Multiple sequence alignment - TraesCS5D01G302300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G302300 chr5D 100.000 2618 0 0 1 2618 398546867 398549484 0.000000e+00 4835.0
1 TraesCS5D01G302300 chr5D 90.058 342 31 3 24 364 257808678 257808339 8.600000e-120 440.0
2 TraesCS5D01G302300 chr5D 73.036 560 109 31 1072 1619 398255301 398255830 2.700000e-35 159.0
3 TraesCS5D01G302300 chr5D 86.765 136 18 0 1072 1207 398124882 398125017 4.510000e-33 152.0
4 TraesCS5D01G302300 chr5B 89.085 1530 95 30 417 1922 478514126 478515607 0.000000e+00 1834.0
5 TraesCS5D01G302300 chr5B 87.092 705 76 12 1908 2602 478515675 478516374 0.000000e+00 784.0
6 TraesCS5D01G302300 chr5B 100.000 34 0 0 1076 1109 478336083 478336116 2.180000e-06 63.9
7 TraesCS5D01G302300 chr5A 92.238 1211 69 11 434 1627 503622387 503623589 0.000000e+00 1692.0
8 TraesCS5D01G302300 chr5A 82.867 572 64 9 2042 2605 503623927 503624472 1.410000e-132 483.0
9 TraesCS5D01G302300 chr5A 89.105 257 21 4 1628 1883 503623676 503623926 1.960000e-81 313.0
10 TraesCS5D01G302300 chr5A 74.113 564 105 28 1072 1619 503233496 503234034 7.390000e-46 195.0
11 TraesCS5D01G302300 chr5A 88.971 136 15 0 1072 1207 503320288 503320423 4.480000e-38 169.0
12 TraesCS5D01G302300 chr5A 83.088 136 18 3 1076 1207 503493049 503493183 4.580000e-23 119.0
13 TraesCS5D01G302300 chr7D 91.429 350 25 5 17 364 379638056 379637710 2.360000e-130 475.0
14 TraesCS5D01G302300 chr7D 90.000 350 31 4 17 364 364365960 364366307 1.430000e-122 449.0
15 TraesCS5D01G302300 chr7D 89.489 352 31 5 15 364 265267432 265267085 8.600000e-120 440.0
16 TraesCS5D01G302300 chr7D 89.429 350 33 4 17 365 593398496 593398842 3.090000e-119 438.0
17 TraesCS5D01G302300 chr6A 89.807 363 26 11 16 371 317510170 317509812 3.070000e-124 455.0
18 TraesCS5D01G302300 chr6A 89.744 351 32 4 17 365 335117025 335117373 1.850000e-121 446.0
19 TraesCS5D01G302300 chr4B 89.076 357 35 4 17 372 565834904 565835257 8.600000e-120 440.0
20 TraesCS5D01G302300 chr7A 89.459 351 31 6 15 364 290291537 290291192 3.090000e-119 438.0
21 TraesCS5D01G302300 chr3A 92.593 54 3 1 363 415 624562379 624562326 2.790000e-10 76.8
22 TraesCS5D01G302300 chr1B 92.593 54 3 1 363 415 340459313 340459260 2.790000e-10 76.8
23 TraesCS5D01G302300 chr1A 92.593 54 3 1 363 415 312722507 312722454 2.790000e-10 76.8
24 TraesCS5D01G302300 chr1A 90.741 54 4 1 363 415 20083807 20083860 1.300000e-08 71.3
25 TraesCS5D01G302300 chr2B 88.889 54 5 1 363 415 476415169 476415116 6.050000e-07 65.8
26 TraesCS5D01G302300 chr4D 100.000 31 0 0 363 393 35481097 35481127 1.010000e-04 58.4
27 TraesCS5D01G302300 chr3B 76.577 111 22 2 2470 2577 618439648 618439539 1.010000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G302300 chr5D 398546867 398549484 2617 False 4835.000000 4835 100.0000 1 2618 1 chr5D.!!$F3 2617
1 TraesCS5D01G302300 chr5B 478514126 478516374 2248 False 1309.000000 1834 88.0885 417 2602 2 chr5B.!!$F2 2185
2 TraesCS5D01G302300 chr5A 503622387 503624472 2085 False 829.333333 1692 88.0700 434 2605 3 chr5A.!!$F4 2171

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
577 591 0.098728 CCAATTTGCTCGCTAACGGG 59.901 55.0 0.0 0.0 44.94 5.28 F
773 800 0.515564 ACGCCGAATTGTTTTCTCCG 59.484 50.0 0.0 0.0 0.00 4.63 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1520 1562 0.321387 GAACTCCAAACCCTCGACCC 60.321 60.0 0.00 0.00 0.00 4.46 R
2476 2692 0.820871 CTGGCACCCAGTCTCTAGAC 59.179 60.0 1.72 1.72 45.82 2.59 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.426842 AAAGGCTTGCCTCATACTCC 57.573 50.000 15.10 0.00 0.00 3.85
22 23 0.548510 AAGGCTTGCCTCATACTCCC 59.451 55.000 15.10 0.00 0.00 4.30
23 24 0.327000 AGGCTTGCCTCATACTCCCT 60.327 55.000 8.56 0.00 0.00 4.20
24 25 0.107643 GGCTTGCCTCATACTCCCTC 59.892 60.000 4.11 0.00 0.00 4.30
25 26 0.107643 GCTTGCCTCATACTCCCTCC 59.892 60.000 0.00 0.00 0.00 4.30
26 27 1.799933 CTTGCCTCATACTCCCTCCT 58.200 55.000 0.00 0.00 0.00 3.69
27 28 2.122768 CTTGCCTCATACTCCCTCCTT 58.877 52.381 0.00 0.00 0.00 3.36
28 29 2.270434 TGCCTCATACTCCCTCCTTT 57.730 50.000 0.00 0.00 0.00 3.11
29 30 2.119495 TGCCTCATACTCCCTCCTTTC 58.881 52.381 0.00 0.00 0.00 2.62
30 31 2.293184 TGCCTCATACTCCCTCCTTTCT 60.293 50.000 0.00 0.00 0.00 2.52
31 32 2.103941 GCCTCATACTCCCTCCTTTCTG 59.896 54.545 0.00 0.00 0.00 3.02
32 33 2.703007 CCTCATACTCCCTCCTTTCTGG 59.297 54.545 0.00 0.00 37.10 3.86
33 34 3.379452 CTCATACTCCCTCCTTTCTGGT 58.621 50.000 0.00 0.00 37.07 4.00
34 35 3.777522 CTCATACTCCCTCCTTTCTGGTT 59.222 47.826 0.00 0.00 37.07 3.67
35 36 4.175962 TCATACTCCCTCCTTTCTGGTTT 58.824 43.478 0.00 0.00 37.07 3.27
36 37 5.347124 TCATACTCCCTCCTTTCTGGTTTA 58.653 41.667 0.00 0.00 37.07 2.01
37 38 5.970640 TCATACTCCCTCCTTTCTGGTTTAT 59.029 40.000 0.00 0.00 37.07 1.40
38 39 7.136885 TCATACTCCCTCCTTTCTGGTTTATA 58.863 38.462 0.00 0.00 37.07 0.98
39 40 5.959583 ACTCCCTCCTTTCTGGTTTATAG 57.040 43.478 0.00 0.00 37.07 1.31
40 41 4.722279 ACTCCCTCCTTTCTGGTTTATAGG 59.278 45.833 0.00 0.00 37.07 2.57
41 42 3.458487 TCCCTCCTTTCTGGTTTATAGGC 59.542 47.826 0.00 0.00 37.07 3.93
42 43 3.459969 CCCTCCTTTCTGGTTTATAGGCT 59.540 47.826 0.00 0.00 37.07 4.58
43 44 4.445019 CCCTCCTTTCTGGTTTATAGGCTC 60.445 50.000 0.00 0.00 37.07 4.70
44 45 4.164221 CCTCCTTTCTGGTTTATAGGCTCA 59.836 45.833 0.00 0.00 37.07 4.26
45 46 5.163152 CCTCCTTTCTGGTTTATAGGCTCAT 60.163 44.000 0.00 0.00 37.07 2.90
46 47 5.684704 TCCTTTCTGGTTTATAGGCTCATG 58.315 41.667 0.00 0.00 37.07 3.07
47 48 5.191722 TCCTTTCTGGTTTATAGGCTCATGT 59.808 40.000 0.00 0.00 37.07 3.21
48 49 5.529060 CCTTTCTGGTTTATAGGCTCATGTC 59.471 44.000 0.00 0.00 0.00 3.06
49 50 5.692115 TTCTGGTTTATAGGCTCATGTCA 57.308 39.130 0.00 0.00 0.00 3.58
50 51 5.692115 TCTGGTTTATAGGCTCATGTCAA 57.308 39.130 0.00 0.00 0.00 3.18
51 52 6.061022 TCTGGTTTATAGGCTCATGTCAAA 57.939 37.500 0.00 0.00 0.00 2.69
52 53 6.480763 TCTGGTTTATAGGCTCATGTCAAAA 58.519 36.000 0.00 0.00 0.00 2.44
53 54 6.599244 TCTGGTTTATAGGCTCATGTCAAAAG 59.401 38.462 0.00 0.00 0.00 2.27
54 55 5.652014 TGGTTTATAGGCTCATGTCAAAAGG 59.348 40.000 0.00 0.00 0.00 3.11
55 56 5.652452 GGTTTATAGGCTCATGTCAAAAGGT 59.348 40.000 0.00 0.00 0.00 3.50
56 57 6.152831 GGTTTATAGGCTCATGTCAAAAGGTT 59.847 38.462 0.00 0.00 0.00 3.50
57 58 7.309805 GGTTTATAGGCTCATGTCAAAAGGTTT 60.310 37.037 0.00 0.00 0.00 3.27
58 59 5.649782 ATAGGCTCATGTCAAAAGGTTTG 57.350 39.130 0.00 0.00 0.00 2.93
59 60 3.299503 AGGCTCATGTCAAAAGGTTTGT 58.700 40.909 0.00 0.00 0.00 2.83
60 61 3.706086 AGGCTCATGTCAAAAGGTTTGTT 59.294 39.130 0.00 0.00 0.00 2.83
61 62 4.162131 AGGCTCATGTCAAAAGGTTTGTTT 59.838 37.500 0.00 0.00 0.00 2.83
62 63 4.875536 GGCTCATGTCAAAAGGTTTGTTTT 59.124 37.500 0.00 0.00 0.00 2.43
63 64 5.006649 GGCTCATGTCAAAAGGTTTGTTTTC 59.993 40.000 0.00 0.00 0.00 2.29
64 65 5.006649 GCTCATGTCAAAAGGTTTGTTTTCC 59.993 40.000 0.00 0.00 0.00 3.13
65 66 6.293004 TCATGTCAAAAGGTTTGTTTTCCT 57.707 33.333 0.00 0.00 35.34 3.36
66 67 6.105333 TCATGTCAAAAGGTTTGTTTTCCTG 58.895 36.000 0.00 0.00 33.97 3.86
67 68 5.476091 TGTCAAAAGGTTTGTTTTCCTGT 57.524 34.783 0.98 0.00 33.97 4.00
68 69 5.859495 TGTCAAAAGGTTTGTTTTCCTGTT 58.141 33.333 0.98 0.00 33.97 3.16
69 70 6.292150 TGTCAAAAGGTTTGTTTTCCTGTTT 58.708 32.000 0.98 0.00 33.97 2.83
70 71 6.768381 TGTCAAAAGGTTTGTTTTCCTGTTTT 59.232 30.769 0.98 0.00 33.97 2.43
71 72 7.931948 TGTCAAAAGGTTTGTTTTCCTGTTTTA 59.068 29.630 0.98 0.00 33.97 1.52
72 73 8.941977 GTCAAAAGGTTTGTTTTCCTGTTTTAT 58.058 29.630 0.98 0.00 33.97 1.40
