Multiple sequence alignment - TraesCS5D01G297000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G297000 chr5D 100.000 3928 0 0 1 3928 393941619 393937692 0.000000e+00 7254.0
1 TraesCS5D01G297000 chr5D 82.589 448 63 13 3494 3927 279361646 279362092 7.960000e-102 381.0
2 TraesCS5D01G297000 chr5D 85.754 358 33 8 3131 3471 393909030 393908674 2.880000e-96 363.0
3 TraesCS5D01G297000 chr5D 85.714 294 41 1 3128 3421 393905504 393905212 3.810000e-80 309.0
4 TraesCS5D01G297000 chr5D 83.212 137 23 0 354 490 64254906 64255042 4.120000e-25 126.0
5 TraesCS5D01G297000 chr5D 86.087 115 13 3 235 346 257806537 257806651 1.920000e-23 121.0
6 TraesCS5D01G297000 chr5D 84.545 110 15 2 239 346 317590370 317590261 1.490000e-19 108.0
7 TraesCS5D01G297000 chr5B 90.303 1516 86 21 219 1710 473793884 473792406 0.000000e+00 1929.0
8 TraesCS5D01G297000 chr5B 90.143 1187 70 11 2235 3390 473791654 473790484 0.000000e+00 1500.0
9 TraesCS5D01G297000 chr5B 83.841 427 66 3 3494 3919 574917374 574917798 1.700000e-108 403.0
10 TraesCS5D01G297000 chr5B 87.000 300 37 2 3628 3927 473790265 473789968 1.750000e-88 337.0
11 TraesCS5D01G297000 chr5B 87.225 227 19 6 1 220 557519605 557519828 2.340000e-62 250.0
12 TraesCS5D01G297000 chr5B 86.486 185 24 1 3134 3317 473775978 473775794 6.660000e-48 202.0
13 TraesCS5D01G297000 chr5B 81.935 155 27 1 349 502 636336940 636336786 3.190000e-26 130.0
14 TraesCS5D01G297000 chr5B 82.482 137 24 0 354 490 625125991 625126127 1.920000e-23 121.0
15 TraesCS5D01G297000 chr5A 89.497 1371 68 27 2229 3528 495934634 495933269 0.000000e+00 1664.0
16 TraesCS5D01G297000 chr5A 87.446 932 48 27 622 1526 495936053 495935164 0.000000e+00 1009.0
17 TraesCS5D01G297000 chr5A 87.283 346 38 5 3131 3471 495928057 495927713 1.320000e-104 390.0
18 TraesCS5D01G297000 chr5A 84.680 359 44 9 3570 3927 495933269 495932921 8.080000e-92 348.0
19 TraesCS5D01G297000 chr5A 87.671 219 18 4 1973 2189 495934845 495934634 3.030000e-61 246.0
20 TraesCS5D01G297000 chr4D 83.373 415 56 12 3506 3908 93285584 93285997 4.790000e-99 372.0
21 TraesCS5D01G297000 chr3A 82.028 434 65 10 3497 3927 256992590 256992167 1.340000e-94 357.0
22 TraesCS5D01G297000 chr3A 79.405 437 76 12 3494 3927 533044366 533044791 2.970000e-76 296.0
23 TraesCS5D01G297000 chr3B 82.005 439 59 15 3494 3927 289282947 289283370 4.830000e-94 355.0
24 TraesCS5D01G297000 chr3B 76.744 215 35 11 355 558 562902548 562902338 5.370000e-19 106.0
25 TraesCS5D01G297000 chr3B 86.316 95 9 4 238 329 651274197 651274104 2.500000e-17 100.0
26 TraesCS5D01G297000 chr2D 78.815 439 77 13 3498 3926 443725812 443725380 8.310000e-72 281.0
27 TraesCS5D01G297000 chr2D 86.087 115 13 3 234 346 126951228 126951341 1.920000e-23 121.0
28 TraesCS5D01G297000 chr7D 80.534 262 41 7 2147 2406 584609443 584609696 4.010000e-45 193.0
29 TraesCS5D01G297000 chr7D 83.607 122 14 6 1799 1914 584231334 584231455 4.150000e-20 110.0
30 TraesCS5D01G297000 chr7D 88.312 77 7 2 1839 1914 584609207 584609282 1.500000e-14 91.6
31 TraesCS5D01G297000 chr7B 79.545 264 39 10 2147 2406 652452109 652452361 1.450000e-39 174.0
32 TraesCS5D01G297000 chr7B 79.008 262 44 8 2147 2406 652412999 652413251 6.750000e-38 169.0
33 TraesCS5D01G297000 chr7B 78.788 264 42 11 2147 2406 656299328 656299075 8.730000e-37 165.0
34 TraesCS5D01G297000 chr7B 79.104 201 34 6 354 546 622518849 622518649 8.860000e-27 132.0
35 TraesCS5D01G297000 chr7B 75.943 212 41 8 344 546 479528870 479528660 2.500000e-17 100.0
36 TraesCS5D01G297000 chr7A 84.810 158 19 4 2249 2406 676957333 676957181 1.890000e-33 154.0
37 TraesCS5D01G297000 chr1A 84.559 136 21 0 355 490 560044055 560044190 6.850000e-28 135.0
38 TraesCS5D01G297000 chr2B 77.982 218 32 9 354 558 775108142 775107928 5.330000e-24 122.0
39 TraesCS5D01G297000 chr2B 82.883 111 15 4 238 346 646025071 646025179 3.230000e-16 97.1
40 TraesCS5D01G297000 chr4B 85.714 112 13 3 238 346 580383205 580383094 8.920000e-22 115.0
41 TraesCS5D01G297000 chr1D 82.759 116 17 3 238 351 444878931 444878817 2.500000e-17 100.0
42 TraesCS5D01G297000 chr2A 83.036 112 15 4 239 346 667963858 667963969 8.980000e-17 99.0
43 TraesCS5D01G297000 chr1B 79.389 131 19 3 424 546 209998138 209998268 6.990000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G297000 chr5D 393937692 393941619 3927 True 7254.000000 7254 100.000000 1 3928 1 chr5D.!!$R2 3927
1 TraesCS5D01G297000 chr5D 393905212 393909030 3818 True 336.000000 363 85.734000 3128 3471 2 chr5D.!!$R3 343
2 TraesCS5D01G297000 chr5B 473789968 473793884 3916 True 1255.333333 1929 89.148667 219 3927 3 chr5B.!!$R3 3708
3 TraesCS5D01G297000 chr5A 495932921 495936053 3132 True 816.750000 1664 87.323500 622 3927 4 chr5A.!!$R2 3305

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
37 38 0.036875 GGGATCCTAAAGGGCGATGG 59.963 60.0 12.58 0.0 35.41 3.51 F
38 39 0.036875 GGATCCTAAAGGGCGATGGG 59.963 60.0 3.84 0.0 35.41 4.00 F
59 60 0.106519 CCATTGGGGAAGTGCTAGGG 60.107 60.0 0.00 0.0 40.01 3.53 F
1269 1323 0.170561 CTTGCTCTGCATTGCACTCC 59.829 55.0 7.38 0.0 38.76 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1392 1456 0.035317 AGCAAGAGATTCGCACACCA 59.965 50.0 0.00 0.00 0.00 4.17 R
1794 2163 0.447801 GTAGCAACCTGGCATGTTCG 59.552 55.0 5.11 3.53 35.83 3.95 R
1927 2296 0.466372 GCCTAATGCCTCTGGGGTTC 60.466 60.0 0.00 0.00 37.43 3.62 R
3022 3511 0.521291 ATGGACAATGGCAACGAACG 59.479 50.0 0.00 0.00 42.51 3.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.802862 AGAGCATGGAAGATGGCAG 57.197 52.632 0.00 0.00 0.00 4.85
19 20 0.183014 AGAGCATGGAAGATGGCAGG 59.817 55.000 0.00 0.00 0.00 4.85
20 21 0.822532 GAGCATGGAAGATGGCAGGG 60.823 60.000 0.00 0.00 0.00 4.45
21 22 1.228228 GCATGGAAGATGGCAGGGA 59.772 57.895 0.00 0.00 0.00 4.20
22 23 0.178970 GCATGGAAGATGGCAGGGAT 60.179 55.000 0.00 0.00 0.00 3.85
23 24 1.906990 CATGGAAGATGGCAGGGATC 58.093 55.000 0.00 0.00 0.00 3.36
24 25 0.776176 ATGGAAGATGGCAGGGATCC 59.224 55.000 1.92 1.92 0.00 3.36
25 26 0.327867 TGGAAGATGGCAGGGATCCT 60.328 55.000 12.58 0.00 0.00 3.24
26 27 1.061424 TGGAAGATGGCAGGGATCCTA 60.061 52.381 12.58 0.00 29.64 2.94
27 28 2.057922 GGAAGATGGCAGGGATCCTAA 58.942 52.381 12.58 0.00 29.64 2.69
28 29 2.443255 GGAAGATGGCAGGGATCCTAAA 59.557 50.000 12.58 0.00 29.64 1.85
29 30 3.497584 GGAAGATGGCAGGGATCCTAAAG 60.498 52.174 12.58 0.30 29.64 1.85
30 31 2.061061 AGATGGCAGGGATCCTAAAGG 58.939 52.381 12.58 0.00 29.64 3.11
31 32 1.074566 GATGGCAGGGATCCTAAAGGG 59.925 57.143 12.58 0.00 35.41 3.95
32 33 1.151679 GGCAGGGATCCTAAAGGGC 59.848 63.158 12.58 6.51 35.41 5.19
33 34 1.227973 GCAGGGATCCTAAAGGGCG 60.228 63.158 12.58 0.00 35.41 6.13
34 35 1.696097 GCAGGGATCCTAAAGGGCGA 61.696 60.000 12.58 0.00 35.41 5.54
35 36 1.059913 CAGGGATCCTAAAGGGCGAT 58.940 55.000 12.58 0.00 35.41 4.58
36 37 1.059913 AGGGATCCTAAAGGGCGATG 58.940 55.000 12.58 0.00 35.41 3.84
37 38 0.036875 GGGATCCTAAAGGGCGATGG 59.963 60.000 12.58 0.00 35.41 3.51
38 39 0.036875 GGATCCTAAAGGGCGATGGG 59.963 60.000 3.84 0.00 35.41 4.00
39 40 0.765510 GATCCTAAAGGGCGATGGGT 59.234 55.000 0.00 0.00 35.41 4.51
40 41 0.765510 ATCCTAAAGGGCGATGGGTC 59.234 55.000 0.00 0.00 35.41 4.46
41 42 1.148498 CCTAAAGGGCGATGGGTCC 59.852 63.158 0.00 0.00 42.41 4.46
42 43 1.632018 CCTAAAGGGCGATGGGTCCA 61.632 60.000 0.00 0.00 45.54 4.02
43 44 0.474184 CTAAAGGGCGATGGGTCCAT 59.526 55.000 1.54 1.54 45.54 3.41
