Multiple sequence alignment - TraesCS5D01G307500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G307500 chr5D 100.000 3597 0 0 1 3597 404187418 404191014 0.000000e+00 6643.0
1 TraesCS5D01G307500 chr5D 94.448 1657 65 12 959 2608 403155643 403154007 0.000000e+00 2525.0
2 TraesCS5D01G307500 chr5D 93.953 430 25 1 46 475 324410042 324410470 0.000000e+00 649.0
3 TraesCS5D01G307500 chr5D 78.472 288 51 8 3007 3285 150939 150654 1.030000e-40 178.0
4 TraesCS5D01G307500 chr5B 94.689 1751 62 18 860 2599 484645152 484643422 0.000000e+00 2689.0
5 TraesCS5D01G307500 chr5B 91.461 1136 62 20 1703 2829 485427487 485428596 0.000000e+00 1528.0
6 TraesCS5D01G307500 chr5B 96.405 751 25 2 959 1708 485426269 485427018 0.000000e+00 1236.0
7 TraesCS5D01G307500 chr5B 92.308 182 12 2 675 855 484645387 484645207 1.280000e-64 257.0
8 TraesCS5D01G307500 chr5B 79.599 299 47 10 2998 3285 237621 237326 6.090000e-48 202.0
9 TraesCS5D01G307500 chr5B 79.599 299 47 10 2998 3285 1584108 1583813 6.090000e-48 202.0
10 TraesCS5D01G307500 chr5B 79.264 299 48 10 2998 3285 5914894 5915189 2.830000e-46 196.0
11 TraesCS5D01G307500 chr5B 74.531 373 52 19 2921 3271 485428609 485428960 4.880000e-24 122.0
12 TraesCS5D01G307500 chr5A 94.184 1771 69 17 854 2609 510883554 510885305 0.000000e+00 2669.0
13 TraesCS5D01G307500 chr5A 94.527 1078 55 2 897 1970 510015745 510014668 0.000000e+00 1661.0
14 TraesCS5D01G307500 chr5A 90.637 769 41 11 2047 2804 510013550 510012802 0.000000e+00 992.0
15 TraesCS5D01G307500 chr5A 94.213 432 24 1 46 477 598827092 598827522 0.000000e+00 658.0
16 TraesCS5D01G307500 chr5A 82.609 276 25 12 3323 3594 510003737 510003481 4.670000e-54 222.0
17 TraesCS5D01G307500 chr5A 81.884 276 27 8 3323 3594 510012388 510012132 1.010000e-50 211.0
18 TraesCS5D01G307500 chr5A 93.878 98 5 1 2833 2930 51547437 51547341 2.890000e-31 147.0
19 TraesCS5D01G307500 chr5A 82.530 166 18 7 2914 3072 510012796 510012635 6.260000e-28 135.0
20 TraesCS5D01G307500 chr5A 90.000 100 4 2 2710 2804 510004257 510004159 1.360000e-24 124.0
21 TraesCS5D01G307500 chr5A 78.286 175 17 8 2914 3072 510004153 510003984 3.820000e-15 93.5
22 TraesCS5D01G307500 chr5A 91.071 56 3 2 1972 2027 510013601 510013548 1.390000e-09 75.0
23 TraesCS5D01G307500 chr1A 85.714 1596 162 31 1016 2603 284320591 284322128 0.000000e+00 1624.0
24 TraesCS5D01G307500 chr1A 76.699 309 53 10 2994 3287 243605365 243605061 1.730000e-33 154.0
25 TraesCS5D01G307500 chr1D 91.856 970 77 2 1001 1969 220420142 220421110 0.000000e+00 1352.0
26 TraesCS5D01G307500 chr1D 93.968 431 25 1 46 476 467389495 467389066 0.000000e+00 651.0
27 TraesCS5D01G307500 chr1D 87.614 549 59 6 2064 2603 220421178 220421726 2.360000e-176 628.0
28 TraesCS5D01G307500 chr1D 100.000 50 0 0 1 50 75704632 75704583 3.820000e-15 93.5
29 TraesCS5D01G307500 chr1D 100.000 49 0 0 1 49 339217453 339217501 1.380000e-14 91.6
30 TraesCS5D01G307500 chr1D 100.000 49 0 0 1 49 423728232 423728280 1.380000e-14 91.6
31 TraesCS5D01G307500 chr1D 89.706 68 6 1 1 67 407462197 407462130 6.400000e-13 86.1
32 TraesCS5D01G307500 chr1B 91.527 956 77 4 1016 1969 315390925 315389972 0.000000e+00 1314.0
33 TraesCS5D01G307500 chr1B 87.432 549 60 6 2064 2603 315389901 315389353 1.100000e-174 623.0
34 TraesCS5D01G307500 chr1B 95.699 93 4 0 2832 2924 497661585 497661677 2.240000e-32 150.0
35 TraesCS5D01G307500 chr1B 91.429 105 6 3 2828 2930 634510172 634510069 1.350000e-29 141.0
36 TraesCS5D01G307500 chr2D 90.346 984 82 6 988 1969 336653636 336654608 0.000000e+00 1279.0
37 TraesCS5D01G307500 chr2D 95.128 431 21 0 46 476 425744369 425744799 0.000000e+00 680.0
38 TraesCS5D01G307500 chr2D 94.432 431 23 1 46 475 276936318 276936748 0.000000e+00 662.0
39 TraesCS5D01G307500 chr2D 94.213 432 24 1 46 477 285349442 285349012 0.000000e+00 658.0
40 TraesCS5D01G307500 chr2D 86.623 456 48 10 2064 2507 336654727 336655181 3.230000e-135 492.0
41 TraesCS5D01G307500 chr2D 95.789 95 4 0 2830 2924 64182562 64182656 1.730000e-33 154.0
42 TraesCS5D01G307500 chr2D 92.929 99 6 1 2834 2931 361405770 361405868 3.740000e-30 143.0
43 TraesCS5D01G307500 chr2A 89.613 982 78 11 988 1967 446997993 446998952 0.000000e+00 1227.0
44 TraesCS5D01G307500 chr2A 87.614 549 57 6 2064 2602 446999067 446999614 8.480000e-176 627.0
45 TraesCS5D01G307500 chr3B 84.763 991 134 10 1001 1978 811505822 811504836 0.000000e+00 977.0
46 TraesCS5D01G307500 chr3B 87.603 121 10 5 2840 2958 818353762 818353879 6.260000e-28 135.0
47 TraesCS5D01G307500 chr7D 94.664 431 23 0 46 476 145919619 145920049 0.000000e+00 669.0
48 TraesCS5D01G307500 chr7D 94.419 430 23 1 46 475 576644603 576645031 0.000000e+00 660.0
49 TraesCS5D01G307500 chr7D 96.552 58 1 1 1 57 553173929 553173872 1.060000e-15 95.3
50 TraesCS5D01G307500 chr7D 100.000 50 0 0 1 50 246162423 246162374 3.820000e-15 93.5
51 TraesCS5D01G307500 chr3A 94.614 427 20 1 50 476 686844537 686844114 0.000000e+00 658.0
52 TraesCS5D01G307500 chr3A 91.176 102 8 1 2839 2940 639017718 639017618 1.740000e-28 137.0
53 TraesCS5D01G307500 chr2B 85.818 550 63 10 2064 2602 404183976 404184521 1.450000e-158 569.0
54 TraesCS5D01G307500 chrUn 79.470 302 42 14 2998 3285 144670965 144671260 2.830000e-46 196.0
55 TraesCS5D01G307500 chrUn 79.264 299 48 10 2998 3285 162176760 162177055 2.830000e-46 196.0
56 TraesCS5D01G307500 chrUn 79.264 299 48 10 2998 3285 222152682 222152387 2.830000e-46 196.0
57 TraesCS5D01G307500 chr6D 97.727 88 2 0 2837 2924 58042758 58042845 6.220000e-33 152.0
58 TraesCS5D01G307500 chr6D 96.667 90 3 0 2839 2928 450361055 450361144 2.240000e-32 150.0
59 TraesCS5D01G307500 chr7B 77.193 285 48 12 3016 3287 443641483 443641203 2.240000e-32 150.0
60 TraesCS5D01G307500 chr3D 100.000 50 0 0 1 50 273801977 273802026 3.820000e-15 93.5
61 TraesCS5D01G307500 chr3D 100.000 50 0 0 1 50 322032105 322032154 3.820000e-15 93.5
62 TraesCS5D01G307500 chr4D 100.000 49 0 0 1 49 40814987 40815035 1.380000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G307500 chr5D 404187418 404191014 3596 False 6643.0 6643 100.000000 1 3597 1 chr5D.!!$F2 3596
1 TraesCS5D01G307500 chr5D 403154007 403155643 1636 True 2525.0 2525 94.448000 959 2608 1 chr5D.!!$R2 1649
2 TraesCS5D01G307500 chr5B 484643422 484645387 1965 True 1473.0 2689 93.498500 675 2599 2 chr5B.!!$R3 1924
3 TraesCS5D01G307500 chr5B 485426269 485428960 2691 False 962.0 1528 87.465667 959 3271 3 chr5B.!!$F2 2312
4 TraesCS5D01G307500 chr5A 510883554 510885305 1751 False 2669.0 2669 94.184000 854 2609 1 chr5A.!!$F1 1755
5 TraesCS5D01G307500 chr5A 510012132 510015745 3613 True 614.8 1661 88.129800 897 3594 5 chr5A.!!$R3 2697
6 TraesCS5D01G307500 chr1A 284320591 284322128 1537 False 1624.0 1624 85.714000 1016 2603 1 chr1A.!!$F1 1587
7 TraesCS5D01G307500 chr1D 220420142 220421726 1584 False 990.0 1352 89.735000 1001 2603 2 chr1D.!!$F3 1602
8 TraesCS5D01G307500 chr1B 315389353 315390925 1572 True 968.5 1314 89.479500 1016 2603 2 chr1B.!!$R2 1587
9 TraesCS5D01G307500 chr2D 336653636 336655181 1545 False 885.5 1279 88.484500 988 2507 2 chr2D.!!$F5 1519
10 TraesCS5D01G307500 chr2A 446997993 446999614 1621 False 927.0 1227 88.613500 988 2602 2 chr2A.!!$F1 1614
11 TraesCS5D01G307500 chr3B 811504836 811505822 986 True 977.0 977 84.763000 1001 1978 1 chr3B.!!$R1 977
12 TraesCS5D01G307500 chr2B 404183976 404184521 545 False 569.0 569 85.818000 2064 2602 1 chr2B.!!$F1 538

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
746 748 0.031043 CGCCCCATGTACGATCGTTA 59.969 55.0 27.88 16.33 0.0 3.18 F
791 793 1.030457 CGCATTACTCCTACCCGTCT 58.970 55.0 0.00 0.00 0.0 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2573 4298 0.178967 TTGGCAGCATTGTCCTTGGA 60.179 50.0 0.00 0.00 0.00 3.53 R
2616 4341 1.092348 TACTCCACGACGAGTCATGG 58.908 55.0 11.67 11.67 43.75 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 2.877043 CGGGTTACGCCAGTAGTTAT 57.123 50.000 0.00 0.00 39.65 1.89
39 40 3.988379 CGGGTTACGCCAGTAGTTATA 57.012 47.619 0.00 0.00 39.65 0.98
40 41 4.510038 CGGGTTACGCCAGTAGTTATAT 57.490 45.455 0.00 0.00 39.65 0.86
41 42 4.479619 CGGGTTACGCCAGTAGTTATATC 58.520 47.826 0.00 0.00 39.65 1.63
42 43 4.616835 CGGGTTACGCCAGTAGTTATATCC 60.617 50.000 0.00 0.00 39.65 2.59
43 44 4.322273 GGGTTACGCCAGTAGTTATATCCC 60.322 50.000 0.00 0.00 39.65 3.85
44 45 4.322273 GGTTACGCCAGTAGTTATATCCCC 60.322 50.000 0.00 0.00 37.17 4.81
45 46 2.966915 ACGCCAGTAGTTATATCCCCA 58.033 47.619 0.00 0.00 0.00 4.96
46 47 3.311091 ACGCCAGTAGTTATATCCCCAA 58.689 45.455 0.00 0.00 0.00 4.12
47 48 3.070590 ACGCCAGTAGTTATATCCCCAAC 59.929 47.826 0.00 0.00 0.00 3.77
48 49 3.070446 CGCCAGTAGTTATATCCCCAACA 59.930 47.826 0.00 0.00 0.00 3.33
49 50 4.443739 CGCCAGTAGTTATATCCCCAACAA 60.444 45.833 0.00 0.00 0.00 2.83
50 51 5.063880 GCCAGTAGTTATATCCCCAACAAG 58.936 45.833 0.00 0.00 0.00 3.16
51 52 5.163237 GCCAGTAGTTATATCCCCAACAAGA 60.163 44.000 0.00 0.00 0.00 3.02
52 53 6.289064 CCAGTAGTTATATCCCCAACAAGAC 58.711 44.000 0.00 0.00 0.00 3.01
53 54 6.289064 CAGTAGTTATATCCCCAACAAGACC 58.711 44.000 0.00 0.00 0.00 3.85
54 55 5.968167 AGTAGTTATATCCCCAACAAGACCA 59.032 40.000 0.00 0.00 0.00 4.02
55 56 5.994416 AGTTATATCCCCAACAAGACCAT 57.006 39.130 0.00 0.00 0.00 3.55
56 57 7.792736 AGTAGTTATATCCCCAACAAGACCATA 59.207 37.037 0.00 0.00 0.00 2.74
57 58 6.838382 AGTTATATCCCCAACAAGACCATAC 58.162 40.000 0.00 0.00 0.00 2.39
58 59 6.388689 AGTTATATCCCCAACAAGACCATACA 59.611 38.462 0.00 0.00 0.00 2.29
59 60 5.930209 ATATCCCCAACAAGACCATACAT 57.070 39.130 0.00 0.00 0.00 2.29
60 61 3.364460 TCCCCAACAAGACCATACATG 57.636 47.619 0.00 0.00 0.00 3.21
80 81 2.407268 CAACAGCTGCAGTTGTCCA 58.593 52.632 32.48 0.00 41.00 4.02
81 82 0.740149 CAACAGCTGCAGTTGTCCAA 59.260 50.000 32.48 0.00 41.00 3.53
82 83 1.134753 CAACAGCTGCAGTTGTCCAAA 59.865 47.619 32.48 0.00 41.00 3.28
83 84 1.473258 ACAGCTGCAGTTGTCCAAAA 58.527 45.000 28.17 0.00 34.29 2.44
84 85 2.034124 ACAGCTGCAGTTGTCCAAAAT 58.966 42.857 28.17 6.09 34.29 1.82
85 86 2.223876 ACAGCTGCAGTTGTCCAAAATG 60.224 45.455 28.17 3.89 34.29 2.32
86 87 1.342174 AGCTGCAGTTGTCCAAAATGG 59.658 47.619 16.64 0.00 39.43 3.16
87 88 1.787012 CTGCAGTTGTCCAAAATGGC 58.213 50.000 5.25 0.00 37.47 4.40
88 89 1.068895 CTGCAGTTGTCCAAAATGGCA 59.931 47.619 5.25 0.00 37.47 4.92
89 90 1.693062 TGCAGTTGTCCAAAATGGCAT 59.307 42.857 0.00 0.00 37.47 4.40
