Multiple sequence alignment - TraesCS5D01G293800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G293800 chr5D 100.000 4324 0 0 1 4324 390574147 390569824 0.000000e+00 7986.0
1 TraesCS5D01G293800 chr5D 79.710 207 36 6 1184 1387 527842124 527841921 1.250000e-30 145.0
2 TraesCS5D01G293800 chr5D 79.279 111 21 2 504 613 293539465 293539356 4.640000e-10 76.8
3 TraesCS5D01G293800 chr5D 79.365 126 7 6 2898 3014 443065541 443065426 2.160000e-08 71.3
4 TraesCS5D01G293800 chr5B 92.934 2788 121 28 807 3551 470979167 470976413 0.000000e+00 3988.0
5 TraesCS5D01G293800 chr5B 86.413 368 28 11 473 824 470979826 470979465 2.440000e-102 383.0
6 TraesCS5D01G293800 chr5B 81.643 207 28 8 2255 2453 539308729 539308525 3.460000e-36 163.0
7 TraesCS5D01G293800 chr5B 80.000 125 7 3 2899 3014 539308404 539308289 4.640000e-10 76.8
8 TraesCS5D01G293800 chr5A 94.802 2097 85 14 1490 3573 493866429 493864344 0.000000e+00 3247.0
9 TraesCS5D01G293800 chr5A 96.000 700 23 3 762 1460 493867123 493866428 0.000000e+00 1133.0
10 TraesCS5D01G293800 chr5A 86.933 727 71 19 2 716 493867851 493867137 0.000000e+00 795.0
11 TraesCS5D01G293800 chr5A 92.150 293 20 1 3638 3927 493863682 493863390 1.120000e-110 411.0
12 TraesCS5D01G293800 chr5A 88.991 218 6 6 3921 4138 493859497 493859298 2.000000e-63 254.0
13 TraesCS5D01G293800 chr5A 86.000 100 3 5 2255 2343 559091791 559091692 3.560000e-16 97.1
14 TraesCS5D01G293800 chr5A 100.000 34 0 0 2898 2931 559090616 559090583 3.610000e-06 63.9
15 TraesCS5D01G293800 chr3D 79.951 1227 167 40 2208 3375 509229847 509231053 0.000000e+00 830.0
16 TraesCS5D01G293800 chr3D 93.564 404 24 2 997 1399 509228731 509229133 6.190000e-168 601.0
17 TraesCS5D01G293800 chr3D 87.629 194 17 4 4138 4324 607983408 607983601 7.280000e-53 219.0
18 TraesCS5D01G293800 chr3B 80.773 1061 158 25 2346 3375 671997658 671998703 0.000000e+00 787.0
19 TraesCS5D01G293800 chr3B 93.548 403 26 0 997 1399 671996337 671996739 6.190000e-168 601.0
20 TraesCS5D01G293800 chr3A 93.564 404 24 2 997 1399 646812079 646812481 6.190000e-168 601.0
21 TraesCS5D01G293800 chr3A 82.492 594 66 22 2209 2770 646813217 646813804 1.810000e-133 486.0
22 TraesCS5D01G293800 chr2D 82.045 440 52 19 2231 2647 29676414 29675979 2.470000e-92 350.0
23 TraesCS5D01G293800 chr2D 82.394 426 51 18 2231 2635 571963619 571964041 2.470000e-92 350.0
24 TraesCS5D01G293800 chr1D 82.045 440 52 18 2231 2647 359550205 359549770 2.470000e-92 350.0
25 TraesCS5D01G293800 chr4B 80.806 422 54 18 2231 2629 41178164 41178581 5.430000e-79 305.0
26 TraesCS5D01G293800 chr4B 100.000 29 0 0 572 600 641589219 641589191 2.000000e-03 54.7
27 TraesCS5D01G293800 chr4B 100.000 29 0 0 572 600 641629573 641629545 2.000000e-03 54.7
28 TraesCS5D01G293800 chr4B 100.000 29 0 0 572 600 641665567 641665539 2.000000e-03 54.7
29 TraesCS5D01G293800 chr4B 100.000 29 0 0 572 600 641705802 641705774 2.000000e-03 54.7
30 TraesCS5D01G293800 chr4B 100.000 29 0 0 572 600 641758169 641758141 2.000000e-03 54.7
31 TraesCS5D01G293800 chr6A 89.062 192 15 2 4138 4324 54489011 54489201 2.600000e-57 233.0
32 TraesCS5D01G293800 chr2B 87.310 197 19 2 4133 4324 84797238 84797433 2.020000e-53 220.0
33 TraesCS5D01G293800 chr2B 84.375 192 25 1 4138 4324 690727137 690727328 2.660000e-42 183.0
34 TraesCS5D01G293800 chr1B 87.958 191 18 3 4139 4324 518183783 518183593 2.020000e-53 220.0
35 TraesCS5D01G293800 chr1B 86.979 192 17 5 4138 4324 477515249 477515437 4.380000e-50 209.0
36 TraesCS5D01G293800 chr1B 86.387 191 19 4 4139 4324 175155735 175155923 7.330000e-48 202.0
37 TraesCS5D01G293800 chr1B 84.615 91 13 1 1270 1359 628218971 628219061 5.960000e-14 89.8
38 TraesCS5D01G293800 chr2A 87.500 192 17 3 4139 4324 531599277 531599467 9.420000e-52 215.0
39 TraesCS5D01G293800 chr1A 85.000 200 22 4 4132 4324 242837254 242837452 3.410000e-46 196.0
40 TraesCS5D01G293800 chr7A 77.778 207 40 6 1184 1387 459210136 459209933 5.870000e-24 122.0
41 TraesCS5D01G293800 chr4D 78.392 199 29 9 10 205 379158750 379158563 2.730000e-22 117.0
42 TraesCS5D01G293800 chr7B 76.923 208 40 8 1184 1387 411059978 411059775 1.270000e-20 111.0
43 TraesCS5D01G293800 chr6D 83.636 110 16 2 488 596 277059250 277059358 7.650000e-18 102.0
44 TraesCS5D01G293800 chrUn 92.105 38 3 0 563 600 337385479 337385516 2.000000e-03 54.7
45 TraesCS5D01G293800 chrUn 100.000 29 0 0 572 600 353374429 353374401 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G293800 chr5D 390569824 390574147 4323 True 7986.0 7986 100.0000 1 4324 1 chr5D.!!$R2 4323
1 TraesCS5D01G293800 chr5B 470976413 470979826 3413 True 2185.5 3988 89.6735 473 3551 2 chr5B.!!$R1 3078
2 TraesCS5D01G293800 chr5A 493859298 493867851 8553 True 1168.0 3247 91.7752 2 4138 5 chr5A.!!$R1 4136
3 TraesCS5D01G293800 chr3D 509228731 509231053 2322 False 715.5 830 86.7575 997 3375 2 chr3D.!!$F2 2378
4 TraesCS5D01G293800 chr3B 671996337 671998703 2366 False 694.0 787 87.1605 997 3375 2 chr3B.!!$F1 2378
5 TraesCS5D01G293800 chr3A 646812079 646813804 1725 False 543.5 601 88.0280 997 2770 2 chr3A.!!$F1 1773

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
329 332 0.039180 TTGAGGGTCCGCACTAGAGA 59.961 55.0 0.0 0.0 0.00 3.10 F
1474 1876 0.039074 GATCCCATCGAATCGAGCGT 60.039 55.0 12.0 0.0 39.91 5.07 F
2969 3670 0.321298 ATTTCCGTGGAGTTGTCCCG 60.321 55.0 0.0 0.0 43.15 5.14 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2148 2783 0.319555 CACCTGCTTCTCCGTTTCGA 60.320 55.0 0.0 0.0 0.00 3.71 R