44 45 0.923358 TAAAGGGCGATGGGTCCATT 59.077 50.000 3.77 0.00 45.54 3.16
45 46 0.684153 AAAGGGCGATGGGTCCATTG 60.684 55.000 11.90 11.90 45.54 2.82
46 47 2.519302 GGGCGATGGGTCCATTGG 60.519 66.667 16.59 0.00 41.38 3.16
47 48 2.519302 GGCGATGGGTCCATTGGG 60.519 66.667 16.59 6.00 38.07 4.12
48 49 2.519302 GCGATGGGTCCATTGGGG 60.519 66.667 16.59 3.96 38.07 4.96
49 50 3.055470 GCGATGGGTCCATTGGGGA 62.055 63.158 16.59 0.00 45.89 4.81
58 59 0.918983 TCCATTGGGGAAGTGCTAGG 59.081 55.000 2.09 0.00 44.80 3.02
59 60 0.106519 CCATTGGGGAAGTGCTAGGG 60.107 60.000 0.00 0.00 40.01 3.53
60 61 0.753111 CATTGGGGAAGTGCTAGGGC 60.753 60.000 0.00 0.00 39.26 5.19
61 62 2.270874 ATTGGGGAAGTGCTAGGGCG 62.271 60.000 0.00 0.00 42.25 6.13
62 63 4.176752 GGGGAAGTGCTAGGGCGG 62.177 72.222 0.00 0.00 42.25 6.13
63 64 4.176752 GGGAAGTGCTAGGGCGGG 62.177 72.222 0.00 0.00 42.25 6.13
64 65 4.858680 GGAAGTGCTAGGGCGGGC 62.859 72.222 0.00 0.00 42.25 6.13
77 78 3.257561 CGGGCGAGTGCGAGAATG 61.258 66.667 0.00 0.00 44.10 2.67
78 79 2.125512 GGGCGAGTGCGAGAATGT 60.126 61.111 0.00 0.00 44.10 2.71
79 80 1.141019 GGGCGAGTGCGAGAATGTA 59.859 57.895 0.00 0.00 44.10 2.29
80 81 0.459585 GGGCGAGTGCGAGAATGTAA 60.460 55.000 0.00 0.00 44.10 2.41
81 82 0.645868 GGCGAGTGCGAGAATGTAAC 59.354 55.000 0.00 0.00 44.10 2.50
82 83 1.630148 GCGAGTGCGAGAATGTAACT 58.370 50.000 0.00 0.00 40.82 2.24
83 84 2.479049 GGCGAGTGCGAGAATGTAACTA 60.479 50.000 0.00 0.00 44.10 2.24
84 85 2.530700 GCGAGTGCGAGAATGTAACTAC 59.469 50.000 0.00 0.00 40.82 2.73
85 86 3.106672 CGAGTGCGAGAATGTAACTACC 58.893 50.000 0.00 0.00 40.82 3.18
86 87 3.427098 CGAGTGCGAGAATGTAACTACCA 60.427 47.826 0.00 0.00 40.82 3.25
87 88 4.106197 GAGTGCGAGAATGTAACTACCAG 58.894 47.826 0.00 0.00 0.00 4.00
88 89 3.762288 AGTGCGAGAATGTAACTACCAGA 59.238 43.478 0.00 0.00 0.00 3.86
89 90 4.219944 AGTGCGAGAATGTAACTACCAGAA 59.780 41.667 0.00 0.00 0.00 3.02
90 91 5.105310 AGTGCGAGAATGTAACTACCAGAAT 60.105 40.000 0.00 0.00 0.00 2.40
91 92 6.096423 AGTGCGAGAATGTAACTACCAGAATA 59.904 38.462 0.00 0.00 0.00 1.75
92 93 6.924060 GTGCGAGAATGTAACTACCAGAATAT 59.076 38.462 0.00 0.00 0.00 1.28
93 94 7.115095 GTGCGAGAATGTAACTACCAGAATATC 59.885 40.741 0.00 0.00 0.00 1.63
94 95 6.305877 GCGAGAATGTAACTACCAGAATATCG 59.694 42.308 0.00 0.00 0.00 2.92
95 96 6.305877 CGAGAATGTAACTACCAGAATATCGC 59.694 42.308 0.00 0.00 0.00 4.58
96 97 6.456501 AGAATGTAACTACCAGAATATCGCC 58.543 40.000 0.00 0.00 0.00 5.54
97 98 5.801531 ATGTAACTACCAGAATATCGCCA 57.198 39.130 0.00 0.00 0.00 5.69
98 99 5.801531 TGTAACTACCAGAATATCGCCAT 57.198 39.130 0.00 0.00 0.00 4.40
99 100 5.538118 TGTAACTACCAGAATATCGCCATG 58.462 41.667 0.00 0.00 0.00 3.66
100 101 3.685139 ACTACCAGAATATCGCCATGG 57.315 47.619 7.63 7.63 37.07 3.66
101 102 3.239449 ACTACCAGAATATCGCCATGGA 58.761 45.455 18.40 0.00 34.99 3.41
102 103 2.847327 ACCAGAATATCGCCATGGAG 57.153 50.000 18.40 13.80 34.99 3.86
103 104 2.050144 ACCAGAATATCGCCATGGAGT 58.950 47.619 18.40 5.86 34.99 3.85
104 105 2.224378 ACCAGAATATCGCCATGGAGTG 60.224 50.000 18.40 5.16 34.99 3.51
112 113 4.802051 CCATGGAGTGGGGTGGCG 62.802 72.222 5.56 0.00 44.79 5.69
113 114 4.033776 CATGGAGTGGGGTGGCGT 62.034 66.667 0.00 0.00 0.00 5.68
114 115 2.285069 ATGGAGTGGGGTGGCGTA 60.285 61.111 0.00 0.00 0.00 4.42
115 116 2.367202 ATGGAGTGGGGTGGCGTAG 61.367 63.158 0.00 0.00 0.00 3.51
130 131 2.563471 CGTAGCTGTAGAGTTGGGTC 57.437 55.000 0.00 0.00 0.00 4.46
131 132 1.134560 CGTAGCTGTAGAGTTGGGTCC 59.865 57.143 0.00 0.00 0.00 4.46
132 133 2.176889 GTAGCTGTAGAGTTGGGTCCA 58.823 52.381 0.00 0.00 0.00 4.02
133 134 1.958288 AGCTGTAGAGTTGGGTCCAT 58.042 50.000 0.00 0.00 0.00 3.41
134 135 1.556911 AGCTGTAGAGTTGGGTCCATG 59.443 52.381 0.00 0.00 0.00 3.66
135 136 1.279271 GCTGTAGAGTTGGGTCCATGT 59.721 52.381 0.00 0.00 0.00 3.21
136 137 2.500098 GCTGTAGAGTTGGGTCCATGTA 59.500 50.000 0.00 0.00 0.00 2.29
137 138 3.055385 GCTGTAGAGTTGGGTCCATGTAA 60.055 47.826 0.00 0.00 0.00 2.41
138 139 4.564821 GCTGTAGAGTTGGGTCCATGTAAA 60.565 45.833 0.00 0.00 0.00 2.01
139 140 5.745227 CTGTAGAGTTGGGTCCATGTAAAT 58.255 41.667 0.00 0.00 0.00 1.40
140 141 6.134535 TGTAGAGTTGGGTCCATGTAAATT 57.865 37.500 0.00 0.00 0.00 1.82
141 142 5.943416 TGTAGAGTTGGGTCCATGTAAATTG 59.057 40.000 0.00 0.00 0.00 2.32
142 143 4.998051 AGAGTTGGGTCCATGTAAATTGT 58.002 39.130 0.00 0.00 0.00 2.71
143 144 6.134535 AGAGTTGGGTCCATGTAAATTGTA 57.865 37.500 0.00 0.00 0.00 2.41
144 145 6.548321 AGAGTTGGGTCCATGTAAATTGTAA 58.452 36.000 0.00 0.00 0.00 2.41
145 146 6.433093 AGAGTTGGGTCCATGTAAATTGTAAC 59.567 38.462 0.00 0.00 0.00 2.50
146 147 5.182380 AGTTGGGTCCATGTAAATTGTAACG 59.818 40.000 0.00 0.00 0.00 3.18
147 148 3.440872 TGGGTCCATGTAAATTGTAACGC 59.559 43.478 0.00 0.00 0.00 4.84
148 149 3.181494 GGGTCCATGTAAATTGTAACGCC 60.181 47.826 0.00 0.00 0.00 5.68
149 150 3.440872 GGTCCATGTAAATTGTAACGCCA 59.559 43.478 0.00 0.00 0.00 5.69
150 151 4.082679 GGTCCATGTAAATTGTAACGCCAA 60.083 41.667 0.00 0.00 0.00 4.52
151 152 4.854839 GTCCATGTAAATTGTAACGCCAAC 59.145 41.667 0.00 0.00 0.00 3.77
164 165 3.322466 CCAACGTGGAGGGGCTCT 61.322 66.667 0.00 0.00 40.96 4.09
165 166 2.750350 CAACGTGGAGGGGCTCTT 59.250 61.111 0.00 0.00 0.00 2.85
166 167 1.073199 CAACGTGGAGGGGCTCTTT 59.927 57.895 0.00 0.00 0.00 2.52
167 168 0.955919 CAACGTGGAGGGGCTCTTTC 60.956 60.000 0.00 0.00 0.00 2.62
168 169 2.125766 AACGTGGAGGGGCTCTTTCC 62.126 60.000 0.00 1.20 0.00 3.13
169 170 2.677848 GTGGAGGGGCTCTTTCCC 59.322 66.667 5.40 0.00 45.80 3.97
178 179 3.602205 GGGCTCTTTCCCCATTATCTT 57.398 47.619 0.00 0.00 42.36 2.40
179 180 3.916035 GGGCTCTTTCCCCATTATCTTT 58.084 45.455 0.00 0.00 42.36 2.52
180 181 5.061721 GGGCTCTTTCCCCATTATCTTTA 57.938 43.478 0.00 0.00 42.36 1.85
181 182 5.454966 GGGCTCTTTCCCCATTATCTTTAA 58.545 41.667 0.00 0.00 42.36 1.52
182 183 6.077993 GGGCTCTTTCCCCATTATCTTTAAT 58.922 40.000 0.00 0.00 42.36 1.40
183 184 7.238710 GGGCTCTTTCCCCATTATCTTTAATA 58.761 38.462 0.00 0.00 42.36 0.98
184 185 7.895962 GGGCTCTTTCCCCATTATCTTTAATAT 59.104 37.037 0.00 0.00 42.36 1.28
185 186 9.975218 GGCTCTTTCCCCATTATCTTTAATATA 57.025 33.333 0.00 0.00 0.00 0.86
200 201 8.003508 TCTTTAATATAAAGTATGCACGCTCG 57.996 34.615 9.09 0.00 0.00 5.03
201 202 7.650504 TCTTTAATATAAAGTATGCACGCTCGT 59.349 33.333 9.09 0.00 0.00 4.18
212 213 2.357954 CACGCTCGTGCATATTTGAG 57.642 50.000 9.55 0.00 39.39 3.02
213 214 1.926510 CACGCTCGTGCATATTTGAGA 59.073 47.619 9.55 0.00 39.39 3.27
214 215 2.348362 CACGCTCGTGCATATTTGAGAA 59.652 45.455 9.55 0.00 39.39 2.87
215 216 3.000041 ACGCTCGTGCATATTTGAGAAA 59.000 40.909 10.43 0.00 39.64 2.52
216 217 3.435327 ACGCTCGTGCATATTTGAGAAAA 59.565 39.130 10.43 0.00 39.64 2.29
217 218 4.083537 ACGCTCGTGCATATTTGAGAAAAA 60.084 37.500 10.43 0.00 39.64 1.94
259 260 2.058675 CAGACCGGGGTTCAACTCT 58.941 57.895 6.32 0.00 0.00 3.24
262 263 1.813728 GACCGGGGTTCAACTCTCGT 61.814 60.000 6.32 0.00 0.00 4.18
266 267 1.737008 GGGTTCAACTCTCGTCGGC 60.737 63.158 0.00 0.00 0.00 5.54
269 270 0.318784 GTTCAACTCTCGTCGGCAGT 60.319 55.000 0.00 0.00 0.00 4.40
275 276 0.803117 CTCTCGTCGGCAGTGAGTTA 59.197 55.000 0.00 0.00 0.00 2.24
278 279 1.174078 TCGTCGGCAGTGAGTTACCA 61.174 55.000 0.00 0.00 0.00 3.25
279 280 0.732880 CGTCGGCAGTGAGTTACCAG 60.733 60.000 0.00 0.00 0.00 4.00
280 281 0.601558 GTCGGCAGTGAGTTACCAGA 59.398 55.000 0.00 0.00 0.00 3.86
313 316 7.651704 CCGGGTGGCTTTTTCTATAAAAATATG 59.348 37.037 0.00 0.00 42.22 1.78
