AutoCloner

Multiple sequence alignment - TraesCS5D01G293100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS5D01G293100	chr5D	100.000	3272	0	0	1	3272	390416851	390420122	0.000000e+00	6043.0
1	TraesCS5D01G293100	chr5D	100.000	1670	0	0	4242	5911	390421092	390422761	0.000000e+00	3085.0
2	TraesCS5D01G293100	chr5D	86.120	1268	81	32	734	1994	390371256	390372435	0.000000e+00	1279.0
3	TraesCS5D01G293100	chr5D	100.000	606	0	0	3507	4112	390420357	390420962	0.000000e+00	1120.0
4	TraesCS5D01G293100	chr5D	81.213	1006	129	38	997	1980	390504139	390505106	0.000000e+00	756.0
5	TraesCS5D01G293100	chr5D	79.479	653	97	19	94	722	416590136	416589497	4.230000e-116	429.0
6	TraesCS5D01G293100	chr5D	85.602	382	49	5	3613	3990	227005764	227005385	4.290000e-106	396.0
7	TraesCS5D01G293100	chr5D	79.775	534	82	20	1000	1532	389461603	389461095	1.210000e-96	364.0
8	TraesCS5D01G293100	chr5D	77.869	488	87	8	177	657	73503331	73503804	3.490000e-72	283.0
9	TraesCS5D01G293100	chr5D	75.305	656	115	25	97	722	384882616	384883254	2.710000e-68	270.0
10	TraesCS5D01G293100	chr5D	75.387	581	108	16	97	653	9127399	9126830	1.270000e-61	248.0
11	TraesCS5D01G293100	chr5D	91.791	134	11	0	2907	3040	390372524	390372657	2.810000e-43	187.0
12	TraesCS5D01G293100	chr5D	91.176	136	11	1	3035	3170	390372535	390372669	3.640000e-42	183.0
13	TraesCS5D01G293100	chr5D	89.916	119	11	1	3035	3153	390419768	390419885	1.030000e-32	152.0
14	TraesCS5D01G293100	chr5D	89.916	119	11	1	2918	3035	390419885	390420003	1.030000e-32	152.0
15	TraesCS5D01G293100	chr5D	76.163	172	29	9	2648	2813	507841340	507841175	4.910000e-11	80.5
16	TraesCS5D01G293100	chr5D	84.810	79	8	4	2188	2263	45493606	45493683	6.350000e-10	76.8
17	TraesCS5D01G293100	chr5B	94.508	2021	68	15	1	2002	470511112	470513108	0.000000e+00	3077.0
18	TraesCS5D01G293100	chr5B	91.931	1673	122	7	4242	5909	470514646	470516310	0.000000e+00	2329.0
19	TraesCS5D01G293100	chr5B	86.435	1268	87	40	734	1988	470435768	470436963	0.000000e+00	1310.0
20	TraesCS5D01G293100	chr5B	94.577	461	21	4	2815	3272	470513359	470513818	0.000000e+00	710.0
21	TraesCS5D01G293100	chr5B	87.002	577	57	6	3539	4103	470514065	470514635	8.360000e-178	634.0
22	TraesCS5D01G293100	chr5B	80.374	535	77	22	1000	1532	469125058	469124550	1.200000e-101	381.0
23	TraesCS5D01G293100	chr5B	82.022	356	29	18	1193	1547	470604048	470604369	2.710000e-68	270.0
24	TraesCS5D01G293100	chr5B	87.903	124	15	0	2690	2813	48874824	48874701	4.770000e-31	147.0
25	TraesCS5D01G293100	chr5B	80.645	186	20	9	1	186	568833431	568833600	4.810000e-26	130.0
26	TraesCS5D01G293100	chr5B	92.308	52	3	1	2583	2633	679222706	679222655	8.220000e-09	73.1
27	TraesCS5D01G293100	chr5B	91.667	48	4	0	2577	2624	48874938	48874891	3.820000e-07	67.6
28	TraesCS5D01G293100	chr5B	100.000	32	0	0	2592	2623	109210045	109210076	6.400000e-05	60.2
29	TraesCS5D01G293100	chr5A	91.926	1350	61	21	860	2180	493779210	493780540	0.000000e+00	1845.0
30	TraesCS5D01G293100	chr5A	92.127	1194	65	11	4242	5428	493781860	493783031	0.000000e+00	1657.0
31	TraesCS5D01G293100	chr5A	85.636	1274	100	39	734	1988	493661920	493663129	0.000000e+00	1262.0
32	TraesCS5D01G293100	chr5A	86.983	822	102	4	5095	5911	673834737	673835558	0.000000e+00	920.0
33	TraesCS5D01G293100	chr5A	85.472	826	106	12	5095	5911	415159447	415160267	0.000000e+00	848.0
34	TraesCS5D01G293100	chr5A	84.469	895	88	28	1	862	493775709	493776585	0.000000e+00	835.0
35	TraesCS5D01G293100	chr5A	83.965	792	83	27	994	1775	493817929	493817172	0.000000e+00	719.0
36	TraesCS5D01G293100	chr5A	94.397	464	19	4	2815	3272	493780534	493780996	0.000000e+00	706.0
37	TraesCS5D01G293100	chr5A	90.130	385	26	7	3507	3879	493781038	493781422	1.910000e-134	490.0
38	TraesCS5D01G293100	chr5A	78.328	586	92	17	97	651	378486790	378486209	4.380000e-91	346.0
39	TraesCS5D01G293100	chr5A	92.531	241	18	0	3872	4112	493781601	493781841	4.380000e-91	346.0
40	TraesCS5D01G293100	chr5A	79.259	540	65	34	1000	1532	492637156	492636657	3.410000e-87	333.0
41	TraesCS5D01G293100	chr5A	75.739	643	107	22	97	706	667892308	667892934	1.620000e-70	278.0
42	TraesCS5D01G293100	chr5A	75.501	649	112	27	97	721	592063499	592062874	2.100000e-69	274.0
43	TraesCS5D01G293100	chr5A	73.401	594	91	26	93	655	476355117	476355674	6.130000e-35	159.0
44	TraesCS5D01G293100	chr5A	90.833	120	10	1	2918	3036	493780759	493780878	6.130000e-35	159.0
45	TraesCS5D01G293100	chr5A	88.235	119	13	1	3035	3153	493780642	493780759	2.220000e-29	141.0
46	TraesCS5D01G293100	chr7B	87.113	807	91	10	5094	5891	99137675	99138477	0.000000e+00	902.0
47	TraesCS5D01G293100	chr7B	86.089	381	48	4	3613	3990	708310700	708311078	7.130000e-109	405.0
48	TraesCS5D01G293100	chr7B	87.654	81	7	2	2189	2266	323587483	323587403	2.270000e-14	91.6
49	TraesCS5D01G293100	chr7B	80.342	117	11	4	2583	2688	591330850	591330965	1.770000e-10	78.7
50	TraesCS5D01G293100	chr7B	73.279	247	47	13	2583	2812	683464189	683464433	8.220000e-09	73.1
51	TraesCS5D01G293100	chr7D	86.336	827	96	13	5094	5911	498253570	498252752	0.000000e+00	885.0
52	TraesCS5D01G293100	chr7D	85.784	816	99	12	5105	5911	632809231	632808424	0.000000e+00	848.0
53	TraesCS5D01G293100	chr7D	85.864	382	48	5	3613	3990	592054594	592054973	9.230000e-108	401.0
54	TraesCS5D01G293100	chr7D	77.454	652	107	23	108	722	206682797	206683445	2.620000e-93	353.0
55	TraesCS5D01G293100	chr7D	77.572	593	91	22	94	651	467442364	467442949	2.660000e-83	320.0
56	TraesCS5D01G293100	chr7D	78.231	294	34	11	94	357	169909104	169909397	1.700000e-35	161.0
57	TraesCS5D01G293100	chr7D	81.622	185	34	0	1356	1540	235397089	235396905	2.850000e-33	154.0
58	TraesCS5D01G293100	chr7D	91.489	94	7	1	94	186	246527428	246527521	1.730000e-25	128.0
59	TraesCS5D01G293100	chr7D	79.851	134	22	5	2682	2813	517106676	517106806	6.310000e-15	93.5
60	TraesCS5D01G293100	chr7D	78.195	133	27	2	2682	2813	528565520	528565651	3.800000e-12	84.2
61	TraesCS5D01G293100	chr7D	93.023	43	1	2	2583	2624	30240003	30240044	1.780000e-05	62.1
62	TraesCS5D01G293100	chr7D	88.000	50	6	0	2214	2263	46539884	46539933	6.400000e-05	60.2
63	TraesCS5D01G293100	chr7D	100.000	29	0	0	2385	2413	610728304	610728276	3.000000e-03	54.7
64	TraesCS5D01G293100	chr3A	85.818	825	102	14	5095	5908	328930054	328930874	0.000000e+00	861.0
65	TraesCS5D01G293100	chr3A	87.143	70	7	2	2210	2278	675121086	675121018	1.770000e-10	78.7
66	TraesCS5D01G293100	chr3A	100.000	33	0	0	2577	2609	128720572	128720540	1.780000e-05	62.1
67	TraesCS5D01G293100	chr6B	85.785	809	103	10	5101	5902	116748133	116748936	0.000000e+00	846.0
68	TraesCS5D01G293100	chr6B	85.140	821	108	13	5098	5909	90106142	90105327	0.000000e+00	828.0
69	TraesCS5D01G293100	chr6B	83.721	86	9	5	2188	2270	704406458	704406375	6.350000e-10	76.8
70	TraesCS5D01G293100	chr6B	96.875	32	1	0	2593	2624	281221491	281221522	3.000000e-03	54.7
71	TraesCS5D01G293100	chr6B	100.000	28	0	0	2244	2271	191538151	191538124	1.100000e-02	52.8
72	TraesCS5D01G293100	chr3D	81.848	617	68	27	996	1604	564806674	564807254	4.140000e-131	479.0
73	TraesCS5D01G293100	chr3D	76.730	679	116	20	68	722	174435975	174436635	2.040000e-89	340.0
74	TraesCS5D01G293100	chr3D	73.921	556	98	30	94	625	155711581	155711049	4.710000e-41	180.0
75	TraesCS5D01G293100	chr3D	77.064	327	45	5	97	393	467481997	467481671	1.700000e-35	161.0
76	TraesCS5D01G293100	chr3D	72.852	582	103	26	94	642	155697100	155696541	1.330000e-31	148.0
77	TraesCS5D01G293100	chr3D	86.029	136	19	0	108	243	473485980	473485845	4.770000e-31	147.0
78	TraesCS5D01G293100	chr3D	91.111	90	8	0	97	186	3166251	3166340	8.040000e-24	122.0
79	TraesCS5D01G293100	chr3D	80.597	134	23	3	2681	2813	13267086	13267217	3.770000e-17	100.0
80	TraesCS5D01G293100	chr2B	86.162	383	46	6	3613	3990	474556778	474556398	1.980000e-109	407.0
81	TraesCS5D01G293100	chr2B	82.716	162	26	2	497	657	89009491	89009331	6.170000e-30	143.0
82	TraesCS5D01G293100	chr2B	93.684	95	6	0	94	188	93106039	93106133	6.170000e-30	143.0
83	TraesCS5D01G293100	chr2B	75.743	202	38	11	2617	2813	632009713	632009908	2.270000e-14	91.6
84	TraesCS5D01G293100	chr2B	82.927	82	11	2	2188	2266	675291842	675291923	2.960000e-08	71.3
85	TraesCS5D01G293100	chr4A	85.974	385	46	5	3613	3991	455931648	455932030	7.130000e-109	405.0
86	TraesCS5D01G293100	chr4A	79.275	386	56	13	97	461	174106737	174106355	1.270000e-61	248.0
87	TraesCS5D01G293100	chr4A	100.000	28	0	0	2385	2412	658955628	658955655	1.100000e-02	52.8
88	TraesCS5D01G293100	chr4B	86.198	384	39	6	3613	3990	395310862	395311237	2.570000e-108	403.0
89	TraesCS5D01G293100	chr4B	77.700	574	89	12	94	643	380691446	380692004	1.240000e-81	315.0
90	TraesCS5D01G293100	chr4B	77.843	510	97	12	107	606	116060644	116060141	9.630000e-78	302.0
91	TraesCS5D01G293100	chr1A	85.864	382	50	3	3613	3990	451376067	451375686	2.570000e-108	403.0
92	TraesCS5D01G293100	chr1A	85.864	382	47	4	3613	3991	253385746	253386123	3.320000e-107	399.0
93	TraesCS5D01G293100	chr1A	76.682	669	122	13	78	722	557991140	557990482	2.040000e-89	340.0
94	TraesCS5D01G293100	chr1A	76.391	593	99	17	96	657	131281988	131282570	1.250000e-71	281.0
95	TraesCS5D01G293100	chr1A	100.000	32	0	0	2577	2608	389767091	389767122	6.400000e-05	60.2
96	TraesCS5D01G293100	chr6D	78.086	648	109	22	97	724	346270060	346270694	4.320000e-101	379.0
97	TraesCS5D01G293100	chr6D	75.624	681	117	22	1	657	50644476	50645131	5.790000e-75	292.0
98	TraesCS5D01G293100	chr6D	74.559	397	59	21	97	469	224196990	224197368	1.030000e-27	135.0
99	TraesCS5D01G293100	chr6D	75.263	380	44	31	100	451	330571400	330571043	1.030000e-27	135.0
100	TraesCS5D01G293100	chr6D	74.684	395	56	20	100	469	376040654	376040279	1.030000e-27	135.0
101	TraesCS5D01G293100	chr6D	74.559	397	55	22	100	469	317997934	317997557	1.340000e-26	132.0
102	TraesCS5D01G293100	chr6D	73.698	384	79	18	100	469	208915995	208915620	4.810000e-26	130.0
103	TraesCS5D01G293100	chr6D	73.947	380	55	19	97	451	143196053	143196413	4.840000e-21	113.0
104	TraesCS5D01G293100	chr6D	84.706	85	13	0	573	657	433352133	433352049	1.060000e-12	86.1
105	TraesCS5D01G293100	chr6D	78.014	141	24	6	2675	2812	450531075	450530939	1.370000e-11	82.4
106	TraesCS5D01G293100	chr6D	76.712	146	28	6	2682	2824	62138324	62138182	6.350000e-10	76.8
107	TraesCS5D01G293100	chr6D	87.037	54	7	0	2760	2813	327600906	327600853	1.780000e-05	62.1
108	TraesCS5D01G293100	chr6D	100.000	28	0	0	2385	2412	30296820	30296793	1.100000e-02	52.8
109	TraesCS5D01G293100	chr2D	77.607	652	110	20	94	722	561824914	561825552	4.350000e-96	363.0
110	TraesCS5D01G293100	chr2D	77.444	399	66	12	279	672	348288271	348287892	3.590000e-52	217.0
111	TraesCS5D01G293100	chr2D	74.703	589	93	32	94	657	553255507	553254950	1.670000e-50	211.0
112	TraesCS5D01G293100	chr2D	78.061	196	37	6	2621	2813	567391445	567391253	1.040000e-22	119.0
113	TraesCS5D01G293100	chr2D	75.481	208	46	5	2617	2822	46287456	46287252	4.880000e-16	97.1
114	TraesCS5D01G293100	chr2D	83.562	73	10	2	2206	2277	11557982	11557911	3.820000e-07	67.6
115	TraesCS5D01G293100	chr1D	77.872	592	109	16	97	672	416406466	416407051	1.220000e-91	348.0
116	TraesCS5D01G293100	chr1D	78.022	364	41	22	101	447	387187844	387187503	6.050000e-45	193.0
117	TraesCS5D01G293100	chr1D	74.659	367	49	23	100	441	350415570	350415223	8.040000e-24	122.0
118	TraesCS5D01G293100	chr1D	83.036	112	18	1	2702	2812	436145364	436145253	3.770000e-17	100.0
119	TraesCS5D01G293100	chr1D	82.292	96	13	4	2717	2811	48891357	48891265	4.910000e-11	80.5
120	TraesCS5D01G293100	chr1D	74.603	189	42	6	2628	2813	251986282	251986097	1.770000e-10	78.7
121	TraesCS5D01G293100	chr1D	79.646	113	18	4	2702	2812	447334768	447334877	6.350000e-10	76.8
122	TraesCS5D01G293100	chr7A	76.352	647	117	19	94	717	730891760	730891127	1.240000e-81	315.0
123	TraesCS5D01G293100	chr7A	74.888	669	104	37	1	622	639298705	639298054	4.580000e-61	246.0