3129 3844 0.881118 GCACGAAAAAGGGCATGAGA 59.119 50.0 0.0 0.0 40.96 3.27 R
4282 9522 0.104672 TCCACCCAGGTTCTTCCAGA 60.105 55.0 0.0 0.0 39.02 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 2.295070 CGACGAAAAAGGGTGGGAATTT 59.705 45.455 0.00 0.00 0.00 1.82
63 64 2.813907 TGGAAGAGGAGAGAGTTGAGG 58.186 52.381 0.00 0.00 0.00 3.86
77 78 4.759183 AGAGTTGAGGAAGAGTGATTTTGC 59.241 41.667 0.00 0.00 0.00 3.68
97 99 2.745884 CGGAATCAGTGCGGCCAA 60.746 61.111 2.24 0.00 37.43 4.52
108 110 2.179018 CGGCCAACTCCAAATGCG 59.821 61.111 2.24 0.00 0.00 4.73
109 111 2.625823 CGGCCAACTCCAAATGCGT 61.626 57.895 2.24 0.00 0.00 5.24
115 117 1.244019 AACTCCAAATGCGTGGGCTC 61.244 55.000 1.45 0.00 39.34 4.70
117 119 3.814268 CCAAATGCGTGGGCTCCG 61.814 66.667 0.00 0.00 40.82 4.63
128 130 4.653555 GGCTCCGCCTTTGTTTTG 57.346 55.556 0.00 0.00 46.69 2.44
137 139 1.413118 CCTTTGTTTTGGGTGGCTCT 58.587 50.000 0.00 0.00 0.00 4.09
148 150 2.203640 TGGCTCTGGAGTGTCGGT 60.204 61.111 0.00 0.00 0.00 4.69
165 167 0.968405 GGTGTCCTACGTGGTTGGTA 59.032 55.000 0.00 0.00 37.07 3.25
170 172 0.103572 CCTACGTGGTTGGTATCCGG 59.896 60.000 0.00 0.00 0.00 5.14
199 201 1.664956 AAGCCCCCTGGTTTGGTTCT 61.665 55.000 0.00 0.00 33.24 3.01
209 212 2.244695 GGTTTGGTTCTAGTTTGGGGG 58.755 52.381 0.00 0.00 0.00 5.40
233 236 1.509703 GAAAGTCCGAACTGGTCCAC 58.490 55.000 0.00 0.00 39.52 4.02
296 299 2.793946 GCATCGCGCAGTTTGGAT 59.206 55.556 8.75 0.00 41.79 3.41
297 300 1.584483 GCATCGCGCAGTTTGGATG 60.584 57.895 8.75 12.15 41.79 3.51
301 304 0.176910 TCGCGCAGTTTGGATGGATA 59.823 50.000 8.75 0.00 0.00 2.59
302 305 0.304705 CGCGCAGTTTGGATGGATAC 59.695 55.000 8.75 0.00 0.00 2.24
304 307 1.934589 CGCAGTTTGGATGGATACGA 58.065 50.000 0.00 0.00 42.51 3.43
325 328 0.834687 AGGTTTGAGGGTCCGCACTA 60.835 55.000 0.00 0.00 0.00 2.74
329 332 0.039180 TTGAGGGTCCGCACTAGAGA 59.961 55.000 0.00 0.00 0.00 3.10
369 372 2.984471 TGTAGATTTGTCTCGTCGCAAC 59.016 45.455 0.00 0.00 0.00 4.17
384 387 3.615496 GTCGCAACGGTTGATATACACTT 59.385 43.478 24.20 0.00 0.00 3.16
441 444 6.978659 TCTAACTGAGCGTAATTTAGATGGTG 59.021 38.462 0.00 0.00 0.00 4.17
447 450 6.207810 TGAGCGTAATTTAGATGGTGGTTTTT 59.792 34.615 0.00 0.00 0.00 1.94
468 471 5.517322 TTTTGTTGTGGGTATTTTACGCT 57.483 34.783 3.82 0.00 41.64 5.07
469 472 4.752661 TTGTTGTGGGTATTTTACGCTC 57.247 40.909 3.82 1.30 41.64 5.03
470 473 3.741249 TGTTGTGGGTATTTTACGCTCA 58.259 40.909 3.82 3.57 41.32 4.26
471 474 3.749088 TGTTGTGGGTATTTTACGCTCAG 59.251 43.478 6.59 0.00 42.96 3.35
583 587 5.724328 TGAGGTGTCTATGATGACTTTGTC 58.276 41.667 0.00 0.00 37.79 3.18
609 613 6.549912 TCTCAAAATGATGTGACAACTCAG 57.450 37.500 0.00 0.00 0.00 3.35
613 617 8.394971 TCAAAATGATGTGACAACTCAGTATT 57.605 30.769 0.00 0.00 0.00 1.89
620 624 9.337396 TGATGTGACAACTCAGTATTTTAAAGT 57.663 29.630 0.00 0.00 0.00 2.66
623 627 8.609176 TGTGACAACTCAGTATTTTAAAGTGTC 58.391 33.333 0.00 0.00 0.00 3.67
667 679 8.250332 TGCGCTCATAAGATGAATGTATACATA 58.750 33.333 18.56 4.80 39.11 2.29
693 705 4.523083 ACACGGCCATATGAAATTGTACT 58.477 39.130 2.24 0.00 0.00 2.73
756 769 6.822676 TGTAGTTAGGAGAGACTAGTACAAGC 59.177 42.308 0.00 0.00 28.95 4.01
778 798 4.523558 GCTCCCAGTATTTCGGTATAGAGT 59.476 45.833 0.00 0.00 0.00 3.24
779 799 5.709164 GCTCCCAGTATTTCGGTATAGAGTA 59.291 44.000 0.00 0.00 0.00 2.59
780 800 6.127952 GCTCCCAGTATTTCGGTATAGAGTAG 60.128 46.154 0.00 0.00 0.00 2.57
781 801 6.845908 TCCCAGTATTTCGGTATAGAGTAGT 58.154 40.000 0.00 0.00 0.00 2.73
782 802 7.977818 TCCCAGTATTTCGGTATAGAGTAGTA 58.022 38.462 0.00 0.00 0.00 1.82
783 803 7.880195 TCCCAGTATTTCGGTATAGAGTAGTAC 59.120 40.741 0.00 0.00 0.00 2.73
784 804 7.148507 CCCAGTATTTCGGTATAGAGTAGTACG 60.149 44.444 0.00 0.00 0.00 3.67
824 844 0.528901 CAACTGTCGGTCACGTTGGA 60.529 55.000 0.00 0.00 41.85 3.53
881 1212 7.222999 CACCAGGAGACGAATAAAAGAATAGAC 59.777 40.741 0.00 0.00 0.00 2.59
897 1228 2.279582 AGACGAACATGACGACCATC 57.720 50.000 19.43 9.46 31.94 3.51
919 1250 3.070018 GTGGTCTTCAAGTCAGGTGATG 58.930 50.000 0.00 0.00 0.00 3.07
975 1307 0.537653 CCCCCGTTCTCTTTCTCTCC 59.462 60.000 0.00 0.00 0.00 3.71
984 1316 1.748493 CTCTTTCTCTCCCTGTCTCCG 59.252 57.143 0.00 0.00 0.00 4.63
1402 1752 1.135199 TCATCAAGAGGGTACGCGAAC 60.135 52.381 15.93 1.26 0.00 3.95
1473 1875 2.730626 GATCCCATCGAATCGAGCG 58.269 57.895 12.00 4.69 39.91 5.03
1474 1876 0.039074 GATCCCATCGAATCGAGCGT 60.039 55.000 12.00 0.00 39.91 5.07
1766 2368 5.182001 ACAACAGTAGAATCCAATGTGAAGC 59.818 40.000 0.00 0.00 0.00 3.86
1827 2430 4.568359 AGTGTTAGCTGATTTGCTATGTCG 59.432 41.667 0.00 0.00 43.92 4.35
1849 2452 4.926238 CGGATAGATCTTGTCATGGTTAGC 59.074 45.833 0.00 0.00 0.00 3.09
2076 2711 3.798202 AGTTAACCGATTCATCAGCTCC 58.202 45.455 0.88 0.00 0.00 4.70
2077 2712 3.197766 AGTTAACCGATTCATCAGCTCCA 59.802 43.478 0.88 0.00 0.00 3.86
2093 2728 2.295885 CTCCATTGAAGATGAGGGCAC 58.704 52.381 0.00 0.00 0.00 5.01
2109 2744 0.519961 GCACCGTGGCGTTTCTAAAT 59.480 50.000 0.00 0.00 0.00 1.40
2124 2759 6.148811 CGTTTCTAAATGTTCCACATGGTAGT 59.851 38.462 0.00 0.00 37.97 2.73
2135 2770 1.908619 ACATGGTAGTGGTGCAGATCA 59.091 47.619 0.00 0.00 0.00 2.92
2142 2777 5.186198 GGTAGTGGTGCAGATCATAACTTT 58.814 41.667 0.00 0.00 0.00 2.66
2143 2778 5.648092 GGTAGTGGTGCAGATCATAACTTTT 59.352 40.000 0.00 0.00 0.00 2.27
2144 2779 6.151144 GGTAGTGGTGCAGATCATAACTTTTT 59.849 38.462 0.00 0.00 0.00 1.94
2228 2868 8.244113 TCGGCTTGTATGTATAGTTCTATGATG 58.756 37.037 2.95 0.00 0.00 3.07
