACTGATCACTCTTGATATT 59.019 38.462 0.00 0.00 42.95 1.28
1546 2332 1.094785 CTAAATCCCGTTGTGGCCAG 58.905 55.000 5.11 0.00 35.87 4.85
1557 2343 3.374058 CGTTGTGGCCAGACCTTTTATAG 59.626 47.826 5.11 0.00 40.22 1.31
1682 3177 8.659925 TGTTTTGTGAATGCTTTACATCATTT 57.340 26.923 0.00 0.00 38.34 2.32
1748 3250 3.822735 TCAGTCAGGCTTTCTTGAAATGG 59.177 43.478 0.00 0.00 0.00 3.16
1931 4821 5.249852 TGGAAGGTTATTGCTGTAGGTAAGT 59.750 40.000 0.00 0.00 0.00 2.24
1932 4822 6.441284 TGGAAGGTTATTGCTGTAGGTAAGTA 59.559 38.462 0.00 0.00 0.00 2.24
1943 4833 8.086143 TGCTGTAGGTAAGTAATAAATCAGGT 57.914 34.615 0.00 0.00 0.00 4.00
1968 4858 9.774742 GTTATTGATGTTAATTGTCCTTCTCAC 57.225 33.333 0.00 0.00 0.00 3.51
1972 4862 4.385825 TGTTAATTGTCCTTCTCACGCTT 58.614 39.130 0.00 0.00 0.00 4.68
1979 4869 2.224314 GTCCTTCTCACGCTTTTTCCAG 59.776 50.000 0.00 0.00 0.00 3.86
1980 4870 2.158813 TCCTTCTCACGCTTTTTCCAGT 60.159 45.455 0.00 0.00 0.00 4.00
1981 4871 2.031682 CCTTCTCACGCTTTTTCCAGTG 60.032 50.000 0.00 0.00 36.06 3.66
1985 4875 0.040067 CACGCTTTTTCCAGTGAGCC 60.040 55.000 0.00 0.00 36.79 4.70
1986 4876 0.465460 ACGCTTTTTCCAGTGAGCCA 60.465 50.000 0.00 0.00 0.00 4.75
1990 4880 3.732212 GCTTTTTCCAGTGAGCCATTTT 58.268 40.909 0.00 0.00 0.00 1.82
1992 4882 4.740334 GCTTTTTCCAGTGAGCCATTTTGA 60.740 41.667 0.00 0.00 0.00 2.69
1993 4883 5.350504 TTTTTCCAGTGAGCCATTTTGAA 57.649 34.783 0.00 0.00 0.00 2.69
1994 4884 4.320608 TTTCCAGTGAGCCATTTTGAAC 57.679 40.909 0.00 0.00 0.00 3.18
2000 4890 4.394300 CAGTGAGCCATTTTGAACTAGGAG 59.606 45.833 0.00 0.00 0.00 3.69
2022 4912 6.505048 AGTTCATCCATGATATGTCTTCCA 57.495 37.500 0.00 0.00 36.56 3.53
2027 4917 7.976712 TCATCCATGATATGTCTTCCATGTAA 58.023 34.615 0.00 0.00 35.79 2.41
2029 4919 7.379059 TCCATGATATGTCTTCCATGTAACT 57.621 36.000 0.00 0.00 35.79 2.24
2031 4921 7.290948 TCCATGATATGTCTTCCATGTAACTCT 59.709 37.037 0.00 0.00 35.79 3.24
2043 4933 5.178623 TCCATGTAACTCTTGCTGTTTTACG 59.821 40.000 0.00 0.00 0.00 3.18
2068 4958 7.331193 CGTATTGGAAGGAGGTGCTAATATTAC 59.669 40.741 0.00 0.00 0.00 1.89
2070 4960 4.039973 TGGAAGGAGGTGCTAATATTACCG 59.960 45.833 1.11 0.00 39.46 4.02
2090 4980 4.348168 ACCGTTGAGGGCTATTGATATTCT 59.652 41.667 0.00 0.00 46.96 2.40
2095 4985 7.095439 CGTTGAGGGCTATTGATATTCTTTCTC 60.095 40.741 0.00 0.00 0.00 2.87
2232 5122 8.948631 TCATGTCTACTTGGTCATATTTCTTC 57.051 34.615 0.00 0.00 0.00 2.87
2879 5783 1.825090 TGCTGGATCGTCTGCAAATT 58.175 45.000 1.91 0.00 38.36 1.82
3010 5914 5.886960 ATGACTTCATGGCTTTTGTACTC 57.113 39.130 0.00 0.00 34.83 2.59
3112 6016 8.397906 GCTGCATTGTTTTACTATCTACAATCA 58.602 33.333 0.00 0.00 38.71 2.57
3673 6579 3.250762 TCAATTTTGACACTCTTGAGGCG 59.749 43.478 2.55 0.00 31.01 5.52
3736 9672 5.230182 TGTGAACTACAGTGTGTGATGATC 58.770 41.667 5.88 0.00 33.42 2.92
3749 9685 6.149973 GTGTGTGATGATCCATCTTCAGAAAA 59.850 38.462 8.22 0.00 41.06 2.29
3810 9746 7.663081 GTGATGTAGGAATACATTGATCATGGT 59.337 37.037 0.00 0.17 40.45 3.55
4515 11486 3.963129 TGGCCTCGAGAAAAACCATATT 58.037 40.909 15.71 0.00 0.00 1.28
4581 11552 7.437748 CCACTATTGGGTGTTGAATTAACAAA 58.562 34.615 0.00 0.00 41.60 2.83
4721 11731 3.258872 ACTGGTTGCCGTACAAGTGTATA 59.741 43.478 0.00 0.00 39.50 1.47
4722 11732 4.247258 CTGGTTGCCGTACAAGTGTATAA 58.753 43.478 0.00 0.00 39.50 0.98
4723 11733 3.995705 TGGTTGCCGTACAAGTGTATAAC 59.004 43.478 0.00 0.03 39.50 1.89
4724 11734 3.371898 GGTTGCCGTACAAGTGTATAACC 59.628 47.826 10.99 10.99 39.50 2.85
4725 11735 3.957591 TGCCGTACAAGTGTATAACCA 57.042 42.857 0.00 0.00 32.54 3.67
4726 11736 4.475051 TGCCGTACAAGTGTATAACCAT 57.525 40.909 0.00 0.00 32.54 3.55
4727 11737 4.185394 TGCCGTACAAGTGTATAACCATG 58.815 43.478 0.00 0.00 32.54 3.66
4728 11738 3.001939 GCCGTACAAGTGTATAACCATGC 59.998 47.826 0.00 0.00 32.54 4.06
4729 11739 4.439057 CCGTACAAGTGTATAACCATGCT 58.561 43.478 0.00 0.00 32.54 3.79
4730 11740 5.593968 CCGTACAAGTGTATAACCATGCTA 58.406 41.667 0.00 0.00 32.54 3.49
4731 11741 6.044046 CCGTACAAGTGTATAACCATGCTAA 58.956 40.000 0.00 0.00 32.54 3.09
4732 11742 6.019318 CCGTACAAGTGTATAACCATGCTAAC 60.019 42.308 0.00 0.00 32.54 2.34
4733 11743 6.019318 CGTACAAGTGTATAACCATGCTAACC 60.019 42.308 0.00 0.00 32.54 2.85
4734 11744 6.062258 ACAAGTGTATAACCATGCTAACCT 57.938 37.500 0.00 0.00 0.00 3.50
4735 11745 6.113411 ACAAGTGTATAACCATGCTAACCTC 58.887 40.000 0.00 0.00 0.00 3.85
4736 11746 5.291905 AGTGTATAACCATGCTAACCTCC 57.708 43.478 0.00 0.00 0.00 4.30
4737 11747 4.969359 AGTGTATAACCATGCTAACCTCCT 59.031 41.667 0.00 0.00 0.00 3.69