124	TraesCS5D01G293100	chr7A	76.042	384	64	20	82	442	458908837	458909215	2.190000e-39	174.0
125	TraesCS5D01G293100	chr7A	82.162	185	33	0	1356	1540	250327014	250326830	6.130000e-35	159.0
126	TraesCS5D01G293100	chr7A	90.741	54	5	0	2210	2263	483756205	483756258	8.220000e-09	73.1
127	TraesCS5D01G293100	chr4D	76.526	639	108	26	97	706	450533898	450534523	1.600000e-80	311.0
128	TraesCS5D01G293100	chr4D	76.207	580	95	16	100	657	303846343	303846901	3.510000e-67	267.0
129	TraesCS5D01G293100	chr4D	76.034	580	90	25	97	651	298899407	298899962	7.600000e-64	255.0
130	TraesCS5D01G293100	chr4D	74.684	395	56	21	100	469	100646360	100645985	1.030000e-27	135.0
131	TraesCS5D01G293100	chr4D	92.473	93	7	0	96	188	475190570	475190478	3.720000e-27	134.0
132	TraesCS5D01G293100	chr4D	80.628	191	19	8	98	272	499731255	499731443	1.340000e-26	132.0
133	TraesCS5D01G293100	chr4D	79.885	174	33	2	279	451	403707793	403707965	6.220000e-25	126.0
134	TraesCS5D01G293100	chr4D	78.947	133	26	2	2682	2813	488768580	488768711	8.160000e-14	89.8
135	TraesCS5D01G293100	chr4D	81.633	98	17	1	2716	2813	118424867	118424963	4.910000e-11	80.5
136	TraesCS5D01G293100	chr4D	77.612	134	28	2	2681	2813	489163452	489163584	4.910000e-11	80.5
137	TraesCS5D01G293100	chr4D	79.612	103	17	4	2713	2813	470199439	470199539	2.960000e-08	71.3
138	TraesCS5D01G293100	chr3B	84.586	266	34	5	1346	1604	752301609	752301874	2.110000e-64	257.0
139	TraesCS5D01G293100	chr3B	76.301	346	59	11	100	441	165244806	165244480	4.740000e-36	163.0
140	TraesCS5D01G293100	chr3B	77.982	218	45	3	507	722	684418805	684418589	3.720000e-27	134.0
141	TraesCS5D01G293100	chr3B	81.944	72	6	6	4015	4082	111944350	111944418	3.000000e-03	54.7
142	TraesCS5D01G293100	chr2A	74.576	649	115	19	94	722	693435393	693434775	7.660000e-59	239.0
143	TraesCS5D01G293100	chr2A	79.851	134	24	3	2681	2813	601831632	601831501	1.750000e-15	95.3
144	TraesCS5D01G293100	chr2A	79.570	93	14	4	2188	2277	102113105	102113195	1.780000e-05	62.1
145	TraesCS5D01G293100	chr1B	74.752	606	109	16	98	672	297335204	297335796	1.280000e-56	231.0
146	TraesCS5D01G293100	chr6A	76.331	338	55	11	115	451	311643899	311643586	2.210000e-34	158.0
147	TraesCS5D01G293100	chrUn	81.081	185	35	0	1356	1540	86054525	86054341	1.330000e-31	148.0
148	TraesCS5D01G293100	chrUn	74.930	359	44	21	100	432	21487261	21486923	8.040000e-24	122.0
149	TraesCS5D01G293100	chrUn	74.324	370	50	22	97	441	45633851	45634200	1.350000e-21	115.0
150	TraesCS5D01G293100	chrUn	73.077	364	80	14	100	451	26800377	26800020	4.840000e-21	113.0
151	TraesCS5D01G293100	chrUn	73.980	392	46	31	97	451	11135802	11136174	2.250000e-19	108.0
152	TraesCS5D01G293100	chrUn	73.980	392	46	30	97	451	260371308	260371680	2.250000e-19	108.0
153	TraesCS5D01G293100	chrUn	72.849	372	77	19	97	453	74048816	74049178	8.100000e-19	106.0
154	TraesCS5D01G293100	chrUn	73.464	407	52	23	100	469	99295605	99295218	1.050000e-17	102.0
155	TraesCS5D01G293100	chrUn	72.864	398	70	25	100	469	100161568	100161181	1.050000e-17	102.0
156	TraesCS5D01G293100	chrUn	91.667	72	6	0	100	171	91585684	91585613	3.770000e-17	100.0
157	TraesCS5D01G293100	chrUn	85.714	91	13	0	97	187	298083798	298083888	4.880000e-16	97.1
158	TraesCS5D01G293100	chrUn	74.180	244	49	11	2583	2813	28924398	28924640	8.160000e-14	89.8
159	TraesCS5D01G293100	chrUn	79.808	104	15	6	2713	2813	10396238	10396138	2.960000e-08	71.3
160	TraesCS5D01G293100	chrUn	77.876	113	21	4	2702	2813	377706146	377706255	3.820000e-07	67.6
161	TraesCS5D01G293100	chrUn	75.735	136	28	5	2680	2813	344735060	344735192	4.950000e-06	63.9
162	TraesCS5D01G293100	chrUn	77.551	98	19	3	2717	2813	66804954	66804859	8.280000e-04	56.5
163	TraesCS5D01G293100	chrUn	86.275	51	7	0	2763	2813	132176399	132176349	8.280000e-04	56.5

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS5D01G293100	chr5D	390416851	390422761	5910	False	2110.400000	6043	95.966400	1	5911	5	chr5D.!!$F6	5910
1	TraesCS5D01G293100	chr5D	390504139	390505106	967	False	756.000000	756	81.213000	997	1980	1	chr5D.!!$F4	983
2	TraesCS5D01G293100	chr5D	390371256	390372669	1413	False	549.666667	1279	89.695667	734	3170	3	chr5D.!!$F5	2436
3	TraesCS5D01G293100	chr5D	416589497	416590136	639	True	429.000000	429	79.479000	94	722	1	chr5D.!!$R4	628
4	TraesCS5D01G293100	chr5D	389461095	389461603	508	True	364.000000	364	79.775000	1000	1532	1	chr5D.!!$R3	532
5	TraesCS5D01G293100	chr5D	384882616	384883254	638	False	270.000000	270	75.305000	97	722	1	chr5D.!!$F3	625
6	TraesCS5D01G293100	chr5D	9126830	9127399	569	True	248.000000	248	75.387000	97	653	1	chr5D.!!$R1	556
7	TraesCS5D01G293100	chr5B	470511112	470516310	5198	False	1687.500000	3077	92.004500	1	5909	4	chr5B.!!$F5	5908
8	TraesCS5D01G293100	chr5B	470435768	470436963	1195	False	1310.000000	1310	86.435000	734	1988	1	chr5B.!!$F2	1254
9	TraesCS5D01G293100	chr5B	469124550	469125058	508	True	381.000000	381	80.374000	1000	1532	1	chr5B.!!$R1	532
10	TraesCS5D01G293100	chr5A	493661920	493663129	1209	False	1262.000000	1262	85.636000	734	1988	1	chr5A.!!$F3	1254
11	TraesCS5D01G293100	chr5A	673834737	673835558	821	False	920.000000	920	86.983000	5095	5911	1	chr5A.!!$F5	816
12	TraesCS5D01G293100	chr5A	415159447	415160267	820	False	848.000000	848	85.472000	5095	5911	1	chr5A.!!$F1	816
13	TraesCS5D01G293100	chr5A	493775709	493783031	7322	False	772.375000	1845	90.581000	1	5428	8	chr5A.!!$F6	5427
14	TraesCS5D01G293100	chr5A	493817172	493817929	757	True	719.000000	719	83.965000	994	1775	1	chr5A.!!$R3	781
15	TraesCS5D01G293100	chr5A	378486209	378486790	581	True	346.000000	346	78.328000	97	651	1	chr5A.!!$R1	554
16	TraesCS5D01G293100	chr5A	667892308	667892934	626	False	278.000000	278	75.739000	97	706	1	chr5A.!!$F4	609
17	TraesCS5D01G293100	chr5A	592062874	592063499	625	True	274.000000	274	75.501000	97	721	1	chr5A.!!$R4	624
18	TraesCS5D01G293100	chr7B	99137675	99138477	802	False	902.000000	902	87.113000	5094	5891	1	chr7B.!!$F1	797
19	TraesCS5D01G293100	chr7D	498252752	498253570	818	True	885.000000	885	86.336000	5094	5911	1	chr7D.!!$R2	817
20	TraesCS5D01G293100	chr7D	632808424	632809231	807	True	848.000000	848	85.784000	5105	5911	1	chr7D.!!$R4	806
21	TraesCS5D01G293100	chr7D	206682797	206683445	648	False	353.000000	353	77.454000	108	722	1	chr7D.!!$F4	614
22	TraesCS5D01G293100	chr7D	467442364	467442949	585	False	320.000000	320	77.572000	94	651	1	chr7D.!!$F6	557
23	TraesCS5D01G293100	chr3A	328930054	328930874	820	False	861.000000	861	85.818000	5095	5908	1	chr3A.!!$F1	813
24	TraesCS5D01G293100	chr6B	116748133	116748936	803	False	846.000000	846	85.785000	5101	5902	1	chr6B.!!$F1	801
25	TraesCS5D01G293100	chr6B	90105327	90106142	815	True	828.000000	828	85.140000	5098	5909	1	chr6B.!!$R1	811
26	TraesCS5D01G293100	chr3D	564806674	564807254	580	False	479.000000	479	81.848000	996	1604	1	chr3D.!!$F4	608
27	TraesCS5D01G293100	chr3D	174435975	174436635	660	False	340.000000	340	76.730000	68	722	1	chr3D.!!$F3	654
28	TraesCS5D01G293100	chr4B	380691446	380692004	558	False	315.000000	315	77.700000	94	643	1	chr4B.!!$F1	549
29	TraesCS5D01G293100	chr4B	116060141	116060644	503	True	302.000000	302	77.843000	107	606	1	chr4B.!!$R1	499
30	TraesCS5D01G293100	chr1A	557990482	557991140	658	True	340.000000	340	76.682000	78	722	1	chr1A.!!$R2	644
31	TraesCS5D01G293100	chr1A	131281988	131282570	582	False	281.000000	281	76.391000	96	657	1	chr1A.!!$F1	561
32	TraesCS5D01G293100	chr6D	346270060	346270694	634	False	379.000000	379	78.086000	97	724	1	chr6D.!!$F4	627
33	TraesCS5D01G293100	chr6D	50644476	50645131	655	False	292.000000	292	75.624000	1	657	1	chr6D.!!$F1	656
34	TraesCS5D01G293100	chr2D	561824914	561825552	638	False	363.000000	363	77.607000	94	722	1	chr2D.!!$F1	628
35	TraesCS5D01G293100	chr2D	553254950	553255507	557	True	211.000000	211	74.703000	94	657	1	chr2D.!!$R4	563
36	TraesCS5D01G293100	chr1D	416406466	416407051	585	False	348.000000	348	77.872000	97	672	1	chr1D.!!$F1	575
37	TraesCS5D01G293100	chr7A	730891127	730891760	633	True	315.000000	315	76.352000	94	717	1	chr7A.!!$R3	623
38	TraesCS5D01G293100	chr7A	639298054	639298705	651	True	246.000000	246	74.888000	1	622	1	chr7A.!!$R2	621
39	TraesCS5D01G293100	chr4D	450533898	450534523	625	False	311.000000	311	76.526000	97	706	1	chr4D.!!$F5	609
40	TraesCS5D01G293100	chr4D	303846343	303846901	558	False	267.000000	267	76.207000	100	657	1	chr4D.!!$F3	557
41	TraesCS5D01G293100	chr4D	298899407	298899962	555	False	255.000000	255	76.034000	97	651	1	chr4D.!!$F2	554
42	TraesCS5D01G293100	chr2A	693434775	693435393	618	True	239.000000	239	74.576000	94	722	1	chr2A.!!$R2	628
43	TraesCS5D01G293100	chr1B	297335204	297335796	592	False	231.000000	231	74.752000	98	672	1	chr1B.!!$F1	574

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
974	3771	0.107410	AGCACCAAACCACGAGTGAA	60.107	50.000	4.59	0.00	31.79	3.18	F
2184	5151	0.032912	TACCCACATCTACGAGGCCA	60.033	55.000	5.01	0.00	0.00	5.36	F
2328	5295	0.028242	CGTCAGCCAGCTACTACGAG	59.972	60.000	13.14	0.00	31.77	4.18	F
2411	5378	0.032416	ATAGTCTGTGGCGGTAGGGT	60.032	55.000	0.00	0.00	0.00	4.34	F
2530	5497	0.033504	GGCACTCCTTTCTGTGACGA	59.966	55.000	0.00	0.00	36.38	4.20	F
2575	5542	0.035820	GTTCCACATCCTACCGCCAA	60.036	55.000	0.00	0.00	0.00	4.52	F
2598	5565	0.102481	CGTATAACTGCTCGCACCCT	59.898	55.000	0.00	0.00	0.00	4.34	F
2683	5650	0.250727	TTACTGACAGGGTGCTTGGC	60.251	55.000	7.51	0.00	0.00	4.52	F
2738	5705	0.326927	CGGTAAGAAAAGGGGCCAGA	59.673	55.000	4.39	0.00	0.00	3.86	F
2739	5706	1.064685	CGGTAAGAAAAGGGGCCAGAT	60.065	52.381	4.39	0.00	0.00	2.90	F
4784	7959	1.203050	ACCACATTGTTCTTCCCTGGG	60.203	52.381	6.33	6.33	0.00	4.45	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
2309	5276	0.028242	CTCGTAGTAGCTGGCTGACG	59.972	60.000	15.32	15.32	32.85	4.35	R
3676	6661	0.109226	GACTTCCTCTCGTGGTTCGG	60.109	60.000	0.00	0.00	40.32	4.30	R
3874	6861	0.833287	CATCCCGATGGGTGACTTCT	59.167	55.000	1.04	0.00	44.74	2.85	R
4341	7514	1.372683	GAGCTTGTCCTGCAGACCA	59.627	57.895	17.39	8.32	45.68	4.02	R
4568	7743	6.169094	ACTATTGATCTGGATATTTGGCTCG	58.831	40.000	0.00	0.00	0.00	5.03	R
4640	7815	3.680490	TCGTGCAAAGATAAATGTCCCA	58.320	40.909	0.00	0.00	0.00	4.37	R
4658	7833	1.202463	GCATGCAGGTCATACTCTCGT	60.202	52.381	14.21	0.00	33.19	4.18	R
4696	7871	3.766151	CGAGATCGCCAGTTTACTTACA	58.234	45.455	0.00	0.00	0.00	2.41	R
4784	7959	5.077424	CGGTTTTAGTTGTTATCTTCGTGC	58.923	41.667	0.00	0.00	0.00	5.34	R
4790	7965	6.567891	GCAAAGAGCGGTTTTAGTTGTTATCT	60.568	38.462	0.00	0.00	0.00	1.98	R
5753	8956	0.181587	TGCTCCGAACCTGGTCAAAA	59.818	50.000	0.00	0.00	0.00	2.44	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
333	429	1.995626	CCCACGAGATTCCCCTGGT	60.996	63.158	0.00	0.00	0.00	4.00
814	969	4.708726	ATGAAAGGTGCATTAGAAGTGC	57.291	40.909	0.00	0.00	42.81	4.40
927	3722	0.165944	CGCATTTGTCCAACTCGACC	59.834	55.000	0.00	0.00	31.35	4.79
934	3729	3.587797	TGTCCAACTCGACCTGATTAC	57.412	47.619	0.00	0.00	31.35	1.89
974	3771	0.107410	AGCACCAAACCACGAGTGAA	60.107	50.000	4.59	0.00	31.79	3.18
1149	3949	0.100682	GCCTCGTCATCTACTTCGCA	59.899	55.000	0.00	0.00	0.00	5.10
1587	4428	4.796231	GGCGCGCGAGAAGAAGGA	62.796	66.667	37.18	0.00	0.00	3.36
1590	4431	1.585002	CGCGCGAGAAGAAGGAGAG	60.585	63.158	28.94	0.00	0.00	3.20
1731	4575	4.289312	GGCAACCCGAACGTGTAT	57.711	55.556	0.00	0.00	0.00	2.29
1780	4624	1.605451	GTGGCAAACAGGTACCCCC	60.605	63.158	8.74	0.42	0.00	5.40
1812	4668	6.697455	CAGCAGATTAGTGAGTAGCGATTTTA	59.303	38.462	0.00	0.00	0.00	1.52
2007	4946	7.588512	ACTACTCTCTTCGTTTACAAATACGT	58.411	34.615	0.00	0.00	38.79	3.57
2008	4947	8.721478	ACTACTCTCTTCGTTTACAAATACGTA	58.279	33.333	0.00	0.00	38.79	3.57
2009	4948	9.208169	CTACTCTCTTCGTTTACAAATACGTAG	57.792	37.037	0.08	0.00	38.79	3.51
2178	5145	3.004862	GGTTTTGGTACCCACATCTACG	58.995	50.000	10.07	0.00	30.78	3.51