2297 2938 1.725641 TAGATTTGTGCTCTGCGTGG 58.274 50.000 0.00 0.00 0.00 4.94
2384 3054 5.290386 AGTTTCTGTACTGCACTGTTCTAC 58.710 41.667 0.00 0.00 0.00 2.59
2387 3057 6.835819 TTCTGTACTGCACTGTTCTACTAT 57.164 37.500 0.00 0.00 0.00 2.12
2389 3059 7.228314 TCTGTACTGCACTGTTCTACTATTT 57.772 36.000 0.00 0.00 0.00 1.40
2390 3060 7.313646 TCTGTACTGCACTGTTCTACTATTTC 58.686 38.462 0.00 0.00 0.00 2.17
2393 3063 7.813148 TGTACTGCACTGTTCTACTATTTCTTC 59.187 37.037 0.00 0.00 0.00 2.87
2423 3093 7.581213 AAATGACTCACAACTTGTAATCCAA 57.419 32.000 0.00 0.00 0.00 3.53
2424 3094 7.581213 AATGACTCACAACTTGTAATCCAAA 57.419 32.000 0.00 0.00 31.20 3.28
2442 3112 3.560025 CCAAACAGGCTACAGTCTTCCAT 60.560 47.826 0.00 0.00 0.00 3.41
2694 3364 2.349886 GGACGATGTTGTCATGAAGCTC 59.650 50.000 0.00 0.00 40.72 4.09
2736 3406 1.194781 TCCTGGTCACTCTTGGAGGC 61.195 60.000 0.00 0.00 33.35 4.70
2737 3407 1.483595 CCTGGTCACTCTTGGAGGCA 61.484 60.000 0.00 0.00 33.35 4.75
2969 3670 0.321298 ATTTCCGTGGAGTTGTCCCG 60.321 55.000 0.00 0.00 43.15 5.14
2972 3673 2.732016 CGTGGAGTTGTCCCGTCA 59.268 61.111 0.00 0.00 43.15 4.35
3092 3795 4.102035 CTTGCCTACAAGCATTTCCTTC 57.898 45.455 0.00 0.00 46.38 3.46
3149 3864 0.597568 CTCATGCCCTTTTTCGTGCA 59.402 50.000 0.00 0.00 38.23 4.57
3366 4084 7.081526 AGCTTCTAATTCTGCAAGTTGTATG 57.918 36.000 4.48 0.00 33.76 2.39
3383 4101 2.604046 ATGGTACGCTGATGGAGAAC 57.396 50.000 0.00 0.00 0.00 3.01
3459 4198 0.326264 AATTCTGCTGGACGGCTCTT 59.674 50.000 4.59 0.00 0.00 2.85
3570 4311 5.358160 GGAATATGTGCTGTAGGCTTTCTTT 59.642 40.000 0.00 0.00 42.39 2.52
3592 4333 4.478206 TTTAGTTGAGGCAGATCCAGAG 57.522 45.455 0.00 0.00 37.29 3.35
3593 4334 2.244486 AGTTGAGGCAGATCCAGAGA 57.756 50.000 0.00 0.00 37.29 3.10
3595 4336 1.138661 GTTGAGGCAGATCCAGAGAGG 59.861 57.143 0.00 0.00 37.29 3.69
3597 4338 1.570979 TGAGGCAGATCCAGAGAGGTA 59.429 52.381 0.00 0.00 39.02 3.08
3598 4339 2.178764 TGAGGCAGATCCAGAGAGGTAT 59.821 50.000 0.00 0.00 39.02 2.73
3599 4340 3.399305 TGAGGCAGATCCAGAGAGGTATA 59.601 47.826 0.00 0.00 39.02 1.47
3600 4341 3.761752 GAGGCAGATCCAGAGAGGTATAC 59.238 52.174 0.00 0.00 39.02 1.47
3604 4345 5.775701 GGCAGATCCAGAGAGGTATACTTTA 59.224 44.000 2.25 0.00 39.02 1.85
3605 4346 6.071616 GGCAGATCCAGAGAGGTATACTTTAG 60.072 46.154 2.25 0.00 39.02 1.85
3606 4347 6.492087 GCAGATCCAGAGAGGTATACTTTAGT 59.508 42.308 2.25 0.00 39.02 2.24
3608 4349 7.721842 CAGATCCAGAGAGGTATACTTTAGTGA 59.278 40.741 2.25 0.00 39.02 3.41
3609 4350 8.452868 AGATCCAGAGAGGTATACTTTAGTGAT 58.547 37.037 2.25 0.00 39.02 3.06
3610 4351 8.644374 ATCCAGAGAGGTATACTTTAGTGATC 57.356 38.462 2.25 0.00 39.02 2.92
3611 4352 7.817440 TCCAGAGAGGTATACTTTAGTGATCT 58.183 38.462 2.25 0.00 39.02 2.75
3613 4354 8.919145 CCAGAGAGGTATACTTTAGTGATCTTT 58.081 37.037 2.25 0.00 0.00 2.52
3667 5005 8.274322 AGAATCTCATGTTGTATTGGAACCATA 58.726 33.333 0.00 0.00 0.00 2.74
3681 5019 5.989477 TGGAACCATACATACCTCTTTCAG 58.011 41.667 0.00 0.00 0.00 3.02
3702 5040 4.271049 CAGGTAGTATTGGTTTCGATGCTG 59.729 45.833 0.00 0.00 32.89 4.41
3703 5041 3.560068 GGTAGTATTGGTTTCGATGCTGG 59.440 47.826 0.00 0.00 32.89 4.85
3711 5049 2.033151 GGTTTCGATGCTGGTATTACGC 60.033 50.000 0.00 0.00 0.00 4.42
3719 5057 2.280628 GCTGGTATTACGCTTTGCTCT 58.719 47.619 0.00 0.00 0.00 4.09
3720 5058 2.678336 GCTGGTATTACGCTTTGCTCTT 59.322 45.455 0.00 0.00 0.00 2.85
3774 5112 8.537858 GTCTAGTAGGTAGGAAAGGAAATGAAA 58.462 37.037 0.00 0.00 0.00 2.69
3806 5147 1.203100 AGGGCATCCTTTCTTTGTGCT 60.203 47.619 0.00 0.00 41.56 4.40
3817 5158 4.621068 TTCTTTGTGCTGAAGTGAAGTG 57.379 40.909 0.00 0.00 0.00 3.16
3833 5174 3.311322 TGAAGTGGACAGTTTAAAGCGTG 59.689 43.478 0.00 0.00 0.00 5.34
3892 5233 6.198687 CGACATGCTTGAAACTTGTTAAGAA 58.801 36.000 6.60 0.00 0.00 2.52
3923 5264 2.737679 CGACCTGTTAACCGGATTCTCC 60.738 54.545 21.47 3.98 0.00 3.71
3946 9186 2.031245 TGCAATCAAACGATGTGACACC 60.031 45.455 2.45 0.00 0.00 4.16
3954 9194 2.669569 ATGTGACACCTGTGCGCC 60.670 61.111 4.18 0.00 0.00 6.53
4029 9269 6.072119 TCGCGGAGATATTACTCATGTTATGT 60.072 38.462 6.13 0.00 38.51 2.29
4042 9282 6.090358 ACTCATGTTATGTGTAGTTTGTACGC 59.910 38.462 0.00 0.00 35.45 4.42
4044 9284 4.629092 TGTTATGTGTAGTTTGTACGCCA 58.371 39.130 0.00 0.00 0.00 5.69
4045 9285 5.055144 TGTTATGTGTAGTTTGTACGCCAA 58.945 37.500 0.00 0.00 0.00 4.52
4046 9286 5.177881 TGTTATGTGTAGTTTGTACGCCAAG 59.822 40.000 0.00 0.00 33.75 3.61
4047 9287 1.868498 TGTGTAGTTTGTACGCCAAGC 59.132 47.619 0.00 0.00 33.75 4.01
4048 9288 1.868498 GTGTAGTTTGTACGCCAAGCA 59.132 47.619 5.34 0.00 36.79 3.91
4049 9289 2.096417 GTGTAGTTTGTACGCCAAGCAG 60.096 50.000 5.34 0.00 36.79 4.24
4050 9290 2.224090 TGTAGTTTGTACGCCAAGCAGA 60.224 45.455 5.34 0.00 36.79 4.26
4051 9291 1.961793 AGTTTGTACGCCAAGCAGAA 58.038 45.000 5.34 0.00 36.79 3.02
4052 9292 2.294074 AGTTTGTACGCCAAGCAGAAA 58.706 42.857 5.34 0.00 36.79 2.52
4053 9293 2.290641 AGTTTGTACGCCAAGCAGAAAG 59.709 45.455 5.34 0.00 36.79 2.62
4054 9294 2.248280 TTGTACGCCAAGCAGAAAGA 57.752 45.000 0.00 0.00 0.00 2.52
4055 9295 1.508632 TGTACGCCAAGCAGAAAGAC 58.491 50.000 0.00 0.00 0.00 3.01
4056 9296 0.796927 GTACGCCAAGCAGAAAGACC 59.203 55.000 0.00 0.00 0.00 3.85
4057 9297 0.394938 TACGCCAAGCAGAAAGACCA 59.605 50.000 0.00 0.00 0.00 4.02
4058 9298 0.250901 ACGCCAAGCAGAAAGACCAT 60.251 50.000 0.00 0.00 0.00 3.55
4099 9339 3.864686 CCACTGCGGCGTATGTGC 61.865 66.667 9.37 0.00 0.00 4.57
4101 9341 2.358125 ACTGCGGCGTATGTGCAA 60.358 55.556 9.37 0.00 38.30 4.08