4738 11748 5.070580 AGTGTATAACCATGCTAACCTCCTC 59.929 44.000 0.00 0.00 0.00 3.71
4739 11749 5.070580 GTGTATAACCATGCTAACCTCCTCT 59.929 44.000 0.00 0.00 0.00 3.69
4740 11750 4.965200 ATAACCATGCTAACCTCCTCTC 57.035 45.455 0.00 0.00 0.00 3.20
4741 11751 2.559381 ACCATGCTAACCTCCTCTCT 57.441 50.000 0.00 0.00 0.00 3.10
4742 11752 2.839228 ACCATGCTAACCTCCTCTCTT 58.161 47.619 0.00 0.00 0.00 2.85
4743 11753 3.185455 ACCATGCTAACCTCCTCTCTTT 58.815 45.455 0.00 0.00 0.00 2.52
4744 11754 3.589288 ACCATGCTAACCTCCTCTCTTTT 59.411 43.478 0.00 0.00 0.00 2.27
4745 11755 4.043435 ACCATGCTAACCTCCTCTCTTTTT 59.957 41.667 0.00 0.00 0.00 1.94
4746 11756 4.397417 CCATGCTAACCTCCTCTCTTTTTG 59.603 45.833 0.00 0.00 0.00 2.44
4747 11757 3.412386 TGCTAACCTCCTCTCTTTTTGC 58.588 45.455 0.00 0.00 0.00 3.68
4748 11758 3.073062 TGCTAACCTCCTCTCTTTTTGCT 59.927 43.478 0.00 0.00 0.00 3.91
4749 11759 3.687212 GCTAACCTCCTCTCTTTTTGCTC 59.313 47.826 0.00 0.00 0.00 4.26
4750 11760 4.564613 GCTAACCTCCTCTCTTTTTGCTCT 60.565 45.833 0.00 0.00 0.00 4.09
4751 11761 3.415457 ACCTCCTCTCTTTTTGCTCTG 57.585 47.619 0.00 0.00 0.00 3.35
4752 11762 2.708325 ACCTCCTCTCTTTTTGCTCTGT 59.292 45.455 0.00 0.00 0.00 3.41
4753 11763 3.072944 CCTCCTCTCTTTTTGCTCTGTG 58.927 50.000 0.00 0.00 0.00 3.66
4754 11764 3.495806 CCTCCTCTCTTTTTGCTCTGTGT 60.496 47.826 0.00 0.00 0.00 3.72
4755 11765 4.133078 CTCCTCTCTTTTTGCTCTGTGTT 58.867 43.478 0.00 0.00 0.00 3.32
4756 11766 3.879295 TCCTCTCTTTTTGCTCTGTGTTG 59.121 43.478 0.00 0.00 0.00 3.33
4757 11767 3.629398 CCTCTCTTTTTGCTCTGTGTTGT 59.371 43.478 0.00 0.00 0.00 3.32
4758 11768 4.816385 CCTCTCTTTTTGCTCTGTGTTGTA 59.184 41.667 0.00 0.00 0.00 2.41
4759 11769 5.471456 CCTCTCTTTTTGCTCTGTGTTGTAT 59.529 40.000 0.00 0.00 0.00 2.29
5275 12288 0.614979 TACCTGCTCTCCCTGTGTCC 60.615 60.000 0.00 0.00 0.00 4.02
5285 12298 2.358737 CTGTGTCCCGGCACCTTC 60.359 66.667 9.39 0.00 38.52 3.46
5315 12328 0.246635 TTTACTCTGCTCCCTGCGTC 59.753 55.000 0.00 0.00 46.63 5.19
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 1.649171 CGAACGAAGACAAGATCCACG 59.351 52.381 0.00 0.00 34.11 4.94
43 44 7.813148 CGTAGATCGAAAATATCCAACCTGTAT 59.187 37.037 0.00 0.00 42.86 2.29
49 50 6.142122 GAGCGTAGATCGAAAATATCCAAC 57.858 41.667 0.00 0.00 42.86 3.77
57 58 9.916987 GTCGAAGAAGAGAGCGTAGATCGAAAA 62.917 44.444 0.00 0.00 45.74 2.29
60 61 5.781551 GTCGAAGAAGAGAGCGTAGATCGA 61.782 50.000 0.00 0.00 45.74 3.59
61 62 3.602946 GTCGAAGAAGAGAGCGTAGATCG 60.603 52.174 0.00 0.00 45.74 3.69
78 80 0.922717 GAACAACAACCGTCGTCGAA 59.077 50.000 2.98 0.00 39.71 3.71
82 84 1.433837 GCCAGAACAACAACCGTCGT 61.434 55.000 0.00 0.00 0.00 4.34
89 91 1.723608 CCAGTGCGCCAGAACAACAA 61.724 55.000 4.18 0.00 0.00 2.83
101 103 2.505982 CCCCATAGGACCAGTGCG 59.494 66.667 0.00 0.00 38.24 5.34
117 119 1.458445 GAAAGTCGTCGTGTTAAGGCC 59.542 52.381 0.00 0.00 0.00 5.19
124 126 1.404391 ACAGTCAGAAAGTCGTCGTGT 59.596 47.619 0.00 0.00 0.00 4.49
136 138 4.581824 ACCTCGTTGTAGTAAACAGTCAGA 59.418 41.667 0.00 0.00 39.87 3.27
138 140 4.924305 ACCTCGTTGTAGTAAACAGTCA 57.076 40.909 0.00 0.00 39.87 3.41
141 143 4.319261 GGCAAACCTCGTTGTAGTAAACAG 60.319 45.833 0.00 0.00 39.87 3.16
145 147 2.769893 GGGCAAACCTCGTTGTAGTAA 58.230 47.619 0.00 0.00 35.85 2.24
157 159 4.796495 ATCGGAGCCGGGCAAACC 62.796 66.667 23.09 18.99 40.25 3.27
174 176 2.683933 GTCTTCGCCCCTCCCTCA 60.684 66.667 0.00 0.00 0.00 3.86
233 280 6.485313 TCATCAACTGTTAAGGTGGTACAAAG 59.515 38.462 0.00 0.00 44.16 2.77
241 288 9.166173 TCAATCTATTCATCAACTGTTAAGGTG 57.834 33.333 0.00 0.00 43.03 4.00
289 336 4.033817 CAGCTTCATCTTTCTTCATCGACC 59.966 45.833 0.00 0.00 0.00 4.79
290 337 4.033817 CCAGCTTCATCTTTCTTCATCGAC 59.966 45.833 0.00 0.00 0.00 4.20
292 339 4.186926 TCCAGCTTCATCTTTCTTCATCG 58.813 43.478 0.00 0.00 0.00 3.84
293 340 6.373774 TCTTTCCAGCTTCATCTTTCTTCATC 59.626 38.462 0.00 0.00 0.00 2.92
294 341 6.150809 GTCTTTCCAGCTTCATCTTTCTTCAT 59.849 38.462 0.00 0.00 0.00 2.57
295 342 5.471456 GTCTTTCCAGCTTCATCTTTCTTCA 59.529 40.000 0.00 0.00 0.00 3.02
296 343 5.704978 AGTCTTTCCAGCTTCATCTTTCTTC 59.295 40.000 0.00 0.00 0.00 2.87
298 345 5.240013 AGTCTTTCCAGCTTCATCTTTCT 57.760 39.130 0.00 0.00 0.00 2.52
299 346 5.956068 AAGTCTTTCCAGCTTCATCTTTC 57.044 39.130 0.00 0.00 0.00 2.62
300 347 6.432472 CCTAAAGTCTTTCCAGCTTCATCTTT 59.568 38.462 0.00 0.00 0.00 2.52
301 348 5.942826 CCTAAAGTCTTTCCAGCTTCATCTT 59.057 40.000 0.00 0.00 0.00 2.40