351 354 3.119849 CCCACGGATCTCATTTTGTTGTC 60.120 47.826 0.00 0.00 0.00 3.18
353 356 2.159627 ACGGATCTCATTTTGTTGTCGC 59.840 45.455 0.00 0.00 0.00 5.19
371 374 6.595772 TGTCGCAAAATTTTAAACATTGCT 57.404 29.167 20.55 3.16 43.08 3.91
413 416 8.948145 ACAAATTTAACACCGTATAGTATGCAA 58.052 29.630 0.00 0.00 0.00 4.08
419 422 9.597170 TTAACACCGTATAGTATGCAACATAAA 57.403 29.630 0.00 0.00 0.00 1.40
687 697 3.050619 CGGAACATATGACGGCTCTAAC 58.949 50.000 10.38 0.00 0.00 2.34
705 715 2.367202 CCGCATACACCTGGTCCCT 61.367 63.158 0.00 0.00 0.00 4.20
706 716 1.144057 CGCATACACCTGGTCCCTC 59.856 63.158 0.00 0.00 0.00 4.30
707 717 1.527370 GCATACACCTGGTCCCTCC 59.473 63.158 0.00 0.00 0.00 4.30
708 718 1.984288 GCATACACCTGGTCCCTCCC 61.984 65.000 0.00 0.00 34.77 4.30
710 720 0.346932 ATACACCTGGTCCCTCCCAT 59.653 55.000 0.00 0.00 33.00 4.00
711 721 1.020462 TACACCTGGTCCCTCCCATA 58.980 55.000 0.00 0.00 33.00 2.74
712 722 0.326618 ACACCTGGTCCCTCCCATAG 60.327 60.000 0.00 0.00 33.00 2.23
713 723 0.326618 CACCTGGTCCCTCCCATAGT 60.327 60.000 0.00 0.00 33.00 2.12
913 932 5.100259 CACATGCATTTGTTCTCTTCCATC 58.900 41.667 4.61 0.00 0.00 3.51
919 938 2.961526 TGTTCTCTTCCATCGTAGCC 57.038 50.000 0.00 0.00 0.00 3.93
920 939 2.457598 TGTTCTCTTCCATCGTAGCCT 58.542 47.619 0.00 0.00 0.00 4.58
921 940 2.427453 TGTTCTCTTCCATCGTAGCCTC 59.573 50.000 0.00 0.00 0.00 4.70
922 941 2.691011 GTTCTCTTCCATCGTAGCCTCT 59.309 50.000 0.00 0.00 0.00 3.69
923 942 3.019799 TCTCTTCCATCGTAGCCTCTT 57.980 47.619 0.00 0.00 0.00 2.85
924 943 2.952978 TCTCTTCCATCGTAGCCTCTTC 59.047 50.000 0.00 0.00 0.00 2.87
925 944 2.955660 CTCTTCCATCGTAGCCTCTTCT 59.044 50.000 0.00 0.00 0.00 2.85
926 945 4.138290 CTCTTCCATCGTAGCCTCTTCTA 58.862 47.826 0.00 0.00 0.00 2.10
927 946 4.138290 TCTTCCATCGTAGCCTCTTCTAG 58.862 47.826 0.00 0.00 0.00 2.43
928 947 2.231529 TCCATCGTAGCCTCTTCTAGC 58.768 52.381 0.00 0.00 0.00 3.42
929 948 1.271102 CCATCGTAGCCTCTTCTAGCC 59.729 57.143 0.00 0.00 0.00 3.93
930 949 2.235016 CATCGTAGCCTCTTCTAGCCT 58.765 52.381 0.00 0.00 0.00 4.58
931 950 1.970092 TCGTAGCCTCTTCTAGCCTC 58.030 55.000 0.00 0.00 0.00 4.70
932 951 0.589223 CGTAGCCTCTTCTAGCCTCG 59.411 60.000 0.00 0.00 0.00 4.63
933 952 0.312729 GTAGCCTCTTCTAGCCTCGC 59.687 60.000 0.00 0.00 0.00 5.03
934 953 0.183971 TAGCCTCTTCTAGCCTCGCT 59.816 55.000 0.00 0.00 43.41 4.93
935 954 1.106944 AGCCTCTTCTAGCCTCGCTC 61.107 60.000 0.00 0.00 40.44 5.03
936 955 2.037871 CCTCTTCTAGCCTCGCTCC 58.962 63.158 0.00 0.00 40.44 4.70
937 956 1.460273 CCTCTTCTAGCCTCGCTCCC 61.460 65.000 0.00 0.00 40.44 4.30
938 957 1.455959 TCTTCTAGCCTCGCTCCCC 60.456 63.158 0.00 0.00 40.44 4.81
939 958 1.456705 CTTCTAGCCTCGCTCCCCT 60.457 63.158 0.00 0.00 40.44 4.79
940 959 1.455959 TTCTAGCCTCGCTCCCCTC 60.456 63.158 0.00 0.00 40.44 4.30
941 960 1.939082 TTCTAGCCTCGCTCCCCTCT 61.939 60.000 0.00 0.00 40.44 3.69
989 1037 1.449353 CCAGCCAGCTACCTGATCC 59.551 63.158 12.91 0.00 41.77 3.36
1122 1176 1.168714 GGAAGTCCAGCAACATCACC 58.831 55.000 0.00 0.00 35.64 4.02
1125 1179 0.320771 AGTCCAGCAACATCACCGTC 60.321 55.000 0.00 0.00 0.00 4.79
1153 1207 4.476410 TCTACTGCGACGCCTGCG 62.476 66.667 18.69 10.40 46.03 5.18
1235 1289 1.134371 GCTCTTTCCGGCTACCATTCT 60.134 52.381 0.00 0.00 0.00 2.40
1269 1323 0.170561 CTTGCTCTGCATTGCACTCC 59.829 55.000 7.38 0.00 38.76 3.85
1271 1325 2.037136 GCTCTGCATTGCACTCCGT 61.037 57.895 7.38 0.00 33.79 4.69
1272 1326 0.740868 GCTCTGCATTGCACTCCGTA 60.741 55.000 7.38 0.00 33.79 4.02
1273 1327 1.945387 CTCTGCATTGCACTCCGTAT 58.055 50.000 7.38 0.00 33.79 3.06
1275 1329 0.940126 CTGCATTGCACTCCGTATCC 59.060 55.000 7.38 0.00 33.79 2.59
1276 1330 0.809636 TGCATTGCACTCCGTATCCG 60.810 55.000 7.38 0.00 31.71 4.18
1277 1331 0.810031 GCATTGCACTCCGTATCCGT 60.810 55.000 3.15 0.00 0.00 4.69
1279 1333 0.179084 ATTGCACTCCGTATCCGTGG 60.179 55.000 0.00 0.00 0.00 4.94
1280 1334 1.252215 TTGCACTCCGTATCCGTGGA 61.252 55.000 0.00 0.00 0.00 4.02
1296 1352 2.673368 CGTGGATTAGTTTGCTCTGGAC 59.327 50.000 0.00 0.00 0.00 4.02
1304 1360 2.038814 TTTGCTCTGGACCGCAGTGA 62.039 55.000 0.00 0.00 37.46 3.41
1392 1456 5.242171 TCTGCAACAGATTTGTCAATCACAT 59.758 36.000 0.00 0.00 41.37 3.21
1395 1459 5.775686 CAACAGATTTGTCAATCACATGGT 58.224 37.500 0.00 0.00 41.37 3.55
1434 1498 1.020861 TGCAGAGTGCTACATTGCCG 61.021 55.000 0.00 0.00 45.31 5.69
1440 1504 1.133025 AGTGCTACATTGCCGATTTGC 59.867 47.619 0.00 0.00 0.00 3.68
1441 1505 0.455410 TGCTACATTGCCGATTTGCC 59.545 50.000 0.00 0.00 0.00 4.52
1460 1524 3.506844 TGCCGTACCCTTTTATTGGTTTC 59.493 43.478 0.00 0.00 36.04 2.78
1494 1558 4.523083 TGGGAATTGATAAGTAGGCACAC 58.477 43.478 0.00 0.00 0.00 3.82
1497 1561 4.576463 GGAATTGATAAGTAGGCACACCAG 59.424 45.833 0.00 0.00 39.06 4.00
1576 1641 7.332182 ACTCGGCTAAAGAGTAAAAGAAAGATG 59.668 37.037 0.00 0.00 46.06 2.90
1586 1651 7.659390 AGAGTAAAAGAAAGATGTGAACTGAGG 59.341 37.037 0.00 0.00 0.00 3.86
1590 1655 5.146010 AGAAAGATGTGAACTGAGGAGAC 57.854 43.478 0.00 0.00 0.00 3.36
1599 1664 3.260740 GAACTGAGGAGACATTGAGCAG 58.739 50.000 0.00 0.00 0.00 4.24
1621 1686 7.667043 CAGACTTTTAACCTGCATTGTACTA 57.333 36.000 0.00 0.00 0.00 1.82
1632 1697 5.177881 CCTGCATTGTACTAACACGTTTACA 59.822 40.000 0.00 0.00 34.61 2.41
1673 1738 4.386652 GCTGCATGTTGTTAACAGATTTGG 59.613 41.667 8.56 0.00 45.95 3.28
1685 1750 9.357161 TGTTAACAGATTTGGTAATTACAAGGT 57.643 29.630 17.16 0.00 38.65 3.50
1686 1751 9.620660 GTTAACAGATTTGGTAATTACAAGGTG 57.379 33.333 17.16 8.64 38.65 4.00
1690 1755 4.857509 TTTGGTAATTACAAGGTGTGCC 57.142 40.909 17.16 0.00 0.00 5.01
1692 1757 3.417101 TGGTAATTACAAGGTGTGCCAG 58.583 45.455 17.16 0.00 37.19 4.85
1695 1760 1.808411 ATTACAAGGTGTGCCAGTCG 58.192 50.000 0.00 0.00 37.19 4.18
1700 1765 2.996168 AAGGTGTGCCAGTCGAGTGC 62.996 60.000 15.06 10.71 37.19 4.40
1728 2011 9.601217 ACATGCATACTACCTTAAAAGAAGTAG 57.399 33.333 0.00 0.00 38.50 2.57
1729 2012 8.552034 CATGCATACTACCTTAAAAGAAGTAGC 58.448 37.037 0.00 11.30 36.49 3.58
1730 2013 7.848128 TGCATACTACCTTAAAAGAAGTAGCT 58.152 34.615 0.00 0.00 36.49 3.32
1744 2113 8.760980 AAAGAAGTAGCTATCTGTACTCTCAT 57.239 34.615 0.00 0.00 0.00 2.90
1753 2122 7.229306 AGCTATCTGTACTCTCATCTCTTTCTG 59.771 40.741 0.00 0.00 0.00 3.02
1754 2123 7.228507 GCTATCTGTACTCTCATCTCTTTCTGA 59.771 40.741 0.00 0.00 0.00 3.27
1771 2140 8.786826 TCTTTCTGAAGAGTTTTACTGAACAA 57.213 30.769 0.00 0.00 36.99 2.83
1773 2142 9.443283 CTTTCTGAAGAGTTTTACTGAACAATG 57.557 33.333 0.00 0.00 34.71 2.82
1774 2143 8.731275 TTCTGAAGAGTTTTACTGAACAATGA 57.269 30.769 0.00 0.00 31.94 2.57
1812 2181 0.676466 CCGAACATGCCAGGTTGCTA 60.676 55.000 0.00 0.00 0.00 3.49
1828 2197 6.366332 CAGGTTGCTACAGAGTTTTAGTAGTG 59.634 42.308 0.00 0.00 37.97 2.74
1838 2207 3.325135 AGTTTTAGTAGTGCTCTGCCTGT 59.675 43.478 0.00 0.00 0.00 4.00
1849 2218 1.227527 CTGCCTGTGGTGTCGTTCA 60.228 57.895 0.00 0.00 0.00 3.18
1851 2220 0.813610 TGCCTGTGGTGTCGTTCAAG 60.814 55.000 0.00 0.00 0.00 3.02
1857 2226 2.128035 GTGGTGTCGTTCAAGTCTCAG 58.872 52.381 0.00 0.00 0.00 3.35
1860 2229 1.789464 GTGTCGTTCAAGTCTCAGCTG 59.211 52.381 7.63 7.63 0.00 4.24
1874 2243 3.261643 TCTCAGCTGTGACCATGTATTGT 59.738 43.478 14.67 0.00 0.00 2.71
1904 2273 4.098914 TGTTATGCCTGATATGAACCCC 57.901 45.455 0.00 0.00 0.00 4.95
1913 2282 2.785269 TGATATGAACCCCAGAGGCATT 59.215 45.455 0.00 0.00 40.58 3.56
1914 2283 3.205056 TGATATGAACCCCAGAGGCATTT 59.795 43.478 0.00 0.00 40.58 2.32
