Multiple sequence alignment - TraesCS5D01G301100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G301100 chr5D 100.000 2564 0 0 1 2564 398199773 398202336 0.000000e+00 4735.0
1 TraesCS5D01G301100 chr5D 90.711 1701 108 20 54 1726 398304147 398305825 0.000000e+00 2220.0
2 TraesCS5D01G301100 chr5D 80.976 615 99 12 790 1392 398426372 398426980 2.990000e-129 472.0
3 TraesCS5D01G301100 chr5D 80.405 444 68 12 528 967 398453238 398453666 1.140000e-83 320.0
4 TraesCS5D01G301100 chr5D 78.590 383 46 24 104 467 398452847 398453212 1.190000e-53 220.0
5 TraesCS5D01G301100 chr5D 76.894 264 47 10 1752 2005 545628264 545628523 1.240000e-28 137.0
6 TraesCS5D01G301100 chr5B 92.547 1704 90 20 54 1726 478328167 478329864 0.000000e+00 2409.0
7 TraesCS5D01G301100 chr5B 79.877 1138 158 45 124 1229 478373598 478374696 0.000000e+00 767.0
8 TraesCS5D01G301100 chr5B 85.027 374 41 8 562 933 478411183 478411543 1.450000e-97 366.0
9 TraesCS5D01G301100 chr5B 79.564 367 40 22 1280 1612 478374707 478375072 1.980000e-56 230.0
10 TraesCS5D01G301100 chr5B 97.059 34 0 1 2531 2564 701943756 701943788 3.560000e-04 56.5
11 TraesCS5D01G301100 chr5B 97.059 34 0 1 2531 2564 701987330 701987362 3.560000e-04 56.5
12 TraesCS5D01G301100 chr5B 97.059 34 0 1 2531 2564 702031933 702031965 3.560000e-04 56.5
13 TraesCS5D01G301100 chr5B 97.059 34 0 1 2531 2564 702085185 702085217 3.560000e-04 56.5
14 TraesCS5D01G301100 chr5B 96.875 32 0 1 2377 2408 665812405 665812435 5.000000e-03 52.8
15 TraesCS5D01G301100 chr5A 89.229 1764 139 28 1 1726 503324895 503326645 0.000000e+00 2158.0
16 TraesCS5D01G301100 chr5A 92.256 1033 55 10 54 1072 503255567 503256588 0.000000e+00 1441.0
17 TraesCS5D01G301100 chr5A 96.970 33 0 1 2377 2408 169297917 169297885 1.000000e-03 54.7
18 TraesCS5D01G301100 chr5A 96.875 32 0 1 2377 2408 656937765 656937795 5.000000e-03 52.8
19 TraesCS5D01G301100 chrUn 83.505 291 39 7 1734 2016 119816194 119815905 1.960000e-66 263.0
20 TraesCS5D01G301100 chr3A 83.562 292 37 9 1733 2016 319954129 319953841 1.960000e-66 263.0
21 TraesCS5D01G301100 chr4A 81.849 292 41 7 1736 2016 43674278 43673988 4.270000e-58 235.0
22 TraesCS5D01G301100 chr1B 78.136 279 45 7 1736 2013 3703113 3703376 2.040000e-36 163.0
23 TraesCS5D01G301100 chr1D 95.000 40 1 1 2376 2415 211633438 211633476 7.660000e-06 62.1
24 TraesCS5D01G301100 chr4D 100.000 31 0 0 2379 2409 366328277 366328247 9.910000e-05 58.4
25 TraesCS5D01G301100 chr6D 100.000 30 0 0 2373 2402 459038850 459038821 3.560000e-04 56.5
26 TraesCS5D01G301100 chr3D 96.875 32 1 0 2375 2406 105707872 105707841 1.000000e-03 54.7
27 TraesCS5D01G301100 chr2B 100.000 29 0 0 2380 2408 777557783 777557811 1.000000e-03 54.7
28 TraesCS5D01G301100 chr7A 100.000 28 0 0 2537 2564 105927690 105927663 5.000000e-03 52.8
29 TraesCS5D01G301100 chr1A 94.118 34 2 0 2382 2415 479543097 479543064 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G301100 chr5D 398199773 398202336 2563 False 4735.0 4735 100.0000 1 2564 1 chr5D.!!$F1 2563
1 TraesCS5D01G301100 chr5D 398304147 398305825 1678 False 2220.0 2220 90.7110 54 1726 1 chr5D.!!$F2 1672
2 TraesCS5D01G301100 chr5D 398426372 398426980 608 False 472.0 472 80.9760 790 1392 1 chr5D.!!$F3 602
3 TraesCS5D01G301100 chr5D 398452847 398453666 819 False 270.0 320 79.4975 104 967 2 chr5D.!!$F5 863
4 TraesCS5D01G301100 chr5B 478328167 478329864 1697 False 2409.0 2409 92.5470 54 1726 1 chr5B.!!$F1 1672
5 TraesCS5D01G301100 chr5B 478373598 478375072 1474 False 498.5 767 79.7205 124 1612 2 chr5B.!!$F8 1488
6 TraesCS5D01G301100 chr5A 503324895 503326645 1750 False 2158.0 2158 89.2290 1 1726 1 chr5A.!!$F2 1725
7 TraesCS5D01G301100 chr5A 503255567 503256588 1021 False 1441.0 1441 92.2560 54 1072 1 chr5A.!!$F1 1018

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
596 638 0.251341 ACCTTGGGGCATGTGTCTTC 60.251 55.0 0.0 0.0 35.63 2.87 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1988 2093 0.034059 ATGATCTTGGATCGGGCGAC 59.966 55.0 0.0 0.0 0.0 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.214191 TCCATGCACAACTTTAACAGAAAA 57.786 33.333 0.00 0.00 0.00 2.29
64 67 4.276183 TCTTCGACCAGAATCTTCCGATAG 59.724 45.833 0.00 0.00 38.34 2.08
95 98 0.454957 CTGCTGCAAAAACGATCCGG 60.455 55.000 3.02 0.00 0.00 5.14
136 142 3.192422 CCACGAAAATCCTGCCAATGTTA 59.808 43.478 0.00 0.00 0.00 2.41
349 373 6.197096 GCAGACAATTAATTAATCTTGGCGTG 59.803 38.462 11.08 10.31 0.00 5.34
520 562 2.548067 CCAACCCATCATCGGCTACTAC 60.548 54.545 0.00 0.00 0.00 2.73
521 563 1.339097 ACCCATCATCGGCTACTACC 58.661 55.000 0.00 0.00 0.00 3.18
596 638 0.251341 ACCTTGGGGCATGTGTCTTC 60.251 55.000 0.00 0.00 35.63 2.87
632 675 8.112183 AGTGGAATACTTTCTCCATTTCATTCT 58.888 33.333 0.00 0.00 43.52 2.40
719 764 4.378774 TCCACATGCCAAATTGTTTTCTG 58.621 39.130 0.00 0.00 0.00 3.02
784 833 2.645838 TCATATGCTTTGGGAGAGCC 57.354 50.000 0.00 0.00 39.38 4.70
860 919 5.921408 GCCGAGTTCCTGACTATAAATACAG 59.079 44.000 0.00 0.00 39.19 2.74
917 976 2.570752 ACATCTTGCCTCATCTCAGTGT 59.429 45.455 0.00 0.00 0.00 3.55
971 1033 6.215636 AGAACCCTACTTGTTGTCCTTGATAT 59.784 38.462 0.00 0.00 0.00 1.63
989 1051 0.698238 ATGCAGTTTGGCCACCTCTA 59.302 50.000 3.88 0.00 0.00 2.43
1401 1483 0.716108 GCGAGGTTGACGACAATGAG 59.284 55.000 3.18 0.00 38.32 2.90
1404 1486 2.609491 CGAGGTTGACGACAATGAGGAA 60.609 50.000 3.18 0.00 38.32 3.36
1418 1521 1.139654 TGAGGAAGATGGCGATGAAGG 59.860 52.381 0.00 0.00 0.00 3.46
1467 1570 2.901192 TGTAATCCGGAACCACAGAGAA 59.099 45.455 9.01 0.00 0.00 2.87
1495 1598 2.350772 GGTTTGGAGTTCAGCATTGACG 60.351 50.000 0.00 0.00 31.71 4.35
1496 1599 1.522668 TTGGAGTTCAGCATTGACGG 58.477 50.000 0.00 0.00 31.71 4.79
1497 1600 0.396435 TGGAGTTCAGCATTGACGGT 59.604 50.000 0.00 0.00 31.71 4.83
1515 1618 1.407851 GGTGAGATTGATCAGGCTGCA 60.408 52.381 10.34 0.00 0.00 4.41
1530 1633 2.551459 GGCTGCAGATATGTTCATCACC 59.449 50.000 20.43 0.00 0.00 4.02
1605 1708 7.944729 ATCTATCTGTTTGTATGGCAAAGTT 57.055 32.000 0.00 0.00 46.50 2.66
1621 1724 5.220529 GGCAAAGTTTGAAGCGTACGTATAT 60.221 40.000 19.82 0.33 0.00 0.86
1625 1728 4.966366 AGTTTGAAGCGTACGTATATCGAC 59.034 41.667 17.90 11.72 42.86 4.20
1649 1752 3.396260 TCGGCTGCAAATATAGGTACC 57.604 47.619 2.73 2.73 0.00 3.34
1689 1793 7.378995 GTGAGCTAGACTTGTATACCGTATTTG 59.621 40.741 0.00 0.00 0.00 2.32
1690 1794 7.067859 TGAGCTAGACTTGTATACCGTATTTGT 59.932 37.037 0.00 0.00 0.00 2.83
1702 1807 7.854557 ATACCGTATTTGTTAGGGAGAAAAC 57.145 36.000 0.00 0.00 37.96 2.43
1713 1818 2.028020 AGGGAGAAAACGAGATGGACAC 60.028 50.000 0.00 0.00 0.00 3.67
1727 1832 4.063529 ACACATGTTGTCTGCCCG 57.936 55.556 0.00 0.00 29.79 6.13
1728 1833 1.600636 ACACATGTTGTCTGCCCGG 60.601 57.895 0.00 0.00 29.79 5.73
1729 1834 2.034066 ACATGTTGTCTGCCCGGG 59.966 61.111 19.09 19.09 0.00 5.73
1730 1835 2.350895 CATGTTGTCTGCCCGGGA 59.649 61.111 29.31 8.79 0.00 5.14
1731 1836 1.077501 CATGTTGTCTGCCCGGGAT 60.078 57.895 29.31 2.07 0.00 3.85
1732 1837 0.680921 CATGTTGTCTGCCCGGGATT 60.681 55.000 29.31 0.00 0.00 3.01
1733 1838 0.039618 ATGTTGTCTGCCCGGGATTT 59.960 50.000 29.31 0.00 0.00 2.17
1734 1839 0.178975 TGTTGTCTGCCCGGGATTTT 60.179 50.000 29.31 0.00 0.00 1.82
1735 1840 0.966179 GTTGTCTGCCCGGGATTTTT 59.034 50.000 29.31 0.00 0.00 1.94
1765 1870 9.462606 TGAGAAGAGGACTATATTAATATCGCA 57.537 33.333 11.28 1.04 0.00 5.10
1769 1874 9.877178 AAGAGGACTATATTAATATCGCAAAGG 57.123 33.333 11.28 0.00 0.00 3.11
1770 1875 9.036980 AGAGGACTATATTAATATCGCAAAGGT 57.963 33.333 11.28 1.91 0.00 3.50
1773 1878 9.310716 GGACTATATTAATATCGCAAAGGTACC 57.689 37.037 11.28 2.73 0.00 3.34
1774 1879 9.865321 GACTATATTAATATCGCAAAGGTACCA 57.135 33.333 15.94 0.00 0.00 3.25
1780 1885 8.734218 TTAATATCGCAAAGGTACCAATTACA 57.266 30.769 15.94 0.00 31.46 2.41
1781 1886 4.957759 ATCGCAAAGGTACCAATTACAC 57.042 40.909 15.94 1.67 31.46 2.90
1782 1887 3.075884 TCGCAAAGGTACCAATTACACC 58.924 45.455 15.94 0.00 31.46 4.16
1783 1888 2.162809 CGCAAAGGTACCAATTACACCC 59.837 50.000 15.94 0.00 32.43 4.61
1784 1889 3.158676 GCAAAGGTACCAATTACACCCA 58.841 45.455 15.94 0.00 32.43 4.51
1785 1890 3.192633 GCAAAGGTACCAATTACACCCAG 59.807 47.826 15.94 0.00 32.43 4.45
1786 1891 2.801077 AGGTACCAATTACACCCAGC 57.199 50.000 15.94 0.00 32.43 4.85
1787 1892 2.275466 AGGTACCAATTACACCCAGCT 58.725 47.619 15.94 0.00 32.43 4.24
1788 1893 2.238898 AGGTACCAATTACACCCAGCTC 59.761 50.000 15.94 0.00 32.43 4.09
1789 1894 2.238898 GGTACCAATTACACCCAGCTCT 59.761 50.000 7.15 0.00 31.46 4.09
1790 1895 2.496899 ACCAATTACACCCAGCTCTG 57.503 50.000 0.00 0.00 0.00 3.35
1791 1896 1.098050 CCAATTACACCCAGCTCTGC 58.902 55.000 0.00 0.00 0.00 4.26
1792 1897 1.614051 CCAATTACACCCAGCTCTGCA 60.614 52.381 0.00 0.00 0.00 4.41
1793 1898 2.372264 CAATTACACCCAGCTCTGCAT 58.628 47.619 0.00 0.00 0.00 3.96
1794 1899 2.338577 ATTACACCCAGCTCTGCATC 57.661 50.000 0.00 0.00 0.00 3.91
1795 1900 0.983467 TTACACCCAGCTCTGCATCA 59.017 50.000 0.00 0.00 0.00 3.07
