Multiple sequence alignment - TraesCS5D01G291600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G291600 chr5D 100.000 4261 0 0 1 4261 389438066 389442326 0.000000e+00 7869.0
1 TraesCS5D01G291600 chr5D 85.714 840 75 22 1399 2197 389378000 389378835 0.000000e+00 845.0
2 TraesCS5D01G291600 chr5D 93.062 418 25 4 3847 4261 545122746 545122330 3.640000e-170 608.0
3 TraesCS5D01G291600 chr5D 89.337 347 30 5 3330 3673 389409481 389409823 3.040000e-116 429.0
4 TraesCS5D01G291600 chr5D 85.417 336 39 4 818 1148 389409827 389410157 1.470000e-89 340.0
5 TraesCS5D01G291600 chr5D 90.148 203 15 4 2589 2791 389378999 389379196 4.230000e-65 259.0
6 TraesCS5D01G291600 chr5D 88.387 155 12 1 3142 3296 389409351 389409499 9.410000e-42 182.0
7 TraesCS5D01G291600 chr5D 94.872 78 3 1 657 734 286953745 286953669 2.080000e-23 121.0
8 TraesCS5D01G291600 chr5D 94.667 75 4 0 657 731 418873986 418874060 2.690000e-22 117.0
9 TraesCS5D01G291600 chr5A 93.186 2084 110 20 1534 3601 492435609 492437676 0.000000e+00 3033.0
10 TraesCS5D01G291600 chr5A 90.262 1489 101 20 2370 3843 492362298 492363757 0.000000e+00 1906.0
11 TraesCS5D01G291600 chr5A 90.262 1489 101 20 2370 3843 492384965 492386424 0.000000e+00 1906.0
12 TraesCS5D01G291600 chr5A 86.661 1222 113 29 1649 2830 492392035 492393246 0.000000e+00 1308.0
13 TraesCS5D01G291600 chr5A 86.416 1222 116 29 1649 2830 492368769 492369980 0.000000e+00 1291.0
14 TraesCS5D01G291600 chr5A 88.030 1061 91 17 1399 2425 492352281 492353339 0.000000e+00 1223.0
15 TraesCS5D01G291600 chr5A 91.203 773 58 8 1535 2301 492361519 492362287 0.000000e+00 1042.0
16 TraesCS5D01G291600 chr5A 91.203 773 58 8 1535 2301 492384186 492384954 0.000000e+00 1042.0
17 TraesCS5D01G291600 chr5A 94.118 663 23 4 1 658 492433871 492434522 0.000000e+00 994.0
18 TraesCS5D01G291600 chr5A 96.046 607 24 0 730 1336 492434521 492435127 0.000000e+00 989.0
19 TraesCS5D01G291600 chr5A 96.046 607 14 1 730 1336 492360437 492361033 0.000000e+00 979.0
20 TraesCS5D01G291600 chr5A 92.412 369 21 4 296 658 492360071 492360438 1.760000e-143 520.0
21 TraesCS5D01G291600 chr5A 92.412 369 21 4 296 658 492381995 492382362 1.760000e-143 520.0
22 TraesCS5D01G291600 chr5A 98.618 217 3 0 1120 1336 492383484 492383700 6.680000e-103 385.0
23 TraesCS5D01G291600 chr5A 94.570 221 10 1 1330 1548 492361282 492361502 1.470000e-89 340.0
24 TraesCS5D01G291600 chr5A 94.570 221 10 1 1330 1548 492383949 492384169 1.470000e-89 340.0
25 TraesCS5D01G291600 chr5A 93.981 216 13 0 1330 1545 492435376 492435591 1.140000e-85 327.0
26 TraesCS5D01G291600 chr5A 91.584 202 13 4 3648 3846 492617020 492617220 4.200000e-70 276.0
27 TraesCS5D01G291600 chr5A 95.122 123 6 0 126 248 492359952 492360074 1.210000e-45 195.0
28 TraesCS5D01G291600 chr5A 95.122 123 6 0 126 248 492381876 492381998 1.210000e-45 195.0
29 TraesCS5D01G291600 chr5A 91.241 137 2 1 730 866 492382361 492382487 1.220000e-40 178.0
30 TraesCS5D01G291600 chrUn 90.262 1489 101 20 2370 3843 307472275 307473734 0.000000e+00 1906.0
31 TraesCS5D01G291600 chrUn 86.416 1222 116 29 1649 2830 338827965 338829176 0.000000e+00 1291.0
32 TraesCS5D01G291600 chrUn 84.718 1276 127 31 1652 2881 268842030 268840777 0.000000e+00 1214.0
33 TraesCS5D01G291600 chrUn 84.676 1279 128 31 1649 2881 273477551 273478807 0.000000e+00 1214.0
34 TraesCS5D01G291600 chrUn 91.203 773 58 8 1535 2301 307471496 307472264 0.000000e+00 1042.0
35 TraesCS5D01G291600 chrUn 86.411 677 79 8 2643 3316 333558299 333558965 0.000000e+00 728.0
36 TraesCS5D01G291600 chrUn 92.412 369 21 4 296 658 318362858 318362491 1.760000e-143 520.0
37 TraesCS5D01G291600 chrUn 88.825 349 33 4 3330 3673 333558926 333559273 1.420000e-114 424.0
38 TraesCS5D01G291600 chrUn 98.618 217 3 0 1120 1336 307470794 307471010 6.680000e-103 385.0
39 TraesCS5D01G291600 chrUn 94.570 221 10 1 1330 1548 307471259 307471479 1.470000e-89 340.0
40 TraesCS5D01G291600 chrUn 82.840 338 46 6 818 1148 333559277 333559609 4.170000e-75 292.0
41 TraesCS5D01G291600 chrUn 95.122 123 6 0 126 248 318362977 318362855 1.210000e-45 195.0
42 TraesCS5D01G291600 chrUn 93.130 131 7 2 3447 3576 268840759 268840630 1.560000e-44 191.0
43 TraesCS5D01G291600 chrUn 91.241 137 2 1 730 866 318362492 318362366 1.220000e-40 178.0
44 TraesCS5D01G291600 chr5B 89.470 1491 116 12 2370 3846 468913979 468915442 0.000000e+00 1845.0
45 TraesCS5D01G291600 chr5B 95.139 1008 44 4 2843 3846 468843955 468844961 0.000000e+00 1585.0
46 TraesCS5D01G291600 chr5B 96.211 607 13 1 730 1336 468841613 468842209 0.000000e+00 985.0
47 TraesCS5D01G291600 chr5B 92.738 661 41 6 1 658 468902615 468903271 0.000000e+00 948.0
48 TraesCS5D01G291600 chr5B 94.646 579 24 5 1794 2367 468842853 468843429 0.000000e+00 891.0
49 TraesCS5D01G291600 chr5B 85.563 852 90 19 2046 2875 468805345 468806185 0.000000e+00 861.0