90 91 2.288948 TGCAGTTGTCCAAAATGGCATC 60.289 45.455 0.00 0.00 37.47 3.91
91 92 2.028748 GCAGTTGTCCAAAATGGCATCT 60.029 45.455 0.00 0.00 37.47 2.90
92 93 3.581755 CAGTTGTCCAAAATGGCATCTG 58.418 45.455 0.00 1.18 37.47 2.90
93 94 2.564062 AGTTGTCCAAAATGGCATCTGG 59.436 45.455 18.18 18.18 37.47 3.86
94 95 0.896923 TGTCCAAAATGGCATCTGGC 59.103 50.000 19.06 15.25 37.47 4.85
101 102 4.402851 TGGCATCTGGCACTTGAC 57.597 55.556 1.83 0.00 46.12 3.18
102 103 1.303561 TGGCATCTGGCACTTGACC 60.304 57.895 1.83 0.00 46.12 4.02
103 104 1.782201 TGGCATCTGGCACTTGACCT 61.782 55.000 1.83 0.00 46.12 3.85
104 105 2.454676 TGGCATCTGGCACTTGACCTA 61.455 52.381 1.83 0.00 46.12 3.08
105 106 2.113860 GCATCTGGCACTTGACCTAA 57.886 50.000 0.00 0.00 43.97 2.69
106 107 2.012673 GCATCTGGCACTTGACCTAAG 58.987 52.381 0.00 0.00 43.97 2.18
107 108 2.355108 GCATCTGGCACTTGACCTAAGA 60.355 50.000 0.00 0.00 43.97 2.10
108 109 3.683847 GCATCTGGCACTTGACCTAAGAT 60.684 47.826 0.00 0.00 43.97 2.40
109 110 3.616956 TCTGGCACTTGACCTAAGATG 57.383 47.619 0.00 0.00 39.76 2.90
110 111 3.173151 TCTGGCACTTGACCTAAGATGA 58.827 45.455 0.00 0.00 39.76 2.92
111 112 3.055819 TCTGGCACTTGACCTAAGATGAC 60.056 47.826 0.00 0.00 39.76 3.06
112 113 2.637382 TGGCACTTGACCTAAGATGACA 59.363 45.455 0.00 0.00 39.76 3.58
113 114 3.072330 TGGCACTTGACCTAAGATGACAA 59.928 43.478 0.00 0.00 39.76 3.18
114 115 3.437049 GGCACTTGACCTAAGATGACAAC 59.563 47.826 0.00 0.00 39.76 3.32
115 116 4.319177 GCACTTGACCTAAGATGACAACT 58.681 43.478 0.00 0.00 39.76 3.16
116 117 4.153117 GCACTTGACCTAAGATGACAACTG 59.847 45.833 0.00 0.00 39.76 3.16
117 118 4.153117 CACTTGACCTAAGATGACAACTGC 59.847 45.833 0.00 0.00 39.76 4.40
118 119 4.202357 ACTTGACCTAAGATGACAACTGCA 60.202 41.667 0.00 0.00 39.76 4.41
119 120 3.930336 TGACCTAAGATGACAACTGCAG 58.070 45.455 13.48 13.48 0.00 4.41
120 121 3.324846 TGACCTAAGATGACAACTGCAGT 59.675 43.478 15.25 15.25 0.00 4.40
121 122 4.202357 TGACCTAAGATGACAACTGCAGTT 60.202 41.667 26.36 26.36 39.12 3.16
130 131 3.189568 AACTGCAGTTGAGCAACCA 57.810 47.368 30.66 1.68 45.13 3.67
131 132 1.696063 AACTGCAGTTGAGCAACCAT 58.304 45.000 30.66 2.58 45.13 3.55
132 133 0.956633 ACTGCAGTTGAGCAACCATG 59.043 50.000 15.25 4.34 45.13 3.66
133 134 0.242825 CTGCAGTTGAGCAACCATGG 59.757 55.000 11.19 11.19 45.13 3.66
134 135 1.080298 GCAGTTGAGCAACCATGGC 60.080 57.895 13.04 0.00 42.06 4.40
135 136 1.808531 GCAGTTGAGCAACCATGGCA 61.809 55.000 13.04 0.00 42.06 4.92
136 137 0.675083 CAGTTGAGCAACCATGGCAA 59.325 50.000 13.04 4.49 42.06 4.52
137 138 0.675633 AGTTGAGCAACCATGGCAAC 59.324 50.000 19.02 19.02 42.06 4.17
138 139 0.675633 GTTGAGCAACCATGGCAACT 59.324 50.000 19.25 11.63 36.73 3.16
139 140 0.675083 TTGAGCAACCATGGCAACTG 59.325 50.000 13.04 5.49 37.61 3.16
140 141 0.467844 TGAGCAACCATGGCAACTGT 60.468 50.000 13.04 0.00 37.61 3.55
141 142 1.202867 TGAGCAACCATGGCAACTGTA 60.203 47.619 13.04 0.00 37.61 2.74
142 143 1.470098 GAGCAACCATGGCAACTGTAG 59.530 52.381 13.04 0.00 37.61 2.74
143 144 1.202927 AGCAACCATGGCAACTGTAGT 60.203 47.619 13.04 0.00 37.61 2.73
144 145 1.613437 GCAACCATGGCAACTGTAGTT 59.387 47.619 13.04 0.00 39.12 2.24
155 156 2.743636 ACTGTAGTTGTCCGACATGG 57.256 50.000 1.09 0.00 40.09 3.66
156 157 1.337823 ACTGTAGTTGTCCGACATGGC 60.338 52.381 1.09 0.00 37.80 4.40
157 158 0.682292 TGTAGTTGTCCGACATGGCA 59.318 50.000 1.09 0.00 37.80 4.92
158 159 1.070914 TGTAGTTGTCCGACATGGCAA 59.929 47.619 1.09 0.00 37.80 4.52
159 160 1.463444 GTAGTTGTCCGACATGGCAAC 59.537 52.381 1.09 5.44 46.38 4.17
160 161 2.629002 GTTGTCCGACATGGCAACT 58.371 52.632 1.09 0.00 44.47 3.16
161 162 0.951558 GTTGTCCGACATGGCAACTT 59.048 50.000 1.09 0.00 44.47 2.66
162 163 1.336755 GTTGTCCGACATGGCAACTTT 59.663 47.619 1.09 0.00 44.47 2.66
163 164 2.550606 GTTGTCCGACATGGCAACTTTA 59.449 45.455 1.09 0.00 44.47 1.85
164 165 2.422597 TGTCCGACATGGCAACTTTAG 58.577 47.619 0.00 0.00 37.80 1.85
165 166 2.224426 TGTCCGACATGGCAACTTTAGT 60.224 45.455 0.00 0.00 37.80 2.24
166 167 2.812011 GTCCGACATGGCAACTTTAGTT 59.188 45.455 0.00 0.00 37.80 2.24
167 168 3.071479 TCCGACATGGCAACTTTAGTTC 58.929 45.455 0.00 0.00 37.80 3.01
168 169 2.811431 CCGACATGGCAACTTTAGTTCA 59.189 45.455 0.00 0.00 35.83 3.18
169 170 3.120199 CCGACATGGCAACTTTAGTTCAG 60.120 47.826 0.00 0.00 35.83 3.02
170 171 3.667960 CGACATGGCAACTTTAGTTCAGC 60.668 47.826 0.00 0.00 35.83 4.26
171 172 2.226437 ACATGGCAACTTTAGTTCAGCG 59.774 45.455 0.00 0.00 35.83 5.18
172 173 2.248280 TGGCAACTTTAGTTCAGCGA 57.752 45.000 0.00 0.00 35.83 4.93
173 174 1.871039 TGGCAACTTTAGTTCAGCGAC 59.129 47.619 0.00 0.00 35.83 5.19
174 175 1.871039 GGCAACTTTAGTTCAGCGACA 59.129 47.619 0.00 0.00 35.83 4.35
175 176 2.484264 GGCAACTTTAGTTCAGCGACAT 59.516 45.455 0.00 0.00 35.83 3.06
176 177 3.482786 GCAACTTTAGTTCAGCGACATG 58.517 45.455 0.00 0.00 35.83 3.21
177 178 3.667960 GCAACTTTAGTTCAGCGACATGG 60.668 47.826 0.00 0.00 35.83 3.66
178 179 2.076863 ACTTTAGTTCAGCGACATGGC 58.923 47.619 0.00 0.00 0.00 4.40
179 180 2.076100 CTTTAGTTCAGCGACATGGCA 58.924 47.619 0.00 0.00 34.64 4.92
180 181 2.177394 TTAGTTCAGCGACATGGCAA 57.823 45.000 0.00 0.00 34.64 4.52
181 182 1.438651 TAGTTCAGCGACATGGCAAC 58.561 50.000 0.00 0.00 34.64 4.17
182 183 0.250467 AGTTCAGCGACATGGCAACT 60.250 50.000 0.00 0.00 34.64 3.16
183 184 0.110056 GTTCAGCGACATGGCAACTG 60.110 55.000 11.56 11.56 34.64 3.16
184 185 1.855213 TTCAGCGACATGGCAACTGC 61.855 55.000 12.73 0.88 41.14 4.40
185 186 2.281692 AGCGACATGGCAACTGCA 60.282 55.556 0.00 0.00 44.36 4.41
186 187 2.177531 GCGACATGGCAACTGCAG 59.822 61.111 13.48 13.48 44.36 4.41
187 188 2.620112 GCGACATGGCAACTGCAGT 61.620 57.895 15.25 15.25 44.36 4.40
188 189 1.951510 CGACATGGCAACTGCAGTT 59.048 52.632 26.36 26.36 44.36 3.16
189 190 1.155889 CGACATGGCAACTGCAGTTA 58.844 50.000 30.67 16.98 44.36 2.24
190 191 1.535028 CGACATGGCAACTGCAGTTAA 59.465 47.619 30.67 19.43 44.36 2.01
191 192 2.031245 CGACATGGCAACTGCAGTTAAA 60.031 45.455 30.67 19.09 44.36 1.52
192 193 3.308530 GACATGGCAACTGCAGTTAAAC 58.691 45.455 30.67 22.27 44.36 2.01
193 194 2.287547 ACATGGCAACTGCAGTTAAACG 60.288 45.455 30.67 19.41 44.36 3.60
194 195 0.665835 TGGCAACTGCAGTTAAACGG 59.334 50.000 30.67 19.05 44.36 4.44
195 196 0.948678 GGCAACTGCAGTTAAACGGA 59.051 50.000 30.67 0.00 44.36 4.69
196 197 1.334689 GGCAACTGCAGTTAAACGGAC 60.335 52.381 30.67 17.21 44.36 4.79
197 198 1.332375 GCAACTGCAGTTAAACGGACA 59.668 47.619 30.67 0.00 41.59 4.02
198 199 2.031157 GCAACTGCAGTTAAACGGACAT 60.031 45.455 30.67 2.88 41.59 3.06
199 200 3.550030 GCAACTGCAGTTAAACGGACATT 60.550 43.478 30.67 2.31 41.59 2.71
200 201 3.896648 ACTGCAGTTAAACGGACATTG 57.103 42.857 15.25 0.00 0.00 2.82
201 202 3.472652 ACTGCAGTTAAACGGACATTGA 58.527 40.909 15.25 0.00 0.00 2.57
202 203 3.880490 ACTGCAGTTAAACGGACATTGAA 59.120 39.130 15.25 0.00 0.00 2.69
203 204 4.024048 ACTGCAGTTAAACGGACATTGAAG 60.024 41.667 15.25 0.00 0.00 3.02
204 205 4.130857 TGCAGTTAAACGGACATTGAAGA 58.869 39.130 0.00 0.00 0.00 2.87
205 206 4.213270 TGCAGTTAAACGGACATTGAAGAG 59.787 41.667 0.00 0.00 0.00 2.85
206 207 4.378459 GCAGTTAAACGGACATTGAAGAGG 60.378 45.833 0.00 0.00 0.00 3.69
207 208 4.154195 CAGTTAAACGGACATTGAAGAGGG 59.846 45.833 0.00 0.00 0.00 4.30
208 209 2.951229 AAACGGACATTGAAGAGGGT 57.049 45.000 0.00 0.00 0.00 4.34
209 210 2.474410 AACGGACATTGAAGAGGGTC 57.526 50.000 0.00 0.00 0.00 4.46
210 211 0.613777 ACGGACATTGAAGAGGGTCC 59.386 55.000 0.00 0.00 44.97 4.46
214 215 2.979240 GACATTGAAGAGGGTCCAGAC 58.021 52.381 0.00 0.00 0.00 3.51
226 227 3.443045 CCAGACCATGGCAACGGC 61.443 66.667 13.04 0.00 43.83 5.68
227 228 3.803082 CAGACCATGGCAACGGCG 61.803 66.667 13.04 4.80 42.47 6.46
245 246 4.295119 GGGACGCGTGGTGACTGT 62.295 66.667 20.70 0.00 0.00 3.55
246 247 2.733593 GGACGCGTGGTGACTGTC 60.734 66.667 20.70 0.00 0.00 3.51
247 248 2.027024 GACGCGTGGTGACTGTCA 59.973 61.111 20.70 6.36 0.00 3.58
248 249 2.279252 ACGCGTGGTGACTGTCAC 60.279 61.111 28.29 28.29 46.23 3.67
282 283 3.694746 CGTGAGGTAGGTGGCTGA 58.305 61.111 0.00 0.00 0.00 4.26
283 284 1.513158 CGTGAGGTAGGTGGCTGAG 59.487 63.158 0.00 0.00 0.00 3.35
284 285 0.965866 CGTGAGGTAGGTGGCTGAGA 60.966 60.000 0.00 0.00 0.00 3.27
285 286 0.820871 GTGAGGTAGGTGGCTGAGAG 59.179 60.000 0.00 0.00 0.00 3.20
286 287 0.704664 TGAGGTAGGTGGCTGAGAGA 59.295 55.000 0.00 0.00 0.00 3.10
287 288 1.341482 TGAGGTAGGTGGCTGAGAGAG 60.341 57.143 0.00 0.00 0.00 3.20
288 289 0.707616 AGGTAGGTGGCTGAGAGAGT 59.292 55.000 0.00 0.00 0.00 3.24
289 290 1.077993 AGGTAGGTGGCTGAGAGAGTT 59.922 52.381 0.00 0.00 0.00 3.01
290 291 1.478916 GGTAGGTGGCTGAGAGAGTTC 59.521 57.143 0.00 0.00 0.00 3.01
291 292 1.133407 GTAGGTGGCTGAGAGAGTTCG 59.867 57.143 0.00 0.00 0.00 3.95
292 293 0.540830 AGGTGGCTGAGAGAGTTCGT 60.541 55.000 0.00 0.00 0.00 3.85
293 294 0.389166 GGTGGCTGAGAGAGTTCGTG 60.389 60.000 0.00 0.00 0.00 4.35
294 295 0.315568 GTGGCTGAGAGAGTTCGTGT 59.684 55.000 0.00 0.00 0.00 4.49
295 296 0.315251 TGGCTGAGAGAGTTCGTGTG 59.685 55.000 0.00 0.00 0.00 3.82
296 297 0.389166 GGCTGAGAGAGTTCGTGTGG 60.389 60.000 0.00 0.00 0.00 4.17
297 298 0.598562 GCTGAGAGAGTTCGTGTGGA 59.401 55.000 0.00 0.00 0.00 4.02
298 299 1.203523 GCTGAGAGAGTTCGTGTGGAT 59.796 52.381 0.00 0.00 0.00 3.41
299 300 2.873609 CTGAGAGAGTTCGTGTGGATG 58.126 52.381 0.00 0.00 0.00 3.51
300 301 2.230025 CTGAGAGAGTTCGTGTGGATGT 59.770 50.000 0.00 0.00 0.00 3.06
301 302 2.628178 TGAGAGAGTTCGTGTGGATGTT 59.372 45.455 0.00 0.00 0.00 2.71
302 303 3.824443 TGAGAGAGTTCGTGTGGATGTTA 59.176 43.478 0.00 0.00 0.00 2.41
303 304 4.462834 TGAGAGAGTTCGTGTGGATGTTAT 59.537 41.667 0.00 0.00 0.00 1.89
304 305 4.748892 AGAGAGTTCGTGTGGATGTTATG 58.251 43.478 0.00 0.00 0.00 1.90
305 306 3.262420 AGAGTTCGTGTGGATGTTATGC 58.738 45.455 0.00 0.00 0.00 3.14
306 307 3.055819 AGAGTTCGTGTGGATGTTATGCT 60.056 43.478 0.00 0.00 0.00 3.79
307 308 3.674997 AGTTCGTGTGGATGTTATGCTT 58.325 40.909 0.00 0.00 0.00 3.91
308 309 4.072131 AGTTCGTGTGGATGTTATGCTTT 58.928 39.130 0.00 0.00 0.00 3.51
309 310 4.518970 AGTTCGTGTGGATGTTATGCTTTT 59.481 37.500 0.00 0.00 0.00 2.27
310 311 5.009610 AGTTCGTGTGGATGTTATGCTTTTT 59.990 36.000 0.00 0.00 0.00 1.94
311 312 4.793071 TCGTGTGGATGTTATGCTTTTTG 58.207 39.130 0.00 0.00 0.00 2.44
312 313 3.364621 CGTGTGGATGTTATGCTTTTTGC 59.635 43.478 0.00 0.00 43.25 3.68
313 314 3.679502 GTGTGGATGTTATGCTTTTTGCC 59.320 43.478 0.00 0.00 42.00 4.52