302 349 5.495640 CCTAAAGTCTTTCCAGCTTCATCT 58.504 41.667 0.00 0.00 0.00 2.90
303 350 4.637977 CCCTAAAGTCTTTCCAGCTTCATC 59.362 45.833 0.00 0.00 0.00 2.92
305 352 3.650942 TCCCTAAAGTCTTTCCAGCTTCA 59.349 43.478 0.00 0.00 0.00 3.02
306 353 4.004314 GTCCCTAAAGTCTTTCCAGCTTC 58.996 47.826 0.00 0.00 0.00 3.86
307 354 3.394606 TGTCCCTAAAGTCTTTCCAGCTT 59.605 43.478 0.00 0.00 0.00 3.74
308 355 2.979678 TGTCCCTAAAGTCTTTCCAGCT 59.020 45.455 0.00 0.00 0.00 4.24
309 356 3.418684 TGTCCCTAAAGTCTTTCCAGC 57.581 47.619 0.00 0.00 0.00 4.85
310 357 4.702131 CCATTGTCCCTAAAGTCTTTCCAG 59.298 45.833 0.00 0.00 0.00 3.86
311 358 4.105697 ACCATTGTCCCTAAAGTCTTTCCA 59.894 41.667 0.00 0.00 0.00 3.53
312 359 4.663334 ACCATTGTCCCTAAAGTCTTTCC 58.337 43.478 0.00 0.00 0.00 3.13
315 362 5.193679 GCATACCATTGTCCCTAAAGTCTT 58.806 41.667 0.00 0.00 0.00 3.01
316 363 4.227300 TGCATACCATTGTCCCTAAAGTCT 59.773 41.667 0.00 0.00 0.00 3.24
318 365 4.584638 TGCATACCATTGTCCCTAAAGT 57.415 40.909 0.00 0.00 0.00 2.66
319 366 6.469782 AAATGCATACCATTGTCCCTAAAG 57.530 37.500 0.00 0.00 43.22 1.85
320 367 6.865834 AAAATGCATACCATTGTCCCTAAA 57.134 33.333 0.00 0.00 43.22 1.85
322 369 8.546083 AAATAAAATGCATACCATTGTCCCTA 57.454 30.769 0.00 0.00 43.22 3.53
323 370 7.345392 AGAAATAAAATGCATACCATTGTCCCT 59.655 33.333 0.00 0.00 43.22 4.20
325 372 8.819974 CAAGAAATAAAATGCATACCATTGTCC 58.180 33.333 0.00 0.00 43.22 4.02
326 373 9.369904 ACAAGAAATAAAATGCATACCATTGTC 57.630 29.630 0.00 1.62 43.22 3.18
331 378 7.605691 CCCAAACAAGAAATAAAATGCATACCA 59.394 33.333 0.00 0.00 0.00 3.25
332 379 7.606073 ACCCAAACAAGAAATAAAATGCATACC 59.394 33.333 0.00 0.00 0.00 2.73
333 380 8.546597 ACCCAAACAAGAAATAAAATGCATAC 57.453 30.769 0.00 0.00 0.00 2.39
334 381 8.592809 AGACCCAAACAAGAAATAAAATGCATA 58.407 29.630 0.00 0.00 0.00 3.14
335 382 7.452562 AGACCCAAACAAGAAATAAAATGCAT 58.547 30.769 0.00 0.00 0.00 3.96
337 384 7.728847 AAGACCCAAACAAGAAATAAAATGC 57.271 32.000 0.00 0.00 0.00 3.56
363 410 8.103305 ACCTCAAGTGACACAAATGAATATACT 58.897 33.333 8.59 0.00 0.00 2.12
364 411 8.268850 ACCTCAAGTGACACAAATGAATATAC 57.731 34.615 8.59 0.00 0.00 1.47
381 428 5.869579 ACATATCTGACAAACACCTCAAGT 58.130 37.500 0.00 0.00 0.00 3.16
382 429 6.427853 TCAACATATCTGACAAACACCTCAAG 59.572 38.462 0.00 0.00 0.00 3.02
383 430 6.295249 TCAACATATCTGACAAACACCTCAA 58.705 36.000 0.00 0.00 0.00 3.02
387 434 6.206634 TCCTTTCAACATATCTGACAAACACC 59.793 38.462 0.00 0.00 0.00 4.16
388 435 7.078228 GTCCTTTCAACATATCTGACAAACAC 58.922 38.462 0.00 0.00 0.00 3.32
389 436 6.206634 GGTCCTTTCAACATATCTGACAAACA 59.793 38.462 0.00 0.00 0.00 2.83
390 437 6.349363 GGGTCCTTTCAACATATCTGACAAAC 60.349 42.308 0.00 0.00 0.00 2.93
394 441 3.871594 CGGGTCCTTTCAACATATCTGAC 59.128 47.826 0.00 0.00 0.00 3.51
395 442 3.681594 GCGGGTCCTTTCAACATATCTGA 60.682 47.826 0.00 0.00 0.00 3.27
396 443 2.614057 GCGGGTCCTTTCAACATATCTG 59.386 50.000 0.00 0.00 0.00 2.90
398 445 2.639065 TGCGGGTCCTTTCAACATATC 58.361 47.619 0.00 0.00 0.00 1.63
399 446 2.799126 TGCGGGTCCTTTCAACATAT 57.201 45.000 0.00 0.00 0.00 1.78
400 447 2.570415 TTGCGGGTCCTTTCAACATA 57.430 45.000 0.00 0.00 0.00 2.29
402 449 1.611491 GATTTGCGGGTCCTTTCAACA 59.389 47.619 0.00 0.00 0.00 3.33
403 450 1.611491 TGATTTGCGGGTCCTTTCAAC 59.389 47.619 0.00 0.00 0.00 3.18
404 451 1.988293 TGATTTGCGGGTCCTTTCAA 58.012 45.000 0.00 0.00 0.00 2.69
406 453 1.611491 TGTTGATTTGCGGGTCCTTTC 59.389 47.619 0.00 0.00 0.00 2.62
407 454 1.698506 TGTTGATTTGCGGGTCCTTT 58.301 45.000 0.00 0.00 0.00 3.11
409 456 1.176527 CATGTTGATTTGCGGGTCCT 58.823 50.000 0.00 0.00 0.00 3.85
411 458 1.402720 CCACATGTTGATTTGCGGGTC 60.403 52.381 0.00 0.00 0.00 4.46
412 459 0.602562 CCACATGTTGATTTGCGGGT 59.397 50.000 0.00 0.00 0.00 5.28
413 460 0.602562 ACCACATGTTGATTTGCGGG 59.397 50.000 3.55 0.00 0.00 6.13
414 461 2.437200 AACCACATGTTGATTTGCGG 57.563 45.000 3.55 0.00 35.31 5.69
423 470 4.335416 CTCTAACCATCCAACCACATGTT 58.665 43.478 0.00 0.00 37.80 2.71
424 471 3.308402 CCTCTAACCATCCAACCACATGT 60.308 47.826 0.00 0.00 0.00 3.21
425 472 3.282021 CCTCTAACCATCCAACCACATG 58.718 50.000 0.00 0.00 0.00 3.21
426 473 2.242196 CCCTCTAACCATCCAACCACAT 59.758 50.000 0.00 0.00 0.00 3.21
428 475 1.913419 TCCCTCTAACCATCCAACCAC 59.087 52.381 0.00 0.00 0.00 4.16
429 476 1.913419 GTCCCTCTAACCATCCAACCA 59.087 52.381 0.00 0.00 0.00 3.67
430 477 2.092914 CAGTCCCTCTAACCATCCAACC 60.093 54.545 0.00 0.00 0.00 3.77
431 478 2.572104 ACAGTCCCTCTAACCATCCAAC 59.428 50.000 0.00 0.00 0.00 3.77