50 TraesCS5D01G291600 chr5B 94.697 528 27 1 807 1334 468903300 468903826 0.000000e+00 819.0
51 TraesCS5D01G291600 chr5B 89.107 661 52 13 1 658 468840971 468841614 0.000000e+00 804.0
52 TraesCS5D01G291600 chr5B 96.729 428 12 1 2419 2844 468843424 468843851 0.000000e+00 712.0
53 TraesCS5D01G291600 chr5B 96.269 402 13 2 1330 1731 468842461 468842860 0.000000e+00 658.0
54 TraesCS5D01G291600 chr5B 89.823 452 37 7 1535 1980 468904310 468904758 4.780000e-159 571.0
55 TraesCS5D01G291600 chr5B 94.091 220 11 1 1330 1549 468904077 468904294 2.460000e-87 333.0
56 TraesCS5D01G291600 chr5B 83.737 289 35 4 820 1102 468806416 468806698 3.270000e-66 263.0
57 TraesCS5D01G291600 chr5B 83.217 286 40 4 820 1102 468828015 468828295 5.470000e-64 255.0
58 TraesCS5D01G291600 chr5B 83.333 234 15 7 3444 3676 468806203 468806413 1.210000e-45 195.0
59 TraesCS5D01G291600 chr5B 83.333 234 15 7 3444 3676 468827802 468828012 1.210000e-45 195.0
60 TraesCS5D01G291600 chr5B 97.222 36 1 0 730 765 468903270 468903305 1.280000e-05 62.1
61 TraesCS5D01G291600 chr1D 93.478 414 26 1 3849 4261 482313568 482313155 7.830000e-172 614.0
62 TraesCS5D01G291600 chr1D 92.629 407 28 2 3849 4254 198902409 198902814 6.140000e-163 584.0
63 TraesCS5D01G291600 chr3D 93.237 414 26 2 3849 4261 587508158 587508570 3.640000e-170 608.0
64 TraesCS5D01G291600 chr3D 92.271 414 31 1 3849 4261 13602864 13602451 1.710000e-163 586.0
65 TraesCS5D01G291600 chr3D 94.048 84 3 2 653 736 120008615 120008696 4.470000e-25 126.0
66 TraesCS5D01G291600 chr7D 93.939 396 22 2 3861 4255 411022919 411023313 7.890000e-167 597.0
67 TraesCS5D01G291600 chr7D 92.754 414 26 4 3850 4261 167225979 167225568 2.840000e-166 595.0
68 TraesCS5D01G291600 chr7D 96.000 75 3 0 657 731 45636117 45636191 5.790000e-24 122.0
69 TraesCS5D01G291600 chr6D 92.875 407 27 2 3849 4254 288592812 288592407 1.320000e-164 590.0
70 TraesCS5D01G291600 chr4D 91.847 417 33 1 3846 4261 425281030 425281446 7.940000e-162 580.0
71 TraesCS5D01G291600 chr2D 93.103 87 5 1 650 736 120560103 120560018 4.470000e-25 126.0
72 TraesCS5D01G291600 chr2D 91.667 84 3 2 657 737 639892317 639892399 3.480000e-21 113.0
73 TraesCS5D01G291600 chr7A 94.937 79 3 1 654 731 206709849 206709771 5.790000e-24 122.0
74 TraesCS5D01G291600 chr2B 93.827 81 3 2 651 731 754965169 754965247 2.080000e-23 121.0
75 TraesCS5D01G291600 chr3B 92.593 81 4 2 654 734 671152649 671152571 9.680000e-22 115.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G291600 chr5D 389438066 389442326 4260 False 7869.000000 7869 100.000000 1 4261 1 chr5D.!!$F1 4260
1 TraesCS5D01G291600 chr5D 389378000 389379196 1196 False 552.000000 845 87.931000 1399 2791 2 chr5D.!!$F3 1392
2 TraesCS5D01G291600 chr5D 389409351 389410157 806 False 317.000000 429 87.713667 818 3673 3 chr5D.!!$F4 2855
3 TraesCS5D01G291600 chr5A 492433871 492437676 3805 False 1335.750000 3033 94.332750 1 3601 4 chr5A.!!$F7 3600
4 TraesCS5D01G291600 chr5A 492392035 492393246 1211 False 1308.000000 1308 86.661000 1649 2830 1 chr5A.!!$F3 1181
5 TraesCS5D01G291600 chr5A 492368769 492369980 1211 False 1291.000000 1291 86.416000 1649 2830 1 chr5A.!!$F2 1181
6 TraesCS5D01G291600 chr5A 492352281 492353339 1058 False 1223.000000 1223 88.030000 1399 2425 1 chr5A.!!$F1 1026
7 TraesCS5D01G291600 chr5A 492359952 492363757 3805 False 830.333333 1906 93.269167 126 3843 6 chr5A.!!$F5 3717
8 TraesCS5D01G291600 chr5A 492381876 492386424 4548 False 652.285714 1906 93.346857 126 3843 7 chr5A.!!$F6 3717
9 TraesCS5D01G291600 chrUn 338827965 338829176 1211 False 1291.000000 1291 86.416000 1649 2830 1 chrUn.!!$F2 1181
10 TraesCS5D01G291600 chrUn 273477551 273478807 1256 False 1214.000000 1214 84.676000 1649 2881 1 chrUn.!!$F1 1232
11 TraesCS5D01G291600 chrUn 307470794 307473734 2940 False 918.250000 1906 93.663250 1120 3843 4 chrUn.!!$F3 2723
12 TraesCS5D01G291600 chrUn 268840630 268842030 1400 True 702.500000 1214 88.924000 1652 3576 2 chrUn.!!$R1 1924
13 TraesCS5D01G291600 chrUn 333558299 333559609 1310 False 481.333333 728 86.025333 818 3673 3 chrUn.!!$F4 2855
14 TraesCS5D01G291600 chrUn 318362366 318362977 611 True 297.666667 520 92.925000 126 866 3 chrUn.!!$R2 740
15 TraesCS5D01G291600 chr5B 468913979 468915442 1463 False 1845.000000 1845 89.470000 2370 3846 1 chr5B.!!$F1 1476
16 TraesCS5D01G291600 chr5B 468840971 468844961 3990 False 939.166667 1585 94.683500 1 3846 6 chr5B.!!$F4 3845
17 TraesCS5D01G291600 chr5B 468902615 468904758 2143 False 546.620000 948 93.714200 1 1980 5 chr5B.!!$F5 1979
18 TraesCS5D01G291600 chr5B 468805345 468806698 1353 False 439.666667 861 84.211000 820 3676 3 chr5B.!!$F2 2856

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
211 217 0.174845 CGATACTTGGGCCGACTCAA 59.825 55.000 0.00 0.0 0.00 3.02 F
363 370 2.219674 CGGCTTGCAAACGCATTTTAAA 59.780 40.909 12.19 0.0 39.68 1.52 F
