Multiple sequence alignment - TraesCS5D01G303400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G303400 chr5D 100.000 5655 0 0 1 5655 399144475 399150129 0.000000e+00 10443.0
1 TraesCS5D01G303400 chr5B 91.183 2189 100 35 3328 5458 479321868 479324021 0.000000e+00 2887.0
2 TraesCS5D01G303400 chr5B 92.430 1572 77 23 599 2159 479319288 479320828 0.000000e+00 2206.0
3 TraesCS5D01G303400 chr5B 94.995 1019 35 8 2318 3329 479320827 479321836 0.000000e+00 1585.0
4 TraesCS5D01G303400 chr5B 92.375 459 33 2 1 457 479318139 479318597 0.000000e+00 652.0
5 TraesCS5D01G303400 chr5B 97.531 162 4 0 2158 2319 490757412 490757573 1.550000e-70 278.0
6 TraesCS5D01G303400 chr5B 88.325 197 7 6 5278 5458 711878755 711878559 7.370000e-54 222.0
7 TraesCS5D01G303400 chr5B 91.781 146 9 2 5449 5593 479324046 479324189 3.460000e-47 200.0
8 TraesCS5D01G303400 chr5B 81.707 164 18 10 5487 5650 711878488 711878337 5.950000e-25 126.0
9 TraesCS5D01G303400 chr5A 90.999 1511 96 14 656 2159 504765112 504766589 0.000000e+00 2001.0
10 TraesCS5D01G303400 chr5A 85.442 1051 87 27 2318 3325 504766588 504767615 0.000000e+00 1033.0
11 TraesCS5D01G303400 chr5A 92.295 584 39 4 3508 4085 504767956 504768539 0.000000e+00 824.0
12 TraesCS5D01G303400 chr5A 88.907 622 44 15 4320 4930 504768545 504769152 0.000000e+00 743.0
13 TraesCS5D01G303400 chr5A 81.250 400 42 23 5167 5556 504769441 504769817 5.540000e-75 292.0
14 TraesCS5D01G303400 chr5A 87.568 185 20 2 3328 3511 504767652 504767834 1.600000e-50 211.0
15 TraesCS5D01G303400 chr5A 94.667 75 3 1 1 75 504758422 504758495 1.290000e-21 115.0
16 TraesCS5D01G303400 chr5A 87.500 96 12 0 422 517 504764463 504764558 1.670000e-20 111.0
17 TraesCS5D01G303400 chr5A 81.356 118 5 5 5548 5648 504772532 504772649 4.700000e-11 80.5
18 TraesCS5D01G303400 chrUn 96.407 167 5 1 2158 2323 141680746 141680912 2.010000e-69 274.0
19 TraesCS5D01G303400 chr7B 96.386 166 6 0 2158 2323 11441143 11441308 2.010000e-69 274.0
20 TraesCS5D01G303400 chr7B 93.220 177 11 1 2158 2333 583372853 583373029 5.620000e-65 259.0
21 TraesCS5D01G303400 chr6D 96.951 164 4 1 2158 2321 21052131 21051969 2.010000e-69 274.0
22 TraesCS5D01G303400 chr4A 96.364 165 6 0 2158 2322 517406632 517406468 7.220000e-69 272.0
23 TraesCS5D01G303400 chr3B 94.382 178 9 1 2148 2324 23408580 23408403 7.220000e-69 272.0
24 TraesCS5D01G303400 chr2D 95.858 169 5 2 2154 2322 624881783 624881949 7.220000e-69 272.0
25 TraesCS5D01G303400 chr2B 96.364 165 6 0 2158 2322 66994644 66994808 7.220000e-69 272.0
26 TraesCS5D01G303400 chr1A 82.716 81 11 3 520 598 522963742 522963663 1.020000e-07 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G303400 chr5D 399144475 399150129 5654 False 10443.0000 10443 100.000000 1 5655 1 chr5D.!!$F1 5654
1 TraesCS5D01G303400 chr5B 479318139 479324189 6050 False 1506.0000 2887 92.552800 1 5593 5 chr5B.!!$F2 5592
2 TraesCS5D01G303400 chr5A 504764463 504772649 8186 False 661.9375 2001 86.914625 422 5648 8 chr5A.!!$F2 5226

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
378 380 0.165944 CGGTCTGGTAAAGCTTTGCG 59.834 55.000 22.02 8.74 0.00 4.85 F
835 1992 0.253020 AAACCCATCCCTAGACCCGT 60.253 55.000 0.00 0.00 0.00 5.28 F
905 2062 1.595466 ACAACGCAATTACCGAACCA 58.405 45.000 4.88 0.00 0.00 3.67 F
1627 2793 1.800315 GCTTGATGCTGCAGTTGCG 60.800 57.895 16.64 0.72 45.83 4.85 F
3154 4379 0.472925 TCCTGGGTACAGCCAGTCAA 60.473 55.000 22.40 8.13 43.53 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2082 3249 0.035439 AGTGGTGGGCGGTCATTAAG 60.035 55.000 0.0 0.0 0.0 1.85 R
2092 3268 0.036765 TGAATACGTCAGTGGTGGGC 60.037 55.000 0.0 0.0 0.0 5.36 R
2159 3335 1.209504 TGCATTTAGGAACGGAGGGAG 59.790 52.381 0.0 0.0 0.0 4.30 R
3475 4743 1.077212 CTCCTGTGCTCAATGGGGG 60.077 63.158 0.0 0.0 0.0 5.40 R
4748 6163 0.603707 CGGCAGCCAGACTCTTTTGA 60.604 55.000 13.3 0.0 0.0 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 4.699637 TGGAACTAGTATTTGGCCATACG 58.300 43.478 6.09 0.00 35.15 3.06
59 60 4.023536 TCCTAAATGTCAAAAACAGTCGCC 60.024 41.667 0.00 0.00 42.37 5.54
63 64 0.741915 GTCAAAAACAGTCGCCCCAA 59.258 50.000 0.00 0.00 0.00 4.12
76 77 2.510382 TCGCCCCAATTTACCCAATAGA 59.490 45.455 0.00 0.00 0.00 1.98
140 141 5.899299 AGATATTTCAAATGCAGTTGAGGC 58.101 37.500 26.36 15.87 38.69 4.70
206 207 3.528370 CTCCCTTCGGCGGATCGT 61.528 66.667 7.21 0.00 0.00 3.73
221 222 3.144506 GGATCGTGGTAGAGACGGATTA 58.855 50.000 0.00 0.00 37.43 1.75
285 286 2.037144 ACCCCATTACGCTTCGAGTAT 58.963 47.619 0.00 0.00 0.00 2.12
287 288 2.035449 CCCCATTACGCTTCGAGTATCA 59.965 50.000 0.00 0.00 33.17 2.15
290 291 2.857592 TTACGCTTCGAGTATCACCC 57.142 50.000 0.00 0.00 33.17 4.61
291 292 1.753930 TACGCTTCGAGTATCACCCA 58.246 50.000 0.00 0.00 33.17 4.51
311 313 5.011023 ACCCAGTGAGAAAATCATGGAAAAC 59.989 40.000 0.00 0.00 40.92 2.43
367 369 3.626924 GGTGAGCCACGGTCTGGT 61.627 66.667 0.00 0.00 42.99 4.00
378 380 0.165944 CGGTCTGGTAAAGCTTTGCG 59.834 55.000 22.02 8.74 0.00 4.85
379 381 1.519408 GGTCTGGTAAAGCTTTGCGA 58.481 50.000 22.02 16.25 0.00 5.10
383 385 2.037251 TCTGGTAAAGCTTTGCGAGACT 59.963 45.455 28.92 3.35 34.04 3.24
388 390 0.886490 AAGCTTTGCGAGACTGTGGG 60.886 55.000 0.00 0.00 0.00 4.61
454 456 2.833943 CCTGGCTTAAGAATTTTGCCCT 59.166 45.455 6.67 0.00 42.13 5.19
464 1111 0.620030 ATTTTGCCCTGGGAATTGCC 59.380 50.000 19.27 9.44 0.00 4.52
482 1129 4.937201 TGCCGACACTATGAACTATGAT 57.063 40.909 0.00 0.00 0.00 2.45
501 1240 9.765795 ACTATGATTGTAACTCTATTGCTAACC 57.234 33.333 0.00 0.00 0.00 2.85
502 1241 9.764363 CTATGATTGTAACTCTATTGCTAACCA 57.236 33.333 0.00 0.00 0.00 3.67
503 1242 7.843490 TGATTGTAACTCTATTGCTAACCAC 57.157 36.000 0.00 0.00 0.00 4.16
504 1243 7.390823 TGATTGTAACTCTATTGCTAACCACA 58.609 34.615 0.00 0.00 0.00 4.17
505 1244 8.046708 TGATTGTAACTCTATTGCTAACCACAT 58.953 33.333 0.00 0.00 0.00 3.21
506 1245 9.542462 GATTGTAACTCTATTGCTAACCACATA 57.458 33.333 0.00 0.00 0.00 2.29
507 1246 8.712285 TTGTAACTCTATTGCTAACCACATAC 57.288 34.615 0.00 0.00 0.00 2.39
508 1247 8.074613 TGTAACTCTATTGCTAACCACATACT 57.925 34.615 0.00 0.00 0.00 2.12
509 1248 8.195436 TGTAACTCTATTGCTAACCACATACTC 58.805 37.037 0.00 0.00 0.00 2.59
510 1249 6.163135 ACTCTATTGCTAACCACATACTCC 57.837 41.667 0.00 0.00 0.00 3.85
511 1250 5.661312 ACTCTATTGCTAACCACATACTCCA 59.339 40.000 0.00 0.00 0.00 3.86
512 1251 6.327626 ACTCTATTGCTAACCACATACTCCAT 59.672 38.462 0.00 0.00 0.00 3.41
513 1252 6.759272 TCTATTGCTAACCACATACTCCATC 58.241 40.000 0.00 0.00 0.00 3.51
514 1253 3.838244 TGCTAACCACATACTCCATCC 57.162 47.619 0.00 0.00 0.00 3.51
515 1254 2.102420 TGCTAACCACATACTCCATCCG 59.898 50.000 0.00 0.00 0.00 4.18
516 1255 2.102588 GCTAACCACATACTCCATCCGT 59.897 50.000 0.00 0.00 0.00 4.69
517 1256 3.431766 GCTAACCACATACTCCATCCGTT 60.432 47.826 0.00 0.00 0.00 4.44
518 1257 2.981859 ACCACATACTCCATCCGTTC 57.018 50.000 0.00 0.00 0.00 3.95
519 1258 1.485066 ACCACATACTCCATCCGTTCC 59.515 52.381 0.00 0.00 0.00 3.62
520 1259 1.484653 CCACATACTCCATCCGTTCCA 59.515 52.381 0.00 0.00 0.00 3.53
521 1260 2.104792 CCACATACTCCATCCGTTCCAT 59.895 50.000 0.00 0.00 0.00 3.41
522 1261 3.323691 CCACATACTCCATCCGTTCCATA 59.676 47.826 0.00 0.00 0.00 2.74
523 1262 4.020218 CCACATACTCCATCCGTTCCATAT 60.020 45.833 0.00 0.00 0.00 1.78
524 1263 5.513094 CCACATACTCCATCCGTTCCATATT 60.513 44.000 0.00 0.00 0.00 1.28