314 315 3.261580 GTGGATGTTATGCTTTTTGCCC 58.738 45.455 0.00 0.00 42.00 5.36
315 316 2.902486 TGGATGTTATGCTTTTTGCCCA 59.098 40.909 0.00 0.00 42.00 5.36
316 317 3.261580 GGATGTTATGCTTTTTGCCCAC 58.738 45.455 0.00 0.00 42.00 4.61
317 318 3.306641 GGATGTTATGCTTTTTGCCCACA 60.307 43.478 0.00 0.00 42.00 4.17
318 319 3.104843 TGTTATGCTTTTTGCCCACAC 57.895 42.857 0.00 0.00 42.00 3.82
319 320 2.432146 TGTTATGCTTTTTGCCCACACA 59.568 40.909 0.00 0.00 42.00 3.72
320 321 3.070734 TGTTATGCTTTTTGCCCACACAT 59.929 39.130 0.00 0.00 42.00 3.21
321 322 4.281941 TGTTATGCTTTTTGCCCACACATA 59.718 37.500 0.00 0.00 42.00 2.29
322 323 3.598019 ATGCTTTTTGCCCACACATAG 57.402 42.857 0.00 0.00 42.00 2.23
323 324 1.617850 TGCTTTTTGCCCACACATAGG 59.382 47.619 0.00 0.00 42.00 2.57
335 336 2.202866 ACATAGGCGTGTGAGAGGG 58.797 57.895 10.28 0.00 0.00 4.30
336 337 0.324368 ACATAGGCGTGTGAGAGGGA 60.324 55.000 10.28 0.00 0.00 4.20
337 338 1.043816 CATAGGCGTGTGAGAGGGAT 58.956 55.000 0.00 0.00 0.00 3.85
338 339 1.000283 CATAGGCGTGTGAGAGGGATC 60.000 57.143 0.00 0.00 0.00 3.36
339 340 1.101635 TAGGCGTGTGAGAGGGATCG 61.102 60.000 0.00 0.00 0.00 3.69
340 341 2.583593 GCGTGTGAGAGGGATCGC 60.584 66.667 0.54 0.54 37.17 4.58
341 342 2.885113 CGTGTGAGAGGGATCGCA 59.115 61.111 12.83 0.00 37.37 5.10
342 343 1.215382 CGTGTGAGAGGGATCGCAA 59.785 57.895 12.83 0.00 41.12 4.85
343 344 0.803768 CGTGTGAGAGGGATCGCAAG 60.804 60.000 12.83 0.00 41.12 4.01
366 367 2.414750 AAAAAGAGGCGTGTGGGTG 58.585 52.632 0.00 0.00 0.00 4.61
367 368 1.734388 AAAAAGAGGCGTGTGGGTGC 61.734 55.000 0.00 0.00 0.00 5.01
368 369 2.624674 AAAAGAGGCGTGTGGGTGCT 62.625 55.000 0.00 0.00 0.00 4.40
369 370 1.764571 AAAGAGGCGTGTGGGTGCTA 61.765 55.000 0.00 0.00 0.00 3.49
370 371 2.125512 GAGGCGTGTGGGTGCTAG 60.126 66.667 0.00 0.00 0.00 3.42
371 372 2.923035 AGGCGTGTGGGTGCTAGT 60.923 61.111 0.00 0.00 0.00 2.57
372 373 2.032071 GGCGTGTGGGTGCTAGTT 59.968 61.111 0.00 0.00 0.00 2.24
373 374 2.325082 GGCGTGTGGGTGCTAGTTG 61.325 63.158 0.00 0.00 0.00 3.16
374 375 1.597027 GCGTGTGGGTGCTAGTTGT 60.597 57.895 0.00 0.00 0.00 3.32
375 376 1.164041 GCGTGTGGGTGCTAGTTGTT 61.164 55.000 0.00 0.00 0.00 2.83
376 377 1.305201 CGTGTGGGTGCTAGTTGTTT 58.695 50.000 0.00 0.00 0.00 2.83
377 378 1.673920 CGTGTGGGTGCTAGTTGTTTT 59.326 47.619 0.00 0.00 0.00 2.43
378 379 2.540769 CGTGTGGGTGCTAGTTGTTTTG 60.541 50.000 0.00 0.00 0.00 2.44
379 380 1.407258 TGTGGGTGCTAGTTGTTTTGC 59.593 47.619 0.00 0.00 0.00 3.68
380 381 1.036707 TGGGTGCTAGTTGTTTTGCC 58.963 50.000 0.00 0.00 0.00 4.52
381 382 0.317160 GGGTGCTAGTTGTTTTGCCC 59.683 55.000 0.00 0.00 0.00 5.36
382 383 1.036707 GGTGCTAGTTGTTTTGCCCA 58.963 50.000 0.00 0.00 0.00 5.36
383 384 1.269569 GGTGCTAGTTGTTTTGCCCAC 60.270 52.381 0.00 0.00 0.00 4.61
384 385 1.407258 GTGCTAGTTGTTTTGCCCACA 59.593 47.619 0.00 0.00 0.00 4.17
385 386 1.407258 TGCTAGTTGTTTTGCCCACAC 59.593 47.619 0.00 0.00 0.00 3.82
386 387 1.599419 GCTAGTTGTTTTGCCCACACG 60.599 52.381 0.00 0.00 0.00 4.49
387 388 1.673920 CTAGTTGTTTTGCCCACACGT 59.326 47.619 0.00 0.00 0.00 4.49
388 389 1.752683 AGTTGTTTTGCCCACACGTA 58.247 45.000 0.00 0.00 0.00 3.57
389 390 1.673920 AGTTGTTTTGCCCACACGTAG 59.326 47.619 0.00 0.00 0.00 3.51
390 391 1.025812 TTGTTTTGCCCACACGTAGG 58.974 50.000 0.00 0.00 0.00 3.18
408 409 3.314331 CGTGTGGGCTGGTCCTCT 61.314 66.667 0.00 0.00 34.39 3.69
409 410 2.883828 CGTGTGGGCTGGTCCTCTT 61.884 63.158 0.00 0.00 34.39 2.85
410 411 1.541310 CGTGTGGGCTGGTCCTCTTA 61.541 60.000 0.00 0.00 34.39 2.10
411 412 0.250513 GTGTGGGCTGGTCCTCTTAG 59.749 60.000 0.00 0.00 34.39 2.18
412 413 0.116342 TGTGGGCTGGTCCTCTTAGA 59.884 55.000 0.00 0.00 34.39 2.10
413 414 0.537653 GTGGGCTGGTCCTCTTAGAC 59.462 60.000 0.00 0.00 35.95 2.59
414 415 0.116342 TGGGCTGGTCCTCTTAGACA 59.884 55.000 0.00 0.00 38.59 3.41
415 416 0.537653 GGGCTGGTCCTCTTAGACAC 59.462 60.000 0.00 0.00 38.59 3.67
416 417 0.537653 GGCTGGTCCTCTTAGACACC 59.462 60.000 0.00 0.00 38.59 4.16
417 418 1.267121 GCTGGTCCTCTTAGACACCA 58.733 55.000 7.77 7.77 38.59 4.17
418 419 1.066787 GCTGGTCCTCTTAGACACCAC 60.067 57.143 4.60 0.59 38.59 4.16
419 420 2.248248 CTGGTCCTCTTAGACACCACA 58.752 52.381 4.60 0.00 38.59 4.17
420 421 1.968493 TGGTCCTCTTAGACACCACAC 59.032 52.381 4.60 0.00 38.59 3.82
421 422 1.968493 GGTCCTCTTAGACACCACACA 59.032 52.381 1.70 0.00 38.59 3.72
422 423 2.367567 GGTCCTCTTAGACACCACACAA 59.632 50.000 1.70 0.00 38.59 3.33
423 424 3.181458 GGTCCTCTTAGACACCACACAAA 60.181 47.826 1.70 0.00 38.59 2.83
424 425 4.448210 GTCCTCTTAGACACCACACAAAA 58.552 43.478 0.00 0.00 36.73 2.44
425 426 5.063880 GTCCTCTTAGACACCACACAAAAT 58.936 41.667 0.00 0.00 36.73 1.82
426 427 5.049405 GTCCTCTTAGACACCACACAAAATG 60.049 44.000 0.00 0.00 36.73 2.32
427 428 4.821805 CCTCTTAGACACCACACAAAATGT 59.178 41.667 0.00 0.00 44.81 2.71
428 429 9.319404 GTCCTCTTAGACACCACACAAAATGTG 62.319 44.444 8.85 8.85 45.67 3.21
438 439 1.039856 ACAAAATGTGTGGGCAGACC 58.960 50.000 0.00 0.00 39.72 3.85
448 449 2.437895 GGCAGACCCCTTAACGCC 60.438 66.667 0.00 0.00 0.00 5.68
449 450 2.437895 GCAGACCCCTTAACGCCC 60.438 66.667 0.00 0.00 0.00 6.13
450 451 3.074281 CAGACCCCTTAACGCCCA 58.926 61.111 0.00 0.00 0.00 5.36
451 452 1.376812 CAGACCCCTTAACGCCCAC 60.377 63.158 0.00 0.00 0.00 4.61
452 453 1.844289 AGACCCCTTAACGCCCACA 60.844 57.895 0.00 0.00 0.00 4.17
453 454 1.673337 GACCCCTTAACGCCCACAC 60.673 63.158 0.00 0.00 0.00 3.82
454 455 2.744709 CCCCTTAACGCCCACACG 60.745 66.667 0.00 0.00 39.50 4.49
468 469 0.438445 CACACGTGTGGCAGTTATCG 59.562 55.000 35.65 10.61 42.10 2.92
469 470 0.032952 ACACGTGTGGCAGTTATCGT 59.967 50.000 22.71 0.00 34.19 3.73
470 471 0.713883 CACGTGTGGCAGTTATCGTC 59.286 55.000 7.58 0.00 0.00 4.20
471 472 0.731514 ACGTGTGGCAGTTATCGTCG 60.732 55.000 0.00 0.00 0.00 5.12
472 473 0.731514 CGTGTGGCAGTTATCGTCGT 60.732 55.000 0.00 0.00 0.00 4.34
473 474 0.989890 GTGTGGCAGTTATCGTCGTC 59.010 55.000 0.00 0.00 0.00 4.20
474 475 0.108992 TGTGGCAGTTATCGTCGTCC 60.109 55.000 0.00 0.00 0.00 4.79
475 476 0.172803 GTGGCAGTTATCGTCGTCCT 59.827 55.000 0.00 0.00 0.00 3.85
476 477 0.892755 TGGCAGTTATCGTCGTCCTT 59.107 50.000 0.00 0.00 0.00 3.36
477 478 1.274167 TGGCAGTTATCGTCGTCCTTT 59.726 47.619 0.00 0.00 0.00 3.11
478 479 1.659098 GGCAGTTATCGTCGTCCTTTG 59.341 52.381 0.00 0.00 0.00 2.77
479 480 2.602878 GCAGTTATCGTCGTCCTTTGA 58.397 47.619 0.00 0.00 0.00 2.69
480 481 2.991190 GCAGTTATCGTCGTCCTTTGAA 59.009 45.455 0.00 0.00 0.00 2.69
481 482 3.430895 GCAGTTATCGTCGTCCTTTGAAA 59.569 43.478 0.00 0.00 0.00 2.69
482 483 4.084223 GCAGTTATCGTCGTCCTTTGAAAA 60.084 41.667 0.00 0.00 0.00 2.29
483 484 5.390567 GCAGTTATCGTCGTCCTTTGAAAAT 60.391 40.000 0.00 0.00 0.00 1.82
484 485 6.599437 CAGTTATCGTCGTCCTTTGAAAATT 58.401 36.000 0.00 0.00 0.00 1.82
485 486 6.736853 CAGTTATCGTCGTCCTTTGAAAATTC 59.263 38.462 0.00 0.00 0.00 2.17
486 487 4.680171 ATCGTCGTCCTTTGAAAATTCC 57.320 40.909 0.00 0.00 0.00 3.01
487 488 3.468770 TCGTCGTCCTTTGAAAATTCCA 58.531 40.909 0.00 0.00 0.00 3.53
488 489 3.878103 TCGTCGTCCTTTGAAAATTCCAA 59.122 39.130 0.00 0.00 0.00 3.53
489 490 4.335874 TCGTCGTCCTTTGAAAATTCCAAA 59.664 37.500 0.00 6.02 33.12 3.28
490 491 4.675114 CGTCGTCCTTTGAAAATTCCAAAG 59.325 41.667 18.81 18.81 45.99 2.77
491 492 5.588240 GTCGTCCTTTGAAAATTCCAAAGT 58.412 37.500 21.64 0.00 45.35 2.66
492 493 6.040247 GTCGTCCTTTGAAAATTCCAAAGTT 58.960 36.000 21.64 0.00 45.35 2.66
493 494 6.019881 GTCGTCCTTTGAAAATTCCAAAGTTG 60.020 38.462 21.64 14.86 45.35 3.16
494 495 5.810074 CGTCCTTTGAAAATTCCAAAGTTGT 59.190 36.000 21.64 0.00 45.35 3.32
495 496 6.312672 CGTCCTTTGAAAATTCCAAAGTTGTT 59.687 34.615 21.64 0.00 45.35 2.83
496 497 7.148490 CGTCCTTTGAAAATTCCAAAGTTGTTT 60.148 33.333 21.64 0.00 45.35 2.83
497 498 8.511321 GTCCTTTGAAAATTCCAAAGTTGTTTT 58.489 29.630 21.64 0.00 45.35 2.43
498 499 8.726068 TCCTTTGAAAATTCCAAAGTTGTTTTC 58.274 29.630 21.64 9.64 45.35 2.29
499 500 8.510505 CCTTTGAAAATTCCAAAGTTGTTTTCA 58.489 29.630 21.64 13.05 45.35 2.69
522 523 9.854668 TTCAATAAAATATAAAGGACCATCCGA 57.145 29.630 0.00 0.00 42.75 4.55
523 524 9.854668 TCAATAAAATATAAAGGACCATCCGAA 57.145 29.630 0.00 0.00 42.75 4.30
578 579 2.667969 GCTAAAAAGCCTGGCAAAATCG 59.332 45.455 22.65 6.06 0.00 3.34
579 580 2.168326 AAAAAGCCTGGCAAAATCGG 57.832 45.000 22.65 0.00 0.00 4.18
580 581 0.320683 AAAAGCCTGGCAAAATCGGC 60.321 50.000 22.65 6.60 42.79 5.54
581 582 1.470996 AAAGCCTGGCAAAATCGGCA 61.471 50.000 22.65 0.00 44.85 5.69
585 586 2.671276 TGGCAAAATCGGCAGCGA 60.671 55.556 0.00 0.00 36.38 4.93
586 587 2.264461 TGGCAAAATCGGCAGCGAA 61.264 52.632 0.00 0.00 36.38 4.70
587 588 1.801512 GGCAAAATCGGCAGCGAAC 60.802 57.895 0.00 0.00 0.00 3.95
588 589 1.081509 GCAAAATCGGCAGCGAACA 60.082 52.632 0.00 0.00 0.00 3.18
589 590 1.067199 GCAAAATCGGCAGCGAACAG 61.067 55.000 0.00 0.00 0.00 3.16
590 591 0.454957 CAAAATCGGCAGCGAACAGG 60.455 55.000 0.00 0.00 0.00 4.00
591 592 2.200170 AAAATCGGCAGCGAACAGGC 62.200 55.000 0.00 0.00 0.00 4.85
599 600 4.789075 GCGAACAGGCGACCGCTA 62.789 66.667 14.25 0.00 43.75 4.26
600 601 2.126228 CGAACAGGCGACCGCTAA 60.126 61.111 14.25 0.00 41.60 3.09
601 602 1.518572 CGAACAGGCGACCGCTAAT 60.519 57.895 14.25 0.00 41.60 1.73
602 603 1.752501 CGAACAGGCGACCGCTAATG 61.753 60.000 14.25 12.41 41.60 1.90
603 604 1.429148 GAACAGGCGACCGCTAATGG 61.429 60.000 14.25 2.74 41.60 3.16
604 605 2.588877 CAGGCGACCGCTAATGGG 60.589 66.667 14.25 0.00 41.60 4.00
605 606 4.547367 AGGCGACCGCTAATGGGC 62.547 66.667 14.25 0.00 41.60 5.36
606 607 4.547367 GGCGACCGCTAATGGGCT 62.547 66.667 14.25 0.00 41.60 5.19
607 608 3.272334 GCGACCGCTAATGGGCTG 61.272 66.667 7.19 0.00 33.52 4.85
608 609 2.499205 CGACCGCTAATGGGCTGA 59.501 61.111 0.00 0.00 33.52 4.26
609 610 1.592669 CGACCGCTAATGGGCTGAG 60.593 63.158 0.00 0.00 33.52 3.35
610 611 1.227674 GACCGCTAATGGGCTGAGG 60.228 63.158 0.00 0.00 32.64 3.86
611 612 2.592861 CCGCTAATGGGCTGAGGC 60.593 66.667 0.00 0.00 37.82 4.70
621 622 3.190878 GCTGAGGCCCAACAATCG 58.809 61.111 0.00 0.00 0.00 3.34
622 623 1.675641 GCTGAGGCCCAACAATCGT 60.676 57.895 0.00 0.00 0.00 3.73
623 624 1.648467 GCTGAGGCCCAACAATCGTC 61.648 60.000 0.00 0.00 0.00 4.20
624 625 0.036010 CTGAGGCCCAACAATCGTCT 60.036 55.000 0.00 0.00 0.00 4.18
625 626 0.321564 TGAGGCCCAACAATCGTCTG 60.322 55.000 0.00 0.00 0.00 3.51
626 627 1.648467 GAGGCCCAACAATCGTCTGC 61.648 60.000 0.00 0.00 0.00 4.26
627 628 1.675641 GGCCCAACAATCGTCTGCT 60.676 57.895 0.00 0.00 0.00 4.24