4138 9378 4.901250 AGCCAATATACAGGGAAATTTGGG 59.099 41.667 0.00 0.00 0.00 4.12
4139 9379 4.503123 GCCAATATACAGGGAAATTTGGGC 60.503 45.833 0.00 0.00 0.00 5.36
4140 9380 4.040339 CCAATATACAGGGAAATTTGGGCC 59.960 45.833 0.00 0.00 0.00 5.80
4141 9381 2.174685 ATACAGGGAAATTTGGGCCC 57.825 50.000 17.59 17.59 42.37 5.80
4142 9382 0.787084 TACAGGGAAATTTGGGCCCA 59.213 50.000 24.45 24.45 44.55 5.36
4143 9383 0.545071 ACAGGGAAATTTGGGCCCAG 60.545 55.000 26.87 12.69 44.55 4.45
4144 9384 0.545071 CAGGGAAATTTGGGCCCAGT 60.545 55.000 26.87 15.65 44.55 4.00
4145 9385 0.193321 AGGGAAATTTGGGCCCAGTT 59.807 50.000 26.87 20.86 44.55 3.16
4146 9386 0.613260 GGGAAATTTGGGCCCAGTTC 59.387 55.000 26.87 26.27 41.64 3.01
4147 9387 1.644509 GGAAATTTGGGCCCAGTTCT 58.355 50.000 29.55 17.69 0.00 3.01
4148 9388 1.977854 GGAAATTTGGGCCCAGTTCTT 59.022 47.619 29.55 21.07 0.00 2.52
4149 9389 2.371841 GGAAATTTGGGCCCAGTTCTTT 59.628 45.455 29.55 24.07 0.00 2.52
4150 9390 3.181445 GGAAATTTGGGCCCAGTTCTTTT 60.181 43.478 29.55 22.88 0.00 2.27
4151 9391 3.490439 AATTTGGGCCCAGTTCTTTTG 57.510 42.857 26.87 0.00 0.00 2.44
4152 9392 1.127343 TTTGGGCCCAGTTCTTTTGG 58.873 50.000 26.87 0.00 35.41 3.28
4162 9402 5.535753 CCAGTTCTTTTGGGTGATTCTTT 57.464 39.130 0.00 0.00 31.87 2.52
4163 9403 5.532557 CCAGTTCTTTTGGGTGATTCTTTC 58.467 41.667 0.00 0.00 31.87 2.62
4164 9404 5.068987 CCAGTTCTTTTGGGTGATTCTTTCA 59.931 40.000 0.00 0.00 31.87 2.69
4165 9405 6.211515 CAGTTCTTTTGGGTGATTCTTTCAG 58.788 40.000 0.00 0.00 34.17 3.02
4166 9406 6.039717 CAGTTCTTTTGGGTGATTCTTTCAGA 59.960 38.462 0.00 0.00 34.17 3.27
4167 9407 6.607198 AGTTCTTTTGGGTGATTCTTTCAGAA 59.393 34.615 0.00 0.00 38.78 3.02
4168 9408 7.288621 AGTTCTTTTGGGTGATTCTTTCAGAAT 59.711 33.333 0.00 0.00 46.84 2.40
4180 9420 5.921962 TCTTTCAGAATCTTGAGGATCGA 57.078 39.130 0.00 0.00 38.61 3.59
4181 9421 5.655488 TCTTTCAGAATCTTGAGGATCGAC 58.345 41.667 0.00 0.00 38.61 4.20
4182 9422 4.392921 TTCAGAATCTTGAGGATCGACC 57.607 45.455 0.00 0.00 38.61 4.79
4183 9423 2.695666 TCAGAATCTTGAGGATCGACCC 59.304 50.000 0.00 0.00 38.61 4.46
4184 9424 2.697751 CAGAATCTTGAGGATCGACCCT 59.302 50.000 0.00 0.00 38.61 4.34
4189 9429 3.539842 GAGGATCGACCCTCCACC 58.460 66.667 15.80 0.00 45.44 4.61
4190 9430 2.041819 AGGATCGACCCTCCACCC 60.042 66.667 0.00 0.00 40.05 4.61
4191 9431 2.365105 GGATCGACCCTCCACCCA 60.365 66.667 0.00 0.00 32.72 4.51
4192 9432 2.435693 GGATCGACCCTCCACCCAG 61.436 68.421 0.00 0.00 32.72 4.45
4193 9433 3.083997 ATCGACCCTCCACCCAGC 61.084 66.667 0.00 0.00 0.00 4.85
4194 9434 3.625632 ATCGACCCTCCACCCAGCT 62.626 63.158 0.00 0.00 0.00 4.24
4195 9435 3.322466 CGACCCTCCACCCAGCTT 61.322 66.667 0.00 0.00 0.00 3.74
4196 9436 2.671682 GACCCTCCACCCAGCTTC 59.328 66.667 0.00 0.00 0.00 3.86
4197 9437 1.920835 GACCCTCCACCCAGCTTCT 60.921 63.158 0.00 0.00 0.00 2.85
4198 9438 1.904990 GACCCTCCACCCAGCTTCTC 61.905 65.000 0.00 0.00 0.00 2.87
4199 9439 2.674220 CCCTCCACCCAGCTTCTCC 61.674 68.421 0.00 0.00 0.00 3.71
4200 9440 2.674220 CCTCCACCCAGCTTCTCCC 61.674 68.421 0.00 0.00 0.00 4.30
4201 9441 1.920325 CTCCACCCAGCTTCTCCCA 60.920 63.158 0.00 0.00 0.00 4.37
4202 9442 1.908340 CTCCACCCAGCTTCTCCCAG 61.908 65.000 0.00 0.00 0.00 4.45
4203 9443 1.920325 CCACCCAGCTTCTCCCAGA 60.920 63.158 0.00 0.00 0.00 3.86
4204 9444 1.492133 CCACCCAGCTTCTCCCAGAA 61.492 60.000 0.00 0.00 32.50 3.02
4205 9445 0.622665 CACCCAGCTTCTCCCAGAAT 59.377 55.000 0.00 0.00 33.13 2.40
4206 9446 0.915364 ACCCAGCTTCTCCCAGAATC 59.085 55.000 0.00 0.00 33.13 2.52
4207 9447 1.211456 CCCAGCTTCTCCCAGAATCT 58.789 55.000 0.00 0.00 33.13 2.40
4208 9448 1.563410 CCCAGCTTCTCCCAGAATCTT 59.437 52.381 0.00 0.00 33.13 2.40
4209 9449 2.641305 CCAGCTTCTCCCAGAATCTTG 58.359 52.381 0.00 0.00 33.13 3.02
4210 9450 2.026449 CCAGCTTCTCCCAGAATCTTGT 60.026 50.000 0.00 0.00 33.13 3.16
4211 9451 3.198635 CCAGCTTCTCCCAGAATCTTGTA 59.801 47.826 0.00 0.00 33.13 2.41
4212 9452 4.187694 CAGCTTCTCCCAGAATCTTGTAC 58.812 47.826 0.00 0.00 33.13 2.90
4213 9453 3.198853 AGCTTCTCCCAGAATCTTGTACC 59.801 47.826 0.00 0.00 33.13 3.34
4214 9454 3.682999 GCTTCTCCCAGAATCTTGTACCC 60.683 52.174 0.00 0.00 33.13 3.69
4215 9455 3.199442 TCTCCCAGAATCTTGTACCCA 57.801 47.619 0.00 0.00 0.00 4.51
4216 9456 3.736094 TCTCCCAGAATCTTGTACCCAT 58.264 45.455 0.00 0.00 0.00 4.00
4217 9457 4.890988 TCTCCCAGAATCTTGTACCCATA 58.109 43.478 0.00 0.00 0.00 2.74
4218 9458 5.476983 TCTCCCAGAATCTTGTACCCATAT 58.523 41.667 0.00 0.00 0.00 1.78
4219 9459 5.911178 TCTCCCAGAATCTTGTACCCATATT 59.089 40.000 0.00 0.00 0.00 1.28
4220 9460 6.389869 TCTCCCAGAATCTTGTACCCATATTT 59.610 38.462 0.00 0.00 0.00 1.40
4221 9461 6.980577 TCCCAGAATCTTGTACCCATATTTT 58.019 36.000 0.00 0.00 0.00 1.82
4222 9462 7.060421 TCCCAGAATCTTGTACCCATATTTTC 58.940 38.462 0.00 0.00 0.00 2.29
4223 9463 7.062957 CCCAGAATCTTGTACCCATATTTTCT 58.937 38.462 0.00 0.00 0.00 2.52
4224 9464 8.217799 CCCAGAATCTTGTACCCATATTTTCTA 58.782 37.037 0.00 0.00 0.00 2.10
4225 9465 9.799106 CCAGAATCTTGTACCCATATTTTCTAT 57.201 33.333 0.00 0.00 0.00 1.98
4250 9490 9.959721 ATACAATTTGTTCACATCCTAACTAGT 57.040 29.630 7.45 0.00 0.00 2.57
4251 9491 8.691661 ACAATTTGTTCACATCCTAACTAGTT 57.308 30.769 13.68 13.68 0.00 2.24
4252 9492 9.787435 ACAATTTGTTCACATCCTAACTAGTTA 57.213 29.630 14.52 14.52 0.00 2.24
4258 9498 9.653287 TGTTCACATCCTAACTAGTTAGAATTG 57.347 33.333 34.41 28.11 43.90 2.32
4259 9499 9.654663 GTTCACATCCTAACTAGTTAGAATTGT 57.345 33.333 34.41 28.60 43.90 2.71