665 678 4.100498 TCCGATGTGTTTATTACTCCCTCC 59.900 45.833 0.00 0.0 0.00 4.30 F
1820 2887 3.765511 TCATTGTACAGCTACGTACCCTT 59.234 43.478 10.84 0.0 40.91 3.95 F
1829 2896 3.054508 AGCTACGTACCCTTACTCTCACT 60.055 47.826 0.00 0.0 0.00 3.41 F
1830 2897 3.693578 GCTACGTACCCTTACTCTCACTT 59.306 47.826 0.00 0.0 0.00 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1382 2396 0.609151 TTCAACGTTGATAGGCCCGA 59.391 50.000 30.10 11.18 37.00 5.14 R
1799 2866 3.795623 AGGGTACGTAGCTGTACAATG 57.204 47.619 22.84 0.00 45.16 2.82 R
1824 2891 4.771590 TTGGCTGCAGAAATAAAGTGAG 57.228 40.909 20.43 0.00 0.00 3.51 R
2746 3892 1.461127 CCTACAACGCAAGCAAGTCTC 59.539 52.381 0.00 0.00 45.62 3.36 R
2881 4132 1.616374 TCACGATGTTGTAGGCTGTGA 59.384 47.619 0.00 0.00 32.93 3.58 R
3357 4609 1.619827 CCTACCCACGAAGGTGTACAA 59.380 52.381 10.76 0.00 42.80 2.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
211 217 0.174845 CGATACTTGGGCCGACTCAA 59.825 55.000 0.00 0.00 0.00 3.02
363 370 2.219674 CGGCTTGCAAACGCATTTTAAA 59.780 40.909 12.19 0.00 39.68 1.52
599 612 8.868103 AGATTGCTAGAGTGATTGAGAATATCA 58.132 33.333 0.00 0.00 35.62 2.15
656 669 8.465999 TGCAATCTTTTATCCGATGTGTTTATT 58.534 29.630 0.00 0.00 0.00 1.40
657 670 9.944663 GCAATCTTTTATCCGATGTGTTTATTA 57.055 29.630 0.00 0.00 0.00 0.98
661 674 9.321562 TCTTTTATCCGATGTGTTTATTACTCC 57.678 33.333 0.00 0.00 0.00 3.85
662 675 8.441312 TTTTATCCGATGTGTTTATTACTCCC 57.559 34.615 0.00 0.00 0.00 4.30
663 676 5.888982 ATCCGATGTGTTTATTACTCCCT 57.111 39.130 0.00 0.00 0.00 4.20
664 677 5.272283 TCCGATGTGTTTATTACTCCCTC 57.728 43.478 0.00 0.00 0.00 4.30
665 678 4.100498 TCCGATGTGTTTATTACTCCCTCC 59.900 45.833 0.00 0.00 0.00 4.30
666 679 4.141801 CCGATGTGTTTATTACTCCCTCCA 60.142 45.833 0.00 0.00 0.00 3.86
667 680 5.454755 CCGATGTGTTTATTACTCCCTCCAT 60.455 44.000 0.00 0.00 0.00 3.41
668 681 6.055588 CGATGTGTTTATTACTCCCTCCATT 58.944 40.000 0.00 0.00 0.00 3.16
669 682 6.202954 CGATGTGTTTATTACTCCCTCCATTC 59.797 42.308 0.00 0.00 0.00 2.67
670 683 5.751586 TGTGTTTATTACTCCCTCCATTCC 58.248 41.667 0.00 0.00 0.00 3.01
671 684 5.251932 TGTGTTTATTACTCCCTCCATTCCA 59.748 40.000 0.00 0.00 0.00 3.53
672 685 6.184789 GTGTTTATTACTCCCTCCATTCCAA 58.815 40.000 0.00 0.00 0.00 3.53
673 686 6.661805 GTGTTTATTACTCCCTCCATTCCAAA 59.338 38.462 0.00 0.00 0.00 3.28
674 687 7.177744 GTGTTTATTACTCCCTCCATTCCAAAA 59.822 37.037 0.00 0.00 0.00 2.44
675 688 7.898636 TGTTTATTACTCCCTCCATTCCAAAAT 59.101 33.333 0.00 0.00 0.00 1.82
676 689 9.416284 GTTTATTACTCCCTCCATTCCAAAATA 57.584 33.333 0.00 0.00 0.00 1.40
677 690 9.640952 TTTATTACTCCCTCCATTCCAAAATAG 57.359 33.333 0.00 0.00 0.00 1.73
678 691 6.901615 TTACTCCCTCCATTCCAAAATAGA 57.098 37.500 0.00 0.00 0.00 1.98
679 692 7.465900 TTACTCCCTCCATTCCAAAATAGAT 57.534 36.000 0.00 0.00 0.00 1.98
680 693 5.699143 ACTCCCTCCATTCCAAAATAGATG 58.301 41.667 0.00 0.00 0.00 2.90
681 694 5.433051 ACTCCCTCCATTCCAAAATAGATGA 59.567 40.000 0.00 0.00 0.00 2.92
682 695 5.694995 TCCCTCCATTCCAAAATAGATGAC 58.305 41.667 0.00 0.00 0.00 3.06
683 696 4.829492 CCCTCCATTCCAAAATAGATGACC 59.171 45.833 0.00 0.00 0.00 4.02
684 697 4.829492 CCTCCATTCCAAAATAGATGACCC 59.171 45.833 0.00 0.00 0.00 4.46
685 698 5.448654 CTCCATTCCAAAATAGATGACCCA 58.551 41.667 0.00 0.00 0.00 4.51
686 699 5.836705 TCCATTCCAAAATAGATGACCCAA 58.163 37.500 0.00 0.00 0.00 4.12
687 700 6.259893 TCCATTCCAAAATAGATGACCCAAA 58.740 36.000 0.00 0.00 0.00 3.28
688 701 6.380846 TCCATTCCAAAATAGATGACCCAAAG 59.619 38.462 0.00 0.00 0.00 2.77
689 702 6.155049 CCATTCCAAAATAGATGACCCAAAGT 59.845 38.462 0.00 0.00 0.00 2.66
690 703 7.310609 CCATTCCAAAATAGATGACCCAAAGTT 60.311 37.037 0.00 0.00 0.00 2.66
691 704 8.748412 CATTCCAAAATAGATGACCCAAAGTTA 58.252 33.333 0.00 0.00 0.00 2.24
692 705 7.938140 TCCAAAATAGATGACCCAAAGTTAG 57.062 36.000 0.00 0.00 0.00 2.34
693 706 7.466804 TCCAAAATAGATGACCCAAAGTTAGT 58.533 34.615 0.00 0.00 0.00 2.24
694 707 8.607713 TCCAAAATAGATGACCCAAAGTTAGTA 58.392 33.333 0.00 0.00 0.00 1.82
695 708 8.674607 CCAAAATAGATGACCCAAAGTTAGTAC 58.325 37.037 0.00 0.00 0.00 2.73
696 709 9.226606 CAAAATAGATGACCCAAAGTTAGTACA 57.773 33.333 0.00 0.00 0.00 2.90
697 710 9.802039 AAAATAGATGACCCAAAGTTAGTACAA 57.198 29.630 0.00 0.00 0.00 2.41
698 711 9.802039 AAATAGATGACCCAAAGTTAGTACAAA 57.198 29.630 0.00 0.00 0.00 2.83
699 712 9.449719 AATAGATGACCCAAAGTTAGTACAAAG 57.550 33.333 0.00 0.00 0.00 2.77
700 713 6.838382 AGATGACCCAAAGTTAGTACAAAGT 58.162 36.000 0.00 0.00 0.00 2.66
701 714 7.287810 AGATGACCCAAAGTTAGTACAAAGTT 58.712 34.615 0.00 0.00 0.00 2.66
702 715 6.687081 TGACCCAAAGTTAGTACAAAGTTG 57.313 37.500 0.00 0.00 0.00 3.16
703 716 5.591067 TGACCCAAAGTTAGTACAAAGTTGG 59.409 40.000 0.00 2.24 0.00 3.77
704 717 4.891168 ACCCAAAGTTAGTACAAAGTTGGG 59.109 41.667 22.74 22.74 36.81 4.12
705 718 4.891168 CCCAAAGTTAGTACAAAGTTGGGT 59.109 41.667 18.93 0.00 32.79 4.51