628 629 0.392461 GGCCCAACAATCGTCTGCTA 60.392 55.000 0.00 0.00 0.00 3.49
629 630 1.448985 GCCCAACAATCGTCTGCTAA 58.551 50.000 0.00 0.00 0.00 3.09
630 631 1.130561 GCCCAACAATCGTCTGCTAAC 59.869 52.381 0.00 0.00 0.00 2.34
631 632 2.699954 CCCAACAATCGTCTGCTAACT 58.300 47.619 0.00 0.00 0.00 2.24
632 633 2.416547 CCCAACAATCGTCTGCTAACTG 59.583 50.000 0.00 0.00 0.00 3.16
633 634 2.416547 CCAACAATCGTCTGCTAACTGG 59.583 50.000 0.00 0.00 0.00 4.00
634 635 1.726853 ACAATCGTCTGCTAACTGGC 58.273 50.000 0.00 0.00 0.00 4.85
635 636 0.647410 CAATCGTCTGCTAACTGGCG 59.353 55.000 0.00 0.00 43.35 5.69
636 637 1.084370 AATCGTCTGCTAACTGGCGC 61.084 55.000 0.00 0.00 41.94 6.53
637 638 3.545481 CGTCTGCTAACTGGCGCG 61.545 66.667 0.00 0.00 36.05 6.86
638 639 2.432628 GTCTGCTAACTGGCGCGT 60.433 61.111 8.43 0.00 34.52 6.01
639 640 2.027625 GTCTGCTAACTGGCGCGTT 61.028 57.895 8.43 3.25 34.52 4.84
640 641 0.734942 GTCTGCTAACTGGCGCGTTA 60.735 55.000 8.43 4.42 34.52 3.18
641 642 0.038067 TCTGCTAACTGGCGCGTTAA 60.038 50.000 8.43 0.00 34.52 2.01
642 643 0.370273 CTGCTAACTGGCGCGTTAAG 59.630 55.000 8.43 5.58 34.52 1.85
643 644 1.060465 GCTAACTGGCGCGTTAAGC 59.940 57.895 8.43 2.73 43.95 3.09
654 655 3.851620 CGTTAAGCGCCGTATAGGA 57.148 52.632 2.29 0.00 45.00 2.94
655 656 1.682982 CGTTAAGCGCCGTATAGGAG 58.317 55.000 2.29 0.00 45.00 3.69
656 657 1.665161 CGTTAAGCGCCGTATAGGAGG 60.665 57.143 2.29 0.00 45.00 4.30
659 660 3.760917 GCGCCGTATAGGAGGTCT 58.239 61.111 0.00 0.00 45.00 3.85
660 661 1.580437 GCGCCGTATAGGAGGTCTC 59.420 63.158 0.00 0.00 45.00 3.36
669 670 2.039624 GGAGGTCTCCCTGCCAGA 59.960 66.667 5.73 0.00 43.12 3.86
670 671 2.363172 GGAGGTCTCCCTGCCAGAC 61.363 68.421 5.73 0.00 43.12 3.51
671 672 2.681778 AGGTCTCCCTGCCAGACG 60.682 66.667 0.00 0.00 41.20 4.18
672 673 4.459089 GGTCTCCCTGCCAGACGC 62.459 72.222 0.00 0.00 41.20 5.19
710 711 1.334869 CAACGCTCTGCTTTTGTTCCT 59.665 47.619 0.00 0.00 0.00 3.36
717 718 4.672409 CTCTGCTTTTGTTCCTTCGTTTT 58.328 39.130 0.00 0.00 0.00 2.43
718 719 5.066968 TCTGCTTTTGTTCCTTCGTTTTT 57.933 34.783 0.00 0.00 0.00 1.94
719 720 5.099575 TCTGCTTTTGTTCCTTCGTTTTTC 58.900 37.500 0.00 0.00 0.00 2.29
746 748 0.031043 CGCCCCATGTACGATCGTTA 59.969 55.000 27.88 16.33 0.00 3.18
766 768 2.587522 AGGTTCCTGGTTTTCAGCTTC 58.412 47.619 0.00 0.00 42.05 3.86
774 776 3.896122 TGGTTTTCAGCTTCATAAACGC 58.104 40.909 0.00 0.00 32.65 4.84
791 793 1.030457 CGCATTACTCCTACCCGTCT 58.970 55.000 0.00 0.00 0.00 4.18
836 838 2.433868 TTCTGATACGGCGATAAGGC 57.566 50.000 16.62 0.00 42.76 4.35
847 849 1.202268 GCGATAAGGCTGTACTCGTGT 60.202 52.381 0.00 0.00 0.00 4.49
849 851 2.194271 GATAAGGCTGTACTCGTGTGC 58.806 52.381 0.00 0.00 0.00 4.57
856 908 2.025418 GTACTCGTGTGCCCAACGG 61.025 63.158 0.00 0.00 41.34 4.44
900 955 9.842775 CGTCCCTGTTATACTCCTATATATACA 57.157 37.037 0.00 0.00 0.00 2.29
956 1012 9.168451 GGTTATCTTCTCGTCATAGATAGATCA 57.832 37.037 0.00 0.00 33.69 2.92
1117 1180 1.447314 GGGCAGCAATGCAAGAAGC 60.447 57.895 8.35 3.08 45.96 3.86
1620 1704 3.706373 GTGGGCGCCAAGGAGAGA 61.706 66.667 30.85 0.00 34.18 3.10
1941 2499 3.052082 GCCGAGCAGCTCAGCAAA 61.052 61.111 23.44 0.00 34.40 3.68
1970 2532 1.668047 GCAGTACGACACACAGGTACC 60.668 57.143 2.73 2.73 37.77 3.34
1971 2534 1.610038 CAGTACGACACACAGGTACCA 59.390 52.381 15.94 0.00 37.77 3.25
1978 3609 3.863424 CGACACACAGGTACCACATTATC 59.137 47.826 15.94 3.99 0.00 1.75
1989 3620 6.388689 AGGTACCACATTATCCATAGTTCCAA 59.611 38.462 15.94 0.00 0.00 3.53
1992 3623 6.969043 ACCACATTATCCATAGTTCCAAAGA 58.031 36.000 0.00 0.00 0.00 2.52
2043 3678 5.625150 TCTCATAGATGACCGATCTCTCAA 58.375 41.667 0.00 0.00 40.88 3.02
2066 3777 8.236586 TCAAAAATATATATTCTCGTGCATGCC 58.763 33.333 16.68 5.63 0.00 4.40
2116 3832 4.400961 AGCAGACAGAAGGCGGCC 62.401 66.667 12.11 12.11 0.00 6.13
2338 4054 4.584325 GCTCTCAGAGACTACCTCATGATT 59.416 45.833 5.62 0.00 44.40 2.57
2365 4081 1.160329 GCATGTACACGGAGATGGCC 61.160 60.000 0.00 0.00 0.00 5.36
2377 4093 4.802051 ATGGCCCGCATCAACGCT 62.802 61.111 0.00 0.00 0.00 5.07
2423 4139 4.141756 CCAAGATCAGCATCTGGAGTAACT 60.142 45.833 0.00 0.00 38.55 2.24
2569 4294 2.577059 CCGGCGTGGATGTGTACT 59.423 61.111 6.01 0.00 42.00 2.73
2573 4298 0.246635 GGCGTGGATGTGTACTCTGT 59.753 55.000 0.00 0.00 0.00 3.41
2603 4328 0.245266 TGCTGCCAACTAATCGTCGA 59.755 50.000 0.00 0.00 0.00 4.20
2609 4334 3.119424 TGCCAACTAATCGTCGATGTGTA 60.119 43.478 8.83 0.00 0.00 2.90
2610 4335 3.242248 GCCAACTAATCGTCGATGTGTAC 59.758 47.826 8.83 1.68 0.00 2.90
2611 4336 4.669318 CCAACTAATCGTCGATGTGTACT 58.331 43.478 8.83 0.00 0.00 2.73
2612 4337 4.733887 CCAACTAATCGTCGATGTGTACTC 59.266 45.833 8.83 0.00 0.00 2.59
2613 4338 5.448768 CCAACTAATCGTCGATGTGTACTCT 60.449 44.000 8.83 0.00 0.00 3.24
2614 4339 5.158101 ACTAATCGTCGATGTGTACTCTG 57.842 43.478 8.83 0.00 0.00 3.35
2615 4340 2.476873 ATCGTCGATGTGTACTCTGC 57.523 50.000 7.00 0.00 0.00 4.26
2616 4341 0.450583 TCGTCGATGTGTACTCTGCC 59.549 55.000 4.21 0.00 0.00 4.85
2617 4342 0.525668 CGTCGATGTGTACTCTGCCC 60.526 60.000 0.00 0.00 0.00 5.36
2618 4343 0.530744 GTCGATGTGTACTCTGCCCA 59.469 55.000 0.00 0.00 0.00 5.36
2619 4344 1.137086 GTCGATGTGTACTCTGCCCAT 59.863 52.381 0.00 0.00 0.00 4.00
2620 4345 1.136891 TCGATGTGTACTCTGCCCATG 59.863 52.381 0.00 0.00 0.00 3.66
2675 4401 2.475111 CGAGCTTGCTGTTCGTTAGAAA 59.525 45.455 0.00 0.00 42.98 2.52
2691 4417 5.220719 CGTTAGAAAGTTTTGGTTCCTCGTT 60.221 40.000 0.00 0.00 0.00 3.85
2795 4529 9.487790 ACTTTGAAACAACTTGATTGAAAGAAA 57.512 25.926 21.96 2.35 41.23 2.52
2829 4563 1.155424 TTGTTCGTTGCTGGGTCGAC 61.155 55.000 7.13 7.13 33.38 4.20
2830 4564 1.593209 GTTCGTTGCTGGGTCGACA 60.593 57.895 18.91 0.00 33.38 4.35
2831 4565 0.949105 GTTCGTTGCTGGGTCGACAT 60.949 55.000 18.91 0.00 33.38 3.06
2833 4567 0.172578 TCGTTGCTGGGTCGACATAG 59.827 55.000 18.91 15.15 0.00 2.23
2835 4569 1.799181 CGTTGCTGGGTCGACATAGAG 60.799 57.143 18.91 7.85 0.00 2.43
2838 4572 1.751351 TGCTGGGTCGACATAGAGAAG 59.249 52.381 18.91 4.64 0.00 2.85
2839 4573 1.751924 GCTGGGTCGACATAGAGAAGT 59.248 52.381 18.91 0.00 0.00 3.01
2841 4575 3.243134 GCTGGGTCGACATAGAGAAGTAC 60.243 52.174 18.91 0.00 0.00 2.73
2842 4576 4.200874 CTGGGTCGACATAGAGAAGTACT 58.799 47.826 18.91 0.00 0.00 2.73
2844 4578 4.639310 TGGGTCGACATAGAGAAGTACTTC 59.361 45.833 25.24 25.24 39.78 3.01
2845 4579 4.036616 GGGTCGACATAGAGAAGTACTTCC 59.963 50.000 28.05 20.04 40.33 3.46
2847 4581 5.007921 GGTCGACATAGAGAAGTACTTCCTC 59.992 48.000 28.05 22.99 40.33 3.71
2848 4582 5.007921 GTCGACATAGAGAAGTACTTCCTCC 59.992 48.000 28.05 18.53 40.33 4.30
2849 4583 4.024725 CGACATAGAGAAGTACTTCCTCCG 60.025 50.000 28.05 19.74 40.33 4.63
2850 4584 4.857679 ACATAGAGAAGTACTTCCTCCGT 58.142 43.478 28.05 20.22 40.33 4.69
2851 4585 5.999044 ACATAGAGAAGTACTTCCTCCGTA 58.001 41.667 28.05 14.66 40.33 4.02
2852 4586 6.421485 ACATAGAGAAGTACTTCCTCCGTAA 58.579 40.000 28.05 12.13 40.33 3.18
2853 4587 6.888632 ACATAGAGAAGTACTTCCTCCGTAAA 59.111 38.462 28.05 11.55 40.33 2.01
2854 4588 5.641783 AGAGAAGTACTTCCTCCGTAAAC 57.358 43.478 28.05 10.98 40.33 2.01
2855 4589 5.323581 AGAGAAGTACTTCCTCCGTAAACT 58.676 41.667 28.05 8.91 40.33 2.66
2856 4590 6.479884 AGAGAAGTACTTCCTCCGTAAACTA 58.520 40.000 28.05 0.00 40.33 2.24
2857 4591 6.944862 AGAGAAGTACTTCCTCCGTAAACTAA 59.055 38.462 28.05 0.00 40.33 2.24
2858 4592 7.614974 AGAGAAGTACTTCCTCCGTAAACTAAT 59.385 37.037 28.05 7.82 40.33 1.73
2859 4593 8.814038 AGAAGTACTTCCTCCGTAAACTAATA 57.186 34.615 28.05 0.00 40.33 0.98
2860 4594 9.418839 AGAAGTACTTCCTCCGTAAACTAATAT 57.581 33.333 28.05 4.39 40.33 1.28
2866 4600 9.418839 ACTTCCTCCGTAAACTAATATAAGAGT 57.581 33.333 0.00 0.00 0.00 3.24
2867 4601 9.680315 CTTCCTCCGTAAACTAATATAAGAGTG 57.320 37.037 0.00 0.00 0.00 3.51
2868 4602 8.757982 TCCTCCGTAAACTAATATAAGAGTGT 57.242 34.615 0.00 0.00 0.00 3.55
2869 4603 9.193806 TCCTCCGTAAACTAATATAAGAGTGTT 57.806 33.333 0.00 0.00 0.00 3.32
2870 4604 9.813446 CCTCCGTAAACTAATATAAGAGTGTTT 57.187 33.333 0.00 0.00 0.00 2.83
2898 4632 9.733219 GATAACTACTTTAGTGATCTAAACGCT 57.267 33.333 4.09 0.00 41.55 5.07
2899 4633 9.733219 ATAACTACTTTAGTGATCTAAACGCTC 57.267 33.333 0.00 0.00 40.05 5.03
2900 4634 7.393841 ACTACTTTAGTGATCTAAACGCTCT 57.606 36.000 0.00 0.00 40.05 4.09
2901 4635 7.828712 ACTACTTTAGTGATCTAAACGCTCTT 58.171 34.615 0.00 0.00 40.05 2.85
2902 4636 8.954350 ACTACTTTAGTGATCTAAACGCTCTTA 58.046 33.333 0.00 0.00 40.05 2.10
2903 4637 9.953697 CTACTTTAGTGATCTAAACGCTCTTAT 57.046 33.333 0.00 0.00 40.05 1.73
2957 4691 7.555965 TCTTATTTCGAAGTTGATGATCCTCA 58.444 34.615 0.00 0.00 0.00 3.86
2963 4697 3.488778 AGTTGATGATCCTCAGCATCC 57.511 47.619 15.24 0.00 42.81 3.51
2967 4715 4.448720 TGATGATCCTCAGCATCCAAAT 57.551 40.909 0.00 0.00 43.70 2.32
2968 4716 4.800023 TGATGATCCTCAGCATCCAAATT 58.200 39.130 0.00 0.00 43.70 1.82
2970 4718 6.367161 TGATGATCCTCAGCATCCAAATTAA 58.633 36.000 0.00 0.00 43.70 1.40
2974 4722 6.319658 TGATCCTCAGCATCCAAATTAACTTC 59.680 38.462 0.00 0.00 0.00 3.01
3001 4750 9.478019 CAAACTTATCGAGATGTACATGTTTTC 57.522 33.333 14.43 0.00 0.00 2.29
3004 4753 9.436957 ACTTATCGAGATGTACATGTTTTCTTT 57.563 29.630 14.43 0.00 0.00 2.52
3024 4773 9.513906 TTTCTTTTGGGAAAAACTTTTGATCTT 57.486 25.926 0.00 0.00 33.04 2.40
3051 4801 8.707938 TCATCATGTATCAAGACAGTACAAAG 57.292 34.615 0.00 0.00 32.65 2.77
3059 4809 9.472361 GTATCAAGACAGTACAAAGAACACTAA 57.528 33.333 0.00 0.00 0.00 2.24
3087 4845 8.702819 AGTAAAAGTTATCCATAGACCACCTAC 58.297 37.037 0.00 0.00 0.00 3.18
3100 4858 2.298163 ACCACCTACCGACAACTACAAG 59.702 50.000 0.00 0.00 0.00 3.16
3106 4864 1.148310 CCGACAACTACAAGCACTGG 58.852 55.000 0.00 0.00 0.00 4.00
3109 4867 1.801178 GACAACTACAAGCACTGGAGC 59.199 52.381 0.00 0.00 40.05 4.70
3113 4871 1.079819 TACAAGCACTGGAGCGAGC 60.080 57.895 0.00 0.00 40.15 5.03
3115 4873 4.749310 AAGCACTGGAGCGAGCCG 62.749 66.667 0.00 0.00 40.15 5.52
3118 4876 2.507992 CACTGGAGCGAGCCGAAG 60.508 66.667 0.00 0.00 0.00 3.79
3132 4893 2.888534 GAAGGCGCGCCGTCATTA 60.889 61.111 46.25 0.00 42.76 1.90
3147 4908 3.641906 CGTCATTACCCTTCCCTCACTAT 59.358 47.826 0.00 0.00 0.00 2.12
3150 4911 5.839606 GTCATTACCCTTCCCTCACTATAGT 59.160 44.000 0.00 0.00 0.00 2.12
3152 4913 5.476950 TTACCCTTCCCTCACTATAGTCA 57.523 43.478 1.26 0.00 0.00 3.41
3173 4934 5.701029 CAAGCAAACCTTGTTGTGTTAAG 57.299 39.130 0.00 0.00 44.74 1.85