1796 1901 0.983467 TACACCCAGCTCTGCATCAA 59.017 50.000 0.00 0.00 0.00 2.57
1797 1902 0.330604 ACACCCAGCTCTGCATCAAT 59.669 50.000 0.00 0.00 0.00 2.57
1798 1903 1.561076 ACACCCAGCTCTGCATCAATA 59.439 47.619 0.00 0.00 0.00 1.90
1799 1904 2.025981 ACACCCAGCTCTGCATCAATAA 60.026 45.455 0.00 0.00 0.00 1.40
1800 1905 2.617308 CACCCAGCTCTGCATCAATAAG 59.383 50.000 0.00 0.00 0.00 1.73
1801 1906 2.507058 ACCCAGCTCTGCATCAATAAGA 59.493 45.455 0.00 0.00 0.00 2.10
1802 1907 3.054139 ACCCAGCTCTGCATCAATAAGAA 60.054 43.478 0.00 0.00 0.00 2.52
1803 1908 3.564644 CCCAGCTCTGCATCAATAAGAAG 59.435 47.826 0.00 0.00 0.00 2.85
1804 1909 4.197750 CCAGCTCTGCATCAATAAGAAGT 58.802 43.478 0.00 0.00 0.00 3.01
1805 1910 4.272991 CCAGCTCTGCATCAATAAGAAGTC 59.727 45.833 0.00 0.00 0.00 3.01
1806 1911 4.874396 CAGCTCTGCATCAATAAGAAGTCA 59.126 41.667 0.00 0.00 0.00 3.41
1807 1912 5.353400 CAGCTCTGCATCAATAAGAAGTCAA 59.647 40.000 0.00 0.00 0.00 3.18
1808 1913 5.942236 AGCTCTGCATCAATAAGAAGTCAAA 59.058 36.000 0.00 0.00 0.00 2.69
1809 1914 6.432162 AGCTCTGCATCAATAAGAAGTCAAAA 59.568 34.615 0.00 0.00 0.00 2.44
1810 1915 7.040201 AGCTCTGCATCAATAAGAAGTCAAAAA 60.040 33.333 0.00 0.00 0.00 1.94
1811 1916 7.272948 GCTCTGCATCAATAAGAAGTCAAAAAG 59.727 37.037 0.00 0.00 0.00 2.27
1812 1917 8.394971 TCTGCATCAATAAGAAGTCAAAAAGA 57.605 30.769 0.00 0.00 0.00 2.52
1829 1934 8.946085 GTCAAAAAGACATCCAGAATACATACA 58.054 33.333 0.00 0.00 46.77 2.29
1830 1935 9.513906 TCAAAAAGACATCCAGAATACATACAA 57.486 29.630 0.00 0.00 0.00 2.41
1831 1936 9.559958 CAAAAAGACATCCAGAATACATACAAC 57.440 33.333 0.00 0.00 0.00 3.32
1832 1937 7.865706 AAAGACATCCAGAATACATACAACC 57.134 36.000 0.00 0.00 0.00 3.77
1833 1938 6.814954 AGACATCCAGAATACATACAACCT 57.185 37.500 0.00 0.00 0.00 3.50
1834 1939 6.586344 AGACATCCAGAATACATACAACCTG 58.414 40.000 0.00 0.00 0.00 4.00
1835 1940 6.384015 AGACATCCAGAATACATACAACCTGA 59.616 38.462 0.00 0.00 0.00 3.86
1836 1941 6.957631 ACATCCAGAATACATACAACCTGAA 58.042 36.000 0.00 0.00 0.00 3.02
1837 1942 7.402054 ACATCCAGAATACATACAACCTGAAA 58.598 34.615 0.00 0.00 0.00 2.69
1838 1943 7.888021 ACATCCAGAATACATACAACCTGAAAA 59.112 33.333 0.00 0.00 0.00 2.29
1839 1944 7.921786 TCCAGAATACATACAACCTGAAAAG 57.078 36.000 0.00 0.00 0.00 2.27
1840 1945 7.685481 TCCAGAATACATACAACCTGAAAAGA 58.315 34.615 0.00 0.00 0.00 2.52
1841 1946 8.160765 TCCAGAATACATACAACCTGAAAAGAA 58.839 33.333 0.00 0.00 0.00 2.52
1842 1947 8.792633 CCAGAATACATACAACCTGAAAAGAAA 58.207 33.333 0.00 0.00 0.00 2.52
1879 1984 2.437625 GGCCTCGCCCTAGTAATCA 58.562 57.895 0.00 0.00 44.06 2.57
1880 1985 0.756903 GGCCTCGCCCTAGTAATCAA 59.243 55.000 0.00 0.00 44.06 2.57
1881 1986 1.540580 GGCCTCGCCCTAGTAATCAAC 60.541 57.143 0.00 0.00 44.06 3.18
1882 1987 1.413077 GCCTCGCCCTAGTAATCAACT 59.587 52.381 0.00 0.00 42.62 3.16
1883 1988 2.158943 GCCTCGCCCTAGTAATCAACTT 60.159 50.000 0.00 0.00 39.80 2.66
1884 1989 3.718815 CCTCGCCCTAGTAATCAACTTC 58.281 50.000 0.00 0.00 39.80 3.01
1885 1990 3.132289 CCTCGCCCTAGTAATCAACTTCA 59.868 47.826 0.00 0.00 39.80 3.02
1886 1991 4.113354 CTCGCCCTAGTAATCAACTTCAC 58.887 47.826 0.00 0.00 39.80 3.18
1887 1992 3.767673 TCGCCCTAGTAATCAACTTCACT 59.232 43.478 0.00 0.00 39.80 3.41
1888 1993 4.113354 CGCCCTAGTAATCAACTTCACTC 58.887 47.826 0.00 0.00 39.80 3.51
1889 1994 4.381612 CGCCCTAGTAATCAACTTCACTCA 60.382 45.833 0.00 0.00 39.80 3.41
1890 1995 5.112686 GCCCTAGTAATCAACTTCACTCAG 58.887 45.833 0.00 0.00 39.80 3.35
1891 1996 5.337652 GCCCTAGTAATCAACTTCACTCAGT 60.338 44.000 0.00 0.00 39.80 3.41
1892 1997 6.127423 GCCCTAGTAATCAACTTCACTCAGTA 60.127 42.308 0.00 0.00 39.80 2.74
1893 1998 7.484975 CCCTAGTAATCAACTTCACTCAGTAG 58.515 42.308 0.00 0.00 39.80 2.57
1894 1999 6.975772 CCTAGTAATCAACTTCACTCAGTAGC 59.024 42.308 0.00 0.00 39.80 3.58
1895 2000 6.346477 AGTAATCAACTTCACTCAGTAGCA 57.654 37.500 0.00 0.00 33.35 3.49
1896 2001 6.759272 AGTAATCAACTTCACTCAGTAGCAA 58.241 36.000 0.00 0.00 33.35 3.91
1897 2002 5.931441 AATCAACTTCACTCAGTAGCAAC 57.069 39.130 0.00 0.00 0.00 4.17
1898 2003 4.400529 TCAACTTCACTCAGTAGCAACA 57.599 40.909 0.00 0.00 0.00 3.33
1899 2004 4.119862 TCAACTTCACTCAGTAGCAACAC 58.880 43.478 0.00 0.00 0.00 3.32
1900 2005 3.819564 ACTTCACTCAGTAGCAACACA 57.180 42.857 0.00 0.00 0.00 3.72
1901 2006 3.458189 ACTTCACTCAGTAGCAACACAC 58.542 45.455 0.00 0.00 0.00 3.82
1902 2007 3.118775 ACTTCACTCAGTAGCAACACACA 60.119 43.478 0.00 0.00 0.00 3.72
1903 2008 3.535280 TCACTCAGTAGCAACACACAA 57.465 42.857 0.00 0.00 0.00 3.33
1904 2009 3.867857 TCACTCAGTAGCAACACACAAA 58.132 40.909 0.00 0.00 0.00 2.83
1905 2010 3.621268 TCACTCAGTAGCAACACACAAAC 59.379 43.478 0.00 0.00 0.00 2.93
1906 2011 3.623060 CACTCAGTAGCAACACACAAACT 59.377 43.478 0.00 0.00 0.00 2.66
1907 2012 4.808895 CACTCAGTAGCAACACACAAACTA 59.191 41.667 0.00 0.00 0.00 2.24
1908 2013 4.809426 ACTCAGTAGCAACACACAAACTAC 59.191 41.667 0.00 0.00 34.71 2.73
1909 2014 4.124238 TCAGTAGCAACACACAAACTACC 58.876 43.478 0.00 0.00 34.99 3.18
1910 2015 3.874543 CAGTAGCAACACACAAACTACCA 59.125 43.478 0.00 0.00 34.99 3.25
1911 2016 3.875134 AGTAGCAACACACAAACTACCAC 59.125 43.478 0.00 0.00 34.99 4.16
1912 2017 2.021457 AGCAACACACAAACTACCACC 58.979 47.619 0.00 0.00 0.00 4.61
1913 2018 1.746220 GCAACACACAAACTACCACCA 59.254 47.619 0.00 0.00 0.00 4.17
1914 2019 2.164624 GCAACACACAAACTACCACCAA 59.835 45.455 0.00 0.00 0.00 3.67
1915 2020 3.367498 GCAACACACAAACTACCACCAAA 60.367 43.478 0.00 0.00 0.00 3.28
1916 2021 4.420168 CAACACACAAACTACCACCAAAG 58.580 43.478 0.00 0.00 0.00 2.77
1917 2022 3.692690 ACACACAAACTACCACCAAAGT 58.307 40.909 0.00 0.00 0.00 2.66
1918 2023 3.692593 ACACACAAACTACCACCAAAGTC 59.307 43.478 0.00 0.00 0.00 3.01
1919 2024 3.692101 CACACAAACTACCACCAAAGTCA 59.308 43.478 0.00 0.00 0.00 3.41
1920 2025 4.338118 CACACAAACTACCACCAAAGTCAT 59.662 41.667 0.00 0.00 0.00 3.06
1921 2026 4.578928 ACACAAACTACCACCAAAGTCATC 59.421 41.667 0.00 0.00 0.00 2.92
1922 2027 4.578516 CACAAACTACCACCAAAGTCATCA 59.421 41.667 0.00 0.00 0.00 3.07
1923 2028 4.578928 ACAAACTACCACCAAAGTCATCAC 59.421 41.667 0.00 0.00 0.00 3.06
1924 2029 3.418684 ACTACCACCAAAGTCATCACC 57.581 47.619 0.00 0.00 0.00 4.02
1925 2030 2.039879 ACTACCACCAAAGTCATCACCC 59.960 50.000 0.00 0.00 0.00 4.61
1926 2031 0.850100 ACCACCAAAGTCATCACCCA 59.150 50.000 0.00 0.00 0.00 4.51
1927 2032 1.216678 ACCACCAAAGTCATCACCCAA 59.783 47.619 0.00 0.00 0.00 4.12
1928 2033 2.315176 CCACCAAAGTCATCACCCAAA 58.685 47.619 0.00 0.00 0.00 3.28
1929 2034 2.697751 CCACCAAAGTCATCACCCAAAA 59.302 45.455 0.00 0.00 0.00 2.44
1930 2035 3.133721 CCACCAAAGTCATCACCCAAAAA 59.866 43.478 0.00 0.00 0.00 1.94
1931 2036 4.119136 CACCAAAGTCATCACCCAAAAAC 58.881 43.478 0.00 0.00 0.00 2.43
1932 2037 3.772025 ACCAAAGTCATCACCCAAAAACA 59.228 39.130 0.00 0.00 0.00 2.83
1933 2038 4.408596 ACCAAAGTCATCACCCAAAAACAT 59.591 37.500 0.00 0.00 0.00 2.71
1934 2039 5.600484 ACCAAAGTCATCACCCAAAAACATA 59.400 36.000 0.00 0.00 0.00 2.29
1935 2040 6.098982 ACCAAAGTCATCACCCAAAAACATAA 59.901 34.615 0.00 0.00 0.00 1.90
1936 2041 6.989169 CCAAAGTCATCACCCAAAAACATAAA 59.011 34.615 0.00 0.00 0.00 1.40
1937 2042 7.497249 CCAAAGTCATCACCCAAAAACATAAAA 59.503 33.333 0.00 0.00 0.00 1.52
1938 2043 8.550376 CAAAGTCATCACCCAAAAACATAAAAG 58.450 33.333 0.00 0.00 0.00 2.27
1939 2044 6.758254 AGTCATCACCCAAAAACATAAAAGG 58.242 36.000 0.00 0.00 0.00 3.11
1940 2045 6.326323 AGTCATCACCCAAAAACATAAAAGGT 59.674 34.615 0.00 0.00 0.00 3.50
1941 2046 6.645003 GTCATCACCCAAAAACATAAAAGGTC 59.355 38.462 0.00 0.00 0.00 3.85
1942 2047 6.553100 TCATCACCCAAAAACATAAAAGGTCT 59.447 34.615 0.00 0.00 0.00 3.85
1943 2048 6.399639 TCACCCAAAAACATAAAAGGTCTC 57.600 37.500 0.00 0.00 0.00 3.36
1944 2049 5.303333 TCACCCAAAAACATAAAAGGTCTCC 59.697 40.000 0.00 0.00 0.00 3.71
1945 2050 5.069781 CACCCAAAAACATAAAAGGTCTCCA 59.930 40.000 0.00 0.00 0.00 3.86
1946 2051 5.663556 ACCCAAAAACATAAAAGGTCTCCAA 59.336 36.000 0.00 0.00 0.00 3.53
1947 2052 6.157123 ACCCAAAAACATAAAAGGTCTCCAAA 59.843 34.615 0.00 0.00 0.00 3.28
1948 2053 7.051000 CCCAAAAACATAAAAGGTCTCCAAAA 58.949 34.615 0.00 0.00 0.00 2.44
1949 2054 7.554476 CCCAAAAACATAAAAGGTCTCCAAAAA 59.446 33.333 0.00 0.00 0.00 1.94
1950 2055 9.119418 CCAAAAACATAAAAGGTCTCCAAAAAT 57.881 29.630 0.00 0.00 0.00 1.82
1951 2056 9.934190 CAAAAACATAAAAGGTCTCCAAAAATG 57.066 29.630 0.00 0.00 0.00 2.32
1952 2057 9.898152 AAAAACATAAAAGGTCTCCAAAAATGA 57.102 25.926 0.00 0.00 0.00 2.57
1954 2059 9.492973 AAACATAAAAGGTCTCCAAAAATGATG 57.507 29.630 0.00 0.00 0.00 3.07
1955 2060 7.099120 ACATAAAAGGTCTCCAAAAATGATGC 58.901 34.615 0.00 0.00 0.00 3.91
1956 2061 4.541973 AAAGGTCTCCAAAAATGATGCC 57.458 40.909 0.00 0.00 0.00 4.40
1957 2062 3.463048 AGGTCTCCAAAAATGATGCCT 57.537 42.857 0.00 0.00 0.00 4.75
1958 2063 3.782992 AGGTCTCCAAAAATGATGCCTT 58.217 40.909 0.00 0.00 0.00 4.35
1959 2064 3.766051 AGGTCTCCAAAAATGATGCCTTC 59.234 43.478 0.00 0.00 0.00 3.46