1915 2284 2.629017 ATGAACCCCAGAGGCATTTT 57.371 45.000 0.00 0.00 40.58 1.82
1916 2285 2.397044 TGAACCCCAGAGGCATTTTT 57.603 45.000 0.00 0.00 40.58 1.94
1936 2305 5.429681 TTTTCTCGAATATGAACCCCAGA 57.570 39.130 0.00 0.00 0.00 3.86
1937 2306 4.672587 TTCTCGAATATGAACCCCAGAG 57.327 45.455 0.00 0.00 0.00 3.35
1938 2307 2.965831 TCTCGAATATGAACCCCAGAGG 59.034 50.000 0.00 0.00 43.78 3.69
1939 2308 1.416401 TCGAATATGAACCCCAGAGGC 59.584 52.381 0.00 0.00 40.58 4.70
1940 2309 1.140852 CGAATATGAACCCCAGAGGCA 59.859 52.381 0.00 0.00 40.58 4.75
1941 2310 2.224621 CGAATATGAACCCCAGAGGCAT 60.225 50.000 0.00 0.00 40.58 4.40
2027 2457 1.504275 ATCCCCTGCTTTGCCACTCT 61.504 55.000 0.00 0.00 0.00 3.24
2028 2458 0.840288 TCCCCTGCTTTGCCACTCTA 60.840 55.000 0.00 0.00 0.00 2.43
2029 2459 0.678048 CCCCTGCTTTGCCACTCTAC 60.678 60.000 0.00 0.00 0.00 2.59
2030 2460 1.021390 CCCTGCTTTGCCACTCTACG 61.021 60.000 0.00 0.00 0.00 3.51
2031 2461 0.320771 CCTGCTTTGCCACTCTACGT 60.321 55.000 0.00 0.00 0.00 3.57
2055 2485 5.668558 ACGTTGCTACTTAAACTTTCAGG 57.331 39.130 0.00 0.00 0.00 3.86
2056 2486 5.121105 ACGTTGCTACTTAAACTTTCAGGT 58.879 37.500 0.00 0.00 0.00 4.00
2057 2487 6.282930 ACGTTGCTACTTAAACTTTCAGGTA 58.717 36.000 0.00 0.00 0.00 3.08
2058 2488 6.423001 ACGTTGCTACTTAAACTTTCAGGTAG 59.577 38.462 0.00 0.00 0.00 3.18
2060 2490 6.429521 TGCTACTTAAACTTTCAGGTAGGT 57.570 37.500 0.00 0.00 0.00 3.08
2062 2492 6.932960 TGCTACTTAAACTTTCAGGTAGGTTC 59.067 38.462 0.00 0.00 0.00 3.62
2063 2493 6.370994 GCTACTTAAACTTTCAGGTAGGTTCC 59.629 42.308 0.00 0.00 0.00 3.62
2064 2494 6.256643 ACTTAAACTTTCAGGTAGGTTCCA 57.743 37.500 0.00 0.00 0.00 3.53
2163 2599 2.664402 ACTGCAATGAACCCTGAACT 57.336 45.000 0.00 0.00 0.00 3.01
2176 2612 1.859080 CCTGAACTAGATTAACGCCGC 59.141 52.381 0.00 0.00 0.00 6.53
2182 2618 1.517276 CTAGATTAACGCCGCGACTTG 59.483 52.381 21.79 7.55 0.00 3.16
2190 2626 3.434319 CCGCGACTTGGCAGCATT 61.434 61.111 8.23 0.00 0.00 3.56
2191 2627 2.099062 CGCGACTTGGCAGCATTC 59.901 61.111 0.00 0.00 0.00 2.67
2192 2628 2.393768 CGCGACTTGGCAGCATTCT 61.394 57.895 0.00 0.00 0.00 2.40
2193 2629 1.427020 GCGACTTGGCAGCATTCTC 59.573 57.895 0.00 0.00 0.00 2.87
2194 2630 1.300971 GCGACTTGGCAGCATTCTCA 61.301 55.000 0.00 0.00 0.00 3.27
2195 2631 1.159285 CGACTTGGCAGCATTCTCAA 58.841 50.000 0.00 0.00 0.00 3.02
2196 2632 1.536766 CGACTTGGCAGCATTCTCAAA 59.463 47.619 0.00 0.00 0.00 2.69
2197 2633 2.163010 CGACTTGGCAGCATTCTCAAAT 59.837 45.455 0.00 0.00 0.00 2.32
2198 2634 3.366679 CGACTTGGCAGCATTCTCAAATT 60.367 43.478 0.00 0.00 0.00 1.82
2199 2635 4.171754 GACTTGGCAGCATTCTCAAATTC 58.828 43.478 0.00 0.00 0.00 2.17
2200 2636 3.830755 ACTTGGCAGCATTCTCAAATTCT 59.169 39.130 0.00 0.00 0.00 2.40
2201 2637 3.861276 TGGCAGCATTCTCAAATTCTG 57.139 42.857 0.00 0.00 38.64 3.02
2202 2638 2.494471 TGGCAGCATTCTCAAATTCTGG 59.506 45.455 0.00 0.00 36.85 3.86
2203 2639 2.494870 GGCAGCATTCTCAAATTCTGGT 59.505 45.455 0.00 0.00 36.85 4.00
2204 2640 3.508762 GCAGCATTCTCAAATTCTGGTG 58.491 45.455 0.00 0.00 36.85 4.17
2213 2649 6.377327 TCTCAAATTCTGGTGTTTCTGTTC 57.623 37.500 0.00 0.00 0.00 3.18
2214 2650 5.885352 TCTCAAATTCTGGTGTTTCTGTTCA 59.115 36.000 0.00 0.00 0.00 3.18
2218 2654 6.966534 AATTCTGGTGTTTCTGTTCATCTT 57.033 33.333 0.00 0.00 0.00 2.40
2219 2655 6.966534 ATTCTGGTGTTTCTGTTCATCTTT 57.033 33.333 0.00 0.00 0.00 2.52
2221 2657 6.135290 TCTGGTGTTTCTGTTCATCTTTTG 57.865 37.500 0.00 0.00 0.00 2.44
2294 2731 3.490439 TCTGTGGTGTGAATGTGATGT 57.510 42.857 0.00 0.00 0.00 3.06
2345 2783 1.939934 TGCAACTTCAAGGTGAACTCG 59.060 47.619 6.64 0.00 33.95 4.18
2973 3435 3.144506 CAGGACAAGCTTGACAAGACAT 58.855 45.455 32.50 7.60 0.00 3.06
2975 3437 2.351157 GGACAAGCTTGACAAGACATGC 60.351 50.000 32.50 9.24 39.92 4.06
3022 3511 0.030369 GCTTGTCATGCATGCTAGGC 59.970 55.000 22.25 19.01 42.76 3.93
3124 3619 7.933577 TGATCATTATTAGCCTTGTCGATTTCT 59.066 33.333 0.00 0.00 0.00 2.52
3161 3656 2.764314 GCATGTGGCACGATGGGAC 61.764 63.158 22.55 9.65 43.97 4.46
3224 7248 0.610174 TCAGAATCGCTGCCTTGTCT 59.390 50.000 0.00 0.00 44.52 3.41
3229 7253 0.107945 ATCGCTGCCTTGTCTCTTCC 60.108 55.000 0.00 0.00 0.00 3.46
3245 7269 4.076394 CTCTTCCCTCGGATCCTAGTAAG 58.924 52.174 10.75 13.32 0.00 2.34
3246 7270 2.973983 TCCCTCGGATCCTAGTAAGG 57.026 55.000 10.75 5.50 45.21 2.69
3310 7334 7.750014 TCAATCTTTTTCTTTTGCAAACAAAGC 59.250 29.630 12.39 0.00 46.08 3.51
3317 7341 0.104671 TTGCAAACAAAGCCCAGCTC 59.895 50.000 0.00 0.00 38.25 4.09
3320 7344 1.035139 CAAACAAAGCCCAGCTCTGT 58.965 50.000 0.00 0.00 42.00 3.41
3329 7353 0.745845 CCCAGCTCTGTGTGTATGCC 60.746 60.000 0.00 0.00 0.00 4.40
3331 7355 1.086067 CAGCTCTGTGTGTATGCCGG 61.086 60.000 0.00 0.00 0.00 6.13
3372 7405 8.503458 AAGATATTTTTCAGATGGACAGTGAG 57.497 34.615 0.00 0.00 0.00 3.51
3438 7596 2.154462 GGGGTCAGTCAGTTTCATGTG 58.846 52.381 0.00 0.00 0.00 3.21
3448 7609 1.812571 AGTTTCATGTGGACATTCGCC 59.187 47.619 0.00 0.00 33.61 5.54
3488 7649 3.091545 TGGCCAAGACAATTCAGAATCC 58.908 45.455 0.61 0.00 0.00 3.01
3500 7661 1.123077 CAGAATCCGACATGGGGAGA 58.877 55.000 12.56 0.00 36.91 3.71
3519 7680 5.006386 GGAGACCATCTTCATCAACTTTGT 58.994 41.667 0.00 0.00 0.00 2.83
3524 7685 4.021719 CCATCTTCATCAACTTTGTTGCCT 60.022 41.667 5.65 0.00 0.00 4.75
3526 7687 3.569701 TCTTCATCAACTTTGTTGCCTCC 59.430 43.478 5.65 0.00 0.00 4.30
3527 7688 2.942804 TCATCAACTTTGTTGCCTCCA 58.057 42.857 5.65 0.00 0.00 3.86
3528 7689 3.499338 TCATCAACTTTGTTGCCTCCAT 58.501 40.909 5.65 0.00 0.00 3.41
3529 7690 3.256383 TCATCAACTTTGTTGCCTCCATG 59.744 43.478 5.65 4.68 0.00 3.66
3530 7691 2.942804 TCAACTTTGTTGCCTCCATGA 58.057 42.857 5.65 0.00 0.00 3.07
3531 7692 3.499338 TCAACTTTGTTGCCTCCATGAT 58.501 40.909 5.65 0.00 0.00 2.45
3532 7693 3.256383 TCAACTTTGTTGCCTCCATGATG 59.744 43.478 5.65 0.00 0.00 3.07
3533 7694 3.159213 ACTTTGTTGCCTCCATGATGA 57.841 42.857 0.00 0.00 0.00 2.92
3534 7695 3.705051 ACTTTGTTGCCTCCATGATGAT 58.295 40.909 0.00 0.00 0.00 2.45
3535 7696 3.446161 ACTTTGTTGCCTCCATGATGATG 59.554 43.478 0.00 0.00 0.00 3.07
3536 7697 2.812836 TGTTGCCTCCATGATGATGT 57.187 45.000 0.00 0.00 0.00 3.06
3537 7698 2.371306 TGTTGCCTCCATGATGATGTG 58.629 47.619 0.00 0.00 0.00 3.21
3538 7699 2.291089 TGTTGCCTCCATGATGATGTGT 60.291 45.455 0.00 0.00 0.00 3.72
3539 7700 2.047002 TGCCTCCATGATGATGTGTG 57.953 50.000 0.00 0.00 0.00 3.82
3540 7701 1.560611 TGCCTCCATGATGATGTGTGA 59.439 47.619 0.00 0.00 0.00 3.58
3541 7702 2.219458 GCCTCCATGATGATGTGTGAG 58.781 52.381 0.00 0.00 0.00 3.51
3542 7703 2.421107 GCCTCCATGATGATGTGTGAGT 60.421 50.000 0.00 0.00 0.00 3.41
3543 7704 3.181462 GCCTCCATGATGATGTGTGAGTA 60.181 47.826 0.00 0.00 0.00 2.59
3544 7705 4.629092 CCTCCATGATGATGTGTGAGTAG 58.371 47.826 0.00 0.00 0.00 2.57
3545 7706 4.100653 CCTCCATGATGATGTGTGAGTAGT 59.899 45.833 0.00 0.00 0.00 2.73
3546 7707 5.396101 CCTCCATGATGATGTGTGAGTAGTT 60.396 44.000 0.00 0.00 0.00 2.24
3547 7708 6.053632 TCCATGATGATGTGTGAGTAGTTT 57.946 37.500 0.00 0.00 0.00 2.66
3548 7709 6.108687 TCCATGATGATGTGTGAGTAGTTTC 58.891 40.000 0.00 0.00 0.00 2.78
3549 7710 6.070596 TCCATGATGATGTGTGAGTAGTTTCT 60.071 38.462 0.00 0.00 0.00 2.52
3550 7711 6.596888 CCATGATGATGTGTGAGTAGTTTCTT 59.403 38.462 0.00 0.00 0.00 2.52
3551 7712 7.201591 CCATGATGATGTGTGAGTAGTTTCTTC 60.202 40.741 0.00 0.00 0.00 2.87
3552 7713 5.863935 TGATGATGTGTGAGTAGTTTCTTCG 59.136 40.000 0.00 0.00 0.00 3.79