3180 4941 2.869801 CCTTGTTGTGTTAAGCAGTCGA 59.130 45.455 0.00 0.00 0.00 4.20
3182 4943 4.024048 CCTTGTTGTGTTAAGCAGTCGAAT 60.024 41.667 0.00 0.00 0.00 3.34
3211 4972 2.124411 TGCTAAGACCCAATAGGACCC 58.876 52.381 0.00 0.00 39.89 4.46
3214 4975 0.912487 AAGACCCAATAGGACCCGCA 60.912 55.000 0.00 0.00 39.89 5.69
3217 4978 1.279025 ACCCAATAGGACCCGCACAT 61.279 55.000 0.00 0.00 39.89 3.21
3220 4981 1.408127 CCAATAGGACCCGCACATCAA 60.408 52.381 0.00 0.00 36.89 2.57
3223 4984 1.816074 TAGGACCCGCACATCAAAAC 58.184 50.000 0.00 0.00 0.00 2.43
3225 4986 0.671251 GGACCCGCACATCAAAACAA 59.329 50.000 0.00 0.00 0.00 2.83
3228 4989 1.478510 ACCCGCACATCAAAACAACAA 59.521 42.857 0.00 0.00 0.00 2.83
3230 4991 2.481104 CCCGCACATCAAAACAACAACT 60.481 45.455 0.00 0.00 0.00 3.16
3232 4993 3.178267 CGCACATCAAAACAACAACTGT 58.822 40.909 0.00 0.00 41.27 3.55
3247 5008 0.888619 ACTGTCGCCGATGAAGAGAA 59.111 50.000 0.00 0.00 0.00 2.87
3266 5031 4.530875 AGAAGCATCGAAAGGATCCAATT 58.469 39.130 15.82 8.62 31.28 2.32
3277 5042 5.712152 AAGGATCCAATTTGAAGACACAC 57.288 39.130 15.82 0.00 0.00 3.82
3283 5048 4.035017 CCAATTTGAAGACACACGAACAC 58.965 43.478 0.00 0.00 0.00 3.32
3287 5052 3.239587 TGAAGACACACGAACACAGAA 57.760 42.857 0.00 0.00 0.00 3.02
3288 5053 3.186909 TGAAGACACACGAACACAGAAG 58.813 45.455 0.00 0.00 0.00 2.85
3290 5055 1.202533 AGACACACGAACACAGAAGGG 60.203 52.381 0.00 0.00 0.00 3.95
3292 5057 0.813610 CACACGAACACAGAAGGGCA 60.814 55.000 0.00 0.00 0.00 5.36
3293 5058 0.107410 ACACGAACACAGAAGGGCAA 60.107 50.000 0.00 0.00 0.00 4.52
3305 5087 4.943373 GGGCAAAGACCCCAAAGA 57.057 55.556 0.00 0.00 45.00 2.52
3310 5092 2.368548 GGCAAAGACCCCAAAGACAAAT 59.631 45.455 0.00 0.00 0.00 2.32
3314 5096 1.147817 AGACCCCAAAGACAAATGCCT 59.852 47.619 0.00 0.00 0.00 4.75
3317 5099 2.110011 ACCCCAAAGACAAATGCCTACT 59.890 45.455 0.00 0.00 0.00 2.57
3318 5100 3.332485 ACCCCAAAGACAAATGCCTACTA 59.668 43.478 0.00 0.00 0.00 1.82
3332 5166 2.550978 CCTACTAAATCGCACCACCAG 58.449 52.381 0.00 0.00 0.00 4.00
3333 5167 2.550978 CTACTAAATCGCACCACCAGG 58.449 52.381 0.00 0.00 42.21 4.45
3335 5169 1.338769 ACTAAATCGCACCACCAGGAC 60.339 52.381 0.00 0.00 38.69 3.85
3337 5171 2.107041 AAATCGCACCACCAGGACGA 62.107 55.000 0.00 6.81 45.71 4.20
3345 5179 0.970937 CCACCAGGACGAAGGCTAGA 60.971 60.000 0.00 0.00 36.89 2.43
3357 5191 0.413832 AGGCTAGACAGGGAGAACCA 59.586 55.000 0.00 0.00 43.89 3.67
3362 5196 4.503991 GGCTAGACAGGGAGAACCATATTG 60.504 50.000 0.00 0.00 43.89 1.90
3372 5206 5.358160 GGGAGAACCATATTGAAACTTCAGG 59.642 44.000 0.00 0.00 37.60 3.86
3375 5209 7.775561 GGAGAACCATATTGAAACTTCAGGTAT 59.224 37.037 2.54 0.00 32.73 2.73
3380 5214 2.396590 TGAAACTTCAGGTATCCGCC 57.603 50.000 0.00 0.00 32.50 6.13
3386 5220 2.279517 CAGGTATCCGCCGCTGTC 60.280 66.667 0.00 0.00 0.00 3.51
3394 5228 1.019278 TCCGCCGCTGTCTCATTTTC 61.019 55.000 0.00 0.00 0.00 2.29
3396 5230 1.425428 GCCGCTGTCTCATTTTCCG 59.575 57.895 0.00 0.00 0.00 4.30
3405 5239 4.030913 TGTCTCATTTTCCGGAGTAGGAT 58.969 43.478 3.34 0.00 40.48 3.24
3406 5240 4.141937 TGTCTCATTTTCCGGAGTAGGATG 60.142 45.833 3.34 6.28 40.48 3.51
3420 5254 1.834188 AGGATGCAAACCCTAAACGG 58.166 50.000 9.25 0.00 0.00 4.44
3422 5256 1.471287 GGATGCAAACCCTAAACGGAC 59.529 52.381 0.00 0.00 33.16 4.79
3468 5302 1.227674 GAGCCCTCCCGTATGCAAG 60.228 63.158 0.00 0.00 0.00 4.01
3485 5319 1.605058 AAGGGTCGAGATCCACCACG 61.605 60.000 5.08 0.00 32.73 4.94
3486 5320 2.348888 GGGTCGAGATCCACCACGT 61.349 63.158 8.07 0.00 33.91 4.49
3487 5321 1.033746 GGGTCGAGATCCACCACGTA 61.034 60.000 8.07 0.00 33.91 3.57
3488 5322 0.100146 GGTCGAGATCCACCACGTAC 59.900 60.000 0.00 0.00 32.33 3.67
3489 5323 0.247974 GTCGAGATCCACCACGTACG 60.248 60.000 15.01 15.01 0.00 3.67
3491 5325 1.226888 GAGATCCACCACGTACGCC 60.227 63.158 16.72 0.00 0.00 5.68
3493 5327 1.226888 GATCCACCACGTACGCCTC 60.227 63.158 16.72 0.00 0.00 4.70
3494 5328 1.664321 GATCCACCACGTACGCCTCT 61.664 60.000 16.72 0.00 0.00 3.69
3495 5329 0.394762 ATCCACCACGTACGCCTCTA 60.395 55.000 16.72 0.00 0.00 2.43
3496 5330 0.394762 TCCACCACGTACGCCTCTAT 60.395 55.000 16.72 0.00 0.00 1.98
3497 5331 0.248907 CCACCACGTACGCCTCTATG 60.249 60.000 16.72 4.65 0.00 2.23
3498 5332 0.248907 CACCACGTACGCCTCTATGG 60.249 60.000 16.72 16.45 39.35 2.74
3524 5358 1.377202 GCCACGGAAGATGAAGCCA 60.377 57.895 0.00 0.00 0.00 4.75
3528 5362 2.636830 CACGGAAGATGAAGCCAATCT 58.363 47.619 0.00 0.00 0.00 2.40
3561 5395 2.746277 GGAGGCGCAAACCACGAT 60.746 61.111 10.83 0.00 0.00 3.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 4.157120 CGTAACCCGCCCAGGAGG 62.157 72.222 0.00 0.00 45.00 4.30
19 20 2.877043 ATAACTACTGGCGTAACCCG 57.123 50.000 0.00 0.00 37.83 5.28
20 21 4.322273 GGGATATAACTACTGGCGTAACCC 60.322 50.000 0.00 0.00 37.83 4.11
21 22 4.322273 GGGGATATAACTACTGGCGTAACC 60.322 50.000 0.00 0.00 39.84 2.85
22 23 4.281688 TGGGGATATAACTACTGGCGTAAC 59.718 45.833 0.00 0.00 0.00 2.50
23 24 4.482030 TGGGGATATAACTACTGGCGTAA 58.518 43.478 0.00 0.00 0.00 3.18
24 25 4.116782 TGGGGATATAACTACTGGCGTA 57.883 45.455 0.00 0.00 0.00 4.42
25 26 2.966915 TGGGGATATAACTACTGGCGT 58.033 47.619 0.00 0.00 0.00 5.68
26 27 3.070446 TGTTGGGGATATAACTACTGGCG 59.930 47.826 0.00 0.00 0.00 5.69
27 28 4.699925 TGTTGGGGATATAACTACTGGC 57.300 45.455 0.00 0.00 0.00 4.85
28 29 6.289064 GTCTTGTTGGGGATATAACTACTGG 58.711 44.000 0.00 0.00 0.00 4.00
29 30 6.126883 TGGTCTTGTTGGGGATATAACTACTG 60.127 42.308 0.00 0.00 0.00 2.74
30 31 5.968167 TGGTCTTGTTGGGGATATAACTACT 59.032 40.000 0.00 0.00 0.00 2.57
31 32 6.243216 TGGTCTTGTTGGGGATATAACTAC 57.757 41.667 0.00 0.00 0.00 2.73
32 33 7.569485 TGTATGGTCTTGTTGGGGATATAACTA 59.431 37.037 0.00 0.00 0.00 2.24
33 34 5.994416 ATGGTCTTGTTGGGGATATAACT 57.006 39.130 0.00 0.00 0.00 2.24
34 35 6.597562 TGTATGGTCTTGTTGGGGATATAAC 58.402 40.000 0.00 0.00 0.00 1.89
35 36 6.833346 TGTATGGTCTTGTTGGGGATATAA 57.167 37.500 0.00 0.00 0.00 0.98
36 37 6.240147 CCATGTATGGTCTTGTTGGGGATATA 60.240 42.308 2.66 0.00 43.05 0.86
37 38 5.458069 CCATGTATGGTCTTGTTGGGGATAT 60.458 44.000 2.66 0.00 43.05 1.63
38 39 4.141274 CCATGTATGGTCTTGTTGGGGATA 60.141 45.833 2.66 0.00 43.05 2.59
39 40 3.373001 CCATGTATGGTCTTGTTGGGGAT 60.373 47.826 2.66 0.00 43.05 3.85
40 41 2.025416 CCATGTATGGTCTTGTTGGGGA 60.025 50.000 2.66 0.00 43.05 4.81
41 42 2.378038 CCATGTATGGTCTTGTTGGGG 58.622 52.381 2.66 0.00 43.05 4.96
62 63 0.740149 TTGGACAACTGCAGCTGTTG 59.260 50.000 32.42 32.42 44.77 3.33
63 64 1.473258 TTTGGACAACTGCAGCTGTT 58.527 45.000 22.87 11.68 0.00 3.16
64 65 1.473258 TTTTGGACAACTGCAGCTGT 58.527 45.000 22.27 22.27 0.00 4.40
65 66 2.400399 CATTTTGGACAACTGCAGCTG 58.600 47.619 15.27 15.40 0.00 4.24
66 67 1.342174 CCATTTTGGACAACTGCAGCT 59.658 47.619 15.27 0.00 40.96 4.24
67 68 1.787012 CCATTTTGGACAACTGCAGC 58.213 50.000 15.27 0.00 40.96 5.25
68 69 1.068895 TGCCATTTTGGACAACTGCAG 59.931 47.619 13.48 13.48 40.96 4.41
69 70 1.117994 TGCCATTTTGGACAACTGCA 58.882 45.000 0.00 0.00 40.96 4.41
70 71 2.028748 AGATGCCATTTTGGACAACTGC 60.029 45.455 0.00 0.00 40.96 4.40
71 72 3.581755 CAGATGCCATTTTGGACAACTG 58.418 45.455 0.00 5.94 40.96 3.16
72 73 2.564062 CCAGATGCCATTTTGGACAACT 59.436 45.455 3.74 0.00 40.96 3.16
73 74 2.932187 GCCAGATGCCATTTTGGACAAC 60.932 50.000 11.95 0.00 40.96 3.32
74 75 1.275856 GCCAGATGCCATTTTGGACAA 59.724 47.619 11.95 0.00 40.96 3.18
75 76 0.896923 GCCAGATGCCATTTTGGACA 59.103 50.000 11.95 0.00 40.96 4.02
76 77 0.896923 TGCCAGATGCCATTTTGGAC 59.103 50.000 11.95 5.47 40.96 4.02
77 78 0.896923 GTGCCAGATGCCATTTTGGA 59.103 50.000 11.95 0.00 40.96 3.53
78 79 0.899720 AGTGCCAGATGCCATTTTGG 59.100 50.000 5.15 5.15 41.55 3.28
79 80 2.028839 TCAAGTGCCAGATGCCATTTTG 60.029 45.455 0.00 0.00 40.16 2.44
80 81 2.028748 GTCAAGTGCCAGATGCCATTTT 60.029 45.455 0.00 0.00 40.16 1.82
81 82 1.547372 GTCAAGTGCCAGATGCCATTT 59.453 47.619 0.00 0.00 40.16 2.32
82 83 1.180029 GTCAAGTGCCAGATGCCATT 58.820 50.000 0.00 0.00 40.16 3.16
83 84 0.682209 GGTCAAGTGCCAGATGCCAT 60.682 55.000 0.00 0.00 40.16 4.40
84 85 1.303561 GGTCAAGTGCCAGATGCCA 60.304 57.895 0.00 0.00 40.16 4.92
85 86 0.253044 TAGGTCAAGTGCCAGATGCC 59.747 55.000 0.00 0.00 40.16 4.40
86 87 2.012673 CTTAGGTCAAGTGCCAGATGC 58.987 52.381 0.00 0.00 41.77 3.91
87 88 3.616956 TCTTAGGTCAAGTGCCAGATG 57.383 47.619 0.00 0.00 35.58 2.90
88 89 3.776969 TCATCTTAGGTCAAGTGCCAGAT 59.223 43.478 0.00 0.00 35.58 2.90
89 90 3.055819 GTCATCTTAGGTCAAGTGCCAGA 60.056 47.826 0.00 0.00 35.58 3.86
90 91 3.265791 GTCATCTTAGGTCAAGTGCCAG 58.734 50.000 0.00 0.00 35.58 4.85
91 92 2.637382 TGTCATCTTAGGTCAAGTGCCA 59.363 45.455 0.00 0.00 35.58 4.92
92 93 3.334583 TGTCATCTTAGGTCAAGTGCC 57.665 47.619 0.00 0.00 35.58 5.01
93 94 4.153117 CAGTTGTCATCTTAGGTCAAGTGC 59.847 45.833 0.00 0.00 34.35 4.40
94 95 4.153117 GCAGTTGTCATCTTAGGTCAAGTG 59.847 45.833 0.00 0.00 40.32 3.16
95 96 4.202357 TGCAGTTGTCATCTTAGGTCAAGT 60.202 41.667 0.00 0.00 35.58 3.16
96 97 4.318332 TGCAGTTGTCATCTTAGGTCAAG 58.682 43.478 0.00 0.00 35.38 3.02
97 98 4.202357 ACTGCAGTTGTCATCTTAGGTCAA 60.202 41.667 15.25 0.00 0.00 3.18
98 99 3.324846 ACTGCAGTTGTCATCTTAGGTCA 59.675 43.478 15.25 0.00 0.00 4.02
99 100 3.931578 ACTGCAGTTGTCATCTTAGGTC 58.068 45.455 15.25 0.00 0.00 3.85
100 101 4.357918 AACTGCAGTTGTCATCTTAGGT 57.642 40.909 30.66 1.77 36.80 3.08
112 113 1.338973 CATGGTTGCTCAACTGCAGTT 59.661 47.619 26.36 26.36 44.27 3.16
113 114 0.956633 CATGGTTGCTCAACTGCAGT 59.043 50.000 15.25 15.25 44.27 4.40
114 115 0.242825 CCATGGTTGCTCAACTGCAG 59.757 55.000 13.48 13.48 44.27 4.41
115 116 1.808531 GCCATGGTTGCTCAACTGCA 61.809 55.000 14.67 3.93 40.94 4.41
116 117 1.080298 GCCATGGTTGCTCAACTGC 60.080 57.895 14.67 6.92 40.94 4.40
117 118 0.675083 TTGCCATGGTTGCTCAACTG 59.325 50.000 14.67 4.33 40.94 3.16
118 119 0.675633 GTTGCCATGGTTGCTCAACT 59.324 50.000 19.25 0.00 40.94 3.16
119 120 0.675633 AGTTGCCATGGTTGCTCAAC 59.324 50.000 19.02 19.02 40.45 3.18
120 121 0.675083 CAGTTGCCATGGTTGCTCAA 59.325 50.000 14.67 5.59 0.00 3.02
121 122 0.467844 ACAGTTGCCATGGTTGCTCA 60.468 50.000 14.67 0.00 0.00 4.26
122 123 1.470098 CTACAGTTGCCATGGTTGCTC 59.530 52.381 14.67 0.00 0.00 4.26
123 124 1.202927 ACTACAGTTGCCATGGTTGCT 60.203 47.619 14.67 5.95 0.00 3.91
124 125 1.247567 ACTACAGTTGCCATGGTTGC 58.752 50.000 14.67 3.52 0.00 4.17
135 136 2.870435 GCCATGTCGGACAACTACAGTT 60.870 50.000 15.72 0.00 36.12 3.16
136 137 1.337823 GCCATGTCGGACAACTACAGT 60.338 52.381 15.72 0.00 36.56 3.55