1960 2065 3.511146 GGTCTCCAAAAATGATGCCTTCA 59.489 43.478 0.00 0.00 39.12 3.02
1961 2066 4.021192 GGTCTCCAAAAATGATGCCTTCAA 60.021 41.667 0.00 0.00 38.03 2.69
1962 2067 5.511202 GGTCTCCAAAAATGATGCCTTCAAA 60.511 40.000 0.00 0.00 38.03 2.69
1963 2068 5.990996 GTCTCCAAAAATGATGCCTTCAAAA 59.009 36.000 0.00 0.00 38.03 2.44
1964 2069 6.482973 GTCTCCAAAAATGATGCCTTCAAAAA 59.517 34.615 0.00 0.00 38.03 1.94
1989 2094 3.726517 GTGCACAAGCGCCATCGT 61.727 61.111 13.17 0.00 45.39 3.73
1990 2095 3.422303 TGCACAAGCGCCATCGTC 61.422 61.111 2.29 0.00 46.23 4.20
1991 2096 4.505217 GCACAAGCGCCATCGTCG 62.505 66.667 2.29 0.00 38.14 5.12
2003 2108 2.752640 TCGTCGCCCGATCCAAGA 60.753 61.111 0.00 0.00 41.60 3.02
2004 2109 2.125326 TCGTCGCCCGATCCAAGAT 61.125 57.895 0.00 0.00 41.60 2.40
2005 2110 1.661821 CGTCGCCCGATCCAAGATC 60.662 63.158 0.00 0.00 39.56 2.75
2006 2111 1.441729 GTCGCCCGATCCAAGATCA 59.558 57.895 5.51 0.00 0.00 2.92
2007 2112 0.034059 GTCGCCCGATCCAAGATCAT 59.966 55.000 5.51 0.00 0.00 2.45
2008 2113 1.272490 GTCGCCCGATCCAAGATCATA 59.728 52.381 5.51 0.00 0.00 2.15
2009 2114 1.546029 TCGCCCGATCCAAGATCATAG 59.454 52.381 5.51 0.00 0.00 2.23
2010 2115 1.404717 CGCCCGATCCAAGATCATAGG 60.405 57.143 5.51 3.82 0.00 2.57
2011 2116 1.625818 GCCCGATCCAAGATCATAGGT 59.374 52.381 5.51 0.00 0.00 3.08
2012 2117 2.039084 GCCCGATCCAAGATCATAGGTT 59.961 50.000 5.51 0.00 0.00 3.50
2013 2118 3.668447 CCCGATCCAAGATCATAGGTTG 58.332 50.000 5.51 0.00 0.00 3.77
2014 2119 3.071602 CCCGATCCAAGATCATAGGTTGT 59.928 47.826 5.51 0.00 0.00 3.32
2015 2120 4.310769 CCGATCCAAGATCATAGGTTGTC 58.689 47.826 5.51 0.00 0.00 3.18
2016 2121 4.310769 CGATCCAAGATCATAGGTTGTCC 58.689 47.826 5.51 0.00 0.00 4.02
2017 2122 3.819564 TCCAAGATCATAGGTTGTCCG 57.180 47.619 0.00 0.00 39.05 4.79
2018 2123 2.434336 TCCAAGATCATAGGTTGTCCGG 59.566 50.000 0.00 0.00 39.05 5.14
2019 2124 2.434336 CCAAGATCATAGGTTGTCCGGA 59.566 50.000 0.00 0.00 39.05 5.14
2020 2125 3.493350 CCAAGATCATAGGTTGTCCGGAG 60.493 52.174 3.06 0.00 39.05 4.63
2021 2126 3.314307 AGATCATAGGTTGTCCGGAGA 57.686 47.619 3.06 0.00 39.05 3.71
2022 2127 3.643237 AGATCATAGGTTGTCCGGAGAA 58.357 45.455 10.51 10.51 39.05 2.87
2023 2128 4.227197 AGATCATAGGTTGTCCGGAGAAT 58.773 43.478 18.07 4.93 39.05 2.40
2024 2129 5.394738 AGATCATAGGTTGTCCGGAGAATA 58.605 41.667 18.07 7.21 39.05 1.75
2025 2130 5.478679 AGATCATAGGTTGTCCGGAGAATAG 59.521 44.000 18.07 6.26 39.05 1.73
2026 2131 3.895656 TCATAGGTTGTCCGGAGAATAGG 59.104 47.826 18.07 8.66 39.05 2.57
2027 2132 2.544844 AGGTTGTCCGGAGAATAGGA 57.455 50.000 18.07 0.00 39.05 2.94
2028 2133 2.829023 AGGTTGTCCGGAGAATAGGAA 58.171 47.619 18.07 0.00 38.41 3.36
2029 2134 3.385115 AGGTTGTCCGGAGAATAGGAAT 58.615 45.455 18.07 0.00 38.41 3.01
2030 2135 3.780850 AGGTTGTCCGGAGAATAGGAATT 59.219 43.478 18.07 0.00 38.41 2.17
2031 2136 4.966805 AGGTTGTCCGGAGAATAGGAATTA 59.033 41.667 18.07 0.00 38.41 1.40
2032 2137 5.055144 GGTTGTCCGGAGAATAGGAATTAC 58.945 45.833 18.07 1.37 38.41 1.89
2033 2138 5.163332 GGTTGTCCGGAGAATAGGAATTACT 60.163 44.000 18.07 0.00 38.41 2.24
2034 2139 6.041296 GGTTGTCCGGAGAATAGGAATTACTA 59.959 42.308 18.07 0.00 38.41 1.82
2035 2140 7.256225 GGTTGTCCGGAGAATAGGAATTACTAT 60.256 40.741 18.07 4.19 38.41 2.12
2036 2141 7.850935 TGTCCGGAGAATAGGAATTACTATT 57.149 36.000 20.80 20.80 44.17 1.73
2037 2142 8.945195 TGTCCGGAGAATAGGAATTACTATTA 57.055 34.615 20.71 3.92 42.19 0.98
2038 2143 9.543231 TGTCCGGAGAATAGGAATTACTATTAT 57.457 33.333 20.71 18.31 42.19 1.28
2055 2160 7.896383 ACTATTATTATTTTTCTGGCAGCCA 57.104 32.000 15.23 15.23 0.00 4.75
2056 2161 7.716612 ACTATTATTATTTTTCTGGCAGCCAC 58.283 34.615 11.22 0.00 0.00 5.01
2057 2162 3.893326 ATTATTTTTCTGGCAGCCACC 57.107 42.857 11.22 0.00 0.00 4.61
2058 2163 2.300956 TATTTTTCTGGCAGCCACCA 57.699 45.000 11.22 0.00 38.29 4.17
2059 2164 1.422531 ATTTTTCTGGCAGCCACCAA 58.577 45.000 11.22 3.14 39.86 3.67
2060 2165 1.422531 TTTTTCTGGCAGCCACCAAT 58.577 45.000 11.22 0.00 39.86 3.16
2061 2166 0.680618 TTTTCTGGCAGCCACCAATG 59.319 50.000 11.22 0.00 39.86 2.82
2062 2167 0.178967 TTTCTGGCAGCCACCAATGA 60.179 50.000 11.22 2.55 39.86 2.57
2063 2168 0.609957 TTCTGGCAGCCACCAATGAG 60.610 55.000 11.22 0.00 39.86 2.90
2064 2169 1.303888 CTGGCAGCCACCAATGAGT 60.304 57.895 11.22 0.00 39.86 3.41
2065 2170 0.896940 CTGGCAGCCACCAATGAGTT 60.897 55.000 11.22 0.00 39.86 3.01
2066 2171 0.469705 TGGCAGCCACCAATGAGTTT 60.470 50.000 11.22 0.00 36.55 2.66
2067 2172 0.681175 GGCAGCCACCAATGAGTTTT 59.319 50.000 6.55 0.00 0.00 2.43
2068 2173 1.337167 GGCAGCCACCAATGAGTTTTC 60.337 52.381 6.55 0.00 0.00 2.29
2069 2174 1.615392 GCAGCCACCAATGAGTTTTCT 59.385 47.619 0.00 0.00 0.00 2.52
2070 2175 2.036346 GCAGCCACCAATGAGTTTTCTT 59.964 45.455 0.00 0.00 0.00 2.52
2071 2176 3.493176 GCAGCCACCAATGAGTTTTCTTT 60.493 43.478 0.00 0.00 0.00 2.52
2072 2177 4.301628 CAGCCACCAATGAGTTTTCTTTC 58.698 43.478 0.00 0.00 0.00 2.62
2073 2178 3.004734 AGCCACCAATGAGTTTTCTTTCG 59.995 43.478 0.00 0.00 0.00 3.46
2074 2179 3.857010 GCCACCAATGAGTTTTCTTTCGG 60.857 47.826 0.00 0.00 0.00 4.30
2075 2180 3.568007 CCACCAATGAGTTTTCTTTCGGA 59.432 43.478 0.00 0.00 0.00 4.55
2076 2181 4.537015 CACCAATGAGTTTTCTTTCGGAC 58.463 43.478 0.00 0.00 0.00 4.79
2077 2182 4.036262 CACCAATGAGTTTTCTTTCGGACA 59.964 41.667 0.00 0.00 0.00 4.02
2078 2183 4.642885 ACCAATGAGTTTTCTTTCGGACAA 59.357 37.500 0.00 0.00 0.00 3.18
2079 2184 5.126384 ACCAATGAGTTTTCTTTCGGACAAA 59.874 36.000 0.00 0.00 0.00 2.83
2080 2185 6.183360 ACCAATGAGTTTTCTTTCGGACAAAT 60.183 34.615 0.00 0.00 0.00 2.32
2081 2186 7.013846 ACCAATGAGTTTTCTTTCGGACAAATA 59.986 33.333 0.00 0.00 0.00 1.40
2082 2187 7.538678 CCAATGAGTTTTCTTTCGGACAAATAG 59.461 37.037 0.00 0.00 0.00 1.73
2083 2188 5.997385 TGAGTTTTCTTTCGGACAAATAGC 58.003 37.500 0.00 0.00 0.00 2.97
2084 2189 5.529430 TGAGTTTTCTTTCGGACAAATAGCA 59.471 36.000 0.00 0.00 0.00 3.49
2085 2190 6.038825 TGAGTTTTCTTTCGGACAAATAGCAA 59.961 34.615 0.00 0.00 0.00 3.91
2086 2191 6.206498 AGTTTTCTTTCGGACAAATAGCAAC 58.794 36.000 0.00 0.00 0.00 4.17
2087 2192 4.398549 TTCTTTCGGACAAATAGCAACG 57.601 40.909 0.00 0.00 0.00 4.10
2088 2193 3.395639 TCTTTCGGACAAATAGCAACGT 58.604 40.909 0.00 0.00 0.00 3.99
2089 2194 3.185594 TCTTTCGGACAAATAGCAACGTG 59.814 43.478 0.00 0.00 0.00 4.49
2090 2195 0.793861 TCGGACAAATAGCAACGTGC 59.206 50.000 0.00 0.00 45.46 5.34
2101 2206 2.748461 GCAACGTGCTAGTGAAACAA 57.252 45.000 0.00 0.00 40.96 2.83
2102 2207 3.268013 GCAACGTGCTAGTGAAACAAT 57.732 42.857 0.00 0.00 40.96 2.71
2103 2208 4.398549 GCAACGTGCTAGTGAAACAATA 57.601 40.909 0.00 0.00 40.96 1.90
2104 2209 4.148891 GCAACGTGCTAGTGAAACAATAC 58.851 43.478 0.00 0.00 40.96 1.89
2105 2210 4.319190 GCAACGTGCTAGTGAAACAATACA 60.319 41.667 0.00 0.00 40.96 2.29
2106 2211 5.743467 CAACGTGCTAGTGAAACAATACAA 58.257 37.500 0.00 0.00 41.43 2.41
2107 2212 5.994887 ACGTGCTAGTGAAACAATACAAA 57.005 34.783 0.00 0.00 41.43 2.83
2108 2213 6.554334 ACGTGCTAGTGAAACAATACAAAT 57.446 33.333 0.00 0.00 41.43 2.32
2109 2214 6.599437 ACGTGCTAGTGAAACAATACAAATC 58.401 36.000 0.00 0.00 41.43 2.17
2110 2215 6.426937 ACGTGCTAGTGAAACAATACAAATCT 59.573 34.615 0.00 0.00 41.43 2.40
2111 2216 6.738200 CGTGCTAGTGAAACAATACAAATCTG 59.262 38.462 0.00 0.00 41.43 2.90
2112 2217 7.360017 CGTGCTAGTGAAACAATACAAATCTGA 60.360 37.037 0.00 0.00 41.43 3.27
2113 2218 7.959651 GTGCTAGTGAAACAATACAAATCTGAG 59.040 37.037 0.00 0.00 41.43 3.35
2114 2219 6.963805 GCTAGTGAAACAATACAAATCTGAGC 59.036 38.462 0.00 0.00 41.43 4.26
2115 2220 6.882610 AGTGAAACAATACAAATCTGAGCA 57.117 33.333 0.00 0.00 41.43 4.26
2116 2221 6.906659 AGTGAAACAATACAAATCTGAGCAG 58.093 36.000 0.00 0.00 41.43 4.24
2117 2222 6.712095 AGTGAAACAATACAAATCTGAGCAGA 59.288 34.615 2.23 2.23 41.43 4.26
2118 2223 7.392673 AGTGAAACAATACAAATCTGAGCAGAT 59.607 33.333 7.15 7.15 45.08 2.90
2119 2224 7.484007 GTGAAACAATACAAATCTGAGCAGATG 59.516 37.037 13.30 6.64 41.52 2.90
2120 2225 7.175467 TGAAACAATACAAATCTGAGCAGATGT 59.825 33.333 13.30 11.74 46.75 3.06
2121 2226 7.458409 AACAATACAAATCTGAGCAGATGTT 57.542 32.000 13.30 9.87 46.75 2.71
2122 2227 7.458409 ACAATACAAATCTGAGCAGATGTTT 57.542 32.000 13.30 4.39 46.75 2.83
2123 2228 7.889469 ACAATACAAATCTGAGCAGATGTTTT 58.111 30.769 13.30 8.41 46.75 2.43
2124 2229 9.013229 ACAATACAAATCTGAGCAGATGTTTTA 57.987 29.630 13.30 8.11 46.75 1.52
2125 2230 9.844790 CAATACAAATCTGAGCAGATGTTTTAA 57.155 29.630 13.30 0.00 46.75 1.52
2126 2231 9.846248 AATACAAATCTGAGCAGATGTTTTAAC 57.154 29.630 13.30 0.00 46.75 2.01
2127 2232 7.275888 ACAAATCTGAGCAGATGTTTTAACA 57.724 32.000 13.30 0.00 46.75 2.41
2128 2233 7.715657 ACAAATCTGAGCAGATGTTTTAACAA 58.284 30.769 13.30 0.00 46.75 2.83
2129 2234 8.196771 ACAAATCTGAGCAGATGTTTTAACAAA 58.803 29.630 13.30 0.00 46.75 2.83
2130 2235 9.033481 CAAATCTGAGCAGATGTTTTAACAAAA 57.967 29.630 13.30 0.00 46.75 2.44
2131 2236 8.579682 AATCTGAGCAGATGTTTTAACAAAAC 57.420 30.769 13.30 7.42 46.75 2.43