433 480 2.187958 CACAGTCCCTCTAACCATCCA 58.812 52.381 0.00 0.00 0.00 3.41
435 482 2.188817 ACCACAGTCCCTCTAACCATC 58.811 52.381 0.00 0.00 0.00 3.51
436 483 2.344093 ACCACAGTCCCTCTAACCAT 57.656 50.000 0.00 0.00 0.00 3.55
437 484 3.012502 AGATACCACAGTCCCTCTAACCA 59.987 47.826 0.00 0.00 0.00 3.67
438 485 3.637694 GAGATACCACAGTCCCTCTAACC 59.362 52.174 0.00 0.00 0.00 2.85
439 486 3.637694 GGAGATACCACAGTCCCTCTAAC 59.362 52.174 0.00 0.00 38.79 2.34
440 487 3.271225 TGGAGATACCACAGTCCCTCTAA 59.729 47.826 0.00 0.00 44.64 2.10
441 488 2.856864 TGGAGATACCACAGTCCCTCTA 59.143 50.000 0.00 0.00 44.64 2.43
442 489 1.646447 TGGAGATACCACAGTCCCTCT 59.354 52.381 0.00 0.00 44.64 3.69
444 491 1.967274 GCTGGAGATACCACAGTCCCT 60.967 57.143 0.00 0.00 44.64 4.20
445 492 0.466124 GCTGGAGATACCACAGTCCC 59.534 60.000 0.00 0.00 44.64 4.46
446 493 0.466124 GGCTGGAGATACCACAGTCC 59.534 60.000 0.00 0.00 44.64 3.85
447 494 0.466124 GGGCTGGAGATACCACAGTC 59.534 60.000 0.00 0.00 44.64 3.51
449 496 1.071385 GATGGGCTGGAGATACCACAG 59.929 57.143 0.00 0.00 44.64 3.66
450 497 1.131638 GATGGGCTGGAGATACCACA 58.868 55.000 0.00 0.00 44.64 4.17
453 500 0.689623 CCTGATGGGCTGGAGATACC 59.310 60.000 0.00 0.00 37.79 2.73
471 518 1.177401 GAGCACCAGGATTTGAACCC 58.823 55.000 0.00 0.00 0.00 4.11
472 519 0.804989 CGAGCACCAGGATTTGAACC 59.195 55.000 0.00 0.00 0.00 3.62
473 520 0.169009 GCGAGCACCAGGATTTGAAC 59.831 55.000 0.00 0.00 0.00 3.18
475 522 0.035152 ATGCGAGCACCAGGATTTGA 60.035 50.000 0.00 0.00 0.00 2.69
476 523 0.813184 AATGCGAGCACCAGGATTTG 59.187 50.000 0.00 0.00 0.00 2.32
477 524 1.549203 AAATGCGAGCACCAGGATTT 58.451 45.000 0.00 0.00 34.37 2.17
478 525 2.418368 TAAATGCGAGCACCAGGATT 57.582 45.000 0.00 0.00 0.00 3.01
479 526 2.645838 ATAAATGCGAGCACCAGGAT 57.354 45.000 0.00 0.00 0.00 3.24
480 527 2.288666 GAATAAATGCGAGCACCAGGA 58.711 47.619 0.00 0.00 0.00 3.86
482 529 2.032550 CAGGAATAAATGCGAGCACCAG 59.967 50.000 0.00 0.00 0.00 4.00
484 531 2.288666 TCAGGAATAAATGCGAGCACC 58.711 47.619 0.00 0.00 0.00 5.01
485 532 4.558538 ATTCAGGAATAAATGCGAGCAC 57.441 40.909 0.00 0.00 0.00 4.40
487 534 8.579682 AAATAAATTCAGGAATAAATGCGAGC 57.420 30.769 0.00 0.00 0.00 5.03
501 548 9.825972 TCGCTGAAAGTTCTAAAATAAATTCAG 57.174 29.630 7.60 7.60 35.30 3.02
504 551 9.076596 GCATCGCTGAAAGTTCTAAAATAAATT 57.923 29.630 0.00 0.00 35.30 1.82
505 552 7.429340 CGCATCGCTGAAAGTTCTAAAATAAAT 59.571 33.333 0.00 0.00 35.30 1.40
506 553 6.740905 CGCATCGCTGAAAGTTCTAAAATAAA 59.259 34.615 0.00 0.00 35.30 1.40
507 554 6.247903 CGCATCGCTGAAAGTTCTAAAATAA 58.752 36.000 0.00 0.00 35.30 1.40
509 556 4.651994 CGCATCGCTGAAAGTTCTAAAAT 58.348 39.130 0.00 0.00 35.30 1.82
510 557 4.065423 CGCATCGCTGAAAGTTCTAAAA 57.935 40.909 0.00 0.00 35.30 1.52
511 558 3.722555 CGCATCGCTGAAAGTTCTAAA 57.277 42.857 0.00 0.00 35.30 1.85
525 572 1.769098 CTCCCACTGAATGCGCATCG 61.769 60.000 25.53 17.09 0.00 3.84
526 573 1.442526 CCTCCCACTGAATGCGCATC 61.443 60.000 25.53 17.12 0.00 3.91
527 574 1.452651 CCTCCCACTGAATGCGCAT 60.453 57.895 19.28 19.28 0.00 4.73
529 576 1.817099 CTCCTCCCACTGAATGCGC 60.817 63.158 0.00 0.00 0.00 6.09
530 577 0.460987 GTCTCCTCCCACTGAATGCG 60.461 60.000 0.00 0.00 0.00 4.73
531 578 0.460987 CGTCTCCTCCCACTGAATGC 60.461 60.000 0.00 0.00 0.00 3.56
532 579 0.898320 ACGTCTCCTCCCACTGAATG 59.102 55.000 0.00 0.00 0.00 2.67
533 580 1.550976 GAACGTCTCCTCCCACTGAAT 59.449 52.381 0.00 0.00 0.00 2.57
534 581 0.966920 GAACGTCTCCTCCCACTGAA 59.033 55.000 0.00 0.00 0.00 3.02
535 582 0.898789 GGAACGTCTCCTCCCACTGA 60.899 60.000 8.87 0.00 41.61 3.41
536 583 1.592223 GGAACGTCTCCTCCCACTG 59.408 63.158 8.87 0.00 41.61 3.66
537 584 4.115270 GGAACGTCTCCTCCCACT 57.885 61.111 8.87 0.00 41.61 4.00
549 596 6.954950 CATCTTGAGATTTACGACGGGAACG 61.955 48.000 0.00 0.00 46.83 3.95
550 597 3.841643 TCTTGAGATTTACGACGGGAAC 58.158 45.455 0.00 0.00 0.00 3.62
551 598 4.158949 TCATCTTGAGATTTACGACGGGAA 59.841 41.667 0.00 0.00 31.21 3.97
552 599 3.697542 TCATCTTGAGATTTACGACGGGA 59.302 43.478 0.00 0.00 31.21 5.14
553 600 4.041740 TCATCTTGAGATTTACGACGGG 57.958 45.455 0.00 0.00 31.21 5.28
554 601 6.183360 GCATATCATCTTGAGATTTACGACGG 60.183 42.308 0.00 0.00 31.21 4.79
555 602 6.183360 GGCATATCATCTTGAGATTTACGACG 60.183 42.308 0.00 0.00 31.21 5.12
556 603 6.183360 CGGCATATCATCTTGAGATTTACGAC 60.183 42.308 0.00 0.00 31.21 4.34
557 604 5.863935 CGGCATATCATCTTGAGATTTACGA 59.136 40.000 0.00 0.00 31.21 3.43