137 138 1.337728 TGCCATGTCGGACAACTACAG 60.338 52.381 15.72 1.98 36.56 2.74
138 139 0.682292 TGCCATGTCGGACAACTACA 59.318 50.000 15.72 8.46 36.56 2.74
139 140 1.463444 GTTGCCATGTCGGACAACTAC 59.537 52.381 15.72 10.65 43.12 2.73
140 141 1.803334 GTTGCCATGTCGGACAACTA 58.197 50.000 15.72 2.39 43.12 2.24
141 142 2.629002 GTTGCCATGTCGGACAACT 58.371 52.632 15.72 0.00 43.12 3.16
142 143 0.951558 AAGTTGCCATGTCGGACAAC 59.048 50.000 15.72 8.30 45.02 3.32
143 144 1.686355 AAAGTTGCCATGTCGGACAA 58.314 45.000 15.72 0.00 36.56 3.18
144 145 2.224426 ACTAAAGTTGCCATGTCGGACA 60.224 45.455 14.01 14.01 36.56 4.02
145 146 2.423577 ACTAAAGTTGCCATGTCGGAC 58.576 47.619 0.00 0.00 36.56 4.79
146 147 2.851263 ACTAAAGTTGCCATGTCGGA 57.149 45.000 0.00 0.00 36.56 4.55
147 148 2.811431 TGAACTAAAGTTGCCATGTCGG 59.189 45.455 0.00 0.00 38.56 4.79
148 149 3.667960 GCTGAACTAAAGTTGCCATGTCG 60.668 47.826 0.00 0.00 38.56 4.35
149 150 3.667960 CGCTGAACTAAAGTTGCCATGTC 60.668 47.826 0.00 0.00 38.56 3.06
150 151 2.226437 CGCTGAACTAAAGTTGCCATGT 59.774 45.455 0.00 0.00 38.56 3.21
151 152 2.483877 TCGCTGAACTAAAGTTGCCATG 59.516 45.455 0.00 0.00 38.56 3.66
152 153 2.484264 GTCGCTGAACTAAAGTTGCCAT 59.516 45.455 0.00 0.00 38.56 4.40
153 154 1.871039 GTCGCTGAACTAAAGTTGCCA 59.129 47.619 0.00 0.00 38.56 4.92
154 155 1.871039 TGTCGCTGAACTAAAGTTGCC 59.129 47.619 0.00 0.00 38.56 4.52
155 156 3.482786 CATGTCGCTGAACTAAAGTTGC 58.517 45.455 0.00 0.00 38.56 4.17
156 157 3.667960 GCCATGTCGCTGAACTAAAGTTG 60.668 47.826 0.00 0.00 38.56 3.16
157 158 2.484264 GCCATGTCGCTGAACTAAAGTT 59.516 45.455 0.00 0.00 41.64 2.66
158 159 2.076863 GCCATGTCGCTGAACTAAAGT 58.923 47.619 0.00 0.00 0.00 2.66
159 160 2.076100 TGCCATGTCGCTGAACTAAAG 58.924 47.619 0.00 0.00 0.00 1.85
160 161 2.177394 TGCCATGTCGCTGAACTAAA 57.823 45.000 0.00 0.00 0.00 1.85
161 162 1.804151 GTTGCCATGTCGCTGAACTAA 59.196 47.619 0.00 0.00 0.00 2.24
162 163 1.001974 AGTTGCCATGTCGCTGAACTA 59.998 47.619 0.00 0.00 0.00 2.24
163 164 0.250467 AGTTGCCATGTCGCTGAACT 60.250 50.000 0.00 0.00 0.00 3.01
164 165 0.110056 CAGTTGCCATGTCGCTGAAC 60.110 55.000 0.00 0.00 0.00 3.18
165 166 1.855213 GCAGTTGCCATGTCGCTGAA 61.855 55.000 2.90 0.00 34.31 3.02
166 167 2.327343 GCAGTTGCCATGTCGCTGA 61.327 57.895 2.90 0.00 34.31 4.26
167 168 2.177531 GCAGTTGCCATGTCGCTG 59.822 61.111 0.00 0.00 34.31 5.18
168 169 2.281692 TGCAGTTGCCATGTCGCT 60.282 55.556 1.06 0.00 41.18 4.93
169 170 2.133742 AACTGCAGTTGCCATGTCGC 62.134 55.000 30.66 0.00 41.18 5.19
170 171 1.155889 TAACTGCAGTTGCCATGTCG 58.844 50.000 36.50 0.67 41.18 4.35
171 172 3.308530 GTTTAACTGCAGTTGCCATGTC 58.691 45.455 36.50 17.80 41.18 3.06
172 173 2.287547 CGTTTAACTGCAGTTGCCATGT 60.288 45.455 36.50 15.57 41.18 3.21
173 174 2.318578 CGTTTAACTGCAGTTGCCATG 58.681 47.619 36.50 22.27 41.18 3.66
174 175 1.269448 CCGTTTAACTGCAGTTGCCAT 59.731 47.619 36.50 17.03 41.18 4.40
175 176 0.665835 CCGTTTAACTGCAGTTGCCA 59.334 50.000 36.50 18.43 41.18 4.92
176 177 0.948678 TCCGTTTAACTGCAGTTGCC 59.051 50.000 36.50 23.36 41.18 4.52
177 178 1.332375 TGTCCGTTTAACTGCAGTTGC 59.668 47.619 36.50 25.04 38.90 4.17
178 179 3.896648 ATGTCCGTTTAACTGCAGTTG 57.103 42.857 36.50 22.02 38.90 3.16
179 180 3.880490 TCAATGTCCGTTTAACTGCAGTT 59.120 39.130 32.97 32.97 41.73 3.16
180 181 3.472652 TCAATGTCCGTTTAACTGCAGT 58.527 40.909 15.25 15.25 0.00 4.40
181 182 4.213270 TCTTCAATGTCCGTTTAACTGCAG 59.787 41.667 13.48 13.48 0.00 4.41
182 183 4.130857 TCTTCAATGTCCGTTTAACTGCA 58.869 39.130 0.00 0.00 0.00 4.41
183 184 4.378459 CCTCTTCAATGTCCGTTTAACTGC 60.378 45.833 0.00 0.00 0.00 4.40
184 185 4.154195 CCCTCTTCAATGTCCGTTTAACTG 59.846 45.833 0.00 0.00 0.00 3.16
185 186 4.202430 ACCCTCTTCAATGTCCGTTTAACT 60.202 41.667 0.00 0.00 0.00 2.24
186 187 4.070009 ACCCTCTTCAATGTCCGTTTAAC 58.930 43.478 0.00 0.00 0.00 2.01
187 188 4.320870 GACCCTCTTCAATGTCCGTTTAA 58.679 43.478 0.00 0.00 0.00 1.52
188 189 3.307199 GGACCCTCTTCAATGTCCGTTTA 60.307 47.826 0.00 0.00 38.07 2.01
189 190 2.552373 GGACCCTCTTCAATGTCCGTTT 60.552 50.000 0.00 0.00 38.07 3.60
190 191 1.003233 GGACCCTCTTCAATGTCCGTT 59.997 52.381 0.00 0.00 38.07 4.44
191 192 0.613777 GGACCCTCTTCAATGTCCGT 59.386 55.000 0.00 0.00 38.07 4.69
192 193 3.460648 GGACCCTCTTCAATGTCCG 57.539 57.895 0.00 0.00 38.07 4.79
193 194 1.909302 TCTGGACCCTCTTCAATGTCC 59.091 52.381 0.00 0.00 45.99 4.02
194 195 2.355209 GGTCTGGACCCTCTTCAATGTC 60.355 54.545 8.48 0.00 45.68 3.06
195 196 1.630878 GGTCTGGACCCTCTTCAATGT 59.369 52.381 8.48 0.00 45.68 2.71
196 197 2.409948 GGTCTGGACCCTCTTCAATG 57.590 55.000 8.48 0.00 45.68 2.82
210 211 3.803082 CGCCGTTGCCATGGTCTG 61.803 66.667 14.67 0.92 0.00 3.51
228 229 4.295119 ACAGTCACCACGCGTCCC 62.295 66.667 9.86 0.00 0.00 4.46
229 230 2.733593 GACAGTCACCACGCGTCC 60.734 66.667 9.86 0.00 0.00 4.79
230 231 2.027024 TGACAGTCACCACGCGTC 59.973 61.111 9.86 0.00 32.97 5.19
231 232 2.279252 GTGACAGTCACCACGCGT 60.279 61.111 21.52 5.58 41.37 6.01
235 236 3.036084 CCGCGTGACAGTCACCAC 61.036 66.667 25.11 17.23 44.20 4.16
236 237 4.293648 CCCGCGTGACAGTCACCA 62.294 66.667 25.11 0.00 44.20 4.17
256 257 3.352338 CTACCTCACGGTCCCGCAC 62.352 68.421 5.47 0.00 44.21 5.34
257 258 3.066190 CTACCTCACGGTCCCGCA 61.066 66.667 5.47 0.00 44.21 5.69
258 259 3.834799 CCTACCTCACGGTCCCGC 61.835 72.222 5.47 0.00 44.21 6.13
259 260 2.362120 ACCTACCTCACGGTCCCG 60.362 66.667 3.76 3.76 44.21 5.14
260 261 2.356780 CCACCTACCTCACGGTCCC 61.357 68.421 0.00 0.00 44.21 4.46
261 262 3.015312 GCCACCTACCTCACGGTCC 62.015 68.421 0.00 0.00 44.21 4.46
262 263 1.982938 AGCCACCTACCTCACGGTC 60.983 63.158 0.00 0.00 44.21 4.79
264 265 1.949847 CTCAGCCACCTACCTCACGG 61.950 65.000 0.00 0.00 0.00 4.94
265 266 0.965866 TCTCAGCCACCTACCTCACG 60.966 60.000 0.00 0.00 0.00 4.35
266 267 0.820871 CTCTCAGCCACCTACCTCAC 59.179 60.000 0.00 0.00 0.00 3.51
267 268 0.704664 TCTCTCAGCCACCTACCTCA 59.295 55.000 0.00 0.00 0.00 3.86
268 269 1.341581 ACTCTCTCAGCCACCTACCTC 60.342 57.143 0.00 0.00 0.00 3.85
269 270 0.707616 ACTCTCTCAGCCACCTACCT 59.292 55.000 0.00 0.00 0.00 3.08
270 271 1.478916 GAACTCTCTCAGCCACCTACC 59.521 57.143 0.00 0.00 0.00 3.18
271 272 1.133407 CGAACTCTCTCAGCCACCTAC 59.867 57.143 0.00 0.00 0.00 3.18
272 273 1.271982 ACGAACTCTCTCAGCCACCTA 60.272 52.381 0.00 0.00 0.00 3.08
273 274 0.540830 ACGAACTCTCTCAGCCACCT 60.541 55.000 0.00 0.00 0.00 4.00
274 275 0.389166 CACGAACTCTCTCAGCCACC 60.389 60.000 0.00 0.00 0.00 4.61
275 276 0.315568 ACACGAACTCTCTCAGCCAC 59.684 55.000 0.00 0.00 0.00 5.01
276 277 0.315251 CACACGAACTCTCTCAGCCA 59.685 55.000 0.00 0.00 0.00 4.75
277 278 0.389166 CCACACGAACTCTCTCAGCC 60.389 60.000 0.00 0.00 0.00 4.85
278 279 0.598562 TCCACACGAACTCTCTCAGC 59.401 55.000 0.00 0.00 0.00 4.26
279 280 2.230025 ACATCCACACGAACTCTCTCAG 59.770 50.000 0.00 0.00 0.00 3.35
280 281 2.239400 ACATCCACACGAACTCTCTCA 58.761 47.619 0.00 0.00 0.00 3.27
281 282 3.305398 AACATCCACACGAACTCTCTC 57.695 47.619 0.00 0.00 0.00 3.20
282 283 4.748892 CATAACATCCACACGAACTCTCT 58.251 43.478 0.00 0.00 0.00 3.10
283 284 3.307242 GCATAACATCCACACGAACTCTC 59.693 47.826 0.00 0.00 0.00 3.20
284 285 3.055819 AGCATAACATCCACACGAACTCT 60.056 43.478 0.00 0.00 0.00 3.24
285 286 3.262420 AGCATAACATCCACACGAACTC 58.738 45.455 0.00 0.00 0.00 3.01
286 287 3.334583 AGCATAACATCCACACGAACT 57.665 42.857 0.00 0.00 0.00 3.01
287 288 4.419522 AAAGCATAACATCCACACGAAC 57.580 40.909 0.00 0.00 0.00 3.95
288 289 5.218885 CAAAAAGCATAACATCCACACGAA 58.781 37.500 0.00 0.00 0.00 3.85
289 290 4.793071 CAAAAAGCATAACATCCACACGA 58.207 39.130 0.00 0.00 0.00 4.35
290 291 3.364621 GCAAAAAGCATAACATCCACACG 59.635 43.478 0.00 0.00 44.79 4.49
291 292 4.908966 GCAAAAAGCATAACATCCACAC 57.091 40.909 0.00 0.00 44.79 3.82
304 305 2.368655 CCTATGTGTGGGCAAAAAGC 57.631 50.000 0.00 0.00 44.65 3.51
317 318 0.324368 TCCCTCTCACACGCCTATGT 60.324 55.000 0.00 0.00 0.00 2.29
318 319 1.000283 GATCCCTCTCACACGCCTATG 60.000 57.143 0.00 0.00 0.00 2.23
319 320 1.333177 GATCCCTCTCACACGCCTAT 58.667 55.000 0.00 0.00 0.00 2.57
320 321 1.101635 CGATCCCTCTCACACGCCTA 61.102 60.000 0.00 0.00 0.00 3.93
321 322 2.418910 CGATCCCTCTCACACGCCT 61.419 63.158 0.00 0.00 0.00 5.52
322 323 2.105128 CGATCCCTCTCACACGCC 59.895 66.667 0.00 0.00 0.00 5.68
323 324 2.583593 GCGATCCCTCTCACACGC 60.584 66.667 0.00 0.00 39.33 5.34
324 325 0.803768 CTTGCGATCCCTCTCACACG 60.804 60.000 0.00 0.00 0.00 4.49
325 326 0.532573 TCTTGCGATCCCTCTCACAC 59.467 55.000 0.00 0.00 0.00 3.82
326 327 1.266178 TTCTTGCGATCCCTCTCACA 58.734 50.000 0.00 0.00 0.00 3.58
327 328 2.386661 TTTCTTGCGATCCCTCTCAC 57.613 50.000 0.00 0.00 0.00 3.51
328 329 3.417069 TTTTTCTTGCGATCCCTCTCA 57.583 42.857 0.00 0.00 0.00 3.27
348 349 1.734388 GCACCCACACGCCTCTTTTT 61.734 55.000 0.00 0.00 0.00 1.94
349 350 2.193536 GCACCCACACGCCTCTTTT 61.194 57.895 0.00 0.00 0.00 2.27
350 351 1.764571 TAGCACCCACACGCCTCTTT 61.765 55.000 0.00 0.00 0.00 2.52
351 352 2.172483 CTAGCACCCACACGCCTCTT 62.172 60.000 0.00 0.00 0.00 2.85
352 353 2.603473 TAGCACCCACACGCCTCT 60.603 61.111 0.00 0.00 0.00 3.69
353 354 2.125512 CTAGCACCCACACGCCTC 60.126 66.667 0.00 0.00 0.00 4.70
354 355 2.516888 AACTAGCACCCACACGCCT 61.517 57.895 0.00 0.00 0.00 5.52
355 356 2.032071 AACTAGCACCCACACGCC 59.968 61.111 0.00 0.00 0.00 5.68
356 357 1.164041 AACAACTAGCACCCACACGC 61.164 55.000 0.00 0.00 0.00 5.34
357 358 1.305201 AAACAACTAGCACCCACACG 58.695 50.000 0.00 0.00 0.00 4.49
358 359 2.798145 GCAAAACAACTAGCACCCACAC 60.798 50.000 0.00 0.00 0.00 3.82
359 360 1.407258 GCAAAACAACTAGCACCCACA 59.593 47.619 0.00 0.00 0.00 4.17
360 361 1.269569 GGCAAAACAACTAGCACCCAC 60.270 52.381 0.00 0.00 0.00 4.61
361 362 1.036707 GGCAAAACAACTAGCACCCA 58.963 50.000 0.00 0.00 0.00 4.51
362 363 0.317160 GGGCAAAACAACTAGCACCC 59.683 55.000 0.00 0.00 0.00 4.61
363 364 1.036707 TGGGCAAAACAACTAGCACC 58.963 50.000 0.00 0.00 0.00 5.01
364 365 1.407258 TGTGGGCAAAACAACTAGCAC 59.593 47.619 0.00 0.00 0.00 4.40
365 366 1.407258 GTGTGGGCAAAACAACTAGCA 59.593 47.619 0.00 0.00 0.00 3.49
366 367 1.599419 CGTGTGGGCAAAACAACTAGC 60.599 52.381 0.00 0.00 0.00 3.42
367 368 1.673920 ACGTGTGGGCAAAACAACTAG 59.326 47.619 0.00 0.00 0.00 2.57
368 369 1.752683 ACGTGTGGGCAAAACAACTA 58.247 45.000 0.00 0.00 0.00 2.24
369 370 1.673920 CTACGTGTGGGCAAAACAACT 59.326 47.619 0.00 0.00 0.00 3.16
370 371 1.268845 CCTACGTGTGGGCAAAACAAC 60.269 52.381 0.00 0.00 0.00 3.32