2132 2237 7.333528 TCTGAGCAGATGTTTTAACAAAACT 57.666 32.000 13.83 1.13 43.03 2.66
2133 2238 8.445275 TCTGAGCAGATGTTTTAACAAAACTA 57.555 30.769 13.83 3.62 43.03 2.24
2134 2239 9.066892 TCTGAGCAGATGTTTTAACAAAACTAT 57.933 29.630 13.83 7.32 43.03 2.12
2205 2310 8.830201 TGGAGTTATTTTTGATTTCAACATGG 57.170 30.769 0.00 0.00 35.28 3.66
2206 2311 8.428063 TGGAGTTATTTTTGATTTCAACATGGT 58.572 29.630 0.00 0.00 35.28 3.55
2207 2312 9.271828 GGAGTTATTTTTGATTTCAACATGGTT 57.728 29.630 0.00 0.00 35.28 3.67
2210 2315 9.877137 GTTATTTTTGATTTCAACATGGTTTCC 57.123 29.630 0.00 0.00 35.28 3.13
2211 2316 9.618890 TTATTTTTGATTTCAACATGGTTTCCA 57.381 25.926 0.00 0.00 34.92 3.53
2212 2317 7.928307 TTTTTGATTTCAACATGGTTTCCAA 57.072 28.000 0.00 0.00 34.39 3.53
2213 2318 7.928307 TTTTGATTTCAACATGGTTTCCAAA 57.072 28.000 0.00 0.00 34.39 3.28
2214 2319 8.517062 TTTTGATTTCAACATGGTTTCCAAAT 57.483 26.923 0.00 0.00 34.39 2.32
2215 2320 9.618890 TTTTGATTTCAACATGGTTTCCAAATA 57.381 25.926 0.00 0.00 34.39 1.40
2216 2321 8.600449 TTGATTTCAACATGGTTTCCAAATAC 57.400 30.769 0.00 0.00 36.95 1.89
2217 2322 7.961351 TGATTTCAACATGGTTTCCAAATACT 58.039 30.769 0.00 0.00 36.95 2.12
2218 2323 9.083422 TGATTTCAACATGGTTTCCAAATACTA 57.917 29.630 0.00 0.00 36.95 1.82
2231 2336 9.961265 GTTTCCAAATACTATAATAAGTTGGGC 57.039 33.333 7.01 0.00 29.48 5.36
2232 2337 8.700439 TTCCAAATACTATAATAAGTTGGGCC 57.300 34.615 0.00 0.00 29.48 5.80
2233 2338 7.817440 TCCAAATACTATAATAAGTTGGGCCA 58.183 34.615 0.00 0.00 29.48 5.36
2234 2339 8.452868 TCCAAATACTATAATAAGTTGGGCCAT 58.547 33.333 7.26 0.00 29.48 4.40
2235 2340 8.739972 CCAAATACTATAATAAGTTGGGCCATC 58.260 37.037 7.26 6.81 0.00 3.51
2236 2341 9.295825 CAAATACTATAATAAGTTGGGCCATCA 57.704 33.333 16.58 0.00 0.00 3.07
2241 2346 9.875708 ACTATAATAAGTTGGGCCATCATTTAA 57.124 29.630 16.58 0.00 0.00 1.52
2246 2351 8.954834 ATAAGTTGGGCCATCATTTAATATCA 57.045 30.769 16.58 0.00 0.00 2.15
2247 2352 7.673641 AAGTTGGGCCATCATTTAATATCAA 57.326 32.000 16.58 0.00 0.00 2.57
2248 2353 7.860649 AGTTGGGCCATCATTTAATATCAAT 57.139 32.000 16.58 0.00 0.00 2.57
2249 2354 8.954834 AGTTGGGCCATCATTTAATATCAATA 57.045 30.769 16.58 0.00 0.00 1.90
2250 2355 8.806146 AGTTGGGCCATCATTTAATATCAATAC 58.194 33.333 16.58 1.33 0.00 1.89
2251 2356 7.389803 TGGGCCATCATTTAATATCAATACG 57.610 36.000 0.00 0.00 0.00 3.06
2252 2357 6.127758 TGGGCCATCATTTAATATCAATACGC 60.128 38.462 0.00 0.00 0.00 4.42
2253 2358 6.095440 GGGCCATCATTTAATATCAATACGCT 59.905 38.462 4.39 0.00 0.00 5.07
2254 2359 7.362920 GGGCCATCATTTAATATCAATACGCTT 60.363 37.037 4.39 0.00 0.00 4.68
2255 2360 7.485913 GGCCATCATTTAATATCAATACGCTTG 59.514 37.037 0.00 0.00 0.00 4.01
2256 2361 8.023128 GCCATCATTTAATATCAATACGCTTGT 58.977 33.333 0.00 0.00 0.00 3.16
2275 2380 9.763465 ACGCTTGTATAAAATTACACATGTTAC 57.237 29.630 0.00 0.00 31.98 2.50
2276 2381 9.982291 CGCTTGTATAAAATTACACATGTTACT 57.018 29.630 0.00 0.00 31.98 2.24
2360 2465 8.577296 TCTATATATATCTTCCGCACATTAGCC 58.423 37.037 0.00 0.00 0.00 3.93
2361 2466 2.543777 TATCTTCCGCACATTAGCCC 57.456 50.000 0.00 0.00 0.00 5.19
2362 2467 0.179018 ATCTTCCGCACATTAGCCCC 60.179 55.000 0.00 0.00 0.00 5.80
2363 2468 1.823899 CTTCCGCACATTAGCCCCC 60.824 63.158 0.00 0.00 0.00 5.40
2364 2469 2.550699 CTTCCGCACATTAGCCCCCA 62.551 60.000 0.00 0.00 0.00 4.96
2365 2470 1.932156 TTCCGCACATTAGCCCCCAT 61.932 55.000 0.00 0.00 0.00 4.00
2366 2471 1.057275 TCCGCACATTAGCCCCCATA 61.057 55.000 0.00 0.00 0.00 2.74
2367 2472 0.179004 CCGCACATTAGCCCCCATAA 60.179 55.000 0.00 0.00 0.00 1.90
2368 2473 1.547675 CCGCACATTAGCCCCCATAAT 60.548 52.381 0.00 0.00 0.00 1.28
2369 2474 2.238521 CGCACATTAGCCCCCATAATT 58.761 47.619 0.00 0.00 0.00 1.40
2370 2475 2.627699 CGCACATTAGCCCCCATAATTT 59.372 45.455 0.00 0.00 0.00 1.82
2371 2476 3.069443 CGCACATTAGCCCCCATAATTTT 59.931 43.478 0.00 0.00 0.00 1.82
2372 2477 4.631131 GCACATTAGCCCCCATAATTTTC 58.369 43.478 0.00 0.00 0.00 2.29
2373 2478 4.344968 GCACATTAGCCCCCATAATTTTCT 59.655 41.667 0.00 0.00 0.00 2.52
2374 2479 5.163311 GCACATTAGCCCCCATAATTTTCTT 60.163 40.000 0.00 0.00 0.00 2.52
2375 2480 6.041523 GCACATTAGCCCCCATAATTTTCTTA 59.958 38.462 0.00 0.00 0.00 2.10
2376 2481 7.418483 GCACATTAGCCCCCATAATTTTCTTAA 60.418 37.037 0.00 0.00 0.00 1.85
2377 2482 8.650490 CACATTAGCCCCCATAATTTTCTTAAT 58.350 33.333 0.00 0.00 0.00 1.40
2378 2483 9.890915 ACATTAGCCCCCATAATTTTCTTAATA 57.109 29.630 0.00 0.00 0.00 0.98
2395 2500 7.951347 TCTTAATATATACTCCCTCCGTTCC 57.049 40.000 0.00 0.00 0.00 3.62
2396 2501 7.472741 TCTTAATATATACTCCCTCCGTTCCA 58.527 38.462 0.00 0.00 0.00 3.53
2397 2502 8.120538 TCTTAATATATACTCCCTCCGTTCCAT 58.879 37.037 0.00 0.00 0.00 3.41
2398 2503 9.417561 CTTAATATATACTCCCTCCGTTCCATA 57.582 37.037 0.00 0.00 0.00 2.74
2399 2504 9.772605 TTAATATATACTCCCTCCGTTCCATAA 57.227 33.333 0.00 0.00 0.00 1.90
2400 2505 8.855804 AATATATACTCCCTCCGTTCCATAAT 57.144 34.615 0.00 0.00 0.00 1.28
2401 2506 9.947189 AATATATACTCCCTCCGTTCCATAATA 57.053 33.333 0.00 0.00 0.00 0.98
2402 2507 5.997384 ATACTCCCTCCGTTCCATAATAC 57.003 43.478 0.00 0.00 0.00 1.89
2403 2508 3.924922 ACTCCCTCCGTTCCATAATACT 58.075 45.455 0.00 0.00 0.00 2.12
2404 2509 4.296056 ACTCCCTCCGTTCCATAATACTT 58.704 43.478 0.00 0.00 0.00 2.24
2405 2510 4.101119 ACTCCCTCCGTTCCATAATACTTG 59.899 45.833 0.00 0.00 0.00 3.16
2406 2511 4.035112 TCCCTCCGTTCCATAATACTTGT 58.965 43.478 0.00 0.00 0.00 3.16
2407 2512 4.100498 TCCCTCCGTTCCATAATACTTGTC 59.900 45.833 0.00 0.00 0.00 3.18
2408 2513 4.141801 CCCTCCGTTCCATAATACTTGTCA 60.142 45.833 0.00 0.00 0.00 3.58
2409 2514 4.809426 CCTCCGTTCCATAATACTTGTCAC 59.191 45.833 0.00 0.00 0.00 3.67
2410 2515 4.426416 TCCGTTCCATAATACTTGTCACG 58.574 43.478 0.00 0.00 0.00 4.35
2411 2516 3.000925 CCGTTCCATAATACTTGTCACGC 59.999 47.826 0.00 0.00 0.00 5.34
2412 2517 3.863424 CGTTCCATAATACTTGTCACGCT 59.137 43.478 0.00 0.00 0.00 5.07
2413 2518 4.328983 CGTTCCATAATACTTGTCACGCTT 59.671 41.667 0.00 0.00 0.00 4.68
2414 2519 5.163893 CGTTCCATAATACTTGTCACGCTTT 60.164 40.000 0.00 0.00 0.00 3.51
2415 2520 5.794687 TCCATAATACTTGTCACGCTTTG 57.205 39.130 0.00 0.00 0.00 2.77
2416 2521 5.483811 TCCATAATACTTGTCACGCTTTGA 58.516 37.500 0.00 0.00 0.00 2.69
2424 2529 2.663279 GTCACGCTTTGACGTTTCAT 57.337 45.000 0.00 0.00 45.75 2.57
2425 2530 2.981875 GTCACGCTTTGACGTTTCATT 58.018 42.857 0.00 0.00 45.75 2.57
2426 2531 2.964768 GTCACGCTTTGACGTTTCATTC 59.035 45.455 0.00 0.00 45.75 2.67
2427 2532 2.869801 TCACGCTTTGACGTTTCATTCT 59.130 40.909 0.00 0.00 45.75 2.40
2428 2533 3.059868 TCACGCTTTGACGTTTCATTCTC 60.060 43.478 0.00 0.00 45.75 2.87
2429 2534 2.869801 ACGCTTTGACGTTTCATTCTCA 59.130 40.909 0.00 0.00 45.75 3.27
2430 2535 3.311322 ACGCTTTGACGTTTCATTCTCAA 59.689 39.130 0.00 0.00 45.75 3.02
2431 2536 4.024048 ACGCTTTGACGTTTCATTCTCAAT 60.024 37.500 0.00 0.00 45.75 2.57
2432 2537 5.178623 ACGCTTTGACGTTTCATTCTCAATA 59.821 36.000 0.00 0.00 45.75 1.90
2433 2538 5.504755 CGCTTTGACGTTTCATTCTCAATAC 59.495 40.000 0.00 0.00 0.00 1.89
2434 2539 6.370593 GCTTTGACGTTTCATTCTCAATACA 58.629 36.000 0.00 0.00 0.00 2.29
2435 2540 7.023575 GCTTTGACGTTTCATTCTCAATACAT 58.976 34.615 0.00 0.00 0.00 2.29
2436 2541 8.175069 GCTTTGACGTTTCATTCTCAATACATA 58.825 33.333 0.00 0.00 0.00 2.29
2493 2598 7.416964 TTTCCAGAGAAAATTCAAACCAAGA 57.583 32.000 0.00 0.00 39.05 3.02
2494 2599 7.416964 TTCCAGAGAAAATTCAAACCAAGAA 57.583 32.000 0.00 0.00 0.00 2.52
2495 2600 7.601705 TCCAGAGAAAATTCAAACCAAGAAT 57.398 32.000 0.00 0.00 37.30 2.40
2496 2601 8.021898 TCCAGAGAAAATTCAAACCAAGAATT 57.978 30.769 0.00 0.00 45.01 2.17
2497 2602 9.142014 TCCAGAGAAAATTCAAACCAAGAATTA 57.858 29.630 0.00 0.00 42.98 1.40
2498 2603 9.933723 CCAGAGAAAATTCAAACCAAGAATTAT 57.066 29.630 0.00 0.00 42.98 1.28
2530 2635 7.658525 AAATATTGGTGGCTGAATCATAACA 57.341 32.000 0.00 0.00 0.00 2.41
2531 2636 7.844493 AATATTGGTGGCTGAATCATAACAT 57.156 32.000 0.00 0.00 0.00 2.71
2532 2637 8.938801 AATATTGGTGGCTGAATCATAACATA 57.061 30.769 0.00 0.00 0.00 2.29
2533 2638 9.537852 AATATTGGTGGCTGAATCATAACATAT 57.462 29.630 0.00 0.00 0.00 1.78
2534 2639 6.638096 TTGGTGGCTGAATCATAACATATG 57.362 37.500 0.00 0.00 0.00 1.78
2535 2640 5.693961 TGGTGGCTGAATCATAACATATGT 58.306 37.500 1.41 1.41 0.00 2.29
2536 2641 6.128486 TGGTGGCTGAATCATAACATATGTT 58.872 36.000 23.80 23.80 41.73 2.71
2537 2642 6.262944 TGGTGGCTGAATCATAACATATGTTC 59.737 38.462 24.00 9.93 39.31 3.18
2538 2643 6.294176 GGTGGCTGAATCATAACATATGTTCC 60.294 42.308 24.00 15.49 39.31 3.62
2539 2644 6.488006 GTGGCTGAATCATAACATATGTTCCT 59.512 38.462 24.00 10.65 39.31 3.36
2540 2645 7.661437 GTGGCTGAATCATAACATATGTTCCTA 59.339 37.037 24.00 8.15 39.31 2.94
2541 2646 8.217111 TGGCTGAATCATAACATATGTTCCTAA 58.783 33.333 24.00 7.78 39.31 2.69
2542 2647 8.725148 GGCTGAATCATAACATATGTTCCTAAG 58.275 37.037 24.00 13.95 39.31 2.18
2543 2648 9.494271 GCTGAATCATAACATATGTTCCTAAGA 57.506 33.333 24.00 15.20 39.31 2.10