77 78 9.811995 AAGGTTTGTTTTCCTGTTTTATAAGTC 57.188 29.630 0.00 0.00 33.97 3.01
78 79 9.197306 AGGTTTGTTTTCCTGTTTTATAAGTCT 57.803 29.630 0.00 0.00 32.29 3.24
79 80 9.459640 GGTTTGTTTTCCTGTTTTATAAGTCTC 57.540 33.333 0.00 0.00 0.00 3.36
110 111 8.712228 ATACTACTTACCATCACATGATCAGA 57.288 34.615 0.00 0.00 31.21 3.27
111 112 7.609097 ACTACTTACCATCACATGATCAGAT 57.391 36.000 0.00 0.00 31.21 2.90
112 113 8.027524 ACTACTTACCATCACATGATCAGATT 57.972 34.615 0.00 0.00 31.21 2.40
113 114 8.489489 ACTACTTACCATCACATGATCAGATTT 58.511 33.333 0.00 0.00 31.21 2.17
114 115 9.334947 CTACTTACCATCACATGATCAGATTTT 57.665 33.333 0.00 0.00 31.21 1.82
116 117 9.857656 ACTTACCATCACATGATCAGATTTTAT 57.142 29.630 0.00 0.00 31.21 1.40
118 119 7.520451 ACCATCACATGATCAGATTTTATGG 57.480 36.000 16.79 16.79 36.93 2.74
119 120 7.064866 ACCATCACATGATCAGATTTTATGGT 58.935 34.615 17.69 17.69 38.76 3.55
120 121 7.013942 ACCATCACATGATCAGATTTTATGGTG 59.986 37.037 20.56 9.92 41.25 4.17
121 122 7.013942 CCATCACATGATCAGATTTTATGGTGT 59.986 37.037 0.00 0.00 31.21 4.16
122 123 9.059260 CATCACATGATCAGATTTTATGGTGTA 57.941 33.333 0.00 0.00 31.21 2.90
123 124 9.803507 ATCACATGATCAGATTTTATGGTGTAT 57.196 29.630 0.00 0.00 0.00 2.29
124 125 9.631257 TCACATGATCAGATTTTATGGTGTATT 57.369 29.630 0.00 0.00 0.00 1.89
137 138 9.800433 TTTTATGGTGTATTAAATCACTGCATG 57.200 29.630 11.33 0.00 35.26 4.06
138 139 5.247507 TGGTGTATTAAATCACTGCATGC 57.752 39.130 11.82 11.82 35.26 4.06
139 140 4.704057 TGGTGTATTAAATCACTGCATGCA 59.296 37.500 21.29 21.29 35.26 3.96
140 141 5.184671 TGGTGTATTAAATCACTGCATGCAA 59.815 36.000 22.88 7.52 35.26 4.08
141 142 5.745294 GGTGTATTAAATCACTGCATGCAAG 59.255 40.000 22.88 16.98 35.26 4.01
142 143 5.745294 GTGTATTAAATCACTGCATGCAAGG 59.255 40.000 22.88 16.29 0.00 3.61
143 144 5.651576 TGTATTAAATCACTGCATGCAAGGA 59.348 36.000 22.88 20.98 0.00 3.36
144 145 5.864418 ATTAAATCACTGCATGCAAGGAT 57.136 34.783 22.88 22.20 0.00 3.24
145 146 3.520290 AAATCACTGCATGCAAGGATG 57.480 42.857 25.76 19.29 0.00 3.51
146 147 2.430248 ATCACTGCATGCAAGGATGA 57.570 45.000 24.92 22.31 0.00 2.92
147 148 2.203470 TCACTGCATGCAAGGATGAA 57.797 45.000 22.88 5.62 0.00 2.57
148 149 2.089201 TCACTGCATGCAAGGATGAAG 58.911 47.619 22.88 9.78 35.34 3.02
149 150 2.089201 CACTGCATGCAAGGATGAAGA 58.911 47.619 22.88 0.00 33.13 2.87
150 151 2.490509 CACTGCATGCAAGGATGAAGAA 59.509 45.455 22.88 0.00 33.13 2.52
151 152 3.057104 CACTGCATGCAAGGATGAAGAAA 60.057 43.478 22.88 0.00 33.13 2.52
152 153 3.575256 ACTGCATGCAAGGATGAAGAAAA 59.425 39.130 22.88 0.00 33.13 2.29
153 154 4.039488 ACTGCATGCAAGGATGAAGAAAAA 59.961 37.500 22.88 0.00 33.13 1.94
174 175 6.418057 AAAAATTCACCAATGCCTGTAGAA 57.582 33.333 0.00 0.00 0.00 2.10
175 176 5.649782 AAATTCACCAATGCCTGTAGAAG 57.350 39.130 0.00 0.00 0.00 2.85
176 177 3.788227 TTCACCAATGCCTGTAGAAGT 57.212 42.857 0.00 0.00 0.00 3.01
177 178 3.788227 TCACCAATGCCTGTAGAAGTT 57.212 42.857 0.00 0.00 0.00 2.66
178 179 3.674997 TCACCAATGCCTGTAGAAGTTC 58.325 45.455 0.00 0.00 0.00 3.01
179 180 3.327757 TCACCAATGCCTGTAGAAGTTCT 59.672 43.478 10.87 10.87 0.00 3.01
180 181 4.074970 CACCAATGCCTGTAGAAGTTCTT 58.925 43.478 11.40 0.00 0.00 2.52
181 182 4.074970 ACCAATGCCTGTAGAAGTTCTTG 58.925 43.478 11.40 0.29 0.00 3.02
182 183 3.441572 CCAATGCCTGTAGAAGTTCTTGG 59.558 47.826 11.40 11.95 0.00 3.61
183 184 4.074970 CAATGCCTGTAGAAGTTCTTGGT 58.925 43.478 11.40 0.00 0.00 3.67
184 185 3.402628 TGCCTGTAGAAGTTCTTGGTC 57.597 47.619 11.40 8.21 0.00 4.02
185 186 2.703536 TGCCTGTAGAAGTTCTTGGTCA 59.296 45.455 11.40 10.28 0.00 4.02
186 187 3.327757 TGCCTGTAGAAGTTCTTGGTCAT 59.672 43.478 11.40 0.00 0.00 3.06
187 188 4.202461 TGCCTGTAGAAGTTCTTGGTCATT 60.202 41.667 11.40 0.00 0.00 2.57
188 189 4.762251 GCCTGTAGAAGTTCTTGGTCATTT 59.238 41.667 11.40 0.00 0.00 2.32
189 190 5.938125 GCCTGTAGAAGTTCTTGGTCATTTA 59.062 40.000 11.40 0.00 0.00 1.40
190 191 6.092807 GCCTGTAGAAGTTCTTGGTCATTTAG 59.907 42.308 11.40 0.00 0.00 1.85
191 192 7.162082 CCTGTAGAAGTTCTTGGTCATTTAGT 58.838 38.462 11.40 0.00 0.00 2.24
192 193 7.118390 CCTGTAGAAGTTCTTGGTCATTTAGTG 59.882 40.741 11.40 0.00 0.00 2.74
193 194 6.934645 TGTAGAAGTTCTTGGTCATTTAGTGG 59.065 38.462 11.40 0.00 0.00 4.00
194 195 5.941788 AGAAGTTCTTGGTCATTTAGTGGT 58.058 37.500 0.00 0.00 0.00 4.16
195 196 5.998363 AGAAGTTCTTGGTCATTTAGTGGTC 59.002 40.000 0.00 0.00 0.00 4.02
196 197 5.304686 AGTTCTTGGTCATTTAGTGGTCA 57.695 39.130 0.00 0.00 0.00 4.02
197 198 5.880901 AGTTCTTGGTCATTTAGTGGTCAT 58.119 37.500 0.00 0.00 0.00 3.06
198 199 5.707298 AGTTCTTGGTCATTTAGTGGTCATG 59.293 40.000 0.00 0.00 0.00 3.07
199 200 4.009675 TCTTGGTCATTTAGTGGTCATGC 58.990 43.478 0.00 0.00 0.00 4.06
200 201 3.431673 TGGTCATTTAGTGGTCATGCA 57.568 42.857 0.00 0.00 0.00 3.96
201 202 3.966979 TGGTCATTTAGTGGTCATGCAT 58.033 40.909 0.00 0.00 0.00 3.96
202 203 3.695556 TGGTCATTTAGTGGTCATGCATG 59.304 43.478 21.07 21.07 0.00 4.06
203 204 3.489738 GGTCATTTAGTGGTCATGCATGC 60.490 47.826 22.25 11.82 0.00 4.06
204 205 3.129113 GTCATTTAGTGGTCATGCATGCA 59.871 43.478 25.04 25.04 0.00 3.96
205 206 3.955551 TCATTTAGTGGTCATGCATGCAT 59.044 39.130 27.46 27.46 37.08 3.96
214 215 2.943449 CATGCATGCATGTGGTGTAA 57.057 45.000 40.30 10.77 46.20 2.41
215 216 3.446310 CATGCATGCATGTGGTGTAAT 57.554 42.857 40.30 14.19 46.20 1.89
216 217 3.787785 CATGCATGCATGTGGTGTAATT 58.212 40.909 40.30 13.68 46.20 1.40
217 218 4.934515 CATGCATGCATGTGGTGTAATTA 58.065 39.130 40.30 9.60 46.20 1.40
218 219 4.635833 TGCATGCATGTGGTGTAATTAG 57.364 40.909 26.79 0.00 0.00 1.73
219 220 4.015764 TGCATGCATGTGGTGTAATTAGT 58.984 39.130 26.79 0.00 0.00 2.24
220 221 4.142425 TGCATGCATGTGGTGTAATTAGTG 60.142 41.667 26.79 0.00 0.00 2.74
221 222 4.142403 GCATGCATGTGGTGTAATTAGTGT 60.142 41.667 26.79 0.00 0.00 3.55
222 223 5.065859 GCATGCATGTGGTGTAATTAGTGTA 59.934 40.000 26.79 0.00 0.00 2.90
223 224 6.238731 GCATGCATGTGGTGTAATTAGTGTAT 60.239 38.462 26.79 0.00 0.00 2.29
224 225 6.918892 TGCATGTGGTGTAATTAGTGTATC 57.081 37.500 0.00 0.00 0.00 2.24
225 226 5.522097 TGCATGTGGTGTAATTAGTGTATCG 59.478 40.000 0.00 0.00 0.00 2.92
226 227 5.050363 GCATGTGGTGTAATTAGTGTATCGG 60.050 44.000 0.00 0.00 0.00 4.18
227 228 5.664294 TGTGGTGTAATTAGTGTATCGGT 57.336 39.130 0.00 0.00 0.00 4.69
228 229 6.772360 TGTGGTGTAATTAGTGTATCGGTA 57.228 37.500 0.00 0.00 0.00 4.02
229 230 7.350744 TGTGGTGTAATTAGTGTATCGGTAT 57.649 36.000 0.00 0.00 0.00 2.73
230 231 8.462589 TGTGGTGTAATTAGTGTATCGGTATA 57.537 34.615 0.00 0.00 0.00 1.47
231 232 8.352201 TGTGGTGTAATTAGTGTATCGGTATAC 58.648 37.037 0.00 0.00 38.80 1.47
232 233 8.352201 GTGGTGTAATTAGTGTATCGGTATACA 58.648 37.037 5.33 0.00 44.51 2.29
245 246 8.905850 TGTATCGGTATACACAACTTTATGAGA 58.094 33.333 5.01 0.00 42.40 3.27
246 247 9.740239 GTATCGGTATACACAACTTTATGAGAA 57.260 33.333 5.01 0.00 38.30 2.87
248 249 9.661563 ATCGGTATACACAACTTTATGAGAAAA 57.338 29.630 5.01 0.00 0.00 2.29
249 250 9.491675 TCGGTATACACAACTTTATGAGAAAAA 57.508 29.630 5.01 0.00 0.00 1.94
250 251 9.537848 CGGTATACACAACTTTATGAGAAAAAC 57.462 33.333 5.01 0.00 0.00 2.43
251 252 9.537848 GGTATACACAACTTTATGAGAAAAACG 57.462 33.333 5.01 0.00 0.00 3.60
254 255 7.548196 ACACAACTTTATGAGAAAAACGAGA 57.452 32.000 0.00 0.00 0.00 4.04
255 256 7.630924 ACACAACTTTATGAGAAAAACGAGAG 58.369 34.615 0.00 0.00 0.00 3.20
280 281 6.884280 ACTAATTGAGTACTTTTGCAAGCT 57.116 33.333 0.00 0.00 36.27 3.74
281 282 7.979444 ACTAATTGAGTACTTTTGCAAGCTA 57.021 32.000 0.00 0.00 36.27 3.32