4290 9530 9.768215 AAAATATGGGTTTAAGATTCTGGAAGA 57.232 29.630 0.00 0.00 44.68 2.87
4300 9540 2.463441 TCTGGAAGAACCTGGGTGG 58.537 57.895 0.00 0.00 42.31 4.61
4301 9541 0.104672 TCTGGAAGAACCTGGGTGGA 60.105 55.000 0.00 0.00 42.31 4.02
4302 9542 0.326264 CTGGAAGAACCTGGGTGGAG 59.674 60.000 0.00 0.00 39.86 3.86
4303 9543 1.133809 TGGAAGAACCTGGGTGGAGG 61.134 60.000 0.00 0.00 39.71 4.30
4304 9544 0.840722 GGAAGAACCTGGGTGGAGGA 60.841 60.000 0.00 0.00 39.71 3.71
4305 9545 1.290134 GAAGAACCTGGGTGGAGGAT 58.710 55.000 0.00 0.00 39.71 3.24
4306 9546 1.210722 GAAGAACCTGGGTGGAGGATC 59.789 57.143 0.00 0.00 39.71 3.36
4307 9547 0.978146 AGAACCTGGGTGGAGGATCG 60.978 60.000 0.00 0.00 39.37 3.69
4308 9548 0.976073 GAACCTGGGTGGAGGATCGA 60.976 60.000 0.00 0.00 39.71 3.59
4309 9549 0.326618 AACCTGGGTGGAGGATCGAT 60.327 55.000 0.00 0.00 39.71 3.59
4310 9550 0.326618 ACCTGGGTGGAGGATCGATT 60.327 55.000 0.00 0.00 39.71 3.34
4311 9551 0.394565 CCTGGGTGGAGGATCGATTC 59.605 60.000 0.00 0.00 38.35 2.52
4312 9552 1.418334 CTGGGTGGAGGATCGATTCT 58.582 55.000 5.71 5.71 34.37 2.40
4313 9553 1.342819 CTGGGTGGAGGATCGATTCTC 59.657 57.143 23.48 23.48 34.37 2.87
4314 9554 1.342975 TGGGTGGAGGATCGATTCTCA 60.343 52.381 30.35 16.45 34.37 3.27
4315 9555 1.762957 GGGTGGAGGATCGATTCTCAA 59.237 52.381 30.35 20.33 34.37 3.02
4316 9556 2.224161 GGGTGGAGGATCGATTCTCAAG 60.224 54.545 30.35 0.00 34.37 3.02
4317 9557 2.695666 GGTGGAGGATCGATTCTCAAGA 59.304 50.000 30.35 14.08 34.37 3.02
4318 9558 3.323403 GGTGGAGGATCGATTCTCAAGAT 59.677 47.826 30.35 0.00 34.37 2.40
4319 9559 4.202305 GGTGGAGGATCGATTCTCAAGATT 60.202 45.833 30.35 0.00 34.37 2.40
4320 9560 5.011125 GGTGGAGGATCGATTCTCAAGATTA 59.989 44.000 30.35 10.06 34.37 1.75
4321 9561 6.295575 GGTGGAGGATCGATTCTCAAGATTAT 60.296 42.308 30.35 0.00 34.37 1.28
4322 9562 6.589523 GTGGAGGATCGATTCTCAAGATTATG 59.410 42.308 30.35 0.00 34.37 1.90
4323 9563 6.105333 GGAGGATCGATTCTCAAGATTATGG 58.895 44.000 30.35 0.00 34.37 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.562575 CCCACCCTTTTTCGTCGTCG 61.563 60.000 0.00 0.00 38.55 5.12
5 6 2.367241 CCAAATTCCCACCCTTTTTCGT 59.633 45.455 0.00 0.00 0.00 3.85
7 8 2.708861 ACCCAAATTCCCACCCTTTTTC 59.291 45.455 0.00 0.00 0.00 2.29
16 17 0.039618 GCTCTCCACCCAAATTCCCA 59.960 55.000 0.00 0.00 0.00 4.37
40 41 3.370104 TCAACTCTCTCCTCTTCCATCC 58.630 50.000 0.00 0.00 0.00 3.51
63 64 1.806542 TCCGCTGCAAAATCACTCTTC 59.193 47.619 0.00 0.00 0.00 2.87
77 78 3.869272 GCCGCACTGATTCCGCTG 61.869 66.667 0.00 0.00 0.00 5.18
97 99 1.675641 GAGCCCACGCATTTGGAGT 60.676 57.895 0.00 0.00 39.24 3.85
115 117 1.068921 CCACCCAAAACAAAGGCGG 59.931 57.895 0.00 0.00 0.00 6.13
117 119 0.249868 GAGCCACCCAAAACAAAGGC 60.250 55.000 0.00 0.00 42.31 4.35
128 130 2.665603 GACACTCCAGAGCCACCC 59.334 66.667 0.00 0.00 0.00 4.61
137 139 1.239296 CGTAGGACACCGACACTCCA 61.239 60.000 0.00 0.00 0.00 3.86
148 150 1.826720 GGATACCAACCACGTAGGACA 59.173 52.381 10.46 0.00 41.22 4.02
170 172 3.147595 GGGGGCTTTGCGGGAATC 61.148 66.667 0.00 0.00 0.00 2.52
177 179 2.743060 CAAACCAGGGGGCTTTGC 59.257 61.111 0.00 0.00 37.90 3.68
182 184 0.323451 CTAGAACCAAACCAGGGGGC 60.323 60.000 0.00 0.00 37.90 5.80
183 185 1.073098 ACTAGAACCAAACCAGGGGG 58.927 55.000 0.00 0.00 41.29 5.40
199 201 3.479489 GACTTTCGTTTCCCCCAAACTA 58.521 45.455 0.00 0.00 42.17 2.24
209 212 2.207590 ACCAGTTCGGACTTTCGTTTC 58.792 47.619 0.00 0.00 38.63 2.78
233 236 2.029666 GAGTCCCGCATCCATCCG 59.970 66.667 0.00 0.00 0.00 4.18
282 285 0.176910 TATCCATCCAAACTGCGCGA 59.823 50.000 12.10 0.00 0.00 5.87
285 288 1.860950 CTCGTATCCATCCAAACTGCG 59.139 52.381 0.00 0.00 0.00 5.18
288 291 3.375699 ACCTCTCGTATCCATCCAAACT 58.624 45.455 0.00 0.00 0.00 2.66
296 299 2.108168 CCCTCAAACCTCTCGTATCCA 58.892 52.381 0.00 0.00 0.00 3.41
297 300 2.101082 GACCCTCAAACCTCTCGTATCC 59.899 54.545 0.00 0.00 0.00 2.59
301 304 1.533469 CGGACCCTCAAACCTCTCGT 61.533 60.000 0.00 0.00 0.00 4.18
302 305 1.215647 CGGACCCTCAAACCTCTCG 59.784 63.158 0.00 0.00 0.00 4.04
304 307 1.841556 TGCGGACCCTCAAACCTCT 60.842 57.895 0.00 0.00 0.00 3.69
325 328 4.745351 TGATGTAGTATCAGGCCATCTCT 58.255 43.478 5.01 0.00 34.44 3.10
329 332 6.291648 CTACATGATGTAGTATCAGGCCAT 57.708 41.667 21.44 0.00 43.93 4.40
364 367 5.900339 ATAAGTGTATATCAACCGTTGCG 57.100 39.130 6.37 0.00 0.00 4.85
447 450 4.579340 TGAGCGTAAAATACCCACAACAAA 59.421 37.500 0.00 0.00 0.00 2.83
460 463 9.389570 GCTTTAAAATCTTAACTGAGCGTAAAA 57.610 29.630 0.00 0.00 0.00 1.52
461 464 8.019094 GGCTTTAAAATCTTAACTGAGCGTAAA 58.981 33.333 0.00 0.00 32.59 2.01
463 466 6.877322 AGGCTTTAAAATCTTAACTGAGCGTA 59.123 34.615 0.00 0.00 32.59 4.42
464 467 5.705905 AGGCTTTAAAATCTTAACTGAGCGT 59.294 36.000 0.00 0.00 32.59 5.07
465 468 6.183309 AGGCTTTAAAATCTTAACTGAGCG 57.817 37.500 0.00 0.00 32.59 5.03
466 469 6.309009 GCAAGGCTTTAAAATCTTAACTGAGC 59.691 38.462 0.00 0.00 31.68 4.26
467 470 7.370383 TGCAAGGCTTTAAAATCTTAACTGAG 58.630 34.615 0.00 0.00 0.00 3.35
468 471 7.283625 TGCAAGGCTTTAAAATCTTAACTGA 57.716 32.000 0.00 0.00 0.00 3.41
469 472 8.538409 AATGCAAGGCTTTAAAATCTTAACTG 57.462 30.769 0.00 0.00 0.00 3.16
470 473 9.559732 AAAATGCAAGGCTTTAAAATCTTAACT 57.440 25.926 0.00 0.00 0.00 2.24
545 549 6.406370 AGACACCTCATATTCGATGAAAACA 58.594 36.000 0.00 0.00 0.00 2.83
583 587 7.364970 TGAGTTGTCACATCATTTTGAGATTG 58.635 34.615 0.00 0.00 0.00 2.67
619 623 5.343593 GCACTCACGCATATTCTATAGACAC 59.656 44.000 0.67 0.00 0.00 3.67
620 624 5.461526 GCACTCACGCATATTCTATAGACA 58.538 41.667 0.67 0.00 0.00 3.41