2545 2650 9.494271 TGAATCATAACATATGTTCCTAAGAGC 57.506 33.333 24.00 9.20 39.31 4.09
2546 2651 9.494271 GAATCATAACATATGTTCCTAAGAGCA 57.506 33.333 24.00 4.44 39.31 4.26
2548 2653 9.664332 ATCATAACATATGTTCCTAAGAGCATC 57.336 33.333 24.00 0.00 42.33 3.91
2549 2654 8.874156 TCATAACATATGTTCCTAAGAGCATCT 58.126 33.333 24.00 0.00 42.33 2.90
2550 2655 9.149225 CATAACATATGTTCCTAAGAGCATCTC 57.851 37.037 24.00 0.00 42.33 2.75
2551 2656 6.529220 AACATATGTTCCTAAGAGCATCTCC 58.471 40.000 15.47 0.00 42.33 3.71
2552 2657 6.100279 AACATATGTTCCTAAGAGCATCTCCA 59.900 38.462 15.47 0.00 42.33 3.86
2553 2658 7.688820 AACATATGTTCCTAAGAGCATCTCCAG 60.689 40.741 15.47 0.00 42.33 3.86
2559 2664 2.894387 GAGCATCTCCAGCCACGC 60.894 66.667 0.00 0.00 0.00 5.34
2560 2665 4.479993 AGCATCTCCAGCCACGCC 62.480 66.667 0.00 0.00 0.00 5.68
2562 2667 4.864334 CATCTCCAGCCACGCCCC 62.864 72.222 0.00 0.00 0.00 5.80
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 7.222999 GGTCGAAGAAAAGAATCGTCAAGATAT 59.777 37.037 0.00 0.00 39.69 1.63
36 37 5.238583 GGAAGATTCTGGTCGAAGAAAAGA 58.761 41.667 3.77 0.00 39.54 2.52
42 43 2.941453 TCGGAAGATTCTGGTCGAAG 57.059 50.000 1.69 0.00 34.56 3.79
64 67 6.559521 CGTTTTTGCAGCAGTACATGTTAAAC 60.560 38.462 2.30 0.00 0.00 2.01
95 98 1.443828 GAATGGAGGAGGAGACCGC 59.556 63.158 0.00 0.00 34.73 5.68
136 142 3.554934 TGAAAAGATGGTGCACAAGTCT 58.445 40.909 20.43 14.84 0.00 3.24
216 234 2.166459 TCTTTTCTCATGGCGTCGATCT 59.834 45.455 0.00 0.00 0.00 2.75
349 373 4.490479 GCGTCTCACTTAGTTAAATCGCAC 60.490 45.833 11.43 0.00 39.72 5.34
491 524 0.032217 ATGATGGGTTGGCCGGAATT 60.032 50.000 5.05 0.00 34.97 2.17
520 562 1.664151 CTCTTTTAGTTAAGCGGCCGG 59.336 52.381 29.38 8.95 0.00 6.13
521 563 2.613691 TCTCTTTTAGTTAAGCGGCCG 58.386 47.619 24.05 24.05 0.00 6.13
522 564 5.234543 CAGTATCTCTTTTAGTTAAGCGGCC 59.765 44.000 0.00 0.00 0.00 6.13
523 565 5.234543 CCAGTATCTCTTTTAGTTAAGCGGC 59.765 44.000 0.00 0.00 0.00 6.53
596 638 4.762289 AAGTATTCCACTTAGGCCAGAG 57.238 45.455 5.01 4.40 45.93 3.35
632 675 4.032960 TGCAAGAAAAGCTAGGAATGGA 57.967 40.909 0.00 0.00 0.00 3.41
719 764 2.877335 ACGCACGAAAGGAAGATCTAC 58.123 47.619 0.00 0.00 0.00 2.59
754 799 4.328983 CCAAAGCATATGAAAGCAAGCTTG 59.671 41.667 22.44 22.44 39.22 4.01
756 801 3.118884 CCCAAAGCATATGAAAGCAAGCT 60.119 43.478 6.97 0.00 33.84 3.74
757 802 3.119029 TCCCAAAGCATATGAAAGCAAGC 60.119 43.478 6.97 0.00 0.00 4.01
758 803 4.400251 TCTCCCAAAGCATATGAAAGCAAG 59.600 41.667 6.97 0.00 0.00 4.01
759 804 4.343231 TCTCCCAAAGCATATGAAAGCAA 58.657 39.130 6.97 0.00 0.00 3.91
860 919 1.557269 TTCTCCTGAGGCTCCAAGGC 61.557 60.000 12.86 0.00 41.73 4.35
883 942 5.258841 AGGCAAGATGTTTCAGATTCATGA 58.741 37.500 0.00 0.00 0.00 3.07
917 976 0.885879 CAAGCTTGGCATGAGCAGAA 59.114 50.000 19.14 0.00 44.61 3.02
937 999 1.569653 AGTAGGGTTCTGTGGTAGCC 58.430 55.000 0.00 0.00 0.00 3.93
971 1033 0.476338 TTAGAGGTGGCCAAACTGCA 59.524 50.000 7.24 0.00 0.00 4.41
989 1051 3.314635 GCCAATCTTCATCTTCGATGCTT 59.685 43.478 0.00 0.00 0.00 3.91
1079 1141 2.034376 ACACGAGGACGAGGAGCT 59.966 61.111 0.00 0.00 42.66 4.09
1287 1356 3.198409 TCACCATCATTCCCTTGATCG 57.802 47.619 0.00 0.00 34.09 3.69
1401 1483 0.464373 TGCCTTCATCGCCATCTTCC 60.464 55.000 0.00 0.00 0.00 3.46
1404 1486 1.134007 TCAATGCCTTCATCGCCATCT 60.134 47.619 0.00 0.00 31.27 2.90
1418 1521 0.096976 CGATGGTTGGTCGTCAATGC 59.903 55.000 0.00 0.00 37.73 3.56
1420 1523 0.323629 ACCGATGGTTGGTCGTCAAT 59.676 50.000 0.00 0.00 37.73 2.57
1422 1525 1.290955 GACCGATGGTTGGTCGTCA 59.709 57.895 0.81 0.00 45.82 4.35
1459 1562 2.551459 CCAAACCTTCAGCTTCTCTGTG 59.449 50.000 0.00 0.00 43.32 3.66
1462 1565 2.708325 ACTCCAAACCTTCAGCTTCTCT 59.292 45.455 0.00 0.00 0.00 3.10
1467 1570 2.856222 CTGAACTCCAAACCTTCAGCT 58.144 47.619 0.00 0.00 35.74 4.24
1495 1598 1.307097 GCAGCCTGATCAATCTCACC 58.693 55.000 0.00 0.00 0.00 4.02
1496 1599 1.941294 CTGCAGCCTGATCAATCTCAC 59.059 52.381 0.00 0.00 0.00 3.51
1497 1600 1.835531 TCTGCAGCCTGATCAATCTCA 59.164 47.619 9.47 0.00 0.00 3.27
1515 1618 5.118990 CGAAACCTGGTGATGAACATATCT 58.881 41.667 0.00 0.00 0.00 1.98
1530 1633 0.391130 TCATCCGCTTCCGAAACCTG 60.391 55.000 0.00 0.00 36.29 4.00
1605 1708 4.801147 AGTCGATATACGTACGCTTCAA 57.199 40.909 16.72 0.00 43.13 2.69
1625 1728 5.581085 GGTACCTATATTTGCAGCCGATAAG 59.419 44.000 4.06 0.00 0.00 1.73
1633 1736 6.100004 CCATCTACGGTACCTATATTTGCAG 58.900 44.000 10.90 0.00 0.00 4.41
1637 1740 5.482878 CCCACCATCTACGGTACCTATATTT 59.517 44.000 10.90 0.00 37.07 1.40
1642 1745 1.570501 ACCCACCATCTACGGTACCTA 59.429 52.381 10.90 0.74 37.07 3.08
1649 1752 0.460284 GCTCACACCCACCATCTACG 60.460 60.000 0.00 0.00 0.00 3.51
1689 1793 4.182339 GTCCATCTCGTTTTCTCCCTAAC 58.818 47.826 0.00 0.00 0.00 2.34
1690 1794 3.835978 TGTCCATCTCGTTTTCTCCCTAA 59.164 43.478 0.00 0.00 0.00 2.69
1713 1818 0.680921 AATCCCGGGCAGACAACATG 60.681 55.000 18.49 0.00 0.00 3.21
1739 1844 9.462606 TGCGATATTAATATAGTCCTCTTCTCA 57.537 33.333 14.64 1.79 0.00 3.27
1743 1848 9.877178 CCTTTGCGATATTAATATAGTCCTCTT 57.123 33.333 14.64 0.00 0.00 2.85
1744 1849 9.036980 ACCTTTGCGATATTAATATAGTCCTCT 57.963 33.333 14.64 0.00 0.00 3.69
1747 1852 9.310716 GGTACCTTTGCGATATTAATATAGTCC 57.689 37.037 14.64 3.04 0.00 3.85
1748 1853 9.865321 TGGTACCTTTGCGATATTAATATAGTC 57.135 33.333 14.36 9.12 0.00 2.59
1754 1859 9.344772 TGTAATTGGTACCTTTGCGATATTAAT 57.655 29.630 14.36 0.00 30.94 1.40
1755 1860 8.614346 GTGTAATTGGTACCTTTGCGATATTAA 58.386 33.333 14.36 0.00 30.94 1.40
1756 1861 7.227116 GGTGTAATTGGTACCTTTGCGATATTA 59.773 37.037 14.36 2.28 30.94 0.98
1757 1862 6.038936 GGTGTAATTGGTACCTTTGCGATATT 59.961 38.462 14.36 3.12 30.94 1.28
1758 1863 5.529800 GGTGTAATTGGTACCTTTGCGATAT 59.470 40.000 14.36 0.00 30.94 1.63
1759 1864 4.877251 GGTGTAATTGGTACCTTTGCGATA 59.123 41.667 14.36 0.00 30.94 2.92
1760 1865 3.692593 GGTGTAATTGGTACCTTTGCGAT 59.307 43.478 14.36 0.00 30.94 4.58
1761 1866 3.075884 GGTGTAATTGGTACCTTTGCGA 58.924 45.455 14.36 0.00 30.94 5.10
1762 1867 2.162809 GGGTGTAATTGGTACCTTTGCG 59.837 50.000 14.36 0.00 34.87 4.85
1763 1868 3.158676 TGGGTGTAATTGGTACCTTTGC 58.841 45.455 14.36 10.83 34.87 3.68
1764 1869 3.192633 GCTGGGTGTAATTGGTACCTTTG 59.807 47.826 14.36 0.00 34.87 2.77
1765 1870 3.075432 AGCTGGGTGTAATTGGTACCTTT 59.925 43.478 14.36 9.49 34.87 3.11
1766 1871 2.647802 AGCTGGGTGTAATTGGTACCTT 59.352 45.455 14.36 2.23 34.87 3.50
1767 1872 2.238898 GAGCTGGGTGTAATTGGTACCT 59.761 50.000 14.36 0.00 34.87 3.08
1768 1873 2.238898 AGAGCTGGGTGTAATTGGTACC 59.761 50.000 4.43 4.43 30.94 3.34
1769 1874 3.270877 CAGAGCTGGGTGTAATTGGTAC 58.729 50.000 0.00 0.00 0.00 3.34
1770 1875 2.355716 GCAGAGCTGGGTGTAATTGGTA 60.356 50.000 0.00 0.00 0.00 3.25
1771 1876 1.614317 GCAGAGCTGGGTGTAATTGGT 60.614 52.381 0.00 0.00 0.00 3.67
1772 1877 1.098050 GCAGAGCTGGGTGTAATTGG 58.902 55.000 0.00 0.00 0.00 3.16
1773 1878 1.825090 TGCAGAGCTGGGTGTAATTG 58.175 50.000 0.00 0.00 0.00 2.32
1774 1879 2.025981 TGATGCAGAGCTGGGTGTAATT 60.026 45.455 0.00 0.00 0.00 1.40
1775 1880 1.561076 TGATGCAGAGCTGGGTGTAAT 59.439 47.619 0.00 0.00 0.00 1.89
1776 1881 0.983467 TGATGCAGAGCTGGGTGTAA 59.017 50.000 0.00 0.00 0.00 2.41
1777 1882 0.983467 TTGATGCAGAGCTGGGTGTA 59.017 50.000 0.00 0.00 0.00 2.90
1778 1883 0.330604 ATTGATGCAGAGCTGGGTGT 59.669 50.000 0.00 0.00 0.00 4.16
1779 1884 2.336945 TATTGATGCAGAGCTGGGTG 57.663 50.000 0.00 0.00 0.00 4.61
1780 1885 2.507058 TCTTATTGATGCAGAGCTGGGT 59.493 45.455 0.00 0.00 0.00 4.51
1781 1886 3.204306 TCTTATTGATGCAGAGCTGGG 57.796 47.619 0.00 0.00 0.00 4.45
1782 1887 4.197750 ACTTCTTATTGATGCAGAGCTGG 58.802 43.478 0.00 0.00 0.00 4.85
1783 1888 4.874396 TGACTTCTTATTGATGCAGAGCTG 59.126 41.667 0.00 0.00 0.00 4.24
1784 1889 5.095145 TGACTTCTTATTGATGCAGAGCT 57.905 39.130 0.00 0.00 0.00 4.09
1785 1890 5.808042 TTGACTTCTTATTGATGCAGAGC 57.192 39.130 0.00 0.00 0.00 4.09
1786 1891 8.509690 TCTTTTTGACTTCTTATTGATGCAGAG 58.490 33.333 0.00 0.00 0.00 3.35
1787 1892 8.292448 GTCTTTTTGACTTCTTATTGATGCAGA 58.708 33.333 0.00 0.00 42.21 4.26
1788 1893 8.077991 TGTCTTTTTGACTTCTTATTGATGCAG 58.922 33.333 0.00 0.00 45.54 4.41
1789 1894 7.939782 TGTCTTTTTGACTTCTTATTGATGCA 58.060 30.769 0.00 0.00 45.54 3.96
1790 1895 8.976986 ATGTCTTTTTGACTTCTTATTGATGC 57.023 30.769 0.00 0.00 45.54 3.91
1791 1896 9.565213 GGATGTCTTTTTGACTTCTTATTGATG 57.435 33.333 10.15 0.00 44.48 3.07
1792 1897 9.300681 TGGATGTCTTTTTGACTTCTTATTGAT 57.699 29.630 10.15 0.00 44.48 2.57
1793 1898 8.690203 TGGATGTCTTTTTGACTTCTTATTGA 57.310 30.769 10.15 0.00 44.48 2.57
1794 1899 8.786898 TCTGGATGTCTTTTTGACTTCTTATTG 58.213 33.333 10.15 0.00 44.48 1.90
1795 1900 8.924511 TCTGGATGTCTTTTTGACTTCTTATT 57.075 30.769 10.15 0.00 44.48 1.40
1796 1901 8.924511 TTCTGGATGTCTTTTTGACTTCTTAT 57.075 30.769 10.15 0.00 44.48 1.73
1797 1902 8.924511 ATTCTGGATGTCTTTTTGACTTCTTA 57.075 30.769 10.15 2.46 44.48 2.10
1798 1903 7.830099 ATTCTGGATGTCTTTTTGACTTCTT 57.170 32.000 10.15 0.00 44.48 2.52