282 283 7.807680 ACTAATTGAGTACTTTTGCAAGCTAC 58.192 34.615 0.00 0.90 36.27 3.58
283 284 4.725556 TTGAGTACTTTTGCAAGCTACG 57.274 40.909 0.00 0.00 32.57 3.51
284 285 3.985008 TGAGTACTTTTGCAAGCTACGA 58.015 40.909 0.00 0.00 32.57 3.43
285 286 4.373527 TGAGTACTTTTGCAAGCTACGAA 58.626 39.130 0.00 0.00 32.57 3.85
286 287 4.812091 TGAGTACTTTTGCAAGCTACGAAA 59.188 37.500 0.00 0.00 32.57 3.46
287 288 5.468746 TGAGTACTTTTGCAAGCTACGAAAT 59.531 36.000 0.00 0.00 32.57 2.17
288 289 6.017440 TGAGTACTTTTGCAAGCTACGAAATT 60.017 34.615 0.00 1.53 32.57 1.82
289 290 7.171848 TGAGTACTTTTGCAAGCTACGAAATTA 59.828 33.333 0.00 0.75 32.57 1.40
290 291 7.867752 AGTACTTTTGCAAGCTACGAAATTAA 58.132 30.769 0.00 0.00 32.57 1.40
291 292 8.512138 AGTACTTTTGCAAGCTACGAAATTAAT 58.488 29.630 0.00 0.30 32.57 1.40
292 293 9.124807 GTACTTTTGCAAGCTACGAAATTAATT 57.875 29.630 0.00 0.00 32.57 1.40
293 294 8.587952 ACTTTTGCAAGCTACGAAATTAATTT 57.412 26.923 13.24 13.24 32.57 1.82
294 295 8.699749 ACTTTTGCAAGCTACGAAATTAATTTC 58.300 29.630 24.91 24.91 37.20 2.17
295 296 8.581057 TTTTGCAAGCTACGAAATTAATTTCA 57.419 26.923 30.60 17.20 44.83 2.69
296 297 7.561237 TTGCAAGCTACGAAATTAATTTCAC 57.439 32.000 30.60 20.06 44.83 3.18
297 298 6.090129 TGCAAGCTACGAAATTAATTTCACC 58.910 36.000 30.60 18.89 44.83 4.02
298 299 6.090129 GCAAGCTACGAAATTAATTTCACCA 58.910 36.000 30.60 18.24 44.83 4.17
299 300 6.751888 GCAAGCTACGAAATTAATTTCACCAT 59.248 34.615 30.60 19.10 44.83 3.55
300 301 7.275560 GCAAGCTACGAAATTAATTTCACCATT 59.724 33.333 30.60 19.01 44.83 3.16
301 302 8.798153 CAAGCTACGAAATTAATTTCACCATTC 58.202 33.333 30.60 18.02 44.83 2.67
302 303 8.050778 AGCTACGAAATTAATTTCACCATTCA 57.949 30.769 30.60 12.70 44.83 2.57
303 304 8.686334 AGCTACGAAATTAATTTCACCATTCAT 58.314 29.630 30.60 12.65 44.83 2.57
304 305 8.958043 GCTACGAAATTAATTTCACCATTCATC 58.042 33.333 30.60 9.55 44.83 2.92
307 308 9.874205 ACGAAATTAATTTCACCATTCATCATT 57.126 25.926 30.60 0.50 44.83 2.57
315 316 6.528537 TTCACCATTCATCATTTACCTTGG 57.471 37.500 0.00 0.00 0.00 3.61
316 317 5.579047 TCACCATTCATCATTTACCTTGGT 58.421 37.500 0.00 0.00 36.70 3.67
317 318 6.015918 TCACCATTCATCATTTACCTTGGTT 58.984 36.000 0.00 0.00 34.11 3.67
318 319 6.071447 TCACCATTCATCATTTACCTTGGTTG 60.071 38.462 0.00 0.00 34.11 3.77
319 320 6.015918 ACCATTCATCATTTACCTTGGTTGA 58.984 36.000 0.00 0.00 32.48 3.18
320 321 6.496565 ACCATTCATCATTTACCTTGGTTGAA 59.503 34.615 0.00 1.43 32.48 2.69
321 322 7.037438 CCATTCATCATTTACCTTGGTTGAAG 58.963 38.462 0.00 0.00 0.00 3.02
322 323 7.093814 CCATTCATCATTTACCTTGGTTGAAGA 60.094 37.037 0.00 0.00 32.82 2.87
323 324 7.452880 TTCATCATTTACCTTGGTTGAAGAG 57.547 36.000 0.00 0.00 32.82 2.85
324 325 6.778821 TCATCATTTACCTTGGTTGAAGAGA 58.221 36.000 0.00 0.00 32.82 3.10
325 326 7.405292 TCATCATTTACCTTGGTTGAAGAGAT 58.595 34.615 0.00 0.61 32.82 2.75
326 327 7.890127 TCATCATTTACCTTGGTTGAAGAGATT 59.110 33.333 0.00 0.00 32.82 2.40
327 328 8.526147 CATCATTTACCTTGGTTGAAGAGATTT 58.474 33.333 0.00 0.00 32.82 2.17
328 329 8.110860 TCATTTACCTTGGTTGAAGAGATTTC 57.889 34.615 0.00 0.00 32.82 2.17
329 330 6.894339 TTTACCTTGGTTGAAGAGATTTCC 57.106 37.500 0.00 0.00 32.82 3.13
330 331 4.453480 ACCTTGGTTGAAGAGATTTCCA 57.547 40.909 0.00 0.00 32.82 3.53
331 332 4.803452 ACCTTGGTTGAAGAGATTTCCAA 58.197 39.130 0.00 0.00 32.82 3.53
332 333 5.208121 ACCTTGGTTGAAGAGATTTCCAAA 58.792 37.500 0.00 0.00 35.10 3.28
333 334 5.840693 ACCTTGGTTGAAGAGATTTCCAAAT 59.159 36.000 0.00 0.00 35.10 2.32
334 335 6.327365 ACCTTGGTTGAAGAGATTTCCAAATT 59.673 34.615 0.00 0.00 35.10 1.82
335 336 7.508977 ACCTTGGTTGAAGAGATTTCCAAATTA 59.491 33.333 0.00 0.00 35.10 1.40
336 337 8.367156 CCTTGGTTGAAGAGATTTCCAAATTAA 58.633 33.333 0.00 0.00 35.10 1.40
337 338 9.415544 CTTGGTTGAAGAGATTTCCAAATTAAG 57.584 33.333 0.00 0.00 35.10 1.85
338 339 7.378181 TGGTTGAAGAGATTTCCAAATTAAGC 58.622 34.615 0.00 0.00 0.00 3.09
339 340 6.813649 GGTTGAAGAGATTTCCAAATTAAGCC 59.186 38.462 0.00 0.00 0.00 4.35
340 341 6.530019 TGAAGAGATTTCCAAATTAAGCCC 57.470 37.500 0.00 0.00 0.00 5.19
341 342 6.256053 TGAAGAGATTTCCAAATTAAGCCCT 58.744 36.000 0.00 0.00 0.00 5.19
342 343 7.410174 TGAAGAGATTTCCAAATTAAGCCCTA 58.590 34.615 0.00 0.00 0.00 3.53
343 344 8.061304 TGAAGAGATTTCCAAATTAAGCCCTAT 58.939 33.333 0.00 0.00 0.00 2.57
344 345 9.574516 GAAGAGATTTCCAAATTAAGCCCTATA 57.425 33.333 0.00 0.00 0.00 1.31
345 346 9.936329 AAGAGATTTCCAAATTAAGCCCTATAA 57.064 29.630 0.00 0.00 0.00 0.98
346 347 9.936329 AGAGATTTCCAAATTAAGCCCTATAAA 57.064 29.630 0.00 0.00 0.00 1.40
347 348 9.967346 GAGATTTCCAAATTAAGCCCTATAAAC 57.033 33.333 0.00 0.00 0.00 2.01
348 349 8.924303 AGATTTCCAAATTAAGCCCTATAAACC 58.076 33.333 0.00 0.00 0.00 3.27
349 350 6.702716 TTCCAAATTAAGCCCTATAAACCG 57.297 37.500 0.00 0.00 0.00 4.44
350 351 6.003859 TCCAAATTAAGCCCTATAAACCGA 57.996 37.500 0.00 0.00 0.00 4.69
351 352 6.424883 TCCAAATTAAGCCCTATAAACCGAA 58.575 36.000 0.00 0.00 0.00 4.30
352 353 6.890814 TCCAAATTAAGCCCTATAAACCGAAA 59.109 34.615 0.00 0.00 0.00 3.46
353 354 7.396623 TCCAAATTAAGCCCTATAAACCGAAAA 59.603 33.333 0.00 0.00 0.00 2.29
354 355 7.704899 CCAAATTAAGCCCTATAAACCGAAAAG 59.295 37.037 0.00 0.00 0.00 2.27
355 356 8.463607 CAAATTAAGCCCTATAAACCGAAAAGA 58.536 33.333 0.00 0.00 0.00 2.52
356 357 8.584063 AATTAAGCCCTATAAACCGAAAAGAA 57.416 30.769 0.00 0.00 0.00 2.52
357 358 7.619964 TTAAGCCCTATAAACCGAAAAGAAG 57.380 36.000 0.00 0.00 0.00 2.85
358 359 4.524053 AGCCCTATAAACCGAAAAGAAGG 58.476 43.478 0.00 0.00 0.00 3.46
359 360 3.630769 GCCCTATAAACCGAAAAGAAGGG 59.369 47.826 0.00 0.00 44.43 3.95
360 361 4.627013 GCCCTATAAACCGAAAAGAAGGGA 60.627 45.833 8.25 0.00 44.39 4.20
361 362 5.123936 CCCTATAAACCGAAAAGAAGGGAG 58.876 45.833 0.00 0.00 44.39 4.30
362 363 5.338953 CCCTATAAACCGAAAAGAAGGGAGT 60.339 44.000 0.00 0.00 44.39 3.85
363 364 6.126968 CCCTATAAACCGAAAAGAAGGGAGTA 60.127 42.308 0.00 0.00 44.39 2.59
364 365 7.419865 CCCTATAAACCGAAAAGAAGGGAGTAT 60.420 40.741 0.00 0.00 44.39 2.12
365 366 8.645110 CCTATAAACCGAAAAGAAGGGAGTATA 58.355 37.037 0.00 0.00 0.00 1.47
370 371 9.916360 AAACCGAAAAGAAGGGAGTATATTAAT 57.084 29.630 0.00 0.00 0.00 1.40
371 372 9.916360 AACCGAAAAGAAGGGAGTATATTAATT 57.084 29.630 0.00 0.00 0.00 1.40
382 383 9.041354 AGGGAGTATATTAATTAAGCAGAGAGG 57.959 37.037 3.94 0.00 0.00 3.69
383 384 9.036980 GGGAGTATATTAATTAAGCAGAGAGGA 57.963 37.037 3.94 0.00 0.00 3.71
390 391 8.729805 ATTAATTAAGCAGAGAGGAGAGTTTG 57.270 34.615 3.94 0.00 0.00 2.93
391 392 5.753721 ATTAAGCAGAGAGGAGAGTTTGT 57.246 39.130 0.00 0.00 0.00 2.83
392 393 5.552870 TTAAGCAGAGAGGAGAGTTTGTT 57.447 39.130 0.00 0.00 0.00 2.83
393 394 6.665992 TTAAGCAGAGAGGAGAGTTTGTTA 57.334 37.500 0.00 0.00 0.00 2.41
394 395 4.529109 AGCAGAGAGGAGAGTTTGTTAC 57.471 45.455 0.00 0.00 0.00 2.50
395 396 3.898123 AGCAGAGAGGAGAGTTTGTTACA 59.102 43.478 0.00 0.00 0.00 2.41
396 397 4.345257 AGCAGAGAGGAGAGTTTGTTACAA 59.655 41.667 0.00 0.00 0.00 2.41
397 398 5.012561 AGCAGAGAGGAGAGTTTGTTACAAT 59.987 40.000 0.00 0.00 0.00 2.71
398 399 6.211584 AGCAGAGAGGAGAGTTTGTTACAATA 59.788 38.462 0.00 0.00 0.00 1.90
399 400 6.533367 GCAGAGAGGAGAGTTTGTTACAATAG 59.467 42.308 0.00 0.00 0.00 1.73
400 401 7.577807 GCAGAGAGGAGAGTTTGTTACAATAGA 60.578 40.741 0.00 0.00 0.00 1.98
401 402 7.757624 CAGAGAGGAGAGTTTGTTACAATAGAC 59.242 40.741 0.00 0.00 0.00 2.59
402 403 6.937392 AGAGGAGAGTTTGTTACAATAGACC 58.063 40.000 0.00 0.33 0.00 3.85