525 1264 5.409520 CACATACTCCATCCGTTCCATATTG 59.590 44.000 0.00 0.00 0.00 1.90
526 1265 5.071788 ACATACTCCATCCGTTCCATATTGT 59.928 40.000 0.00 0.00 0.00 2.71
527 1266 6.269077 ACATACTCCATCCGTTCCATATTGTA 59.731 38.462 0.00 0.00 0.00 2.41
528 1267 5.623956 ACTCCATCCGTTCCATATTGTAA 57.376 39.130 0.00 0.00 0.00 2.41
529 1268 5.611374 ACTCCATCCGTTCCATATTGTAAG 58.389 41.667 0.00 0.00 0.00 2.34
530 1269 5.365605 ACTCCATCCGTTCCATATTGTAAGA 59.634 40.000 0.00 0.00 0.00 2.10
531 1270 6.043243 ACTCCATCCGTTCCATATTGTAAGAT 59.957 38.462 0.00 0.00 0.00 2.40
532 1271 6.230472 TCCATCCGTTCCATATTGTAAGATG 58.770 40.000 0.00 0.00 0.00 2.90
533 1272 5.997746 CCATCCGTTCCATATTGTAAGATGT 59.002 40.000 0.00 0.00 0.00 3.06
534 1273 6.486657 CCATCCGTTCCATATTGTAAGATGTT 59.513 38.462 0.00 0.00 0.00 2.71
535 1274 7.659799 CCATCCGTTCCATATTGTAAGATGTTA 59.340 37.037 0.00 0.00 0.00 2.41
536 1275 9.219603 CATCCGTTCCATATTGTAAGATGTTAT 57.780 33.333 0.00 0.00 0.00 1.89
537 1276 9.793259 ATCCGTTCCATATTGTAAGATGTTATT 57.207 29.630 0.00 0.00 0.00 1.40
543 1282 9.701098 TCCATATTGTAAGATGTTATTACGTCC 57.299 33.333 0.00 0.00 40.51 4.79
544 1283 9.483916 CCATATTGTAAGATGTTATTACGTCCA 57.516 33.333 0.00 0.00 40.51 4.02
548 1287 8.780846 TTGTAAGATGTTATTACGTCCAATGT 57.219 30.769 0.00 0.00 40.51 2.71
549 1288 9.872721 TTGTAAGATGTTATTACGTCCAATGTA 57.127 29.630 0.00 0.00 40.51 2.29
550 1289 9.304731 TGTAAGATGTTATTACGTCCAATGTAC 57.695 33.333 0.00 0.00 40.51 2.90
551 1290 9.525409 GTAAGATGTTATTACGTCCAATGTACT 57.475 33.333 0.00 0.00 40.51 2.73
552 1291 8.644318 AAGATGTTATTACGTCCAATGTACTC 57.356 34.615 0.00 0.00 40.51 2.59
553 1292 7.778083 AGATGTTATTACGTCCAATGTACTCA 58.222 34.615 0.00 0.00 40.51 3.41
554 1293 7.705325 AGATGTTATTACGTCCAATGTACTCAC 59.295 37.037 0.00 0.00 40.51 3.51
555 1294 6.689554 TGTTATTACGTCCAATGTACTCACA 58.310 36.000 0.00 0.00 39.52 3.58
557 1296 8.468399 TGTTATTACGTCCAATGTACTCACATA 58.532 33.333 0.00 0.00 44.83 2.29
558 1297 9.472361 GTTATTACGTCCAATGTACTCACATAT 57.528 33.333 0.00 0.00 44.83 1.78
561 1300 9.692749 ATTACGTCCAATGTACTCACATATTAG 57.307 33.333 0.00 0.00 44.83 1.73
562 1301 7.342769 ACGTCCAATGTACTCACATATTAGA 57.657 36.000 0.00 0.00 44.83 2.10
563 1302 7.952671 ACGTCCAATGTACTCACATATTAGAT 58.047 34.615 0.00 0.00 44.83 1.98
564 1303 9.074576 ACGTCCAATGTACTCACATATTAGATA 57.925 33.333 0.00 0.00 44.83 1.98
565 1304 9.343103 CGTCCAATGTACTCACATATTAGATAC 57.657 37.037 0.00 0.00 44.83 2.24
653 1392 1.846007 ACAGTTTTGAACAGGGCACA 58.154 45.000 0.00 0.00 0.00 4.57
654 1393 1.476488 ACAGTTTTGAACAGGGCACAC 59.524 47.619 0.00 0.00 0.00 3.82
663 1820 4.314440 AGGGCACACACGCGATGT 62.314 61.111 15.93 14.52 44.81 3.06
727 1884 4.077184 TCCGGCGTGATGTCACCC 62.077 66.667 6.01 8.58 43.66 4.61
747 1904 1.450312 GCCAATGAGAGTGTCCCGG 60.450 63.158 0.00 0.00 0.00 5.73
788 1945 1.355971 GCAGTCGCGTTTATCCAGAA 58.644 50.000 5.77 0.00 0.00 3.02
790 1947 2.351726 GCAGTCGCGTTTATCCAGAATT 59.648 45.455 5.77 0.00 0.00 2.17
828 1985 3.009033 CAGTTCTCACAAACCCATCCCTA 59.991 47.826 0.00 0.00 0.00 3.53
835 1992 0.253020 AAACCCATCCCTAGACCCGT 60.253 55.000 0.00 0.00 0.00 5.28
839 1996 1.690209 CCCATCCCTAGACCCGTTGTA 60.690 57.143 0.00 0.00 0.00 2.41
905 2062 1.595466 ACAACGCAATTACCGAACCA 58.405 45.000 4.88 0.00 0.00 3.67
1065 2229 3.069318 AACCTCCTCCTCGCGGTC 61.069 66.667 6.13 0.00 0.00 4.79
1080 2244 3.749064 GTCGCTCTCCTGTCGGCA 61.749 66.667 0.00 0.00 0.00 5.69
1095 2259 1.992277 GGCAGCTCTCCTCCTTCCA 60.992 63.158 0.00 0.00 0.00 3.53
1260 2424 3.437795 GAGGACGACTTCGCGGGA 61.438 66.667 6.13 0.00 44.43 5.14
1337 2502 4.483950 CAACCCCCTCAGATAGTCAGATA 58.516 47.826 0.00 0.00 0.00 1.98
1338 2503 4.120946 ACCCCCTCAGATAGTCAGATAC 57.879 50.000 0.00 0.00 0.00 2.24
1339 2504 3.730059 ACCCCCTCAGATAGTCAGATACT 59.270 47.826 0.00 0.00 42.62 2.12
1340 2505 4.202631 ACCCCCTCAGATAGTCAGATACTC 60.203 50.000 0.00 0.00 39.80 2.59
1341 2506 4.202620 CCCCCTCAGATAGTCAGATACTCA 60.203 50.000 0.00 0.00 39.80 3.41
1342 2507 5.009631 CCCCTCAGATAGTCAGATACTCAG 58.990 50.000 0.00 0.00 39.80 3.35
1343 2508 5.222027 CCCCTCAGATAGTCAGATACTCAGA 60.222 48.000 0.00 0.00 39.80 3.27
1344 2509 6.484288 CCCTCAGATAGTCAGATACTCAGAT 58.516 44.000 0.00 0.00 39.80 2.90
1355 2520 7.387673 AGTCAGATACTCAGATTCTACGATCAG 59.612 40.741 0.00 0.00 30.33 2.90
1414 2579 3.027974 AGCGGAACTTCTCAACTGTAC 57.972 47.619 0.00 0.00 0.00 2.90
1496 2662 4.394729 TGGTTTTTAGTCAGGCTTTCGAT 58.605 39.130 0.00 0.00 0.00 3.59
1500 2666 6.206498 GTTTTTAGTCAGGCTTTCGATGTTT 58.794 36.000 0.00 0.00 0.00 2.83
1503 2669 7.681939 TTTAGTCAGGCTTTCGATGTTTTAT 57.318 32.000 0.00 0.00 0.00 1.40
1504 2670 7.681939 TTAGTCAGGCTTTCGATGTTTTATT 57.318 32.000 0.00 0.00 0.00 1.40
1505 2671 8.780846 TTAGTCAGGCTTTCGATGTTTTATTA 57.219 30.769 0.00 0.00 0.00 0.98
1506 2672 7.308782 AGTCAGGCTTTCGATGTTTTATTAG 57.691 36.000 0.00 0.00 0.00 1.73
1507 2673 6.879458 AGTCAGGCTTTCGATGTTTTATTAGT 59.121 34.615 0.00 0.00 0.00 2.24
1508 2674 6.961554 GTCAGGCTTTCGATGTTTTATTAGTG 59.038 38.462 0.00 0.00 0.00 2.74
1509 2675 6.093495 TCAGGCTTTCGATGTTTTATTAGTGG 59.907 38.462 0.00 0.00 0.00 4.00
1510 2676 5.034797 GGCTTTCGATGTTTTATTAGTGGC 58.965 41.667 0.00 0.00 0.00 5.01
1511 2677 5.163652 GGCTTTCGATGTTTTATTAGTGGCT 60.164 40.000 0.00 0.00 0.00 4.75
1512 2678 6.037830 GGCTTTCGATGTTTTATTAGTGGCTA 59.962 38.462 0.00 0.00 0.00 3.93
1513 2679 7.126398 GCTTTCGATGTTTTATTAGTGGCTAG 58.874 38.462 0.00 0.00 0.00 3.42
1539 2705 9.499479 GTACAGAATACAGTAGCTAGTACCATA 57.501 37.037 0.00 0.00 31.06 2.74
1615 2781 3.423539 TGTAGGAACTTGCAGCTTGAT 57.576 42.857 0.00 0.00 41.75 2.57
1627 2793 1.800315 GCTTGATGCTGCAGTTGCG 60.800 57.895 16.64 0.72 45.83 4.85
1642 2808 3.966218 CAGTTGCGCTGTAAACTTGTAAC 59.034 43.478 9.73 0.00 40.27 2.50
1690 2856 6.238320 GCTGCATTTTACTGAGTTCTATCTGG 60.238 42.308 0.00 0.00 0.00 3.86
1773 2939 2.279741 GCGGATGTGCAGAAGTTATCA 58.720 47.619 0.00 0.00 34.15 2.15
1821 2987 5.745514 CATGAGATTAAGGTGAGAAATGCG 58.254 41.667 0.00 0.00 0.00 4.73
1937 3103 2.566833 TTGGTCAGCTGCATTGTACT 57.433 45.000 9.47 0.00 0.00 2.73
1938 3104 2.566833 TGGTCAGCTGCATTGTACTT 57.433 45.000 9.47 0.00 0.00 2.24
1939 3105 2.153645 TGGTCAGCTGCATTGTACTTG 58.846 47.619 9.47 0.00 0.00 3.16
1940 3106 2.154462 GGTCAGCTGCATTGTACTTGT 58.846 47.619 9.47 0.00 0.00 3.16
1941 3107 3.244387 TGGTCAGCTGCATTGTACTTGTA 60.244 43.478 9.47 0.00 0.00 2.41
1942 3108 3.125316 GGTCAGCTGCATTGTACTTGTAC 59.875 47.826 9.47 4.14 0.00 2.90
1954 3120 7.381678 GCATTGTACTTGTACACTATACCTAGC 59.618 40.741 12.51 3.35 0.00 3.42
1973 3139 3.848726 AGCTGTTGAAGTGGTTTGTTTG 58.151 40.909 0.00 0.00 0.00 2.93
2003 3169 4.678287 CAGATGTGTGCTTGTTGTGATTTC 59.322 41.667 0.00 0.00 0.00 2.17
2024 3191 5.929697 TCGATTATCATCACATTTGCTCC 57.070 39.130 0.00 0.00 0.00 4.70
2092 3268 7.504924 TTTGCCTTAATATCCTTAATGACCG 57.495 36.000 0.00 0.00 0.00 4.79
2128 3304 8.791355 ACGTATTCATGTTTAAACTTTCCAAC 57.209 30.769 18.72 9.70 0.00 3.77
2159 3335 9.248291 CATTATGCCTTCCATTGTAATTGTTAC 57.752 33.333 0.00 0.00 35.34 2.50
2160 3336 8.588290 TTATGCCTTCCATTGTAATTGTTACT 57.412 30.769 2.04 0.00 34.99 2.24
2161 3337 6.509418 TGCCTTCCATTGTAATTGTTACTC 57.491 37.500 2.04 0.00 37.06 2.59
2162 3338 5.417580 TGCCTTCCATTGTAATTGTTACTCC 59.582 40.000 2.04 0.00 37.06 3.85
2163 3339 5.163550 GCCTTCCATTGTAATTGTTACTCCC 60.164 44.000 2.04 0.00 37.06 4.30