558 605 5.863935 TCGGCATATCATCTTGAGATTTACG 59.136 40.000 0.00 0.00 31.21 3.18
559 606 6.870965 AGTCGGCATATCATCTTGAGATTTAC 59.129 38.462 0.00 0.00 31.21 2.01
560 607 6.997655 AGTCGGCATATCATCTTGAGATTTA 58.002 36.000 0.00 0.00 31.21 1.40
561 608 5.862845 AGTCGGCATATCATCTTGAGATTT 58.137 37.500 0.00 0.00 31.21 2.17
562 609 5.011431 TGAGTCGGCATATCATCTTGAGATT 59.989 40.000 0.00 0.00 31.21 2.40
563 610 4.525874 TGAGTCGGCATATCATCTTGAGAT 59.474 41.667 0.00 0.00 34.56 2.75
564 611 3.891366 TGAGTCGGCATATCATCTTGAGA 59.109 43.478 0.00 0.00 0.00 3.27
565 612 4.236147 CTGAGTCGGCATATCATCTTGAG 58.764 47.826 0.00 0.00 0.00 3.02
566 613 3.638627 ACTGAGTCGGCATATCATCTTGA 59.361 43.478 0.00 0.00 0.00 3.02
567 614 3.986572 GACTGAGTCGGCATATCATCTTG 59.013 47.826 0.00 0.00 0.00 3.02
568 615 3.894427 AGACTGAGTCGGCATATCATCTT 59.106 43.478 6.99 0.00 37.67 2.40
569 616 3.495331 AGACTGAGTCGGCATATCATCT 58.505 45.455 6.99 0.00 37.67 2.90
570 617 3.932545 AGACTGAGTCGGCATATCATC 57.067 47.619 6.99 0.00 37.67 2.92
571 618 4.626042 GAAAGACTGAGTCGGCATATCAT 58.374 43.478 6.99 0.00 37.67 2.45
572 619 3.489229 CGAAAGACTGAGTCGGCATATCA 60.489 47.826 6.99 0.00 37.67 2.15
573 620 3.046390 CGAAAGACTGAGTCGGCATATC 58.954 50.000 6.99 0.46 37.67 1.63
574 621 2.223829 CCGAAAGACTGAGTCGGCATAT 60.224 50.000 6.99 0.00 46.91 1.78
575 622 1.134367 CCGAAAGACTGAGTCGGCATA 59.866 52.381 6.99 0.00 46.91 3.14
576 623 0.108615 CCGAAAGACTGAGTCGGCAT 60.109 55.000 6.99 0.00 46.91 4.40
577 624 1.289066 CCGAAAGACTGAGTCGGCA 59.711 57.895 6.99 0.00 46.91 5.69
578 625 4.170723 CCGAAAGACTGAGTCGGC 57.829 61.111 6.99 0.00 46.91 5.54
580 627 2.791567 CATCTCCGAAAGACTGAGTCG 58.208 52.381 6.99 0.00 36.65 4.18
581 628 2.165437 AGCATCTCCGAAAGACTGAGTC 59.835 50.000 3.98 3.98 36.65 3.36
582 629 2.165437 GAGCATCTCCGAAAGACTGAGT 59.835 50.000 0.00 0.00 36.65 3.41
583 630 2.165234 TGAGCATCTCCGAAAGACTGAG 59.835 50.000 0.00 0.00 36.65 3.35
584 631 2.171003 TGAGCATCTCCGAAAGACTGA 58.829 47.619 0.00 0.00 36.65 3.41
585 632 2.662006 TGAGCATCTCCGAAAGACTG 57.338 50.000 0.00 0.00 36.65 3.51
586 633 3.320541 CCTATGAGCATCTCCGAAAGACT 59.679 47.826 0.00 0.00 36.65 3.24
587 634 3.553922 CCCTATGAGCATCTCCGAAAGAC 60.554 52.174 0.00 0.00 36.65 3.01
588 635 2.630098 CCCTATGAGCATCTCCGAAAGA 59.370 50.000 0.00 0.00 38.72 2.52
589 636 2.289320 CCCCTATGAGCATCTCCGAAAG 60.289 54.545 0.00 0.00 34.92 2.62
590 637 1.694150 CCCCTATGAGCATCTCCGAAA 59.306 52.381 0.00 0.00 34.92 3.46
591 638 1.342074 CCCCTATGAGCATCTCCGAA 58.658 55.000 0.00 0.00 34.92 4.30
592 639 0.188587 ACCCCTATGAGCATCTCCGA 59.811 55.000 0.00 0.00 34.92 4.55
593 640 1.821753 CTACCCCTATGAGCATCTCCG 59.178 57.143 0.00 0.00 34.92 4.63
594 641 2.183679 CCTACCCCTATGAGCATCTCC 58.816 57.143 0.00 0.00 34.92 3.71
595 642 2.183679 CCCTACCCCTATGAGCATCTC 58.816 57.143 0.00 0.00 34.92 2.75
596 643 1.509961 ACCCTACCCCTATGAGCATCT 59.490 52.381 0.00 0.00 34.92 2.90
597 644 1.625818 CACCCTACCCCTATGAGCATC 59.374 57.143 0.00 0.00 0.00 3.91
598 645 1.061346 ACACCCTACCCCTATGAGCAT 60.061 52.381 0.00 0.00 0.00 3.79
599 646 0.341961 ACACCCTACCCCTATGAGCA 59.658 55.000 0.00 0.00 0.00 4.26
600 647 0.759346 CACACCCTACCCCTATGAGC 59.241 60.000 0.00 0.00 0.00 4.26
601 648 0.759346 GCACACCCTACCCCTATGAG 59.241 60.000 0.00 0.00 0.00 2.90
602 649 1.046472 CGCACACCCTACCCCTATGA 61.046 60.000 0.00 0.00 0.00 2.15
603 650 1.335132 ACGCACACCCTACCCCTATG 61.335 60.000 0.00 0.00 0.00 2.23
604 651 1.002533 ACGCACACCCTACCCCTAT 59.997 57.895 0.00 0.00 0.00 2.57
605 652 1.985662 CACGCACACCCTACCCCTA 60.986 63.158 0.00 0.00 0.00 3.53
606 653 3.319198 CACGCACACCCTACCCCT 61.319 66.667 0.00 0.00 0.00 4.79
607 654 3.633116 ACACGCACACCCTACCCC 61.633 66.667 0.00 0.00 0.00 4.95
608 655 2.358247 CACACGCACACCCTACCC 60.358 66.667 0.00 0.00 0.00 3.69
609 656 1.959226 CACACACGCACACCCTACC 60.959 63.158 0.00 0.00 0.00 3.18
610 657 2.604174 GCACACACGCACACCCTAC 61.604 63.158 0.00 0.00 0.00 3.18
611 658 2.280524 GCACACACGCACACCCTA 60.281 61.111 0.00 0.00 0.00 3.53
614 661 3.783588 GAACGCACACACGCACACC 62.784 63.158 0.00 0.00 36.19 4.16
615 662 2.350760 GAACGCACACACGCACAC 60.351 61.111 0.00 0.00 36.19 3.82
616 663 0.876342 TATGAACGCACACACGCACA 60.876 50.000 0.00 0.00 36.19 4.57
617 664 0.179250 CTATGAACGCACACACGCAC 60.179 55.000 0.00 0.00 36.19 5.34
618 665 0.319125 TCTATGAACGCACACACGCA 60.319 50.000 0.00 0.00 36.19 5.24
619 666 0.366871 CTCTATGAACGCACACACGC 59.633 55.000 0.00 0.00 36.19 5.34