2179	5146	3.306919	GGTTTTGGTACCCACATCTACGA	60.307	47.826	10.07	0.00	30.78	3.43
2180	5147	3.880047	TTTGGTACCCACATCTACGAG	57.120	47.619	10.07	0.00	30.78	4.18
2181	5148	1.771565	TGGTACCCACATCTACGAGG	58.228	55.000	10.07	0.00	0.00	4.63
2182	5149	0.388294	GGTACCCACATCTACGAGGC	59.612	60.000	0.00	0.00	0.00	4.70
2183	5150	0.388294	GTACCCACATCTACGAGGCC	59.612	60.000	0.00	0.00	0.00	5.19
2184	5151	0.032912	TACCCACATCTACGAGGCCA	60.033	55.000	5.01	0.00	0.00	5.36
2185	5152	0.907704	ACCCACATCTACGAGGCCAA	60.908	55.000	5.01	0.00	0.00	4.52
2186	5153	0.251916	CCCACATCTACGAGGCCAAA	59.748	55.000	5.01	0.00	0.00	3.28
2187	5154	1.134098	CCCACATCTACGAGGCCAAAT	60.134	52.381	5.01	0.00	0.00	2.32
2188	5155	2.643551	CCACATCTACGAGGCCAAATT	58.356	47.619	5.01	0.00	0.00	1.82
2189	5156	3.016736	CCACATCTACGAGGCCAAATTT	58.983	45.455	5.01	0.00	0.00	1.82
2190	5157	3.443681	CCACATCTACGAGGCCAAATTTT	59.556	43.478	5.01	0.00	0.00	1.82
2191	5158	4.414852	CACATCTACGAGGCCAAATTTTG	58.585	43.478	5.01	1.99	0.00	2.44
2192	5159	4.155826	CACATCTACGAGGCCAAATTTTGA	59.844	41.667	5.01	0.00	0.00	2.69
2193	5160	4.156008	ACATCTACGAGGCCAAATTTTGAC	59.844	41.667	5.01	0.00	0.00	3.18
2194	5161	3.078837	TCTACGAGGCCAAATTTTGACC	58.921	45.455	5.01	8.51	32.74	4.02
2195	5162	0.966179	ACGAGGCCAAATTTTGACCC	59.034	50.000	5.01	9.91	33.05	4.46
2196	5163	1.256812	CGAGGCCAAATTTTGACCCT	58.743	50.000	16.36	16.36	33.05	4.34
2197	5164	1.618343	CGAGGCCAAATTTTGACCCTT	59.382	47.619	5.01	0.00	33.05	3.95
2198	5165	2.610232	CGAGGCCAAATTTTGACCCTTG	60.610	50.000	5.01	13.58	33.05	3.61
2199	5166	2.368548	GAGGCCAAATTTTGACCCTTGT	59.631	45.455	5.01	0.00	33.05	3.16
2200	5167	2.368548	AGGCCAAATTTTGACCCTTGTC	59.631	45.455	5.01	0.00	42.12	3.18
2211	5178	3.664107	TGACCCTTGTCAGAGAAAATCG	58.336	45.455	0.00	0.00	46.40	3.34
2212	5179	3.323691	TGACCCTTGTCAGAGAAAATCGA	59.676	43.478	0.00	0.00	46.40	3.59
2213	5180	3.929610	GACCCTTGTCAGAGAAAATCGAG	59.070	47.826	0.00	0.00	41.37	4.04
2214	5181	3.578716	ACCCTTGTCAGAGAAAATCGAGA	59.421	43.478	0.00	0.00	0.00	4.04
2215	5182	4.223923	ACCCTTGTCAGAGAAAATCGAGAT	59.776	41.667	0.00	0.00	0.00	2.75
2216	5183	4.808364	CCCTTGTCAGAGAAAATCGAGATC	59.192	45.833	0.00	0.00	0.00	2.75
2217	5184	5.395103	CCCTTGTCAGAGAAAATCGAGATCT	60.395	44.000	0.00	0.00	0.00	2.75
2218	5185	5.519566	CCTTGTCAGAGAAAATCGAGATCTG	59.480	44.000	0.00	5.69	38.97	2.90
2219	5186	5.904362	TGTCAGAGAAAATCGAGATCTGA	57.096	39.130	0.00	11.50	42.98	3.27
2221	5188	5.255710	TCAGAGAAAATCGAGATCTGACC	57.744	43.478	0.00	0.00	40.98	4.02
2222	5189	4.098654	TCAGAGAAAATCGAGATCTGACCC	59.901	45.833	0.00	0.00	40.98	4.46
2223	5190	4.099266	CAGAGAAAATCGAGATCTGACCCT	59.901	45.833	0.00	0.00	39.80	4.34
2224	5191	5.300539	CAGAGAAAATCGAGATCTGACCCTA	59.699	44.000	0.00	0.00	39.80	3.53
2225	5192	5.300792	AGAGAAAATCGAGATCTGACCCTAC	59.699	44.000	0.00	0.00	0.00	3.18
2226	5193	5.205056	AGAAAATCGAGATCTGACCCTACT	58.795	41.667	0.00	0.00	0.00	2.57
2227	5194	5.659079	AGAAAATCGAGATCTGACCCTACTT	59.341	40.000	0.00	0.00	0.00	2.24
2228	5195	5.523438	AAATCGAGATCTGACCCTACTTC	57.477	43.478	0.00	0.00	0.00	3.01
2229	5196	3.646736	TCGAGATCTGACCCTACTTCA	57.353	47.619	0.00	0.00	0.00	3.02
2230	5197	3.964411	TCGAGATCTGACCCTACTTCAA	58.036	45.455	0.00	0.00	0.00	2.69
2231	5198	4.341487	TCGAGATCTGACCCTACTTCAAA	58.659	43.478	0.00	0.00	0.00	2.69
2232	5199	4.956700	TCGAGATCTGACCCTACTTCAAAT	59.043	41.667	0.00	0.00	0.00	2.32
2233	5200	5.422331	TCGAGATCTGACCCTACTTCAAATT	59.578	40.000	0.00	0.00	0.00	1.82
2234	5201	5.521735	CGAGATCTGACCCTACTTCAAATTG	59.478	44.000	0.00	0.00	0.00	2.32
2235	5202	6.380079	AGATCTGACCCTACTTCAAATTGT	57.620	37.500	0.00	0.00	0.00	2.71
2236	5203	6.784031	AGATCTGACCCTACTTCAAATTGTT	58.216	36.000	0.00	0.00	0.00	2.83
2237	5204	7.234355	AGATCTGACCCTACTTCAAATTGTTT	58.766	34.615	0.00	0.00	0.00	2.83
2238	5205	7.725844	AGATCTGACCCTACTTCAAATTGTTTT	59.274	33.333	0.00	0.00	0.00	2.43
2239	5206	7.654022	TCTGACCCTACTTCAAATTGTTTTT	57.346	32.000	0.00	0.00	0.00	1.94
2240	5207	7.488322	TCTGACCCTACTTCAAATTGTTTTTG	58.512	34.615	0.00	0.00	0.00	2.44
2241	5208	7.340743	TCTGACCCTACTTCAAATTGTTTTTGA	59.659	33.333	0.00	0.00	36.71	2.69
2242	5209	7.841956	TGACCCTACTTCAAATTGTTTTTGAA	58.158	30.769	11.68	11.68	43.62	2.69
2243	5210	8.314751	TGACCCTACTTCAAATTGTTTTTGAAA	58.685	29.630	12.86	1.58	44.67	2.69
2244	5211	9.325198	GACCCTACTTCAAATTGTTTTTGAAAT	57.675	29.630	12.86	7.29	44.67	2.17
2245	5212	9.325198	ACCCTACTTCAAATTGTTTTTGAAATC	57.675	29.630	12.86	0.00	44.67	2.17
2246	5213	9.546428	CCCTACTTCAAATTGTTTTTGAAATCT	57.454	29.630	12.86	3.93	44.67	2.40
2250	5217	8.882736	ACTTCAAATTGTTTTTGAAATCTGACC	58.117	29.630	12.86	0.00	44.67	4.02
2251	5218	7.784633	TCAAATTGTTTTTGAAATCTGACCC	57.215	32.000	0.00	0.00	35.69	4.46
2252	5219	7.563906	TCAAATTGTTTTTGAAATCTGACCCT	58.436	30.769	0.00	0.00	35.69	4.34
2253	5220	8.046107	TCAAATTGTTTTTGAAATCTGACCCTT	58.954	29.630	0.00	0.00	35.69	3.95
2254	5221	8.676401	CAAATTGTTTTTGAAATCTGACCCTTT	58.324	29.630	0.00	0.00	0.00	3.11
2255	5222	8.806429	AATTGTTTTTGAAATCTGACCCTTTT	57.194	26.923	0.00	0.00	0.00	2.27
2256	5223	7.608308	TTGTTTTTGAAATCTGACCCTTTTG	57.392	32.000	0.00	0.00	0.00	2.44
2257	5224	5.584251	TGTTTTTGAAATCTGACCCTTTTGC	59.416	36.000	0.00	0.00	0.00	3.68
2258	5225	5.612725	TTTTGAAATCTGACCCTTTTGCT	57.387	34.783	0.00	0.00	0.00	3.91
2259	5226	6.723298	TTTTGAAATCTGACCCTTTTGCTA	57.277	33.333	0.00	0.00	0.00	3.49
2260	5227	5.705609	TTGAAATCTGACCCTTTTGCTAC	57.294	39.130	0.00	0.00	0.00	3.58
2261	5228	4.079253	TGAAATCTGACCCTTTTGCTACC	58.921	43.478	0.00	0.00	0.00	3.18
2262	5229	2.403252	ATCTGACCCTTTTGCTACCG	57.597	50.000	0.00	0.00	0.00	4.02
2263	5230	1.053424	TCTGACCCTTTTGCTACCGT	58.947	50.000	0.00	0.00	0.00	4.83
2264	5231	1.001633	TCTGACCCTTTTGCTACCGTC	59.998	52.381	0.00	0.00	0.00	4.79
2265	5232	0.759959	TGACCCTTTTGCTACCGTCA	59.240	50.000	0.00	0.00	0.00	4.35
2266	5233	1.349688	TGACCCTTTTGCTACCGTCAT	59.650	47.619	0.00	0.00	0.00	3.06
2267	5234	1.737793	GACCCTTTTGCTACCGTCATG	59.262	52.381	0.00	0.00	0.00	3.07
2268	5235	1.094785	CCCTTTTGCTACCGTCATGG	58.905	55.000	0.00	0.00	46.41	3.66
2269	5236	1.094785	CCTTTTGCTACCGTCATGGG	58.905	55.000	0.00	0.00	44.64	4.00
2270	5237	1.613255	CCTTTTGCTACCGTCATGGGT	60.613	52.381	0.00	0.00	44.64	4.51
2271	5238	1.737793	CTTTTGCTACCGTCATGGGTC	59.262	52.381	0.00	0.00	44.64	4.46
2272	5239	0.035820	TTTGCTACCGTCATGGGTCC	60.036	55.000	0.00	0.00	44.64	4.46
2273	5240	0.907704	TTGCTACCGTCATGGGTCCT	60.908	55.000	0.00	0.00	44.64	3.85
2274	5241	1.144057	GCTACCGTCATGGGTCCTG	59.856	63.158	0.00	0.00	44.64	3.86
2275	5242	1.823295	CTACCGTCATGGGTCCTGG	59.177	63.158	0.00	0.00	44.64	4.45
2276	5243	2.311688	CTACCGTCATGGGTCCTGGC	62.312	65.000	0.00	0.00	44.64	4.85
2277	5244	3.716195	CCGTCATGGGTCCTGGCA	61.716	66.667	0.00	0.00	0.00	4.92
2278	5245	2.436646	CGTCATGGGTCCTGGCAC	60.437	66.667	0.00	0.00	0.00	5.01
2279	5246	2.044946	GTCATGGGTCCTGGCACC	60.045	66.667	6.74	6.74	35.42	5.01
2280	5247	2.531428	TCATGGGTCCTGGCACCA	60.531	61.111	10.87	10.87	38.32	4.17
2281	5248	2.044650	CATGGGTCCTGGCACCAG	60.045	66.667	9.87	9.87	43.26	4.00
2282	5249	2.204136	ATGGGTCCTGGCACCAGA	60.204	61.111	18.44	1.68	46.30	3.86
2283	5250	1.852157	ATGGGTCCTGGCACCAGAA	60.852	57.895	18.44	0.00	46.30	3.02
2284	5251	2.034221	GGGTCCTGGCACCAGAAC	59.966	66.667	18.44	8.00	46.30	3.01
2285	5252	2.529744	GGGTCCTGGCACCAGAACT	61.530	63.158	18.44	0.00	46.30	3.01
2286	5253	1.302832	GGTCCTGGCACCAGAACTG	60.303	63.158	18.44	1.34	46.30	3.16
2298	5265	3.536956	CCAGAACTGGCGGTAGATTAA	57.463	47.619	7.95	0.00	44.73	1.40
2299	5266	3.195661	CCAGAACTGGCGGTAGATTAAC	58.804	50.000	7.95	0.00	44.73	2.01
2300	5267	2.858344	CAGAACTGGCGGTAGATTAACG	59.142	50.000	0.00	0.00	42.93	3.18
2301	5268	2.159142	AGAACTGGCGGTAGATTAACGG	60.159	50.000	0.00	0.00	39.77	4.44
2305	5272	3.654178	GCGGTAGATTAACGGCAGA	57.346	52.632	0.00	0.00	43.13	4.26
2306	5273	1.206523	GCGGTAGATTAACGGCAGAC	58.793	55.000	0.00	0.00	43.13	3.51
2321	5288	4.129737	GACGCCGTCAGCCAGCTA	62.130	66.667	13.23	0.00	38.78	3.32
2322	5289	4.436998	ACGCCGTCAGCCAGCTAC	62.437	66.667	0.00	0.00	38.78	3.58
2323	5290	4.135153	CGCCGTCAGCCAGCTACT	62.135	66.667	0.00	0.00	38.78	2.57
2324	5291	2.771639	CGCCGTCAGCCAGCTACTA	61.772	63.158	0.00	0.00	38.78	1.82
2325	5292	1.227002	GCCGTCAGCCAGCTACTAC	60.227	63.158	0.00	0.00	34.35	2.73
2326	5293	1.064296	CCGTCAGCCAGCTACTACG	59.936	63.158	12.01	12.01	0.00	3.51
2327	5294	1.374343	CCGTCAGCCAGCTACTACGA	61.374	60.000	17.70	0.00	31.77	3.43
2328	5295	0.028242	CGTCAGCCAGCTACTACGAG	59.972	60.000	13.14	0.00	31.77	4.18
2329	5296	1.096416	GTCAGCCAGCTACTACGAGT	58.904	55.000	0.00	0.00	0.00	4.18
2330	5297	1.064357	GTCAGCCAGCTACTACGAGTC	59.936	57.143	0.00	0.00	0.00	3.36
2331	5298	0.382515	CAGCCAGCTACTACGAGTCC	59.617	60.000	0.00	0.00	0.00	3.85
2332	5299	0.034380	AGCCAGCTACTACGAGTCCA	60.034	55.000	0.00	0.00	0.00	4.02
2333	5300	0.100861	GCCAGCTACTACGAGTCCAC	59.899	60.000	0.00	0.00	0.00	4.02
2334	5301	0.377554	CCAGCTACTACGAGTCCACG	59.622	60.000	0.00	0.00	39.31	4.94
2336	5303	1.085091	AGCTACTACGAGTCCACGTG	58.915	55.000	9.08	9.08	46.02	4.49
2337	5304	0.098376	GCTACTACGAGTCCACGTGG	59.902	60.000	29.26	29.26	46.02	4.94
2338	5305	0.098376	CTACTACGAGTCCACGTGGC	59.902	60.000	30.25	23.26	45.77	5.01
2339	5306	0.606130	TACTACGAGTCCACGTGGCA	60.606	55.000	30.25	15.78	45.77	4.92
2340	5307	1.248785	ACTACGAGTCCACGTGGCAT	61.249	55.000	30.25	19.97	45.77	4.40
2341	5308	0.736636	CTACGAGTCCACGTGGCATA	59.263	55.000	30.25	10.39	46.02	3.14
2342	5309	1.133598	CTACGAGTCCACGTGGCATAA	59.866	52.381	30.25	9.97	46.02	1.90
2343	5310	0.389426	ACGAGTCCACGTGGCATAAC	60.389	55.000	30.25	21.70	44.84	1.89
2351	5318	2.967740	CGTGGCATAACGGTCCTAC	58.032	57.895	0.00	0.00	39.89	3.18
2352	5319	0.529119	CGTGGCATAACGGTCCTACC	60.529	60.000	0.00	0.00	39.89	3.18
2361	5328	4.672251	GGTCCTACCGCTACAGGA	57.328	61.111	0.00	0.00	38.66	3.86
2364	5331	2.877975	TCCTACCGCTACAGGACAC	58.122	57.895	0.00	0.00	35.99	3.67
2365	5332	1.028330	TCCTACCGCTACAGGACACG	61.028	60.000	0.00	0.00	35.99	4.49
2370	5337	4.065281	GCTACAGGACACGGCGGT	62.065	66.667	13.24	6.25	0.00	5.68
2371	5338	2.703798	GCTACAGGACACGGCGGTA	61.704	63.158	13.24	1.22	0.00	4.02
2372	5339	1.432251	CTACAGGACACGGCGGTAG	59.568	63.158	13.24	8.10	0.00	3.18
2373	5340	2.001361	CTACAGGACACGGCGGTAGG	62.001	65.000	13.24	0.00	0.00	3.18
2374	5341	2.482796	TACAGGACACGGCGGTAGGA	62.483	60.000	13.24	0.00	0.00	2.94
2375	5342	3.066814	AGGACACGGCGGTAGGAC	61.067	66.667	13.24	0.00	0.00	3.85
2376	5343	3.376078	GGACACGGCGGTAGGACA	61.376	66.667	13.24	0.00	0.00	4.02
2377	5344	2.181021	GACACGGCGGTAGGACAG	59.819	66.667	13.24	0.00	0.00	3.51
2378	5345	3.984200	GACACGGCGGTAGGACAGC	62.984	68.421	13.24	0.00	38.59	4.40
2379	5346	3.760035	CACGGCGGTAGGACAGCT	61.760	66.667	13.24	0.00	39.29	4.24
2380	5347	2.995574	ACGGCGGTAGGACAGCTT	60.996	61.111	13.24	0.00	39.29	3.74
2381	5348	1.679977	ACGGCGGTAGGACAGCTTA	60.680	57.895	13.24	0.00	39.29	3.09
2382	5349	1.065928	CGGCGGTAGGACAGCTTAG	59.934	63.158	0.00	0.00	39.29	2.18
2383	5350	1.381928	CGGCGGTAGGACAGCTTAGA	61.382	60.000	0.00	0.00	39.29	2.10
2384	5351	0.102663	GGCGGTAGGACAGCTTAGAC	59.897	60.000	1.90	0.00	39.29	2.59
2385	5352	1.104630	GCGGTAGGACAGCTTAGACT	58.895	55.000	0.00	0.00	36.37	3.24
2386	5353	2.295885	GCGGTAGGACAGCTTAGACTA	58.704	52.381	0.00	0.00	36.37	2.59
2387	5354	2.033174	GCGGTAGGACAGCTTAGACTAC	59.967	54.545	6.23	6.23	36.37	2.73
2388	5355	2.617774	CGGTAGGACAGCTTAGACTACC	59.382	54.545	17.54	17.54	46.37	3.18
2389	5356	2.617774	GGTAGGACAGCTTAGACTACCG	59.382	54.545	14.39	0.00	42.77	4.02
2390	5357	1.104630	AGGACAGCTTAGACTACCGC	58.895	55.000	0.00	0.00	0.00	5.68
2391	5358	0.102663	GGACAGCTTAGACTACCGCC	59.897	60.000	0.00	0.00	0.00	6.13
2392	5359	0.815734	GACAGCTTAGACTACCGCCA	59.184	55.000	0.00	0.00	0.00	5.69