2164 3340 6.187682 CCTTCCATTGTAATTGTTACTCCCT 58.812 40.000 2.04 0.00 37.06 4.20
2165 3341 6.318900 CCTTCCATTGTAATTGTTACTCCCTC 59.681 42.308 2.04 0.00 37.06 4.30
2166 3342 5.751586 TCCATTGTAATTGTTACTCCCTCC 58.248 41.667 2.04 0.00 37.06 4.30
2167 3343 4.574828 CCATTGTAATTGTTACTCCCTCCG 59.425 45.833 2.04 0.00 37.06 4.63
2168 3344 4.895668 TTGTAATTGTTACTCCCTCCGT 57.104 40.909 2.04 0.00 37.06 4.69
2169 3345 4.895668 TGTAATTGTTACTCCCTCCGTT 57.104 40.909 2.04 0.00 37.06 4.44
2170 3346 4.824289 TGTAATTGTTACTCCCTCCGTTC 58.176 43.478 2.04 0.00 37.06 3.95
2171 3347 3.345508 AATTGTTACTCCCTCCGTTCC 57.654 47.619 0.00 0.00 0.00 3.62
2172 3348 2.019807 TTGTTACTCCCTCCGTTCCT 57.980 50.000 0.00 0.00 0.00 3.36
2173 3349 2.905415 TGTTACTCCCTCCGTTCCTA 57.095 50.000 0.00 0.00 0.00 2.94
2174 3350 3.173953 TGTTACTCCCTCCGTTCCTAA 57.826 47.619 0.00 0.00 0.00 2.69
2175 3351 3.509442 TGTTACTCCCTCCGTTCCTAAA 58.491 45.455 0.00 0.00 0.00 1.85
2176 3352 4.098894 TGTTACTCCCTCCGTTCCTAAAT 58.901 43.478 0.00 0.00 0.00 1.40
2177 3353 4.081309 TGTTACTCCCTCCGTTCCTAAATG 60.081 45.833 0.00 0.00 0.00 2.32
2178 3354 1.209747 ACTCCCTCCGTTCCTAAATGC 59.790 52.381 0.00 0.00 0.00 3.56
2179 3355 1.209504 CTCCCTCCGTTCCTAAATGCA 59.790 52.381 0.00 0.00 0.00 3.96
2180 3356 1.631388 TCCCTCCGTTCCTAAATGCAA 59.369 47.619 0.00 0.00 0.00 4.08
2181 3357 2.017049 CCCTCCGTTCCTAAATGCAAG 58.983 52.381 0.00 0.00 0.00 4.01
2182 3358 2.618045 CCCTCCGTTCCTAAATGCAAGT 60.618 50.000 0.00 0.00 0.00 3.16
2183 3359 2.678336 CCTCCGTTCCTAAATGCAAGTC 59.322 50.000 0.00 0.00 0.00 3.01
2184 3360 3.600388 CTCCGTTCCTAAATGCAAGTCT 58.400 45.455 0.00 0.00 0.00 3.24
2185 3361 4.003648 CTCCGTTCCTAAATGCAAGTCTT 58.996 43.478 0.00 0.00 0.00 3.01
2186 3362 4.394729 TCCGTTCCTAAATGCAAGTCTTT 58.605 39.130 0.00 0.00 0.00 2.52
2187 3363 4.825085 TCCGTTCCTAAATGCAAGTCTTTT 59.175 37.500 0.00 0.00 0.00 2.27
2188 3364 5.300792 TCCGTTCCTAAATGCAAGTCTTTTT 59.699 36.000 0.00 0.00 0.00 1.94
2189 3365 6.487331 TCCGTTCCTAAATGCAAGTCTTTTTA 59.513 34.615 0.00 0.00 0.00 1.52
2190 3366 6.801862 CCGTTCCTAAATGCAAGTCTTTTTAG 59.198 38.462 7.85 7.85 0.00 1.85
2191 3367 7.308348 CCGTTCCTAAATGCAAGTCTTTTTAGA 60.308 37.037 14.10 1.97 0.00 2.10
2192 3368 7.746475 CGTTCCTAAATGCAAGTCTTTTTAGAG 59.254 37.037 14.10 6.94 0.00 2.43
2193 3369 8.784043 GTTCCTAAATGCAAGTCTTTTTAGAGA 58.216 33.333 14.10 8.58 0.00 3.10
2194 3370 9.520515 TTCCTAAATGCAAGTCTTTTTAGAGAT 57.479 29.630 14.10 0.00 0.00 2.75
2195 3371 9.520515 TCCTAAATGCAAGTCTTTTTAGAGATT 57.479 29.630 14.10 0.00 0.00 2.40
2196 3372 9.780413 CCTAAATGCAAGTCTTTTTAGAGATTC 57.220 33.333 14.10 0.00 0.00 2.52
2197 3373 9.780413 CTAAATGCAAGTCTTTTTAGAGATTCC 57.220 33.333 8.83 0.00 0.00 3.01
2198 3374 7.765695 AATGCAAGTCTTTTTAGAGATTCCA 57.234 32.000 0.00 0.00 0.00 3.53
2199 3375 6.560253 TGCAAGTCTTTTTAGAGATTCCAC 57.440 37.500 0.00 0.00 0.00 4.02
2200 3376 6.299141 TGCAAGTCTTTTTAGAGATTCCACT 58.701 36.000 0.00 0.00 0.00 4.00
2201 3377 7.450074 TGCAAGTCTTTTTAGAGATTCCACTA 58.550 34.615 0.00 0.00 0.00 2.74
2202 3378 7.387948 TGCAAGTCTTTTTAGAGATTCCACTAC 59.612 37.037 0.00 0.00 0.00 2.73
2203 3379 7.387948 GCAAGTCTTTTTAGAGATTCCACTACA 59.612 37.037 0.00 0.00 0.00 2.74
2204 3380 9.273016 CAAGTCTTTTTAGAGATTCCACTACAA 57.727 33.333 0.00 0.00 0.00 2.41
2205 3381 9.847224 AAGTCTTTTTAGAGATTCCACTACAAA 57.153 29.630 0.00 0.00 0.00 2.83
2206 3382 9.274206 AGTCTTTTTAGAGATTCCACTACAAAC 57.726 33.333 0.00 0.00 0.00 2.93
2207 3383 9.274206 GTCTTTTTAGAGATTCCACTACAAACT 57.726 33.333 0.00 0.00 0.00 2.66
2214 3390 7.481642 AGAGATTCCACTACAAACTACATACG 58.518 38.462 0.00 0.00 0.00 3.06
2215 3391 6.570692 AGATTCCACTACAAACTACATACGG 58.429 40.000 0.00 0.00 0.00 4.02
2216 3392 5.981088 TTCCACTACAAACTACATACGGA 57.019 39.130 0.00 0.00 0.00 4.69
2217 3393 6.534475 TTCCACTACAAACTACATACGGAT 57.466 37.500 0.00 0.00 0.00 4.18
2218 3394 5.898174 TCCACTACAAACTACATACGGATG 58.102 41.667 5.94 5.94 39.16 3.51
2220 3396 6.602803 TCCACTACAAACTACATACGGATGTA 59.397 38.462 19.32 19.32 44.77 2.29
2221 3397 7.286087 TCCACTACAAACTACATACGGATGTAT 59.714 37.037 20.64 8.38 45.42 2.29
2222 3398 8.570488 CCACTACAAACTACATACGGATGTATA 58.430 37.037 20.64 9.08 45.42 1.47
2260 3436 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
2261 3437 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
2262 3438 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
2263 3439 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
2264 3440 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
2265 3441 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
2266 3442 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
2267 3443 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
2268 3444 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
2269 3445 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
2270 3446 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
2271 3447 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
2272 3448 4.439057 TCATTTTGCTCCGTATGTAGTCC 58.561 43.478 0.00 0.00 0.00 3.85
2273 3449 3.965379 TTTTGCTCCGTATGTAGTCCA 57.035 42.857 0.00 0.00 0.00 4.02
2274 3450 4.481368 TTTTGCTCCGTATGTAGTCCAT 57.519 40.909 0.00 0.00 37.58 3.41
2275 3451 5.601583 TTTTGCTCCGTATGTAGTCCATA 57.398 39.130 0.00 0.00 34.86 2.74
2276 3452 4.848562 TTGCTCCGTATGTAGTCCATAG 57.151 45.455 0.00 0.00 36.71 2.23
2277 3453 3.828921 TGCTCCGTATGTAGTCCATAGT 58.171 45.455 0.00 0.00 36.71 2.12
2278 3454 3.568430 TGCTCCGTATGTAGTCCATAGTG 59.432 47.826 0.00 0.00 36.71 2.74
2279 3455 3.057456 GCTCCGTATGTAGTCCATAGTGG 60.057 52.174 0.00 0.00 36.71 4.00
2280 3456 4.395625 CTCCGTATGTAGTCCATAGTGGA 58.604 47.826 0.00 0.00 45.98 4.02
2293 3469 6.874278 TCCATAGTGGAATCTCTGAAAAGA 57.126 37.500 0.00 0.00 45.00 2.52
2294 3470 6.644347 TCCATAGTGGAATCTCTGAAAAGAC 58.356 40.000 0.00 0.00 45.00 3.01
2295 3471 6.441924 TCCATAGTGGAATCTCTGAAAAGACT 59.558 38.462 0.00 0.00 45.00 3.24
2296 3472 7.038017 TCCATAGTGGAATCTCTGAAAAGACTT 60.038 37.037 0.00 0.00 45.00 3.01
2297 3473 8.260818 CCATAGTGGAATCTCTGAAAAGACTTA 58.739 37.037 0.00 0.00 40.96 2.24
2298 3474 9.829507 CATAGTGGAATCTCTGAAAAGACTTAT 57.170 33.333 0.00 0.00 0.00 1.73
2310 3486 9.595823 TCTGAAAAGACTTATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
2311 3487 9.595823 CTGAAAAGACTTATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
2312 3488 9.595823 TGAAAAGACTTATATTTAGGAACGGAG 57.404 33.333 0.00 0.00 0.00 4.63
2313 3489 8.959705 AAAAGACTTATATTTAGGAACGGAGG 57.040 34.615 0.00 0.00 0.00 4.30
2314 3490 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
2315 3491 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
2316 3492 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
2317 3493 6.141790 ACTTATATTTAGGAACGGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
2318 3494 7.300658 ACTTATATTTAGGAACGGAGGGAGTA 58.699 38.462 0.00 0.00 0.00 2.59
2327 3503 4.283722 GGAACGGAGGGAGTATATGTCAAT 59.716 45.833 0.00 0.00 0.00 2.57
2406 3586 5.221702 TGCTAACTAGATGAGGCATGCATTA 60.222 40.000 21.36 10.19 0.00 1.90
2427 3607 9.435688 GCATTATTTTGGGAACTGAGTTTTATT 57.564 29.630 0.00 0.00 0.00 1.40
3038 4263 5.181009 TCTGAAACTGTATCTTGCTCATGG 58.819 41.667 0.00 0.00 0.00 3.66
3079 4304 0.840288 AAATTGGGGGCCTTGTTCCC 60.840 55.000 0.84 4.58 43.15 3.97
3154 4379 0.472925 TCCTGGGTACAGCCAGTCAA 60.473 55.000 22.40 8.13 43.53 3.18