706 719 5.009310 CCCAAAGTTAGTACAAAGTTGGGTC 59.991 44.000 18.93 0.00 32.79 4.46
707 720 5.591067 CCAAAGTTAGTACAAAGTTGGGTCA 59.409 40.000 0.00 0.00 30.84 4.02
708 721 6.264518 CCAAAGTTAGTACAAAGTTGGGTCAT 59.735 38.462 0.00 0.00 30.84 3.06
709 722 7.360361 CAAAGTTAGTACAAAGTTGGGTCATC 58.640 38.462 0.00 0.00 0.00 2.92
710 723 6.435292 AGTTAGTACAAAGTTGGGTCATCT 57.565 37.500 0.00 0.00 0.00 2.90
711 724 7.549147 AGTTAGTACAAAGTTGGGTCATCTA 57.451 36.000 0.00 0.00 0.00 1.98
712 725 8.147244 AGTTAGTACAAAGTTGGGTCATCTAT 57.853 34.615 0.00 0.00 0.00 1.98
713 726 8.603304 AGTTAGTACAAAGTTGGGTCATCTATT 58.397 33.333 0.00 0.00 0.00 1.73
714 727 9.227777 GTTAGTACAAAGTTGGGTCATCTATTT 57.772 33.333 0.00 0.00 0.00 1.40
715 728 9.802039 TTAGTACAAAGTTGGGTCATCTATTTT 57.198 29.630 0.00 0.00 0.00 1.82
716 729 8.110860 AGTACAAAGTTGGGTCATCTATTTTG 57.889 34.615 0.00 0.00 0.00 2.44
717 730 7.942341 AGTACAAAGTTGGGTCATCTATTTTGA 59.058 33.333 0.00 0.00 0.00 2.69
718 731 7.595819 ACAAAGTTGGGTCATCTATTTTGAA 57.404 32.000 0.00 0.00 0.00 2.69
719 732 8.017418 ACAAAGTTGGGTCATCTATTTTGAAA 57.983 30.769 0.00 0.00 0.00 2.69
720 733 7.926018 ACAAAGTTGGGTCATCTATTTTGAAAC 59.074 33.333 0.00 0.00 0.00 2.78
721 734 6.254281 AGTTGGGTCATCTATTTTGAAACG 57.746 37.500 0.00 0.00 0.00 3.60
722 735 5.183140 AGTTGGGTCATCTATTTTGAAACGG 59.817 40.000 0.00 0.00 0.00 4.44
723 736 4.912586 TGGGTCATCTATTTTGAAACGGA 58.087 39.130 0.00 0.00 0.00 4.69
724 737 4.941263 TGGGTCATCTATTTTGAAACGGAG 59.059 41.667 0.00 0.00 0.00 4.63
725 738 4.335594 GGGTCATCTATTTTGAAACGGAGG 59.664 45.833 0.00 0.00 0.00 4.30
726 739 4.335594 GGTCATCTATTTTGAAACGGAGGG 59.664 45.833 0.00 0.00 0.00 4.30
727 740 5.183228 GTCATCTATTTTGAAACGGAGGGA 58.817 41.667 0.00 0.00 0.00 4.20
728 741 5.294552 GTCATCTATTTTGAAACGGAGGGAG 59.705 44.000 0.00 0.00 0.00 4.30
810 823 5.132144 CCTACCACCCACTACCAGATATTTT 59.868 44.000 0.00 0.00 0.00 1.82
1148 1904 8.437274 AAAGGAAAGGTAGACTTAGATCTCAA 57.563 34.615 0.00 0.00 38.85 3.02
1150 1906 7.186268 AGGAAAGGTAGACTTAGATCTCAACT 58.814 38.462 0.00 0.00 38.85 3.16
1336 2092 4.819088 TCATTCAGATCGGACAAACACAAA 59.181 37.500 0.00 0.00 0.00 2.83
1799 2866 7.422399 CAGTAAGAAGCCTAGAACTCAGTATC 58.578 42.308 0.00 0.00 0.00 2.24
1820 2887 3.765511 TCATTGTACAGCTACGTACCCTT 59.234 43.478 10.84 0.00 40.91 3.95
1824 2891 3.941483 TGTACAGCTACGTACCCTTACTC 59.059 47.826 10.84 0.00 40.91 2.59
1825 2892 3.362870 ACAGCTACGTACCCTTACTCT 57.637 47.619 0.00 0.00 0.00 3.24
1827 2894 3.276857 CAGCTACGTACCCTTACTCTCA 58.723 50.000 0.00 0.00 0.00 3.27
1828 2895 3.065095 CAGCTACGTACCCTTACTCTCAC 59.935 52.174 0.00 0.00 0.00 3.51
1829 2896 3.054508 AGCTACGTACCCTTACTCTCACT 60.055 47.826 0.00 0.00 0.00 3.41
1830 2897 3.693578 GCTACGTACCCTTACTCTCACTT 59.306 47.826 0.00 0.00 0.00 3.16
1832 2899 5.355350 GCTACGTACCCTTACTCTCACTTTA 59.645 44.000 0.00 0.00 0.00 1.85
1936 3028 7.069702 TGTGTTGCAATAATGGTATCAATCCAT 59.930 33.333 0.59 0.00 46.20 3.41
2599 3741 9.548208 GTGCTGATTACTTGATTTCTCTTTTAC 57.452 33.333 0.00 0.00 0.00 2.01
2940 4191 7.030165 CCACATAGTACAGTTACACTTCTGAG 58.970 42.308 0.00 0.00 35.84 3.35
2949 4200 6.150641 ACAGTTACACTTCTGAGTTATCGCTA 59.849 38.462 0.00 0.00 32.54 4.26
3155 4407 7.278875 AGAGGTTTATCATGAGTTCAATCTCC 58.721 38.462 0.09 0.00 33.93 3.71
3296 4548 4.454678 TCTTTGTTTGTGTCATCAGCTCT 58.545 39.130 0.00 0.00 0.00 4.09
3326 4578 1.550524 CCTGTCACCTCGGAGATTTCA 59.449 52.381 6.58 0.29 33.89 2.69
3389 4641 1.810755 GTGGGTAGGCTTTACTTGTGC 59.189 52.381 0.00 0.00 0.00 4.57
3465 4719 7.281484 GTCGTCGGTATATTTTCTTTGCTATG 58.719 38.462 0.00 0.00 0.00 2.23
3685 4965 4.469657 AGGCCAAAGTTACAGATTCAACA 58.530 39.130 5.01 0.00 0.00 3.33
3693 4973 2.751166 ACAGATTCAACAGTCTCCCG 57.249 50.000 0.00 0.00 0.00 5.14
3726 5006 8.084684 AGAAGAGAAAACCAATGATAAAAGCAC 58.915 33.333 0.00 0.00 0.00 4.40
3735 5015 7.721402 ACCAATGATAAAAGCACACTGTAAAA 58.279 30.769 0.00 0.00 0.00 1.52
3736 5016 8.200792 ACCAATGATAAAAGCACACTGTAAAAA 58.799 29.630 0.00 0.00 0.00 1.94
3774 5287 4.491234 AAATTGTGGCATGCACATTTTG 57.509 36.364 25.16 0.00 35.87 2.44
3788 5302 4.749099 GCACATTTTGAACATGCTGGTTTA 59.251 37.500 0.00 0.00 33.44 2.01
3846 5360 4.286297 ACTAGTGCCTAGAATTGCAACA 57.714 40.909 0.00 0.00 39.57 3.33
3847 5361 4.651778 ACTAGTGCCTAGAATTGCAACAA 58.348 39.130 0.00 0.00 39.57 2.83
3848 5362 5.256474 ACTAGTGCCTAGAATTGCAACAAT 58.744 37.500 0.00 0.00 39.57 2.71
3849 5363 5.711976 ACTAGTGCCTAGAATTGCAACAATT 59.288 36.000 0.00 5.28 39.57 2.32
3850 5364 5.473066 AGTGCCTAGAATTGCAACAATTT 57.527 34.783 0.00 0.00 39.57 1.82
3851 5365 5.857268 AGTGCCTAGAATTGCAACAATTTT 58.143 33.333 0.00 4.49 39.57 1.82
3852 5366 6.290605 AGTGCCTAGAATTGCAACAATTTTT 58.709 32.000 0.00 0.00 39.57 1.94
3876 5390 0.404426 AAAAAGGAGGAAGACCCCCG 59.596 55.000 0.00 0.00 36.73 5.73
3877 5391 1.498176 AAAAGGAGGAAGACCCCCGG 61.498 60.000 0.00 0.00 36.73 5.73
3883 5397 3.787001 GAAGACCCCCGGCCTCTG 61.787 72.222 0.00 0.00 0.00 3.35