2393	5360	1.409427	GACAGCTTAGACTACCGCCAT	59.591	52.381	0.00	0.00	0.00	4.40
2394	5361	2.621998	GACAGCTTAGACTACCGCCATA	59.378	50.000	0.00	0.00	0.00	2.74
2395	5362	2.623889	ACAGCTTAGACTACCGCCATAG	59.376	50.000	0.00	0.00	0.00	2.23
2396	5363	2.623889	CAGCTTAGACTACCGCCATAGT	59.376	50.000	0.00	0.00	38.13	2.12
2401	5368	2.493713	GACTACCGCCATAGTCTGTG	57.506	55.000	12.67	0.00	45.19	3.66
2402	5369	1.067212	GACTACCGCCATAGTCTGTGG	59.933	57.143	11.19	11.19	45.19	4.17
2408	5375	3.967886	CCATAGTCTGTGGCGGTAG	57.032	57.895	2.25	0.00	0.00	3.18
2409	5376	0.389391	CCATAGTCTGTGGCGGTAGG	59.611	60.000	2.25	0.00	0.00	3.18
2410	5377	0.389391	CATAGTCTGTGGCGGTAGGG	59.611	60.000	0.00	0.00	0.00	3.53
2411	5378	0.032416	ATAGTCTGTGGCGGTAGGGT	60.032	55.000	0.00	0.00	0.00	4.34
2412	5379	0.682209	TAGTCTGTGGCGGTAGGGTC	60.682	60.000	0.00	0.00	0.00	4.46
2413	5380	3.066190	TCTGTGGCGGTAGGGTCG	61.066	66.667	0.00	0.00	0.00	4.79
2420	5387	4.728102	CGGTAGGGTCGCGCAACA	62.728	66.667	8.75	0.00	0.00	3.33
2421	5388	3.116531	GGTAGGGTCGCGCAACAC	61.117	66.667	8.75	0.00	0.00	3.32
2422	5389	2.048503	GTAGGGTCGCGCAACACT	60.049	61.111	8.95	8.95	36.66	3.55
2423	5390	2.048597	TAGGGTCGCGCAACACTG	60.049	61.111	14.92	0.00	34.00	3.66
2424	5391	3.583276	TAGGGTCGCGCAACACTGG	62.583	63.158	14.92	0.00	34.00	4.00
2432	5399	2.032071	GCAACACTGGCGGGTACT	59.968	61.111	0.00	0.00	0.00	2.73
2433	5400	2.325082	GCAACACTGGCGGGTACTG	61.325	63.158	0.00	0.00	38.10	2.74
2434	5401	1.070786	CAACACTGGCGGGTACTGT	59.929	57.895	0.00	0.00	36.83	3.55
2435	5402	1.070786	AACACTGGCGGGTACTGTG	59.929	57.895	0.00	0.00	41.66	3.66
2436	5403	1.404479	AACACTGGCGGGTACTGTGA	61.404	55.000	8.99	0.00	39.30	3.58
2437	5404	1.374252	CACTGGCGGGTACTGTGAC	60.374	63.158	0.00	0.00	39.30	3.67
2438	5405	2.126071	CTGGCGGGTACTGTGACG	60.126	66.667	0.00	0.00	36.83	4.35
2439	5406	2.598099	TGGCGGGTACTGTGACGA	60.598	61.111	0.00	0.00	36.83	4.20
2440	5407	2.181021	GGCGGGTACTGTGACGAG	59.819	66.667	0.00	0.00	36.83	4.18
2441	5408	2.181021	GCGGGTACTGTGACGAGG	59.819	66.667	0.00	0.00	36.83	4.63
2442	5409	2.633509	GCGGGTACTGTGACGAGGT	61.634	63.158	0.00	0.00	36.83	3.85
2443	5410	1.308069	GCGGGTACTGTGACGAGGTA	61.308	60.000	0.00	0.00	36.83	3.08
2444	5411	1.386533	CGGGTACTGTGACGAGGTAT	58.613	55.000	0.00	0.00	0.00	2.73
2445	5412	1.332997	CGGGTACTGTGACGAGGTATC	59.667	57.143	0.00	0.00	0.00	2.24
2446	5413	2.652590	GGGTACTGTGACGAGGTATCT	58.347	52.381	0.00	0.00	0.00	1.98
2447	5414	2.358267	GGGTACTGTGACGAGGTATCTG	59.642	54.545	0.00	0.00	0.00	2.90
2448	5415	3.015327	GGTACTGTGACGAGGTATCTGT	58.985	50.000	0.00	0.00	0.00	3.41
2449	5416	3.442977	GGTACTGTGACGAGGTATCTGTT	59.557	47.826	0.00	0.00	0.00	3.16
2450	5417	4.082354	GGTACTGTGACGAGGTATCTGTTT	60.082	45.833	0.00	0.00	0.00	2.83
2451	5418	4.602340	ACTGTGACGAGGTATCTGTTTT	57.398	40.909	0.00	0.00	0.00	2.43
2452	5419	4.557205	ACTGTGACGAGGTATCTGTTTTC	58.443	43.478	0.00	0.00	0.00	2.29
2453	5420	3.921677	TGTGACGAGGTATCTGTTTTCC	58.078	45.455	0.00	0.00	0.00	3.13
2454	5421	3.576982	TGTGACGAGGTATCTGTTTTCCT	59.423	43.478	0.00	0.00	0.00	3.36
2455	5422	4.768448	TGTGACGAGGTATCTGTTTTCCTA	59.232	41.667	0.00	0.00	0.00	2.94
2456	5423	5.105877	TGTGACGAGGTATCTGTTTTCCTAG	60.106	44.000	0.00	0.00	0.00	3.02
2457	5424	4.142227	TGACGAGGTATCTGTTTTCCTAGC	60.142	45.833	0.00	0.00	0.00	3.42
2458	5425	3.181489	ACGAGGTATCTGTTTTCCTAGCG	60.181	47.826	0.00	0.00	0.00	4.26
2459	5426	3.718815	GAGGTATCTGTTTTCCTAGCGG	58.281	50.000	0.00	0.00	0.00	5.52
2460	5427	2.158943	AGGTATCTGTTTTCCTAGCGGC	60.159	50.000	0.00	0.00	0.00	6.53
2461	5428	2.419574	GGTATCTGTTTTCCTAGCGGCA	60.420	50.000	1.45	0.00	0.00	5.69
2462	5429	2.029838	ATCTGTTTTCCTAGCGGCAG	57.970	50.000	1.45	0.00	0.00	4.85
2463	5430	0.036388	TCTGTTTTCCTAGCGGCAGG	60.036	55.000	1.45	7.43	37.00	4.85
2464	5431	1.002624	TGTTTTCCTAGCGGCAGGG	60.003	57.895	15.35	10.71	36.26	4.45
2465	5432	1.002502	GTTTTCCTAGCGGCAGGGT	60.003	57.895	15.35	0.00	36.26	4.34
2466	5433	0.251073	GTTTTCCTAGCGGCAGGGTA	59.749	55.000	15.35	3.30	36.26	3.69
2467	5434	0.251073	TTTTCCTAGCGGCAGGGTAC	59.749	55.000	15.35	0.00	36.26	3.34
2480	5447	2.580815	GGTACCACACCCTACCGC	59.419	66.667	7.15	0.00	42.07	5.68
2481	5448	2.580815	GTACCACACCCTACCGCC	59.419	66.667	0.00	0.00	0.00	6.13
2482	5449	3.069946	TACCACACCCTACCGCCG	61.070	66.667	0.00	0.00	0.00	6.46
2483	5450	3.884704	TACCACACCCTACCGCCGT	62.885	63.158	0.00	0.00	0.00	5.68
2484	5451	2.491770	TACCACACCCTACCGCCGTA	62.492	60.000	0.00	0.00	0.00	4.02
2485	5452	2.493030	CACACCCTACCGCCGTAG	59.507	66.667	5.35	5.35	41.55	3.51
2498	5465	2.410469	CGTAGGGTTCGGCGGTAG	59.590	66.667	7.21	0.00	0.00	3.18
2499	5466	2.810403	GTAGGGTTCGGCGGTAGG	59.190	66.667	7.21	0.00	0.00	3.18
2500	5467	2.442643	TAGGGTTCGGCGGTAGGG	60.443	66.667	7.21	0.00	0.00	3.53
2521	5488	3.434319	CGCGCATGGCACTCCTTT	61.434	61.111	8.75	0.00	43.84	3.11
2522	5489	2.486966	GCGCATGGCACTCCTTTC	59.513	61.111	0.30	0.00	42.87	2.62
2523	5490	2.042831	GCGCATGGCACTCCTTTCT	61.043	57.895	0.30	0.00	42.87	2.52
2524	5491	1.798735	CGCATGGCACTCCTTTCTG	59.201	57.895	0.00	0.00	0.00	3.02
2525	5492	0.957395	CGCATGGCACTCCTTTCTGT	60.957	55.000	0.00	0.00	0.00	3.41
2526	5493	0.524862	GCATGGCACTCCTTTCTGTG	59.475	55.000	0.00	0.00	37.26	3.66
2527	5494	1.883638	GCATGGCACTCCTTTCTGTGA	60.884	52.381	0.00	0.00	36.38	3.58
2528	5495	1.808945	CATGGCACTCCTTTCTGTGAC	59.191	52.381	0.00	0.00	42.20	3.67
2529	5496	0.249868	TGGCACTCCTTTCTGTGACG	60.250	55.000	0.00	0.00	44.60	4.35
2530	5497	0.033504	GGCACTCCTTTCTGTGACGA	59.966	55.000	0.00	0.00	36.38	4.20
2531	5498	1.423395	GCACTCCTTTCTGTGACGAG	58.577	55.000	0.00	0.00	36.38	4.18
2532	5499	1.937108	GCACTCCTTTCTGTGACGAGG	60.937	57.143	0.00	0.00	36.38	4.63
2533	5500	1.613925	CACTCCTTTCTGTGACGAGGA	59.386	52.381	0.00	0.00	36.38	3.71
2534	5501	2.035961	CACTCCTTTCTGTGACGAGGAA	59.964	50.000	0.00	0.00	37.81	3.36
2535	5502	2.900546	ACTCCTTTCTGTGACGAGGAAT	59.099	45.455	0.00	0.00	37.81	3.01
2536	5503	3.257393	CTCCTTTCTGTGACGAGGAATG	58.743	50.000	0.00	0.00	37.81	2.67
2537	5504	1.734465	CCTTTCTGTGACGAGGAATGC	59.266	52.381	0.00	0.00	0.00	3.56
2538	5505	1.391485	CTTTCTGTGACGAGGAATGCG	59.609	52.381	0.00	0.00	0.00	4.73
2539	5506	0.317160	TTCTGTGACGAGGAATGCGT	59.683	50.000	0.00	0.00	45.79	5.24
2540	5507	0.317160	TCTGTGACGAGGAATGCGTT	59.683	50.000	0.00	0.00	42.77	4.84
2541	5508	0.716108	CTGTGACGAGGAATGCGTTC	59.284	55.000	10.34	10.34	42.77	3.95
2562	5529	4.462280	CCGGCGGTAGGGTTCCAC	62.462	72.222	19.97	0.00	0.00	4.02
2563	5530	3.697747	CGGCGGTAGGGTTCCACA	61.698	66.667	0.00	0.00	0.00	4.17
2564	5531	2.995547	GGCGGTAGGGTTCCACAT	59.004	61.111	0.00	0.00	0.00	3.21
2565	5532	1.153229	GGCGGTAGGGTTCCACATC	60.153	63.158	0.00	0.00	0.00	3.06
2566	5533	1.153229	GCGGTAGGGTTCCACATCC	60.153	63.158	0.00	0.00	0.00	3.51
2567	5534	1.623542	GCGGTAGGGTTCCACATCCT	61.624	60.000	0.00	0.00	34.85	3.24
2568	5535	1.784358	CGGTAGGGTTCCACATCCTA	58.216	55.000	0.00	0.00	32.46	2.94
2571	5538	1.411612	GTAGGGTTCCACATCCTACCG	59.588	57.143	7.35	0.00	44.29	4.02
2572	5539	1.153229	GGGTTCCACATCCTACCGC	60.153	63.158	0.00	0.00	0.00	5.68
2573	5540	1.153229	GGTTCCACATCCTACCGCC	60.153	63.158	0.00	0.00	0.00	6.13
2574	5541	1.600107	GTTCCACATCCTACCGCCA	59.400	57.895	0.00	0.00	0.00	5.69
2575	5542	0.035820	GTTCCACATCCTACCGCCAA	60.036	55.000	0.00	0.00	0.00	4.52
2576	5543	0.251916	TTCCACATCCTACCGCCAAG	59.748	55.000	0.00	0.00	0.00	3.61
2577	5544	1.819632	CCACATCCTACCGCCAAGC	60.820	63.158	0.00	0.00	0.00	4.01
2578	5545	1.819632	CACATCCTACCGCCAAGCC	60.820	63.158	0.00	0.00	0.00	4.35
2579	5546	2.203209	CATCCTACCGCCAAGCCC	60.203	66.667	0.00	0.00	0.00	5.19
2580	5547	3.861797	ATCCTACCGCCAAGCCCG	61.862	66.667	0.00	0.00	0.00	6.13
2582	5549	3.463585	CCTACCGCCAAGCCCGTA	61.464	66.667	0.00	0.00	0.00	4.02
2583	5550	2.803817	CCTACCGCCAAGCCCGTAT	61.804	63.158	0.00	0.00	0.00	3.06
2584	5551	1.466025	CCTACCGCCAAGCCCGTATA	61.466	60.000	0.00	0.00	0.00	1.47
2585	5552	0.390124	CTACCGCCAAGCCCGTATAA	59.610	55.000	0.00	0.00	0.00	0.98
2586	5553	0.104671	TACCGCCAAGCCCGTATAAC	59.895	55.000	0.00	0.00	0.00	1.89
2587	5554	1.145377	CCGCCAAGCCCGTATAACT	59.855	57.895	0.00	0.00	0.00	2.24
2588	5555	1.157870	CCGCCAAGCCCGTATAACTG	61.158	60.000	0.00	0.00	0.00	3.16
2589	5556	1.772063	CGCCAAGCCCGTATAACTGC	61.772	60.000	0.00	0.00	0.00	4.40
2590	5557	0.463833	GCCAAGCCCGTATAACTGCT	60.464	55.000	0.00	0.00	35.08	4.24
2591	5558	1.583054	CCAAGCCCGTATAACTGCTC	58.417	55.000	0.00	0.00	32.62	4.26
2592	5559	1.209128	CAAGCCCGTATAACTGCTCG	58.791	55.000	0.00	0.00	32.62	5.03
2593	5560	0.529992	AAGCCCGTATAACTGCTCGC	60.530	55.000	0.00	0.00	32.62	5.03
2594	5561	1.227147	GCCCGTATAACTGCTCGCA	60.227	57.895	0.00	0.00	0.00	5.10
2595	5562	1.488261	GCCCGTATAACTGCTCGCAC	61.488	60.000	0.00	0.00	0.00	5.34
2596	5563	0.874607	CCCGTATAACTGCTCGCACC	60.875	60.000	0.00	0.00	0.00	5.01
2597	5564	0.874607	CCGTATAACTGCTCGCACCC	60.875	60.000	0.00	0.00	0.00	4.61
2598	5565	0.102481	CGTATAACTGCTCGCACCCT	59.898	55.000	0.00	0.00	0.00	4.34
2599	5566	1.335810	CGTATAACTGCTCGCACCCTA	59.664	52.381	0.00	0.00	0.00	3.53
2600	5567	2.740452	GTATAACTGCTCGCACCCTAC	58.260	52.381	0.00	0.00	0.00	3.18
2601	5568	0.464452	ATAACTGCTCGCACCCTACC	59.536	55.000	0.00	0.00	0.00	3.18
2602	5569	1.940883	TAACTGCTCGCACCCTACCG	61.941	60.000	0.00	0.00	0.00	4.02
2606	5573	4.514577	CTCGCACCCTACCGCCAG	62.515	72.222	0.00	0.00	0.00	4.85
2622	5589	2.683933	AGGGACTGTGGCGGTAGG	60.684	66.667	0.00	0.00	37.18	3.18
2623	5590	3.782443	GGGACTGTGGCGGTAGGG	61.782	72.222	0.00	0.00	0.00	3.53
2624	5591	2.682494	GGACTGTGGCGGTAGGGA	60.682	66.667	0.00	0.00	0.00	4.20
2625	5592	2.722201	GGACTGTGGCGGTAGGGAG	61.722	68.421	0.00	0.00	0.00	4.30
2626	5593	2.683933	ACTGTGGCGGTAGGGAGG	60.684	66.667	0.00	0.00	0.00	4.30
2627	5594	4.162690	CTGTGGCGGTAGGGAGGC	62.163	72.222	0.00	0.00	0.00	4.70
2650	5617	4.913126	CCGTCTAGGGCTGTTGAC	57.087	61.111	0.00	0.00	35.97	3.18
2651	5618	4.478195	CGTCTAGGGCTGTTGACG	57.522	61.111	9.08	9.08	44.41	4.35
2652	5619	1.585006	CGTCTAGGGCTGTTGACGT	59.415	57.895	13.10	0.00	44.65	4.34
2653	5620	0.732880	CGTCTAGGGCTGTTGACGTG	60.733	60.000	0.00	0.00	44.65	4.49
2654	5621	0.389948	GTCTAGGGCTGTTGACGTGG	60.390	60.000	0.00	0.00	0.00	4.94
2655	5622	0.541063	TCTAGGGCTGTTGACGTGGA	60.541	55.000	0.00	0.00	0.00	4.02
2656	5623	0.537188	CTAGGGCTGTTGACGTGGAT	59.463	55.000	0.00	0.00	0.00	3.41
2657	5624	0.981183	TAGGGCTGTTGACGTGGATT	59.019	50.000	0.00	0.00	0.00	3.01
2658	5625	0.981183	AGGGCTGTTGACGTGGATTA	59.019	50.000	0.00	0.00	0.00	1.75
2659	5626	1.066143	AGGGCTGTTGACGTGGATTAG	60.066	52.381	0.00	0.00	0.00	1.73
2660	5627	0.727398	GGCTGTTGACGTGGATTAGC	59.273	55.000	0.00	0.00	0.00	3.09
2661	5628	1.438651	GCTGTTGACGTGGATTAGCA	58.561	50.000	0.00	0.00	0.00	3.49
2662	5629	1.128692	GCTGTTGACGTGGATTAGCAC	59.871	52.381	0.00	0.00	0.00	4.40
2663	5630	1.732259	CTGTTGACGTGGATTAGCACC	59.268	52.381	0.00	0.00	0.00	5.01
2664	5631	1.346395	TGTTGACGTGGATTAGCACCT	59.654	47.619	0.00	0.00	0.00	4.00
2665	5632	2.224426	TGTTGACGTGGATTAGCACCTT	60.224	45.455	0.00	0.00	0.00	3.50
2666	5633	3.007074	TGTTGACGTGGATTAGCACCTTA	59.993	43.478	0.00	0.00	0.00	2.69
2667	5634	3.241067	TGACGTGGATTAGCACCTTAC	57.759	47.619	0.00	0.00	0.00	2.34
2668	5635	2.829720	TGACGTGGATTAGCACCTTACT	59.170	45.455	0.00	0.00	0.00	2.24
2669	5636	3.187700	GACGTGGATTAGCACCTTACTG	58.812	50.000	0.00	0.00	0.00	2.74
2670	5637	2.829720	ACGTGGATTAGCACCTTACTGA	59.170	45.455	0.00	0.00	0.00	3.41
2671	5638	3.187700	CGTGGATTAGCACCTTACTGAC	58.812	50.000	0.00	0.00	0.00	3.51
2672	5639	3.368013	CGTGGATTAGCACCTTACTGACA	60.368	47.826	0.00	0.00	0.00	3.58
2673	5640	4.184629	GTGGATTAGCACCTTACTGACAG	58.815	47.826	0.00	0.00	0.00	3.51
2674	5641	3.197766	TGGATTAGCACCTTACTGACAGG	59.802	47.826	7.51	0.00	37.45	4.00
2675	5642	3.432326	GGATTAGCACCTTACTGACAGGG	60.432	52.174	7.51	0.87	35.46	4.45
2676	5643	2.320681	TAGCACCTTACTGACAGGGT	57.679	50.000	7.51	1.56	35.46	4.34