403 404 6.051179 AGGAGAGTTTGTTACAATAGACCC 57.949 41.667 0.00 0.00 0.00 4.46
404 405 5.045797 AGGAGAGTTTGTTACAATAGACCCC 60.046 44.000 0.00 0.00 0.00 4.95
405 406 5.045797 GGAGAGTTTGTTACAATAGACCCCT 60.046 44.000 0.00 0.00 0.00 4.79
406 407 6.449830 AGAGTTTGTTACAATAGACCCCTT 57.550 37.500 0.00 0.00 0.00 3.95
407 408 7.310858 GGAGAGTTTGTTACAATAGACCCCTTA 60.311 40.741 0.00 0.00 0.00 2.69
408 409 7.392418 AGAGTTTGTTACAATAGACCCCTTAC 58.608 38.462 0.00 0.00 0.00 2.34
409 410 7.016858 AGAGTTTGTTACAATAGACCCCTTACA 59.983 37.037 0.00 0.00 0.00 2.41
410 411 6.938596 AGTTTGTTACAATAGACCCCTTACAC 59.061 38.462 0.00 0.00 0.00 2.90
411 412 6.436738 TTGTTACAATAGACCCCTTACACA 57.563 37.500 0.00 0.00 0.00 3.72
412 413 6.045072 TGTTACAATAGACCCCTTACACAG 57.955 41.667 0.00 0.00 0.00 3.66
413 414 3.629142 ACAATAGACCCCTTACACAGC 57.371 47.619 0.00 0.00 0.00 4.40
414 415 2.910319 ACAATAGACCCCTTACACAGCA 59.090 45.455 0.00 0.00 0.00 4.41
415 416 3.055094 ACAATAGACCCCTTACACAGCAG 60.055 47.826 0.00 0.00 0.00 4.24
420 421 0.539051 CCCCTTACACAGCAGAGAGG 59.461 60.000 0.00 0.00 0.00 3.69
421 422 1.561643 CCCTTACACAGCAGAGAGGA 58.438 55.000 0.00 0.00 0.00 3.71
521 531 3.138884 TGGTTGCTTCTGCTTCATACA 57.861 42.857 0.00 0.00 40.48 2.29
522 532 3.689347 TGGTTGCTTCTGCTTCATACAT 58.311 40.909 0.00 0.00 40.48 2.29
523 533 4.081406 TGGTTGCTTCTGCTTCATACATT 58.919 39.130 0.00 0.00 40.48 2.71
524 534 4.156556 TGGTTGCTTCTGCTTCATACATTC 59.843 41.667 0.00 0.00 40.48 2.67
525 535 4.156556 GGTTGCTTCTGCTTCATACATTCA 59.843 41.667 0.00 0.00 40.48 2.57
526 536 5.163581 GGTTGCTTCTGCTTCATACATTCAT 60.164 40.000 0.00 0.00 40.48 2.57
527 537 6.038603 GGTTGCTTCTGCTTCATACATTCATA 59.961 38.462 0.00 0.00 40.48 2.15
528 538 6.609237 TGCTTCTGCTTCATACATTCATAC 57.391 37.500 0.00 0.00 40.48 2.39
561 571 2.752354 CCATGTTTGATTAGTCGCCCAA 59.248 45.455 0.00 0.00 0.00 4.12
568 582 2.682856 TGATTAGTCGCCCAATTTGCTC 59.317 45.455 0.00 0.00 0.00 4.26
571 585 2.359850 TCGCCCAATTTGCTCGCT 60.360 55.556 0.00 0.00 0.00 4.93
577 591 0.098728 CCAATTTGCTCGCTAACGGG 59.901 55.000 0.00 0.00 44.94 5.28
578 592 0.802494 CAATTTGCTCGCTAACGGGT 59.198 50.000 0.00 0.00 43.62 5.28
579 593 2.004017 CAATTTGCTCGCTAACGGGTA 58.996 47.619 0.00 0.00 43.62 3.69
584 598 3.293311 TGCTCGCTAACGGGTATATTC 57.707 47.619 0.00 0.00 43.62 1.75
669 690 9.588096 AATTGGAACTAATACTTTCCCCATATC 57.412 33.333 0.00 0.00 40.68 1.63
677 700 4.797912 ACTTTCCCCATATCTTTCCTCC 57.202 45.455 0.00 0.00 0.00 4.30
773 800 0.515564 ACGCCGAATTGTTTTCTCCG 59.484 50.000 0.00 0.00 0.00 4.63
808 835 1.001181 TGTGCTTTGGACTACGTACCC 59.999 52.381 0.00 0.00 0.00 3.69
892 922 4.284378 ACGTACGTCTCTGGCTATAAAC 57.716 45.455 16.72 0.00 0.00 2.01
980 1019 4.379302 TCCATCTCTAGCTATCAGCAGA 57.621 45.455 0.00 1.40 45.56 4.26
985 1024 2.622470 CTCTAGCTATCAGCAGAGCACA 59.378 50.000 11.80 0.00 45.56 4.57
1015 1054 1.753470 CTCATGCCTAGCCTGAGGG 59.247 63.158 12.41 0.00 43.86 4.30
1065 1104 2.123342 CTCGCGTCCAAGATGAAGATC 58.877 52.381 5.77 0.00 0.00 2.75
1138 1177 3.071206 GCAGGCTCCTCGTCCTCA 61.071 66.667 0.00 0.00 0.00 3.86
1241 1280 4.148825 CCTCGACAAGGCCCTCGG 62.149 72.222 13.51 6.09 38.67 4.63
1349 1391 2.434843 ATCAAGAGGATGGCGGCGA 61.435 57.895 12.98 0.00 34.06 5.54
1350 1392 2.650813 ATCAAGAGGATGGCGGCGAC 62.651 60.000 12.98 9.31 34.06 5.19
1449 1491 4.326153 GATGATGACAGCGCGCTA 57.674 55.556 36.02 20.25 0.00 4.26
1464 1506 3.258225 GCTACTCGATGTGTGCGAT 57.742 52.632 0.00 0.00 37.13 4.58
1468 1510 3.609409 GCTACTCGATGTGTGCGATGATA 60.609 47.826 0.00 0.00 37.13 2.15
1520 1562 0.460987 GTGATCAGGAGCAACCGGAG 60.461 60.000 9.46 0.15 45.15 4.63
1584 1626 2.108514 CGCCGGCATGTTCATCACT 61.109 57.895 28.98 0.00 0.00 3.41
1665 1793 2.563261 ACTGACCGAGTGACAGTAGA 57.437 50.000 0.00 0.00 42.01 2.59
1679 1807 4.457257 TGACAGTAGATAGATCGATGCTGG 59.543 45.833 0.54 0.00 0.00 4.85
1743 1871 4.448732 GGTGAAAAATGACATGGCTGTTTC 59.551 41.667 0.00 7.60 35.14 2.78
1763 1891 4.968971 TCTCGAAAAGAGGGTTAAACCT 57.031 40.909 13.26 13.26 46.82 3.50
1770 1898 2.437180 GGGTTAAACCTCCCCGCG 60.437 66.667 0.96 0.00 38.64 6.46
1802 1930 3.812156 TGGATATGGTGAAGGTGTACG 57.188 47.619 0.00 0.00 0.00 3.67
1820 1948 6.863126 GGTGTACGTACATATATAAAGCGGTT 59.137 38.462 29.58 0.00 38.63 4.44
1821 1949 7.148918 GGTGTACGTACATATATAAAGCGGTTG 60.149 40.741 29.58 0.00 38.63 3.77
1824 1952 7.775397 ACGTACATATATAAAGCGGTTGTTT 57.225 32.000 0.00 0.00 0.00 2.83
1825 1953 8.870160 ACGTACATATATAAAGCGGTTGTTTA 57.130 30.769 0.00 0.00 0.00 2.01
1826 1954 8.755018 ACGTACATATATAAAGCGGTTGTTTAC 58.245 33.333 0.00 0.00 0.00 2.01
1827 1955 7.940960 CGTACATATATAAAGCGGTTGTTTACG 59.059 37.037 0.00 0.00 0.00 3.18
1854 1982 6.545504 AAAGTCTATACACAGCACTGTTTG 57.454 37.500 0.00 0.00 42.83 2.93
1911 2039 6.323739 TCTGAAAAATTGGCAACTACTTCCTT 59.676 34.615 0.00 0.00 37.61 3.36
1982 2192 8.978539 GGAAGAAAAAGATTGATAAACCAACAC 58.021 33.333 0.00 0.00 0.00 3.32
2001 2211 5.164606 ACACGTAAAGTAGCCTGTTTTTG 57.835 39.130 0.00 0.00 0.00 2.44
2003 2213 5.816777 ACACGTAAAGTAGCCTGTTTTTGTA 59.183 36.000 0.00 0.00 0.00 2.41
2012 2222 7.593825 AGTAGCCTGTTTTTGTATTGATCAAC 58.406 34.615 11.07 0.00 0.00 3.18
2029 2239 2.302445 TCAACCATTGGGAAGCCAAATG 59.698 45.455 7.78 6.59 38.05 2.32
2031 2241 1.624813 ACCATTGGGAAGCCAAATGTG 59.375 47.619 7.78 6.65 38.05 3.21
2093 2303 8.450578 TGAAGATGTTTGTTTGTTCTAGTGAT 57.549 30.769 0.00 0.00 0.00 3.06
2147 2357 6.500684 ACCACTTTAGCTATGACAAATGTG 57.499 37.500 0.00 0.00 0.00 3.21
2150 2360 6.403636 CCACTTTAGCTATGACAAATGTGGTC 60.404 42.308 16.22 0.00 37.17 4.02
2176 2386 6.211515 ACTGTTTACTACTTGGAGTACAACG 58.788 40.000 0.00 0.00 34.76 4.10
2213 2423 4.580580 ACCTGGAGATTCGGATTAATTTGC 59.419 41.667 0.00 0.00 0.00 3.68
2214 2424 4.022849 CCTGGAGATTCGGATTAATTTGCC 60.023 45.833 0.00 0.00 0.00 4.52
2215 2425 4.531854 TGGAGATTCGGATTAATTTGCCA 58.468 39.130 0.00 0.00 0.00 4.92
2261 2475 7.012989 GGATTTCGGCCCGCTTTATATATAAAT 59.987 37.037 16.41 0.00 32.36 1.40
2296 2510 1.102154 CACAACCAAGTCAAGTGCCA 58.898 50.000 0.00 0.00 0.00 4.92
2313 2527 9.114952 TCAAGTGCCACATCGAATATAAAATTA 57.885 29.630 0.00 0.00 0.00 1.40
2318 2532 8.236586 TGCCACATCGAATATAAAATTATCTGC 58.763 33.333 0.00 0.00 0.00 4.26
2324 2538 6.374333 TCGAATATAAAATTATCTGCTGGGGC 59.626 38.462 0.00 0.00 39.26 5.80
2349 2563 1.134175 ACACAAACACGCCCAAGAAAG 59.866 47.619 0.00 0.00 0.00 2.62
2356 2570 3.270877 ACACGCCCAAGAAAGATCATAC 58.729 45.455 0.00 0.00 0.00 2.39
2359 2573 4.155826 CACGCCCAAGAAAGATCATACAAA 59.844 41.667 0.00 0.00 0.00 2.83
2362 2576 5.801947 CGCCCAAGAAAGATCATACAAAAAG 59.198 40.000 0.00 0.00 0.00 2.27
2363 2577 6.349280 CGCCCAAGAAAGATCATACAAAAAGA 60.349 38.462 0.00 0.00 0.00 2.52
2366 2580 8.796475 CCCAAGAAAGATCATACAAAAAGAGAA 58.204 33.333 0.00 0.00 0.00 2.87
2367 2581 9.837525 CCAAGAAAGATCATACAAAAAGAGAAG 57.162 33.333 0.00 0.00 0.00 2.85
2425 2641 0.375106 GGCAAAGCTAGTCGATGTGC 59.625 55.000 0.00 0.00 0.00 4.57
2426 2642 1.078709 GCAAAGCTAGTCGATGTGCA 58.921 50.000 8.69 0.00 0.00 4.57
2472 2688 1.379044 CCAAGCTGGTCACCATCCC 60.379 63.158 0.00 0.00 30.82 3.85
2476 2692 2.124983 CTGGTCACCATCCCGCTG 60.125 66.667 0.00 0.00 30.82 5.18
2480 2696 1.327690 GGTCACCATCCCGCTGTCTA 61.328 60.000 0.00 0.00 0.00 2.59
2485 2701 0.671251 CCATCCCGCTGTCTAGAGAC 59.329 60.000 2.56 2.56 44.97 3.36
2486 2702 1.686355 CATCCCGCTGTCTAGAGACT 58.314 55.000 10.87 0.00 44.99 3.24
2509 2725 2.222027 GTGCCAGTGCTACAAGAAAGT 58.778 47.619 0.00 0.00 38.71 2.66