371 372 1.025812 CCTACGTGTGGGCAAAACAA 58.974 50.000 0.00 0.00 0.00 2.83
372 373 2.709170 CCTACGTGTGGGCAAAACA 58.291 52.632 0.00 0.00 0.00 2.83
386 387 3.952628 GACCAGCCCACACGCCTAC 62.953 68.421 0.00 0.00 0.00 3.18
387 388 3.702048 GACCAGCCCACACGCCTA 61.702 66.667 0.00 0.00 0.00 3.93
391 392 1.541310 TAAGAGGACCAGCCCACACG 61.541 60.000 0.00 0.00 37.37 4.49
392 393 0.250513 CTAAGAGGACCAGCCCACAC 59.749 60.000 0.00 0.00 37.37 3.82
393 394 0.116342 TCTAAGAGGACCAGCCCACA 59.884 55.000 0.00 0.00 37.37 4.17
394 395 0.537653 GTCTAAGAGGACCAGCCCAC 59.462 60.000 0.00 0.00 37.37 4.61
395 396 0.116342 TGTCTAAGAGGACCAGCCCA 59.884 55.000 0.00 0.00 37.37 5.36
396 397 0.537653 GTGTCTAAGAGGACCAGCCC 59.462 60.000 0.00 0.00 37.37 5.19
397 398 0.537653 GGTGTCTAAGAGGACCAGCC 59.462 60.000 0.00 0.00 35.54 4.85
398 399 1.066787 GTGGTGTCTAAGAGGACCAGC 60.067 57.143 0.00 0.00 39.17 4.85
399 400 2.028930 GTGTGGTGTCTAAGAGGACCAG 60.029 54.545 0.00 0.00 39.17 4.00
400 401 1.968493 GTGTGGTGTCTAAGAGGACCA 59.032 52.381 0.00 0.00 36.10 4.02
401 402 1.968493 TGTGTGGTGTCTAAGAGGACC 59.032 52.381 0.00 0.00 35.54 4.46
402 403 3.746045 TTGTGTGGTGTCTAAGAGGAC 57.254 47.619 0.00 0.00 36.81 3.85
403 404 4.764050 TTTTGTGTGGTGTCTAAGAGGA 57.236 40.909 0.00 0.00 0.00 3.71
404 405 4.821805 ACATTTTGTGTGGTGTCTAAGAGG 59.178 41.667 0.00 0.00 40.28 3.69
419 420 1.039856 GGTCTGCCCACACATTTTGT 58.960 50.000 0.00 0.00 39.97 2.83
420 421 3.892200 GGTCTGCCCACACATTTTG 57.108 52.632 0.00 0.00 0.00 2.44
431 432 2.437895 GGCGTTAAGGGGTCTGCC 60.438 66.667 0.00 0.00 35.04 4.85
432 433 2.437895 GGGCGTTAAGGGGTCTGC 60.438 66.667 0.00 0.00 0.00 4.26
433 434 1.376812 GTGGGCGTTAAGGGGTCTG 60.377 63.158 0.00 0.00 0.00 3.51
434 435 1.844289 TGTGGGCGTTAAGGGGTCT 60.844 57.895 0.00 0.00 0.00 3.85
435 436 1.673337 GTGTGGGCGTTAAGGGGTC 60.673 63.158 0.00 0.00 0.00 4.46
436 437 2.433004 GTGTGGGCGTTAAGGGGT 59.567 61.111 0.00 0.00 0.00 4.95
437 438 2.744709 CGTGTGGGCGTTAAGGGG 60.745 66.667 0.00 0.00 0.00 4.79
438 439 2.031465 ACGTGTGGGCGTTAAGGG 59.969 61.111 0.00 0.00 43.04 3.95
439 440 1.595929 ACACGTGTGGGCGTTAAGG 60.596 57.895 22.71 0.00 43.83 2.69
440 441 1.567537 CACACGTGTGGGCGTTAAG 59.432 57.895 35.65 11.35 43.83 1.85
441 442 3.720531 CACACGTGTGGGCGTTAA 58.279 55.556 35.65 0.00 43.83 2.01
449 450 0.438445 CGATAACTGCCACACGTGTG 59.562 55.000 36.13 36.13 45.23 3.82
450 451 0.032952 ACGATAACTGCCACACGTGT 59.967 50.000 17.22 17.22 32.93 4.49
451 452 0.713883 GACGATAACTGCCACACGTG 59.286 55.000 15.48 15.48 34.26 4.49
452 453 0.731514 CGACGATAACTGCCACACGT 60.732 55.000 0.00 0.00 36.71 4.49
453 454 0.731514 ACGACGATAACTGCCACACG 60.732 55.000 0.00 0.00 0.00 4.49
454 455 0.989890 GACGACGATAACTGCCACAC 59.010 55.000 0.00 0.00 0.00 3.82
455 456 0.108992 GGACGACGATAACTGCCACA 60.109 55.000 0.00 0.00 0.00 4.17
456 457 0.172803 AGGACGACGATAACTGCCAC 59.827 55.000 0.00 0.00 0.00 5.01
457 458 0.892755 AAGGACGACGATAACTGCCA 59.107 50.000 0.00 0.00 0.00 4.92
458 459 1.659098 CAAAGGACGACGATAACTGCC 59.341 52.381 0.00 0.00 0.00 4.85
459 460 2.602878 TCAAAGGACGACGATAACTGC 58.397 47.619 0.00 0.00 0.00 4.40
460 461 5.585500 TTTTCAAAGGACGACGATAACTG 57.415 39.130 0.00 0.00 0.00 3.16
461 462 6.128363 GGAATTTTCAAAGGACGACGATAACT 60.128 38.462 0.00 0.00 0.00 2.24
462 463 6.019762 GGAATTTTCAAAGGACGACGATAAC 58.980 40.000 0.00 0.00 0.00 1.89
463 464 5.701750 TGGAATTTTCAAAGGACGACGATAA 59.298 36.000 0.00 0.00 0.00 1.75
464 465 5.239351 TGGAATTTTCAAAGGACGACGATA 58.761 37.500 0.00 0.00 0.00 2.92
465 466 4.069304 TGGAATTTTCAAAGGACGACGAT 58.931 39.130 0.00 0.00 0.00 3.73
466 467 3.468770 TGGAATTTTCAAAGGACGACGA 58.531 40.909 0.00 0.00 0.00 4.20
467 468 3.889196 TGGAATTTTCAAAGGACGACG 57.111 42.857 0.00 0.00 0.00 5.12
496 497 9.854668 TCGGATGGTCCTTTATATTTTATTGAA 57.145 29.630 0.00 0.00 33.30 2.69
497 498 9.854668 TTCGGATGGTCCTTTATATTTTATTGA 57.145 29.630 0.00 0.00 33.30 2.57
557 558 2.667969 CGATTTTGCCAGGCTTTTTAGC 59.332 45.455 14.15 0.00 0.00 3.09
558 559 3.253230 CCGATTTTGCCAGGCTTTTTAG 58.747 45.455 14.15 0.18 0.00 1.85
559 560 2.611722 GCCGATTTTGCCAGGCTTTTTA 60.612 45.455 14.15 0.00 45.67 1.52
560 561 1.877680 GCCGATTTTGCCAGGCTTTTT 60.878 47.619 14.15 0.00 45.67 1.94
561 562 0.320683 GCCGATTTTGCCAGGCTTTT 60.321 50.000 14.15 0.00 45.67 2.27
562 563 1.293179 GCCGATTTTGCCAGGCTTT 59.707 52.632 14.15 0.00 45.67 3.51
563 564 2.973082 GCCGATTTTGCCAGGCTT 59.027 55.556 14.15 0.00 45.67 4.35
566 567 2.182537 GCTGCCGATTTTGCCAGG 59.817 61.111 0.00 0.00 0.00 4.45
567 568 2.198906 TTCGCTGCCGATTTTGCCAG 62.199 55.000 0.00 0.00 43.97 4.85
568 569 2.264461 TTCGCTGCCGATTTTGCCA 61.264 52.632 0.00 0.00 43.97 4.92
569 570 1.801512 GTTCGCTGCCGATTTTGCC 60.802 57.895 0.00 0.00 43.97 4.52
570 571 1.067199 CTGTTCGCTGCCGATTTTGC 61.067 55.000 0.00 0.00 43.97 3.68
571 572 0.454957 CCTGTTCGCTGCCGATTTTG 60.455 55.000 0.00 0.00 43.97 2.44
572 573 1.875963 CCTGTTCGCTGCCGATTTT 59.124 52.632 0.00 0.00 43.97 1.82
573 574 2.690778 GCCTGTTCGCTGCCGATTT 61.691 57.895 0.00 0.00 43.97 2.17
574 575 3.127533 GCCTGTTCGCTGCCGATT 61.128 61.111 0.00 0.00 43.97 3.34
583 584 1.518572 ATTAGCGGTCGCCTGTTCG 60.519 57.895 11.95 0.00 43.17 3.95
584 585 1.429148 CCATTAGCGGTCGCCTGTTC 61.429 60.000 11.95 0.00 43.17 3.18
585 586 1.449601 CCATTAGCGGTCGCCTGTT 60.450 57.895 11.95 0.00 43.17 3.16
586 587 2.186903 CCATTAGCGGTCGCCTGT 59.813 61.111 11.95 0.00 43.17 4.00
587 588 2.588877 CCCATTAGCGGTCGCCTG 60.589 66.667 11.95 7.35 43.17 4.85
588 589 4.547367 GCCCATTAGCGGTCGCCT 62.547 66.667 11.95 2.50 43.17 5.52
589 590 4.547367 AGCCCATTAGCGGTCGCC 62.547 66.667 11.95 0.00 43.17 5.54
590 591 3.272334 CAGCCCATTAGCGGTCGC 61.272 66.667 7.32 7.32 42.33 5.19
591 592 1.592669 CTCAGCCCATTAGCGGTCG 60.593 63.158 0.00 0.00 38.01 4.79
592 593 1.227674 CCTCAGCCCATTAGCGGTC 60.228 63.158 0.00 0.00 38.01 4.79
593 594 2.911143 CCTCAGCCCATTAGCGGT 59.089 61.111 0.00 0.00 38.01 5.68
594 595 2.592861 GCCTCAGCCCATTAGCGG 60.593 66.667 0.00 0.00 38.01 5.52
604 605 1.648467 GACGATTGTTGGGCCTCAGC 61.648 60.000 4.53 1.49 38.76 4.26
605 606 0.036010 AGACGATTGTTGGGCCTCAG 60.036 55.000 4.53 0.00 0.00 3.35
606 607 0.321564 CAGACGATTGTTGGGCCTCA 60.322 55.000 4.53 0.87 0.00 3.86
607 608 1.648467 GCAGACGATTGTTGGGCCTC 61.648 60.000 4.53 0.00 0.00 4.70
608 609 1.675641 GCAGACGATTGTTGGGCCT 60.676 57.895 4.53 0.00 0.00 5.19
609 610 0.392461 TAGCAGACGATTGTTGGGCC 60.392 55.000 0.00 0.00 0.00 5.80
610 611 1.130561 GTTAGCAGACGATTGTTGGGC 59.869 52.381 0.00 0.00 0.00 5.36
611 612 2.416547 CAGTTAGCAGACGATTGTTGGG 59.583 50.000 0.00 0.00 0.00 4.12
612 613 2.416547 CCAGTTAGCAGACGATTGTTGG 59.583 50.000 0.00 0.00 0.00 3.77
613 614 2.159653 GCCAGTTAGCAGACGATTGTTG 60.160 50.000 0.00 0.00 0.00 3.33
614 615 2.076863 GCCAGTTAGCAGACGATTGTT 58.923 47.619 0.00 0.00 0.00 2.83
615 616 1.726853 GCCAGTTAGCAGACGATTGT 58.273 50.000 0.00 0.00 0.00 2.71
616 617 0.647410 CGCCAGTTAGCAGACGATTG 59.353 55.000 0.00 0.00 0.00 2.67
617 618 1.084370 GCGCCAGTTAGCAGACGATT 61.084 55.000 0.00 0.00 0.00 3.34
618 619 1.519455 GCGCCAGTTAGCAGACGAT 60.519 57.895 0.00 0.00 0.00 3.73
619 620 2.126071 GCGCCAGTTAGCAGACGA 60.126 61.111 0.00 0.00 0.00 4.20
620 621 3.545481 CGCGCCAGTTAGCAGACG 61.545 66.667 0.00 0.00 0.00 4.18
621 622 0.734942 TAACGCGCCAGTTAGCAGAC 60.735 55.000 5.73 0.00 35.70 3.51
622 623 0.038067 TTAACGCGCCAGTTAGCAGA 60.038 50.000 5.73 0.00 37.80 4.26
623 624 0.370273 CTTAACGCGCCAGTTAGCAG 59.630 55.000 5.73 0.00 37.80 4.24
624 625 1.632046 GCTTAACGCGCCAGTTAGCA 61.632 55.000 5.73 0.00 37.80 3.49
625 626 1.060465 GCTTAACGCGCCAGTTAGC 59.940 57.895 5.73 7.67 37.80 3.09
637 638 1.339291 ACCTCCTATACGGCGCTTAAC 59.661 52.381 6.90 0.00 0.00 2.01
638 639 1.610522 GACCTCCTATACGGCGCTTAA 59.389 52.381 6.90 0.00 0.00 1.85
639 640 1.202855 AGACCTCCTATACGGCGCTTA 60.203 52.381 6.90 0.00 0.00 3.09
640 641 0.467659 AGACCTCCTATACGGCGCTT 60.468 55.000 6.90 0.00 0.00 4.68
641 642 0.890090 GAGACCTCCTATACGGCGCT 60.890 60.000 6.90 0.00 0.00 5.92
642 643 1.580437 GAGACCTCCTATACGGCGC 59.420 63.158 6.90 0.00 0.00 6.53
643 644 2.255430 GGAGACCTCCTATACGGCG 58.745 63.158 4.80 4.80 46.16 6.46
664 665 1.268234 GCAGAACATAATGCGTCTGGC 60.268 52.381 10.34 1.99 43.96 4.85
665 666 1.331756 GGCAGAACATAATGCGTCTGG 59.668 52.381 10.34 0.00 43.49 3.86
666 667 1.004610 CGGCAGAACATAATGCGTCTG 60.005 52.381 5.54 5.54 43.49 3.51
667 668 1.290203 CGGCAGAACATAATGCGTCT 58.710 50.000 0.00 0.00 43.49 4.18
668 669 0.304705 CCGGCAGAACATAATGCGTC 59.695 55.000 0.00 0.00 43.49 5.19
669 670 0.392461 ACCGGCAGAACATAATGCGT 60.392 50.000 0.00 0.00 43.49 5.24
670 671 0.732571 AACCGGCAGAACATAATGCG 59.267 50.000 0.00 0.00 43.49 4.73
671 672 1.742831 TGAACCGGCAGAACATAATGC 59.257 47.619 0.00 0.00 41.80 3.56
672 673 3.727673 CGTTGAACCGGCAGAACATAATG 60.728 47.826 0.00 0.00 0.00 1.90
673 674 2.418628 CGTTGAACCGGCAGAACATAAT 59.581 45.455 0.00 0.00 0.00 1.28
717 718 4.028490 ATGGGGCGGCTTCGTGAA 62.028 61.111 9.56 0.00 36.07 3.18
718 719 4.776322 CATGGGGCGGCTTCGTGA 62.776 66.667 9.56 0.00 36.07 4.35
719 720 3.673956 TACATGGGGCGGCTTCGTG 62.674 63.158 9.56 15.09 36.07 4.35
746 748 2.091885 TGAAGCTGAAAACCAGGAACCT 60.092 45.455 0.00 0.00 43.13 3.50
766 768 3.739300 CGGGTAGGAGTAATGCGTTTATG 59.261 47.826 0.00 0.00 0.00 1.90
774 776 1.068741 GCCAGACGGGTAGGAGTAATG 59.931 57.143 0.00 0.00 39.65 1.90
822 824 2.228343 GAGTACAGCCTTATCGCCGTAT 59.772 50.000 0.00 0.00 0.00 3.06
836 838 1.282248 CGTTGGGCACACGAGTACAG 61.282 60.000 5.17 0.00 0.00 2.74
956 1012 5.761234 CGGATCTCTAGTTAGCTACTCAACT 59.239 44.000 5.04 5.04 38.33 3.16
957 1013 5.561339 GCGGATCTCTAGTTAGCTACTCAAC 60.561 48.000 0.00 0.00 38.33 3.18
969 1029 0.035036 TCGATCGGCGGATCTCTAGT 59.965 55.000 26.04 0.00 45.66 2.57
991 1054 6.258727 ACATGAAAACTCGCCATATTCTACTG 59.741 38.462 0.00 0.00 0.00 2.74
992 1055 6.349300 ACATGAAAACTCGCCATATTCTACT 58.651 36.000 0.00 0.00 0.00 2.57
1970 2532 8.571336 GGATTCTTTGGAACTATGGATAATGTG 58.429 37.037 0.00 0.00 33.96 3.21
1971 2534 8.281531 TGGATTCTTTGGAACTATGGATAATGT 58.718 33.333 0.00 0.00 33.96 2.71
1978 3609 5.480073 TGGTTTGGATTCTTTGGAACTATGG 59.520 40.000 0.00 0.00 33.96 2.74
1989 3620 5.018809 AGCACATGTATGGTTTGGATTCTT 58.981 37.500 0.00 0.00 0.00 2.52
1992 3623 4.343231 TGAGCACATGTATGGTTTGGATT 58.657 39.130 0.00 0.00 0.00 3.01