2678	5645	3.233355	CACCTTACTGACAGGGTGC	57.767	57.895	14.15	0.00	41.87	5.01
2679	5646	0.687354	CACCTTACTGACAGGGTGCT	59.313	55.000	14.15	0.00	41.87	4.40
2680	5647	1.072331	CACCTTACTGACAGGGTGCTT	59.928	52.381	14.15	0.00	41.87	3.91
2681	5648	1.072331	ACCTTACTGACAGGGTGCTTG	59.928	52.381	7.51	0.00	35.46	4.01
2682	5649	1.611673	CCTTACTGACAGGGTGCTTGG	60.612	57.143	7.51	0.00	0.00	3.61
2683	5650	0.250727	TTACTGACAGGGTGCTTGGC	60.251	55.000	7.51	0.00	0.00	4.52
2684	5651	2.449031	TACTGACAGGGTGCTTGGCG	62.449	60.000	7.51	0.00	0.00	5.69
2685	5652	4.641645	TGACAGGGTGCTTGGCGG	62.642	66.667	0.00	0.00	0.00	6.13
2686	5653	4.643387	GACAGGGTGCTTGGCGGT	62.643	66.667	0.00	0.00	0.00	5.68
2687	5654	3.246112	ACAGGGTGCTTGGCGGTA	61.246	61.111	0.00	0.00	0.00	4.02
2688	5655	2.436646	CAGGGTGCTTGGCGGTAG	60.437	66.667	0.00	0.00	0.00	3.18
2689	5656	3.717294	AGGGTGCTTGGCGGTAGG	61.717	66.667	0.00	0.00	0.00	3.18
2691	5658	4.410400	GGTGCTTGGCGGTAGGCT	62.410	66.667	0.00	0.00	44.18	4.58
2692	5659	3.127533	GTGCTTGGCGGTAGGCTG	61.128	66.667	0.00	0.00	44.18	4.85
2693	5660	3.636231	TGCTTGGCGGTAGGCTGT	61.636	61.111	0.00	0.00	44.18	4.40
2694	5661	2.359975	GCTTGGCGGTAGGCTGTT	60.360	61.111	0.00	0.00	44.18	3.16
2695	5662	2.399356	GCTTGGCGGTAGGCTGTTC	61.399	63.158	0.00	0.00	44.18	3.18
2696	5663	1.003839	CTTGGCGGTAGGCTGTTCA	60.004	57.895	0.00	0.00	44.18	3.18
2697	5664	1.003839	TTGGCGGTAGGCTGTTCAG	60.004	57.895	0.00	0.00	44.18	3.02
2698	5665	2.125106	GGCGGTAGGCTGTTCAGG	60.125	66.667	0.00	0.00	42.94	3.86
2699	5666	2.125106	GCGGTAGGCTGTTCAGGG	60.125	66.667	0.00	0.00	39.11	4.45
2700	5667	2.955881	GCGGTAGGCTGTTCAGGGT	61.956	63.158	0.00	0.00	39.11	4.34
2701	5668	1.677552	CGGTAGGCTGTTCAGGGTT	59.322	57.895	0.00	0.00	0.00	4.11
2702	5669	0.899720	CGGTAGGCTGTTCAGGGTTA	59.100	55.000	0.00	0.00	0.00	2.85
2703	5670	1.405121	CGGTAGGCTGTTCAGGGTTAC	60.405	57.143	0.00	0.00	0.00	2.50
2704	5671	1.065636	GGTAGGCTGTTCAGGGTTACC	60.066	57.143	0.00	0.00	0.00	2.85
2705	5672	0.899720	TAGGCTGTTCAGGGTTACCG	59.100	55.000	0.00	0.00	43.47	4.02
2706	5673	2.038837	GGCTGTTCAGGGTTACCGC	61.039	63.158	0.00	0.00	43.47	5.68
2707	5674	2.038837	GCTGTTCAGGGTTACCGCC	61.039	63.158	0.00	0.00	43.47	6.13
2708	5675	1.740296	CTGTTCAGGGTTACCGCCG	60.740	63.158	0.00	0.00	43.47	6.46
2709	5676	2.344872	GTTCAGGGTTACCGCCGT	59.655	61.111	0.00	0.00	43.47	5.68
2710	5677	1.301953	GTTCAGGGTTACCGCCGTT	60.302	57.895	0.00	0.00	43.47	4.44
2711	5678	1.301874	TTCAGGGTTACCGCCGTTG	60.302	57.895	0.00	0.00	43.47	4.10
2712	5679	3.428282	CAGGGTTACCGCCGTTGC	61.428	66.667	0.00	0.00	43.47	4.17
2713	5680	4.710167	AGGGTTACCGCCGTTGCC	62.710	66.667	0.00	0.00	43.47	4.52
2716	5683	4.710167	GTTACCGCCGTTGCCCCT	62.710	66.667	0.00	0.00	0.00	4.79
2717	5684	4.708386	TTACCGCCGTTGCCCCTG	62.708	66.667	0.00	0.00	0.00	4.45
2728	5695	2.353573	GCCCCTGGCGGTAAGAAA	59.646	61.111	0.00	0.00	39.62	2.52
2729	5696	1.303806	GCCCCTGGCGGTAAGAAAA	60.304	57.895	0.00	0.00	39.62	2.29
2730	5697	1.313091	GCCCCTGGCGGTAAGAAAAG	61.313	60.000	0.00	0.00	39.62	2.27
2731	5698	0.679960	CCCCTGGCGGTAAGAAAAGG	60.680	60.000	0.00	0.00	0.00	3.11
2732	5699	0.679960	CCCTGGCGGTAAGAAAAGGG	60.680	60.000	0.00	0.00	38.56	3.95
2733	5700	0.679960	CCTGGCGGTAAGAAAAGGGG	60.680	60.000	0.00	0.00	0.00	4.79
2734	5701	1.303806	TGGCGGTAAGAAAAGGGGC	60.304	57.895	0.00	0.00	0.00	5.80
2735	5702	2.050350	GGCGGTAAGAAAAGGGGCC	61.050	63.158	0.00	0.00	0.00	5.80
2736	5703	1.303806	GCGGTAAGAAAAGGGGCCA	60.304	57.895	4.39	0.00	0.00	5.36
2737	5704	1.313091	GCGGTAAGAAAAGGGGCCAG	61.313	60.000	4.39	0.00	0.00	4.85
2738	5705	0.326927	CGGTAAGAAAAGGGGCCAGA	59.673	55.000	4.39	0.00	0.00	3.86
2739	5706	1.064685	CGGTAAGAAAAGGGGCCAGAT	60.065	52.381	4.39	0.00	0.00	2.90
2740	5707	2.656002	GGTAAGAAAAGGGGCCAGATC	58.344	52.381	4.39	0.00	0.00	2.75
2741	5708	2.242452	GGTAAGAAAAGGGGCCAGATCT	59.758	50.000	4.39	0.00	0.00	2.75
2742	5709	2.816777	AAGAAAAGGGGCCAGATCTC	57.183	50.000	4.39	0.00	0.00	2.75
2743	5710	1.673767	AGAAAAGGGGCCAGATCTCA	58.326	50.000	4.39	0.00	0.00	3.27
2744	5711	1.995542	AGAAAAGGGGCCAGATCTCAA	59.004	47.619	4.39	0.00	0.00	3.02
2745	5712	2.379907	AGAAAAGGGGCCAGATCTCAAA	59.620	45.455	4.39	0.00	0.00	2.69
2746	5713	2.999185	AAAGGGGCCAGATCTCAAAA	57.001	45.000	4.39	0.00	0.00	2.44
2747	5714	2.999185	AAGGGGCCAGATCTCAAAAA	57.001	45.000	4.39	0.00	0.00	1.94
2779	5746	6.334202	ACGTAGAGTCAGATCTCAATTTTCC	58.666	40.000	0.00	0.00	36.97	3.13
2780	5747	6.153680	ACGTAGAGTCAGATCTCAATTTTCCT	59.846	38.462	0.00	0.00	36.97	3.36
2781	5748	7.038659	CGTAGAGTCAGATCTCAATTTTCCTT	58.961	38.462	0.00	0.00	36.97	3.36
2782	5749	7.009999	CGTAGAGTCAGATCTCAATTTTCCTTG	59.990	40.741	0.00	0.00	36.97	3.61
2783	5750	7.013823	AGAGTCAGATCTCAATTTTCCTTGA	57.986	36.000	0.00	0.00	36.97	3.02
2784	5751	7.631933	AGAGTCAGATCTCAATTTTCCTTGAT	58.368	34.615	0.00	0.00	34.76	2.57
2785	5752	8.766476	AGAGTCAGATCTCAATTTTCCTTGATA	58.234	33.333	0.00	0.00	34.76	2.15
2786	5753	9.388506	GAGTCAGATCTCAATTTTCCTTGATAA	57.611	33.333	0.00	0.00	34.76	1.75
2787	5754	9.745018	AGTCAGATCTCAATTTTCCTTGATAAA	57.255	29.630	0.00	0.00	34.76	1.40
2790	5757	9.798994	CAGATCTCAATTTTCCTTGATAAAAGG	57.201	33.333	0.00	0.00	34.76	3.11
2791	5758	8.975295	AGATCTCAATTTTCCTTGATAAAAGGG	58.025	33.333	4.36	0.00	37.99	3.95
2792	5759	8.670521	ATCTCAATTTTCCTTGATAAAAGGGT	57.329	30.769	4.36	0.00	37.99	4.34
2793	5760	8.122472	TCTCAATTTTCCTTGATAAAAGGGTC	57.878	34.615	4.36	0.00	37.99	4.46
2794	5761	7.728083	TCTCAATTTTCCTTGATAAAAGGGTCA	59.272	33.333	4.36	0.00	37.99	4.02
2795	5762	8.256356	TCAATTTTCCTTGATAAAAGGGTCAA	57.744	30.769	4.36	0.00	37.99	3.18
2796	5763	8.709308	TCAATTTTCCTTGATAAAAGGGTCAAA	58.291	29.630	4.36	2.90	37.99	2.69
2797	5764	9.336171	CAATTTTCCTTGATAAAAGGGTCAAAA	57.664	29.630	4.36	4.91	37.99	2.44
2798	5765	8.902540	ATTTTCCTTGATAAAAGGGTCAAAAC	57.097	30.769	4.36	0.00	37.99	2.43
2799	5766	7.425224	TTTCCTTGATAAAAGGGTCAAAACA	57.575	32.000	4.36	0.00	37.99	2.83
2800	5767	6.399639	TCCTTGATAAAAGGGTCAAAACAC	57.600	37.500	4.36	0.00	37.99	3.32
2801	5768	5.009210	TCCTTGATAAAAGGGTCAAAACACG	59.991	40.000	4.36	0.00	37.99	4.49
2802	5769	5.009210	CCTTGATAAAAGGGTCAAAACACGA	59.991	40.000	0.00	0.00	34.26	4.35
2803	5770	6.452494	TTGATAAAAGGGTCAAAACACGAA	57.548	33.333	0.00	0.00	32.44	3.85
2804	5771	6.452494	TGATAAAAGGGTCAAAACACGAAA	57.548	33.333	0.00	0.00	32.44	3.46
2805	5772	7.045126	TGATAAAAGGGTCAAAACACGAAAT	57.955	32.000	0.00	0.00	32.44	2.17
2806	5773	7.493367	TGATAAAAGGGTCAAAACACGAAATT	58.507	30.769	0.00	0.00	32.44	1.82
2807	5774	7.982354	TGATAAAAGGGTCAAAACACGAAATTT	59.018	29.630	0.00	0.00	32.44	1.82
2808	5775	8.725405	ATAAAAGGGTCAAAACACGAAATTTT	57.275	26.923	0.00	0.00	32.44	1.82
2809	5776	6.415798	AAAGGGTCAAAACACGAAATTTTG	57.584	33.333	3.73	3.73	44.74	2.44
2810	5777	3.868661	AGGGTCAAAACACGAAATTTTGC	59.131	39.130	5.27	11.02	43.62	3.68
2811	5778	3.001838	GGGTCAAAACACGAAATTTTGCC	59.998	43.478	5.27	16.17	43.62	4.52
2812	5779	3.001838	GGTCAAAACACGAAATTTTGCCC	59.998	43.478	5.27	11.08	43.62	5.36
2813	5780	3.619038	GTCAAAACACGAAATTTTGCCCA	59.381	39.130	5.27	1.40	43.62	5.36
2876	5848	4.084537	CGATCACACTTTGCCGTATATTCC	60.085	45.833	0.00	0.00	0.00	3.01
2890	5862	1.568504	TATTCCCTGCCTCGTGAGTT	58.431	50.000	0.00	0.00	0.00	3.01
3023	5996	2.223294	CGTGCCTGAAAACCAAAACGTA	60.223	45.455	0.00	0.00	0.00	3.57
3153	6126	9.450807	CAAAACCAAAACATCTAAAGTGACTAG	57.549	33.333	0.00	0.00	0.00	2.57
3596	6571	2.236146	AGAGCACCACATCGATTTACCA	59.764	45.455	0.00	0.00	0.00	3.25
3603	6578	4.080582	ACCACATCGATTTACCATGAGGAA	60.081	41.667	0.00	0.00	38.69	3.36
3670	6655	1.717077	ACTTCCTCAGAGGTGACCCTA	59.283	52.381	16.65	0.00	42.86	3.53
3676	6661	3.025262	CTCAGAGGTGACCCTAGGTTAC	58.975	54.545	8.29	3.45	42.86	2.50
3734	6719	6.490040	TGGTCTCTAGCAAGCTTTTGTTAAAT	59.510	34.615	0.00	0.00	0.00	1.40
3743	6728	9.709495	AGCAAGCTTTTGTTAAATGATCAATTA	57.291	25.926	0.00	0.00	0.00	1.40
3766	6753	4.651778	TCTTTTGACCGGATCAATCAAGT	58.348	39.130	9.46	0.00	46.80	3.16
3889	7062	1.471676	GCACTAGAAGTCACCCATCGG	60.472	57.143	0.00	0.00	0.00	4.18
3960	7133	3.181367	GGCACGAGTCCTGCATTG	58.819	61.111	14.80	0.00	36.27	2.82
3977	7150	4.130118	GCATTGAGAATCGGTTGTCCTAT	58.870	43.478	2.74	0.00	38.61	2.57
3979	7152	5.605534	CATTGAGAATCGGTTGTCCTATCT	58.394	41.667	2.74	0.00	38.61	1.98
3989	7162	3.243724	GTTGTCCTATCTCAGGCCCTAT	58.756	50.000	0.00	0.00	45.10	2.57
4014	7187	6.600388	TGCAGGCTTAAATGGATGTATCTAA	58.400	36.000	0.00	0.00	0.00	2.10
4341	7514	5.106317	CGGTTGTATTGTAGGCTTGTTCATT	60.106	40.000	0.00	0.00	0.00	2.57
4468	7641	1.445582	GGACTACGTGGCGACCTTG	60.446	63.158	0.00	0.00	0.00	3.61
4537	7710	7.201617	GGTTATAGGCTCACAACTGATGTTAAC	60.202	40.741	0.00	0.00	41.46	2.01
4540	7713	4.456911	AGGCTCACAACTGATGTTAACATG	59.543	41.667	25.42	14.42	41.46	3.21
4553	7728	8.099364	TGATGTTAACATGGTTTTCTTCTCTC	57.901	34.615	25.42	7.39	36.57	3.20
4558	7733	9.803315	GTTAACATGGTTTTCTTCTCTCTTTTT	57.197	29.630	0.00	0.00	0.00	1.94
4640	7815	1.406614	GCTGCACTGCCTCAGTCTATT	60.407	52.381	0.00	0.00	43.43	1.73
4658	7833	7.067372	CAGTCTATTGGGACATTTATCTTTGCA	59.933	37.037	0.00	0.00	39.30	4.08
4694	7869	5.512060	CCTGCATGCCAATATACTCAGTACT	60.512	44.000	16.68	0.00	0.00	2.73
4696	7871	5.163311	TGCATGCCAATATACTCAGTACTGT	60.163	40.000	21.99	6.99	0.00	3.55
4737	7912	2.222678	CGCATGTCATGGTGATTAGAGC	59.777	50.000	14.64	0.00	0.00	4.09
4783	7958	2.162681	GACCACATTGTTCTTCCCTGG	58.837	52.381	0.00	0.00	0.00	4.45
4784	7959	1.203050	ACCACATTGTTCTTCCCTGGG	60.203	52.381	6.33	6.33	0.00	4.45
4790	7965	1.072505	GTTCTTCCCTGGGCACGAA	59.927	57.895	8.22	7.43	0.00	3.85
4892	8067	9.448438	CTGCCTATTTTAGCCACATATTATGTA	57.552	33.333	8.95	0.00	42.70	2.29
5025	8204	0.321830	AATTGCATGTGCTTTGGCCC	60.322	50.000	0.00	0.00	42.66	5.80
5389	8574	5.505173	AACACTTTCAGTCAATTGAGGTG	57.495	39.130	8.80	9.75	37.97	4.00
5483	8671	7.607607	AGCCTATAAAACATATCAATCATGCGA	59.392	33.333	0.00	0.00	0.00	5.10
5504	8694	0.251341	CCCTCCCACCACCTGAAAAG	60.251	60.000	0.00	0.00	0.00	2.27
5511	8702	2.487986	CCACCACCTGAAAAGAGAAGCT	60.488	50.000	0.00	0.00	0.00	3.74
5524	8715	2.093075	AGAGAAGCTCCACCATGTGATG	60.093	50.000	0.00	0.00	35.23	3.07
5535	8726	1.745087	CCATGTGATGTTGTAGCACCC	59.255	52.381	0.00	0.00	44.94	4.61
5540	8731	4.198530	TGTGATGTTGTAGCACCCATATG	58.801	43.478	0.00	0.00	44.94	1.78
5787	8990	4.438148	TCGGAGCAAAAATATCGACATCA	58.562	39.130	0.00	0.00	0.00	3.07

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
481	617	2.022129	CACGGACGTGTCAGCTTCC	61.022	63.158	16.06	0.00	40.91	3.46
927	3722	3.694535	ACGTAGCGAGGAAGTAATCAG	57.305	47.619	0.00	0.00	0.00	2.90
934	3729	0.806868	TGGTGTACGTAGCGAGGAAG	59.193	55.000	0.00	0.00	0.00	3.46
988	3788	1.665916	CTATCATCGCGGCCACCAG	60.666	63.158	6.13	0.00	0.00	4.00
1149	3949	1.889530	CGAAGGCGAAGAAGGGGAGT	61.890	60.000	0.00	0.00	40.82	3.85
1352	4181	0.818296	GATGCACCACGAGTAGGAGT	59.182	55.000	0.00	0.00	0.00	3.85
1780	4624	0.642291	CACTAATCTGCTGTGTCGCG	59.358	55.000	0.00	0.00	0.00	5.87
2191	5158	3.926616	TCGATTTTCTCTGACAAGGGTC	58.073	45.455	0.00	0.00	44.57	4.46
2192	5159	3.578716	TCTCGATTTTCTCTGACAAGGGT	59.421	43.478	0.00	0.00	0.00	4.34
2193	5160	4.193826	TCTCGATTTTCTCTGACAAGGG	57.806	45.455	0.00	0.00	0.00	3.95
2194	5161	5.519566	CAGATCTCGATTTTCTCTGACAAGG	59.480	44.000	0.00	0.00	36.32	3.61
2195	5162	6.328714	TCAGATCTCGATTTTCTCTGACAAG	58.671	40.000	0.00	0.00	37.89	3.16
2196	5163	6.272822	TCAGATCTCGATTTTCTCTGACAA	57.727	37.500	0.00	0.00	37.89	3.18
2197	5164	5.904362	TCAGATCTCGATTTTCTCTGACA	57.096	39.130	0.00	0.00	37.89	3.58
2199	5166	4.098654	GGGTCAGATCTCGATTTTCTCTGA	59.901	45.833	0.00	7.86	39.87	3.27
2200	5167	4.099266	AGGGTCAGATCTCGATTTTCTCTG	59.901	45.833	0.00	0.00	35.71	3.35
2201	5168	4.285863	AGGGTCAGATCTCGATTTTCTCT	58.714	43.478	0.00	0.00	0.00	3.10
2202	5169	4.664150	AGGGTCAGATCTCGATTTTCTC	57.336	45.455	0.00	0.00	0.00	2.87