3186 4411 1.075374 TGTCCAAAGCCAGGTAATGCT 59.925 47.619 0.00 0.00 40.17 3.79
3190 4415 3.953612 TCCAAAGCCAGGTAATGCTATTG 59.046 43.478 0.00 0.00 36.66 1.90
3196 4421 3.402110 CCAGGTAATGCTATTGATCGCA 58.598 45.455 0.00 0.00 40.87 5.10
3220 4446 5.754890 ACACAAAGGAGCATTTTGATTCAAC 59.245 36.000 12.59 0.00 38.55 3.18
3262 4488 7.042725 TGCAGAGTATAACGCTTCATTAATCAC 60.043 37.037 0.00 0.00 0.00 3.06
3325 4559 4.384547 GTGTGGTTTCTGTGTTGTTCAAAC 59.615 41.667 0.00 0.00 0.00 2.93
3388 4656 6.763135 GTCTCTCATTTCACCATTGCTATACA 59.237 38.462 0.00 0.00 0.00 2.29
3394 4662 5.585820 TTCACCATTGCTATACACTCGTA 57.414 39.130 0.00 0.00 0.00 3.43
3412 4680 7.091443 CACTCGTAGTGGTTTCTTCTATTCTT 58.909 38.462 7.01 0.00 42.35 2.52
3415 4683 8.530269 TCGTAGTGGTTTCTTCTATTCTTTTC 57.470 34.615 0.00 0.00 0.00 2.29
3457 4725 5.127519 TGTGCATGCCATTTTATTAAGAGCT 59.872 36.000 16.68 0.00 0.00 4.09
3463 4731 8.761497 CATGCCATTTTATTAAGAGCTGATTTG 58.239 33.333 0.00 0.00 0.00 2.32
3475 4743 5.947443 AGAGCTGATTTGCTTGTATGTTTC 58.053 37.500 0.00 0.00 44.17 2.78
3481 4749 2.917713 TGCTTGTATGTTTCCCCCAT 57.082 45.000 0.00 0.00 0.00 4.00
3544 4945 8.408043 AATCATTTTCTGTTCTAACCATGTCA 57.592 30.769 0.00 0.00 0.00 3.58
3545 4946 7.202016 TCATTTTCTGTTCTAACCATGTCAC 57.798 36.000 0.00 0.00 0.00 3.67
3566 4967 3.002656 ACATGTGCTGACTGTTTCTTTCG 59.997 43.478 0.00 0.00 0.00 3.46
3681 5082 8.887717 GCTATATCGGCTTTGATCAGAAATAAT 58.112 33.333 0.00 0.00 0.00 1.28
3708 5109 1.003580 GGTCAGGAGGCATTCACTTCA 59.996 52.381 0.00 0.00 0.00 3.02
3765 5166 5.708736 TCCTATCTTGGGAATACAAGCAA 57.291 39.130 0.00 0.00 45.72 3.91
3826 5229 3.261897 AGCACATACTAGGAAGCAACAGT 59.738 43.478 0.00 0.00 0.00 3.55
3961 5364 7.196331 TGAAGTCAGTCACTGATATGTTATCG 58.804 38.462 11.62 0.00 42.73 2.92
4031 5438 9.722056 CTTCAGTTTTGTAGCCATTATGATTAC 57.278 33.333 0.00 0.00 0.00 1.89
4032 5439 9.461312 TTCAGTTTTGTAGCCATTATGATTACT 57.539 29.630 0.00 0.00 0.00 2.24
4094 5501 3.279434 GTTCCTTGTGTGGACTTGTCTT 58.721 45.455 0.61 0.00 35.58 3.01
4178 5585 9.048446 GCATGGATTTTATTGTTCAATGCTATT 57.952 29.630 8.11 0.00 41.55 1.73
4200 5607 2.924185 GCTCTCAGCAAGCACTTGA 58.076 52.632 14.44 0.00 42.93 3.02
4209 5616 2.954318 AGCAAGCACTTGACAAGAATGT 59.046 40.909 21.95 0.00 42.93 2.71
4211 5618 3.488310 GCAAGCACTTGACAAGAATGTTG 59.512 43.478 21.95 17.28 42.93 3.33
4218 5625 6.634436 GCACTTGACAAGAATGTTGTAGAAAG 59.366 38.462 21.95 3.96 40.74 2.62
4228 5635 8.045176 AGAATGTTGTAGAAAGGCAAGTATTC 57.955 34.615 0.00 0.00 33.86 1.75
4233 5640 6.614694 TGTAGAAAGGCAAGTATTCCTACA 57.385 37.500 0.00 0.00 31.24 2.74
4259 5666 5.607477 TGTCAAGGAATGAAAGTAACGACT 58.393 37.500 0.00 0.00 40.50 4.18
4260 5667 6.751157 TGTCAAGGAATGAAAGTAACGACTA 58.249 36.000 0.00 0.00 40.50 2.59
4261 5668 7.211573 TGTCAAGGAATGAAAGTAACGACTAA 58.788 34.615 0.00 0.00 40.50 2.24
4262 5669 7.384115 TGTCAAGGAATGAAAGTAACGACTAAG 59.616 37.037 0.00 0.00 40.50 2.18
4263 5670 7.384387 GTCAAGGAATGAAAGTAACGACTAAGT 59.616 37.037 0.00 0.00 40.50 2.24
4264 5671 7.384115 TCAAGGAATGAAAGTAACGACTAAGTG 59.616 37.037 0.00 0.00 34.30 3.16
4265 5672 5.638234 AGGAATGAAAGTAACGACTAAGTGC 59.362 40.000 0.00 0.00 33.58 4.40
4266 5673 5.407387 GGAATGAAAGTAACGACTAAGTGCA 59.593 40.000 0.00 0.00 33.58 4.57
4267 5674 5.840940 ATGAAAGTAACGACTAAGTGCAC 57.159 39.130 9.40 9.40 33.58 4.57
4268 5675 4.940463 TGAAAGTAACGACTAAGTGCACT 58.060 39.130 15.25 15.25 33.58 4.40
4270 5677 5.233476 TGAAAGTAACGACTAAGTGCACTTG 59.767 40.000 36.50 27.56 37.40 3.16
4271 5678 4.579454 AGTAACGACTAAGTGCACTTGA 57.421 40.909 36.50 21.13 37.40 3.02
4313 5724 2.834549 AGTAAGACCTGCACTGCTACAT 59.165 45.455 1.98 0.00 0.00 2.29
4317 5728 1.734465 GACCTGCACTGCTACATGTTC 59.266 52.381 2.30 0.00 0.00 3.18
4318 5729 0.723414 CCTGCACTGCTACATGTTCG 59.277 55.000 2.30 0.00 0.00 3.95
4331 5742 2.224523 ACATGTTCGGACTGACATTGGT 60.225 45.455 0.00 0.00 0.00 3.67
4390 5801 4.493747 CTTCCCTCGACGGACGCC 62.494 72.222 2.29 0.00 42.26 5.68
4542 5953 1.196354 CTTCCAACAGAAGCTCAAGCG 59.804 52.381 0.00 0.00 45.38 4.68
4565 5976 6.089820 GCGGGTAAATTAAGTTTTTACAAGCC 59.910 38.462 10.77 3.29 39.97 4.35
4568 5979 8.984764 GGGTAAATTAAGTTTTTACAAGCCTTG 58.015 33.333 2.11 2.11 39.97 3.61
4679 6094 0.878416 CGGATGAACGCAAGGGAAAA 59.122 50.000 0.00 0.00 46.39 2.29
4680 6095 1.401018 CGGATGAACGCAAGGGAAAAC 60.401 52.381 0.00 0.00 46.39 2.43
4681 6096 1.886542 GGATGAACGCAAGGGAAAACT 59.113 47.619 0.00 0.00 46.39 2.66
4689 6104 0.829182 CAAGGGAAAACTGGCAGGCT 60.829 55.000 20.34 2.05 0.00 4.58
4707 6122 2.755103 GGCTTTTCCGATCCAGTGAATT 59.245 45.455 0.00 0.00 0.00 2.17
4812 6229 4.628074 CGGAGGGTTATTATAGTGGTGTG 58.372 47.826 0.00 0.00 0.00 3.82
4845 6262 5.185249 TGCAACGATAGGTTAGAGAGACTTT 59.815 40.000 0.00 0.00 36.49 2.66
4895 6316 4.035675 GCATTTGCAGGACTAGTTATGACC 59.964 45.833 11.34 1.42 41.59 4.02
4925 6347 5.301805 TGTGTTTCTTGGGAGATTTCCTTTC 59.698 40.000 1.74 0.00 43.49 2.62
4928 6350 6.611236 TGTTTCTTGGGAGATTTCCTTTCTTT 59.389 34.615 1.74 0.00 43.49 2.52
4929 6351 7.782644 TGTTTCTTGGGAGATTTCCTTTCTTTA 59.217 33.333 1.74 0.00 43.49 1.85
4935 6385 6.490040 TGGGAGATTTCCTTTCTTTACTGTTG 59.510 38.462 1.74 0.00 43.49 3.33
4956 6408 6.972328 TGTTGTAGAAGTGCAAAAATGTCTTC 59.028 34.615 0.00 0.00 35.98 2.87
4957 6409 5.747565 TGTAGAAGTGCAAAAATGTCTTCG 58.252 37.500 0.00 0.00 39.28 3.79
4958 6410 4.900635 AGAAGTGCAAAAATGTCTTCGT 57.099 36.364 0.00 0.00 39.28 3.85
4959 6411 6.480651 TGTAGAAGTGCAAAAATGTCTTCGTA 59.519 34.615 0.00 0.00 39.28 3.43
4961 6413 6.373779 AGAAGTGCAAAAATGTCTTCGTATG 58.626 36.000 0.00 0.00 39.28 2.39
4962 6414 5.689383 AGTGCAAAAATGTCTTCGTATGT 57.311 34.783 0.00 0.00 0.00 2.29
4963 6415 6.795098 AGTGCAAAAATGTCTTCGTATGTA 57.205 33.333 0.00 0.00 0.00 2.29
4967 6419 7.898309 GTGCAAAAATGTCTTCGTATGTACTAG 59.102 37.037 0.00 0.00 0.00 2.57
4968 6420 6.900299 GCAAAAATGTCTTCGTATGTACTAGC 59.100 38.462 0.00 0.00 0.00 3.42
4969 6421 7.201530 GCAAAAATGTCTTCGTATGTACTAGCT 60.202 37.037 0.00 0.00 0.00 3.32
4971 6423 8.853469 AAAATGTCTTCGTATGTACTAGCTAC 57.147 34.615 0.00 0.00 0.00 3.58
4975 6427 8.843885 TGTCTTCGTATGTACTAGCTACATAT 57.156 34.615 19.29 0.00 45.88 1.78
4976 6428 9.933723 TGTCTTCGTATGTACTAGCTACATATA 57.066 33.333 19.29 12.62 45.88 0.86
4978 6430 9.597170 TCTTCGTATGTACTAGCTACATATAGG 57.403 37.037 19.29 14.52 45.88 2.57
4979 6431 9.381033 CTTCGTATGTACTAGCTACATATAGGT 57.619 37.037 19.29 0.00 45.88 3.08
5007 6459 5.653769 AGTAGCTCGTACAATGGGTTTAGTA 59.346 40.000 0.00 0.00 33.55 1.82
5058 6513 4.847198 TGCACTTTGAGATGATGTGGTAT 58.153 39.130 0.00 0.00 0.00 2.73
5067 6522 8.492673 TTGAGATGATGTGGTATTTGAACTAC 57.507 34.615 0.00 0.00 0.00 2.73
5194 6724 1.198397 GAACAGTCGCGTGTTCGTG 59.802 57.895 21.85 8.25 45.09 4.35
5197 6727 1.733041 CAGTCGCGTGTTCGTGGAT 60.733 57.895 5.77 0.00 45.94 3.41
5224 6759 4.517815 CGTTGGCATGGCATGGGC 62.518 66.667 27.48 19.83 40.13 5.36
5325 6861 2.505982 CCGATCCGTCCCTTGCAT 59.494 61.111 0.00 0.00 0.00 3.96
5328 6879 1.441729 GATCCGTCCCTTGCATCGA 59.558 57.895 0.00 0.00 0.00 3.59
5410 6961 4.504916 CTCGGGCCTCTCACGCTG 62.505 72.222 0.84 0.00 0.00 5.18
5416 6967 4.135153 CCTCTCACGCTGACCGGG 62.135 72.222 6.32 0.00 43.23 5.73
5464 7015 4.564116 CGGCGCACGGGTAGGTAG 62.564 72.222 10.83 0.00 39.42 3.18
5466 7017 4.886121 GCGCACGGGTAGGTAGCC 62.886 72.222 0.30 0.00 40.38 3.93