3889 5403 4.559063 CCCCGGCCTCTGCATCTG 62.559 72.222 0.00 0.00 40.13 2.90
3890 5404 4.559063 CCCGGCCTCTGCATCTGG 62.559 72.222 0.00 0.00 40.13 3.86
3891 5405 4.559063 CCGGCCTCTGCATCTGGG 62.559 72.222 0.00 0.00 40.13 4.45
3894 5408 4.166888 GCCTCTGCATCTGGGCGA 62.167 66.667 0.00 0.00 37.47 5.54
3895 5409 2.827423 CCTCTGCATCTGGGCGAT 59.173 61.111 0.00 0.00 36.28 4.58
3901 5415 2.643272 CATCTGGGCGATGCATGC 59.357 61.111 11.82 11.82 42.75 4.06
3902 5416 2.190841 CATCTGGGCGATGCATGCA 61.191 57.895 25.04 25.04 42.75 3.96
3903 5417 1.897137 ATCTGGGCGATGCATGCAG 60.897 57.895 26.69 14.50 0.00 4.41
3904 5418 4.266070 CTGGGCGATGCATGCAGC 62.266 66.667 25.69 25.69 45.96 5.25
3908 5422 3.515286 GCGATGCATGCAGCCACT 61.515 61.111 28.76 10.64 44.83 4.00
3909 5423 3.060020 GCGATGCATGCAGCCACTT 62.060 57.895 28.76 9.83 44.83 3.16
3910 5424 1.509463 CGATGCATGCAGCCACTTT 59.491 52.632 28.76 9.02 44.83 2.66
3911 5425 0.734309 CGATGCATGCAGCCACTTTA 59.266 50.000 28.76 0.09 44.83 1.85
3912 5426 1.335810 CGATGCATGCAGCCACTTTAT 59.664 47.619 28.76 7.39 44.83 1.40
3913 5427 2.223641 CGATGCATGCAGCCACTTTATT 60.224 45.455 28.76 6.59 44.83 1.40
3914 5428 3.003585 CGATGCATGCAGCCACTTTATTA 59.996 43.478 28.76 0.00 44.83 0.98
3915 5429 4.497842 CGATGCATGCAGCCACTTTATTAA 60.498 41.667 28.76 0.00 44.83 1.40
3916 5430 5.535333 GATGCATGCAGCCACTTTATTAAT 58.465 37.500 25.21 2.11 44.83 1.40
3917 5431 5.341872 TGCATGCAGCCACTTTATTAATT 57.658 34.783 18.46 0.00 44.83 1.40
3918 5432 6.462552 TGCATGCAGCCACTTTATTAATTA 57.537 33.333 18.46 0.00 44.83 1.40
3919 5433 7.053316 TGCATGCAGCCACTTTATTAATTAT 57.947 32.000 18.46 0.00 44.83 1.28
3920 5434 7.499292 TGCATGCAGCCACTTTATTAATTATT 58.501 30.769 18.46 0.00 44.83 1.40
3921 5435 7.652909 TGCATGCAGCCACTTTATTAATTATTC 59.347 33.333 18.46 0.00 44.83 1.75
3922 5436 7.652909 GCATGCAGCCACTTTATTAATTATTCA 59.347 33.333 14.21 0.00 37.23 2.57
3923 5437 8.971321 CATGCAGCCACTTTATTAATTATTCAC 58.029 33.333 0.00 0.00 0.00 3.18
3924 5438 8.060931 TGCAGCCACTTTATTAATTATTCACA 57.939 30.769 0.00 0.00 0.00 3.58
3925 5439 8.526978 TGCAGCCACTTTATTAATTATTCACAA 58.473 29.630 0.00 0.00 0.00 3.33
3926 5440 9.364989 GCAGCCACTTTATTAATTATTCACAAA 57.635 29.630 0.00 0.00 0.00 2.83
3959 5473 8.958119 ACAAAGAAATACAACAGTAAGTCTGA 57.042 30.769 1.79 0.00 46.27 3.27
3960 5474 9.391006 ACAAAGAAATACAACAGTAAGTCTGAA 57.609 29.630 1.79 0.00 46.27 3.02
3961 5475 9.869844 CAAAGAAATACAACAGTAAGTCTGAAG 57.130 33.333 1.79 0.00 46.27 3.02
3962 5476 7.659652 AGAAATACAACAGTAAGTCTGAAGC 57.340 36.000 1.79 0.00 46.27 3.86
3963 5477 6.651225 AGAAATACAACAGTAAGTCTGAAGCC 59.349 38.462 1.79 0.00 46.27 4.35
3964 5478 3.838244 ACAACAGTAAGTCTGAAGCCA 57.162 42.857 1.79 0.00 46.27 4.75
3965 5479 3.467803 ACAACAGTAAGTCTGAAGCCAC 58.532 45.455 1.79 0.00 46.27 5.01
3966 5480 2.808543 CAACAGTAAGTCTGAAGCCACC 59.191 50.000 1.79 0.00 46.27 4.61
3967 5481 1.000955 ACAGTAAGTCTGAAGCCACCG 59.999 52.381 1.79 0.00 46.27 4.94
3968 5482 1.000955 CAGTAAGTCTGAAGCCACCGT 59.999 52.381 0.00 0.00 46.27 4.83
3969 5483 1.272769 AGTAAGTCTGAAGCCACCGTC 59.727 52.381 0.00 0.00 0.00 4.79
3970 5484 1.272769 GTAAGTCTGAAGCCACCGTCT 59.727 52.381 0.00 0.00 0.00 4.18
3971 5485 1.629043 AAGTCTGAAGCCACCGTCTA 58.371 50.000 0.00 0.00 0.00 2.59
3972 5486 1.178276 AGTCTGAAGCCACCGTCTAG 58.822 55.000 0.00 0.00 0.00 2.43
3980 5494 3.065575 CCACCGTCTAGGCAACATC 57.934 57.895 0.00 0.00 46.52 3.06
3981 5495 0.537188 CCACCGTCTAGGCAACATCT 59.463 55.000 0.00 0.00 46.52 2.90
3982 5496 1.754803 CCACCGTCTAGGCAACATCTA 59.245 52.381 0.00 0.00 46.52 1.98
3983 5497 2.365617 CCACCGTCTAGGCAACATCTAT 59.634 50.000 0.00 0.00 46.52 1.98
3984 5498 3.553096 CCACCGTCTAGGCAACATCTATC 60.553 52.174 0.00 0.00 46.52 2.08
3985 5499 2.293677 ACCGTCTAGGCAACATCTATCG 59.706 50.000 0.00 0.00 46.52 2.92
3986 5500 2.320367 CGTCTAGGCAACATCTATCGC 58.680 52.381 0.00 0.00 41.41 4.58
3987 5501 2.030717 CGTCTAGGCAACATCTATCGCT 60.031 50.000 0.00 0.00 41.41 4.93
3988 5502 3.188667 CGTCTAGGCAACATCTATCGCTA 59.811 47.826 0.00 0.00 41.41 4.26
3989 5503 4.477780 GTCTAGGCAACATCTATCGCTAC 58.522 47.826 0.00 0.00 41.41 3.58
3990 5504 4.216687 GTCTAGGCAACATCTATCGCTACT 59.783 45.833 0.00 0.00 41.41 2.57
3991 5505 3.651803 AGGCAACATCTATCGCTACTC 57.348 47.619 0.00 0.00 41.41 2.59
3992 5506 2.959030 AGGCAACATCTATCGCTACTCA 59.041 45.455 0.00 0.00 41.41 3.41
3993 5507 3.576118 AGGCAACATCTATCGCTACTCAT 59.424 43.478 0.00 0.00 41.41 2.90
3994 5508 4.767409 AGGCAACATCTATCGCTACTCATA 59.233 41.667 0.00 0.00 41.41 2.15
3995 5509 5.420421 AGGCAACATCTATCGCTACTCATAT 59.580 40.000 0.00 0.00 41.41 1.78
3996 5510 5.746245 GGCAACATCTATCGCTACTCATATC 59.254 44.000 0.00 0.00 0.00 1.63
3997 5511 5.746245 GCAACATCTATCGCTACTCATATCC 59.254 44.000 0.00 0.00 0.00 2.59
3998 5512 6.625960 GCAACATCTATCGCTACTCATATCCA 60.626 42.308 0.00 0.00 0.00 3.41