1799 1904 7.939039 TGTATTCTGGATGTCTTTTTGACTTCT 59.061 33.333 10.15 0.00 44.48 2.85
1800 1905 8.099364 TGTATTCTGGATGTCTTTTTGACTTC 57.901 34.615 0.00 0.00 45.54 3.01
1801 1906 8.641498 ATGTATTCTGGATGTCTTTTTGACTT 57.359 30.769 0.00 0.00 45.54 3.01
1802 1907 9.167311 GTATGTATTCTGGATGTCTTTTTGACT 57.833 33.333 0.00 0.00 45.54 3.41
1803 1908 8.946085 TGTATGTATTCTGGATGTCTTTTTGAC 58.054 33.333 0.00 0.00 45.54 3.18
1804 1909 9.513906 TTGTATGTATTCTGGATGTCTTTTTGA 57.486 29.630 0.00 0.00 0.00 2.69
1805 1910 9.559958 GTTGTATGTATTCTGGATGTCTTTTTG 57.440 33.333 0.00 0.00 0.00 2.44
1806 1911 8.739972 GGTTGTATGTATTCTGGATGTCTTTTT 58.260 33.333 0.00 0.00 0.00 1.94
1807 1912 8.109634 AGGTTGTATGTATTCTGGATGTCTTTT 58.890 33.333 0.00 0.00 0.00 2.27
1808 1913 7.554118 CAGGTTGTATGTATTCTGGATGTCTTT 59.446 37.037 0.00 0.00 0.00 2.52
1809 1914 7.050377 CAGGTTGTATGTATTCTGGATGTCTT 58.950 38.462 0.00 0.00 0.00 3.01
1810 1915 6.384015 TCAGGTTGTATGTATTCTGGATGTCT 59.616 38.462 0.00 0.00 0.00 3.41
1811 1916 6.582636 TCAGGTTGTATGTATTCTGGATGTC 58.417 40.000 0.00 0.00 0.00 3.06
1812 1917 6.560003 TCAGGTTGTATGTATTCTGGATGT 57.440 37.500 0.00 0.00 0.00 3.06
1813 1918 7.864108 TTTCAGGTTGTATGTATTCTGGATG 57.136 36.000 0.00 0.00 0.00 3.51
1814 1919 8.328758 TCTTTTCAGGTTGTATGTATTCTGGAT 58.671 33.333 0.00 0.00 0.00 3.41
1815 1920 7.685481 TCTTTTCAGGTTGTATGTATTCTGGA 58.315 34.615 0.00 0.00 0.00 3.86
1816 1921 7.921786 TCTTTTCAGGTTGTATGTATTCTGG 57.078 36.000 0.00 0.00 0.00 3.86
1861 1966 3.865752 AGTTGATTACTAGGGCGAGGCC 61.866 54.545 7.70 7.70 41.18 5.19
1862 1967 1.413077 AGTTGATTACTAGGGCGAGGC 59.587 52.381 0.00 0.00 34.56 4.70
1863 1968 3.132289 TGAAGTTGATTACTAGGGCGAGG 59.868 47.826 0.00 0.00 35.54 4.63
1864 1969 4.113354 GTGAAGTTGATTACTAGGGCGAG 58.887 47.826 0.00 0.00 35.54 5.03
1865 1970 3.767673 AGTGAAGTTGATTACTAGGGCGA 59.232 43.478 0.00 0.00 35.54 5.54
1866 1971 4.113354 GAGTGAAGTTGATTACTAGGGCG 58.887 47.826 0.00 0.00 35.54 6.13
1867 1972 5.086104 TGAGTGAAGTTGATTACTAGGGC 57.914 43.478 0.00 0.00 35.54 5.19
1868 1973 6.287589 ACTGAGTGAAGTTGATTACTAGGG 57.712 41.667 0.00 0.00 35.54 3.53
1869 1974 6.975772 GCTACTGAGTGAAGTTGATTACTAGG 59.024 42.308 0.00 0.00 35.54 3.02
1870 1975 7.539436 TGCTACTGAGTGAAGTTGATTACTAG 58.461 38.462 0.00 0.00 35.54 2.57
1871 1976 7.462571 TGCTACTGAGTGAAGTTGATTACTA 57.537 36.000 0.00 0.00 35.54 1.82
1872 1977 6.346477 TGCTACTGAGTGAAGTTGATTACT 57.654 37.500 0.00 0.00 39.32 2.24
1873 1978 6.423905 TGTTGCTACTGAGTGAAGTTGATTAC 59.576 38.462 0.00 0.00 0.00 1.89
1874 1979 6.423905 GTGTTGCTACTGAGTGAAGTTGATTA 59.576 38.462 0.00 0.00 0.00 1.75
1875 1980 5.237344 GTGTTGCTACTGAGTGAAGTTGATT 59.763 40.000 0.00 0.00 0.00 2.57
1876 1981 4.752101 GTGTTGCTACTGAGTGAAGTTGAT 59.248 41.667 0.00 0.00 0.00 2.57
1877 1982 4.119862 GTGTTGCTACTGAGTGAAGTTGA 58.880 43.478 0.00 0.00 0.00 3.18
1878 1983 3.871006 TGTGTTGCTACTGAGTGAAGTTG 59.129 43.478 0.00 0.00 0.00 3.16
1879 1984 3.871594 GTGTGTTGCTACTGAGTGAAGTT 59.128 43.478 0.00 0.00 0.00 2.66
1880 1985 3.118775 TGTGTGTTGCTACTGAGTGAAGT 60.119 43.478 0.00 0.00 0.00 3.01
1881 1986 3.457234 TGTGTGTTGCTACTGAGTGAAG 58.543 45.455 0.00 0.00 0.00 3.02
1882 1987 3.535280 TGTGTGTTGCTACTGAGTGAA 57.465 42.857 0.00 0.00 0.00 3.18
1883 1988 3.535280 TTGTGTGTTGCTACTGAGTGA 57.465 42.857 0.00 0.00 0.00 3.41
1884 1989 3.623060 AGTTTGTGTGTTGCTACTGAGTG 59.377 43.478 0.00 0.00 0.00 3.51
1885 1990 3.873910 AGTTTGTGTGTTGCTACTGAGT 58.126 40.909 0.00 0.00 0.00 3.41
1886 1991 4.211374 GGTAGTTTGTGTGTTGCTACTGAG 59.789 45.833 0.00 0.00 34.25 3.35
1887 1992 4.124238 GGTAGTTTGTGTGTTGCTACTGA 58.876 43.478 0.00 0.00 34.25 3.41
1888 1993 3.874543 TGGTAGTTTGTGTGTTGCTACTG 59.125 43.478 0.00 0.00 34.25 2.74
1889 1994 3.875134 GTGGTAGTTTGTGTGTTGCTACT 59.125 43.478 0.00 0.00 34.25 2.57
1890 1995 3.002965 GGTGGTAGTTTGTGTGTTGCTAC 59.997 47.826 0.00 0.00 33.35 3.58
1891 1996 3.207778 GGTGGTAGTTTGTGTGTTGCTA 58.792 45.455 0.00 0.00 0.00 3.49
1892 1997 2.021457 GGTGGTAGTTTGTGTGTTGCT 58.979 47.619 0.00 0.00 0.00 3.91
1893 1998 1.746220 TGGTGGTAGTTTGTGTGTTGC 59.254 47.619 0.00 0.00 0.00 4.17
1894 1999 4.082463 ACTTTGGTGGTAGTTTGTGTGTTG 60.082 41.667 0.00 0.00 0.00 3.33
1895 2000 4.083565 ACTTTGGTGGTAGTTTGTGTGTT 58.916 39.130 0.00 0.00 0.00 3.32
1896 2001 3.692593 GACTTTGGTGGTAGTTTGTGTGT 59.307 43.478 0.00 0.00 0.00 3.72
1897 2002 3.692101 TGACTTTGGTGGTAGTTTGTGTG 59.308 43.478 0.00 0.00 0.00 3.82
1898 2003 3.958018 TGACTTTGGTGGTAGTTTGTGT 58.042 40.909 0.00 0.00 0.00 3.72
1899 2004 4.578516 TGATGACTTTGGTGGTAGTTTGTG 59.421 41.667 0.00 0.00 0.00 3.33
1900 2005 4.578928 GTGATGACTTTGGTGGTAGTTTGT 59.421 41.667 0.00 0.00 0.00 2.83
1901 2006 4.023193 GGTGATGACTTTGGTGGTAGTTTG 60.023 45.833 0.00 0.00 0.00 2.93
1902 2007 4.142038 GGTGATGACTTTGGTGGTAGTTT 58.858 43.478 0.00 0.00 0.00 2.66
1903 2008 3.497942 GGGTGATGACTTTGGTGGTAGTT 60.498 47.826 0.00 0.00 0.00 2.24
1904 2009 2.039879 GGGTGATGACTTTGGTGGTAGT 59.960 50.000 0.00 0.00 0.00 2.73
1905 2010 2.039746 TGGGTGATGACTTTGGTGGTAG 59.960 50.000 0.00 0.00 0.00 3.18
1906 2011 2.058705 TGGGTGATGACTTTGGTGGTA 58.941 47.619 0.00 0.00 0.00 3.25
1907 2012 0.850100 TGGGTGATGACTTTGGTGGT 59.150 50.000 0.00 0.00 0.00 4.16
1908 2013 1.993956 TTGGGTGATGACTTTGGTGG 58.006 50.000 0.00 0.00 0.00 4.61
1909 2014 4.119136 GTTTTTGGGTGATGACTTTGGTG 58.881 43.478 0.00 0.00 0.00 4.17
1910 2015 3.772025 TGTTTTTGGGTGATGACTTTGGT 59.228 39.130 0.00 0.00 0.00 3.67
1911 2016 4.399004 TGTTTTTGGGTGATGACTTTGG 57.601 40.909 0.00 0.00 0.00 3.28
1912 2017 8.430801 TTTTATGTTTTTGGGTGATGACTTTG 57.569 30.769 0.00 0.00 0.00 2.77
1913 2018 7.714813 CCTTTTATGTTTTTGGGTGATGACTTT 59.285 33.333 0.00 0.00 0.00 2.66
1914 2019 7.147567 ACCTTTTATGTTTTTGGGTGATGACTT 60.148 33.333 0.00 0.00 0.00 3.01
1915 2020 6.326323 ACCTTTTATGTTTTTGGGTGATGACT 59.674 34.615 0.00 0.00 0.00 3.41
1916 2021 6.521162 ACCTTTTATGTTTTTGGGTGATGAC 58.479 36.000 0.00 0.00 0.00 3.06
1917 2022 6.553100 AGACCTTTTATGTTTTTGGGTGATGA 59.447 34.615 0.00 0.00 0.00 2.92
1918 2023 6.758254 AGACCTTTTATGTTTTTGGGTGATG 58.242 36.000 0.00 0.00 0.00 3.07
1919 2024 6.014584 GGAGACCTTTTATGTTTTTGGGTGAT 60.015 38.462 0.00 0.00 0.00 3.06
1920 2025 5.303333 GGAGACCTTTTATGTTTTTGGGTGA 59.697 40.000 0.00 0.00 0.00 4.02
1921 2026 5.069781 TGGAGACCTTTTATGTTTTTGGGTG 59.930 40.000 0.00 0.00 0.00 4.61
1922 2027 5.212745 TGGAGACCTTTTATGTTTTTGGGT 58.787 37.500 0.00 0.00 0.00 4.51
1923 2028 5.799827 TGGAGACCTTTTATGTTTTTGGG 57.200 39.130 0.00 0.00 0.00 4.12
1924 2029 8.499403 TTTTTGGAGACCTTTTATGTTTTTGG 57.501 30.769 0.00 0.00 0.00 3.28
1925 2030 9.934190 CATTTTTGGAGACCTTTTATGTTTTTG 57.066 29.630 0.00 0.00 0.00 2.44
1926 2031 9.898152 TCATTTTTGGAGACCTTTTATGTTTTT 57.102 25.926 0.00 0.00 0.00 1.94
1928 2033 9.492973 CATCATTTTTGGAGACCTTTTATGTTT 57.507 29.630 0.00 0.00 0.00 2.83
1929 2034 7.603784 GCATCATTTTTGGAGACCTTTTATGTT 59.396 33.333 0.00 0.00 0.00 2.71
1930 2035 7.099120 GCATCATTTTTGGAGACCTTTTATGT 58.901 34.615 0.00 0.00 0.00 2.29
1931 2036 6.536224 GGCATCATTTTTGGAGACCTTTTATG 59.464 38.462 0.00 0.00 0.00 1.90
1932 2037 6.441604 AGGCATCATTTTTGGAGACCTTTTAT 59.558 34.615 0.00 0.00 0.00 1.40
1933 2038 5.779771 AGGCATCATTTTTGGAGACCTTTTA 59.220 36.000 0.00 0.00 0.00 1.52
1934 2039 4.594491 AGGCATCATTTTTGGAGACCTTTT 59.406 37.500 0.00 0.00 0.00 2.27
1935 2040 4.162651 AGGCATCATTTTTGGAGACCTTT 58.837 39.130 0.00 0.00 0.00 3.11
1936 2041 3.782992 AGGCATCATTTTTGGAGACCTT 58.217 40.909 0.00 0.00 0.00 3.50
1937 2042 3.463048 AGGCATCATTTTTGGAGACCT 57.537 42.857 0.00 0.00 0.00 3.85
1938 2043 3.511146 TGAAGGCATCATTTTTGGAGACC 59.489 43.478 0.00 0.00 31.50 3.85
1939 2044 4.789012 TGAAGGCATCATTTTTGGAGAC 57.211 40.909 0.00 0.00 31.50 3.36
1940 2045 5.804944 TTTGAAGGCATCATTTTTGGAGA 57.195 34.783 0.00 0.00 38.03 3.71
1941 2046 6.864360 TTTTTGAAGGCATCATTTTTGGAG 57.136 33.333 0.00 0.00 38.03 3.86
1965 2070 0.805711 GGCGCTTGTGCACTGTTTTT 60.806 50.000 19.41 0.00 39.64 1.94
1966 2071 1.226945 GGCGCTTGTGCACTGTTTT 60.227 52.632 19.41 0.00 39.64 2.43
1967 2072 1.737355 ATGGCGCTTGTGCACTGTTT 61.737 50.000 19.41 0.00 39.64 2.83
1968 2073 2.133742 GATGGCGCTTGTGCACTGTT 62.134 55.000 19.41 0.00 39.64 3.16
1969 2074 2.595463 ATGGCGCTTGTGCACTGT 60.595 55.556 19.41 0.00 39.64 3.55
1970 2075 2.177531 GATGGCGCTTGTGCACTG 59.822 61.111 19.41 11.95 39.64 3.66
1971 2076 3.425713 CGATGGCGCTTGTGCACT 61.426 61.111 19.41 0.00 39.64 4.40
1972 2077 3.651480 GACGATGGCGCTTGTGCAC 62.651 63.158 10.75 10.75 42.48 4.57
1973 2078 3.422303 GACGATGGCGCTTGTGCA 61.422 61.111 7.64 0.00 42.48 4.57
1974 2079 4.505217 CGACGATGGCGCTTGTGC 62.505 66.667 7.64 0.00 42.48 4.57
1987 2092 1.661821 GATCTTGGATCGGGCGACG 60.662 63.158 0.00 0.00 46.11 5.12
1988 2093 0.034059 ATGATCTTGGATCGGGCGAC 59.966 55.000 0.00 0.00 0.00 5.19
1989 2094 1.546029 CTATGATCTTGGATCGGGCGA 59.454 52.381 0.00 0.00 0.00 5.54