5474 7025 2.528041 GGGTAGGTAGCCGAATCAAG 57.472 55.000 0.00 0.00 33.75 3.02
5475 7026 1.540580 GGGTAGGTAGCCGAATCAAGC 60.541 57.143 0.00 0.00 33.75 4.01
5476 7027 1.540580 GGTAGGTAGCCGAATCAAGCC 60.541 57.143 0.00 0.00 0.00 4.35
5477 7028 0.756903 TAGGTAGCCGAATCAAGCCC 59.243 55.000 0.00 0.00 0.00 5.19
5478 7029 1.526225 GGTAGCCGAATCAAGCCCC 60.526 63.158 0.00 0.00 0.00 5.80
5479 7030 1.526225 GTAGCCGAATCAAGCCCCC 60.526 63.158 0.00 0.00 0.00 5.40
5493 7084 4.785453 CCCCGGCTGCTCCTGTTC 62.785 72.222 0.00 0.00 0.00 3.18
5522 7113 1.966451 CAAACCTTCCGCTTCCGCT 60.966 57.895 0.00 0.00 0.00 5.52
5523 7114 1.228154 AAACCTTCCGCTTCCGCTT 60.228 52.632 0.00 0.00 0.00 4.68
5588 9904 1.569653 CCCGGTCCTTTTCTACTCCT 58.430 55.000 0.00 0.00 0.00 3.69
5593 9909 2.767394 GGTCCTTTTCTACTCCTCTCCC 59.233 54.545 0.00 0.00 0.00 4.30
5594 9910 3.442076 GTCCTTTTCTACTCCTCTCCCA 58.558 50.000 0.00 0.00 0.00 4.37
5595 9911 3.449377 GTCCTTTTCTACTCCTCTCCCAG 59.551 52.174 0.00 0.00 0.00 4.45
5596 9912 3.336997 TCCTTTTCTACTCCTCTCCCAGA 59.663 47.826 0.00 0.00 0.00 3.86
5597 9913 4.097418 CCTTTTCTACTCCTCTCCCAGAA 58.903 47.826 0.00 0.00 0.00 3.02
5601 9917 1.007238 CTACTCCTCTCCCAGAACCCA 59.993 57.143 0.00 0.00 0.00 4.51
5602 9918 0.252467 ACTCCTCTCCCAGAACCCAG 60.252 60.000 0.00 0.00 0.00 4.45
5603 9919 0.041833 CTCCTCTCCCAGAACCCAGA 59.958 60.000 0.00 0.00 0.00 3.86
5650 9983 3.545481 GCACGATCGACCACGCAG 61.545 66.667 24.34 2.05 39.58 5.18
5651 9984 2.178273 CACGATCGACCACGCAGA 59.822 61.111 24.34 0.00 39.58 4.26
5652 9985 1.869574 CACGATCGACCACGCAGAG 60.870 63.158 24.34 0.00 39.58 3.35
5653 9986 2.333417 ACGATCGACCACGCAGAGT 61.333 57.895 24.34 0.00 39.58 3.24
5654 9987 1.583967 CGATCGACCACGCAGAGTC 60.584 63.158 10.26 0.00 39.58 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 5.957842 TTGACATTTAGGACATCCACAAC 57.042 39.130 0.00 0.00 38.89 3.32
109 110 6.660521 ACTGCATTTGAAATATCTTGGAGACA 59.339 34.615 4.39 0.00 39.83 3.41
124 125 2.156917 CTCTGCCTCAACTGCATTTGA 58.843 47.619 17.42 17.42 38.22 2.69
130 131 2.039405 CCAGCTCTGCCTCAACTGC 61.039 63.158 0.00 0.00 0.00 4.40
177 178 0.106669 GAAGGGAGGGGGCATACAAC 60.107 60.000 0.00 0.00 0.00 3.32
200 201 1.606903 ATCCGTCTCTACCACGATCC 58.393 55.000 0.00 0.00 39.75 3.36
201 202 3.363772 CGTAATCCGTCTCTACCACGATC 60.364 52.174 0.00 0.00 39.75 3.69
221 222 4.070552 GCTCGAGGGCTTCCACGT 62.071 66.667 15.58 0.00 43.51 4.49
285 286 3.330405 TCCATGATTTTCTCACTGGGTGA 59.670 43.478 0.00 0.43 40.50 4.02
287 288 4.387026 TTCCATGATTTTCTCACTGGGT 57.613 40.909 0.00 0.00 36.48 4.51
290 291 8.517878 ACATAGTTTTCCATGATTTTCTCACTG 58.482 33.333 0.00 0.00 36.48 3.66
291 292 8.641498 ACATAGTTTTCCATGATTTTCTCACT 57.359 30.769 0.00 0.00 36.48 3.41
360 362 1.464997 CTCGCAAAGCTTTACCAGACC 59.535 52.381 12.25 0.00 0.00 3.85
367 369 2.143122 CCACAGTCTCGCAAAGCTTTA 58.857 47.619 12.25 0.00 0.00 1.85
378 380 3.402628 TCTTGCTTAACCCACAGTCTC 57.597 47.619 0.00 0.00 0.00 3.36
379 381 3.857157 TTCTTGCTTAACCCACAGTCT 57.143 42.857 0.00 0.00 0.00 3.24
383 385 7.286775 AGAGTTAAAATTCTTGCTTAACCCACA 59.713 33.333 6.23 0.00 36.58 4.17
454 456 1.557371 TCATAGTGTCGGCAATTCCCA 59.443 47.619 0.00 0.00 0.00 4.37
464 1111 8.858003 AGTTACAATCATAGTTCATAGTGTCG 57.142 34.615 0.00 0.00 0.00 4.35
482 1129 8.537016 AGTATGTGGTTAGCAATAGAGTTACAA 58.463 33.333 0.00 0.00 0.00 2.41
494 1233 2.102420 CGGATGGAGTATGTGGTTAGCA 59.898 50.000 0.00 0.00 0.00 3.49
495 1234 2.102588 ACGGATGGAGTATGTGGTTAGC 59.897 50.000 0.00 0.00 0.00 3.09
496 1235 4.369182 GAACGGATGGAGTATGTGGTTAG 58.631 47.826 0.00 0.00 0.00 2.34
497 1236 3.133362 GGAACGGATGGAGTATGTGGTTA 59.867 47.826 0.00 0.00 0.00 2.85
498 1237 2.093128 GGAACGGATGGAGTATGTGGTT 60.093 50.000 0.00 0.00 0.00 3.67
499 1238 1.485066 GGAACGGATGGAGTATGTGGT 59.515 52.381 0.00 0.00 0.00 4.16
500 1239 1.484653 TGGAACGGATGGAGTATGTGG 59.515 52.381 0.00 0.00 0.00 4.17
501 1240 2.979814 TGGAACGGATGGAGTATGTG 57.020 50.000 0.00 0.00 0.00 3.21
502 1241 5.071788 ACAATATGGAACGGATGGAGTATGT 59.928 40.000 0.00 0.00 0.00 2.29
503 1242 5.551233 ACAATATGGAACGGATGGAGTATG 58.449 41.667 0.00 0.00 0.00 2.39
504 1243 5.825593 ACAATATGGAACGGATGGAGTAT 57.174 39.130 0.00 0.00 0.00 2.12
505 1244 6.551975 TCTTACAATATGGAACGGATGGAGTA 59.448 38.462 0.00 0.00 0.00 2.59
506 1245 5.365605 TCTTACAATATGGAACGGATGGAGT 59.634 40.000 0.00 0.00 0.00 3.85
507 1246 5.853936 TCTTACAATATGGAACGGATGGAG 58.146 41.667 0.00 0.00 0.00 3.86
508 1247 5.880164 TCTTACAATATGGAACGGATGGA 57.120 39.130 0.00 0.00 0.00 3.41
509 1248 5.997746 ACATCTTACAATATGGAACGGATGG 59.002 40.000 8.53 0.00 34.29 3.51
510 1249 7.496529 AACATCTTACAATATGGAACGGATG 57.503 36.000 0.00 0.00 35.57 3.51
511 1250 9.793259 AATAACATCTTACAATATGGAACGGAT 57.207 29.630 0.00 0.00 0.00 4.18
517 1256 9.701098 GGACGTAATAACATCTTACAATATGGA 57.299 33.333 0.00 0.00 0.00 3.41
518 1257 9.483916 TGGACGTAATAACATCTTACAATATGG 57.516 33.333 0.00 0.00 0.00 2.74
522 1261 9.391006 ACATTGGACGTAATAACATCTTACAAT 57.609 29.630 0.00 0.00 0.00 2.71
523 1262 8.780846 ACATTGGACGTAATAACATCTTACAA 57.219 30.769 0.00 0.00 0.00 2.41
524 1263 9.304731 GTACATTGGACGTAATAACATCTTACA 57.695 33.333 0.00 0.00 0.00 2.41
525 1264 9.525409 AGTACATTGGACGTAATAACATCTTAC 57.475 33.333 0.00 0.00 0.00 2.34
526 1265 9.740239 GAGTACATTGGACGTAATAACATCTTA 57.260 33.333 0.00 0.00 0.00 2.10
527 1266 8.255206 TGAGTACATTGGACGTAATAACATCTT 58.745 33.333 0.00 0.00 0.00 2.40
528 1267 7.705325 GTGAGTACATTGGACGTAATAACATCT 59.295 37.037 0.00 0.00 0.00 2.90
529 1268 7.490079 TGTGAGTACATTGGACGTAATAACATC 59.510 37.037 0.00 0.00 26.36 3.06
530 1269 7.324935 TGTGAGTACATTGGACGTAATAACAT 58.675 34.615 0.00 0.00 26.36 2.71
531 1270 6.689554 TGTGAGTACATTGGACGTAATAACA 58.310 36.000 0.00 0.00 28.33 2.41
532 1271 7.766219 ATGTGAGTACATTGGACGTAATAAC 57.234 36.000 0.00 0.00 45.01 1.89
535 1274 9.692749 CTAATATGTGAGTACATTGGACGTAAT 57.307 33.333 0.00 0.00 45.01 1.89
536 1275 8.905850 TCTAATATGTGAGTACATTGGACGTAA 58.094 33.333 0.00 0.00 45.01 3.18
537 1276 8.454570 TCTAATATGTGAGTACATTGGACGTA 57.545 34.615 0.00 0.00 45.01 3.57
538 1277 7.342769 TCTAATATGTGAGTACATTGGACGT 57.657 36.000 0.00 0.00 45.01 4.34
539 1278 9.343103 GTATCTAATATGTGAGTACATTGGACG 57.657 37.037 0.00 0.00 45.01 4.79
568 1307 9.550406 CCTTTGTCCCATAAATATAAGACGTTA 57.450 33.333 0.00 0.00 0.00 3.18
569 1308 7.501225 CCCTTTGTCCCATAAATATAAGACGTT 59.499 37.037 0.00 0.00 0.00 3.99
570 1309 6.996282 CCCTTTGTCCCATAAATATAAGACGT 59.004 38.462 0.00 0.00 0.00 4.34
571 1310 7.221450 TCCCTTTGTCCCATAAATATAAGACG 58.779 38.462 0.00 0.00 0.00 4.18
572 1311 7.175119 GCTCCCTTTGTCCCATAAATATAAGAC 59.825 40.741 0.00 0.00 0.00 3.01
573 1312 7.231467 GCTCCCTTTGTCCCATAAATATAAGA 58.769 38.462 0.00 0.00 0.00 2.10
574 1313 6.434340 GGCTCCCTTTGTCCCATAAATATAAG 59.566 42.308 0.00 0.00 0.00 1.73
575 1314 6.311735 GGCTCCCTTTGTCCCATAAATATAA 58.688 40.000 0.00 0.00 0.00 0.98
576 1315 5.222254 GGGCTCCCTTTGTCCCATAAATATA 60.222 44.000 0.00 0.00 38.62 0.86
577 1316 4.449229 GGGCTCCCTTTGTCCCATAAATAT 60.449 45.833 0.00 0.00 38.62 1.28
578 1317 3.117284 GGGCTCCCTTTGTCCCATAAATA 60.117 47.826 0.00 0.00 38.62 1.40
579 1318 2.359249 GGGCTCCCTTTGTCCCATAAAT 60.359 50.000 0.00 0.00 38.62 1.40
580 1319 1.006639 GGGCTCCCTTTGTCCCATAAA 59.993 52.381 0.00 0.00 38.62 1.40
581 1320 0.629058 GGGCTCCCTTTGTCCCATAA 59.371 55.000 0.00 0.00 38.62 1.90