2203	5170	5.205056	AGTAGGGTCAGATCTCGATTTTCT	58.795	41.667	0.00	0.00	0.00	2.52
2204	5171	5.523438	AGTAGGGTCAGATCTCGATTTTC	57.477	43.478	0.00	0.00	0.00	2.29
2205	5172	5.422331	TGAAGTAGGGTCAGATCTCGATTTT	59.578	40.000	0.00	0.00	0.00	1.82
2206	5173	4.956700	TGAAGTAGGGTCAGATCTCGATTT	59.043	41.667	0.00	0.00	0.00	2.17
2207	5174	4.537751	TGAAGTAGGGTCAGATCTCGATT	58.462	43.478	0.00	0.00	0.00	3.34
2208	5175	4.171878	TGAAGTAGGGTCAGATCTCGAT	57.828	45.455	0.00	0.00	0.00	3.59
2209	5176	3.646736	TGAAGTAGGGTCAGATCTCGA	57.353	47.619	0.00	0.00	0.00	4.04
2210	5177	4.720649	TTTGAAGTAGGGTCAGATCTCG	57.279	45.455	0.00	0.00	0.00	4.04
2211	5178	6.410540	ACAATTTGAAGTAGGGTCAGATCTC	58.589	40.000	2.79	0.00	0.00	2.75
2212	5179	6.380079	ACAATTTGAAGTAGGGTCAGATCT	57.620	37.500	2.79	0.00	0.00	2.75
2213	5180	7.454260	AAACAATTTGAAGTAGGGTCAGATC	57.546	36.000	2.79	0.00	0.00	2.75
2214	5181	7.839680	AAAACAATTTGAAGTAGGGTCAGAT	57.160	32.000	2.79	0.00	0.00	2.90
2215	5182	7.340743	TCAAAAACAATTTGAAGTAGGGTCAGA	59.659	33.333	2.79	0.00	35.69	3.27
2216	5183	7.488322	TCAAAAACAATTTGAAGTAGGGTCAG	58.512	34.615	2.79	0.00	35.69	3.51
2217	5184	7.411486	TCAAAAACAATTTGAAGTAGGGTCA	57.589	32.000	2.79	0.00	35.69	4.02
2218	5185	8.710835	TTTCAAAAACAATTTGAAGTAGGGTC	57.289	30.769	13.94	0.00	45.55	4.46
2219	5186	9.325198	GATTTCAAAAACAATTTGAAGTAGGGT	57.675	29.630	13.94	2.03	45.55	4.34
2220	5187	9.546428	AGATTTCAAAAACAATTTGAAGTAGGG	57.454	29.630	13.94	0.00	45.55	3.53
2224	5191	8.882736	GGTCAGATTTCAAAAACAATTTGAAGT	58.117	29.630	13.94	12.12	45.55	3.01
2225	5192	8.337532	GGGTCAGATTTCAAAAACAATTTGAAG	58.662	33.333	13.94	5.71	45.55	3.02
2226	5193	8.046107	AGGGTCAGATTTCAAAAACAATTTGAA	58.954	29.630	11.21	11.21	43.99	2.69
2227	5194	7.563906	AGGGTCAGATTTCAAAAACAATTTGA	58.436	30.769	2.79	0.00	36.71	2.69
2228	5195	7.790823	AGGGTCAGATTTCAAAAACAATTTG	57.209	32.000	0.00	0.00	0.00	2.32
2229	5196	8.806429	AAAGGGTCAGATTTCAAAAACAATTT	57.194	26.923	0.00	0.00	0.00	1.82
2230	5197	8.676401	CAAAAGGGTCAGATTTCAAAAACAATT	58.324	29.630	0.00	0.00	0.00	2.32
2231	5198	7.201723	GCAAAAGGGTCAGATTTCAAAAACAAT	60.202	33.333	0.00	0.00	0.00	2.71
2232	5199	6.093357	GCAAAAGGGTCAGATTTCAAAAACAA	59.907	34.615	0.00	0.00	0.00	2.83
2233	5200	5.584251	GCAAAAGGGTCAGATTTCAAAAACA	59.416	36.000	0.00	0.00	0.00	2.83
2234	5201	5.817296	AGCAAAAGGGTCAGATTTCAAAAAC	59.183	36.000	0.00	0.00	0.00	2.43
2235	5202	5.988287	AGCAAAAGGGTCAGATTTCAAAAA	58.012	33.333	0.00	0.00	0.00	1.94
2236	5203	5.612725	AGCAAAAGGGTCAGATTTCAAAA	57.387	34.783	0.00	0.00	0.00	2.44
2237	5204	5.010617	GGTAGCAAAAGGGTCAGATTTCAAA	59.989	40.000	0.00	0.00	0.00	2.69
2238	5205	4.522789	GGTAGCAAAAGGGTCAGATTTCAA	59.477	41.667	0.00	0.00	0.00	2.69
2239	5206	4.079253	GGTAGCAAAAGGGTCAGATTTCA	58.921	43.478	0.00	0.00	0.00	2.69
2240	5207	3.127030	CGGTAGCAAAAGGGTCAGATTTC	59.873	47.826	0.00	0.00	0.00	2.17
2241	5208	3.081804	CGGTAGCAAAAGGGTCAGATTT	58.918	45.455	0.00	0.00	0.00	2.17
2242	5209	2.039879	ACGGTAGCAAAAGGGTCAGATT	59.960	45.455	0.00	0.00	0.00	2.40
2243	5210	1.628846	ACGGTAGCAAAAGGGTCAGAT	59.371	47.619	0.00	0.00	0.00	2.90
2244	5211	1.001633	GACGGTAGCAAAAGGGTCAGA	59.998	52.381	0.00	0.00	0.00	3.27
2245	5212	1.270625	TGACGGTAGCAAAAGGGTCAG	60.271	52.381	0.00	0.00	31.45	3.51
2246	5213	0.759959	TGACGGTAGCAAAAGGGTCA	59.240	50.000	0.00	0.00	32.51	4.02
2247	5214	1.737793	CATGACGGTAGCAAAAGGGTC	59.262	52.381	0.00	0.00	0.00	4.46
2248	5215	1.613255	CCATGACGGTAGCAAAAGGGT	60.613	52.381	0.00	0.00	0.00	4.34
2249	5216	1.094785	CCATGACGGTAGCAAAAGGG	58.905	55.000	0.00	0.00	0.00	3.95
2250	5217	1.094785	CCCATGACGGTAGCAAAAGG	58.905	55.000	0.00	0.00	0.00	3.11
2251	5218	1.737793	GACCCATGACGGTAGCAAAAG	59.262	52.381	0.00	0.00	35.79	2.27
2252	5219	1.612199	GGACCCATGACGGTAGCAAAA	60.612	52.381	0.00	0.00	35.79	2.44
2253	5220	0.035820	GGACCCATGACGGTAGCAAA	60.036	55.000	0.00	0.00	35.79	3.68
2254	5221	0.907704	AGGACCCATGACGGTAGCAA	60.908	55.000	0.00	0.00	35.79	3.91
2255	5222	1.305802	AGGACCCATGACGGTAGCA	60.306	57.895	0.00	0.00	35.79	3.49
2256	5223	1.144057	CAGGACCCATGACGGTAGC	59.856	63.158	0.00	0.00	35.79	3.58
2257	5224	1.823295	CCAGGACCCATGACGGTAG	59.177	63.158	0.00	0.00	35.79	3.18
2258	5225	2.363975	GCCAGGACCCATGACGGTA	61.364	63.158	0.00	0.00	35.79	4.02
2259	5226	3.717294	GCCAGGACCCATGACGGT	61.717	66.667	0.00	0.00	39.49	4.83
2260	5227	3.716195	TGCCAGGACCCATGACGG	61.716	66.667	0.00	0.00	0.00	4.79
2261	5228	2.436646	GTGCCAGGACCCATGACG	60.437	66.667	0.00	0.00	0.00	4.35
2262	5229	2.044946	GGTGCCAGGACCCATGAC	60.045	66.667	0.00	0.00	0.00	3.06
2263	5230	2.531428	TGGTGCCAGGACCCATGA	60.531	61.111	5.83	0.00	34.79	3.07
2264	5231	2.044650	CTGGTGCCAGGACCCATG	60.045	66.667	10.28	0.00	40.17	3.66
2265	5232	1.852157	TTCTGGTGCCAGGACCCAT	60.852	57.895	17.23	0.00	43.75	4.00
2266	5233	2.449518	TTCTGGTGCCAGGACCCA	60.450	61.111	17.23	2.09	43.75	4.51
2267	5234	2.034221	GTTCTGGTGCCAGGACCC	59.966	66.667	16.93	0.00	44.63	4.46
2270	5237	3.160585	CCAGTTCTGGTGCCAGGA	58.839	61.111	17.23	6.76	43.75	3.86
2271	5238	2.674380	GCCAGTTCTGGTGCCAGG	60.674	66.667	17.23	3.97	43.75	4.45
2272	5239	3.052082	CGCCAGTTCTGGTGCCAG	61.052	66.667	17.56	11.82	44.86	4.85
2273	5240	4.641645	CCGCCAGTTCTGGTGCCA	62.642	66.667	22.43	0.00	38.09	4.92
2274	5241	3.248446	TACCGCCAGTTCTGGTGCC	62.248	63.158	22.43	6.02	38.09	5.01
2275	5242	1.741770	CTACCGCCAGTTCTGGTGC	60.742	63.158	22.43	8.49	38.09	5.01
2276	5243	0.537188	ATCTACCGCCAGTTCTGGTG	59.463	55.000	21.31	21.31	37.20	4.17
2277	5244	1.276622	AATCTACCGCCAGTTCTGGT	58.723	50.000	18.42	3.65	39.80	4.00
2278	5245	3.195661	GTTAATCTACCGCCAGTTCTGG	58.804	50.000	13.88	13.88	0.00	3.86
2279	5246	2.858344	CGTTAATCTACCGCCAGTTCTG	59.142	50.000	0.00	0.00	0.00	3.02
2280	5247	2.159142	CCGTTAATCTACCGCCAGTTCT	60.159	50.000	0.00	0.00	0.00	3.01
2281	5248	2.199236	CCGTTAATCTACCGCCAGTTC	58.801	52.381	0.00	0.00	0.00	3.01
2282	5249	1.741394	GCCGTTAATCTACCGCCAGTT	60.741	52.381	0.00	0.00	0.00	3.16
2283	5250	0.179092	GCCGTTAATCTACCGCCAGT	60.179	55.000	0.00	0.00	0.00	4.00
2284	5251	0.179094	TGCCGTTAATCTACCGCCAG	60.179	55.000	0.00	0.00	0.00	4.85
2285	5252	0.179094	CTGCCGTTAATCTACCGCCA	60.179	55.000	0.00	0.00	0.00	5.69
2286	5253	0.103572	TCTGCCGTTAATCTACCGCC	59.896	55.000	0.00	0.00	0.00	6.13
2287	5254	1.206523	GTCTGCCGTTAATCTACCGC	58.793	55.000	0.00	0.00	0.00	5.68
2288	5255	1.474017	CGTCTGCCGTTAATCTACCG	58.526	55.000	0.00	0.00	0.00	4.02
2289	5256	1.206523	GCGTCTGCCGTTAATCTACC	58.793	55.000	0.00	0.00	39.32	3.18
2308	5275	1.064296	CGTAGTAGCTGGCTGACGG	59.936	63.158	5.25	0.00	0.00	4.79
2309	5276	0.028242	CTCGTAGTAGCTGGCTGACG	59.972	60.000	15.32	15.32	32.85	4.35
2310	5277	1.064357	GACTCGTAGTAGCTGGCTGAC	59.936	57.143	5.25	0.48	0.00	3.51
2311	5278	1.380524	GACTCGTAGTAGCTGGCTGA	58.619	55.000	5.25	0.00	0.00	4.26
2312	5279	0.382515	GGACTCGTAGTAGCTGGCTG	59.617	60.000	5.25	0.00	0.00	4.85
2313	5280	0.034380	TGGACTCGTAGTAGCTGGCT	60.034	55.000	0.00	0.00	0.00	4.75
2314	5281	0.100861	GTGGACTCGTAGTAGCTGGC	59.899	60.000	0.00	0.00	0.00	4.85
2315	5282	0.377554	CGTGGACTCGTAGTAGCTGG	59.622	60.000	0.00	0.00	0.00	4.85
2316	5283	1.085091	ACGTGGACTCGTAGTAGCTG	58.915	55.000	0.00	0.00	42.35	4.24
2317	5284	1.085091	CACGTGGACTCGTAGTAGCT	58.915	55.000	7.95	0.00	42.27	3.32
2318	5285	0.098376	CCACGTGGACTCGTAGTAGC	59.902	60.000	31.31	0.00	42.27	3.58
2319	5286	0.098376	GCCACGTGGACTCGTAGTAG	59.902	60.000	38.30	7.23	42.27	2.57
2320	5287	0.606130	TGCCACGTGGACTCGTAGTA	60.606	55.000	38.30	8.62	42.27	1.82
2321	5288	1.248785	ATGCCACGTGGACTCGTAGT	61.249	55.000	38.30	10.37	42.27	2.73
2322	5289	0.736636	TATGCCACGTGGACTCGTAG	59.263	55.000	38.30	9.38	42.27	3.51
2323	5290	1.135315	GTTATGCCACGTGGACTCGTA	60.135	52.381	38.30	21.62	42.27	3.43
2324	5291	0.389426	GTTATGCCACGTGGACTCGT	60.389	55.000	38.30	22.67	45.10	4.18
2325	5292	1.410737	CGTTATGCCACGTGGACTCG	61.411	60.000	38.30	25.99	37.39	4.18
2326	5293	1.082117	CCGTTATGCCACGTGGACTC	61.082	60.000	38.30	20.66	38.57	3.36
2327	5294	1.079405	CCGTTATGCCACGTGGACT	60.079	57.895	38.30	24.52	38.57	3.85
2328	5295	1.356527	GACCGTTATGCCACGTGGAC	61.357	60.000	38.30	27.17	38.57	4.02
2329	5296	1.079681	GACCGTTATGCCACGTGGA	60.080	57.895	38.30	22.50	38.57	4.02
2330	5297	2.104253	GGACCGTTATGCCACGTGG	61.104	63.158	30.66	30.66	38.57	4.94
2331	5298	0.173935	TAGGACCGTTATGCCACGTG	59.826	55.000	9.08	9.08	38.57	4.49
2332	5299	0.174162	GTAGGACCGTTATGCCACGT	59.826	55.000	0.00	0.00	38.57	4.49
2333	5300	0.529119	GGTAGGACCGTTATGCCACG	60.529	60.000	0.00	0.00	40.02	4.94
2334	5301	3.374506	GGTAGGACCGTTATGCCAC	57.625	57.895	0.00	0.00	0.00	5.01
2344	5311	4.672251	TCCTGTAGCGGTAGGACC	57.328	61.111	1.92	0.00	38.15	4.46
2346	5313	1.028330	CGTGTCCTGTAGCGGTAGGA	61.028	60.000	1.92	1.92	40.68	2.94
2347	5314	1.432251	CGTGTCCTGTAGCGGTAGG	59.568	63.158	0.00	0.00	35.34	3.18
2348	5315	1.432251	CCGTGTCCTGTAGCGGTAG	59.568	63.158	0.00	0.00	39.41	3.18
2349	5316	2.703798	GCCGTGTCCTGTAGCGGTA	61.704	63.158	0.00	0.00	45.30	4.02
2350	5317	4.065281	GCCGTGTCCTGTAGCGGT	62.065	66.667	0.00	0.00	45.30	5.68
2353	5320	2.609183	CTACCGCCGTGTCCTGTAGC	62.609	65.000	0.00	0.00	0.00	3.58
2354	5321	1.432251	CTACCGCCGTGTCCTGTAG	59.568	63.158	0.00	0.00	0.00	2.74
2355	5322	2.048023	CCTACCGCCGTGTCCTGTA	61.048	63.158	0.00	0.00	0.00	2.74
2356	5323	3.379445	CCTACCGCCGTGTCCTGT	61.379	66.667	0.00	0.00	0.00	4.00
2357	5324	3.066190	TCCTACCGCCGTGTCCTG	61.066	66.667	0.00	0.00	0.00	3.86
2358	5325	3.066814	GTCCTACCGCCGTGTCCT	61.067	66.667	0.00	0.00	0.00	3.85
2359	5326	3.352338	CTGTCCTACCGCCGTGTCC	62.352	68.421	0.00	0.00	0.00	4.02
2360	5327	2.181021	CTGTCCTACCGCCGTGTC	59.819	66.667	0.00	0.00	0.00	3.67
2361	5328	4.065281	GCTGTCCTACCGCCGTGT	62.065	66.667	0.00	0.00	0.00	4.49
2362	5329	1.940883	TAAGCTGTCCTACCGCCGTG	61.941	60.000	0.00	0.00	0.00	4.94
2363	5330	1.664321	CTAAGCTGTCCTACCGCCGT	61.664	60.000	0.00	0.00	0.00	5.68
2364	5331	1.065928	CTAAGCTGTCCTACCGCCG	59.934	63.158	0.00	0.00	0.00	6.46
2365	5332	0.102663	GTCTAAGCTGTCCTACCGCC	59.897	60.000	0.00	0.00	0.00	6.13
2366	5333	1.104630	AGTCTAAGCTGTCCTACCGC	58.895	55.000	0.00	0.00	0.00	5.68
2367	5334	2.617774	GGTAGTCTAAGCTGTCCTACCG	59.382	54.545	13.30	0.00	38.58	4.02
2368	5335	2.617774	CGGTAGTCTAAGCTGTCCTACC	59.382	54.545	16.51	16.51	42.67	3.18
2369	5336	2.033174	GCGGTAGTCTAAGCTGTCCTAC	59.967	54.545	0.00	0.00	0.00	3.18
2370	5337	2.295885	GCGGTAGTCTAAGCTGTCCTA	58.704	52.381	0.00	0.00	0.00	2.94
2371	5338	1.104630	GCGGTAGTCTAAGCTGTCCT	58.895	55.000	0.00	0.00	0.00	3.85
2372	5339	0.102663	GGCGGTAGTCTAAGCTGTCC	59.897	60.000	8.07	0.00	0.00	4.02
2373	5340	0.815734	TGGCGGTAGTCTAAGCTGTC	59.184	55.000	8.07	0.00	0.00	3.51
2374	5341	1.486211	ATGGCGGTAGTCTAAGCTGT	58.514	50.000	8.07	0.00	0.00	4.40
2375	5342	2.623889	ACTATGGCGGTAGTCTAAGCTG	59.376	50.000	8.07	0.00	28.99	4.24
2376	5343	2.885894	GACTATGGCGGTAGTCTAAGCT	59.114	50.000	17.60	0.00	44.54	3.74
2377	5344	3.285816	GACTATGGCGGTAGTCTAAGC	57.714	52.381	17.60	1.12	44.54	3.09
2383	5350	1.112113	CCACAGACTATGGCGGTAGT	58.888	55.000	2.46	2.46	37.61	2.73
2384	5351	3.967886	CCACAGACTATGGCGGTAG	57.032	57.895	0.00	0.00	0.00	3.18
2390	5357	0.389391	CCTACCGCCACAGACTATGG	59.611	60.000	0.00	0.00	40.50	2.74
2391	5358	0.389391	CCCTACCGCCACAGACTATG	59.611	60.000	0.00	0.00	0.00	2.23
2392	5359	0.032416	ACCCTACCGCCACAGACTAT	60.032	55.000	0.00	0.00	0.00	2.12
2393	5360	0.682209	GACCCTACCGCCACAGACTA	60.682	60.000	0.00	0.00	0.00	2.59
2394	5361	1.982938	GACCCTACCGCCACAGACT	60.983	63.158	0.00	0.00	0.00	3.24
2395	5362	2.577593	GACCCTACCGCCACAGAC	59.422	66.667	0.00	0.00	0.00	3.51
2396	5363	3.066190	CGACCCTACCGCCACAGA	61.066	66.667	0.00	0.00	0.00	3.41
2397	5364	4.814294	GCGACCCTACCGCCACAG	62.814	72.222	0.00	0.00	46.22	3.66
2403	5370	4.728102	TGTTGCGCGACCCTACCG	62.728	66.667	24.73	0.00	0.00	4.02
2404	5371	3.116531	GTGTTGCGCGACCCTACC	61.117	66.667	24.73	4.24	0.00	3.18