639 651 3.801698 ACATTCATCTTATGAGCGCACT 58.198 40.909 11.47 0.00 40.94 4.40
667 679 8.100791 AGTACAATTTCATATGGCCGTGTATAT 58.899 33.333 8.05 0.00 0.00 0.86
673 685 4.335315 CACAGTACAATTTCATATGGCCGT 59.665 41.667 1.35 1.35 0.00 5.68
676 688 8.208718 TCTAACACAGTACAATTTCATATGGC 57.791 34.615 2.13 0.00 0.00 4.40
738 751 3.372241 GGGAGCTTGTACTAGTCTCTCCT 60.372 52.174 20.33 5.06 38.81 3.69
740 753 3.622630 TGGGAGCTTGTACTAGTCTCTC 58.377 50.000 19.46 17.80 0.00 3.20
756 769 6.941436 ACTACTCTATACCGAAATACTGGGAG 59.059 42.308 0.00 0.00 0.00 4.30
778 798 8.625786 TGCCATGAAACTATATACTCGTACTA 57.374 34.615 0.00 0.00 0.00 1.82
779 799 7.520451 TGCCATGAAACTATATACTCGTACT 57.480 36.000 0.00 0.00 0.00 2.73
780 800 8.027189 TGATGCCATGAAACTATATACTCGTAC 58.973 37.037 0.00 0.00 0.00 3.67
781 801 8.117813 TGATGCCATGAAACTATATACTCGTA 57.882 34.615 0.00 0.00 0.00 3.43
782 802 6.993079 TGATGCCATGAAACTATATACTCGT 58.007 36.000 0.00 0.00 0.00 4.18
783 803 7.600375 AGTTGATGCCATGAAACTATATACTCG 59.400 37.037 0.00 0.00 31.26 4.18
784 804 8.715998 CAGTTGATGCCATGAAACTATATACTC 58.284 37.037 0.00 0.00 31.80 2.59
842 1173 0.961019 CCTGGTGTCCCACATGTTTG 59.039 55.000 0.00 0.00 35.17 2.93
843 1174 0.850100 TCCTGGTGTCCCACATGTTT 59.150 50.000 0.00 0.00 35.17 2.83
850 1181 0.544357 ATTCGTCTCCTGGTGTCCCA 60.544 55.000 0.00 0.00 38.87 4.37
863 1194 8.804743 TCATGTTCGTCTATTCTTTTATTCGTC 58.195 33.333 0.00 0.00 0.00 4.20
897 1228 1.068588 TCACCTGACTTGAAGACCACG 59.931 52.381 0.00 0.00 0.00 4.94
975 1307 2.258591 CACACGGACGGAGACAGG 59.741 66.667 0.00 0.00 0.00 4.00
1402 1752 1.402456 CGGTAACAAGGAGAGTCGTGG 60.402 57.143 0.00 0.00 0.00 4.94
1466 1868 3.186817 CCGAAGATTCTACTACGCTCGAT 59.813 47.826 3.82 0.00 0.00 3.59
1467 1869 2.543012 CCGAAGATTCTACTACGCTCGA 59.457 50.000 3.82 0.00 0.00 4.04
1468 1870 2.906153 CCGAAGATTCTACTACGCTCG 58.094 52.381 0.00 0.00 0.00 5.03
1469 1871 2.605097 GGCCGAAGATTCTACTACGCTC 60.605 54.545 0.00 0.00 0.00 5.03
1470 1872 1.337387 GGCCGAAGATTCTACTACGCT 59.663 52.381 0.00 0.00 0.00 5.07
1471 1873 1.066605 TGGCCGAAGATTCTACTACGC 59.933 52.381 0.00 0.00 0.00 4.42
1472 1874 2.358267 ACTGGCCGAAGATTCTACTACG 59.642 50.000 0.00 0.00 0.00 3.51
1473 1875 4.388378 AACTGGCCGAAGATTCTACTAC 57.612 45.455 0.00 0.00 0.00 2.73
1474 1876 4.710375 AGAAACTGGCCGAAGATTCTACTA 59.290 41.667 12.33 0.00 37.49 1.82
1766 2368 2.997463 TGTGCATCACAACGAAACATG 58.003 42.857 0.00 0.00 41.69 3.21
1795 2397 3.319137 TCAGCTAACACTCGCAAATCT 57.681 42.857 0.00 0.00 0.00 2.40
1827 2430 5.698545 GTGCTAACCATGACAAGATCTATCC 59.301 44.000 0.00 0.00 0.00 2.59
1849 2452 9.476761 GCAAACATTTTCTCAAAAGTTTTAGTG 57.523 29.630 0.00 0.00 33.55 2.74
1908 2536 1.102154 TGGTGAACTGCCAACACTTG 58.898 50.000 0.00 0.00 35.28 3.16
2076 2711 1.019673 CGGTGCCCTCATCTTCAATG 58.980 55.000 0.00 0.00 0.00 2.82
2077 2712 0.620556 ACGGTGCCCTCATCTTCAAT 59.379 50.000 0.00 0.00 0.00 2.57
2093 2728 2.413634 GGAACATTTAGAAACGCCACGG 60.414 50.000 0.00 0.00 0.00 4.94
2144 2779 2.289547 CCTGCTTCTCCGTTTCGAAAAA 59.710 45.455 13.10 1.87 0.00 1.94
2145 2780 1.871039 CCTGCTTCTCCGTTTCGAAAA 59.129 47.619 13.10 0.00 0.00 2.29
2147 2782 0.391597 ACCTGCTTCTCCGTTTCGAA 59.608 50.000 0.00 0.00 0.00 3.71
2148 2783 0.319555 CACCTGCTTCTCCGTTTCGA 60.320 55.000 0.00 0.00 0.00 3.71
2149 2784 0.319555 TCACCTGCTTCTCCGTTTCG 60.320 55.000 0.00 0.00 0.00 3.46
2150 2785 2.003301 GATCACCTGCTTCTCCGTTTC 58.997 52.381 0.00 0.00 0.00 2.78
2151 2786 1.347707 TGATCACCTGCTTCTCCGTTT 59.652 47.619 0.00 0.00 0.00 3.60
2152 2787 0.976641 TGATCACCTGCTTCTCCGTT 59.023 50.000 0.00 0.00 0.00 4.44
2153 2788 0.976641 TTGATCACCTGCTTCTCCGT 59.023 50.000 0.00 0.00 0.00 4.69
2154 2789 1.338105 TGTTGATCACCTGCTTCTCCG 60.338 52.381 0.00 0.00 0.00 4.63
2155 2790 2.479566 TGTTGATCACCTGCTTCTCC 57.520 50.000 0.00 0.00 0.00 3.71
2228 2868 4.740934 GCACCTGATATGTGGTAGTTCTCC 60.741 50.000 0.00 0.00 34.79 3.71
2384 3054 7.331934 TGTGAGTCATTTTCCTCGAAGAAATAG 59.668 37.037 9.90 6.27 35.74 1.73
2387 3057 5.364778 TGTGAGTCATTTTCCTCGAAGAAA 58.635 37.500 5.08 5.08 34.09 2.52
2389 3059 4.600692 TGTGAGTCATTTTCCTCGAAGA 57.399 40.909 0.00 0.00 0.00 2.87
2390 3060 4.752101 AGTTGTGAGTCATTTTCCTCGAAG 59.248 41.667 0.00 0.00 0.00 3.79
2393 3063 4.273480 ACAAGTTGTGAGTCATTTTCCTCG 59.727 41.667 7.96 0.00 0.00 4.63
2423 3093 5.431765 CATAATGGAAGACTGTAGCCTGTT 58.568 41.667 0.00 0.00 0.00 3.16
2424 3094 4.141620 CCATAATGGAAGACTGTAGCCTGT 60.142 45.833 0.00 0.00 40.96 4.00
2442 3112 7.503230 TCAGCAATCAAGCTTATTGATCCATAA 59.497 33.333 22.23 0.00 43.70 1.90
2694 3364 1.095807 GCTTAAAGGTAGGGCGCCAG 61.096 60.000 30.85 14.69 0.00 4.85
2736 3406 2.098117 GGCATAGTACTTGCAGCCTTTG 59.902 50.000 22.76 0.00 41.95 2.77
2737 3407 2.290896 TGGCATAGTACTTGCAGCCTTT 60.291 45.455 22.76 0.00 41.95 3.11
3128 3843 1.401539 GCACGAAAAAGGGCATGAGAC 60.402 52.381 0.00 0.00 40.96 3.36
3129 3844 0.881118 GCACGAAAAAGGGCATGAGA 59.119 50.000 0.00 0.00 40.96 3.27
3149 3864 7.402071 TGGAATTAGTGAACCACCTACTTCTAT 59.598 37.037 0.00 0.00 34.49 1.98
3239 3954 0.888736 TTGTGGTGGTGATTGCTCCG 60.889 55.000 0.00 0.00 0.00 4.63
3331 4046 6.073331 GCAGAATTAGAAGCTAGCGAAATCAT 60.073 38.462 9.55 0.00 0.00 2.45
3366 4084 2.604046 ATGTTCTCCATCAGCGTACC 57.396 50.000 0.00 0.00 0.00 3.34
3383 4101 9.726232 CAAAATATCATCCACTACAACTGAATG 57.274 33.333 0.00 0.00 0.00 2.67
3445 4163 0.901827 TCATAAAGAGCCGTCCAGCA 59.098 50.000 0.00 0.00 34.23 4.41