3999 5513 6.691754 ACATCTATCGCTACTCATATCCAG 57.308 41.667 0.00 0.00 0.00 3.86
4000 5514 6.418946 ACATCTATCGCTACTCATATCCAGA 58.581 40.000 0.00 0.00 0.00 3.86
4001 5515 7.059788 ACATCTATCGCTACTCATATCCAGAT 58.940 38.462 0.00 0.00 0.00 2.90
4002 5516 6.934048 TCTATCGCTACTCATATCCAGATG 57.066 41.667 0.00 0.00 0.00 2.90
4003 5517 6.653989 TCTATCGCTACTCATATCCAGATGA 58.346 40.000 0.00 0.00 34.64 2.92
4004 5518 7.286313 TCTATCGCTACTCATATCCAGATGAT 58.714 38.462 0.00 0.00 35.32 2.45
4005 5519 5.573337 TCGCTACTCATATCCAGATGATG 57.427 43.478 0.00 0.00 35.32 3.07
4006 5520 5.256474 TCGCTACTCATATCCAGATGATGA 58.744 41.667 0.00 0.00 35.32 2.92
4007 5521 5.711976 TCGCTACTCATATCCAGATGATGAA 59.288 40.000 0.00 0.00 35.32 2.57
4008 5522 6.035217 CGCTACTCATATCCAGATGATGAAG 58.965 44.000 0.00 0.00 35.32 3.02
4009 5523 6.339730 GCTACTCATATCCAGATGATGAAGG 58.660 44.000 0.00 0.00 35.32 3.46
4010 5524 6.154192 GCTACTCATATCCAGATGATGAAGGA 59.846 42.308 0.00 0.00 35.32 3.36
4011 5525 7.147689 GCTACTCATATCCAGATGATGAAGGAT 60.148 40.741 0.00 0.00 43.07 3.24
4012 5526 6.948589 ACTCATATCCAGATGATGAAGGATG 58.051 40.000 0.00 0.00 40.86 3.51
4013 5527 5.742063 TCATATCCAGATGATGAAGGATGC 58.258 41.667 0.00 0.00 40.86 3.91
4014 5528 5.487845 TCATATCCAGATGATGAAGGATGCT 59.512 40.000 0.00 0.00 40.86 3.79
4015 5529 3.487120 TCCAGATGATGAAGGATGCTG 57.513 47.619 0.00 0.00 0.00 4.41
4016 5530 3.043418 TCCAGATGATGAAGGATGCTGA 58.957 45.455 0.00 0.00 0.00 4.26
4017 5531 3.651423 TCCAGATGATGAAGGATGCTGAT 59.349 43.478 0.00 0.00 0.00 2.90
4018 5532 4.842380 TCCAGATGATGAAGGATGCTGATA 59.158 41.667 0.00 0.00 0.00 2.15
4019 5533 5.046520 TCCAGATGATGAAGGATGCTGATAG 60.047 44.000 0.00 0.00 0.00 2.08
4020 5534 5.280062 CCAGATGATGAAGGATGCTGATAGT 60.280 44.000 0.00 0.00 0.00 2.12
4021 5535 5.870433 CAGATGATGAAGGATGCTGATAGTC 59.130 44.000 0.00 0.00 0.00 2.59
4022 5536 4.613925 TGATGAAGGATGCTGATAGTCC 57.386 45.455 0.00 0.00 0.00 3.85
4023 5537 3.006217 TGATGAAGGATGCTGATAGTCCG 59.994 47.826 0.00 0.00 37.12 4.79
4024 5538 1.688735 TGAAGGATGCTGATAGTCCGG 59.311 52.381 0.00 0.00 37.12 5.14
4025 5539 1.001406 GAAGGATGCTGATAGTCCGGG 59.999 57.143 0.00 0.00 37.12 5.73
4026 5540 1.004440 GGATGCTGATAGTCCGGGC 60.004 63.158 0.00 0.00 0.00 6.13
4027 5541 1.004440 GATGCTGATAGTCCGGGCC 60.004 63.158 0.08 0.00 0.00 5.80
4028 5542 1.460305 ATGCTGATAGTCCGGGCCT 60.460 57.895 0.08 0.16 0.00 5.19
4029 5543 0.178932 ATGCTGATAGTCCGGGCCTA 60.179 55.000 0.08 2.94 0.00 3.93
4030 5544 0.397957 TGCTGATAGTCCGGGCCTAA 60.398 55.000 0.08 0.00 0.00 2.69
4031 5545 0.977395 GCTGATAGTCCGGGCCTAAT 59.023 55.000 0.08 0.00 0.00 1.73
4032 5546 2.176889 GCTGATAGTCCGGGCCTAATA 58.823 52.381 0.08 0.00 0.00 0.98
4033 5547 2.094130 GCTGATAGTCCGGGCCTAATAC 60.094 54.545 0.08 0.00 0.00 1.89
4034 5548 2.496470 CTGATAGTCCGGGCCTAATACC 59.504 54.545 0.08 0.00 0.00 2.73
4035 5549 2.158279 TGATAGTCCGGGCCTAATACCA 60.158 50.000 0.08 0.00 0.00 3.25
4036 5550 1.708341 TAGTCCGGGCCTAATACCAC 58.292 55.000 0.08 0.00 0.00 4.16
4037 5551 0.325860 AGTCCGGGCCTAATACCACA 60.326 55.000 0.08 0.00 0.00 4.17
4038 5552 0.106149 GTCCGGGCCTAATACCACAG 59.894 60.000 0.84 0.00 0.00 3.66
4039 5553 0.031917 TCCGGGCCTAATACCACAGA 60.032 55.000 0.84 0.00 0.00 3.41
4040 5554 0.106149 CCGGGCCTAATACCACAGAC 59.894 60.000 0.84 0.00 0.00 3.51
4041 5555 0.106149 CGGGCCTAATACCACAGACC 59.894 60.000 0.84 0.00 0.00 3.85
4042 5556 1.508256 GGGCCTAATACCACAGACCT 58.492 55.000 0.84 0.00 0.00 3.85
4043 5557 1.416772 GGGCCTAATACCACAGACCTC 59.583 57.143 0.84 0.00 0.00 3.85
4044 5558 1.068741 GGCCTAATACCACAGACCTCG 59.931 57.143 0.00 0.00 0.00 4.63
4045 5559 1.538419 GCCTAATACCACAGACCTCGC 60.538 57.143 0.00 0.00 0.00 5.03
4046 5560 1.754803 CCTAATACCACAGACCTCGCA 59.245 52.381 0.00 0.00 0.00 5.10
4047 5561 2.223829 CCTAATACCACAGACCTCGCAG 60.224 54.545 0.00 0.00 0.00 5.18
4048 5562 1.267121 AATACCACAGACCTCGCAGT 58.733 50.000 0.00 0.00 0.00 4.40
4049 5563 0.818296 ATACCACAGACCTCGCAGTC 59.182 55.000 0.00 0.00 37.01 3.51
4050 5564 0.538746 TACCACAGACCTCGCAGTCA 60.539 55.000 7.30 0.00 39.34 3.41
4051 5565 1.367471 CCACAGACCTCGCAGTCAA 59.633 57.895 7.30 0.00 39.34 3.18
4052 5566 0.668706 CCACAGACCTCGCAGTCAAG 60.669 60.000 7.30 2.62 39.34 3.02
4053 5567 1.005630 ACAGACCTCGCAGTCAAGC 60.006 57.895 7.30 0.00 39.34 4.01
4054 5568 1.739562 CAGACCTCGCAGTCAAGCC 60.740 63.158 7.30 0.00 39.34 4.35
4055 5569 1.910772 AGACCTCGCAGTCAAGCCT 60.911 57.895 7.30 0.00 39.34 4.58
4056 5570 0.612174 AGACCTCGCAGTCAAGCCTA 60.612 55.000 7.30 0.00 39.34 3.93
4057 5571 0.246635 GACCTCGCAGTCAAGCCTAA 59.753 55.000 0.36 0.00 36.73 2.69
4058 5572 0.037232 ACCTCGCAGTCAAGCCTAAC 60.037 55.000 0.00 0.00 0.00 2.34
4059 5573 0.037326 CCTCGCAGTCAAGCCTAACA 60.037 55.000 0.00 0.00 0.00 2.41
4060 5574 1.406069 CCTCGCAGTCAAGCCTAACAT 60.406 52.381 0.00 0.00 0.00 2.71