620 667 0.992072 CCTCTATGAACGCACACACG 59.008 55.000 0.00 0.00 39.50 4.49
621 668 1.726791 CACCTCTATGAACGCACACAC 59.273 52.381 0.00 0.00 0.00 3.82
622 669 1.616374 TCACCTCTATGAACGCACACA 59.384 47.619 0.00 0.00 0.00 3.72
623 670 2.263077 CTCACCTCTATGAACGCACAC 58.737 52.381 0.00 0.00 0.00 3.82
624 671 1.893137 ACTCACCTCTATGAACGCACA 59.107 47.619 0.00 0.00 0.00 4.57
625 672 2.656560 ACTCACCTCTATGAACGCAC 57.343 50.000 0.00 0.00 0.00 5.34
626 673 2.826128 AGAACTCACCTCTATGAACGCA 59.174 45.455 0.00 0.00 0.00 5.24
627 674 3.512033 AGAACTCACCTCTATGAACGC 57.488 47.619 0.00 0.00 0.00 4.84
633 680 3.954904 ACGTGCATAGAACTCACCTCTAT 59.045 43.478 0.00 0.00 36.71 1.98
634 681 3.128764 CACGTGCATAGAACTCACCTCTA 59.871 47.826 0.82 0.00 0.00 2.43
635 682 2.094494 CACGTGCATAGAACTCACCTCT 60.094 50.000 0.82 0.00 0.00 3.69
636 683 2.263077 CACGTGCATAGAACTCACCTC 58.737 52.381 0.82 0.00 0.00 3.85
637 684 1.618837 ACACGTGCATAGAACTCACCT 59.381 47.619 17.22 0.00 0.00 4.00
638 685 2.080286 ACACGTGCATAGAACTCACC 57.920 50.000 17.22 0.00 0.00 4.02
639 686 4.436847 CGTATACACGTGCATAGAACTCAC 59.563 45.833 17.22 0.36 43.31 3.51
640 687 4.594136 CGTATACACGTGCATAGAACTCA 58.406 43.478 17.22 0.00 43.31 3.41
658 705 0.243907 ACAGACACAAGCGCTCGTAT 59.756 50.000 12.06 0.00 0.00 3.06
660 707 0.663568 GTACAGACACAAGCGCTCGT 60.664 55.000 12.06 0.82 0.00 4.18
663 710 1.372997 CGGTACAGACACAAGCGCT 60.373 57.895 2.64 2.64 0.00 5.92
664 711 0.736325 ATCGGTACAGACACAAGCGC 60.736 55.000 0.00 0.00 34.35 5.92
665 712 0.992072 CATCGGTACAGACACAAGCG 59.008 55.000 0.00 0.00 35.57 4.68
666 713 2.080286 ACATCGGTACAGACACAAGC 57.920 50.000 0.00 0.00 0.00 4.01
690 737 5.175127 GGCGGGTCATTTCAACATATTTTT 58.825 37.500 0.00 0.00 0.00 1.94
691 738 4.221703 TGGCGGGTCATTTCAACATATTTT 59.778 37.500 0.00 0.00 0.00 1.82
692 739 3.766591 TGGCGGGTCATTTCAACATATTT 59.233 39.130 0.00 0.00 0.00 1.40
693 740 3.130340 GTGGCGGGTCATTTCAACATATT 59.870 43.478 0.00 0.00 0.00 1.28
694 741 2.687935 GTGGCGGGTCATTTCAACATAT 59.312 45.455 0.00 0.00 0.00 1.78
695 742 2.088423 GTGGCGGGTCATTTCAACATA 58.912 47.619 0.00 0.00 0.00 2.29
696 743 0.887933 GTGGCGGGTCATTTCAACAT 59.112 50.000 0.00 0.00 0.00 2.71
697 744 0.179004 AGTGGCGGGTCATTTCAACA 60.179 50.000 0.00 0.00 0.00 3.33
698 745 0.240945 CAGTGGCGGGTCATTTCAAC 59.759 55.000 0.00 0.00 0.00 3.18
699 746 0.179004 ACAGTGGCGGGTCATTTCAA 60.179 50.000 0.00 0.00 0.00 2.69
700 747 0.179004 AACAGTGGCGGGTCATTTCA 60.179 50.000 0.00 0.00 0.00 2.69
702 749 1.408969 AAAACAGTGGCGGGTCATTT 58.591 45.000 0.00 0.00 0.00 2.32
703 750 1.408969 AAAAACAGTGGCGGGTCATT 58.591 45.000 0.00 0.00 0.00 2.57
704 751 3.125520 AAAAACAGTGGCGGGTCAT 57.874 47.368 0.00 0.00 0.00 3.06
741 788 3.001330 GTCGAGGAAAAAGGACATATGCG 59.999 47.826 1.58 0.00 0.00 4.73
742 789 3.938963 TGTCGAGGAAAAAGGACATATGC 59.061 43.478 1.58 0.00 34.71 3.14
743 790 4.935205 TGTGTCGAGGAAAAAGGACATATG 59.065 41.667 0.00 0.00 41.02 1.78
747 794 2.169769 ACTGTGTCGAGGAAAAAGGACA 59.830 45.455 0.00 0.00 37.09 4.02
752 799 1.668751 GTGCACTGTGTCGAGGAAAAA 59.331 47.619 10.32 0.00 0.00 1.94
897 1298 2.224159 ACGTGTGAGGAGGGCCAAT 61.224 57.895 6.18 0.00 36.29 3.16
898 1299 2.847234 ACGTGTGAGGAGGGCCAA 60.847 61.111 6.18 0.00 36.29 4.52
1209 1683 5.248870 TGAAACAAAAGGAGCAAGAAGAC 57.751 39.130 0.00 0.00 0.00 3.01
1349 2099 2.693074 GCCCCCATCACAAATCGTAAAT 59.307 45.455 0.00 0.00 0.00 1.40
1354 2109 2.276732 ATAGCCCCCATCACAAATCG 57.723 50.000 0.00 0.00 0.00 3.34
1395 2155 2.035066 AGCAGTGAATCTTGCAAACACC 59.965 45.455 16.42 7.48 32.76 4.16
1411 2171 2.281070 CGACCCAGCACAAGCAGT 60.281 61.111 0.00 0.00 45.49 4.40
1412 2172 3.730761 GCGACCCAGCACAAGCAG 61.731 66.667 0.00 0.00 45.49 4.24
1413 2173 4.560743 TGCGACCCAGCACAAGCA 62.561 61.111 0.00 0.00 45.49 3.91
1414 2174 3.730761 CTGCGACCCAGCACAAGC 61.731 66.667 0.00 0.00 42.92 4.01
1415 2175 3.052082 CCTGCGACCCAGCACAAG 61.052 66.667 0.00 0.00 42.92 3.16
1416 2176 3.535629 CTCCTGCGACCCAGCACAA 62.536 63.158 0.00 0.00 42.92 3.33
1417 2177 4.007644 CTCCTGCGACCCAGCACA 62.008 66.667 0.00 0.00 42.92 4.57
1421 2181 3.245668 AAGTGCTCCTGCGACCCAG 62.246 63.158 0.00 0.00 43.34 4.45
1422 2182 3.240134 GAAGTGCTCCTGCGACCCA 62.240 63.158 0.00 0.00 43.34 4.51
1423 2183 2.435059 GAAGTGCTCCTGCGACCC 60.435 66.667 0.00 0.00 43.34 4.46
1424 2184 1.739562 CTGAAGTGCTCCTGCGACC 60.740 63.158 0.00 0.00 43.34 4.79
1425 2185 0.735632 CTCTGAAGTGCTCCTGCGAC 60.736 60.000 0.00 0.00 43.34 5.19