3553 7714 5.447624 TGATGTGTGAGTAGTTTCTTCGA 57.552 39.130 0.00 0.00 0.00 3.71
3554 7715 5.461526 TGATGTGTGAGTAGTTTCTTCGAG 58.538 41.667 0.00 0.00 0.00 4.04
3555 7716 5.240844 TGATGTGTGAGTAGTTTCTTCGAGA 59.759 40.000 0.00 0.00 0.00 4.04
3556 7717 4.856664 TGTGTGAGTAGTTTCTTCGAGAC 58.143 43.478 0.00 0.00 0.00 3.36
3557 7718 4.228317 GTGTGAGTAGTTTCTTCGAGACC 58.772 47.826 0.00 0.00 0.00 3.85
3558 7719 4.023021 GTGTGAGTAGTTTCTTCGAGACCT 60.023 45.833 0.00 0.00 0.00 3.85
3559 7720 5.180868 GTGTGAGTAGTTTCTTCGAGACCTA 59.819 44.000 0.00 0.00 0.00 3.08
3560 7721 5.180868 TGTGAGTAGTTTCTTCGAGACCTAC 59.819 44.000 0.00 0.15 32.89 3.18
3561 7722 4.391216 TGAGTAGTTTCTTCGAGACCTACG 59.609 45.833 0.00 0.00 35.60 3.51
3562 7723 3.688673 AGTAGTTTCTTCGAGACCTACGG 59.311 47.826 0.00 0.00 35.60 4.02
3563 7724 1.817447 AGTTTCTTCGAGACCTACGGG 59.183 52.381 0.00 0.00 38.88 5.28
3581 7742 5.157940 ACGGGTCGATAATAGTAGCTAGA 57.842 43.478 0.00 0.00 0.00 2.43
3584 7745 5.504337 CGGGTCGATAATAGTAGCTAGATGC 60.504 48.000 0.00 0.00 43.29 3.91
3589 7750 8.030106 GTCGATAATAGTAGCTAGATGCCTTTT 58.970 37.037 0.00 0.00 44.23 2.27
3591 7752 8.865001 CGATAATAGTAGCTAGATGCCTTTTTC 58.135 37.037 0.00 0.00 44.23 2.29
3599 7760 5.049828 GCTAGATGCCTTTTTCTCTCTCTC 58.950 45.833 0.00 0.00 35.15 3.20
3601 7762 5.343307 AGATGCCTTTTTCTCTCTCTCTC 57.657 43.478 0.00 0.00 0.00 3.20
3602 7763 3.971245 TGCCTTTTTCTCTCTCTCTCC 57.029 47.619 0.00 0.00 0.00 3.71
3603 7764 2.569404 TGCCTTTTTCTCTCTCTCTCCC 59.431 50.000 0.00 0.00 0.00 4.30
3605 7766 3.118775 GCCTTTTTCTCTCTCTCTCCCTC 60.119 52.174 0.00 0.00 0.00 4.30
3607 7768 4.777366 CCTTTTTCTCTCTCTCTCCCTCTT 59.223 45.833 0.00 0.00 0.00 2.85
3608 7769 5.248248 CCTTTTTCTCTCTCTCTCCCTCTTT 59.752 44.000 0.00 0.00 0.00 2.52
3609 7770 6.439058 CCTTTTTCTCTCTCTCTCCCTCTTTA 59.561 42.308 0.00 0.00 0.00 1.85
3610 7771 7.125659 CCTTTTTCTCTCTCTCTCCCTCTTTAT 59.874 40.741 0.00 0.00 0.00 1.40
3611 7772 7.654022 TTTTCTCTCTCTCTCCCTCTTTATC 57.346 40.000 0.00 0.00 0.00 1.75
3614 7775 6.601332 TCTCTCTCTCTCCCTCTTTATCTTC 58.399 44.000 0.00 0.00 0.00 2.87
3619 7780 8.472007 TCTCTCTCCCTCTTTATCTTCAATAC 57.528 38.462 0.00 0.00 0.00 1.89
3624 7785 8.992349 TCTCCCTCTTTATCTTCAATACAATGA 58.008 33.333 0.00 0.00 0.00 2.57
3652 7813 7.850935 TCTCTAAGATTACCCCGATGTAATT 57.149 36.000 9.82 0.00 40.57 1.40
3681 7842 2.870175 TGTGTTTGTTGGGATCCGATT 58.130 42.857 5.45 0.00 0.00 3.34
3686 7847 6.659668 TGTGTTTGTTGGGATCCGATTAATTA 59.340 34.615 5.45 0.00 0.00 1.40
3691 7852 3.963129 TGGGATCCGATTAATTATGGGC 58.037 45.455 5.45 0.00 32.47 5.36
3698 7859 7.012421 GGATCCGATTAATTATGGGCTTATGAC 59.988 40.741 0.00 0.00 32.47 3.06
3791 7952 2.036992 TCTCCGATCTACCCGTCTACTC 59.963 54.545 0.00 0.00 0.00 2.59
3822 7983 8.796475 CAAGTTAGATTGATTTTTCTTCAGGGA 58.204 33.333 0.00 0.00 31.55 4.20
3824 7985 8.797438 AGTTAGATTGATTTTTCTTCAGGGAAC 58.203 33.333 0.00 0.00 0.00 3.62
3859 8020 3.302365 AGGTTCAATTTTGCGGTGATG 57.698 42.857 0.00 0.00 0.00 3.07
3860 8021 2.627699 AGGTTCAATTTTGCGGTGATGT 59.372 40.909 0.00 0.00 0.00 3.06
3861 8022 2.986479 GGTTCAATTTTGCGGTGATGTC 59.014 45.455 0.00 0.00 0.00 3.06
3862 8023 3.551863 GGTTCAATTTTGCGGTGATGTCA 60.552 43.478 0.00 0.00 0.00 3.58
3927 8088 6.239402 GCTACTAAGGATAAAATGACGGGGTA 60.239 42.308 0.00 0.00 0.00 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 1.229359 CCCTGCCATCTTCCATGCT 59.771 57.895 0.00 0.00 0.00 3.79
6 7 0.327867 AGGATCCCTGCCATCTTCCA 60.328 55.000 8.55 0.00 29.57 3.53
7 8 1.734655 TAGGATCCCTGCCATCTTCC 58.265 55.000 8.55 0.00 34.61 3.46
10 11 2.061061 CCTTTAGGATCCCTGCCATCT 58.939 52.381 8.55 0.00 37.39 2.90
12 13 1.152649 CCCTTTAGGATCCCTGCCAT 58.847 55.000 8.55 0.00 38.24 4.40
13 14 1.645402 GCCCTTTAGGATCCCTGCCA 61.645 60.000 8.55 0.00 38.24 4.92
14 15 1.151679 GCCCTTTAGGATCCCTGCC 59.848 63.158 8.55 0.00 38.24 4.85
15 16 1.227973 CGCCCTTTAGGATCCCTGC 60.228 63.158 8.55 1.45 38.24 4.85
16 17 1.059913 ATCGCCCTTTAGGATCCCTG 58.940 55.000 8.55 0.00 38.24 4.45
17 18 1.059913 CATCGCCCTTTAGGATCCCT 58.940 55.000 8.55 0.00 38.24 4.20
18 19 0.036875 CCATCGCCCTTTAGGATCCC 59.963 60.000 8.55 0.00 38.24 3.85
19 20 0.036875 CCCATCGCCCTTTAGGATCC 59.963 60.000 2.48 2.48 38.24 3.36
20 21 0.765510 ACCCATCGCCCTTTAGGATC 59.234 55.000 0.00 0.00 38.24 3.36
21 22 0.765510 GACCCATCGCCCTTTAGGAT 59.234 55.000 0.00 0.00 38.24 3.24
22 23 1.342672 GGACCCATCGCCCTTTAGGA 61.343 60.000 0.00 0.00 38.24 2.94
23 24 1.148498 GGACCCATCGCCCTTTAGG 59.852 63.158 0.00 0.00 39.47 2.69
24 25 0.474184 ATGGACCCATCGCCCTTTAG 59.526 55.000 0.00 0.00 29.42 1.85
25 26 0.923358 AATGGACCCATCGCCCTTTA 59.077 50.000 1.48 0.00 35.31 1.85
26 27 0.684153 CAATGGACCCATCGCCCTTT 60.684 55.000 1.48 0.00 35.31 3.11
27 28 1.076777 CAATGGACCCATCGCCCTT 60.077 57.895 1.48 0.00 35.31 3.95
28 29 2.597340 CAATGGACCCATCGCCCT 59.403 61.111 1.48 0.00 35.31 5.19
29 30 2.519302 CCAATGGACCCATCGCCC 60.519 66.667 1.48 0.00 35.31 6.13
30 31 2.519302 CCCAATGGACCCATCGCC 60.519 66.667 0.00 0.00 35.31 5.54
31 32 2.519302 CCCCAATGGACCCATCGC 60.519 66.667 0.00 0.00 35.31 4.58
32 33 0.466189 CTTCCCCAATGGACCCATCG 60.466 60.000 0.00 0.00 45.11 3.84
33 34 0.631212 ACTTCCCCAATGGACCCATC 59.369 55.000 0.00 0.00 45.11 3.51
34 35 0.336048 CACTTCCCCAATGGACCCAT 59.664 55.000 0.00 0.00 45.11 4.00
35 36 1.773635 CACTTCCCCAATGGACCCA 59.226 57.895 0.00 0.00 45.11 4.51
36 37 1.682344 GCACTTCCCCAATGGACCC 60.682 63.158 0.00 0.00 45.11 4.46
37 38 0.623723 TAGCACTTCCCCAATGGACC 59.376 55.000 0.00 0.00 45.11 4.46
38 39 1.408822 CCTAGCACTTCCCCAATGGAC 60.409 57.143 0.00 0.00 45.11 4.02
39 40 0.918983 CCTAGCACTTCCCCAATGGA 59.081 55.000 0.00 0.00 43.18 3.41
40 41 0.106519 CCCTAGCACTTCCCCAATGG 60.107 60.000 0.00 0.00 0.00 3.16
41 42 0.753111 GCCCTAGCACTTCCCCAATG 60.753 60.000 0.00 0.00 39.53 2.82
42 43 1.615262 GCCCTAGCACTTCCCCAAT 59.385 57.895 0.00 0.00 39.53 3.16
43 44 2.966732 CGCCCTAGCACTTCCCCAA 61.967 63.158 0.00 0.00 39.83 4.12
44 45 3.399181 CGCCCTAGCACTTCCCCA 61.399 66.667 0.00 0.00 39.83 4.96
45 46 4.176752 CCGCCCTAGCACTTCCCC 62.177 72.222 0.00 0.00 39.83 4.81
46 47 4.176752 CCCGCCCTAGCACTTCCC 62.177 72.222 0.00 0.00 39.83 3.97
47 48 4.858680 GCCCGCCCTAGCACTTCC 62.859 72.222 0.00 0.00 39.83 3.46
60 61 2.607668 TACATTCTCGCACTCGCCCG 62.608 60.000 0.00 0.00 35.26 6.13
61 62 0.459585 TTACATTCTCGCACTCGCCC 60.460 55.000 0.00 0.00 35.26 6.13
62 63 0.645868 GTTACATTCTCGCACTCGCC 59.354 55.000 0.00 0.00 35.26 5.54
63 64 1.630148 AGTTACATTCTCGCACTCGC 58.370 50.000 0.00 0.00 35.26 5.03
64 65 3.106672 GGTAGTTACATTCTCGCACTCG 58.893 50.000 0.00 0.00 0.00 4.18
65 66 4.106029 TGGTAGTTACATTCTCGCACTC 57.894 45.455 0.00 0.00 0.00 3.51
66 67 3.762288 TCTGGTAGTTACATTCTCGCACT 59.238 43.478 0.00 0.00 0.00 4.40
67 68 4.106029 TCTGGTAGTTACATTCTCGCAC 57.894 45.455 0.00 0.00 0.00 5.34
68 69 4.794278 TTCTGGTAGTTACATTCTCGCA 57.206 40.909 0.00 0.00 0.00 5.10
69 70 6.305877 CGATATTCTGGTAGTTACATTCTCGC 59.694 42.308 0.00 0.00 0.00 5.03
70 71 6.305877 GCGATATTCTGGTAGTTACATTCTCG 59.694 42.308 0.00 0.00 0.00 4.04
71 72 6.586844 GGCGATATTCTGGTAGTTACATTCTC 59.413 42.308 0.00 0.00 0.00 2.87
72 73 6.041637 TGGCGATATTCTGGTAGTTACATTCT 59.958 38.462 0.00 0.00 0.00 2.40
73 74 6.220930 TGGCGATATTCTGGTAGTTACATTC 58.779 40.000 0.00 0.00 0.00 2.67
74 75 6.169557 TGGCGATATTCTGGTAGTTACATT 57.830 37.500 0.00 0.00 0.00 2.71
75 76 5.801531 TGGCGATATTCTGGTAGTTACAT 57.198 39.130 0.00 0.00 0.00 2.29