3529 4270 1.632589 TCCTCAGCAACAGCACTCTA 58.367 50.000 0.00 0.00 0.00 2.43
3531 4272 1.818642 ATTCCTCAGCAACAGCACTC 58.181 50.000 0.00 0.00 0.00 3.51
3570 4311 4.532126 TCTCTGGATCTGCCTCAACTAAAA 59.468 41.667 0.00 0.00 37.63 1.52
3573 4314 3.295093 CTCTCTGGATCTGCCTCAACTA 58.705 50.000 0.00 0.00 37.63 2.24
3574 4315 2.109774 CTCTCTGGATCTGCCTCAACT 58.890 52.381 0.00 0.00 37.63 3.16
3575 4316 1.138661 CCTCTCTGGATCTGCCTCAAC 59.861 57.143 0.00 0.00 38.35 3.18
3576 4317 1.273495 ACCTCTCTGGATCTGCCTCAA 60.273 52.381 0.00 0.00 39.71 3.02
3577 4318 0.337773 ACCTCTCTGGATCTGCCTCA 59.662 55.000 0.00 0.00 39.71 3.86
3578 4319 2.373335 TACCTCTCTGGATCTGCCTC 57.627 55.000 0.00 0.00 39.71 4.70
3579 4320 3.401002 AGTATACCTCTCTGGATCTGCCT 59.599 47.826 0.00 0.00 39.71 4.75
3581 4322 5.799827 AAAGTATACCTCTCTGGATCTGC 57.200 43.478 0.00 0.00 39.71 4.26
3582 4323 7.721842 TCACTAAAGTATACCTCTCTGGATCTG 59.278 40.741 0.00 0.00 39.71 2.90
3584 4325 8.644374 ATCACTAAAGTATACCTCTCTGGATC 57.356 38.462 0.00 0.00 39.71 3.36
3604 4345 8.562892 CACTTCAAAGTTGACATAAAGATCACT 58.437 33.333 0.00 0.00 37.08 3.41
3605 4346 7.324616 GCACTTCAAAGTTGACATAAAGATCAC 59.675 37.037 0.00 0.00 37.08 3.06
3606 4347 7.013178 TGCACTTCAAAGTTGACATAAAGATCA 59.987 33.333 0.00 0.00 37.08 2.92
3608 4349 7.275888 TGCACTTCAAAGTTGACATAAAGAT 57.724 32.000 0.00 0.00 37.08 2.40
3609 4350 6.691754 TGCACTTCAAAGTTGACATAAAGA 57.308 33.333 0.00 0.00 37.08 2.52
3610 4351 6.751425 TGTTGCACTTCAAAGTTGACATAAAG 59.249 34.615 0.00 0.00 37.08 1.85
3611 4352 6.625362 TGTTGCACTTCAAAGTTGACATAAA 58.375 32.000 0.00 0.00 37.08 1.40
3613 4354 5.826601 TGTTGCACTTCAAAGTTGACATA 57.173 34.783 0.00 0.00 37.08 2.29
3616 4357 7.698836 AATATTGTTGCACTTCAAAGTTGAC 57.301 32.000 0.00 0.00 37.08 3.18
3617 4358 8.845227 TCTAATATTGTTGCACTTCAAAGTTGA 58.155 29.630 0.00 0.00 37.08 3.18
3618 4359 9.462174 TTCTAATATTGTTGCACTTCAAAGTTG 57.538 29.630 0.00 0.00 37.08 3.16
3656 4994 6.969043 TGAAAGAGGTATGTATGGTTCCAAT 58.031 36.000 0.00 0.00 0.00 3.16
3681 5019 3.560068 CCAGCATCGAAACCAATACTACC 59.440 47.826 0.00 0.00 0.00 3.18
3694 5032 2.863740 CAAAGCGTAATACCAGCATCGA 59.136 45.455 0.00 0.00 0.00 3.59
3702 5040 9.218359 GTTTAAATAAGAGCAAAGCGTAATACC 57.782 33.333 0.00 0.00 0.00 2.73
3703 5041 9.983804 AGTTTAAATAAGAGCAAAGCGTAATAC 57.016 29.630 0.00 0.00 0.00 1.89
3774 5112 4.322057 AGGATGCCCTGTTTTCTATTGT 57.678 40.909 0.00 0.00 42.42 2.71
3784 5125 2.242043 CACAAAGAAAGGATGCCCTGT 58.758 47.619 0.00 0.00 43.48 4.00
3787 5128 1.067354 CAGCACAAAGAAAGGATGCCC 60.067 52.381 0.00 0.00 36.96 5.36
3806 5147 5.065988 GCTTTAAACTGTCCACTTCACTTCA 59.934 40.000 0.00 0.00 0.00 3.02
3817 5158 6.476243 TCTTTATCACGCTTTAAACTGTCC 57.524 37.500 0.00 0.00 0.00 4.02
3847 5188 4.697828 TCGCCAGTTAAGTTTGATTGCATA 59.302 37.500 0.00 0.00 0.00 3.14
3850 5191 3.234386 GTCGCCAGTTAAGTTTGATTGC 58.766 45.455 0.00 0.00 0.00 3.56
3859 5200 2.076100 TCAAGCATGTCGCCAGTTAAG 58.924 47.619 0.00 0.00 44.04 1.85
3892 5233 2.776370 TAACAGGTCGACGGGGCTCT 62.776 60.000 9.92 0.00 0.00 4.09
3923 5264 3.605056 GTGTCACATCGTTTGATTGCATG 59.395 43.478 0.00 0.00 30.49 4.06
3954 9194 1.982073 GAAACAGCCATTCCCGAGCG 61.982 60.000 0.00 0.00 0.00 5.03
3955 9195 0.960364 TGAAACAGCCATTCCCGAGC 60.960 55.000 0.00 0.00 0.00 5.03
3956 9196 1.672881 GATGAAACAGCCATTCCCGAG 59.327 52.381 0.00 0.00 0.00 4.63
3964 9204 0.684535 TCCACGAGATGAAACAGCCA 59.315 50.000 0.00 0.00 0.00 4.75
4029 9269 2.139917 CTGCTTGGCGTACAAACTACA 58.860 47.619 0.00 0.00 38.91 2.74
4039 9279 0.250901 ATGGTCTTTCTGCTTGGCGT 60.251 50.000 0.00 0.00 0.00 5.68
4042 9282 2.205022 TGGATGGTCTTTCTGCTTGG 57.795 50.000 0.00 0.00 0.00 3.61
4044 9284 4.922206 TGTAATGGATGGTCTTTCTGCTT 58.078 39.130 0.00 0.00 0.00 3.91
4045 9285 4.574674 TGTAATGGATGGTCTTTCTGCT 57.425 40.909 0.00 0.00 0.00 4.24
4046 9286 4.883585 TCATGTAATGGATGGTCTTTCTGC 59.116 41.667 0.00 0.00 46.73 4.26
4047 9287 7.395190 TTTCATGTAATGGATGGTCTTTCTG 57.605 36.000 0.00 0.00 46.73 3.02
4048 9288 6.604795 CCTTTCATGTAATGGATGGTCTTTCT 59.395 38.462 0.00 0.00 46.73 2.52
4049 9289 6.681368 GCCTTTCATGTAATGGATGGTCTTTC 60.681 42.308 11.48 0.00 46.31 2.62
4050 9290 5.127682 GCCTTTCATGTAATGGATGGTCTTT 59.872 40.000 11.48 0.00 46.31 2.52
4051 9291 4.646492 GCCTTTCATGTAATGGATGGTCTT 59.354 41.667 11.48 0.00 46.31 3.01
4052 9292 4.210331 GCCTTTCATGTAATGGATGGTCT 58.790 43.478 11.48 0.00 46.31 3.85
4053 9293 3.953612 TGCCTTTCATGTAATGGATGGTC 59.046 43.478 11.48 0.00 46.31 4.02
4054 9294 3.979911 TGCCTTTCATGTAATGGATGGT 58.020 40.909 11.48 0.00 46.31 3.55
4056 9296 6.151663 TCATTGCCTTTCATGTAATGGATG 57.848 37.500 11.48 8.37 46.73 3.51
4057 9297 5.303589 CCTCATTGCCTTTCATGTAATGGAT 59.696 40.000 11.48 0.00 46.73 3.41
4058 9298 4.646040 CCTCATTGCCTTTCATGTAATGGA 59.354 41.667 11.48 0.00 46.73 3.41
4140 9380 5.068987 TGAAAGAATCACCCAAAAGAACTGG 59.931 40.000 0.00 0.00 31.50 4.00
4141 9381 6.039717 TCTGAAAGAATCACCCAAAAGAACTG 59.960 38.462 0.00 0.00 42.31 3.16
4142 9382 6.129179 TCTGAAAGAATCACCCAAAAGAACT 58.871 36.000 0.00 0.00 42.31 3.01
4143 9383 6.391227 TCTGAAAGAATCACCCAAAAGAAC 57.609 37.500 0.00 0.00 42.31 3.01
4157 9397 9.673874 GGGTCGATCCTCAAGATTCTGAAAGAA 62.674 44.444 7.71 0.00 46.53 2.52
4158 9398 5.394663 GGTCGATCCTCAAGATTCTGAAAGA 60.395 44.000 0.00 0.00 44.68 2.52
4159 9399 4.808364 GGTCGATCCTCAAGATTCTGAAAG 59.192 45.833 0.00 0.00 34.42 2.62
4160 9400 4.383118 GGGTCGATCCTCAAGATTCTGAAA 60.383 45.833 7.71 0.00 34.42 2.69