2521 2740 7.589221 GTGCTACAAGAAAGTGAATTTGAAGAG 59.411 37.037 0.00 0.00 0.00 2.85
2524 2743 9.265901 CTACAAGAAAGTGAATTTGAAGAGAGA 57.734 33.333 0.00 0.00 0.00 3.10
2525 2744 8.152309 ACAAGAAAGTGAATTTGAAGAGAGAG 57.848 34.615 0.00 0.00 0.00 3.20
2526 2745 7.772757 ACAAGAAAGTGAATTTGAAGAGAGAGT 59.227 33.333 0.00 0.00 0.00 3.24
2527 2746 8.619546 CAAGAAAGTGAATTTGAAGAGAGAGTT 58.380 33.333 0.00 0.00 0.00 3.01
2528 2747 8.152309 AGAAAGTGAATTTGAAGAGAGAGTTG 57.848 34.615 0.00 0.00 0.00 3.16
2530 2749 6.179906 AGTGAATTTGAAGAGAGAGTTGGA 57.820 37.500 0.00 0.00 0.00 3.53
2531 2750 6.229733 AGTGAATTTGAAGAGAGAGTTGGAG 58.770 40.000 0.00 0.00 0.00 3.86
2532 2751 5.411053 GTGAATTTGAAGAGAGAGTTGGAGG 59.589 44.000 0.00 0.00 0.00 4.30
2534 2753 1.270907 TGAAGAGAGAGTTGGAGGCC 58.729 55.000 0.00 0.00 0.00 5.19
2536 2755 0.178891 AAGAGAGAGTTGGAGGCCCA 60.179 55.000 0.00 0.00 41.64 5.36
2537 2756 0.043940 AGAGAGAGTTGGAGGCCCAT 59.956 55.000 0.00 0.00 43.12 4.00
2538 2757 0.467804 GAGAGAGTTGGAGGCCCATC 59.532 60.000 0.00 0.00 43.12 3.51
2539 2758 0.043940 AGAGAGTTGGAGGCCCATCT 59.956 55.000 0.00 0.00 43.36 2.90
2570 2789 3.055458 TCCGCTCAATCACCATCTTGTTA 60.055 43.478 0.00 0.00 0.00 2.41
2577 2796 6.169800 TCAATCACCATCTTGTTACGAATCA 58.830 36.000 0.00 0.00 0.00 2.57
2579 2798 7.984617 TCAATCACCATCTTGTTACGAATCATA 59.015 33.333 0.00 0.00 0.00 2.15
2586 2805 6.344572 TCTTGTTACGAATCATACACATGC 57.655 37.500 0.00 0.00 31.73 4.06
2606 2825 5.503662 TGCAATGAATTTATGATGCGAGT 57.496 34.783 3.33 0.00 36.62 4.18
2607 2826 5.893687 TGCAATGAATTTATGATGCGAGTT 58.106 33.333 3.33 0.00 36.62 3.01
2608 2827 7.025485 TGCAATGAATTTATGATGCGAGTTA 57.975 32.000 3.33 0.00 36.62 2.24
2609 2828 7.479150 TGCAATGAATTTATGATGCGAGTTAA 58.521 30.769 3.33 0.00 36.62 2.01
2610 2829 8.136800 TGCAATGAATTTATGATGCGAGTTAAT 58.863 29.630 3.33 0.00 36.62 1.40
2611 2830 8.633408 GCAATGAATTTATGATGCGAGTTAATC 58.367 33.333 0.00 0.00 0.00 1.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 0.107643 GAGGGAGTATGAGGCAAGCC 59.892 60.000 2.02 2.02 0.00 4.35
6 7 0.107643 GGAGGGAGTATGAGGCAAGC 59.892 60.000 0.00 0.00 0.00 4.01
7 8 1.799933 AGGAGGGAGTATGAGGCAAG 58.200 55.000 0.00 0.00 0.00 4.01
8 9 2.270434 AAGGAGGGAGTATGAGGCAA 57.730 50.000 0.00 0.00 0.00 4.52
9 10 2.119495 GAAAGGAGGGAGTATGAGGCA 58.881 52.381 0.00 0.00 0.00 4.75
10 11 2.103941 CAGAAAGGAGGGAGTATGAGGC 59.896 54.545 0.00 0.00 0.00 4.70
11 12 2.703007 CCAGAAAGGAGGGAGTATGAGG 59.297 54.545 0.00 0.00 41.22 3.86
12 13 3.379452 ACCAGAAAGGAGGGAGTATGAG 58.621 50.000 0.00 0.00 41.22 2.90
13 14 3.491766 ACCAGAAAGGAGGGAGTATGA 57.508 47.619 0.00 0.00 41.22 2.15
14 15 4.576330 AAACCAGAAAGGAGGGAGTATG 57.424 45.455 0.00 0.00 41.22 2.39
15 16 6.559157 CCTATAAACCAGAAAGGAGGGAGTAT 59.441 42.308 0.00 0.00 41.22 2.12
16 17 5.903589 CCTATAAACCAGAAAGGAGGGAGTA 59.096 44.000 0.00 0.00 41.22 2.59
17 18 4.722279 CCTATAAACCAGAAAGGAGGGAGT 59.278 45.833 0.00 0.00 41.22 3.85
18 19 4.445019 GCCTATAAACCAGAAAGGAGGGAG 60.445 50.000 0.00 0.00 41.22 4.30
19 20 3.458487 GCCTATAAACCAGAAAGGAGGGA 59.542 47.826 0.00 0.00 41.22 4.20
20 21 3.459969 AGCCTATAAACCAGAAAGGAGGG 59.540 47.826 0.00 0.00 41.22 4.30
21 22 4.164221 TGAGCCTATAAACCAGAAAGGAGG 59.836 45.833 0.00 0.00 41.22 4.30
22 23 5.359194 TGAGCCTATAAACCAGAAAGGAG 57.641 43.478 0.00 0.00 41.22 3.69
23 24 5.191722 ACATGAGCCTATAAACCAGAAAGGA 59.808 40.000 0.00 0.00 41.22 3.36
24 25 5.440610 ACATGAGCCTATAAACCAGAAAGG 58.559 41.667 0.00 0.00 45.67 3.11
25 26 6.115446 TGACATGAGCCTATAAACCAGAAAG 58.885 40.000 0.00 0.00 0.00 2.62
26 27 6.061022 TGACATGAGCCTATAAACCAGAAA 57.939 37.500 0.00 0.00 0.00 2.52
27 28 5.692115 TGACATGAGCCTATAAACCAGAA 57.308 39.130 0.00 0.00 0.00 3.02
28 29 5.692115 TTGACATGAGCCTATAAACCAGA 57.308 39.130 0.00 0.00 0.00 3.86
29 30 6.183360 CCTTTTGACATGAGCCTATAAACCAG 60.183 42.308 0.00 0.00 0.00 4.00
30 31 5.652014 CCTTTTGACATGAGCCTATAAACCA 59.348 40.000 0.00 0.00 0.00 3.67
31 32 5.652452 ACCTTTTGACATGAGCCTATAAACC 59.348 40.000 0.00 0.00 0.00 3.27
32 33 6.759497 ACCTTTTGACATGAGCCTATAAAC 57.241 37.500 0.00 0.00 0.00 2.01
33 34 7.232534 ACAAACCTTTTGACATGAGCCTATAAA 59.767 33.333 0.00 0.00 0.00 1.40
34 35 6.719370 ACAAACCTTTTGACATGAGCCTATAA 59.281 34.615 0.00 0.00 0.00 0.98
35 36 6.245408 ACAAACCTTTTGACATGAGCCTATA 58.755 36.000 0.00 0.00 0.00 1.31
36 37 5.079643 ACAAACCTTTTGACATGAGCCTAT 58.920 37.500 0.00 0.00 0.00 2.57
37 38 4.469657 ACAAACCTTTTGACATGAGCCTA 58.530 39.130 0.00 0.00 0.00 3.93
38 39 3.299503 ACAAACCTTTTGACATGAGCCT 58.700 40.909 0.00 0.00 0.00 4.58
39 40 3.733443 ACAAACCTTTTGACATGAGCC 57.267 42.857 0.00 0.00 0.00 4.70
40 41 5.006649 GGAAAACAAACCTTTTGACATGAGC 59.993 40.000 0.00 0.00 0.00 4.26
41 42 6.256321 CAGGAAAACAAACCTTTTGACATGAG 59.744 38.462 0.00 0.00 33.91 2.90
42 43 6.105333 CAGGAAAACAAACCTTTTGACATGA 58.895 36.000 0.00 0.00 33.91 3.07
43 44 5.874261 ACAGGAAAACAAACCTTTTGACATG 59.126 36.000 5.67 0.00 33.91 3.21
44 45 6.048732 ACAGGAAAACAAACCTTTTGACAT 57.951 33.333 5.67 0.00 33.91 3.06
45 46 5.476091 ACAGGAAAACAAACCTTTTGACA 57.524 34.783 5.67 0.00 33.91 3.58
46 47 6.795098 AAACAGGAAAACAAACCTTTTGAC 57.205 33.333 5.67 0.00 33.91 3.18
51 52 9.811995 GACTTATAAAACAGGAAAACAAACCTT 57.188 29.630 0.00 0.00 33.91 3.50
52 53 9.197306 AGACTTATAAAACAGGAAAACAAACCT 57.803 29.630 0.00 0.00 36.92 3.50
53 54 9.459640 GAGACTTATAAAACAGGAAAACAAACC 57.540 33.333 0.00 0.00 0.00 3.27
84 85 9.807921 TCTGATCATGTGATGGTAAGTAGTATA 57.192 33.333 0.00 0.00 34.37 1.47
85 86 8.712228 TCTGATCATGTGATGGTAAGTAGTAT 57.288 34.615 0.00 0.00 34.37 2.12
86 87 8.712228 ATCTGATCATGTGATGGTAAGTAGTA 57.288 34.615 0.00 0.00 34.37 1.82
87 88 7.609097 ATCTGATCATGTGATGGTAAGTAGT 57.391 36.000 0.00 0.00 34.37 2.73
88 89 8.899427 AAATCTGATCATGTGATGGTAAGTAG 57.101 34.615 0.00 0.00 34.37 2.57
90 91 9.857656 ATAAAATCTGATCATGTGATGGTAAGT 57.142 29.630 0.00 0.00 34.37 2.24
92 93 9.070179 CCATAAAATCTGATCATGTGATGGTAA 57.930 33.333 0.00 0.00 34.37 2.85
93 94 8.219868 ACCATAAAATCTGATCATGTGATGGTA 58.780 33.333 18.31 6.91 41.09 3.25
94 95 7.013942 CACCATAAAATCTGATCATGTGATGGT 59.986 37.037 15.83 15.83 43.09 3.55
95 96 7.013942 ACACCATAAAATCTGATCATGTGATGG 59.986 37.037 14.93 14.93 36.89 3.51
96 97 7.937649 ACACCATAAAATCTGATCATGTGATG 58.062 34.615 0.00 0.00 34.37 3.07
97 98 9.803507 ATACACCATAAAATCTGATCATGTGAT 57.196 29.630 0.00 0.00 37.51 3.06
98 99 9.631257 AATACACCATAAAATCTGATCATGTGA 57.369 29.630 0.00 0.00 0.00 3.58
111 112 9.800433 CATGCAGTGATTTAATACACCATAAAA 57.200 29.630 0.00 0.00 37.69 1.52
112 113 7.920151 GCATGCAGTGATTTAATACACCATAAA 59.080 33.333 14.21 0.00 37.69 1.40
113 114 7.067981 TGCATGCAGTGATTTAATACACCATAA 59.932 33.333 18.46 0.00 37.69 1.90
114 115 6.545298 TGCATGCAGTGATTTAATACACCATA 59.455 34.615 18.46 0.00 37.69 2.74
115 116 5.360429 TGCATGCAGTGATTTAATACACCAT 59.640 36.000 18.46 4.64 37.69 3.55
116 117 4.704057 TGCATGCAGTGATTTAATACACCA 59.296 37.500 18.46 0.00 37.69 4.17
117 118 5.247507 TGCATGCAGTGATTTAATACACC 57.752 39.130 18.46 0.00 37.69 4.16
118 119 5.745294 CCTTGCATGCAGTGATTTAATACAC 59.255 40.000 21.50 0.00 37.30 2.90
119 120 5.651576 TCCTTGCATGCAGTGATTTAATACA 59.348 36.000 21.50 0.00 0.00 2.29
120 121 6.135290 TCCTTGCATGCAGTGATTTAATAC 57.865 37.500 21.50 0.00 0.00 1.89
121 122 6.546772 TCATCCTTGCATGCAGTGATTTAATA 59.453 34.615 23.70 6.31 0.00 0.98
122 123 5.361571 TCATCCTTGCATGCAGTGATTTAAT 59.638 36.000 23.70 8.04 0.00 1.40
123 124 4.705991 TCATCCTTGCATGCAGTGATTTAA 59.294 37.500 23.70 13.77 0.00 1.52