1990 2095 1.404717 CCTATGATCTTGGATCGGGCG 60.405 57.143 0.00 0.00 0.00 6.13
1991 2096 1.625818 ACCTATGATCTTGGATCGGGC 59.374 52.381 0.00 0.00 0.00 6.13
1992 2097 3.071602 ACAACCTATGATCTTGGATCGGG 59.928 47.826 0.00 7.42 0.00 5.14
1993 2098 4.310769 GACAACCTATGATCTTGGATCGG 58.689 47.826 0.00 1.98 0.00 4.18
1994 2099 4.310769 GGACAACCTATGATCTTGGATCG 58.689 47.826 0.00 0.00 0.00 3.69
1995 2100 4.310769 CGGACAACCTATGATCTTGGATC 58.689 47.826 0.00 1.04 0.00 3.36
1996 2101 3.071602 CCGGACAACCTATGATCTTGGAT 59.928 47.826 0.00 0.00 0.00 3.41
1997 2102 2.434336 CCGGACAACCTATGATCTTGGA 59.566 50.000 0.00 0.00 0.00 3.53
1998 2103 2.434336 TCCGGACAACCTATGATCTTGG 59.566 50.000 0.00 0.00 0.00 3.61
1999 2104 3.384789 TCTCCGGACAACCTATGATCTTG 59.615 47.826 0.00 0.00 0.00 3.02
2000 2105 3.643237 TCTCCGGACAACCTATGATCTT 58.357 45.455 0.00 0.00 0.00 2.40
2001 2106 3.314307 TCTCCGGACAACCTATGATCT 57.686 47.619 0.00 0.00 0.00 2.75
2002 2107 4.608948 ATTCTCCGGACAACCTATGATC 57.391 45.455 0.00 0.00 0.00 2.92
2003 2108 4.528596 CCTATTCTCCGGACAACCTATGAT 59.471 45.833 0.00 0.00 0.00 2.45
2004 2109 3.895656 CCTATTCTCCGGACAACCTATGA 59.104 47.826 0.00 0.00 0.00 2.15
2005 2110 3.895656 TCCTATTCTCCGGACAACCTATG 59.104 47.826 0.00 0.00 0.00 2.23
2006 2111 4.194678 TCCTATTCTCCGGACAACCTAT 57.805 45.455 0.00 0.00 0.00 2.57
2007 2112 3.675348 TCCTATTCTCCGGACAACCTA 57.325 47.619 0.00 0.00 0.00 3.08
2008 2113 2.544844 TCCTATTCTCCGGACAACCT 57.455 50.000 0.00 0.00 0.00 3.50
2009 2114 3.840124 ATTCCTATTCTCCGGACAACC 57.160 47.619 0.00 0.00 0.00 3.77
2010 2115 5.915175 AGTAATTCCTATTCTCCGGACAAC 58.085 41.667 0.00 0.00 0.00 3.32
2011 2116 7.850935 ATAGTAATTCCTATTCTCCGGACAA 57.149 36.000 0.00 0.00 0.00 3.18
2012 2117 7.850935 AATAGTAATTCCTATTCTCCGGACA 57.149 36.000 0.00 0.00 33.38 4.02
2029 2134 9.415008 TGGCTGCCAGAAAAATAATAATAGTAA 57.585 29.630 19.30 0.00 0.00 2.24
2030 2135 8.846211 GTGGCTGCCAGAAAAATAATAATAGTA 58.154 33.333 24.10 0.00 32.34 1.82
2031 2136 7.201911 GGTGGCTGCCAGAAAAATAATAATAGT 60.202 37.037 24.10 0.00 32.34 2.12
2032 2137 7.147976 GGTGGCTGCCAGAAAAATAATAATAG 58.852 38.462 24.10 0.00 32.34 1.73
2033 2138 6.609212 TGGTGGCTGCCAGAAAAATAATAATA 59.391 34.615 24.10 0.00 32.34 0.98
2034 2139 5.424895 TGGTGGCTGCCAGAAAAATAATAAT 59.575 36.000 24.10 0.00 32.34 1.28
2035 2140 4.774726 TGGTGGCTGCCAGAAAAATAATAA 59.225 37.500 24.10 0.00 32.34 1.40
2036 2141 4.348486 TGGTGGCTGCCAGAAAAATAATA 58.652 39.130 24.10 0.00 32.34 0.98
2037 2142 3.172339 TGGTGGCTGCCAGAAAAATAAT 58.828 40.909 24.10 0.00 32.34 1.28
2038 2143 2.603021 TGGTGGCTGCCAGAAAAATAA 58.397 42.857 24.10 0.00 32.34 1.40
2039 2144 2.300956 TGGTGGCTGCCAGAAAAATA 57.699 45.000 24.10 0.41 32.34 1.40
2040 2145 1.422531 TTGGTGGCTGCCAGAAAAAT 58.577 45.000 24.10 0.00 40.01 1.82
2041 2146 1.070445 CATTGGTGGCTGCCAGAAAAA 59.930 47.619 24.10 14.05 40.01 1.94
2042 2147 0.680618 CATTGGTGGCTGCCAGAAAA 59.319 50.000 24.10 16.61 40.01 2.29
2043 2148 0.178967 TCATTGGTGGCTGCCAGAAA 60.179 50.000 24.10 19.22 40.01 2.52
2044 2149 0.609957 CTCATTGGTGGCTGCCAGAA 60.610 55.000 24.10 18.01 40.01 3.02
2045 2150 1.001764 CTCATTGGTGGCTGCCAGA 60.002 57.895 24.10 14.35 40.01 3.86
2046 2151 0.896940 AACTCATTGGTGGCTGCCAG 60.897 55.000 24.10 10.28 40.01 4.85
2047 2152 0.469705 AAACTCATTGGTGGCTGCCA 60.470 50.000 19.30 19.30 36.62 4.92
2048 2153 0.681175 AAAACTCATTGGTGGCTGCC 59.319 50.000 12.87 12.87 0.00 4.85
2049 2154 1.615392 AGAAAACTCATTGGTGGCTGC 59.385 47.619 0.00 0.00 0.00 5.25
2050 2155 4.301628 GAAAGAAAACTCATTGGTGGCTG 58.698 43.478 0.00 0.00 0.00 4.85
2051 2156 3.004734 CGAAAGAAAACTCATTGGTGGCT 59.995 43.478 0.00 0.00 0.00 4.75
2052 2157 3.308530 CGAAAGAAAACTCATTGGTGGC 58.691 45.455 0.00 0.00 0.00 5.01
2053 2158 3.568007 TCCGAAAGAAAACTCATTGGTGG 59.432 43.478 0.00 0.00 0.00 4.61
2054 2159 4.036262 TGTCCGAAAGAAAACTCATTGGTG 59.964 41.667 0.00 0.00 0.00 4.17
2055 2160 4.204012 TGTCCGAAAGAAAACTCATTGGT 58.796 39.130 0.00 0.00 0.00 3.67
2056 2161 4.829064 TGTCCGAAAGAAAACTCATTGG 57.171 40.909 0.00 0.00 0.00 3.16
2057 2162 7.061094 GCTATTTGTCCGAAAGAAAACTCATTG 59.939 37.037 0.00 0.00 0.00 2.82
2058 2163 7.084486 GCTATTTGTCCGAAAGAAAACTCATT 58.916 34.615 0.00 0.00 0.00 2.57
2059 2164 6.206634 TGCTATTTGTCCGAAAGAAAACTCAT 59.793 34.615 0.00 0.00 0.00 2.90
2060 2165 5.529430 TGCTATTTGTCCGAAAGAAAACTCA 59.471 36.000 0.00 0.00 0.00 3.41
2061 2166 5.997385 TGCTATTTGTCCGAAAGAAAACTC 58.003 37.500 0.00 0.00 0.00 3.01
2062 2167 6.206498 GTTGCTATTTGTCCGAAAGAAAACT 58.794 36.000 0.00 0.00 0.00 2.66
2063 2168 5.115021 CGTTGCTATTTGTCCGAAAGAAAAC 59.885 40.000 0.00 0.00 0.00 2.43
2064 2169 5.209240 CGTTGCTATTTGTCCGAAAGAAAA 58.791 37.500 0.00 0.00 0.00 2.29
2065 2170 4.273969 ACGTTGCTATTTGTCCGAAAGAAA 59.726 37.500 0.00 0.00 0.00 2.52
2066 2171 3.810941 ACGTTGCTATTTGTCCGAAAGAA 59.189 39.130 0.00 0.00 0.00 2.52
2067 2172 3.185594 CACGTTGCTATTTGTCCGAAAGA 59.814 43.478 0.00 0.00 0.00 2.52
2068 2173 3.479006 CACGTTGCTATTTGTCCGAAAG 58.521 45.455 0.00 0.00 0.00 2.62
2069 2174 2.350007 GCACGTTGCTATTTGTCCGAAA 60.350 45.455 0.00 0.00 40.96 3.46
2070 2175 1.195900 GCACGTTGCTATTTGTCCGAA 59.804 47.619 0.00 0.00 40.96 4.30
2071 2176 0.793861 GCACGTTGCTATTTGTCCGA 59.206 50.000 0.00 0.00 40.96 4.55
2072 2177 3.290098 GCACGTTGCTATTTGTCCG 57.710 52.632 0.00 0.00 40.96 4.79
2082 2187 2.748461 TTGTTTCACTAGCACGTTGC 57.252 45.000 2.28 2.28 45.46 4.17
2083 2188 5.337219 TGTATTGTTTCACTAGCACGTTG 57.663 39.130 0.00 0.00 0.00 4.10
2084 2189 5.994887 TTGTATTGTTTCACTAGCACGTT 57.005 34.783 0.00 0.00 0.00 3.99
2085 2190 5.994887 TTTGTATTGTTTCACTAGCACGT 57.005 34.783 0.00 0.00 0.00 4.49
2086 2191 6.738200 CAGATTTGTATTGTTTCACTAGCACG 59.262 38.462 0.00 0.00 0.00 5.34
2087 2192 7.806690 TCAGATTTGTATTGTTTCACTAGCAC 58.193 34.615 0.00 0.00 0.00 4.40
2088 2193 7.361201 GCTCAGATTTGTATTGTTTCACTAGCA 60.361 37.037 0.00 0.00 0.00 3.49
2089 2194 6.963805 GCTCAGATTTGTATTGTTTCACTAGC 59.036 38.462 0.00 0.00 0.00 3.42
2090 2195 8.032952 TGCTCAGATTTGTATTGTTTCACTAG 57.967 34.615 0.00 0.00 0.00 2.57
2091 2196 7.877612 TCTGCTCAGATTTGTATTGTTTCACTA 59.122 33.333 0.00 0.00 31.41 2.74
2092 2197 6.712095 TCTGCTCAGATTTGTATTGTTTCACT 59.288 34.615 0.00 0.00 31.41 3.41
2093 2198 6.902341 TCTGCTCAGATTTGTATTGTTTCAC 58.098 36.000 0.00 0.00 31.41 3.18
2094 2199 7.175467 ACATCTGCTCAGATTTGTATTGTTTCA 59.825 33.333 9.50 0.00 45.31 2.69
2095 2200 7.533426 ACATCTGCTCAGATTTGTATTGTTTC 58.467 34.615 9.50 0.00 45.31 2.78
2096 2201 7.458409 ACATCTGCTCAGATTTGTATTGTTT 57.542 32.000 9.50 0.00 45.31 2.83
2097 2202 7.458409 AACATCTGCTCAGATTTGTATTGTT 57.542 32.000 9.50 7.97 45.31 2.83
2098 2203 7.458409 AAACATCTGCTCAGATTTGTATTGT 57.542 32.000 9.50 2.53 45.31 2.71
2099 2204 9.844790 TTAAAACATCTGCTCAGATTTGTATTG 57.155 29.630 9.50 1.95 45.31 1.90
2100 2205 9.846248 GTTAAAACATCTGCTCAGATTTGTATT 57.154 29.630 9.50 4.24 45.31 1.89
2101 2206 9.013229 TGTTAAAACATCTGCTCAGATTTGTAT 57.987 29.630 9.50 4.17 45.31 2.29
2102 2207 8.389779 TGTTAAAACATCTGCTCAGATTTGTA 57.610 30.769 9.50 5.52 45.31 2.41
2103 2208 7.275888 TGTTAAAACATCTGCTCAGATTTGT 57.724 32.000 9.50 5.17 45.31 2.83
2104 2209 8.578308 TTTGTTAAAACATCTGCTCAGATTTG 57.422 30.769 9.50 4.58 45.31 2.32
2105 2210 9.034544 GTTTTGTTAAAACATCTGCTCAGATTT 57.965 29.630 9.50 6.04 45.78 2.17
2106 2211 8.579682 GTTTTGTTAAAACATCTGCTCAGATT 57.420 30.769 9.50 0.00 45.78 2.40
2123 2228 9.491675 TCACGGATAACTTTGATAGTTTTGTTA 57.508 29.630 0.00 0.00 44.73 2.41
2124 2229 8.385898 TCACGGATAACTTTGATAGTTTTGTT 57.614 30.769 0.00 0.00 44.73 2.83
2125 2230 7.972832 TCACGGATAACTTTGATAGTTTTGT 57.027 32.000 0.00 0.00 44.73 2.83
2126 2231 9.840427 AATTCACGGATAACTTTGATAGTTTTG 57.160 29.630 0.00 0.00 44.73 2.44
2179 2284 9.439500 CCATGTTGAAATCAAAAATAACTCCAT 57.561 29.630 0.00 0.00 37.63 3.41
2180 2285 8.428063 ACCATGTTGAAATCAAAAATAACTCCA 58.572 29.630 0.00 0.00 37.63 3.86
2181 2286 8.831715 ACCATGTTGAAATCAAAAATAACTCC 57.168 30.769 0.00 0.00 37.63 3.85
2184 2289 9.877137 GGAAACCATGTTGAAATCAAAAATAAC 57.123 29.630 0.00 0.00 37.63 1.89
2185 2290 9.618890 TGGAAACCATGTTGAAATCAAAAATAA 57.381 25.926 0.00 0.00 37.63 1.40
2186 2291 9.618890 TTGGAAACCATGTTGAAATCAAAAATA 57.381 25.926 0.00 0.00 33.36 1.40
2187 2292 8.517062 TTGGAAACCATGTTGAAATCAAAAAT 57.483 26.923 0.00 0.00 33.36 1.82
2188 2293 7.928307 TTGGAAACCATGTTGAAATCAAAAA 57.072 28.000 0.00 0.00 33.36 1.94
2189 2294 7.928307 TTTGGAAACCATGTTGAAATCAAAA 57.072 28.000 0.00 0.00 33.36 2.44
2190 2295 9.050601 GTATTTGGAAACCATGTTGAAATCAAA 57.949 29.630 0.00 0.00 33.36 2.69
2191 2296 8.428063 AGTATTTGGAAACCATGTTGAAATCAA 58.572 29.630 0.00 0.00 31.53 2.57
2192 2297 7.961351 AGTATTTGGAAACCATGTTGAAATCA 58.039 30.769 0.00 0.00 31.53 2.57
2205 2310 9.961265 GCCCAACTTATTATAGTATTTGGAAAC 57.039 33.333 13.63 4.37 28.99 2.78
2206 2311 9.138596 GGCCCAACTTATTATAGTATTTGGAAA 57.861 33.333 13.63 0.00 28.99 3.13