4161 9401 3.133003 GGGTCGATCCTCAAGATTCTGAA 59.867 47.826 7.71 0.00 34.42 3.02
4162 9402 2.695666 GGGTCGATCCTCAAGATTCTGA 59.304 50.000 7.71 0.00 34.42 3.27
4163 9403 2.697751 AGGGTCGATCCTCAAGATTCTG 59.302 50.000 12.79 0.00 34.42 3.02
4164 9404 3.039252 AGGGTCGATCCTCAAGATTCT 57.961 47.619 12.79 0.00 34.42 2.40
4173 9413 2.041819 GGGTGGAGGGTCGATCCT 60.042 66.667 19.69 19.69 40.43 3.24
4174 9414 2.365105 TGGGTGGAGGGTCGATCC 60.365 66.667 6.61 6.61 37.35 3.36
4175 9415 3.095347 GCTGGGTGGAGGGTCGATC 62.095 68.421 0.00 0.00 0.00 3.69
4176 9416 3.083997 GCTGGGTGGAGGGTCGAT 61.084 66.667 0.00 0.00 0.00 3.59
4177 9417 3.846405 AAGCTGGGTGGAGGGTCGA 62.846 63.158 0.00 0.00 0.00 4.20
4178 9418 3.316573 GAAGCTGGGTGGAGGGTCG 62.317 68.421 0.00 0.00 0.00 4.79
4179 9419 1.904990 GAGAAGCTGGGTGGAGGGTC 61.905 65.000 0.00 0.00 0.00 4.46
4180 9420 1.920835 GAGAAGCTGGGTGGAGGGT 60.921 63.158 0.00 0.00 0.00 4.34
4181 9421 2.674220 GGAGAAGCTGGGTGGAGGG 61.674 68.421 0.00 0.00 0.00 4.30
4182 9422 2.674220 GGGAGAAGCTGGGTGGAGG 61.674 68.421 0.00 0.00 0.00 4.30
4183 9423 1.908340 CTGGGAGAAGCTGGGTGGAG 61.908 65.000 0.00 0.00 0.00 3.86
4184 9424 1.920325 CTGGGAGAAGCTGGGTGGA 60.920 63.158 0.00 0.00 0.00 4.02
4185 9425 1.492133 TTCTGGGAGAAGCTGGGTGG 61.492 60.000 0.00 0.00 29.50 4.61
4186 9426 0.622665 ATTCTGGGAGAAGCTGGGTG 59.377 55.000 0.00 0.00 37.69 4.61
4187 9427 0.915364 GATTCTGGGAGAAGCTGGGT 59.085 55.000 0.00 0.00 37.62 4.51
4188 9428 3.796764 GATTCTGGGAGAAGCTGGG 57.203 57.895 0.00 0.00 37.62 4.45
4192 9432 3.536570 GGTACAAGATTCTGGGAGAAGC 58.463 50.000 0.00 0.00 40.68 3.86
4193 9433 3.519510 TGGGTACAAGATTCTGGGAGAAG 59.480 47.826 0.00 0.00 37.69 2.85
4194 9434 3.526899 TGGGTACAAGATTCTGGGAGAA 58.473 45.455 0.00 0.00 38.78 2.87
4195 9435 3.199442 TGGGTACAAGATTCTGGGAGA 57.801 47.619 0.00 0.00 0.00 3.71
4196 9436 5.832539 ATATGGGTACAAGATTCTGGGAG 57.167 43.478 0.00 0.00 0.00 4.30
4197 9437 6.590656 AAATATGGGTACAAGATTCTGGGA 57.409 37.500 0.00 0.00 0.00 4.37
4198 9438 7.062957 AGAAAATATGGGTACAAGATTCTGGG 58.937 38.462 0.00 0.00 0.00 4.45
4199 9439 9.799106 ATAGAAAATATGGGTACAAGATTCTGG 57.201 33.333 0.00 0.00 0.00 3.86
4224 9464 9.959721 ACTAGTTAGGATGTGAACAAATTGTAT 57.040 29.630 0.00 0.00 0.00 2.29
4225 9465 9.787435 AACTAGTTAGGATGTGAACAAATTGTA 57.213 29.630 6.26 0.00 0.00 2.41
4226 9466 8.691661 AACTAGTTAGGATGTGAACAAATTGT 57.308 30.769 6.26 0.00 0.00 2.71
4232 9472 9.653287 CAATTCTAACTAGTTAGGATGTGAACA 57.347 33.333 32.46 14.41 39.76 3.18
4233 9473 9.654663 ACAATTCTAACTAGTTAGGATGTGAAC 57.345 33.333 32.46 0.00 39.76 3.18
4264 9504 9.768215 TCTTCCAGAATCTTAAACCCATATTTT 57.232 29.630 0.00 0.00 0.00 1.82
4265 9505 9.768215 TTCTTCCAGAATCTTAAACCCATATTT 57.232 29.630 0.00 0.00 0.00 1.40
4266 9506 9.190317 GTTCTTCCAGAATCTTAAACCCATATT 57.810 33.333 0.00 0.00 36.50 1.28
4267 9507 7.780271 GGTTCTTCCAGAATCTTAAACCCATAT 59.220 37.037 0.00 0.00 36.50 1.78
4268 9508 7.036863 AGGTTCTTCCAGAATCTTAAACCCATA 60.037 37.037 0.00 0.00 42.75 2.74
4269 9509 5.952347 GGTTCTTCCAGAATCTTAAACCCAT 59.048 40.000 0.00 0.00 36.50 4.00
4270 9510 5.074515 AGGTTCTTCCAGAATCTTAAACCCA 59.925 40.000 0.00 0.00 42.75 4.51
4271 9511 5.416013 CAGGTTCTTCCAGAATCTTAAACCC 59.584 44.000 0.00 0.00 42.75 4.11
4272 9512 5.416013 CCAGGTTCTTCCAGAATCTTAAACC 59.584 44.000 0.00 0.00 42.75 3.27
4273 9513 5.416013 CCCAGGTTCTTCCAGAATCTTAAAC 59.584 44.000 0.00 0.00 42.75 2.01
4274 9514 5.074515 ACCCAGGTTCTTCCAGAATCTTAAA 59.925 40.000 0.00 0.00 42.75 1.52
4275 9515 4.601857 ACCCAGGTTCTTCCAGAATCTTAA 59.398 41.667 0.00 0.00 42.75 1.85
4276 9516 4.019321 CACCCAGGTTCTTCCAGAATCTTA 60.019 45.833 0.00 0.00 42.75 2.10
4277 9517 2.989571 ACCCAGGTTCTTCCAGAATCTT 59.010 45.455 0.00 0.00 42.75 2.40
4278 9518 2.307098 CACCCAGGTTCTTCCAGAATCT 59.693 50.000 0.00 0.00 46.04 2.40
4279 9519 2.619074 CCACCCAGGTTCTTCCAGAATC 60.619 54.545 0.00 0.00 36.50 2.52
4280 9520 1.355720 CCACCCAGGTTCTTCCAGAAT 59.644 52.381 0.00 0.00 36.50 2.40
4281 9521 0.771127 CCACCCAGGTTCTTCCAGAA 59.229 55.000 0.00 0.00 39.02 3.02
4282 9522 0.104672 TCCACCCAGGTTCTTCCAGA 60.105 55.000 0.00 0.00 39.02 3.86
4283 9523 0.326264 CTCCACCCAGGTTCTTCCAG 59.674 60.000 0.00 0.00 39.02 3.86
4284 9524 1.133809 CCTCCACCCAGGTTCTTCCA 61.134 60.000 0.00 0.00 39.02 3.53
4285 9525 0.840722 TCCTCCACCCAGGTTCTTCC 60.841 60.000 0.00 0.00 39.02 3.46
4286 9526 1.210722 GATCCTCCACCCAGGTTCTTC 59.789 57.143 0.00 0.00 39.02 2.87
4287 9527 1.290134 GATCCTCCACCCAGGTTCTT 58.710 55.000 0.00 0.00 39.02 2.52
4288 9528 0.978146 CGATCCTCCACCCAGGTTCT 60.978 60.000 0.00 0.00 39.02 3.01
4289 9529 0.976073 TCGATCCTCCACCCAGGTTC 60.976 60.000 0.00 0.00 39.02 3.62
4290 9530 0.326618 ATCGATCCTCCACCCAGGTT 60.327 55.000 0.00 0.00 39.02 3.50
4291 9531 0.326618 AATCGATCCTCCACCCAGGT 60.327 55.000 0.00 0.00 39.02 4.00
4292 9532 0.394565 GAATCGATCCTCCACCCAGG 59.605 60.000 0.00 0.00 39.47 4.45
4293 9533 1.342819 GAGAATCGATCCTCCACCCAG 59.657 57.143 0.00 0.00 0.00 4.45
4294 9534 1.342975 TGAGAATCGATCCTCCACCCA 60.343 52.381 9.36 0.00 38.61 4.51
4295 9535 1.414158 TGAGAATCGATCCTCCACCC 58.586 55.000 9.36 0.00 38.61 4.61
4296 9536 2.695666 TCTTGAGAATCGATCCTCCACC 59.304 50.000 9.36 0.00 38.61 4.61
4297 9537 4.599047 ATCTTGAGAATCGATCCTCCAC 57.401 45.455 9.36 0.00 38.61 4.02
4298 9538 6.295518 CCATAATCTTGAGAATCGATCCTCCA 60.296 42.308 9.36 0.00 38.61 3.86
4299 9539 6.105333 CCATAATCTTGAGAATCGATCCTCC 58.895 44.000 9.36 0.00 38.61 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.