4061 5575 1.929836 CTCGCAGTCAAGCCTAACATC 59.070 52.381 0.00 0.00 0.00 3.06
4062 5576 1.550524 TCGCAGTCAAGCCTAACATCT 59.449 47.619 0.00 0.00 0.00 2.90
4063 5577 2.758423 TCGCAGTCAAGCCTAACATCTA 59.242 45.455 0.00 0.00 0.00 1.98
4064 5578 3.194755 TCGCAGTCAAGCCTAACATCTAA 59.805 43.478 0.00 0.00 0.00 2.10
4065 5579 3.553511 CGCAGTCAAGCCTAACATCTAAG 59.446 47.826 0.00 0.00 0.00 2.18
4066 5580 4.678044 CGCAGTCAAGCCTAACATCTAAGA 60.678 45.833 0.00 0.00 0.00 2.10
4067 5581 5.363939 GCAGTCAAGCCTAACATCTAAGAT 58.636 41.667 0.00 0.00 0.00 2.40
4068 5582 5.465056 GCAGTCAAGCCTAACATCTAAGATC 59.535 44.000 0.00 0.00 0.00 2.75
4069 5583 6.685116 GCAGTCAAGCCTAACATCTAAGATCT 60.685 42.308 0.00 0.00 0.00 2.75
4070 5584 6.700960 CAGTCAAGCCTAACATCTAAGATCTG 59.299 42.308 0.00 0.00 0.00 2.90
4071 5585 6.609212 AGTCAAGCCTAACATCTAAGATCTGA 59.391 38.462 0.00 0.00 0.00 3.27
4072 5586 6.922957 GTCAAGCCTAACATCTAAGATCTGAG 59.077 42.308 0.00 0.00 0.00 3.35
4073 5587 6.041409 TCAAGCCTAACATCTAAGATCTGAGG 59.959 42.308 7.28 0.23 0.00 3.86
4074 5588 4.283212 AGCCTAACATCTAAGATCTGAGGC 59.717 45.833 7.28 9.80 45.91 4.70
4075 5589 4.562552 GCCTAACATCTAAGATCTGAGGCC 60.563 50.000 7.28 0.00 40.89 5.19
4076 5590 4.020662 CCTAACATCTAAGATCTGAGGCCC 60.021 50.000 7.28 0.00 0.00 5.80
4077 5591 2.334023 ACATCTAAGATCTGAGGCCCC 58.666 52.381 7.28 0.00 0.00 5.80
4078 5592 2.333069 CATCTAAGATCTGAGGCCCCA 58.667 52.381 7.28 0.00 0.00 4.96
4079 5593 2.568546 TCTAAGATCTGAGGCCCCAA 57.431 50.000 7.28 0.00 0.00 4.12
4080 5594 2.119495 TCTAAGATCTGAGGCCCCAAC 58.881 52.381 7.28 0.00 0.00 3.77
4081 5595 1.141858 CTAAGATCTGAGGCCCCAACC 59.858 57.143 0.00 0.00 0.00 3.77
4082 5596 0.551131 AAGATCTGAGGCCCCAACCT 60.551 55.000 0.00 0.00 45.04 3.50
4083 5597 0.343372 AGATCTGAGGCCCCAACCTA 59.657 55.000 0.00 0.00 41.32 3.08
4084 5598 0.761802 GATCTGAGGCCCCAACCTAG 59.238 60.000 0.00 0.00 41.32 3.02
4085 5599 1.348775 ATCTGAGGCCCCAACCTAGC 61.349 60.000 0.00 0.00 41.32 3.42
4089 5603 3.339093 GGCCCCAACCTAGCCACT 61.339 66.667 0.00 0.00 46.34 4.00
4090 5604 2.763902 GCCCCAACCTAGCCACTT 59.236 61.111 0.00 0.00 0.00 3.16
4091 5605 1.678970 GCCCCAACCTAGCCACTTG 60.679 63.158 0.00 0.00 0.00 3.16
4092 5606 1.678970 CCCCAACCTAGCCACTTGC 60.679 63.158 0.00 0.00 41.71 4.01
4093 5607 1.678970 CCCAACCTAGCCACTTGCC 60.679 63.158 0.00 0.00 42.71 4.52
4094 5608 1.074775 CCAACCTAGCCACTTGCCA 59.925 57.895 0.00 0.00 42.71 4.92
4095 5609 0.962356 CCAACCTAGCCACTTGCCAG 60.962 60.000 0.00 0.00 42.71 4.85
4097 5611 3.081554 CCTAGCCACTTGCCAGGT 58.918 61.111 0.00 0.00 43.20 4.00
4098 5612 1.078143 CCTAGCCACTTGCCAGGTC 60.078 63.158 0.00 0.00 43.20 3.85
4099 5613 1.557269 CCTAGCCACTTGCCAGGTCT 61.557 60.000 0.00 0.00 43.20 3.85
4100 5614 0.392193 CTAGCCACTTGCCAGGTCTG 60.392 60.000 0.00 0.00 42.71 3.51
4109 5623 3.569210 CCAGGTCTGGGGCACACA 61.569 66.667 9.08 0.00 46.81 3.72
4110 5624 2.281761 CAGGTCTGGGGCACACAC 60.282 66.667 0.00 0.00 0.00 3.82
4111 5625 3.570212 AGGTCTGGGGCACACACC 61.570 66.667 5.99 5.99 38.33 4.16
4156 5670 4.954970 CCACCAACTGCCACCGCT 62.955 66.667 0.00 0.00 35.36 5.52
4157 5671 3.357079 CACCAACTGCCACCGCTC 61.357 66.667 0.00 0.00 35.36 5.03
4158 5672 4.643387 ACCAACTGCCACCGCTCC 62.643 66.667 0.00 0.00 35.36 4.70
4159 5673 4.641645 CCAACTGCCACCGCTCCA 62.642 66.667 0.00 0.00 35.36 3.86
4160 5674 2.360350 CAACTGCCACCGCTCCAT 60.360 61.111 0.00 0.00 35.36 3.41
4161 5675 2.045926 AACTGCCACCGCTCCATC 60.046 61.111 0.00 0.00 35.36 3.51
4162 5676 2.596851 AACTGCCACCGCTCCATCT 61.597 57.895 0.00 0.00 35.36 2.90
4163 5677 2.129555 AACTGCCACCGCTCCATCTT 62.130 55.000 0.00 0.00 35.36 2.40
4164 5678 1.817099 CTGCCACCGCTCCATCTTC 60.817 63.158 0.00 0.00 35.36 2.87
4165 5679 2.268920 GCCACCGCTCCATCTTCA 59.731 61.111 0.00 0.00 0.00 3.02
4166 5680 1.817099 GCCACCGCTCCATCTTCAG 60.817 63.158 0.00 0.00 0.00 3.02
4167 5681 1.900351 CCACCGCTCCATCTTCAGA 59.100 57.895 0.00 0.00 0.00 3.27
4168 5682 0.179089 CCACCGCTCCATCTTCAGAG 60.179 60.000 0.00 0.00 0.00 3.35
4169 5683 0.534412 CACCGCTCCATCTTCAGAGT 59.466 55.000 0.00 0.00 32.47 3.24
4170 5684 1.066573 CACCGCTCCATCTTCAGAGTT 60.067 52.381 0.00 0.00 32.47 3.01
4171 5685 1.066573 ACCGCTCCATCTTCAGAGTTG 60.067 52.381 0.00 0.00 32.47 3.16
4172 5686 1.066573 CCGCTCCATCTTCAGAGTTGT 60.067 52.381 0.00 0.00 32.47 3.32
4173 5687 2.166459 CCGCTCCATCTTCAGAGTTGTA 59.834 50.000 0.00 0.00 32.47 2.41
4174 5688 3.182967 CGCTCCATCTTCAGAGTTGTAC 58.817 50.000 0.00 0.00 32.47 2.90
4175 5689 3.119316 CGCTCCATCTTCAGAGTTGTACT 60.119 47.826 0.00 0.00 32.47 2.73
4176 5690 4.180057 GCTCCATCTTCAGAGTTGTACTG 58.820 47.826 0.00 0.00 36.80 2.74
4177 5691 4.753233 CTCCATCTTCAGAGTTGTACTGG 58.247 47.826 0.00 0.00 36.22 4.00
4178 5692 3.055819 TCCATCTTCAGAGTTGTACTGGC 60.056 47.826 0.00 0.00 36.22 4.85
4179 5693 2.724977 TCTTCAGAGTTGTACTGGCG 57.275 50.000 0.00 0.00 36.22 5.69
4180 5694 1.071605 CTTCAGAGTTGTACTGGCGC 58.928 55.000 0.00 0.00 36.22 6.53