2207 2312 8.282982 TGGCCCAACTTATTATAGTATTTGGAA 58.717 33.333 0.00 0.00 28.99 3.53
2208 2313 7.817440 TGGCCCAACTTATTATAGTATTTGGA 58.183 34.615 0.00 0.00 28.99 3.53
2209 2314 8.650143 ATGGCCCAACTTATTATAGTATTTGG 57.350 34.615 0.00 8.27 0.00 3.28
2210 2315 9.295825 TGATGGCCCAACTTATTATAGTATTTG 57.704 33.333 0.00 0.00 0.00 2.32
2215 2320 9.875708 TTAAATGATGGCCCAACTTATTATAGT 57.124 29.630 0.00 0.00 0.00 2.12
2220 2325 9.378504 TGATATTAAATGATGGCCCAACTTATT 57.621 29.630 0.00 0.00 0.00 1.40
2221 2326 8.954834 TGATATTAAATGATGGCCCAACTTAT 57.045 30.769 0.00 0.00 0.00 1.73
2222 2327 8.774546 TTGATATTAAATGATGGCCCAACTTA 57.225 30.769 0.00 0.00 0.00 2.24
2223 2328 7.673641 TTGATATTAAATGATGGCCCAACTT 57.326 32.000 0.00 0.00 0.00 2.66
2224 2329 7.860649 ATTGATATTAAATGATGGCCCAACT 57.139 32.000 0.00 0.00 0.00 3.16
2225 2330 7.754924 CGTATTGATATTAAATGATGGCCCAAC 59.245 37.037 0.00 0.00 0.00 3.77
2226 2331 7.576666 GCGTATTGATATTAAATGATGGCCCAA 60.577 37.037 0.00 0.00 0.00 4.12
2227 2332 6.127758 GCGTATTGATATTAAATGATGGCCCA 60.128 38.462 0.00 0.00 0.00 5.36
2228 2333 6.095440 AGCGTATTGATATTAAATGATGGCCC 59.905 38.462 0.00 0.00 0.00 5.80
2229 2334 7.088589 AGCGTATTGATATTAAATGATGGCC 57.911 36.000 0.00 0.00 0.00 5.36
2230 2335 8.023128 ACAAGCGTATTGATATTAAATGATGGC 58.977 33.333 9.12 0.00 0.00 4.40
2249 2354 9.763465 GTAACATGTGTAATTTTATACAAGCGT 57.237 29.630 0.00 1.11 38.09 5.07
2250 2355 9.982291 AGTAACATGTGTAATTTTATACAAGCG 57.018 29.630 0.00 0.62 38.09 4.68
2334 2439 8.577296 GGCTAATGTGCGGAAGATATATATAGA 58.423 37.037 0.00 0.00 0.00 1.98
2335 2440 7.815068 GGGCTAATGTGCGGAAGATATATATAG 59.185 40.741 0.00 0.00 0.00 1.31
2336 2441 7.256190 GGGGCTAATGTGCGGAAGATATATATA 60.256 40.741 0.00 0.00 0.00 0.86
2337 2442 6.464465 GGGGCTAATGTGCGGAAGATATATAT 60.464 42.308 0.00 0.00 0.00 0.86
2338 2443 5.163343 GGGGCTAATGTGCGGAAGATATATA 60.163 44.000 0.00 0.00 0.00 0.86
2339 2444 4.384208 GGGGCTAATGTGCGGAAGATATAT 60.384 45.833 0.00 0.00 0.00 0.86
2340 2445 3.055385 GGGGCTAATGTGCGGAAGATATA 60.055 47.826 0.00 0.00 0.00 0.86
2341 2446 2.290323 GGGGCTAATGTGCGGAAGATAT 60.290 50.000 0.00 0.00 0.00 1.63
2342 2447 1.071699 GGGGCTAATGTGCGGAAGATA 59.928 52.381 0.00 0.00 0.00 1.98
2343 2448 0.179018 GGGGCTAATGTGCGGAAGAT 60.179 55.000 0.00 0.00 0.00 2.40
2344 2449 1.223487 GGGGCTAATGTGCGGAAGA 59.777 57.895 0.00 0.00 0.00 2.87
2345 2450 1.823899 GGGGGCTAATGTGCGGAAG 60.824 63.158 0.00 0.00 0.00 3.46
2346 2451 1.932156 ATGGGGGCTAATGTGCGGAA 61.932 55.000 0.00 0.00 0.00 4.30
2347 2452 1.057275 TATGGGGGCTAATGTGCGGA 61.057 55.000 0.00 0.00 0.00 5.54
2348 2453 0.179004 TTATGGGGGCTAATGTGCGG 60.179 55.000 0.00 0.00 0.00 5.69
2349 2454 1.909700 ATTATGGGGGCTAATGTGCG 58.090 50.000 0.00 0.00 0.00 5.34
2350 2455 4.344968 AGAAAATTATGGGGGCTAATGTGC 59.655 41.667 0.00 0.00 0.00 4.57
2351 2456 6.484364 AAGAAAATTATGGGGGCTAATGTG 57.516 37.500 0.00 0.00 0.00 3.21
2352 2457 8.797436 ATTAAGAAAATTATGGGGGCTAATGT 57.203 30.769 0.00 0.00 0.00 2.71
2369 2474 8.810041 GGAACGGAGGGAGTATATATTAAGAAA 58.190 37.037 0.00 0.00 0.00 2.52
2370 2475 7.951806 TGGAACGGAGGGAGTATATATTAAGAA 59.048 37.037 0.00 0.00 0.00 2.52
2371 2476 7.472741 TGGAACGGAGGGAGTATATATTAAGA 58.527 38.462 0.00 0.00 0.00 2.10
2372 2477 7.713734 TGGAACGGAGGGAGTATATATTAAG 57.286 40.000 0.00 0.00 0.00 1.85
2373 2478 9.772605 TTATGGAACGGAGGGAGTATATATTAA 57.227 33.333 0.00 0.00 0.00 1.40
2374 2479 9.947189 ATTATGGAACGGAGGGAGTATATATTA 57.053 33.333 0.00 0.00 0.00 0.98
2375 2480 8.855804 ATTATGGAACGGAGGGAGTATATATT 57.144 34.615 0.00 0.00 0.00 1.28
2376 2481 9.364653 GTATTATGGAACGGAGGGAGTATATAT 57.635 37.037 0.00 0.00 0.00 0.86
2377 2482 8.563502 AGTATTATGGAACGGAGGGAGTATATA 58.436 37.037 0.00 0.00 0.00 0.86
2378 2483 7.420029 AGTATTATGGAACGGAGGGAGTATAT 58.580 38.462 0.00 0.00 0.00 0.86
2379 2484 6.797707 AGTATTATGGAACGGAGGGAGTATA 58.202 40.000 0.00 0.00 0.00 1.47
2380 2485 5.652324 AGTATTATGGAACGGAGGGAGTAT 58.348 41.667 0.00 0.00 0.00 2.12
2381 2486 5.070823 AGTATTATGGAACGGAGGGAGTA 57.929 43.478 0.00 0.00 0.00 2.59
2382 2487 3.924922 AGTATTATGGAACGGAGGGAGT 58.075 45.455 0.00 0.00 0.00 3.85
2383 2488 4.101119 ACAAGTATTATGGAACGGAGGGAG 59.899 45.833 0.00 0.00 0.00 4.30
2384 2489 4.035112 ACAAGTATTATGGAACGGAGGGA 58.965 43.478 0.00 0.00 0.00 4.20
2385 2490 4.141801 TGACAAGTATTATGGAACGGAGGG 60.142 45.833 0.00 0.00 0.00 4.30
2386 2491 4.809426 GTGACAAGTATTATGGAACGGAGG 59.191 45.833 0.00 0.00 0.00 4.30
2387 2492 4.503007 CGTGACAAGTATTATGGAACGGAG 59.497 45.833 0.00 0.00 31.32 4.63
2388 2493 4.426416 CGTGACAAGTATTATGGAACGGA 58.574 43.478 0.00 0.00 31.32 4.69
2389 2494 3.000925 GCGTGACAAGTATTATGGAACGG 59.999 47.826 0.00 0.00 33.82 4.44
2390 2495 3.863424 AGCGTGACAAGTATTATGGAACG 59.137 43.478 0.00 0.00 35.29 3.95
2391 2496 5.796350 AAGCGTGACAAGTATTATGGAAC 57.204 39.130 0.00 0.00 0.00 3.62
2392 2497 5.935206 TCAAAGCGTGACAAGTATTATGGAA 59.065 36.000 0.00 0.00 0.00 3.53
2393 2498 5.483811 TCAAAGCGTGACAAGTATTATGGA 58.516 37.500 0.00 0.00 0.00 3.41
2394 2499 5.794687 TCAAAGCGTGACAAGTATTATGG 57.205 39.130 0.00 0.00 0.00 2.74
2406 2511 2.869801 AGAATGAAACGTCAAAGCGTGA 59.130 40.909 0.00 0.00 45.00 4.35
2407 2512 3.218398 GAGAATGAAACGTCAAAGCGTG 58.782 45.455 0.00 0.00 45.00 5.34
2409 2514 3.519908 TGAGAATGAAACGTCAAAGCG 57.480 42.857 0.00 0.00 37.30 4.68
2410 2515 6.370593 TGTATTGAGAATGAAACGTCAAAGC 58.629 36.000 0.00 0.00 37.30 3.51
2469 2574 7.416964 TCTTGGTTTGAATTTTCTCTGGAAA 57.583 32.000 0.00 0.00 39.38 3.13
2470 2575 7.416964 TTCTTGGTTTGAATTTTCTCTGGAA 57.583 32.000 0.00 0.00 0.00 3.53
2471 2576 7.601705 ATTCTTGGTTTGAATTTTCTCTGGA 57.398 32.000 0.00 0.00 30.84 3.86
2472 2577 9.933723 ATAATTCTTGGTTTGAATTTTCTCTGG 57.066 29.630 6.96 0.00 42.16 3.86
2504 2609 9.365906 TGTTATGATTCAGCCACCAATATTTAT 57.634 29.630 0.00 0.00 0.00 1.40
2505 2610 8.759481 TGTTATGATTCAGCCACCAATATTTA 57.241 30.769 0.00 0.00 0.00 1.40
2506 2611 7.658525 TGTTATGATTCAGCCACCAATATTT 57.341 32.000 0.00 0.00 0.00 1.40
2507 2612 7.844493 ATGTTATGATTCAGCCACCAATATT 57.156 32.000 0.00 0.00 0.00 1.28
2508 2613 8.963725 CATATGTTATGATTCAGCCACCAATAT 58.036 33.333 0.00 0.00 0.00 1.28
2509 2614 7.944000 ACATATGTTATGATTCAGCCACCAATA 59.056 33.333 1.41 0.00 0.00 1.90
2510 2615 6.779049 ACATATGTTATGATTCAGCCACCAAT 59.221 34.615 1.41 0.00 0.00 3.16
2511 2616 6.128486 ACATATGTTATGATTCAGCCACCAA 58.872 36.000 1.41 0.00 0.00 3.67
2512 2617 5.693961 ACATATGTTATGATTCAGCCACCA 58.306 37.500 1.41 0.00 0.00 4.17
2513 2618 6.294176 GGAACATATGTTATGATTCAGCCACC 60.294 42.308 20.83 9.31 38.56 4.61
2514 2619 6.488006 AGGAACATATGTTATGATTCAGCCAC 59.512 38.462 20.83 4.08 38.56 5.01
2515 2620 6.604171 AGGAACATATGTTATGATTCAGCCA 58.396 36.000 20.83 0.00 38.56 4.75
2516 2621 8.621532 TTAGGAACATATGTTATGATTCAGCC 57.378 34.615 20.83 13.74 38.56 4.85
2517 2622 9.494271 TCTTAGGAACATATGTTATGATTCAGC 57.506 33.333 20.83 5.45 38.56 4.26
2519 2624 9.494271 GCTCTTAGGAACATATGTTATGATTCA 57.506 33.333 20.83 2.80 38.56 2.57
2520 2625 9.494271 TGCTCTTAGGAACATATGTTATGATTC 57.506 33.333 20.83 7.68 38.56 2.52
2522 2627 9.664332 GATGCTCTTAGGAACATATGTTATGAT 57.336 33.333 20.83 9.70 38.56 2.45
2523 2628 8.874156 AGATGCTCTTAGGAACATATGTTATGA 58.126 33.333 20.83 11.85 38.56 2.15
2524 2629 9.149225 GAGATGCTCTTAGGAACATATGTTATG 57.851 37.037 20.83 8.42 38.56 1.90
2525 2630 8.317679 GGAGATGCTCTTAGGAACATATGTTAT 58.682 37.037 20.83 14.62 38.56 1.89
2526 2631 7.290014 TGGAGATGCTCTTAGGAACATATGTTA 59.710 37.037 20.83 3.21 38.56 2.41
2527 2632 6.100279 TGGAGATGCTCTTAGGAACATATGTT 59.900 38.462 20.93 20.93 41.64 2.71
2528 2633 5.604231 TGGAGATGCTCTTAGGAACATATGT 59.396 40.000 1.41 1.41 29.54 2.29
2529 2634 6.106648 TGGAGATGCTCTTAGGAACATATG 57.893 41.667 0.00 0.00 29.54 1.78
2530 2635 5.279910 GCTGGAGATGCTCTTAGGAACATAT 60.280 44.000 0.00 0.00 29.54 1.78
2531 2636 4.039730 GCTGGAGATGCTCTTAGGAACATA 59.960 45.833 0.00 0.00 29.54 2.29
2532 2637 3.181456 GCTGGAGATGCTCTTAGGAACAT 60.181 47.826 0.00 0.00 31.75 2.71
2533 2638 2.169352 GCTGGAGATGCTCTTAGGAACA 59.831 50.000 0.00 0.00 0.00 3.18
2534 2639 2.484594 GGCTGGAGATGCTCTTAGGAAC 60.485 54.545 0.00 0.00 0.00 3.62
2535 2640 1.765314 GGCTGGAGATGCTCTTAGGAA 59.235 52.381 0.00 0.00 0.00 3.36
2536 2641 1.343377 TGGCTGGAGATGCTCTTAGGA 60.343 52.381 0.00 0.00 0.00 2.94
2537 2642 1.126488 TGGCTGGAGATGCTCTTAGG 58.874 55.000 0.00 0.00 0.00 2.69
2538 2643 1.537776 CGTGGCTGGAGATGCTCTTAG 60.538 57.143 0.00 0.00 0.00 2.18
2539 2644 0.461548 CGTGGCTGGAGATGCTCTTA 59.538 55.000 0.00 0.00 0.00 2.10
2540 2645 1.220206 CGTGGCTGGAGATGCTCTT 59.780 57.895 0.00 0.00 0.00 2.85
2541 2646 2.898738 CGTGGCTGGAGATGCTCT 59.101 61.111 0.00 0.00 0.00 4.09
2542 2647 2.894387 GCGTGGCTGGAGATGCTC 60.894 66.667 0.00 0.00 0.00 4.26
2543 2648 4.479993 GGCGTGGCTGGAGATGCT 62.480 66.667 0.00 0.00 0.00 3.79
2545 2650 4.864334 GGGGCGTGGCTGGAGATG 62.864 72.222 0.00 0.00 0.00 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.