2405	5372	2.048503	AGTGTTGCGCGACCCTAC	60.049	61.111	24.73	16.04	0.00	3.18
2406	5373	2.048597	CAGTGTTGCGCGACCCTA	60.049	61.111	24.73	3.54	0.00	3.53
2407	5374	4.988598	CCAGTGTTGCGCGACCCT	62.989	66.667	24.73	16.43	0.00	4.34
2415	5382	2.032071	AGTACCCGCCAGTGTTGC	59.968	61.111	0.00	0.00	0.00	4.17
2416	5383	1.070786	ACAGTACCCGCCAGTGTTG	59.929	57.895	0.00	0.00	0.00	3.33
2417	5384	1.070786	CACAGTACCCGCCAGTGTT	59.929	57.895	0.00	0.00	0.00	3.32
2418	5385	1.835267	TCACAGTACCCGCCAGTGT	60.835	57.895	0.00	0.00	0.00	3.55
2419	5386	1.374252	GTCACAGTACCCGCCAGTG	60.374	63.158	0.00	0.00	0.00	3.66
2420	5387	2.927580	CGTCACAGTACCCGCCAGT	61.928	63.158	0.00	0.00	0.00	4.00
2421	5388	2.126071	CGTCACAGTACCCGCCAG	60.126	66.667	0.00	0.00	0.00	4.85
2422	5389	2.598099	TCGTCACAGTACCCGCCA	60.598	61.111	0.00	0.00	0.00	5.69
2423	5390	2.181021	CTCGTCACAGTACCCGCC	59.819	66.667	0.00	0.00	0.00	6.13
2424	5391	1.308069	TACCTCGTCACAGTACCCGC	61.308	60.000	0.00	0.00	0.00	6.13
2425	5392	1.332997	GATACCTCGTCACAGTACCCG	59.667	57.143	0.00	0.00	0.00	5.28
2426	5393	2.358267	CAGATACCTCGTCACAGTACCC	59.642	54.545	0.00	0.00	0.00	3.69
2427	5394	3.015327	ACAGATACCTCGTCACAGTACC	58.985	50.000	0.00	0.00	0.00	3.34
2428	5395	4.698583	AACAGATACCTCGTCACAGTAC	57.301	45.455	0.00	0.00	0.00	2.73
2429	5396	5.336213	GGAAAACAGATACCTCGTCACAGTA	60.336	44.000	0.00	0.00	0.00	2.74
2430	5397	4.557205	GAAAACAGATACCTCGTCACAGT	58.443	43.478	0.00	0.00	0.00	3.55
2431	5398	3.927142	GGAAAACAGATACCTCGTCACAG	59.073	47.826	0.00	0.00	0.00	3.66
2432	5399	3.576982	AGGAAAACAGATACCTCGTCACA	59.423	43.478	0.00	0.00	0.00	3.58
2433	5400	4.189639	AGGAAAACAGATACCTCGTCAC	57.810	45.455	0.00	0.00	0.00	3.67
2434	5401	4.142227	GCTAGGAAAACAGATACCTCGTCA	60.142	45.833	0.00	0.00	34.42	4.35
2435	5402	4.361420	GCTAGGAAAACAGATACCTCGTC	58.639	47.826	0.00	0.00	34.42	4.20
2436	5403	3.181489	CGCTAGGAAAACAGATACCTCGT	60.181	47.826	0.00	0.00	34.42	4.18
2437	5404	3.372954	CGCTAGGAAAACAGATACCTCG	58.627	50.000	0.00	0.00	34.42	4.63
2438	5405	3.718815	CCGCTAGGAAAACAGATACCTC	58.281	50.000	0.00	0.00	41.02	3.85
2439	5406	2.158943	GCCGCTAGGAAAACAGATACCT	60.159	50.000	0.00	0.00	41.02	3.08
2440	5407	2.210961	GCCGCTAGGAAAACAGATACC	58.789	52.381	0.00	0.00	41.02	2.73
2441	5408	2.866762	CTGCCGCTAGGAAAACAGATAC	59.133	50.000	0.00	0.00	41.02	2.24
2442	5409	2.158957	CCTGCCGCTAGGAAAACAGATA	60.159	50.000	3.49	0.00	40.42	1.98
2443	5410	1.407437	CCTGCCGCTAGGAAAACAGAT	60.407	52.381	3.49	0.00	40.42	2.90
2444	5411	0.036388	CCTGCCGCTAGGAAAACAGA	60.036	55.000	3.49	0.00	40.42	3.41
2445	5412	1.026718	CCCTGCCGCTAGGAAAACAG	61.027	60.000	9.65	0.00	40.42	3.16
2446	5413	1.002624	CCCTGCCGCTAGGAAAACA	60.003	57.895	9.65	0.00	40.42	2.83
2447	5414	0.251073	TACCCTGCCGCTAGGAAAAC	59.749	55.000	9.65	0.00	40.42	2.43
2448	5415	0.251073	GTACCCTGCCGCTAGGAAAA	59.749	55.000	9.65	0.00	40.42	2.29
2449	5416	1.619807	GGTACCCTGCCGCTAGGAAA	61.620	60.000	0.00	0.00	40.42	3.13
2450	5417	2.062177	GGTACCCTGCCGCTAGGAA	61.062	63.158	0.00	0.00	40.42	3.36
2451	5418	2.443390	GGTACCCTGCCGCTAGGA	60.443	66.667	0.00	0.00	40.42	2.94
2452	5419	2.762459	TGGTACCCTGCCGCTAGG	60.762	66.667	10.07	0.00	41.62	3.02
2453	5420	2.355986	TGTGGTACCCTGCCGCTAG	61.356	63.158	10.07	0.00	37.40	3.42
2454	5421	2.284039	TGTGGTACCCTGCCGCTA	60.284	61.111	10.07	0.00	37.40	4.26
2455	5422	4.016706	GTGTGGTACCCTGCCGCT	62.017	66.667	10.07	0.00	37.40	5.52
2464	5431	2.580815	GGCGGTAGGGTGTGGTAC	59.419	66.667	0.00	0.00	0.00	3.34
2465	5432	2.491770	TACGGCGGTAGGGTGTGGTA	62.492	60.000	13.24	0.00	0.00	3.25
2466	5433	3.884704	TACGGCGGTAGGGTGTGGT	62.885	63.158	13.24	0.00	0.00	4.16
2467	5434	3.069946	TACGGCGGTAGGGTGTGG	61.070	66.667	13.24	0.00	0.00	4.17
2468	5435	2.493030	CTACGGCGGTAGGGTGTG	59.507	66.667	20.62	0.00	42.02	3.82
2474	5441	2.410469	CGAACCCTACGGCGGTAG	59.590	66.667	21.24	21.24	44.72	3.18
2475	5442	3.140141	CCGAACCCTACGGCGGTA	61.140	66.667	13.24	3.91	43.74	4.02
2481	5448	2.410469	CTACCGCCGAACCCTACG	59.590	66.667	0.00	0.00	0.00	3.51
2482	5449	2.789715	CCCTACCGCCGAACCCTAC	61.790	68.421	0.00	0.00	0.00	3.18
2483	5450	2.442643	CCCTACCGCCGAACCCTA	60.443	66.667	0.00	0.00	0.00	3.53
2504	5471	3.386867	GAAAGGAGTGCCATGCGCG	62.387	63.158	0.00	0.00	44.45	6.86
2505	5472	2.042831	AGAAAGGAGTGCCATGCGC	61.043	57.895	0.00	0.00	39.59	6.09
2506	5473	0.957395	ACAGAAAGGAGTGCCATGCG	60.957	55.000	0.00	0.00	36.29	4.73
2507	5474	0.524862	CACAGAAAGGAGTGCCATGC	59.475	55.000	0.00	0.00	36.29	4.06
2508	5475	1.808945	GTCACAGAAAGGAGTGCCATG	59.191	52.381	0.00	0.00	35.76	3.66
2509	5476	1.609061	CGTCACAGAAAGGAGTGCCAT	60.609	52.381	0.00	0.00	35.76	4.40
2510	5477	0.249868	CGTCACAGAAAGGAGTGCCA	60.250	55.000	0.00	0.00	35.76	4.92
2511	5478	0.033504	TCGTCACAGAAAGGAGTGCC	59.966	55.000	0.00	0.00	35.76	5.01
2512	5479	1.423395	CTCGTCACAGAAAGGAGTGC	58.577	55.000	0.00	0.00	35.76	4.40
2513	5480	1.613925	TCCTCGTCACAGAAAGGAGTG	59.386	52.381	0.00	0.00	33.00	3.51
2514	5481	1.996798	TCCTCGTCACAGAAAGGAGT	58.003	50.000	0.00	0.00	33.00	3.85
2515	5482	3.257393	CATTCCTCGTCACAGAAAGGAG	58.743	50.000	0.00	0.00	39.04	3.69
2516	5483	2.612972	GCATTCCTCGTCACAGAAAGGA	60.613	50.000	0.00	0.00	36.14	3.36
2517	5484	1.734465	GCATTCCTCGTCACAGAAAGG	59.266	52.381	0.00	0.00	0.00	3.11
2518	5485	1.391485	CGCATTCCTCGTCACAGAAAG	59.609	52.381	0.00	0.00	0.00	2.62
2519	5486	1.270094	ACGCATTCCTCGTCACAGAAA	60.270	47.619	0.00	0.00	34.84	2.52
2520	5487	0.317160	ACGCATTCCTCGTCACAGAA	59.683	50.000	0.00	0.00	34.84	3.02
2521	5488	0.317160	AACGCATTCCTCGTCACAGA	59.683	50.000	0.00	0.00	39.48	3.41
2522	5489	0.716108	GAACGCATTCCTCGTCACAG	59.284	55.000	0.00	0.00	39.48	3.66
2523	5490	2.822306	GAACGCATTCCTCGTCACA	58.178	52.632	0.00	0.00	39.48	3.58
2545	5512	4.462280	GTGGAACCCTACCGCCGG	62.462	72.222	0.00	0.00	32.47	6.13
2546	5513	2.918230	GATGTGGAACCCTACCGCCG	62.918	65.000	0.00	0.00	37.14	6.46
2547	5514	1.153229	GATGTGGAACCCTACCGCC	60.153	63.158	0.00	0.00	37.14	6.13
2548	5515	1.153229	GGATGTGGAACCCTACCGC	60.153	63.158	0.00	0.00	38.27	5.68
2549	5516	1.411612	GTAGGATGTGGAACCCTACCG	59.588	57.143	0.00	0.00	44.02	4.02
2552	5519	1.784358	CGGTAGGATGTGGAACCCTA	58.216	55.000	0.00	0.00	34.36	3.53
2553	5520	1.623542	GCGGTAGGATGTGGAACCCT	61.624	60.000	0.00	0.00	34.36	4.34
2554	5521	1.153229	GCGGTAGGATGTGGAACCC	60.153	63.158	0.00	0.00	34.36	4.11
2555	5522	1.153229	GGCGGTAGGATGTGGAACC	60.153	63.158	0.00	0.00	34.36	3.62
2556	5523	0.035820	TTGGCGGTAGGATGTGGAAC	60.036	55.000	0.00	0.00	37.35	3.62
2557	5524	0.251916	CTTGGCGGTAGGATGTGGAA	59.748	55.000	0.00	0.00	0.00	3.53
2558	5525	1.904771	CTTGGCGGTAGGATGTGGA	59.095	57.895	0.00	0.00	0.00	4.02
2559	5526	1.819632	GCTTGGCGGTAGGATGTGG	60.820	63.158	0.00	0.00	0.00	4.17
2560	5527	1.819632	GGCTTGGCGGTAGGATGTG	60.820	63.158	0.00	0.00	0.00	3.21
2561	5528	2.590092	GGCTTGGCGGTAGGATGT	59.410	61.111	0.00	0.00	0.00	3.06
2562	5529	2.203209	GGGCTTGGCGGTAGGATG	60.203	66.667	0.00	0.00	0.00	3.51
2563	5530	3.861797	CGGGCTTGGCGGTAGGAT	61.862	66.667	0.00	0.00	0.00	3.24
2564	5531	3.829927	TATACGGGCTTGGCGGTAGGA	62.830	57.143	16.64	7.57	0.00	2.94
2565	5532	1.466025	TATACGGGCTTGGCGGTAGG	61.466	60.000	16.64	0.00	0.00	3.18
2566	5533	0.390124	TTATACGGGCTTGGCGGTAG	59.610	55.000	16.64	0.17	0.00	3.18
2567	5534	0.104671	GTTATACGGGCTTGGCGGTA	59.895	55.000	14.66	14.66	0.00	4.02
2568	5535	1.153309	GTTATACGGGCTTGGCGGT	60.153	57.895	11.55	11.55	0.00	5.68
2569	5536	1.145377	AGTTATACGGGCTTGGCGG	59.855	57.895	0.54	0.54	0.00	6.13
2570	5537	1.772063	GCAGTTATACGGGCTTGGCG	61.772	60.000	0.00	0.00	0.00	5.69
2571	5538	0.463833	AGCAGTTATACGGGCTTGGC	60.464	55.000	0.00	0.00	31.36	4.52
2572	5539	1.583054	GAGCAGTTATACGGGCTTGG	58.417	55.000	0.00	0.00	34.63	3.61
2573	5540	1.209128	CGAGCAGTTATACGGGCTTG	58.791	55.000	0.00	0.00	34.63	4.01
2574	5541	0.529992	GCGAGCAGTTATACGGGCTT	60.530	55.000	0.00	0.00	34.63	4.35
2575	5542	1.067582	GCGAGCAGTTATACGGGCT	59.932	57.895	0.00	0.00	36.58	5.19
2576	5543	1.227147	TGCGAGCAGTTATACGGGC	60.227	57.895	0.00	0.00	0.00	6.13
2577	5544	0.874607	GGTGCGAGCAGTTATACGGG	60.875	60.000	0.00	0.00	0.00	5.28
2578	5545	0.874607	GGGTGCGAGCAGTTATACGG	60.875	60.000	0.00	0.00	0.00	4.02
2579	5546	0.102481	AGGGTGCGAGCAGTTATACG	59.898	55.000	0.00	0.00	0.00	3.06
2580	5547	2.545322	GGTAGGGTGCGAGCAGTTATAC	60.545	54.545	0.00	0.16	0.00	1.47
2581	5548	1.684983	GGTAGGGTGCGAGCAGTTATA	59.315	52.381	0.00	0.00	0.00	0.98
2582	5549	0.464452	GGTAGGGTGCGAGCAGTTAT	59.536	55.000	0.00	0.00	0.00	1.89
2583	5550	1.895238	GGTAGGGTGCGAGCAGTTA	59.105	57.895	0.00	0.00	0.00	2.24
2584	5551	2.663196	GGTAGGGTGCGAGCAGTT	59.337	61.111	0.00	0.00	0.00	3.16
2585	5552	3.760035	CGGTAGGGTGCGAGCAGT	61.760	66.667	0.00	0.00	0.00	4.40
2589	5556	4.514577	CTGGCGGTAGGGTGCGAG	62.515	72.222	0.00	0.00	0.00	5.03
2596	5563	2.683933	ACAGTCCCTGGCGGTAGG	60.684	66.667	0.00	0.00	35.51	3.18
2597	5564	2.579201	CACAGTCCCTGGCGGTAG	59.421	66.667	0.00	0.00	35.51	3.18
2598	5565	3.000819	CCACAGTCCCTGGCGGTA	61.001	66.667	0.00	0.00	35.51	4.02
2603	5570	3.000819	TACCGCCACAGTCCCTGG	61.001	66.667	0.00	0.00	35.51	4.45
2604	5571	2.579201	CTACCGCCACAGTCCCTG	59.421	66.667	0.00	0.00	37.52	4.45
2605	5572	2.683933	CCTACCGCCACAGTCCCT	60.684	66.667	0.00	0.00	0.00	4.20
2606	5573	3.782443	CCCTACCGCCACAGTCCC	61.782	72.222	0.00	0.00	0.00	4.46
2607	5574	2.682494	TCCCTACCGCCACAGTCC	60.682	66.667	0.00	0.00	0.00	3.85
2608	5575	2.722201	CCTCCCTACCGCCACAGTC	61.722	68.421	0.00	0.00	0.00	3.51
2609	5576	2.683933	CCTCCCTACCGCCACAGT	60.684	66.667	0.00	0.00	0.00	3.55
2610	5577	4.162690	GCCTCCCTACCGCCACAG	62.163	72.222	0.00	0.00	0.00	3.66
2633	5600	4.913126	GTCAACAGCCCTAGACGG	57.087	61.111	0.00	0.00	0.00	4.79
2634	5601	4.478195	CGTCAACAGCCCTAGACG	57.522	61.111	0.00	0.00	46.12	4.18
2635	5602	0.389948	CCACGTCAACAGCCCTAGAC	60.390	60.000	0.00	0.00	0.00	2.59
2636	5603	0.541063	TCCACGTCAACAGCCCTAGA	60.541	55.000	0.00	0.00	0.00	2.43
2637	5604	0.537188	ATCCACGTCAACAGCCCTAG	59.463	55.000	0.00	0.00	0.00	3.02
2638	5605	0.981183	AATCCACGTCAACAGCCCTA	59.019	50.000	0.00	0.00	0.00	3.53
2639	5606	0.981183	TAATCCACGTCAACAGCCCT	59.019	50.000	0.00	0.00	0.00	5.19
2640	5607	1.369625	CTAATCCACGTCAACAGCCC	58.630	55.000	0.00	0.00	0.00	5.19
2641	5608	0.727398	GCTAATCCACGTCAACAGCC	59.273	55.000	0.00	0.00	0.00	4.85
2642	5609	1.128692	GTGCTAATCCACGTCAACAGC	59.871	52.381	0.00	0.00	0.00	4.40
2643	5610	1.732259	GGTGCTAATCCACGTCAACAG	59.268	52.381	0.00	0.00	36.59	3.16
2644	5611	1.346395	AGGTGCTAATCCACGTCAACA	59.654	47.619	0.00	0.00	36.59	3.33
2645	5612	2.094762	AGGTGCTAATCCACGTCAAC	57.905	50.000	0.00	0.00	36.59	3.18
2646	5613	2.851263	AAGGTGCTAATCCACGTCAA	57.149	45.000	0.00	0.00	36.59	3.18
2647	5614	2.829720	AGTAAGGTGCTAATCCACGTCA	59.170	45.455	0.00	0.00	36.59	4.35
2648	5615	3.119245	TCAGTAAGGTGCTAATCCACGTC	60.119	47.826	0.00	0.00	36.59	4.34
2649	5616	2.829720	TCAGTAAGGTGCTAATCCACGT	59.170	45.455	0.00	0.00	36.59	4.49
2650	5617	3.187700	GTCAGTAAGGTGCTAATCCACG	58.812	50.000	0.00	0.00	36.59	4.94
2651	5618	4.184629	CTGTCAGTAAGGTGCTAATCCAC	58.815	47.826	0.00	0.00	35.00	4.02
2652	5619	3.197766	CCTGTCAGTAAGGTGCTAATCCA	59.802	47.826	0.00	0.00	0.00	3.41
2653	5620	3.432326	CCCTGTCAGTAAGGTGCTAATCC	60.432	52.174	0.00	0.00	32.45	3.01
2654	5621	3.197983	ACCCTGTCAGTAAGGTGCTAATC	59.802	47.826	0.00	0.00	32.45	1.75
2655	5622	3.055094	CACCCTGTCAGTAAGGTGCTAAT	60.055	47.826	12.19	0.00	43.02	1.73
2656	5623	2.301870	CACCCTGTCAGTAAGGTGCTAA	59.698	50.000	12.19	0.00	43.02	3.09
2657	5624	1.899814	CACCCTGTCAGTAAGGTGCTA	59.100	52.381	12.19	0.00	43.02	3.49
2658	5625	0.687354	CACCCTGTCAGTAAGGTGCT	59.313	55.000	12.19	0.00	43.02	4.40
2659	5626	3.233355	CACCCTGTCAGTAAGGTGC	57.767	57.895	12.19	0.00	43.02	5.01
2661	5628	1.072331	CAAGCACCCTGTCAGTAAGGT	59.928	52.381	0.00	0.00	32.45	3.50
2662	5629	1.611673	CCAAGCACCCTGTCAGTAAGG	60.612	57.143	0.00	0.00	34.31	2.69