582 1321 0.253630 AGGGCTCCCTTTGTCCCATA 60.254 55.000 0.54 0.00 45.70 2.74
583 1322 1.544917 AGGGCTCCCTTTGTCCCAT 60.545 57.895 0.54 0.00 45.70 4.00
584 1323 2.121506 AGGGCTCCCTTTGTCCCA 60.122 61.111 0.54 0.00 45.70 4.37
585 1324 2.356667 CAGGGCTCCCTTTGTCCC 59.643 66.667 4.34 0.00 45.70 4.46
586 1325 2.361737 GCAGGGCTCCCTTTGTCC 60.362 66.667 4.34 0.00 45.70 4.02
587 1326 0.827507 TTTGCAGGGCTCCCTTTGTC 60.828 55.000 4.34 0.00 45.70 3.18
588 1327 0.398381 TTTTGCAGGGCTCCCTTTGT 60.398 50.000 4.34 0.00 45.70 2.83
589 1328 0.758123 TTTTTGCAGGGCTCCCTTTG 59.242 50.000 4.34 0.00 45.70 2.77
590 1329 1.051008 CTTTTTGCAGGGCTCCCTTT 58.949 50.000 4.34 0.00 45.70 3.11
591 1330 0.188342 TCTTTTTGCAGGGCTCCCTT 59.812 50.000 4.34 0.00 45.70 3.95
593 1332 1.001293 CTTTCTTTTTGCAGGGCTCCC 59.999 52.381 0.00 0.00 0.00 4.30
594 1333 1.963515 TCTTTCTTTTTGCAGGGCTCC 59.036 47.619 0.00 0.00 0.00 4.70
595 1334 3.949842 ATCTTTCTTTTTGCAGGGCTC 57.050 42.857 0.00 0.00 0.00 4.70
596 1335 5.481473 TCAATATCTTTCTTTTTGCAGGGCT 59.519 36.000 0.00 0.00 0.00 5.19
597 1336 5.723295 TCAATATCTTTCTTTTTGCAGGGC 58.277 37.500 0.00 0.00 0.00 5.19
697 1854 4.867599 CCGGAGAAGGTACGCGCC 62.868 72.222 5.73 0.00 0.00 6.53
705 1862 1.519455 GACATCACGCCGGAGAAGG 60.519 63.158 13.83 3.69 0.00 3.46
727 1884 0.742281 CGGGACACTCTCATTGGCTG 60.742 60.000 0.00 0.00 0.00 4.85
747 1904 3.607370 GAGCCCCTGGTTCGGTGTC 62.607 68.421 0.00 0.00 0.00 3.67
788 1945 2.449345 ACTGTGGTTGTTTAGGGGGAAT 59.551 45.455 0.00 0.00 0.00 3.01
790 1947 1.525175 ACTGTGGTTGTTTAGGGGGA 58.475 50.000 0.00 0.00 0.00 4.81
835 1992 1.717194 GCGTTGGACTCCGATTACAA 58.283 50.000 0.00 0.00 0.00 2.41
839 1996 0.108329 ATTCGCGTTGGACTCCGATT 60.108 50.000 5.77 0.00 0.00 3.34
905 2062 2.017049 GGCGGTCTCTGCATTTTGTAT 58.983 47.619 3.03 0.00 0.00 2.29
1062 2226 4.500116 GCCGACAGGAGAGCGACC 62.500 72.222 0.00 0.00 41.02 4.79
1080 2244 2.057408 CGCTGGAAGGAGGAGAGCT 61.057 63.158 0.00 0.00 0.00 4.09
1260 2424 4.761058 TCGAGGGAGCCGAAGCCT 62.761 66.667 0.00 0.00 41.25 4.58
1312 2477 0.722676 ACTATCTGAGGGGGTTGGGA 59.277 55.000 0.00 0.00 0.00 4.37
1315 2480 2.752030 TCTGACTATCTGAGGGGGTTG 58.248 52.381 0.00 0.00 0.00 3.77
1337 2502 5.906113 ACAACTGATCGTAGAATCTGAGT 57.094 39.130 0.00 0.00 43.58 3.41
1338 2503 6.021074 CGAAACAACTGATCGTAGAATCTGAG 60.021 42.308 0.00 0.00 43.58 3.35
1339 2504 5.800438 CGAAACAACTGATCGTAGAATCTGA 59.200 40.000 0.00 0.00 43.58 3.27
1340 2505 5.800438 TCGAAACAACTGATCGTAGAATCTG 59.200 40.000 0.00 0.00 43.58 2.90
1341 2506 5.950883 TCGAAACAACTGATCGTAGAATCT 58.049 37.500 8.64 0.00 43.58 2.40
1342 2507 6.074782 GGATCGAAACAACTGATCGTAGAATC 60.075 42.308 0.00 5.63 43.58 2.52
1343 2508 5.749109 GGATCGAAACAACTGATCGTAGAAT 59.251 40.000 0.00 0.00 43.58 2.40
1344 2509 5.100259 GGATCGAAACAACTGATCGTAGAA 58.900 41.667 0.00 0.00 43.58 2.10
1355 2520 1.533731 TCCAAAGCGGATCGAAACAAC 59.466 47.619 0.00 0.00 39.64 3.32
1414 2579 0.317269 CGACAACCAGCAAGCAACAG 60.317 55.000 0.00 0.00 0.00 3.16
1500 2666 9.417561 ACTGTATTCTGTACTAGCCACTAATAA 57.582 33.333 0.00 0.00 0.00 1.40
1503 2669 7.013083 GCTACTGTATTCTGTACTAGCCACTAA 59.987 40.741 0.00 0.00 0.00 2.24
1504 2670 6.485984 GCTACTGTATTCTGTACTAGCCACTA 59.514 42.308 0.00 0.00 0.00 2.74
1505 2671 5.299782 GCTACTGTATTCTGTACTAGCCACT 59.700 44.000 0.00 0.00 0.00 4.00
1506 2672 5.299782 AGCTACTGTATTCTGTACTAGCCAC 59.700 44.000 0.00 0.00 30.35 5.01
1507 2673 5.446860 AGCTACTGTATTCTGTACTAGCCA 58.553 41.667 0.00 0.00 30.35 4.75
1508 2674 6.711645 ACTAGCTACTGTATTCTGTACTAGCC 59.288 42.308 16.19 0.00 35.84 3.93
1509 2675 7.733402 ACTAGCTACTGTATTCTGTACTAGC 57.267 40.000 16.19 8.80 35.84 3.42
1510 2676 9.206870 GGTACTAGCTACTGTATTCTGTACTAG 57.793 40.741 11.57 15.47 36.79 2.57
1511 2677 8.708378 TGGTACTAGCTACTGTATTCTGTACTA 58.292 37.037 11.57 5.54 0.00 1.82
1512 2678 7.571919 TGGTACTAGCTACTGTATTCTGTACT 58.428 38.462 11.57 0.00 0.00 2.73
1513 2679 7.798596 TGGTACTAGCTACTGTATTCTGTAC 57.201 40.000 0.00 0.00 0.00 2.90
1583 2749 6.206634 TGCAAGTTCCTACATCTTAAACCAAG 59.793 38.462 0.00 0.00 35.38 3.61
1627 2793 5.277828 CCAACCAGAGTTACAAGTTTACAGC 60.278 44.000 0.00 0.00 33.27 4.40
1642 2808 2.618709 GTGTCTCCAAAACCAACCAGAG 59.381 50.000 0.00 0.00 0.00 3.35
1690 2856 3.385111 TCACCAAAACCAACCACCAATAC 59.615 43.478 0.00 0.00 0.00 1.89
1773 2939 0.178533 GCTTGAGCAGCTCATCCTCT 59.821 55.000 25.94 0.00 46.27 3.69
1821 2987 3.368739 CCCAAAACATGAATCCTGAAGCC 60.369 47.826 0.00 0.00 0.00 4.35
1937 3103 7.177921 ACTTCAACAGCTAGGTATAGTGTACAA 59.822 37.037 0.00 0.00 0.00 2.41
1938 3104 6.662234 ACTTCAACAGCTAGGTATAGTGTACA 59.338 38.462 0.00 0.00 0.00 2.90
1939 3105 6.973474 CACTTCAACAGCTAGGTATAGTGTAC 59.027 42.308 0.00 0.00 0.00 2.90
1940 3106 6.096423 CCACTTCAACAGCTAGGTATAGTGTA 59.904 42.308 14.45 0.00 0.00 2.90
1941 3107 5.105310 CCACTTCAACAGCTAGGTATAGTGT 60.105 44.000 14.45 0.12 0.00 3.55
1942 3108 5.105310 ACCACTTCAACAGCTAGGTATAGTG 60.105 44.000 0.00 4.44 0.00 2.74
1954 3120 4.798387 GCTACAAACAAACCACTTCAACAG 59.202 41.667 0.00 0.00 0.00 3.16
1973 3139 3.070018 ACAAGCACACATCTGAAGCTAC 58.930 45.455 0.00 0.00 33.76 3.58
2003 3169 4.448732 TCGGAGCAAATGTGATGATAATCG 59.551 41.667 0.00 0.00 0.00 3.34
2066 3233 8.576442 CGGTCATTAAGGATATTAAGGCAAATT 58.424 33.333 0.00 0.00 0.00 1.82
2082 3249 0.035439 AGTGGTGGGCGGTCATTAAG 60.035 55.000 0.00 0.00 0.00 1.85
2092 3268 0.036765 TGAATACGTCAGTGGTGGGC 60.037 55.000 0.00 0.00 0.00 5.36
2159 3335 1.209504 TGCATTTAGGAACGGAGGGAG 59.790 52.381 0.00 0.00 0.00 4.30
2160 3336 1.281419 TGCATTTAGGAACGGAGGGA 58.719 50.000 0.00 0.00 0.00 4.20
2161 3337 2.017049 CTTGCATTTAGGAACGGAGGG 58.983 52.381 0.00 0.00 0.00 4.30
2162 3338 2.678336 GACTTGCATTTAGGAACGGAGG 59.322 50.000 0.00 0.00 0.00 4.30
2163 3339 3.600388 AGACTTGCATTTAGGAACGGAG 58.400 45.455 0.00 0.00 0.00 4.63
2164 3340 3.695830 AGACTTGCATTTAGGAACGGA 57.304 42.857 0.00 0.00 0.00 4.69
2165 3341 4.766404 AAAGACTTGCATTTAGGAACGG 57.234 40.909 0.00 0.00 0.00 4.44
2166 3342 7.581476 TCTAAAAAGACTTGCATTTAGGAACG 58.419 34.615 12.84 0.00 36.48 3.95
2167 3343 8.784043 TCTCTAAAAAGACTTGCATTTAGGAAC 58.216 33.333 12.84 0.00 36.48 3.62
2168 3344 8.918202 TCTCTAAAAAGACTTGCATTTAGGAA 57.082 30.769 12.84 2.63 36.48 3.36
2169 3345 9.520515 AATCTCTAAAAAGACTTGCATTTAGGA 57.479 29.630 12.84 10.16 36.48 2.94
2170 3346 9.780413 GAATCTCTAAAAAGACTTGCATTTAGG 57.220 33.333 12.84 6.46 36.48 2.69
2171 3347 9.780413 GGAATCTCTAAAAAGACTTGCATTTAG 57.220 33.333 8.35 8.35 36.93 1.85
2172 3348 9.295825 TGGAATCTCTAAAAAGACTTGCATTTA 57.704 29.630 0.00 0.00 0.00 1.40
2173 3349 8.084684 GTGGAATCTCTAAAAAGACTTGCATTT 58.915 33.333 0.00 0.00 0.00 2.32
2174 3350 7.449704 AGTGGAATCTCTAAAAAGACTTGCATT 59.550 33.333 0.00 0.00 0.00 3.56
2175 3351 6.944862 AGTGGAATCTCTAAAAAGACTTGCAT 59.055 34.615 0.00 0.00 0.00 3.96
2176 3352 6.299141 AGTGGAATCTCTAAAAAGACTTGCA 58.701 36.000 0.00 0.00 0.00 4.08
2177 3353 6.809630 AGTGGAATCTCTAAAAAGACTTGC 57.190 37.500 0.00 0.00 0.00 4.01
2178 3354 8.833231 TGTAGTGGAATCTCTAAAAAGACTTG 57.167 34.615 0.00 0.00 0.00 3.16
2179 3355 9.847224 TTTGTAGTGGAATCTCTAAAAAGACTT 57.153 29.630 0.00 0.00 28.58 3.01
2180 3356 9.274206 GTTTGTAGTGGAATCTCTAAAAAGACT 57.726 33.333 3.22 0.00 30.99 3.24
2181 3357 9.274206 AGTTTGTAGTGGAATCTCTAAAAAGAC 57.726 33.333 3.22 0.00 30.99 3.01