2043 3678 7.391554 ACAGGCATGCACGAGAATATATATTTT 59.608 33.333 21.36 3.87 0.00 1.82
2066 3777 3.184581 GCGTTTGAGTCTTGAACCTACAG 59.815 47.826 0.00 0.00 0.00 2.74
2170 3886 1.627550 GCTCGAAGAACTTGGCGTCC 61.628 60.000 0.00 0.00 34.09 4.79
2338 4054 2.433491 GTGTACATGCCGCCGTCA 60.433 61.111 0.00 0.00 0.00 4.35
2365 4081 3.869272 GCTCCAGCGTTGATGCGG 61.869 66.667 0.00 1.37 40.67 5.69
2377 4093 1.672030 CATGCCGTTGACTGCTCCA 60.672 57.895 0.00 0.00 0.00 3.86
2569 4294 1.883638 GCAGCATTGTCCTTGGACAGA 60.884 52.381 20.03 12.88 36.35 3.41
2573 4298 0.178967 TTGGCAGCATTGTCCTTGGA 60.179 50.000 0.00 0.00 0.00 3.53
2603 4328 2.169352 GAGTCATGGGCAGAGTACACAT 59.831 50.000 0.00 0.00 0.00 3.21
2609 4334 1.893786 GACGAGTCATGGGCAGAGT 59.106 57.895 0.00 0.00 0.00 3.24
2610 4335 1.226802 CGACGAGTCATGGGCAGAG 60.227 63.158 4.02 0.00 0.00 3.35
2611 4336 1.977009 ACGACGAGTCATGGGCAGA 60.977 57.895 0.00 0.00 0.00 4.26
2612 4337 1.807165 CACGACGAGTCATGGGCAG 60.807 63.158 0.00 0.00 0.00 4.85
2613 4338 2.261361 CACGACGAGTCATGGGCA 59.739 61.111 0.00 0.00 0.00 5.36
2614 4339 2.509336 CCACGACGAGTCATGGGC 60.509 66.667 10.20 0.00 39.13 5.36
2615 4340 1.139734 CTCCACGACGAGTCATGGG 59.860 63.158 16.86 8.16 42.72 4.00
2616 4341 1.092348 TACTCCACGACGAGTCATGG 58.908 55.000 11.67 11.67 43.75 3.66
2617 4342 4.750952 ATATACTCCACGACGAGTCATG 57.249 45.455 11.49 0.00 42.19 3.07
2618 4343 6.538021 GGTATATATACTCCACGACGAGTCAT 59.462 42.308 19.78 9.41 42.19 3.06
2619 4344 5.871524 GGTATATATACTCCACGACGAGTCA 59.128 44.000 19.78 3.75 42.19 3.41
2620 4345 6.105333 AGGTATATATACTCCACGACGAGTC 58.895 44.000 19.78 1.91 42.19 3.36
2656 4382 3.467803 ACTTTCTAACGAACAGCAAGCT 58.532 40.909 0.00 0.00 0.00 3.74
2658 4384 5.455525 CCAAAACTTTCTAACGAACAGCAAG 59.544 40.000 0.00 0.00 0.00 4.01
2660 4386 4.396790 ACCAAAACTTTCTAACGAACAGCA 59.603 37.500 0.00 0.00 0.00 4.41
2675 4401 1.937899 CGACAACGAGGAACCAAAACT 59.062 47.619 0.00 0.00 42.66 2.66
2719 4446 6.708949 CGGTAGCCACATTAACACCTAATATT 59.291 38.462 0.00 0.00 0.00 1.28
2794 4528 9.862585 GCAACGAACAATTCAAATAAGATTTTT 57.137 25.926 0.00 0.00 0.00 1.94
2795 4529 9.260002 AGCAACGAACAATTCAAATAAGATTTT 57.740 25.926 0.00 0.00 0.00 1.82
2829 4563 6.939132 TTACGGAGGAAGTACTTCTCTATG 57.061 41.667 29.66 21.29 39.45 2.23
2830 4564 7.118060 AGTTTACGGAGGAAGTACTTCTCTAT 58.882 38.462 29.66 16.33 39.45 1.98
2831 4565 6.479884 AGTTTACGGAGGAAGTACTTCTCTA 58.520 40.000 29.66 14.21 39.45 2.43
2833 4567 5.641783 AGTTTACGGAGGAAGTACTTCTC 57.358 43.478 29.66 23.63 39.45 2.87
2841 4575 9.680315 CACTCTTATATTAGTTTACGGAGGAAG 57.320 37.037 0.00 0.00 0.00 3.46
2842 4576 9.193806 ACACTCTTATATTAGTTTACGGAGGAA 57.806 33.333 0.00 0.00 0.00 3.36
2844 4578 9.813446 AAACACTCTTATATTAGTTTACGGAGG 57.187 33.333 0.00 0.00 0.00 4.30
2871 4605 9.733219 GCGTTTAGATCACTAAAGTAGTTATCT 57.267 33.333 13.75 13.75 46.18 1.98
2872 4606 9.733219 AGCGTTTAGATCACTAAAGTAGTTATC 57.267 33.333 0.00 2.65 45.42 1.75
2873 4607 9.733219 GAGCGTTTAGATCACTAAAGTAGTTAT 57.267 33.333 0.00 0.00 45.42 1.89
2874 4608 8.954350 AGAGCGTTTAGATCACTAAAGTAGTTA 58.046 33.333 0.00 0.00 45.42 2.24
2875 4609 7.828712 AGAGCGTTTAGATCACTAAAGTAGTT 58.171 34.615 0.00 0.00 45.42 2.24
2876 4610 7.393841 AGAGCGTTTAGATCACTAAAGTAGT 57.606 36.000 0.00 0.00 45.42 2.73
2877 4611 9.953697 ATAAGAGCGTTTAGATCACTAAAGTAG 57.046 33.333 0.00 0.00 45.42 2.57
2894 4628 9.750783 TCCCTCTATAAACTAATATAAGAGCGT 57.249 33.333 0.00 0.00 0.00 5.07
2957 4691 6.670695 AGTTTGGAAGTTAATTTGGATGCT 57.329 33.333 0.00 0.00 0.00 3.79
2967 4715 9.362539 GTACATCTCGATAAGTTTGGAAGTTAA 57.637 33.333 0.00 0.00 30.64 2.01
2968 4716 8.525316 TGTACATCTCGATAAGTTTGGAAGTTA 58.475 33.333 0.00 0.00 0.00 2.24
2970 4718 6.931838 TGTACATCTCGATAAGTTTGGAAGT 58.068 36.000 0.00 0.00 0.00 3.01
2974 4722 7.539712 AACATGTACATCTCGATAAGTTTGG 57.460 36.000 5.07 0.00 0.00 3.28
3001 4750 9.773328 GAAAAGATCAAAAGTTTTTCCCAAAAG 57.227 29.630 0.00 0.00 34.88 2.27
3004 4753 9.108284 GATGAAAAGATCAAAAGTTTTTCCCAA 57.892 29.630 11.09 0.00 42.54 4.12
3005 4754 8.263640 TGATGAAAAGATCAAAAGTTTTTCCCA 58.736 29.630 11.09 7.75 42.54 4.37
3006 4755 8.661352 TGATGAAAAGATCAAAAGTTTTTCCC 57.339 30.769 11.09 5.99 42.54 3.97
3024 4773 9.500785 TTTGTACTGTCTTGATACATGATGAAA 57.499 29.630 0.00 0.00 0.00 2.69
3033 4783 7.948278 AGTGTTCTTTGTACTGTCTTGATAC 57.052 36.000 0.00 0.00 0.00 2.24
3059 4809 8.612145 AGGTGGTCTATGGATAACTTTTACTTT 58.388 33.333 0.00 0.00 0.00 2.66
3068 4818 4.022503 GTCGGTAGGTGGTCTATGGATAAC 60.023 50.000 0.00 0.00 0.00 1.89
3087 4845 1.148310 CCAGTGCTTGTAGTTGTCGG 58.852 55.000 0.00 0.00 0.00 4.79
3100 4858 4.742201 TTCGGCTCGCTCCAGTGC 62.742 66.667 0.00 0.00 0.00 4.40
3115 4873 2.888534 TAATGACGGCGCGCCTTC 60.889 61.111 40.45 40.45 35.24 3.46
3123 4881 0.179054 GAGGGAAGGGTAATGACGGC 60.179 60.000 0.00 0.00 0.00 5.68
3132 4893 4.290942 CTTGACTATAGTGAGGGAAGGGT 58.709 47.826 10.90 0.00 0.00 4.34
3136 4897 5.488341 GTTTGCTTGACTATAGTGAGGGAA 58.512 41.667 10.90 7.24 0.00 3.97
3147 4908 4.013728 ACACAACAAGGTTTGCTTGACTA 58.986 39.130 0.00 0.00 35.88 2.59
3150 4911 3.951775 AACACAACAAGGTTTGCTTGA 57.048 38.095 0.00 0.00 35.88 3.02
3152 4913 4.180817 GCTTAACACAACAAGGTTTGCTT 58.819 39.130 0.00 0.00 0.00 3.91
3168 4929 5.035443 ACGATGACTATTCGACTGCTTAAC 58.965 41.667 0.00 0.00 39.81 2.01
3169 4930 5.034797 CACGATGACTATTCGACTGCTTAA 58.965 41.667 0.00 0.00 39.81 1.85
3172 4933 2.796383 GCACGATGACTATTCGACTGCT 60.796 50.000 0.00 0.00 39.81 4.24
3173 4934 1.518929 GCACGATGACTATTCGACTGC 59.481 52.381 0.00 0.00 39.81 4.40
3180 4941 3.704566 TGGGTCTTAGCACGATGACTATT 59.295 43.478 0.00 0.00 0.00 1.73
3182 4943 2.730382 TGGGTCTTAGCACGATGACTA 58.270 47.619 0.00 0.00 0.00 2.59
3211 4972 3.178267 ACAGTTGTTGTTTTGATGTGCG 58.822 40.909 0.00 0.00 36.31 5.34
3214 4975 3.434637 GCGACAGTTGTTGTTTTGATGT 58.565 40.909 1.74 0.00 41.05 3.06
3217 4978 1.202087 CGGCGACAGTTGTTGTTTTGA 60.202 47.619 0.00 0.00 41.05 2.69
3220 4981 1.002900 CATCGGCGACAGTTGTTGTTT 60.003 47.619 13.76 0.00 41.05 2.83
3223 4984 0.865111 TTCATCGGCGACAGTTGTTG 59.135 50.000 13.76 4.65 0.00 3.33
3225 4986 0.317160 TCTTCATCGGCGACAGTTGT 59.683 50.000 13.76 0.00 0.00 3.32
3228 4989 0.888619 TTCTCTTCATCGGCGACAGT 59.111 50.000 13.76 0.00 0.00 3.55
3230 4991 0.458543 GCTTCTCTTCATCGGCGACA 60.459 55.000 13.76 0.00 0.00 4.35
3232 4993 0.461548 ATGCTTCTCTTCATCGGCGA 59.538 50.000 13.87 13.87 0.00 5.54
3247 5008 4.272489 TCAAATTGGATCCTTTCGATGCT 58.728 39.130 14.23 0.00 39.92 3.79
3266 5031 3.239587 TCTGTGTTCGTGTGTCTTCAA 57.760 42.857 0.00 0.00 0.00 2.69
3277 5042 1.264288 GTCTTTGCCCTTCTGTGTTCG 59.736 52.381 0.00 0.00 0.00 3.95
3290 5055 3.392882 CATTTGTCTTTGGGGTCTTTGC 58.607 45.455 0.00 0.00 0.00 3.68
3292 5057 2.368548 GGCATTTGTCTTTGGGGTCTTT 59.631 45.455 0.00 0.00 0.00 2.52
3293 5058 1.970640 GGCATTTGTCTTTGGGGTCTT 59.029 47.619 0.00 0.00 0.00 3.01
3299 5064 6.258160 CGATTTAGTAGGCATTTGTCTTTGG 58.742 40.000 0.00 0.00 0.00 3.28
3305 5087 3.377172 GGTGCGATTTAGTAGGCATTTGT 59.623 43.478 0.00 0.00 37.77 2.83
3310 5092 1.406341 GGTGGTGCGATTTAGTAGGCA 60.406 52.381 0.00 0.00 0.00 4.75
3314 5096 2.093869 GTCCTGGTGGTGCGATTTAGTA 60.094 50.000 0.00 0.00 34.23 1.82
3317 5099 0.390603 CGTCCTGGTGGTGCGATTTA 60.391 55.000 0.00 0.00 35.90 1.40
3318 5100 1.671054 CGTCCTGGTGGTGCGATTT 60.671 57.895 0.00 0.00 35.90 2.17
3332 5166 0.683504 TCCCTGTCTAGCCTTCGTCC 60.684 60.000 0.00 0.00 0.00 4.79
3333 5167 0.741915 CTCCCTGTCTAGCCTTCGTC 59.258 60.000 0.00 0.00 0.00 4.20
3335 5169 1.135333 GTTCTCCCTGTCTAGCCTTCG 59.865 57.143 0.00 0.00 0.00 3.79
3337 5171 1.203313 TGGTTCTCCCTGTCTAGCCTT 60.203 52.381 0.00 0.00 0.00 4.35
3345 5179 5.520748 AGTTTCAATATGGTTCTCCCTGT 57.479 39.130 0.00 0.00 0.00 4.00
3357 5191 5.063880 GGCGGATACCTGAAGTTTCAATAT 58.936 41.667 0.00 0.00 36.64 1.28
3362 5196 1.287425 CGGCGGATACCTGAAGTTTC 58.713 55.000 0.00 0.00 0.00 2.78
3372 5206 0.249489 AATGAGACAGCGGCGGATAC 60.249 55.000 9.78 0.00 0.00 2.24
3375 5209 1.003839 AAAATGAGACAGCGGCGGA 60.004 52.632 9.78 0.00 0.00 5.54
3380 5214 1.002366 CTCCGGAAAATGAGACAGCG 58.998 55.000 5.23 0.00 0.00 5.18
3386 5220 3.134458 GCATCCTACTCCGGAAAATGAG 58.866 50.000 5.23 0.00 36.49 2.90
3394 5228 0.463833 GGGTTTGCATCCTACTCCGG 60.464 60.000 0.00 0.00 0.00 5.14
3396 5230 3.926058 TTAGGGTTTGCATCCTACTCC 57.074 47.619 9.61 1.38 35.56 3.85
3405 5239 1.310904 GTGTCCGTTTAGGGTTTGCA 58.689 50.000 0.00 0.00 41.52 4.08
3406 5240 0.594602 GGTGTCCGTTTAGGGTTTGC 59.405 55.000 0.00 0.00 41.52 3.68
3420 5254 5.032220 CGTTTTCAGGTGTTTTTAGGTGTC 58.968 41.667 0.00 0.00 0.00 3.67
3422 5256 4.096682 TCCGTTTTCAGGTGTTTTTAGGTG 59.903 41.667 0.00 0.00 0.00 4.00
3460 5294 1.412710 TGGATCTCGACCCTTGCATAC 59.587 52.381 0.00 0.00 0.00 2.39
3461 5295 1.412710 GTGGATCTCGACCCTTGCATA 59.587 52.381 0.00 0.00 0.00 3.14
3462 5296 0.179000 GTGGATCTCGACCCTTGCAT 59.821 55.000 0.00 0.00 0.00 3.96
3463 5297 1.596934 GTGGATCTCGACCCTTGCA 59.403 57.895 0.00 0.00 0.00 4.08
3468 5302 1.033746 TACGTGGTGGATCTCGACCC 61.034 60.000 8.65 0.72 43.12 4.46
3499 5333 1.140852 TCATCTTCCGTGGCCTTATGG 59.859 52.381 3.32 0.00 0.00 2.74
3500 5334 2.620251 TCATCTTCCGTGGCCTTATG 57.380 50.000 3.32 0.00 0.00 1.90
3501 5335 2.746472 GCTTCATCTTCCGTGGCCTTAT 60.746 50.000 3.32 0.00 0.00 1.73
3502 5336 1.406887 GCTTCATCTTCCGTGGCCTTA 60.407 52.381 3.32 0.00 0.00 2.69
3503 5337 0.678048 GCTTCATCTTCCGTGGCCTT 60.678 55.000 3.32 0.00 0.00 4.35
3504 5338 1.078143 GCTTCATCTTCCGTGGCCT 60.078 57.895 3.32 0.00 0.00 5.19
3505 5339 2.115291 GGCTTCATCTTCCGTGGCC 61.115 63.158 0.00 0.00 0.00 5.36
3506 5340 0.960364 TTGGCTTCATCTTCCGTGGC 60.960 55.000 0.00 0.00 0.00 5.01
3507 5341 1.672881 GATTGGCTTCATCTTCCGTGG 59.327 52.381 0.00 0.00 0.00 4.94
3508 5342 2.353889 CAGATTGGCTTCATCTTCCGTG 59.646 50.000 0.00 0.00 0.00 4.94
3509 5343 2.636830 CAGATTGGCTTCATCTTCCGT 58.363 47.619 0.00 0.00 0.00 4.69
3510 5344 1.332997 GCAGATTGGCTTCATCTTCCG 59.667 52.381 0.00 0.00 0.00 4.30
3511 5345 1.332997 CGCAGATTGGCTTCATCTTCC 59.667 52.381 0.00 0.00 0.00 3.46
3512 5346 1.332997 CCGCAGATTGGCTTCATCTTC 59.667 52.381 0.00 0.00 0.00 2.87
3513 5347 1.386533 CCGCAGATTGGCTTCATCTT 58.613 50.000 0.00 0.00 0.00 2.40
3514 5348 3.091318 CCGCAGATTGGCTTCATCT 57.909 52.632 0.00 0.00 0.00 2.90
3555 5389 9.751542 AATAGTACTTTCAAATAGAGATCGTGG 57.248 33.333 0.00 0.00 0.00 4.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.