124 125 4.271661 TCATCCTTGCATGCAGTGATTTA 58.728 39.130 23.70 15.58 0.00 1.40
125 126 3.093814 TCATCCTTGCATGCAGTGATTT 58.906 40.909 23.70 9.19 0.00 2.17
126 127 2.730382 TCATCCTTGCATGCAGTGATT 58.270 42.857 23.70 11.87 0.00 2.57
127 128 2.430248 TCATCCTTGCATGCAGTGAT 57.570 45.000 21.50 21.60 0.00 3.06
128 129 2.089201 CTTCATCCTTGCATGCAGTGA 58.911 47.619 21.50 20.36 0.00 3.41
129 130 2.089201 TCTTCATCCTTGCATGCAGTG 58.911 47.619 21.50 16.94 0.00 3.66
130 131 2.502142 TCTTCATCCTTGCATGCAGT 57.498 45.000 21.50 5.83 0.00 4.40
131 132 3.861276 TTTCTTCATCCTTGCATGCAG 57.139 42.857 21.50 14.51 0.00 4.41
132 133 4.603989 TTTTTCTTCATCCTTGCATGCA 57.396 36.364 18.46 18.46 0.00 3.96
151 152 6.041979 ACTTCTACAGGCATTGGTGAATTTTT 59.958 34.615 0.00 0.00 0.00 1.94
152 153 5.539955 ACTTCTACAGGCATTGGTGAATTTT 59.460 36.000 0.00 0.00 0.00 1.82
153 154 5.079643 ACTTCTACAGGCATTGGTGAATTT 58.920 37.500 0.00 0.00 0.00 1.82
154 155 4.666512 ACTTCTACAGGCATTGGTGAATT 58.333 39.130 0.00 0.00 0.00 2.17
155 156 4.307032 ACTTCTACAGGCATTGGTGAAT 57.693 40.909 0.00 0.00 0.00 2.57
156 157 3.788227 ACTTCTACAGGCATTGGTGAA 57.212 42.857 0.00 0.00 0.00 3.18
157 158 3.327757 AGAACTTCTACAGGCATTGGTGA 59.672 43.478 0.00 0.00 0.00 4.02
158 159 3.679389 AGAACTTCTACAGGCATTGGTG 58.321 45.455 0.00 0.00 0.00 4.17
159 160 4.074970 CAAGAACTTCTACAGGCATTGGT 58.925 43.478 0.00 0.00 0.00 3.67
160 161 3.441572 CCAAGAACTTCTACAGGCATTGG 59.558 47.826 0.00 0.00 0.00 3.16
161 162 4.074970 ACCAAGAACTTCTACAGGCATTG 58.925 43.478 0.00 0.00 0.00 2.82
162 163 4.202461 TGACCAAGAACTTCTACAGGCATT 60.202 41.667 0.00 0.00 0.00 3.56
163 164 3.327757 TGACCAAGAACTTCTACAGGCAT 59.672 43.478 0.00 0.00 0.00 4.40
164 165 2.703536 TGACCAAGAACTTCTACAGGCA 59.296 45.455 0.00 0.00 0.00 4.75
165 166 3.402628 TGACCAAGAACTTCTACAGGC 57.597 47.619 0.00 0.00 0.00 4.85
166 167 7.118390 CACTAAATGACCAAGAACTTCTACAGG 59.882 40.741 0.00 0.00 0.00 4.00
167 168 7.118390 CCACTAAATGACCAAGAACTTCTACAG 59.882 40.741 0.00 0.00 0.00 2.74
168 169 6.934645 CCACTAAATGACCAAGAACTTCTACA 59.065 38.462 0.00 0.00 0.00 2.74
169 170 6.935208 ACCACTAAATGACCAAGAACTTCTAC 59.065 38.462 0.00 0.00 0.00 2.59
170 171 7.074653 ACCACTAAATGACCAAGAACTTCTA 57.925 36.000 0.00 0.00 0.00 2.10
171 172 5.941788 ACCACTAAATGACCAAGAACTTCT 58.058 37.500 0.00 0.00 0.00 2.85
172 173 5.763204 TGACCACTAAATGACCAAGAACTTC 59.237 40.000 0.00 0.00 0.00 3.01
173 174 5.690865 TGACCACTAAATGACCAAGAACTT 58.309 37.500 0.00 0.00 0.00 2.66
174 175 5.304686 TGACCACTAAATGACCAAGAACT 57.695 39.130 0.00 0.00 0.00 3.01
175 176 5.619981 GCATGACCACTAAATGACCAAGAAC 60.620 44.000 0.00 0.00 0.00 3.01
176 177 4.458989 GCATGACCACTAAATGACCAAGAA 59.541 41.667 0.00 0.00 0.00 2.52
177 178 4.009675 GCATGACCACTAAATGACCAAGA 58.990 43.478 0.00 0.00 0.00 3.02
178 179 3.758023 TGCATGACCACTAAATGACCAAG 59.242 43.478 0.00 0.00 0.00 3.61
179 180 3.760738 TGCATGACCACTAAATGACCAA 58.239 40.909 0.00 0.00 0.00 3.67
180 181 3.431673 TGCATGACCACTAAATGACCA 57.568 42.857 0.00 0.00 0.00 4.02
181 182 3.489738 GCATGCATGACCACTAAATGACC 60.490 47.826 30.64 3.15 0.00 4.02
182 183 3.129113 TGCATGCATGACCACTAAATGAC 59.871 43.478 30.64 7.94 0.00 3.06
183 184 3.354467 TGCATGCATGACCACTAAATGA 58.646 40.909 30.64 0.01 0.00 2.57
184 185 3.786516 TGCATGCATGACCACTAAATG 57.213 42.857 30.64 0.46 0.00 2.32
196 197 4.646040 ACTAATTACACCACATGCATGCAT 59.354 37.500 27.46 27.46 37.08 3.96
197 198 4.015764 ACTAATTACACCACATGCATGCA 58.984 39.130 26.53 25.04 0.00 3.96
198 199 4.142403 ACACTAATTACACCACATGCATGC 60.142 41.667 26.53 11.82 0.00 4.06
199 200 5.565592 ACACTAATTACACCACATGCATG 57.434 39.130 25.09 25.09 0.00 4.06
200 201 6.202762 CGATACACTAATTACACCACATGCAT 59.797 38.462 0.00 0.00 0.00 3.96
201 202 5.522097 CGATACACTAATTACACCACATGCA 59.478 40.000 0.00 0.00 0.00 3.96
202 203 5.050363 CCGATACACTAATTACACCACATGC 60.050 44.000 0.00 0.00 0.00 4.06
203 204 6.046593 ACCGATACACTAATTACACCACATG 58.953 40.000 0.00 0.00 0.00 3.21
204 205 6.229936 ACCGATACACTAATTACACCACAT 57.770 37.500 0.00 0.00 0.00 3.21
205 206 5.664294 ACCGATACACTAATTACACCACA 57.336 39.130 0.00 0.00 0.00 4.17
206 207 8.352201 TGTATACCGATACACTAATTACACCAC 58.648 37.037 0.00 0.00 42.45 4.16
207 208 8.462589 TGTATACCGATACACTAATTACACCA 57.537 34.615 0.00 0.00 42.45 4.17
219 220 8.905850 TCTCATAAAGTTGTGTATACCGATACA 58.094 33.333 0.00 0.00 44.60 2.29
220 221 9.740239 TTCTCATAAAGTTGTGTATACCGATAC 57.260 33.333 0.00 0.00 38.79 2.24
222 223 9.661563 TTTTCTCATAAAGTTGTGTATACCGAT 57.338 29.630 0.00 0.00 0.00 4.18
223 224 9.491675 TTTTTCTCATAAAGTTGTGTATACCGA 57.508 29.630 0.00 0.00 0.00 4.69
224 225 9.537848 GTTTTTCTCATAAAGTTGTGTATACCG 57.462 33.333 0.00 0.00 0.00 4.02
225 226 9.537848 CGTTTTTCTCATAAAGTTGTGTATACC 57.462 33.333 0.00 0.00 0.00 2.73
228 229 9.268268 TCTCGTTTTTCTCATAAAGTTGTGTAT 57.732 29.630 0.00 0.00 0.00 2.29
229 230 8.651391 TCTCGTTTTTCTCATAAAGTTGTGTA 57.349 30.769 0.00 0.00 0.00 2.90
230 231 7.280205 ACTCTCGTTTTTCTCATAAAGTTGTGT 59.720 33.333 0.00 0.00 0.00 3.72
231 232 7.630924 ACTCTCGTTTTTCTCATAAAGTTGTG 58.369 34.615 0.00 0.00 0.00 3.33
232 233 7.787725 ACTCTCGTTTTTCTCATAAAGTTGT 57.212 32.000 0.00 0.00 0.00 3.32
233 234 8.979574 AGTACTCTCGTTTTTCTCATAAAGTTG 58.020 33.333 0.00 0.00 0.00 3.16
240 241 9.360093 CTCAATTAGTACTCTCGTTTTTCTCAT 57.640 33.333 0.00 0.00 0.00 2.90
241 242 8.358148 ACTCAATTAGTACTCTCGTTTTTCTCA 58.642 33.333 0.00 0.00 36.36 3.27
242 243 8.745464 ACTCAATTAGTACTCTCGTTTTTCTC 57.255 34.615 0.00 0.00 36.36 2.87
256 257 7.979444 AGCTTGCAAAAGTACTCAATTAGTA 57.021 32.000 0.00 0.00 39.80 1.82
257 258 6.884280 AGCTTGCAAAAGTACTCAATTAGT 57.116 33.333 0.00 0.00 42.62 2.24
258 259 6.955963 CGTAGCTTGCAAAAGTACTCAATTAG 59.044 38.462 0.00 0.00 0.00 1.73
259 260 6.647481 TCGTAGCTTGCAAAAGTACTCAATTA 59.353 34.615 0.00 0.00 0.00 1.40
260 261 5.468746 TCGTAGCTTGCAAAAGTACTCAATT 59.531 36.000 0.00 0.00 0.00 2.32
261 262 4.994852 TCGTAGCTTGCAAAAGTACTCAAT 59.005 37.500 0.00 0.00 0.00 2.57
262 263 4.373527 TCGTAGCTTGCAAAAGTACTCAA 58.626 39.130 0.00 0.00 0.00 3.02
263 264 3.985008 TCGTAGCTTGCAAAAGTACTCA 58.015 40.909 0.00 0.00 0.00 3.41
264 265 4.985044 TTCGTAGCTTGCAAAAGTACTC 57.015 40.909 0.00 0.00 0.00 2.59
265 266 5.941948 ATTTCGTAGCTTGCAAAAGTACT 57.058 34.783 0.00 0.00 0.00 2.73
266 267 8.669394 ATTAATTTCGTAGCTTGCAAAAGTAC 57.331 30.769 0.00 1.69 0.00 2.73
267 268 9.685828 AAATTAATTTCGTAGCTTGCAAAAGTA 57.314 25.926 7.64 0.00 0.00 2.24
268 269 8.587952 AAATTAATTTCGTAGCTTGCAAAAGT 57.412 26.923 7.64 0.00 0.00 2.66
269 270 8.698854 TGAAATTAATTTCGTAGCTTGCAAAAG 58.301 29.630 27.49 0.00 46.92 2.27
270 271 8.484008 GTGAAATTAATTTCGTAGCTTGCAAAA 58.516 29.630 27.49 9.57 46.92 2.44
271 272 7.115663 GGTGAAATTAATTTCGTAGCTTGCAAA 59.884 33.333 27.49 9.73 46.92 3.68
272 273 6.584563 GGTGAAATTAATTTCGTAGCTTGCAA 59.415 34.615 27.49 10.14 46.92 4.08
273 274 6.090129 GGTGAAATTAATTTCGTAGCTTGCA 58.910 36.000 27.49 11.23 46.92 4.08
274 275 6.090129 TGGTGAAATTAATTTCGTAGCTTGC 58.910 36.000 27.49 13.98 46.92 4.01
275 276 8.687824 AATGGTGAAATTAATTTCGTAGCTTG 57.312 30.769 27.49 0.00 46.92 4.01
276 277 8.519526 TGAATGGTGAAATTAATTTCGTAGCTT 58.480 29.630 27.49 19.11 46.92 3.74
277 278 8.050778 TGAATGGTGAAATTAATTTCGTAGCT 57.949 30.769 27.49 16.26 46.92 3.32
278 279 8.856490 ATGAATGGTGAAATTAATTTCGTAGC 57.144 30.769 27.49 22.10 46.92 3.58
281 282 9.874205 AATGATGAATGGTGAAATTAATTTCGT 57.126 25.926 27.49 15.38 46.92 3.85