2188 3364 8.618677 CGTATGTAGTTTGTAGTGGAATCTCTA 58.381 37.037 0.00 0.00 0.00 2.43
2189 3365 7.416438 CCGTATGTAGTTTGTAGTGGAATCTCT 60.416 40.741 0.00 0.00 0.00 3.10
2190 3366 6.696148 CCGTATGTAGTTTGTAGTGGAATCTC 59.304 42.308 0.00 0.00 0.00 2.75
2191 3367 6.379133 TCCGTATGTAGTTTGTAGTGGAATCT 59.621 38.462 0.00 0.00 0.00 2.40
2192 3368 6.567050 TCCGTATGTAGTTTGTAGTGGAATC 58.433 40.000 0.00 0.00 0.00 2.52
2193 3369 6.534475 TCCGTATGTAGTTTGTAGTGGAAT 57.466 37.500 0.00 0.00 0.00 3.01
2194 3370 5.981088 TCCGTATGTAGTTTGTAGTGGAA 57.019 39.130 0.00 0.00 0.00 3.53
2195 3371 5.419788 ACATCCGTATGTAGTTTGTAGTGGA 59.580 40.000 0.00 0.00 44.66 4.02
2196 3372 5.657474 ACATCCGTATGTAGTTTGTAGTGG 58.343 41.667 0.00 0.00 44.66 4.00
2224 3400 8.976353 AGTGAATCTACACTCTGAAATATGTCT 58.024 33.333 0.00 0.00 46.36 3.41
2238 3414 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
2239 3415 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
2240 3416 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
2241 3417 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
2242 3418 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
2243 3419 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
2244 3420 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
2245 3421 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
2246 3422 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
2247 3423 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
2248 3424 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
2249 3425 4.508124 GGACTACATACGGAGCAAAATGAG 59.492 45.833 0.00 0.00 0.00 2.90
2250 3426 4.081365 TGGACTACATACGGAGCAAAATGA 60.081 41.667 0.00 0.00 0.00 2.57
2251 3427 4.188462 TGGACTACATACGGAGCAAAATG 58.812 43.478 0.00 0.00 0.00 2.32
2252 3428 4.481368 TGGACTACATACGGAGCAAAAT 57.519 40.909 0.00 0.00 0.00 1.82
2253 3429 3.965379 TGGACTACATACGGAGCAAAA 57.035 42.857 0.00 0.00 0.00 2.44
2254 3430 4.647853 ACTATGGACTACATACGGAGCAAA 59.352 41.667 0.00 0.00 41.03 3.68
2255 3431 4.037565 CACTATGGACTACATACGGAGCAA 59.962 45.833 0.00 0.00 41.03 3.91
2256 3432 3.568430 CACTATGGACTACATACGGAGCA 59.432 47.826 0.00 0.00 41.03 4.26
2257 3433 3.057456 CCACTATGGACTACATACGGAGC 60.057 52.174 0.00 0.00 40.96 4.70
2258 3434 4.395625 TCCACTATGGACTACATACGGAG 58.604 47.826 0.00 0.00 42.67 4.63
2259 3435 4.442401 TCCACTATGGACTACATACGGA 57.558 45.455 0.00 0.00 42.67 4.69
2270 3446 6.441924 AGTCTTTTCAGAGATTCCACTATGGA 59.558 38.462 0.00 0.00 46.61 3.41
2271 3447 6.648192 AGTCTTTTCAGAGATTCCACTATGG 58.352 40.000 0.00 0.00 39.43 2.74
2272 3448 9.829507 ATAAGTCTTTTCAGAGATTCCACTATG 57.170 33.333 0.00 0.00 0.00 2.23
2284 3460 9.595823 CCGTTCCTAAATATAAGTCTTTTCAGA 57.404 33.333 0.00 0.00 0.00 3.27
2285 3461 9.595823 TCCGTTCCTAAATATAAGTCTTTTCAG 57.404 33.333 0.00 0.00 0.00 3.02
2286 3462 9.595823 CTCCGTTCCTAAATATAAGTCTTTTCA 57.404 33.333 0.00 0.00 0.00 2.69
2287 3463 9.043079 CCTCCGTTCCTAAATATAAGTCTTTTC 57.957 37.037 0.00 0.00 0.00 2.29
2288 3464 7.991460 CCCTCCGTTCCTAAATATAAGTCTTTT 59.009 37.037 0.00 0.00 0.00 2.27
2289 3465 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
2290 3466 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
2291 3467 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
2292 3468 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
2293 3469 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
2294 3470 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
2296 3472 9.417561 CATATACTCCCTCCGTTCCTAAATATA 57.582 37.037 0.00 0.00 0.00 0.86
2297 3473 7.899709 ACATATACTCCCTCCGTTCCTAAATAT 59.100 37.037 0.00 0.00 0.00 1.28
2298 3474 7.243824 ACATATACTCCCTCCGTTCCTAAATA 58.756 38.462 0.00 0.00 0.00 1.40
2299 3475 6.082707 ACATATACTCCCTCCGTTCCTAAAT 58.917 40.000 0.00 0.00 0.00 1.40
2300 3476 5.461327 ACATATACTCCCTCCGTTCCTAAA 58.539 41.667 0.00 0.00 0.00 1.85
2301 3477 5.070823 ACATATACTCCCTCCGTTCCTAA 57.929 43.478 0.00 0.00 0.00 2.69
2302 3478 4.105217 TGACATATACTCCCTCCGTTCCTA 59.895 45.833 0.00 0.00 0.00 2.94
2303 3479 3.117246 TGACATATACTCCCTCCGTTCCT 60.117 47.826 0.00 0.00 0.00 3.36
2304 3480 3.228453 TGACATATACTCCCTCCGTTCC 58.772 50.000 0.00 0.00 0.00 3.62
2305 3481 4.931661 TTGACATATACTCCCTCCGTTC 57.068 45.455 0.00 0.00 0.00 3.95
2306 3482 4.899457 TGATTGACATATACTCCCTCCGTT 59.101 41.667 0.00 0.00 0.00 4.44
2307 3483 4.480115 TGATTGACATATACTCCCTCCGT 58.520 43.478 0.00 0.00 0.00 4.69
2308 3484 5.468540 TTGATTGACATATACTCCCTCCG 57.531 43.478 0.00 0.00 0.00 4.63
2309 3485 7.442666 GTCTTTTGATTGACATATACTCCCTCC 59.557 40.741 0.00 0.00 33.75 4.30
2310 3486 7.987458 TGTCTTTTGATTGACATATACTCCCTC 59.013 37.037 0.00 0.00 38.15 4.30
2311 3487 7.861629 TGTCTTTTGATTGACATATACTCCCT 58.138 34.615 0.00 0.00 38.15 4.20
2312 3488 8.506168 TTGTCTTTTGATTGACATATACTCCC 57.494 34.615 0.00 0.00 41.93 4.30
2372 3548 8.361139 GCCTCATCTAGTTAGCATAGTTTTCTA 58.639 37.037 0.00 0.00 36.78 2.10
2427 3607 3.041211 ACCAGCTGTCTGCCTAATCATA 58.959 45.455 13.81 0.00 44.23 2.15
2428 3608 1.842562 ACCAGCTGTCTGCCTAATCAT 59.157 47.619 13.81 0.00 44.23 2.45
2429 3609 1.279496 ACCAGCTGTCTGCCTAATCA 58.721 50.000 13.81 0.00 44.23 2.57
2519 3699 8.477419 TTTCCATCAAGTCCTGTAAGAAAATT 57.523 30.769 0.00 0.00 34.07 1.82
2706 3886 7.179338 AGTGAGATACTCCCATATTGATGTACC 59.821 40.741 0.00 0.00 33.17 3.34
2734 3922 5.769662 AGATAACTCTGGTTGATTTGCACAA 59.230 36.000 0.00 0.00 36.92 3.33
2965 4170 9.734984 ACAACTATAAGCCTTTGTTGTATACTT 57.265 29.630 16.22 0.00 45.96 2.24
3011 4236 6.959361 TGAGCAAGATACAGTTTCAGAAAAC 58.041 36.000 0.00 0.00 44.24 2.43
3038 4263 3.476552 TGTCAAGGTCTGGTCACAAATC 58.523 45.455 0.00 0.00 0.00 2.17
3079 4304 9.720667 TTTGCATTATTAAGATCTTGAATCACG 57.279 29.630 18.47 2.64 0.00 4.35
3154 4379 3.055167 GGCTTTGGACAAGGGCATTATTT 60.055 43.478 14.33 0.00 41.52 1.40
3186 4411 2.677836 GCTCCTTTGTGTGCGATCAATA 59.322 45.455 0.00 0.00 0.00 1.90
3190 4415 1.089920 ATGCTCCTTTGTGTGCGATC 58.910 50.000 0.00 0.00 0.00 3.69
3196 4421 5.534207 TGAATCAAAATGCTCCTTTGTGT 57.466 34.783 5.89 0.00 35.65 3.72
3220 4446 4.867047 ACTCTGCAGAAACAAGATACATCG 59.133 41.667 18.85 3.08 0.00 3.84
3388 4656 6.837471 AGAATAGAAGAAACCACTACGAGT 57.163 37.500 0.00 0.00 0.00 4.18
3394 4662 8.980481 TTGAGAAAAGAATAGAAGAAACCACT 57.020 30.769 0.00 0.00 0.00 4.00
3397 4665 9.670719 CAGTTTGAGAAAAGAATAGAAGAAACC 57.329 33.333 0.00 0.00 0.00 3.27
3412 4680 4.883585 ACAGCTGACAATCAGTTTGAGAAA 59.116 37.500 23.35 0.00 45.94 2.52
3415 4683 3.608707 GCACAGCTGACAATCAGTTTGAG 60.609 47.826 23.35 10.38 45.94 3.02
3457 4725 3.513515 GGGGGAAACATACAAGCAAATCA 59.486 43.478 0.00 0.00 0.00 2.57
3463 4731 3.096092 TCAATGGGGGAAACATACAAGC 58.904 45.455 0.00 0.00 0.00 4.01
3475 4743 1.077212 CTCCTGTGCTCAATGGGGG 60.077 63.158 0.00 0.00 0.00 5.40
3538 4939 2.148768 ACAGTCAGCACATGTGACATG 58.851 47.619 29.80 22.97 45.76 3.21
3539 4940 2.556144 ACAGTCAGCACATGTGACAT 57.444 45.000 29.80 11.25 45.76 3.06
3540 4941 2.330440 AACAGTCAGCACATGTGACA 57.670 45.000 29.80 8.83 45.76 3.58
3541 4942 2.874701 AGAAACAGTCAGCACATGTGAC 59.125 45.455 29.80 18.01 44.02 3.67
3542 4943 3.198409 AGAAACAGTCAGCACATGTGA 57.802 42.857 29.80 5.76 0.00 3.58
3543 4944 3.976793 AAGAAACAGTCAGCACATGTG 57.023 42.857 21.83 21.83 0.00 3.21
3544 4945 3.002656 CGAAAGAAACAGTCAGCACATGT 59.997 43.478 0.00 0.00 0.00 3.21