76 77 5.510690 CCATGGCGATATTCTGGTAGTTACA 60.511 44.000 0.00 0.00 0.00 2.41
77 78 4.929808 CCATGGCGATATTCTGGTAGTTAC 59.070 45.833 0.00 0.00 0.00 2.50
78 79 4.836175 TCCATGGCGATATTCTGGTAGTTA 59.164 41.667 6.96 0.00 0.00 2.24
79 80 3.646162 TCCATGGCGATATTCTGGTAGTT 59.354 43.478 6.96 0.00 0.00 2.24
80 81 3.239449 TCCATGGCGATATTCTGGTAGT 58.761 45.455 6.96 0.00 0.00 2.73
81 82 3.259374 ACTCCATGGCGATATTCTGGTAG 59.741 47.826 9.17 0.00 0.00 3.18
82 83 3.006859 CACTCCATGGCGATATTCTGGTA 59.993 47.826 9.17 0.00 0.00 3.25
83 84 2.050144 ACTCCATGGCGATATTCTGGT 58.950 47.619 9.17 0.00 0.00 4.00
84 85 2.420642 CACTCCATGGCGATATTCTGG 58.579 52.381 9.17 0.00 0.00 3.86
85 86 2.420642 CCACTCCATGGCGATATTCTG 58.579 52.381 9.17 0.00 43.24 3.02
86 87 2.847327 CCACTCCATGGCGATATTCT 57.153 50.000 9.17 0.00 43.24 2.40
96 97 2.593468 CTACGCCACCCCACTCCATG 62.593 65.000 0.00 0.00 0.00 3.66
97 98 2.285069 TACGCCACCCCACTCCAT 60.285 61.111 0.00 0.00 0.00 3.41
98 99 3.000819 CTACGCCACCCCACTCCA 61.001 66.667 0.00 0.00 0.00 3.86
99 100 4.468689 GCTACGCCACCCCACTCC 62.469 72.222 0.00 0.00 0.00 3.85
100 101 3.391382 AGCTACGCCACCCCACTC 61.391 66.667 0.00 0.00 0.00 3.51
101 102 3.706373 CAGCTACGCCACCCCACT 61.706 66.667 0.00 0.00 0.00 4.00
102 103 2.573609 CTACAGCTACGCCACCCCAC 62.574 65.000 0.00 0.00 0.00 4.61
103 104 2.284039 TACAGCTACGCCACCCCA 60.284 61.111 0.00 0.00 0.00 4.96
104 105 2.017559 CTCTACAGCTACGCCACCCC 62.018 65.000 0.00 0.00 0.00 4.95
105 106 1.321074 ACTCTACAGCTACGCCACCC 61.321 60.000 0.00 0.00 0.00 4.61
106 107 0.531200 AACTCTACAGCTACGCCACC 59.469 55.000 0.00 0.00 0.00 4.61
107 108 1.630148 CAACTCTACAGCTACGCCAC 58.370 55.000 0.00 0.00 0.00 5.01
108 109 0.530744 CCAACTCTACAGCTACGCCA 59.469 55.000 0.00 0.00 0.00 5.69
109 110 0.179108 CCCAACTCTACAGCTACGCC 60.179 60.000 0.00 0.00 0.00 5.68
110 111 0.531200 ACCCAACTCTACAGCTACGC 59.469 55.000 0.00 0.00 0.00 4.42
111 112 1.134560 GGACCCAACTCTACAGCTACG 59.865 57.143 0.00 0.00 0.00 3.51
112 113 2.176889 TGGACCCAACTCTACAGCTAC 58.823 52.381 0.00 0.00 0.00 3.58
113 114 2.615986 TGGACCCAACTCTACAGCTA 57.384 50.000 0.00 0.00 0.00 3.32
114 115 1.556911 CATGGACCCAACTCTACAGCT 59.443 52.381 0.00 0.00 0.00 4.24
115 116 1.279271 ACATGGACCCAACTCTACAGC 59.721 52.381 0.00 0.00 0.00 4.40
116 117 4.819105 TTACATGGACCCAACTCTACAG 57.181 45.455 0.00 0.00 0.00 2.74
117 118 5.772393 ATTTACATGGACCCAACTCTACA 57.228 39.130 0.00 0.00 0.00 2.74
118 119 5.944007 ACAATTTACATGGACCCAACTCTAC 59.056 40.000 0.00 0.00 0.00 2.59
119 120 6.134535 ACAATTTACATGGACCCAACTCTA 57.865 37.500 0.00 0.00 0.00 2.43
120 121 4.998051 ACAATTTACATGGACCCAACTCT 58.002 39.130 0.00 0.00 0.00 3.24
121 122 6.617879 GTTACAATTTACATGGACCCAACTC 58.382 40.000 0.00 0.00 0.00 3.01
122 123 5.182380 CGTTACAATTTACATGGACCCAACT 59.818 40.000 0.00 0.00 0.00 3.16
123 124 5.395642 CGTTACAATTTACATGGACCCAAC 58.604 41.667 0.00 0.00 0.00 3.77
124 125 4.082679 GCGTTACAATTTACATGGACCCAA 60.083 41.667 0.00 0.00 0.00 4.12
125 126 3.440872 GCGTTACAATTTACATGGACCCA 59.559 43.478 0.00 0.00 0.00 4.51
126 127 3.181494 GGCGTTACAATTTACATGGACCC 60.181 47.826 0.00 0.00 0.00 4.46
127 128 3.440872 TGGCGTTACAATTTACATGGACC 59.559 43.478 0.00 0.00 0.00 4.46
128 129 4.688511 TGGCGTTACAATTTACATGGAC 57.311 40.909 0.00 0.00 0.00 4.02
129 130 4.378563 CGTTGGCGTTACAATTTACATGGA 60.379 41.667 0.00 0.00 32.24 3.41
130 131 3.849145 CGTTGGCGTTACAATTTACATGG 59.151 43.478 0.00 0.00 32.24 3.66
147 148 2.411765 AAAGAGCCCCTCCACGTTGG 62.412 60.000 0.00 0.00 39.43 3.77
148 149 0.955919 GAAAGAGCCCCTCCACGTTG 60.956 60.000 0.00 0.00 0.00 4.10
149 150 1.375326 GAAAGAGCCCCTCCACGTT 59.625 57.895 0.00 0.00 0.00 3.99
150 151 2.593956 GGAAAGAGCCCCTCCACGT 61.594 63.158 0.00 0.00 0.00 4.49
151 152 2.269241 GGAAAGAGCCCCTCCACG 59.731 66.667 0.00 0.00 0.00 4.94
152 153 2.677848 GGGAAAGAGCCCCTCCAC 59.322 66.667 0.00 0.00 42.62 4.02
158 159 7.238710 TATTAAAGATAATGGGGAAAGAGCCC 58.761 38.462 0.00 0.00 38.74 5.19
159 160 8.885693 ATATTAAAGATAATGGGGAAAGAGCC 57.114 34.615 0.00 0.00 33.75 4.70
174 175 8.648097 CGAGCGTGCATACTTTATATTAAAGAT 58.352 33.333 12.63 1.78 0.00 2.40
175 176 7.650504 ACGAGCGTGCATACTTTATATTAAAGA 59.349 33.333 12.63 0.00 0.00 2.52
176 177 7.736017 CACGAGCGTGCATACTTTATATTAAAG 59.264 37.037 10.25 5.66 39.39 1.85
177 178 7.560700 CACGAGCGTGCATACTTTATATTAAA 58.439 34.615 10.25 0.00 39.39 1.52
178 179 7.100829 CACGAGCGTGCATACTTTATATTAA 57.899 36.000 10.25 0.00 39.39 1.40
179 180 6.684609 CACGAGCGTGCATACTTTATATTA 57.315 37.500 10.25 0.00 39.39 0.98
180 181 5.576337 CACGAGCGTGCATACTTTATATT 57.424 39.130 10.25 0.00 39.39 1.28
194 195 2.293677 TCTCAAATATGCACGAGCGT 57.706 45.000 4.63 4.63 46.23 5.07
195 196 3.656651 TTTCTCAAATATGCACGAGCG 57.343 42.857 0.00 0.00 46.23 5.03
223 224 0.030504 TGCAAGCAAACACCATCGTG 59.969 50.000 0.00 0.00 46.11 4.35
224 225 0.311790 CTGCAAGCAAACACCATCGT 59.688 50.000 0.00 0.00 0.00 3.73
225 226 0.592637 TCTGCAAGCAAACACCATCG 59.407 50.000 0.00 0.00 0.00 3.84
226 227 1.336240 GGTCTGCAAGCAAACACCATC 60.336 52.381 0.56 0.00 0.00 3.51
227 228 0.675633 GGTCTGCAAGCAAACACCAT 59.324 50.000 0.56 0.00 0.00 3.55
236 237 3.056328 GAACCCCGGTCTGCAAGC 61.056 66.667 0.00 0.00 0.00 4.01
259 260 1.174078 TGGTAACTCACTGCCGACGA 61.174 55.000 0.00 0.00 37.61 4.20
262 263 1.476891 GATCTGGTAACTCACTGCCGA 59.523 52.381 0.00 0.00 37.61 5.54
269 270 2.100197 CGGGTGAGATCTGGTAACTCA 58.900 52.381 0.00 0.00 38.16 3.41
275 276 2.450243 ACCCGGGTGAGATCTGGT 59.550 61.111 29.69 0.00 0.00 4.00
313 316 2.269241 GGCACTAGCACCCAGGAC 59.731 66.667 0.00 0.00 44.61 3.85
321 324 1.676678 GAGATCCGTGGGCACTAGCA 61.677 60.000 0.00 0.00 44.61 3.49
351 354 5.899318 TCGAGCAATGTTTAAAATTTTGCG 58.101 33.333 13.76 10.15 45.49 4.85
353 356 7.406799 ACCTCGAGCAATGTTTAAAATTTTG 57.593 32.000 13.76 0.00 0.00 2.44
413 416 7.364673 GGGTCAAATCTAAAGCCCAATTTATGT 60.365 37.037 0.00 0.00 36.25 2.29
419 422 4.059773 TGGGTCAAATCTAAAGCCCAAT 57.940 40.909 0.00 0.00 42.52 3.16
510 513 9.926158 AGCACATTCACAAAATATCAATGTTTA 57.074 25.926 0.00 0.00 35.89 2.01
680 690 1.571919 CAGGTGTATGCGGTTAGAGC 58.428 55.000 0.00 0.00 0.00 4.09
687 697 2.189521 GGGACCAGGTGTATGCGG 59.810 66.667 0.00 0.00 0.00 5.69
705 715 1.484653 CACGTGATTGGGACTATGGGA 59.515 52.381 10.90 0.00 0.00 4.37
706 716 1.953559 CACGTGATTGGGACTATGGG 58.046 55.000 10.90 0.00 0.00 4.00
707 717 1.299541 GCACGTGATTGGGACTATGG 58.700 55.000 22.23 0.00 0.00 2.74
708 718 2.022764 TGCACGTGATTGGGACTATG 57.977 50.000 22.23 0.00 0.00 2.23
710 720 2.011548 GCATGCACGTGATTGGGACTA 61.012 52.381 22.23 0.00 0.00 2.59
711 721 1.308069 GCATGCACGTGATTGGGACT 61.308 55.000 22.23 0.00 0.00 3.85
712 722 1.137404 GCATGCACGTGATTGGGAC 59.863 57.895 22.23 0.00 0.00 4.46
713 723 0.680601 ATGCATGCACGTGATTGGGA 60.681 50.000 25.37 6.67 0.00 4.37
758 768 2.190578 GCTCACCGGAGATTGGGG 59.809 66.667 9.46 0.00 44.26 4.96
807 817 0.394565 GTGGTGCTGTGGTCTCTTCT 59.605 55.000 0.00 0.00 0.00 2.85
919 938 1.460273 GGGGAGCGAGGCTAGAAGAG 61.460 65.000 0.00 0.00 39.88 2.85
920 939 1.455959 GGGGAGCGAGGCTAGAAGA 60.456 63.158 0.00 0.00 39.88 2.87
921 940 1.456705 AGGGGAGCGAGGCTAGAAG 60.457 63.158 0.00 0.00 39.88 2.85
922 941 1.455959 GAGGGGAGCGAGGCTAGAA 60.456 63.158 0.00 0.00 39.88 2.10
923 942 2.196229 GAGGGGAGCGAGGCTAGA 59.804 66.667 0.00 0.00 39.88 2.43
924 943 1.901464 GAGAGGGGAGCGAGGCTAG 60.901 68.421 0.00 0.00 39.88 3.42