289 290 8.042515 CCAAGGTAAATGATGAATGGTGAAATT 58.957 33.333 0.00 0.00 0.00 1.82
290 291 7.180766 ACCAAGGTAAATGATGAATGGTGAAAT 59.819 33.333 0.00 0.00 38.44 2.17
291 292 6.496565 ACCAAGGTAAATGATGAATGGTGAAA 59.503 34.615 0.00 0.00 38.44 2.69
292 293 6.015918 ACCAAGGTAAATGATGAATGGTGAA 58.984 36.000 0.00 0.00 38.44 3.18
293 294 5.579047 ACCAAGGTAAATGATGAATGGTGA 58.421 37.500 0.00 0.00 38.44 4.02
294 295 5.920193 ACCAAGGTAAATGATGAATGGTG 57.080 39.130 0.00 0.00 38.44 4.17
295 296 6.015918 TCAACCAAGGTAAATGATGAATGGT 58.984 36.000 0.00 0.00 41.46 3.55
296 297 6.528537 TCAACCAAGGTAAATGATGAATGG 57.471 37.500 0.00 0.00 0.00 3.16
297 298 7.829725 TCTTCAACCAAGGTAAATGATGAATG 58.170 34.615 0.00 0.00 32.22 2.67
298 299 7.890127 TCTCTTCAACCAAGGTAAATGATGAAT 59.110 33.333 8.46 0.00 32.22 2.57
299 300 7.230747 TCTCTTCAACCAAGGTAAATGATGAA 58.769 34.615 8.46 5.86 32.22 2.57
300 301 6.778821 TCTCTTCAACCAAGGTAAATGATGA 58.221 36.000 0.00 0.65 32.22 2.92
301 302 7.636150 ATCTCTTCAACCAAGGTAAATGATG 57.364 36.000 0.00 0.00 32.22 3.07
302 303 8.655935 AAATCTCTTCAACCAAGGTAAATGAT 57.344 30.769 0.00 0.00 32.22 2.45
303 304 7.176690 GGAAATCTCTTCAACCAAGGTAAATGA 59.823 37.037 0.00 0.00 32.22 2.57
304 305 7.039784 TGGAAATCTCTTCAACCAAGGTAAATG 60.040 37.037 0.00 0.00 32.22 2.32
305 306 7.010160 TGGAAATCTCTTCAACCAAGGTAAAT 58.990 34.615 0.00 0.00 32.22 1.40
306 307 6.369629 TGGAAATCTCTTCAACCAAGGTAAA 58.630 36.000 0.00 0.00 32.22 2.01
307 308 5.947663 TGGAAATCTCTTCAACCAAGGTAA 58.052 37.500 0.00 0.00 32.22 2.85
308 309 5.576563 TGGAAATCTCTTCAACCAAGGTA 57.423 39.130 0.00 0.00 32.22 3.08
309 310 4.453480 TGGAAATCTCTTCAACCAAGGT 57.547 40.909 0.00 0.00 32.22 3.50
310 311 5.789643 TTTGGAAATCTCTTCAACCAAGG 57.210 39.130 0.00 0.00 38.37 3.61
311 312 9.415544 CTTAATTTGGAAATCTCTTCAACCAAG 57.584 33.333 0.00 0.00 38.37 3.61
312 313 7.872483 GCTTAATTTGGAAATCTCTTCAACCAA 59.128 33.333 0.00 0.00 35.95 3.67
313 314 7.378181 GCTTAATTTGGAAATCTCTTCAACCA 58.622 34.615 0.00 0.00 0.00 3.67
314 315 6.813649 GGCTTAATTTGGAAATCTCTTCAACC 59.186 38.462 0.00 0.00 0.00 3.77
315 316 6.813649 GGGCTTAATTTGGAAATCTCTTCAAC 59.186 38.462 0.00 0.00 0.00 3.18
316 317 6.725834 AGGGCTTAATTTGGAAATCTCTTCAA 59.274 34.615 0.00 0.00 0.00 2.69
317 318 6.256053 AGGGCTTAATTTGGAAATCTCTTCA 58.744 36.000 0.00 0.00 0.00 3.02
318 319 6.782082 AGGGCTTAATTTGGAAATCTCTTC 57.218 37.500 0.00 0.00 0.00 2.87
319 320 9.936329 TTATAGGGCTTAATTTGGAAATCTCTT 57.064 29.630 0.00 0.00 0.00 2.85
320 321 9.936329 TTTATAGGGCTTAATTTGGAAATCTCT 57.064 29.630 0.00 0.00 0.00 3.10
321 322 9.967346 GTTTATAGGGCTTAATTTGGAAATCTC 57.033 33.333 0.00 0.00 0.00 2.75
322 323 8.924303 GGTTTATAGGGCTTAATTTGGAAATCT 58.076 33.333 0.00 0.00 0.00 2.40
323 324 7.865889 CGGTTTATAGGGCTTAATTTGGAAATC 59.134 37.037 0.00 0.00 0.00 2.17
324 325 7.562088 TCGGTTTATAGGGCTTAATTTGGAAAT 59.438 33.333 0.00 0.00 0.00 2.17
325 326 6.890814 TCGGTTTATAGGGCTTAATTTGGAAA 59.109 34.615 0.00 0.00 0.00 3.13
326 327 6.424883 TCGGTTTATAGGGCTTAATTTGGAA 58.575 36.000 0.00 0.00 0.00 3.53
327 328 6.003859 TCGGTTTATAGGGCTTAATTTGGA 57.996 37.500 0.00 0.00 0.00 3.53
328 329 6.702716 TTCGGTTTATAGGGCTTAATTTGG 57.297 37.500 0.00 0.00 0.00 3.28
329 330 8.463607 TCTTTTCGGTTTATAGGGCTTAATTTG 58.536 33.333 0.00 0.00 0.00 2.32
330 331 8.584063 TCTTTTCGGTTTATAGGGCTTAATTT 57.416 30.769 0.00 0.00 0.00 1.82
331 332 8.584063 TTCTTTTCGGTTTATAGGGCTTAATT 57.416 30.769 0.00 0.00 0.00 1.40
332 333 7.284716 CCTTCTTTTCGGTTTATAGGGCTTAAT 59.715 37.037 0.00 0.00 0.00 1.40
333 334 6.600427 CCTTCTTTTCGGTTTATAGGGCTTAA 59.400 38.462 0.00 0.00 0.00 1.85
334 335 6.117488 CCTTCTTTTCGGTTTATAGGGCTTA 58.883 40.000 0.00 0.00 0.00 3.09
335 336 4.948004 CCTTCTTTTCGGTTTATAGGGCTT 59.052 41.667 0.00 0.00 0.00 4.35
336 337 4.524053 CCTTCTTTTCGGTTTATAGGGCT 58.476 43.478 0.00 0.00 0.00 5.19
337 338 3.630769 CCCTTCTTTTCGGTTTATAGGGC 59.369 47.826 0.00 0.00 35.11 5.19
338 339 5.106876 TCCCTTCTTTTCGGTTTATAGGG 57.893 43.478 0.00 0.00 41.98 3.53
339 340 5.742063 ACTCCCTTCTTTTCGGTTTATAGG 58.258 41.667 0.00 0.00 0.00 2.57
344 345 9.916360 ATTAATATACTCCCTTCTTTTCGGTTT 57.084 29.630 0.00 0.00 0.00 3.27
345 346 9.916360 AATTAATATACTCCCTTCTTTTCGGTT 57.084 29.630 0.00 0.00 0.00 4.44
356 357 9.041354 CCTCTCTGCTTAATTAATATACTCCCT 57.959 37.037 0.00 0.00 0.00 4.20
357 358 9.036980 TCCTCTCTGCTTAATTAATATACTCCC 57.963 37.037 0.00 0.00 0.00 4.30
364 365 9.823647 CAAACTCTCCTCTCTGCTTAATTAATA 57.176 33.333 0.00 0.00 0.00 0.98
365 366 8.325046 ACAAACTCTCCTCTCTGCTTAATTAAT 58.675 33.333 0.00 0.00 0.00 1.40
366 367 7.680730 ACAAACTCTCCTCTCTGCTTAATTAA 58.319 34.615 0.00 0.00 0.00 1.40
367 368 7.246171 ACAAACTCTCCTCTCTGCTTAATTA 57.754 36.000 0.00 0.00 0.00 1.40
368 369 6.120507 ACAAACTCTCCTCTCTGCTTAATT 57.879 37.500 0.00 0.00 0.00 1.40
369 370 5.753721 ACAAACTCTCCTCTCTGCTTAAT 57.246 39.130 0.00 0.00 0.00 1.40
370 371 5.552870 AACAAACTCTCCTCTCTGCTTAA 57.447 39.130 0.00 0.00 0.00 1.85
371 372 5.538813 TGTAACAAACTCTCCTCTCTGCTTA 59.461 40.000 0.00 0.00 0.00 3.09
372 373 4.345257 TGTAACAAACTCTCCTCTCTGCTT 59.655 41.667 0.00 0.00 0.00 3.91
373 374 3.898123 TGTAACAAACTCTCCTCTCTGCT 59.102 43.478 0.00 0.00 0.00 4.24
374 375 4.258702 TGTAACAAACTCTCCTCTCTGC 57.741 45.455 0.00 0.00 0.00 4.26
375 376 7.757624 GTCTATTGTAACAAACTCTCCTCTCTG 59.242 40.741 0.00 0.00 0.00 3.35
376 377 7.093684 GGTCTATTGTAACAAACTCTCCTCTCT 60.094 40.741 0.00 0.00 0.00 3.10
377 378 7.036829 GGTCTATTGTAACAAACTCTCCTCTC 58.963 42.308 0.00 0.00 0.00 3.20
378 379 6.070710 GGGTCTATTGTAACAAACTCTCCTCT 60.071 42.308 0.00 0.00 0.00 3.69
379 380 6.107343 GGGTCTATTGTAACAAACTCTCCTC 58.893 44.000 0.00 0.00 0.00 3.71
380 381 5.045797 GGGGTCTATTGTAACAAACTCTCCT 60.046 44.000 0.00 0.00 0.00 3.69
381 382 5.045797 AGGGGTCTATTGTAACAAACTCTCC 60.046 44.000 0.00 0.00 0.00 3.71
382 383 6.051179 AGGGGTCTATTGTAACAAACTCTC 57.949 41.667 0.00 0.00 0.00 3.20
383 384 6.449830 AAGGGGTCTATTGTAACAAACTCT 57.550 37.500 0.00 0.00 0.00 3.24
384 385 7.118825 GTGTAAGGGGTCTATTGTAACAAACTC 59.881 40.741 0.00 0.00 0.00 3.01
385 386 6.938596 GTGTAAGGGGTCTATTGTAACAAACT 59.061 38.462 0.00 0.00 0.00 2.66
386 387 6.711645 TGTGTAAGGGGTCTATTGTAACAAAC 59.288 38.462 0.00 0.00 0.00 2.93
387 388 6.839454 TGTGTAAGGGGTCTATTGTAACAAA 58.161 36.000 0.00 0.00 0.00 2.83
388 389 6.436738 TGTGTAAGGGGTCTATTGTAACAA 57.563 37.500 0.00 0.00 0.00 2.83
389 390 5.570034 GCTGTGTAAGGGGTCTATTGTAACA 60.570 44.000 0.00 0.00 0.00 2.41
390 391 4.874396 GCTGTGTAAGGGGTCTATTGTAAC 59.126 45.833 0.00 0.00 0.00 2.50
391 392 4.532916 TGCTGTGTAAGGGGTCTATTGTAA 59.467 41.667 0.00 0.00 0.00 2.41
392 393 4.098155 TGCTGTGTAAGGGGTCTATTGTA 58.902 43.478 0.00 0.00 0.00 2.41
393 394 2.910319 TGCTGTGTAAGGGGTCTATTGT 59.090 45.455 0.00 0.00 0.00 2.71
394 395 3.197766 TCTGCTGTGTAAGGGGTCTATTG 59.802 47.826 0.00 0.00 0.00 1.90
395 396 3.450904 TCTGCTGTGTAAGGGGTCTATT 58.549 45.455 0.00 0.00 0.00 1.73
396 397 3.034635 CTCTGCTGTGTAAGGGGTCTAT 58.965 50.000 0.00 0.00 0.00 1.98
397 398 2.042569 TCTCTGCTGTGTAAGGGGTCTA 59.957 50.000 0.00 0.00 0.00 2.59
398 399 1.203187 TCTCTGCTGTGTAAGGGGTCT 60.203 52.381 0.00 0.00 0.00 3.85
399 400 1.205893 CTCTCTGCTGTGTAAGGGGTC 59.794 57.143 0.00 0.00 0.00 4.46
400 401 1.270907 CTCTCTGCTGTGTAAGGGGT 58.729 55.000 0.00 0.00 0.00 4.95
401 402 0.539051 CCTCTCTGCTGTGTAAGGGG 59.461 60.000 0.00 0.00 0.00 4.79
402 403 1.480137 CTCCTCTCTGCTGTGTAAGGG 59.520 57.143 0.00 0.00 0.00 3.95