3545 4946 3.002656 ACGAAAGAAACAGTCAGCACATG 59.997 43.478 0.00 0.00 0.00 3.21
3566 4967 4.843728 TCCATAACCAAGAATCTGACCAC 58.156 43.478 0.00 0.00 0.00 4.16
3681 5082 3.010027 TGAATGCCTCCTGACCATTTACA 59.990 43.478 0.00 0.00 29.96 2.41
3708 5109 3.652274 CAACATTGCGTTCCCATTTTCT 58.348 40.909 0.00 0.00 34.86 2.52
3740 5141 4.457257 GCTTGTATTCCCAAGATAGGATGC 59.543 45.833 5.17 0.00 43.65 3.91
3765 5166 2.423577 GTCACAGCTGAACCGGTTATT 58.576 47.619 22.33 0.00 0.00 1.40
3826 5229 2.542020 TCTGAAGCCGAACATCAACA 57.458 45.000 0.00 0.00 0.00 3.33
3853 5256 8.154856 TCTGCTAGGTCAGTTATTAAAAACACT 58.845 33.333 0.00 0.00 35.63 3.55
3911 5314 6.691388 AGAAAAACACGTTCACTTAAGAATGC 59.309 34.615 10.09 0.00 37.91 3.56
3996 5399 4.212214 GCTACAAAACTGAAGGAGACACTG 59.788 45.833 0.00 0.00 0.00 3.66
4031 5438 6.480320 GCAGACTATGAACTGGTAACCAATAG 59.520 42.308 0.00 0.00 35.05 1.73
4032 5439 6.156256 AGCAGACTATGAACTGGTAACCAATA 59.844 38.462 0.00 0.00 41.89 1.90
4094 5501 4.061357 CATATTCATGCACCAAATGGCA 57.939 40.909 0.00 0.00 45.23 4.92
4167 5574 6.309712 GCTGAGAGCATAAATAGCATTGAA 57.690 37.500 0.00 0.00 41.89 2.69
4193 5600 5.673337 TCTACAACATTCTTGTCAAGTGC 57.327 39.130 12.30 0.00 34.06 4.40
4199 5606 5.689383 TGCCTTTCTACAACATTCTTGTC 57.311 39.130 0.00 0.00 34.06 3.18
4200 5607 5.594317 ACTTGCCTTTCTACAACATTCTTGT 59.406 36.000 0.00 0.00 37.82 3.16
4209 5616 6.877322 GTGTAGGAATACTTGCCTTTCTACAA 59.123 38.462 5.28 0.00 35.73 2.41
4211 5618 5.816258 GGTGTAGGAATACTTGCCTTTCTAC 59.184 44.000 0.00 0.00 35.73 2.59
4218 5625 3.055385 TGACAGGTGTAGGAATACTTGCC 60.055 47.826 0.00 0.00 28.38 4.52
4228 5635 3.981071 TCATTCCTTGACAGGTGTAGG 57.019 47.619 0.00 0.00 41.69 3.18
4233 5640 4.755123 CGTTACTTTCATTCCTTGACAGGT 59.245 41.667 0.00 0.00 41.69 4.00
4248 5655 5.233689 GTCAAGTGCACTTAGTCGTTACTTT 59.766 40.000 30.67 2.08 37.15 2.66
4259 5666 4.319190 CGGAAATTTCGTCAAGTGCACTTA 60.319 41.667 30.67 15.46 34.28 2.24
4260 5667 3.548014 CGGAAATTTCGTCAAGTGCACTT 60.548 43.478 26.36 26.36 36.45 3.16
4261 5668 2.032030 CGGAAATTTCGTCAAGTGCACT 60.032 45.455 15.25 15.25 0.00 4.40
4262 5669 2.032377 TCGGAAATTTCGTCAAGTGCAC 60.032 45.455 9.40 9.40 0.00 4.57
4263 5670 2.214347 TCGGAAATTTCGTCAAGTGCA 58.786 42.857 11.95 0.00 0.00 4.57
4264 5671 2.961522 TCGGAAATTTCGTCAAGTGC 57.038 45.000 11.95 0.00 0.00 4.40
4265 5672 3.603770 GCATTCGGAAATTTCGTCAAGTG 59.396 43.478 11.95 7.18 0.00 3.16
4266 5673 3.365969 GGCATTCGGAAATTTCGTCAAGT 60.366 43.478 11.95 0.00 0.00 3.16
4267 5674 3.171277 GGCATTCGGAAATTTCGTCAAG 58.829 45.455 11.95 3.61 0.00 3.02
4268 5675 2.554462 TGGCATTCGGAAATTTCGTCAA 59.446 40.909 11.95 5.05 0.00 3.18
4270 5677 2.911819 TGGCATTCGGAAATTTCGTC 57.088 45.000 11.95 0.24 0.00 4.20
4271 5678 2.752354 TGATGGCATTCGGAAATTTCGT 59.248 40.909 11.95 0.00 0.00 3.85
4313 5724 2.631160 AACCAATGTCAGTCCGAACA 57.369 45.000 0.00 0.00 0.00 3.18
4338 5749 0.835941 AATGGCCAACAAAACCTGCA 59.164 45.000 10.96 0.00 0.00 4.41
4390 5801 1.354337 CGCATGACTCCAAGTCCGTG 61.354 60.000 0.00 5.26 44.44 4.94
4542 5953 8.984764 CAAGGCTTGTAAAAACTTAATTTACCC 58.015 33.333 19.07 3.33 40.75 3.69
4574 5985 9.586435 CACATAGACTCACAACTGTCAATATAA 57.414 33.333 0.00 0.00 35.81 0.98
4575 5986 8.966868 TCACATAGACTCACAACTGTCAATATA 58.033 33.333 0.00 0.00 35.81 0.86
4576 5987 7.840931 TCACATAGACTCACAACTGTCAATAT 58.159 34.615 0.00 0.00 35.81 1.28
4592 6005 4.557695 CGAGTTAGCCAGGATCACATAGAC 60.558 50.000 0.00 0.00 0.00 2.59
4679 6094 0.678048 GATCGGAAAAGCCTGCCAGT 60.678 55.000 0.00 0.00 0.00 4.00
4680 6095 1.379642 GGATCGGAAAAGCCTGCCAG 61.380 60.000 0.00 0.00 0.00 4.85
4681 6096 1.378514 GGATCGGAAAAGCCTGCCA 60.379 57.895 0.00 0.00 0.00 4.92
4689 6104 4.394920 GCACTAATTCACTGGATCGGAAAA 59.605 41.667 0.00 0.00 0.00 2.29
4748 6163 0.603707 CGGCAGCCAGACTCTTTTGA 60.604 55.000 13.30 0.00 0.00 2.69
4799 6216 5.551233 CATCGAATCCCACACCACTATAAT 58.449 41.667 0.00 0.00 0.00 1.28
4812 6229 2.069273 CCTATCGTTGCATCGAATCCC 58.931 52.381 22.45 0.00 42.99 3.85
4895 6316 0.771127 TCCCAAGAAACACAGGGGAG 59.229 55.000 0.00 0.00 42.75 4.30
4925 6347 8.745837 CATTTTTGCACTTCTACAACAGTAAAG 58.254 33.333 0.00 0.00 0.00 1.85
4928 6350 7.282224 AGACATTTTTGCACTTCTACAACAGTA 59.718 33.333 0.00 0.00 0.00 2.74
4929 6351 6.095440 AGACATTTTTGCACTTCTACAACAGT 59.905 34.615 0.00 0.00 0.00 3.55
4935 6385 5.748592 ACGAAGACATTTTTGCACTTCTAC 58.251 37.500 8.72 0.00 36.04 2.59
4968 6420 9.515020 GTACGAGCTACTACTACCTATATGTAG 57.485 40.741 12.19 12.19 43.13 2.74
4969 6421 9.025041 TGTACGAGCTACTACTACCTATATGTA 57.975 37.037 0.00 0.00 0.00 2.29
4971 6423 8.768957 TTGTACGAGCTACTACTACCTATATG 57.231 38.462 0.00 0.00 0.00 1.78
4975 6427 5.994054 CCATTGTACGAGCTACTACTACCTA 59.006 44.000 0.00 0.00 0.00 3.08
4976 6428 4.820716 CCATTGTACGAGCTACTACTACCT 59.179 45.833 0.00 0.00 0.00 3.08
4977 6429 4.023365 CCCATTGTACGAGCTACTACTACC 60.023 50.000 0.00 0.00 0.00 3.18
4978 6430 4.578105 ACCCATTGTACGAGCTACTACTAC 59.422 45.833 0.00 0.00 0.00 2.73
4979 6431 4.785301 ACCCATTGTACGAGCTACTACTA 58.215 43.478 0.00 0.00 0.00 1.82
4980 6432 3.629087 ACCCATTGTACGAGCTACTACT 58.371 45.455 0.00 0.00 0.00 2.57
4985 6437 5.887598 TCTACTAAACCCATTGTACGAGCTA 59.112 40.000 0.00 0.00 0.00 3.32
5007 6459 2.294233 GCACATGACAATGGTGTGTTCT 59.706 45.455 0.00 0.00 43.80 3.01
5058 6513 9.692749 CAAGTCTACTGTCATAAGTAGTTCAAA 57.307 33.333 10.33 0.00 46.53 2.69
5067 6522 4.744795 AGGCCAAGTCTACTGTCATAAG 57.255 45.455 5.01 0.00 0.00 1.73
5098 6585 2.172293 ACCCAACAAAACGTACCCACTA 59.828 45.455 0.00 0.00 0.00 2.74
5224 6759 5.689383 ATAGCCGCAATTTTGGTAGTATG 57.311 39.130 0.00 0.00 0.00 2.39
5275 6811 3.108289 CACGTGCTCCGCTGACTG 61.108 66.667 0.82 0.00 41.42 3.51
5342 6893 4.988716 TCACGGCGGAGGACCACT 62.989 66.667 13.24 0.00 35.59 4.00
5392 6943 4.742649 AGCGTGAGAGGCCCGAGA 62.743 66.667 0.00 0.00 0.00 4.04
5416 6967 3.465871 ACTACTACTGCTACTACCGCTC 58.534 50.000 0.00 0.00 0.00 5.03
5458 7009 0.756903 GGGCTTGATTCGGCTACCTA 59.243 55.000 2.38 0.00 0.00 3.08
5459 7010 1.527370 GGGCTTGATTCGGCTACCT 59.473 57.895 2.38 0.00 0.00 3.08
5461 7012 1.526225 GGGGGCTTGATTCGGCTAC 60.526 63.158 2.38 0.00 0.00 3.58
5462 7013 2.915869 GGGGGCTTGATTCGGCTA 59.084 61.111 2.38 0.00 0.00 3.93
5463 7014 4.489771 CGGGGGCTTGATTCGGCT 62.490 66.667 2.38 0.00 0.00 5.52
5476 7027 4.785453 GAACAGGAGCAGCCGGGG 62.785 72.222 2.18 0.00 43.43 5.73
5477 7028 3.672295 GAGAACAGGAGCAGCCGGG 62.672 68.421 2.18 0.00 43.43 5.73
5478 7029 2.125350 GAGAACAGGAGCAGCCGG 60.125 66.667 0.00 0.00 43.43 6.13
5479 7030 2.507992 CGAGAACAGGAGCAGCCG 60.508 66.667 0.00 0.00 43.43 5.52
5493 7084 2.458006 GAAGGTTTGGTTGCGGCGAG 62.458 60.000 12.98 0.00 0.00 5.03
5588 9904 0.252284 GAGGTCTGGGTTCTGGGAGA 60.252 60.000 0.00 0.00 0.00 3.71
5593 9909 0.610687 GGTCAGAGGTCTGGGTTCTG 59.389 60.000 7.14 0.00 43.91 3.02
5594 9910 0.489567 AGGTCAGAGGTCTGGGTTCT 59.510 55.000 7.14 0.00 43.91 3.01
5595 9911 0.899019 GAGGTCAGAGGTCTGGGTTC 59.101 60.000 7.14 0.00 43.91 3.62
5596 9912 0.489567 AGAGGTCAGAGGTCTGGGTT 59.510 55.000 7.14 0.00 43.91 4.11
5597 9913 0.040499 GAGAGGTCAGAGGTCTGGGT 59.960 60.000 7.14 0.00 43.91 4.51
5601 9917 1.700985 GGGGAGAGGTCAGAGGTCT 59.299 63.158 0.00 0.00 0.00 3.85
5602 9918 1.382009 GGGGGAGAGGTCAGAGGTC 60.382 68.421 0.00 0.00 0.00 3.85
5603 9919 2.781406 GGGGGAGAGGTCAGAGGT 59.219 66.667 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.