925 944 2.196229 GAGAGGGGAGCGAGGCTA 59.804 66.667 0.00 0.00 39.88 3.93
926 945 4.851214 GGAGAGGGGAGCGAGGCT 62.851 72.222 0.00 0.00 43.88 4.58
932 951 3.412408 GTTGGGGGAGAGGGGAGC 61.412 72.222 0.00 0.00 0.00 4.70
933 952 2.692741 GGTTGGGGGAGAGGGGAG 60.693 72.222 0.00 0.00 0.00 4.30
934 953 3.216371 AGGTTGGGGGAGAGGGGA 61.216 66.667 0.00 0.00 0.00 4.81
935 954 2.692741 GAGGTTGGGGGAGAGGGG 60.693 72.222 0.00 0.00 0.00 4.79
936 955 1.308216 ATGAGGTTGGGGGAGAGGG 60.308 63.158 0.00 0.00 0.00 4.30
937 956 1.348775 GGATGAGGTTGGGGGAGAGG 61.349 65.000 0.00 0.00 0.00 3.69
938 957 1.348775 GGGATGAGGTTGGGGGAGAG 61.349 65.000 0.00 0.00 0.00 3.20
939 958 1.307866 GGGATGAGGTTGGGGGAGA 60.308 63.158 0.00 0.00 0.00 3.71
940 959 2.386935 GGGGATGAGGTTGGGGGAG 61.387 68.421 0.00 0.00 0.00 4.30
941 960 2.286885 GGGGATGAGGTTGGGGGA 60.287 66.667 0.00 0.00 0.00 4.81
1095 1146 2.581354 CTGGACTTCCTGGCCTCG 59.419 66.667 3.32 0.00 46.68 4.63
1122 1176 3.190849 TAGACGGAGCCGACGACG 61.191 66.667 16.83 0.00 42.83 5.12
1125 1179 2.403987 CAGTAGACGGAGCCGACG 59.596 66.667 16.83 0.00 42.83 5.12
1153 1207 1.338020 CTTGGAGAAGGTGTTGTTGGC 59.662 52.381 0.00 0.00 0.00 4.52
1204 1258 2.970974 GAAAGAGCAGGCCGTGTGC 61.971 63.158 7.36 7.36 41.54 4.57
1213 1267 0.179000 ATGGTAGCCGGAAAGAGCAG 59.821 55.000 5.05 0.00 0.00 4.24
1271 1325 4.442893 CCAGAGCAAACTAATCCACGGATA 60.443 45.833 0.00 0.00 33.97 2.59
1272 1326 3.535561 CAGAGCAAACTAATCCACGGAT 58.464 45.455 0.00 0.00 36.23 4.18
1273 1327 2.354704 CCAGAGCAAACTAATCCACGGA 60.355 50.000 0.00 0.00 0.00 4.69
1275 1329 2.673368 GTCCAGAGCAAACTAATCCACG 59.327 50.000 0.00 0.00 0.00 4.94
1276 1330 3.010420 GGTCCAGAGCAAACTAATCCAC 58.990 50.000 0.00 0.00 0.00 4.02
1277 1331 2.354704 CGGTCCAGAGCAAACTAATCCA 60.355 50.000 0.00 0.00 0.00 3.41
1279 1333 1.666189 GCGGTCCAGAGCAAACTAATC 59.334 52.381 0.00 0.00 0.00 1.75
1280 1334 1.003118 TGCGGTCCAGAGCAAACTAAT 59.997 47.619 0.00 0.00 40.78 1.73
1374 1438 4.828939 ACACCATGTGATTGACAAATCTGT 59.171 37.500 0.49 0.00 42.40 3.41
1392 1456 0.035317 AGCAAGAGATTCGCACACCA 59.965 50.000 0.00 0.00 0.00 4.17
1395 1459 2.168326 TTGAGCAAGAGATTCGCACA 57.832 45.000 0.00 0.00 0.00 4.57
1434 1498 4.158949 ACCAATAAAAGGGTACGGCAAATC 59.841 41.667 0.00 0.00 35.09 2.17
1440 1504 8.735692 TTATAGAAACCAATAAAAGGGTACGG 57.264 34.615 0.00 0.00 36.05 4.02
1470 1534 4.227300 TGTGCCTACTTATCAATTCCCAGT 59.773 41.667 0.00 0.00 0.00 4.00
1494 1558 1.231958 TTTACGCCGAAGCAACCTGG 61.232 55.000 0.00 0.00 39.83 4.45
1497 1561 0.589708 ACTTTTACGCCGAAGCAACC 59.410 50.000 0.00 0.00 39.83 3.77
1576 1641 2.999355 GCTCAATGTCTCCTCAGTTCAC 59.001 50.000 0.00 0.00 0.00 3.18
1586 1651 5.703130 AGGTTAAAAGTCTGCTCAATGTCTC 59.297 40.000 0.00 0.00 0.00 3.36
1599 1664 7.801783 GTGTTAGTACAATGCAGGTTAAAAGTC 59.198 37.037 0.00 0.00 35.69 3.01
1621 1686 3.832615 ACTTCCTCCTGTAAACGTGTT 57.167 42.857 0.00 0.00 0.00 3.32
1632 1697 2.569404 CAGCCAAGAACTACTTCCTCCT 59.431 50.000 0.00 0.00 36.61 3.69
1673 1738 3.124636 CGACTGGCACACCTTGTAATTAC 59.875 47.826 8.75 8.75 36.63 1.89
1685 1750 3.545574 TGGCACTCGACTGGCACA 61.546 61.111 15.60 2.34 41.52 4.57
1690 1755 3.171987 GCATGTGGCACTCGACTG 58.828 61.111 19.83 9.32 43.97 3.51
1700 1765 7.336931 ACTTCTTTTAAGGTAGTATGCATGTGG 59.663 37.037 10.16 0.00 0.00 4.17
1714 1997 9.738832 GAGTACAGATAGCTACTTCTTTTAAGG 57.261 37.037 0.00 0.00 0.00 2.69
1728 2011 7.228507 TCAGAAAGAGATGAGAGTACAGATAGC 59.771 40.741 0.00 0.00 0.00 2.97
1729 2012 8.675705 TCAGAAAGAGATGAGAGTACAGATAG 57.324 38.462 0.00 0.00 0.00 2.08
1730 2013 9.119418 CTTCAGAAAGAGATGAGAGTACAGATA 57.881 37.037 0.00 0.00 34.14 1.98
1733 2016 7.389803 TCTTCAGAAAGAGATGAGAGTACAG 57.610 40.000 0.00 0.00 36.59 2.74
1794 2163 0.447801 GTAGCAACCTGGCATGTTCG 59.552 55.000 5.11 3.53 35.83 3.95
1828 2197 2.740055 CGACACCACAGGCAGAGC 60.740 66.667 0.00 0.00 0.00 4.09
1838 2207 1.538204 GCTGAGACTTGAACGACACCA 60.538 52.381 0.00 0.00 0.00 4.17
1849 2218 1.696336 ACATGGTCACAGCTGAGACTT 59.304 47.619 33.53 22.67 36.20 3.01
1851 2220 3.533606 ATACATGGTCACAGCTGAGAC 57.466 47.619 29.53 29.53 35.37 3.36
1874 2243 8.193953 TCATATCAGGCATAACATTCTAGTGA 57.806 34.615 0.00 0.00 0.00 3.41
1913 2282 5.811190 TCTGGGGTTCATATTCGAGAAAAA 58.189 37.500 0.00 0.00 0.00 1.94
1914 2283 5.428253 CTCTGGGGTTCATATTCGAGAAAA 58.572 41.667 0.00 0.00 0.00 2.29
1915 2284 4.141711 CCTCTGGGGTTCATATTCGAGAAA 60.142 45.833 0.00 0.00 0.00 2.52
1916 2285 3.388024 CCTCTGGGGTTCATATTCGAGAA 59.612 47.826 0.00 0.00 0.00 2.87
1917 2286 2.965831 CCTCTGGGGTTCATATTCGAGA 59.034 50.000 0.00 0.00 0.00 4.04
1918 2287 2.548920 GCCTCTGGGGTTCATATTCGAG 60.549 54.545 0.00 0.00 37.43 4.04
1919 2288 1.416401 GCCTCTGGGGTTCATATTCGA 59.584 52.381 0.00 0.00 37.43 3.71
1920 2289 1.140852 TGCCTCTGGGGTTCATATTCG 59.859 52.381 0.00 0.00 37.43 3.34
1921 2290 3.515602 ATGCCTCTGGGGTTCATATTC 57.484 47.619 0.00 0.00 37.43 1.75
1922 2291 3.979501 AATGCCTCTGGGGTTCATATT 57.020 42.857 0.00 0.00 37.43 1.28
1923 2292 3.331889 CCTAATGCCTCTGGGGTTCATAT 59.668 47.826 0.00 0.00 37.43 1.78
1924 2293 2.711009 CCTAATGCCTCTGGGGTTCATA 59.289 50.000 0.00 0.00 37.43 2.15
1925 2294 1.496429 CCTAATGCCTCTGGGGTTCAT 59.504 52.381 0.00 0.00 37.43 2.57
1926 2295 0.918983 CCTAATGCCTCTGGGGTTCA 59.081 55.000 0.00 0.00 37.43 3.18
1927 2296 0.466372 GCCTAATGCCTCTGGGGTTC 60.466 60.000 0.00 0.00 37.43 3.62
1928 2297 1.214305 TGCCTAATGCCTCTGGGGTT 61.214 55.000 0.00 0.00 40.16 4.11
1929 2298 0.995675 ATGCCTAATGCCTCTGGGGT 60.996 55.000 0.00 0.00 40.16 4.95
1930 2299 0.538977 CATGCCTAATGCCTCTGGGG 60.539 60.000 0.00 0.00 40.16 4.96
1931 2300 3.031916 CATGCCTAATGCCTCTGGG 57.968 57.895 0.00 0.00 40.16 4.45
1939 2308 5.104374 CCAGTTAAAACAGCATGCCTAATG 58.896 41.667 15.66 8.72 42.53 1.90
1940 2309 5.016173 TCCAGTTAAAACAGCATGCCTAAT 58.984 37.500 15.66 0.00 42.53 1.73
1941 2310 4.217550 GTCCAGTTAAAACAGCATGCCTAA 59.782 41.667 15.66 2.03 42.53 2.69
1949 2318 7.078228 CAGTTATTCTGTCCAGTTAAAACAGC 58.922 38.462 0.00 0.00 40.15 4.40
1957 2326 3.678056 TCGCAGTTATTCTGTCCAGTT 57.322 42.857 0.00 0.00 45.23 3.16
1975 2405 2.485426 AGTGCCAACATTGTTCAGATCG 59.515 45.455 0.00 0.00 0.00 3.69
2027 2457 7.433719 TGAAAGTTTAAGTAGCAACGTAACGTA 59.566 33.333 0.00 0.00 39.99 3.57
2028 2458 6.255453 TGAAAGTTTAAGTAGCAACGTAACGT 59.745 34.615 0.00 0.00 43.97 3.99
2029 2459 6.639212 TGAAAGTTTAAGTAGCAACGTAACG 58.361 36.000 0.00 0.00 30.66 3.18
2030 2460 7.067728 CCTGAAAGTTTAAGTAGCAACGTAAC 58.932 38.462 0.00 0.00 30.66 2.50
2031 2461 6.762661 ACCTGAAAGTTTAAGTAGCAACGTAA 59.237 34.615 0.00 0.00 0.00 3.18
2055 2485 6.322491 GTTCATTGCAAACTATGGAACCTAC 58.678 40.000 1.71 0.00 42.55 3.18
2056 2486 5.417580 GGTTCATTGCAAACTATGGAACCTA 59.582 40.000 23.98 0.00 42.55 3.08
2057 2487 4.220602 GGTTCATTGCAAACTATGGAACCT 59.779 41.667 23.98 0.00 42.55 3.50
2058 2488 4.494484 GGTTCATTGCAAACTATGGAACC 58.506 43.478 20.38 20.38 42.55 3.62
2060 2490 4.155709 TGGGTTCATTGCAAACTATGGAA 58.844 39.130 1.71 0.00 43.98 3.53
2062 2492 3.763360 TCTGGGTTCATTGCAAACTATGG 59.237 43.478 1.71 0.00 30.96 2.74
2063 2493 5.163513 GTTCTGGGTTCATTGCAAACTATG 58.836 41.667 1.71 0.00 0.00 2.23
2064 2494 4.220602 GGTTCTGGGTTCATTGCAAACTAT 59.779 41.667 1.71 0.00 0.00 2.12
2142 2578 4.307032 AGTTCAGGGTTCATTGCAGTAT 57.693 40.909 0.00 0.00 0.00 2.12
2146 2582 4.574674 ATCTAGTTCAGGGTTCATTGCA 57.425 40.909 0.00 0.00 0.00 4.08