2663	5630	1.813513	CCAAGCACCCTGTCAGTAAG	58.186	55.000	0.00	0.00	0.00	2.34
2664	5631	0.250727	GCCAAGCACCCTGTCAGTAA	60.251	55.000	0.00	0.00	0.00	2.24
2665	5632	1.374947	GCCAAGCACCCTGTCAGTA	59.625	57.895	0.00	0.00	0.00	2.74
2666	5633	2.113986	GCCAAGCACCCTGTCAGT	59.886	61.111	0.00	0.00	0.00	3.41
2667	5634	3.052082	CGCCAAGCACCCTGTCAG	61.052	66.667	0.00	0.00	0.00	3.51
2668	5635	4.641645	CCGCCAAGCACCCTGTCA	62.642	66.667	0.00	0.00	0.00	3.58
2669	5636	3.248446	TACCGCCAAGCACCCTGTC	62.248	63.158	0.00	0.00	0.00	3.51
2670	5637	3.246112	TACCGCCAAGCACCCTGT	61.246	61.111	0.00	0.00	0.00	4.00
2671	5638	2.436646	CTACCGCCAAGCACCCTG	60.437	66.667	0.00	0.00	0.00	4.45
2672	5639	3.717294	CCTACCGCCAAGCACCCT	61.717	66.667	0.00	0.00	0.00	4.34
2674	5641	4.410400	AGCCTACCGCCAAGCACC	62.410	66.667	0.00	0.00	38.78	5.01
2675	5642	3.127533	CAGCCTACCGCCAAGCAC	61.128	66.667	0.00	0.00	38.78	4.40
2676	5643	3.190738	AACAGCCTACCGCCAAGCA	62.191	57.895	0.00	0.00	38.78	3.91
2677	5644	2.359975	AACAGCCTACCGCCAAGC	60.360	61.111	0.00	0.00	38.78	4.01
2678	5645	1.003839	TGAACAGCCTACCGCCAAG	60.004	57.895	0.00	0.00	38.78	3.61
2679	5646	1.003839	CTGAACAGCCTACCGCCAA	60.004	57.895	0.00	0.00	38.78	4.52
2680	5647	2.662596	CTGAACAGCCTACCGCCA	59.337	61.111	0.00	0.00	38.78	5.69
2681	5648	2.125106	CCTGAACAGCCTACCGCC	60.125	66.667	0.00	0.00	38.78	6.13
2682	5649	2.125106	CCCTGAACAGCCTACCGC	60.125	66.667	0.00	0.00	37.98	5.68
2683	5650	0.899720	TAACCCTGAACAGCCTACCG	59.100	55.000	0.00	0.00	0.00	4.02
2684	5651	1.065636	GGTAACCCTGAACAGCCTACC	60.066	57.143	0.00	0.00	0.00	3.18
2685	5652	1.405121	CGGTAACCCTGAACAGCCTAC	60.405	57.143	0.00	0.00	0.00	3.18
2686	5653	0.899720	CGGTAACCCTGAACAGCCTA	59.100	55.000	0.00	0.00	0.00	3.93
2687	5654	1.677552	CGGTAACCCTGAACAGCCT	59.322	57.895	0.00	0.00	0.00	4.58
2688	5655	2.038837	GCGGTAACCCTGAACAGCC	61.039	63.158	0.00	0.00	31.67	4.85
2689	5656	2.038837	GGCGGTAACCCTGAACAGC	61.039	63.158	0.00	0.00	36.28	4.40
2690	5657	1.740296	CGGCGGTAACCCTGAACAG	60.740	63.158	0.00	0.00	0.00	3.16
2691	5658	2.042404	AACGGCGGTAACCCTGAACA	62.042	55.000	13.24	0.00	0.00	3.18
2692	5659	1.301953	AACGGCGGTAACCCTGAAC	60.302	57.895	13.24	0.00	0.00	3.18
2693	5660	1.301874	CAACGGCGGTAACCCTGAA	60.302	57.895	13.24	0.00	0.00	3.02
2694	5661	2.344500	CAACGGCGGTAACCCTGA	59.656	61.111	13.24	0.00	0.00	3.86
2695	5662	3.428282	GCAACGGCGGTAACCCTG	61.428	66.667	13.24	0.00	0.00	4.45
2696	5663	4.710167	GGCAACGGCGGTAACCCT	62.710	66.667	13.24	0.00	42.47	4.34
2699	5666	4.710167	AGGGGCAACGGCGGTAAC	62.710	66.667	13.24	0.00	42.47	2.50
2700	5667	4.708386	CAGGGGCAACGGCGGTAA	62.708	66.667	13.24	0.00	42.47	2.85
2711	5678	1.303806	TTTTCTTACCGCCAGGGGC	60.304	57.895	0.00	0.00	46.75	5.80
2712	5679	0.679960	CCTTTTCTTACCGCCAGGGG	60.680	60.000	0.00	0.00	43.47	4.79
2713	5680	0.679960	CCCTTTTCTTACCGCCAGGG	60.680	60.000	0.00	0.00	43.47	4.45
2714	5681	0.679960	CCCCTTTTCTTACCGCCAGG	60.680	60.000	0.00	0.00	45.13	4.45
2715	5682	1.313091	GCCCCTTTTCTTACCGCCAG	61.313	60.000	0.00	0.00	0.00	4.85
2716	5683	1.303806	GCCCCTTTTCTTACCGCCA	60.304	57.895	0.00	0.00	0.00	5.69
2717	5684	2.050350	GGCCCCTTTTCTTACCGCC	61.050	63.158	0.00	0.00	0.00	6.13
2718	5685	1.303806	TGGCCCCTTTTCTTACCGC	60.304	57.895	0.00	0.00	0.00	5.68
2719	5686	0.326927	TCTGGCCCCTTTTCTTACCG	59.673	55.000	0.00	0.00	0.00	4.02
2720	5687	2.242452	AGATCTGGCCCCTTTTCTTACC	59.758	50.000	0.00	0.00	0.00	2.85
2721	5688	3.054361	TGAGATCTGGCCCCTTTTCTTAC	60.054	47.826	0.00	0.00	0.00	2.34
2722	5689	3.189606	TGAGATCTGGCCCCTTTTCTTA	58.810	45.455	0.00	0.00	0.00	2.10
2723	5690	1.995542	TGAGATCTGGCCCCTTTTCTT	59.004	47.619	0.00	0.00	0.00	2.52
2724	5691	1.673767	TGAGATCTGGCCCCTTTTCT	58.326	50.000	0.00	0.00	0.00	2.52
2725	5692	2.514458	TTGAGATCTGGCCCCTTTTC	57.486	50.000	0.00	0.00	0.00	2.29
2726	5693	2.999185	TTTGAGATCTGGCCCCTTTT	57.001	45.000	0.00	0.00	0.00	2.27
2727	5694	2.999185	TTTTGAGATCTGGCCCCTTT	57.001	45.000	0.00	0.00	0.00	3.11
2728	5695	2.999185	TTTTTGAGATCTGGCCCCTT	57.001	45.000	0.00	0.00	0.00	3.95
2754	5721	6.474102	GGAAAATTGAGATCTGACTCTACGTC	59.526	42.308	0.00	0.00	43.14	4.34
2755	5722	6.153680	AGGAAAATTGAGATCTGACTCTACGT	59.846	38.462	0.00	0.00	37.73	3.57
2756	5723	6.568869	AGGAAAATTGAGATCTGACTCTACG	58.431	40.000	0.00	0.00	37.73	3.51
2757	5724	8.037758	TCAAGGAAAATTGAGATCTGACTCTAC	58.962	37.037	0.00	0.00	34.31	2.59
2758	5725	8.138928	TCAAGGAAAATTGAGATCTGACTCTA	57.861	34.615	0.00	0.00	34.31	2.43
2759	5726	7.013823	TCAAGGAAAATTGAGATCTGACTCT	57.986	36.000	0.00	0.72	34.31	3.24
2760	5727	7.862512	ATCAAGGAAAATTGAGATCTGACTC	57.137	36.000	0.00	0.00	42.20	3.36
2761	5728	9.745018	TTTATCAAGGAAAATTGAGATCTGACT	57.255	29.630	0.00	0.00	42.20	3.41
2764	5731	9.798994	CCTTTTATCAAGGAAAATTGAGATCTG	57.201	33.333	0.00	0.00	42.20	2.90
2765	5732	8.975295	CCCTTTTATCAAGGAAAATTGAGATCT	58.025	33.333	0.00	0.00	42.20	2.75
2766	5733	8.753133	ACCCTTTTATCAAGGAAAATTGAGATC	58.247	33.333	1.96	0.00	42.20	2.75
2767	5734	8.670521	ACCCTTTTATCAAGGAAAATTGAGAT	57.329	30.769	1.96	0.00	42.20	2.75
2768	5735	7.728083	TGACCCTTTTATCAAGGAAAATTGAGA	59.272	33.333	1.96	0.00	42.20	3.27
2769	5736	7.895759	TGACCCTTTTATCAAGGAAAATTGAG	58.104	34.615	1.96	0.00	42.20	3.02
2770	5737	7.847711	TGACCCTTTTATCAAGGAAAATTGA	57.152	32.000	1.96	0.00	43.04	2.57
2771	5738	8.900983	TTTGACCCTTTTATCAAGGAAAATTG	57.099	30.769	1.96	0.00	39.81	2.32
2772	5739	9.337396	GTTTTGACCCTTTTATCAAGGAAAATT	57.663	29.630	1.96	0.00	39.81	1.82
2773	5740	8.490311	TGTTTTGACCCTTTTATCAAGGAAAAT	58.510	29.630	1.96	0.00	39.81	1.82
2774	5741	7.766738	GTGTTTTGACCCTTTTATCAAGGAAAA	59.233	33.333	1.96	0.00	39.81	2.29
2775	5742	7.269316	GTGTTTTGACCCTTTTATCAAGGAAA	58.731	34.615	1.96	0.00	39.81	3.13
2776	5743	6.460399	CGTGTTTTGACCCTTTTATCAAGGAA	60.460	38.462	1.96	0.00	39.81	3.36
2777	5744	5.009210	CGTGTTTTGACCCTTTTATCAAGGA	59.991	40.000	1.96	0.00	39.81	3.36
2778	5745	5.009210	TCGTGTTTTGACCCTTTTATCAAGG	59.991	40.000	0.00	0.00	36.26	3.61
2779	5746	6.067263	TCGTGTTTTGACCCTTTTATCAAG	57.933	37.500	0.00	0.00	36.26	3.02
2780	5747	6.452494	TTCGTGTTTTGACCCTTTTATCAA	57.548	33.333	0.00	0.00	33.03	2.57
2781	5748	6.452494	TTTCGTGTTTTGACCCTTTTATCA	57.548	33.333	0.00	0.00	0.00	2.15
2782	5749	7.940178	AATTTCGTGTTTTGACCCTTTTATC	57.060	32.000	0.00	0.00	0.00	1.75
2783	5750	8.608317	CAAAATTTCGTGTTTTGACCCTTTTAT	58.392	29.630	13.46	0.00	45.02	1.40
2784	5751	7.413109	GCAAAATTTCGTGTTTTGACCCTTTTA	60.413	33.333	19.19	0.00	45.02	1.52
2785	5752	6.621812	GCAAAATTTCGTGTTTTGACCCTTTT	60.622	34.615	19.19	0.00	45.02	2.27
2786	5753	5.163804	GCAAAATTTCGTGTTTTGACCCTTT	60.164	36.000	19.19	0.00	45.02	3.11
2787	5754	4.331443	GCAAAATTTCGTGTTTTGACCCTT	59.669	37.500	19.19	0.00	45.02	3.95
2788	5755	3.868661	GCAAAATTTCGTGTTTTGACCCT	59.131	39.130	19.19	0.00	45.02	4.34
2789	5756	3.001838	GGCAAAATTTCGTGTTTTGACCC	59.998	43.478	19.19	11.78	44.81	4.46
2790	5757	4.190304	GGCAAAATTTCGTGTTTTGACC	57.810	40.909	19.19	16.15	44.81	4.02
2792	5759	3.861840	TGGGCAAAATTTCGTGTTTTGA	58.138	36.364	19.19	4.00	45.02	2.69
2793	5760	4.511082	AGATGGGCAAAATTTCGTGTTTTG	59.489	37.500	14.02	14.02	45.01	2.44
2794	5761	4.702831	AGATGGGCAAAATTTCGTGTTTT	58.297	34.783	0.00	0.00	0.00	2.43
2795	5762	4.335400	AGATGGGCAAAATTTCGTGTTT	57.665	36.364	0.00	0.00	0.00	2.83
2796	5763	4.614993	CGTAGATGGGCAAAATTTCGTGTT	60.615	41.667	0.00	0.00	0.00	3.32
2797	5764	3.119990	CGTAGATGGGCAAAATTTCGTGT	60.120	43.478	0.00	0.00	0.00	4.49
2798	5765	3.126171	TCGTAGATGGGCAAAATTTCGTG	59.874	43.478	0.00	0.00	0.00	4.35
2799	5766	3.126343	GTCGTAGATGGGCAAAATTTCGT	59.874	43.478	0.00	0.00	40.67	3.85
2800	5767	3.126171	TGTCGTAGATGGGCAAAATTTCG	59.874	43.478	0.00	0.00	40.67	3.46
2801	5768	4.695217	TGTCGTAGATGGGCAAAATTTC	57.305	40.909	0.00	0.00	40.67	2.17
2802	5769	4.522789	AGTTGTCGTAGATGGGCAAAATTT	59.477	37.500	0.00	0.00	40.67	1.82
2803	5770	4.079253	AGTTGTCGTAGATGGGCAAAATT	58.921	39.130	0.00	0.00	40.67	1.82
2804	5771	3.686016	AGTTGTCGTAGATGGGCAAAAT	58.314	40.909	0.00	0.00	40.67	1.82
2805	5772	3.134574	AGTTGTCGTAGATGGGCAAAA	57.865	42.857	0.00	0.00	40.67	2.44
2806	5773	2.811431	CAAGTTGTCGTAGATGGGCAAA	59.189	45.455	0.00	0.00	40.67	3.68
2807	5774	2.224426	ACAAGTTGTCGTAGATGGGCAA	60.224	45.455	1.64	0.00	40.67	4.52
2808	5775	1.346395	ACAAGTTGTCGTAGATGGGCA	59.654	47.619	1.64	0.00	40.67	5.36
2809	5776	2.000447	GACAAGTTGTCGTAGATGGGC	59.000	52.381	19.71	0.00	40.67	5.36
2876	5848	1.478510	AGTCATAACTCACGAGGCAGG	59.521	52.381	0.00	0.00	0.00	4.85
3043	6016	5.344207	AGCGTGACAAGTTTAGCTAAAAG	57.656	39.130	20.22	14.88	32.73	2.27
3161	6134	8.762481	AAAAGGACCAGAATTTAAGTAACAGT	57.238	30.769	0.00	0.00	0.00	3.55
3233	6207	3.387397	AGTAAGTTCAGGTTGTGTACGC	58.613	45.455	0.00	0.00	31.88	4.42
3596	6571	7.120285	CCGCATCACTATCAATAATTTCCTCAT	59.880	37.037	0.00	0.00	0.00	2.90
3603	6578	7.936847	TCCTTTACCGCATCACTATCAATAATT	59.063	33.333	0.00	0.00	0.00	1.40
3676	6661	0.109226	GACTTCCTCTCGTGGTTCGG	60.109	60.000	0.00	0.00	40.32	4.30
3734	6719	7.053498	TGATCCGGTCAAAAGATAATTGATCA	58.947	34.615	0.00	0.00	37.69	2.92
3800	6787	6.859112	AGCATTAAGATCTCATACCCGTAT	57.141	37.500	0.00	0.00	0.00	3.06
3874	6861	0.833287	CATCCCGATGGGTGACTTCT	59.167	55.000	1.04	0.00	44.74	2.85
3889	7062	3.592059	TCGGTTAGTAACAAGCACATCC	58.408	45.455	14.81	0.00	0.00	3.51
3959	7132	4.278310	TGAGATAGGACAACCGATTCTCA	58.722	43.478	0.00	0.00	42.25	3.27
3960	7133	4.865776	CTGAGATAGGACAACCGATTCTC	58.134	47.826	0.00	0.00	41.83	2.87
3977	7150	2.224821	CCTGCAATAGGGCCTGAGA	58.775	57.895	18.53	0.00	43.33	3.27
3989	7162	5.448654	AGATACATCCATTTAAGCCTGCAA	58.551	37.500	0.00	0.00	0.00	4.08
4025	7198	6.472808	GTCGCCGAAATGAATATATCTAGACC	59.527	42.308	0.00	0.00	0.00	3.85
4341	7514	1.372683	GAGCTTGTCCTGCAGACCA	59.627	57.895	17.39	8.32	45.68	4.02
4568	7743	6.169094	ACTATTGATCTGGATATTTGGCTCG	58.831	40.000	0.00	0.00	0.00	5.03
4640	7815	3.680490	TCGTGCAAAGATAAATGTCCCA	58.320	40.909	0.00	0.00	0.00	4.37
4658	7833	1.202463	GCATGCAGGTCATACTCTCGT	60.202	52.381	14.21	0.00	33.19	4.18
4694	7869	4.491676	GAGATCGCCAGTTTACTTACACA	58.508	43.478	0.00	0.00	0.00	3.72
4696	7871	3.766151	CGAGATCGCCAGTTTACTTACA	58.234	45.455	0.00	0.00	0.00	2.41
4737	7912	9.333497	CGATATGCATAAACAATTAATGGAGTG	57.667	33.333	11.13	0.00	0.00	3.51
4783	7958	5.388111	GGTTTTAGTTGTTATCTTCGTGCC	58.612	41.667	0.00	0.00	0.00	5.01
4784	7959	5.077424	CGGTTTTAGTTGTTATCTTCGTGC	58.923	41.667	0.00	0.00	0.00	5.34
4790	7965	6.567891	GCAAAGAGCGGTTTTAGTTGTTATCT	60.568	38.462	0.00	0.00	0.00	1.98
4892	8067	6.426587	ACATAATCACATGAGCCCTAAAACT	58.573	36.000	0.00	0.00	0.00	2.66
5005	8184	1.525941	GGCCAAAGCACATGCAATTT	58.474	45.000	6.64	0.00	45.16	1.82
5025	8204	6.600822	TGATGGCATTTCCTAAAGAGAAGAAG	59.399	38.462	0.00	0.00	35.26	2.85
5096	8275	6.913545	ACTAGGGAGCTTAGTGTTATAGAGT	58.086	40.000	0.00	0.00	30.46	3.24
5231	8412	7.970614	GTGAGACCTTAAAAATTAGGAAGCATG	59.029	37.037	0.00	0.00	35.45	4.06
5305	8487	6.937465	GGAAGAGATTGAGAAAGTGTTTACCT	59.063	38.462	0.00	0.00	0.00	3.08
5309	8491	7.830099	AATGGAAGAGATTGAGAAAGTGTTT	57.170	32.000	0.00	0.00	0.00	2.83
5389	8574	7.701809	TCGTAAACCAAATCCAAAATTGAAC	57.298	32.000	0.00	0.00	0.00	3.18
5483	8671	0.996762	TTTCAGGTGGTGGGAGGGTT	60.997	55.000	0.00	0.00	0.00	4.11
5504	8694	2.286872	CATCACATGGTGGAGCTTCTC	58.713	52.381	0.00	0.00	33.87	2.87
5535	8726	4.864806	GGTGATCGCATGTACTACCATATG	59.135	45.833	8.82	0.00	0.00	1.78
5540	8731	1.335810	TCGGTGATCGCATGTACTACC	59.664	52.381	8.82	0.00	39.05	3.18
5663	8861	2.225041	CGGGTGGGGAGATGATAGAGTA	60.225	54.545	0.00	0.00	0.00	2.59
5734	8937	9.631639	GGTCAAAATTAACGAAATTTGACTTTG	57.368	29.630	21.57	12.65	45.12	2.77
5748	8951	4.615223	GCTCCGAACCTGGTCAAAATTAAC	60.615	45.833	0.00	0.00	0.00	2.01
5753	8956	0.181587	TGCTCCGAACCTGGTCAAAA	59.818	50.000	0.00	0.00	0.00	2.44

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.