403 404 2.426738 CTCTCCTCTCTGCTGTGTAAGG 59.573 54.545 0.00 0.00 0.00 2.69
404 405 3.088532 ACTCTCCTCTCTGCTGTGTAAG 58.911 50.000 0.00 0.00 0.00 2.34
405 406 2.822561 CACTCTCCTCTCTGCTGTGTAA 59.177 50.000 0.00 0.00 0.00 2.41
406 407 2.441410 CACTCTCCTCTCTGCTGTGTA 58.559 52.381 0.00 0.00 0.00 2.90
407 408 1.255882 CACTCTCCTCTCTGCTGTGT 58.744 55.000 0.00 0.00 0.00 3.72
408 409 0.108709 GCACTCTCCTCTCTGCTGTG 60.109 60.000 0.00 0.00 0.00 3.66
409 410 0.541530 TGCACTCTCCTCTCTGCTGT 60.542 55.000 0.00 0.00 0.00 4.40
410 411 0.825410 ATGCACTCTCCTCTCTGCTG 59.175 55.000 0.00 0.00 0.00 4.41
411 412 1.570803 AATGCACTCTCCTCTCTGCT 58.429 50.000 0.00 0.00 0.00 4.24
412 413 3.533606 TTAATGCACTCTCCTCTCTGC 57.466 47.619 0.00 0.00 0.00 4.26
521 531 2.843730 TGGCTGGTGTAGTGGTATGAAT 59.156 45.455 0.00 0.00 0.00 2.57
522 532 2.261729 TGGCTGGTGTAGTGGTATGAA 58.738 47.619 0.00 0.00 0.00 2.57
523 533 1.945580 TGGCTGGTGTAGTGGTATGA 58.054 50.000 0.00 0.00 0.00 2.15
524 534 2.092968 ACATGGCTGGTGTAGTGGTATG 60.093 50.000 0.00 0.00 0.00 2.39
525 535 2.196595 ACATGGCTGGTGTAGTGGTAT 58.803 47.619 0.00 0.00 0.00 2.73
526 536 1.651737 ACATGGCTGGTGTAGTGGTA 58.348 50.000 0.00 0.00 0.00 3.25
527 537 0.771127 AACATGGCTGGTGTAGTGGT 59.229 50.000 0.00 0.00 0.00 4.16
528 538 1.541147 CAAACATGGCTGGTGTAGTGG 59.459 52.381 0.00 0.00 0.00 4.00
561 571 2.614829 ATACCCGTTAGCGAGCAAAT 57.385 45.000 0.00 0.00 41.33 2.32
568 582 4.868067 AGTTCAGAATATACCCGTTAGCG 58.132 43.478 0.00 0.00 37.95 4.26
571 585 6.549433 ACCAAGTTCAGAATATACCCGTTA 57.451 37.500 0.00 0.00 0.00 3.18
577 591 6.486993 GGGATCCAACCAAGTTCAGAATATAC 59.513 42.308 15.23 0.00 0.00 1.47
578 592 6.159575 TGGGATCCAACCAAGTTCAGAATATA 59.840 38.462 15.23 0.00 34.44 0.86
579 593 5.044179 TGGGATCCAACCAAGTTCAGAATAT 60.044 40.000 15.23 0.00 34.44 1.28
584 598 2.584835 TGGGATCCAACCAAGTTCAG 57.415 50.000 15.23 0.00 34.44 3.02
605 622 2.071778 TGCCCTGATTAATTGGCTCC 57.928 50.000 19.26 5.95 44.32 4.70
614 631 3.370840 AAAGAGCACATGCCCTGATTA 57.629 42.857 0.00 0.00 43.38 1.75
615 632 2.226962 AAAGAGCACATGCCCTGATT 57.773 45.000 0.00 0.00 43.38 2.57
616 633 2.226962 AAAAGAGCACATGCCCTGAT 57.773 45.000 0.00 0.00 43.38 2.90
617 634 1.999648 AAAAAGAGCACATGCCCTGA 58.000 45.000 0.00 0.00 43.38 3.86
627 648 7.231467 AGTTCCAATTAGGTCTAAAAAGAGCA 58.769 34.615 7.28 0.00 38.64 4.26
669 690 0.870307 CGTGATACGCGGGAGGAAAG 60.870 60.000 12.47 0.00 33.65 2.62
710 733 2.200337 GGCGGTGGAAGCAAAGGTT 61.200 57.895 0.00 0.00 36.08 3.50
773 800 4.525912 AAGCACATGAAAGGGACATTTC 57.474 40.909 0.00 2.76 39.22 2.17
938 968 1.302351 AGTGCTGCACAAGAGGCTC 60.302 57.895 31.90 6.34 36.74 4.70
985 1024 1.769465 AGGCATGAGCAGATCACTGAT 59.231 47.619 0.00 0.00 45.81 2.90
1013 1052 4.154347 CCGAGGAGCTGCTGTCCC 62.154 72.222 14.48 1.56 34.21 4.46
1015 1054 1.954362 ATGACCGAGGAGCTGCTGTC 61.954 60.000 14.48 15.45 0.00 3.51
1121 1160 3.071206 TGAGGACGAGGAGCCTGC 61.071 66.667 0.00 0.00 33.84 4.85
1218 1257 2.283824 GGCCTTGTCGAGGTCCTTA 58.716 57.895 8.01 0.00 44.87 2.69
1277 1316 0.248377 GTTACGATGGACGAGGACGG 60.248 60.000 0.00 0.00 45.77 4.79
1445 1487 3.289629 CGCACACATCGAGTAGCG 58.710 61.111 14.41 14.41 43.91 4.26
1449 1491 3.375642 CTTATCATCGCACACATCGAGT 58.624 45.455 0.00 0.00 39.47 4.18
1464 1506 3.862264 GCTCGCTGGTATCATGCTTATCA 60.862 47.826 0.00 0.00 0.00 2.15
1468 1510 0.533755 GGCTCGCTGGTATCATGCTT 60.534 55.000 0.00 0.00 0.00 3.91
1520 1562 0.321387 GAACTCCAAACCCTCGACCC 60.321 60.000 0.00 0.00 0.00 4.46
1640 1768 3.642755 CACTCGGTCAGTGCAACC 58.357 61.111 0.00 0.00 46.30 3.77
1662 1790 4.013050 CTCACCCAGCATCGATCTATCTA 58.987 47.826 0.00 0.00 0.00 1.98
1663 1791 2.824936 CTCACCCAGCATCGATCTATCT 59.175 50.000 0.00 0.00 0.00 1.98
1664 1792 2.822561 TCTCACCCAGCATCGATCTATC 59.177 50.000 0.00 0.00 0.00 2.08
1665 1793 2.560542 GTCTCACCCAGCATCGATCTAT 59.439 50.000 0.00 0.00 0.00 1.98
1770 1898 3.434641 CACCATATCCAATCGATGCAGAC 59.565 47.826 0.00 0.00 31.92 3.51
1802 1930 8.967218 TCGTAAACAACCGCTTTATATATGTAC 58.033 33.333 0.00 0.00 0.00 2.90
1854 1982 3.217626 CATGTCCCTAATCTTTCCCAGC 58.782 50.000 0.00 0.00 0.00 4.85
1858 1986 3.954258 CCAACCATGTCCCTAATCTTTCC 59.046 47.826 0.00 0.00 0.00 3.13
1963 2173 8.626526 ACTTTACGTGTTGGTTTATCAATCTTT 58.373 29.630 0.00 0.00 0.00 2.52
1967 2177 7.361457 GGCTACTTTACGTGTTGGTTTATCAAT 60.361 37.037 0.00 0.00 0.00 2.57
1973 2183 3.562557 CAGGCTACTTTACGTGTTGGTTT 59.437 43.478 0.00 0.00 0.00 3.27
1982 2192 7.577979 TCAATACAAAAACAGGCTACTTTACG 58.422 34.615 0.00 0.00 0.00 3.18
2001 2211 4.202151 GGCTTCCCAATGGTTGATCAATAC 60.202 45.833 12.12 8.66 0.00 1.89
2003 2213 2.767960 GGCTTCCCAATGGTTGATCAAT 59.232 45.455 12.12 0.00 0.00 2.57
2031 2241 4.546944 GCACATGCTTGGTTGGTTACCC 62.547 54.545 0.00 0.00 41.32 3.69
2034 2244 0.965439 GGCACATGCTTGGTTGGTTA 59.035 50.000 3.48 0.00 41.70 2.85
2147 2357 4.022503 ACTCCAAGTAGTAAACAGTCGACC 60.023 45.833 13.01 0.00 0.00 4.79
2150 2360 6.005583 TGTACTCCAAGTAGTAAACAGTCG 57.994 41.667 0.00 0.00 33.85 4.18
2202 2412 8.457238 AGAGAGATTAACTGGCAAATTAATCC 57.543 34.615 25.61 20.24 43.95 3.01
2213 2423 6.467677 TCCTGTTTTGAGAGAGATTAACTGG 58.532 40.000 0.00 0.00 36.51 4.00
2214 2424 8.558973 AATCCTGTTTTGAGAGAGATTAACTG 57.441 34.615 0.00 0.00 0.00 3.16
2215 2425 9.225436 GAAATCCTGTTTTGAGAGAGATTAACT 57.775 33.333 0.00 0.00 0.00 2.24
2261 2475 4.021104 TGGTTGTGTGAATTTGTTGGTTGA 60.021 37.500 0.00 0.00 0.00 3.18
2296 2510 8.950210 CCCAGCAGATAATTTTATATTCGATGT 58.050 33.333 0.00 0.00 0.00 3.06
2318 2532 1.336755 GTGTTTGTGTAGTTGCCCCAG 59.663 52.381 0.00 0.00 0.00 4.45
2324 2538 1.018148 TGGGCGTGTTTGTGTAGTTG 58.982 50.000 0.00 0.00 0.00 3.16
2328 2542 2.039818 TTCTTGGGCGTGTTTGTGTA 57.960 45.000 0.00 0.00 0.00 2.90
2386 2602 2.344950 CGCAGATCACTTGAGCTTCTT 58.655 47.619 0.00 0.00 38.98 2.52
2392 2608 1.129998 CTTTGCCGCAGATCACTTGAG 59.870 52.381 0.00 0.00 0.00 3.02
2454 2670 1.379044 GGGATGGTGACCAGCTTGG 60.379 63.158 20.23 1.16 40.16 3.61
2476 2692 0.820871 CTGGCACCCAGTCTCTAGAC 59.179 60.000 1.72 1.72 45.82 2.59
2486 2702 1.073025 CTTGTAGCACTGGCACCCA 59.927 57.895 0.00 0.00 44.61 4.51
2500 2716 7.772757 ACTCTCTCTTCAAATTCACTTTCTTGT 59.227 33.333 0.00 0.00 0.00 3.16
2509 2725 5.555017 CCTCCAACTCTCTCTTCAAATTCA 58.445 41.667 0.00 0.00 0.00 2.57
2527 2746 3.392616 GATCTTTCTTAGATGGGCCTCCA 59.607 47.826 4.53 0.00 43.75 3.86
2528 2747 3.244735 GGATCTTTCTTAGATGGGCCTCC 60.245 52.174 4.53 0.00 43.75 4.30
2530 2749 2.370189 CGGATCTTTCTTAGATGGGCCT 59.630 50.000 4.53 0.00 43.75 5.19
2531 2750 2.772287 CGGATCTTTCTTAGATGGGCC 58.228 52.381 0.00 0.00 43.75 5.80
2532 2751 2.147150 GCGGATCTTTCTTAGATGGGC 58.853 52.381 0.00 0.00 43.75 5.36
2534 2753 4.327982 TGAGCGGATCTTTCTTAGATGG 57.672 45.455 0.00 0.00 43.75 3.51
2536 2755 5.988561 GTGATTGAGCGGATCTTTCTTAGAT 59.011 40.000 0.00 0.00 46.41 1.98
2537 2756 5.352284 GTGATTGAGCGGATCTTTCTTAGA 58.648 41.667 0.00 0.00 37.28 2.10
2538 2757 4.509600 GGTGATTGAGCGGATCTTTCTTAG 59.490 45.833 0.00 0.00 0.00 2.18
2539 2758 4.081142 TGGTGATTGAGCGGATCTTTCTTA 60.081 41.667 0.00 0.00 0.00 2.10
2570 2789 5.816449 TTCATTGCATGTGTATGATTCGT 57.184 34.783 0.00 0.00 36.36 3.85
2577 2796 7.327518 CGCATCATAAATTCATTGCATGTGTAT 59.672 33.333 0.00 0.00 0.00 2.29
2579 2798 5.460748 CGCATCATAAATTCATTGCATGTGT 59.539 36.000 0.00 0.00 0.00 3.72
2586 2805 8.834212 CGATTAACTCGCATCATAAATTCATTG 58.166 33.333 0.00 0.00 41.14 2.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.