2156 2592 1.859080 GCGGCGTTAATCTAGTTCAGG 59.141 52.381 9.37 0.00 0.00 3.86
2163 2599 1.552226 CAAGTCGCGGCGTTAATCTA 58.448 50.000 22.90 0.00 0.00 1.98
2176 2612 1.159285 TTGAGAATGCTGCCAAGTCG 58.841 50.000 0.00 0.00 0.00 4.18
2182 2618 2.494870 ACCAGAATTTGAGAATGCTGCC 59.505 45.455 0.00 0.00 44.49 4.85
2189 2625 6.376864 TGAACAGAAACACCAGAATTTGAGAA 59.623 34.615 0.00 0.00 0.00 2.87
2190 2626 5.885352 TGAACAGAAACACCAGAATTTGAGA 59.115 36.000 0.00 0.00 0.00 3.27
2191 2627 6.135290 TGAACAGAAACACCAGAATTTGAG 57.865 37.500 0.00 0.00 0.00 3.02
2192 2628 6.547141 AGATGAACAGAAACACCAGAATTTGA 59.453 34.615 0.00 0.00 0.00 2.69
2193 2629 6.742109 AGATGAACAGAAACACCAGAATTTG 58.258 36.000 0.00 0.00 0.00 2.32
2194 2630 6.966534 AGATGAACAGAAACACCAGAATTT 57.033 33.333 0.00 0.00 0.00 1.82
2195 2631 6.966534 AAGATGAACAGAAACACCAGAATT 57.033 33.333 0.00 0.00 0.00 2.17
2196 2632 6.966534 AAAGATGAACAGAAACACCAGAAT 57.033 33.333 0.00 0.00 0.00 2.40
2197 2633 6.376864 TCAAAAGATGAACAGAAACACCAGAA 59.623 34.615 0.00 0.00 34.30 3.02
2198 2634 5.885352 TCAAAAGATGAACAGAAACACCAGA 59.115 36.000 0.00 0.00 34.30 3.86
2199 2635 6.135290 TCAAAAGATGAACAGAAACACCAG 57.865 37.500 0.00 0.00 34.30 4.00
2200 2636 6.522625 TTCAAAAGATGAACAGAAACACCA 57.477 33.333 0.00 0.00 43.08 4.17
2214 2650 9.696917 GGTCTGAATTATTTGTGTTCAAAAGAT 57.303 29.630 0.00 0.00 44.97 2.40
2218 2654 7.286546 TCAGGGTCTGAATTATTTGTGTTCAAA 59.713 33.333 0.00 0.00 41.10 2.69
2219 2655 6.775142 TCAGGGTCTGAATTATTTGTGTTCAA 59.225 34.615 0.00 0.00 37.57 2.69
2221 2657 6.817765 TCAGGGTCTGAATTATTTGTGTTC 57.182 37.500 0.00 0.00 37.57 3.18
2294 2731 2.507452 CGAGCCCCTGCATCATCA 59.493 61.111 0.00 0.00 41.13 3.07
2973 3435 6.446318 AGCAAGAAATGAAAAATCTAACGCA 58.554 32.000 0.00 0.00 0.00 5.24
2975 3437 8.420189 GTCAAGCAAGAAATGAAAAATCTAACG 58.580 33.333 0.00 0.00 0.00 3.18
3022 3511 0.521291 ATGGACAATGGCAACGAACG 59.479 50.000 0.00 0.00 42.51 3.95
3046 3535 1.872952 CATCAGGTCAACGAACAGCAA 59.127 47.619 0.00 0.00 0.00 3.91
3124 3619 3.614092 TGCAAATTGGGCAACTGAAAAA 58.386 36.364 2.79 0.00 38.54 1.94
3161 3656 2.738846 GTTAGAGACATGTGTGCACCTG 59.261 50.000 15.69 11.70 33.90 4.00
3178 7202 4.212214 GCTCTATTTCCAGCAATCGGTTAG 59.788 45.833 0.00 0.00 35.56 2.34
3224 7248 3.181431 CCTTACTAGGATCCGAGGGAAGA 60.181 52.174 26.65 10.57 45.05 2.87
3229 7253 1.996798 TGCCTTACTAGGATCCGAGG 58.003 55.000 23.89 18.07 45.05 4.63
3246 7270 2.558359 ACAAAATCCTACTGGCTGTTGC 59.442 45.455 1.31 0.00 38.76 4.17
3254 7278 3.667960 GCGTGCTTGACAAAATCCTACTG 60.668 47.826 0.00 0.00 0.00 2.74
3310 7334 0.745845 GGCATACACACAGAGCTGGG 60.746 60.000 0.00 0.00 40.54 4.45
3317 7341 2.677971 GCTACCGGCATACACACAG 58.322 57.895 0.00 0.00 41.35 3.66
3329 7353 4.913335 TCTTAGTTAGGTCATGCTACCG 57.087 45.455 0.00 0.00 44.77 4.02
3372 7405 3.555168 CCTTTGTAGGAGTGTCCACAGAC 60.555 52.174 0.00 0.00 45.05 3.51
3438 7596 0.472471 TATTCAGGGGGCGAATGTCC 59.528 55.000 0.00 0.00 40.02 4.02
3448 7609 2.037772 CCAACGAGGAGATATTCAGGGG 59.962 54.545 0.00 0.00 41.22 4.79
3500 7661 4.262164 GGCAACAAAGTTGATGAAGATGGT 60.262 41.667 13.58 0.00 33.35 3.55
3512 7673 3.499338 TCATCATGGAGGCAACAAAGTT 58.501 40.909 0.00 0.00 41.41 2.66
3515 7676 3.193903 CACATCATCATGGAGGCAACAAA 59.806 43.478 0.00 0.00 34.30 2.83
3519 7680 2.026075 TCACACATCATCATGGAGGCAA 60.026 45.455 0.00 0.00 33.82 4.52
3524 7685 5.682234 AACTACTCACACATCATCATGGA 57.318 39.130 0.00 0.00 33.82 3.41
3526 7687 7.463780 CGAAGAAACTACTCACACATCATCATG 60.464 40.741 0.00 0.00 35.92 3.07
3527 7688 6.533012 CGAAGAAACTACTCACACATCATCAT 59.467 38.462 0.00 0.00 0.00 2.45
3528 7689 5.863935 CGAAGAAACTACTCACACATCATCA 59.136 40.000 0.00 0.00 0.00 3.07
3529 7690 6.093404 TCGAAGAAACTACTCACACATCATC 58.907 40.000 0.00 0.00 0.00 2.92
3530 7691 6.025749 TCGAAGAAACTACTCACACATCAT 57.974 37.500 0.00 0.00 0.00 2.45
3531 7692 5.240844 TCTCGAAGAAACTACTCACACATCA 59.759 40.000 0.00 0.00 34.09 3.07
3532 7693 5.569823 GTCTCGAAGAAACTACTCACACATC 59.430 44.000 0.00 0.00 34.09 3.06
3533 7694 5.462405 GTCTCGAAGAAACTACTCACACAT 58.538 41.667 0.00 0.00 34.09 3.21
3534 7695 4.261489 GGTCTCGAAGAAACTACTCACACA 60.261 45.833 0.00 0.00 34.09 3.72
3535 7696 4.023021 AGGTCTCGAAGAAACTACTCACAC 60.023 45.833 0.00 0.00 34.09 3.82
3536 7697 4.142790 AGGTCTCGAAGAAACTACTCACA 58.857 43.478 0.00 0.00 34.09 3.58
3537 7698 4.769859 AGGTCTCGAAGAAACTACTCAC 57.230 45.455 0.00 0.00 34.09 3.51
3538 7699 4.391216 CGTAGGTCTCGAAGAAACTACTCA 59.609 45.833 12.74 0.00 36.04 3.41
3539 7700 4.896080 CGTAGGTCTCGAAGAAACTACTC 58.104 47.826 12.74 0.00 36.04 2.59
3540 7701 4.943142 CGTAGGTCTCGAAGAAACTACT 57.057 45.455 12.74 0.00 36.04 2.57
3557 7718 6.336566 TCTAGCTACTATTATCGACCCGTAG 58.663 44.000 0.00 0.00 0.00 3.51
3558 7719 6.286240 TCTAGCTACTATTATCGACCCGTA 57.714 41.667 0.00 0.00 0.00 4.02
3559 7720 5.157940 TCTAGCTACTATTATCGACCCGT 57.842 43.478 0.00 0.00 0.00 5.28
3560 7721 5.504337 GCATCTAGCTACTATTATCGACCCG 60.504 48.000 0.00 0.00 41.15 5.28
3561 7722 5.221087 GGCATCTAGCTACTATTATCGACCC 60.221 48.000 0.00 0.00 44.79 4.46
3562 7723 5.591067 AGGCATCTAGCTACTATTATCGACC 59.409 44.000 0.00 0.00 44.79 4.79
3563 7724 6.687081 AGGCATCTAGCTACTATTATCGAC 57.313 41.667 0.00 0.00 44.79 4.20
3564 7725 7.704578 AAAGGCATCTAGCTACTATTATCGA 57.295 36.000 0.00 0.00 44.79 3.59
3565 7726 8.764524 AAAAAGGCATCTAGCTACTATTATCG 57.235 34.615 0.00 0.00 44.79 2.92
3566 7727 9.936759 AGAAAAAGGCATCTAGCTACTATTATC 57.063 33.333 0.00 0.00 44.79 1.75
3567 7728 9.936759 GAGAAAAAGGCATCTAGCTACTATTAT 57.063 33.333 0.00 0.00 44.79 1.28
3568 7729 9.148879 AGAGAAAAAGGCATCTAGCTACTATTA 57.851 33.333 0.00 0.00 44.79 0.98
3576 7737 5.022282 AGAGAGAGAAAAAGGCATCTAGC 57.978 43.478 0.00 0.00 44.65 3.42
3581 7742 3.199727 GGGAGAGAGAGAGAAAAAGGCAT 59.800 47.826 0.00 0.00 0.00 4.40
3584 7745 4.352893 AGAGGGAGAGAGAGAGAAAAAGG 58.647 47.826 0.00 0.00 0.00 3.11
3589 7750 6.590656 AGATAAAGAGGGAGAGAGAGAGAA 57.409 41.667 0.00 0.00 0.00 2.87
3591 7752 6.364701 TGAAGATAAAGAGGGAGAGAGAGAG 58.635 44.000 0.00 0.00 0.00 3.20
3599 7760 9.790344 ATCATTGTATTGAAGATAAAGAGGGAG 57.210 33.333 0.00 0.00 0.00 4.30
3601 7762 9.790344 AGATCATTGTATTGAAGATAAAGAGGG 57.210 33.333 0.00 0.00 0.00 4.30
3652 7813 2.932614 CCCAACAAACACATCGCAAAAA 59.067 40.909 0.00 0.00 0.00 1.94
3681 7842 9.905713 GATAATCTGGTCATAAGCCCATAATTA 57.094 33.333 0.00 0.00 0.00 1.40
3686 7847 4.603171 TGGATAATCTGGTCATAAGCCCAT 59.397 41.667 0.00 0.00 0.00 4.00
3763 7924 4.664392 ACGGGTAGATCGGAGAGAAATAT 58.336 43.478 0.00 0.00 43.63 1.28
3771 7932 2.037511 AGAGTAGACGGGTAGATCGGAG 59.962 54.545 0.00 0.00 0.00 4.63
3774 7935 2.144730 CCAGAGTAGACGGGTAGATCG 58.855 57.143 0.00 0.00 0.00 3.69
3781 7942 1.258445 ACTTGGCCAGAGTAGACGGG 61.258 60.000 16.08 0.00 0.00 5.28
3791 7952 6.928520 AGAAAAATCAATCTAACTTGGCCAG 58.071 36.000 5.11 2.72 0.00 4.85
3822 7983 3.012934 ACCTACCACAAAGCACTTGTT 57.987 42.857 1.70 0.00 46.49 2.83
3824 7985 2.948979 TGAACCTACCACAAAGCACTTG 59.051 45.455 0.00 0.00 41.19 3.16
3860 8021 5.945784 CCTTATCCTTTTTGTCAGTGGATGA 59.054 40.000 0.00 0.00 37.96 2.92
3861 8022 5.126061 CCCTTATCCTTTTTGTCAGTGGATG 59.874 44.000 0.00 0.00 37.96 3.51
3862 8023 5.264395 CCCTTATCCTTTTTGTCAGTGGAT 58.736 41.667 0.00 0.00 40.26 3.41
3873 8034 8.641541 CAATACAATATGTGCCCTTATCCTTTT 58.358 33.333 0.00 0.00 0.00 2.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.