1426 2186 1.588597 CTCTGAAGTGCTCCTGCGA 59.411 57.895 0.00 0.00 43.34 5.10
1427 2187 1.447489 CCTCTGAAGTGCTCCTGCG 60.447 63.158 0.00 0.00 43.34 5.18
1428 2188 0.322975 TTCCTCTGAAGTGCTCCTGC 59.677 55.000 0.00 0.00 40.20 4.85
1429 2189 1.338579 GGTTCCTCTGAAGTGCTCCTG 60.339 57.143 0.00 0.00 0.00 3.86
1430 2190 0.980423 GGTTCCTCTGAAGTGCTCCT 59.020 55.000 0.00 0.00 0.00 3.69
1431 2191 0.687354 TGGTTCCTCTGAAGTGCTCC 59.313 55.000 0.00 0.00 0.00 4.70
1432 2192 2.550830 TTGGTTCCTCTGAAGTGCTC 57.449 50.000 0.00 0.00 0.00 4.26
1433 2193 4.851639 ATATTGGTTCCTCTGAAGTGCT 57.148 40.909 0.00 0.00 0.00 4.40
1434 2194 5.703130 GGATATATTGGTTCCTCTGAAGTGC 59.297 44.000 0.00 0.00 0.00 4.40
1484 2246 8.607459 CAAATATCAAGAGTGATCAGTGTAACC 58.393 37.037 8.05 0.00 43.69 2.85
1488 2250 7.389232 TGACAAATATCAAGAGTGATCAGTGT 58.611 34.615 8.05 0.00 43.69 3.55
1508 2270 8.878769 GGATTTAGCAAAAGAAAACTTTGACAA 58.121 29.630 0.00 0.00 36.12 3.18
1546 2332 6.539103 CAGTAAACTGAGGGCTATAAAAGGTC 59.461 42.308 3.99 0.00 46.59 3.85
1557 2343 0.108329 TAGCGCAGTAAACTGAGGGC 60.108 55.000 11.47 12.38 46.59 5.19
1682 3177 5.007626 CCGTGTAAGCGTATACTACCTTACA 59.992 44.000 22.83 22.83 42.82 2.41
1748 3250 1.889545 AAGGAGTTCAAGTCTGCTGC 58.110 50.000 0.00 0.00 34.07 5.25
1943 4833 8.664798 CGTGAGAAGGACAATTAACATCAATAA 58.335 33.333 0.00 0.00 0.00 1.40
1945 4835 6.403636 GCGTGAGAAGGACAATTAACATCAAT 60.404 38.462 0.00 0.00 0.00 2.57
1946 4836 5.106712 GCGTGAGAAGGACAATTAACATCAA 60.107 40.000 0.00 0.00 0.00 2.57
1947 4837 4.391830 GCGTGAGAAGGACAATTAACATCA 59.608 41.667 0.00 0.00 0.00 3.07
1948 4838 4.631813 AGCGTGAGAAGGACAATTAACATC 59.368 41.667 0.00 0.00 0.00 3.06
1968 4858 0.883833 ATGGCTCACTGGAAAAAGCG 59.116 50.000 0.00 0.00 35.58 4.68
1972 4862 4.405358 AGTTCAAAATGGCTCACTGGAAAA 59.595 37.500 0.00 0.00 0.00 2.29
1979 4869 4.327680 ACTCCTAGTTCAAAATGGCTCAC 58.672 43.478 0.00 0.00 0.00 3.51
1980 4870 4.640771 ACTCCTAGTTCAAAATGGCTCA 57.359 40.909 0.00 0.00 0.00 4.26
1992 4882 7.512058 AGACATATCATGGATGAACTCCTAGTT 59.488 37.037 13.49 0.00 45.21 2.24
1993 4883 7.015680 AGACATATCATGGATGAACTCCTAGT 58.984 38.462 13.49 0.00 45.21 2.57
1994 4884 7.479352 AGACATATCATGGATGAACTCCTAG 57.521 40.000 13.49 0.00 45.21 3.02
2000 4890 6.713903 ACATGGAAGACATATCATGGATGAAC 59.286 38.462 13.49 8.18 40.69 3.18
2015 4905 4.319177 ACAGCAAGAGTTACATGGAAGAC 58.681 43.478 0.00 0.00 0.00 3.01
2019 4909 5.178623 CGTAAAACAGCAAGAGTTACATGGA 59.821 40.000 0.00 0.00 0.00 3.41
2021 4911 5.985781 ACGTAAAACAGCAAGAGTTACATG 58.014 37.500 0.00 0.00 0.00 3.21
2022 4912 7.900782 ATACGTAAAACAGCAAGAGTTACAT 57.099 32.000 0.00 0.00 0.00 2.29
2027 4917 5.302360 TCCAATACGTAAAACAGCAAGAGT 58.698 37.500 0.00 0.00 0.00 3.24
2029 4919 5.180492 CCTTCCAATACGTAAAACAGCAAGA 59.820 40.000 0.00 0.00 0.00 3.02
2031 4921 5.064558 TCCTTCCAATACGTAAAACAGCAA 58.935 37.500 0.00 0.00 0.00 3.91
2043 4933 7.606839 GGTAATATTAGCACCTCCTTCCAATAC 59.393 40.741 17.70 0.00 0.00 1.89
2068 4958 4.899502 AGAATATCAATAGCCCTCAACGG 58.100 43.478 0.00 0.00 0.00 4.44
2070 4960 7.716998 TGAGAAAGAATATCAATAGCCCTCAAC 59.283 37.037 0.00 0.00 0.00 3.18
2090 4980 9.063615 CACATTCATTATCTGGATCATGAGAAA 57.936 33.333 0.09 0.00 34.19 2.52
2095 4985 7.572539 CGTTCCACATTCATTATCTGGATCATG 60.573 40.741 0.00 0.00 32.18 3.07
2121 5011 8.129211 CCAATATTTACAACTCCCGAATCTTTC 58.871 37.037 0.00 0.00 0.00 2.62
2130 5020 4.402474 AGCTTGCCAATATTTACAACTCCC 59.598 41.667 0.00 0.00 0.00 4.30
2232 5122 6.647212 TTCGAATTTAGTGCACTACATCAG 57.353 37.500 26.02 19.70 0.00 2.90
2267 5160 6.006275 AGCTAGCTATTTCCTGGATGAAAA 57.994 37.500 17.69 0.00 37.74 2.29
2386 5282 6.688637 TGTTCCAGCAGAGATCAAATATTG 57.311 37.500 0.00 0.00 0.00 1.90
2387 5283 7.058525 TGATGTTCCAGCAGAGATCAAATATT 58.941 34.615 0.00 0.00 0.00 1.28
2388 5284 6.598503 TGATGTTCCAGCAGAGATCAAATAT 58.401 36.000 0.00 0.00 0.00 1.28
2389 5285 5.993055 TGATGTTCCAGCAGAGATCAAATA 58.007 37.500 0.00 0.00 0.00 1.40
2390 5286 4.851843 TGATGTTCCAGCAGAGATCAAAT 58.148 39.130 0.00 0.00 0.00 2.32
2391 5287 4.290711 TGATGTTCCAGCAGAGATCAAA 57.709 40.909 0.00 0.00 0.00 2.69
2392 5288 3.986996 TGATGTTCCAGCAGAGATCAA 57.013 42.857 0.00 0.00 0.00 2.57
2393 5289 4.498894 AATGATGTTCCAGCAGAGATCA 57.501 40.909 0.00 0.00 31.88 2.92
2852 5756 2.202932 CGATCCAGCAACGGGGAG 60.203 66.667 0.00 0.00 36.45 4.30
2879 5783 9.725019 TCTTGCAATCTAACTAGAATTTCTTGA 57.275 29.630 13.64 2.70 35.69 3.02
3087 5991 9.926751 CTGATTGTAGATAGTAAAACAATGCAG 57.073 33.333 10.94 12.28 41.37 4.41
3112 6016 7.500559 AGAAAACTCAATAGTCAAGACAAAGCT 59.499 33.333 2.72 0.00 33.75 3.74
3442 6346 8.351495 TGCAGACAACAATTTTTCATTTAGAC 57.649 30.769 0.00 0.00 0.00 2.59
3673 6579 3.503363 TGCATCAAGACTCAACATGGAAC 59.497 43.478 0.00 0.00 0.00 3.62
3726 9662 6.748333 TTTTCTGAAGATGGATCATCACAC 57.252 37.500 10.08 2.62 42.72 3.82
3749 9685 2.305927 ACACATCAGAATCTCCCGGTTT 59.694 45.455 0.00 0.00 0.00 3.27
4432 11403 1.063492 TGCCTGATTGCATCCCAGAAT 60.063 47.619 10.82 0.00 36.04 2.40
4515 11486 2.004017 GGATGTTGTCGCCGTTATTGA 58.996 47.619 0.00 0.00 0.00 2.57
4562 11533 4.159879 ACGGTTTGTTAATTCAACACCCAA 59.840 37.500 0.00 0.00 46.80 4.12
4575 11546 2.950433 CCGCTTCTAGACGGTTTGTTA 58.050 47.619 12.48 0.00 44.46 2.41
4721 11731 2.839228 AGAGAGGAGGTTAGCATGGTT 58.161 47.619 1.12 0.00 0.00 3.67
4722 11732 2.559381 AGAGAGGAGGTTAGCATGGT 57.441 50.000 1.62 1.62 0.00 3.55
4723 11733 3.922171 AAAGAGAGGAGGTTAGCATGG 57.078 47.619 0.00 0.00 0.00 3.66
4724 11734 4.142513 GCAAAAAGAGAGGAGGTTAGCATG 60.143 45.833 0.00 0.00 0.00 4.06
4725 11735 4.013050 GCAAAAAGAGAGGAGGTTAGCAT 58.987 43.478 0.00 0.00 0.00 3.79
4726 11736 3.073062 AGCAAAAAGAGAGGAGGTTAGCA 59.927 43.478 0.00 0.00 0.00 3.49
4727 11737 3.680490 AGCAAAAAGAGAGGAGGTTAGC 58.320 45.455 0.00 0.00 0.00 3.09
4728 11738 4.934602 CAGAGCAAAAAGAGAGGAGGTTAG 59.065 45.833 0.00 0.00 0.00 2.34
4729 11739 4.348168 ACAGAGCAAAAAGAGAGGAGGTTA 59.652 41.667 0.00 0.00 0.00 2.85
4730 11740 3.137360 ACAGAGCAAAAAGAGAGGAGGTT 59.863 43.478 0.00 0.00 0.00 3.50
4731 11741 2.708325 ACAGAGCAAAAAGAGAGGAGGT 59.292 45.455 0.00 0.00 0.00 3.85
4732 11742 3.072944 CACAGAGCAAAAAGAGAGGAGG 58.927 50.000 0.00 0.00 0.00 4.30
4733 11743 3.737850 ACACAGAGCAAAAAGAGAGGAG 58.262 45.455 0.00 0.00 0.00 3.69
4734 11744 3.845781 ACACAGAGCAAAAAGAGAGGA 57.154 42.857 0.00 0.00 0.00 3.71
4735 11745 3.629398 ACAACACAGAGCAAAAAGAGAGG 59.371 43.478 0.00 0.00 0.00 3.69
4736 11746 4.889832 ACAACACAGAGCAAAAAGAGAG 57.110 40.909 0.00 0.00 0.00 3.20
4737 11747 6.054941 TCATACAACACAGAGCAAAAAGAGA 58.945 36.000 0.00 0.00 0.00 3.10
4738 11748 6.304356 TCATACAACACAGAGCAAAAAGAG 57.696 37.500 0.00 0.00 0.00 2.85
4739 11749 6.882610 ATCATACAACACAGAGCAAAAAGA 57.117 33.333 0.00 0.00 0.00 2.52
4740 11750 7.935338 AAATCATACAACACAGAGCAAAAAG 57.065 32.000 0.00 0.00 0.00 2.27
4741 11751 8.409371 TGTAAATCATACAACACAGAGCAAAAA 58.591 29.630 0.00 0.00 0.00 1.94
4742 11752 7.935520 TGTAAATCATACAACACAGAGCAAAA 58.064 30.769 0.00 0.00 0.00 2.44
4743 11753 7.503521 TGTAAATCATACAACACAGAGCAAA 57.496 32.000 0.00 0.00 0.00 3.68
4744 11754 7.174772 ACATGTAAATCATACAACACAGAGCAA 59.825 33.333 0.00 0.00 34.67 3.91
4745 11755 6.654582 ACATGTAAATCATACAACACAGAGCA 59.345 34.615 0.00 0.00 34.67 4.26
4746 11756 6.963242 CACATGTAAATCATACAACACAGAGC 59.037 38.462 0.00 0.00 34.67 4.09
4747 11757 8.255394 TCACATGTAAATCATACAACACAGAG 57.745 34.615 0.00 0.00 34.67 3.35
4748 11758 8.614469 TTCACATGTAAATCATACAACACAGA 57.386 30.769 0.00 0.00 34.67 3.41
4749 11759 9.281075 CATTCACATGTAAATCATACAACACAG 57.719 33.333 0.00 0.00 34.67 3.66
4750 11760 8.791675 ACATTCACATGTAAATCATACAACACA 58.208 29.630 0.00 0.00 42.24 3.72
4751 11761 9.064804 CACATTCACATGTAAATCATACAACAC 57.935 33.333 0.00 0.00 42.14 3.32
4752 11762 9.007901 TCACATTCACATGTAAATCATACAACA 57.992 29.630 0.00 0.00 42.14 3.33
4753 11763 9.494479 CTCACATTCACATGTAAATCATACAAC 57.506 33.333 0.00 0.00 42.14 3.32
4754 11764 9.230122 ACTCACATTCACATGTAAATCATACAA 57.770 29.630 0.00 0.00 42.14 2.41
4755 11765 8.667463 CACTCACATTCACATGTAAATCATACA 58.333 33.333 0.00 0.00 42.14 2.29
4756 11766 8.124823 CCACTCACATTCACATGTAAATCATAC 58.875 37.037 0.00 0.00 42.14 2.39
4757 11767 7.201723 GCCACTCACATTCACATGTAAATCATA 60.202 37.037 0.00 0.00 42.14 2.15
4758 11768 6.405065 GCCACTCACATTCACATGTAAATCAT 60.405 38.462 0.00 0.00 42.14 2.45
4759 11769 5.106197 GCCACTCACATTCACATGTAAATCA 60.106 40.000 0.00 0.00 42.14 2.57
4945 11956 3.165160 ATGCCCATAGTCGGCCGAC 62.165 63.158 43.92 43.92 46.48 4.79
5256 12269 0.614979 GGACACAGGGAGAGCAGGTA 60.615 60.000 0.00 0.00 0.00 3.08
5275 12288 2.919494 GCCAAACTGAAGGTGCCGG 61.919 63.158 0.00 0.00 0.00 6.13
5315 12328 2.208431 GATCCATTCTTCAGGTGCTCG 58.792 52.381 0.00 0.00 0.00 5.03
5384 13082 2.204461 TCTTCGTCCTTCCGCACCA 61.204 57.895 0.00 0.00 0.00 4.17
5387 13085 2.196382 CTCGTCTTCGTCCTTCCGCA 62.196 60.000 0.00 0.00 38.33 5.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.