4181 5695 0.391228 TTCAGAGTTGTACTGGCGCA 59.609 50.000 10.83 0.00 36.22 6.09
4182 5696 0.608130 TCAGAGTTGTACTGGCGCAT 59.392 50.000 10.83 0.00 36.22 4.73
4183 5697 1.002366 CAGAGTTGTACTGGCGCATC 58.998 55.000 10.83 0.00 0.00 3.91
4184 5698 0.608130 AGAGTTGTACTGGCGCATCA 59.392 50.000 10.83 0.00 0.00 3.07
4185 5699 1.001974 AGAGTTGTACTGGCGCATCAA 59.998 47.619 10.83 3.79 0.00 2.57
4186 5700 1.128692 GAGTTGTACTGGCGCATCAAC 59.871 52.381 10.83 15.51 38.69 3.18
4187 5701 1.156736 GTTGTACTGGCGCATCAACT 58.843 50.000 10.83 0.00 36.49 3.16
4188 5702 1.535462 GTTGTACTGGCGCATCAACTT 59.465 47.619 10.83 0.00 36.49 2.66
4189 5703 1.890876 TGTACTGGCGCATCAACTTT 58.109 45.000 10.83 0.00 0.00 2.66
4190 5704 1.535028 TGTACTGGCGCATCAACTTTG 59.465 47.619 10.83 0.00 0.00 2.77
4191 5705 0.521291 TACTGGCGCATCAACTTTGC 59.479 50.000 10.83 0.00 36.74 3.68
4192 5706 1.174712 ACTGGCGCATCAACTTTGCT 61.175 50.000 10.83 0.00 37.96 3.91
4193 5707 0.455633 CTGGCGCATCAACTTTGCTC 60.456 55.000 10.83 0.00 37.96 4.26
4194 5708 1.512734 GGCGCATCAACTTTGCTCG 60.513 57.895 10.83 0.00 37.96 5.03
4195 5709 1.497278 GCGCATCAACTTTGCTCGA 59.503 52.632 0.30 0.00 37.96 4.04
4196 5710 0.097674 GCGCATCAACTTTGCTCGAT 59.902 50.000 0.30 0.00 37.96 3.59
4197 5711 1.853646 GCGCATCAACTTTGCTCGATC 60.854 52.381 0.30 0.00 37.96 3.69
4198 5712 1.662629 CGCATCAACTTTGCTCGATCT 59.337 47.619 0.00 0.00 37.96 2.75
4199 5713 2.860136 CGCATCAACTTTGCTCGATCTA 59.140 45.455 0.00 0.00 37.96 1.98
4200 5714 3.060674 CGCATCAACTTTGCTCGATCTAG 60.061 47.826 0.00 0.00 37.96 2.43
4201 5715 3.303001 GCATCAACTTTGCTCGATCTAGC 60.303 47.826 12.15 12.15 43.08 3.42
4202 5716 3.876274 TCAACTTTGCTCGATCTAGCT 57.124 42.857 18.92 0.00 43.19 3.32
4203 5717 3.515630 TCAACTTTGCTCGATCTAGCTG 58.484 45.455 18.92 9.40 43.19 4.24
4204 5718 3.056536 TCAACTTTGCTCGATCTAGCTGT 60.057 43.478 18.92 12.31 43.19 4.40
4205 5719 3.157932 ACTTTGCTCGATCTAGCTGTC 57.842 47.619 18.92 0.00 43.19 3.51
4206 5720 2.115595 CTTTGCTCGATCTAGCTGTCG 58.884 52.381 18.92 10.55 43.19 4.35
4207 5721 1.095600 TTGCTCGATCTAGCTGTCGT 58.904 50.000 18.92 0.00 43.19 4.34
4208 5722 0.658368 TGCTCGATCTAGCTGTCGTC 59.342 55.000 18.92 10.08 43.19 4.20
4209 5723 0.383737 GCTCGATCTAGCTGTCGTCG 60.384 60.000 11.80 10.69 39.50 5.12
4210 5724 1.209998 CTCGATCTAGCTGTCGTCGA 58.790 55.000 14.72 13.59 38.79 4.20
4211 5725 0.928922 TCGATCTAGCTGTCGTCGAC 59.071 55.000 18.51 18.51 36.52 4.20
4212 5726 0.382030 CGATCTAGCTGTCGTCGACG 60.382 60.000 31.30 31.30 41.45 5.12
4213 5727 0.655048 GATCTAGCTGTCGTCGACGC 60.655 60.000 32.19 25.53 39.60 5.19
4214 5728 2.049475 ATCTAGCTGTCGTCGACGCC 62.049 60.000 32.19 23.24 39.60 5.68
4215 5729 3.035576 CTAGCTGTCGTCGACGCCA 62.036 63.158 32.19 26.78 39.60 5.69
4216 5730 3.318539 TAGCTGTCGTCGACGCCAC 62.319 63.158 32.19 25.22 39.60 5.01
4218 5732 4.337060 CTGTCGTCGACGCCACCA 62.337 66.667 32.19 22.11 39.60 4.17
4219 5733 4.634133 TGTCGTCGACGCCACCAC 62.634 66.667 32.19 23.81 39.60 4.16
4243 5757 3.953775 CAACGGCACCACCTCCCT 61.954 66.667 0.00 0.00 35.61 4.20
4244 5758 3.953775 AACGGCACCACCTCCCTG 61.954 66.667 0.00 0.00 35.61 4.45
4258 5772 4.724697 CCTGCGCGCGAACAGTTG 62.725 66.667 37.18 15.77 31.76 3.16
4259 5773 3.701530 CTGCGCGCGAACAGTTGA 61.702 61.111 37.18 3.91 0.00 3.18
4260 5774 3.620187 CTGCGCGCGAACAGTTGAG 62.620 63.158 37.18 10.94 0.00 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
185 191 1.742411 CGGCCCAAGTATCGTCAATGT 60.742 52.381 0.00 0.00 0.00 2.71
407 415 6.303839 TGAAGGTAGACTACTTTTTGGCAAT 58.696 36.000 10.95 0.00 0.00 3.56
548 561 9.815936 CTTTGGAAAGAACATAATTTCATTTGC 57.184 29.630 0.00 0.00 38.28 3.68
622 635 9.299963 CATCGGATAAAAGATTGCACATAAAAA 57.700 29.630 0.00 0.00 0.00 1.94
656 669 6.619437 TCATCTATTTTGGAATGGAGGGAGTA 59.381 38.462 0.00 0.00 36.39 2.59
657 670 5.433051 TCATCTATTTTGGAATGGAGGGAGT 59.567 40.000 0.00 0.00 36.39 3.85
658 671 5.767168 GTCATCTATTTTGGAATGGAGGGAG 59.233 44.000 0.00 0.00 36.39 4.30
659 672 5.399038 GGTCATCTATTTTGGAATGGAGGGA 60.399 44.000 0.00 0.00 36.39 4.20
660 673 4.829492 GGTCATCTATTTTGGAATGGAGGG 59.171 45.833 0.00 0.00 36.39 4.30
661 674 4.829492 GGGTCATCTATTTTGGAATGGAGG 59.171 45.833 0.00 0.00 36.39 4.30
662 675 5.448654 TGGGTCATCTATTTTGGAATGGAG 58.551 41.667 0.00 0.00 36.39 3.86
663 676 5.464588 TGGGTCATCTATTTTGGAATGGA 57.535 39.130 0.00 0.00 37.20 3.41
664 677 6.155049 ACTTTGGGTCATCTATTTTGGAATGG 59.845 38.462 0.00 0.00 0.00 3.16
665 678 7.174107 ACTTTGGGTCATCTATTTTGGAATG 57.826 36.000 0.00 0.00 0.00 2.67
666 679 7.797121 AACTTTGGGTCATCTATTTTGGAAT 57.203 32.000 0.00 0.00 0.00 3.01
667 680 7.947890 ACTAACTTTGGGTCATCTATTTTGGAA 59.052 33.333 0.00 0.00 0.00 3.53
668 681 7.466804 ACTAACTTTGGGTCATCTATTTTGGA 58.533 34.615 0.00 0.00 0.00 3.53
669 682 7.703058 ACTAACTTTGGGTCATCTATTTTGG 57.297 36.000 0.00 0.00 0.00 3.28
670 683 9.226606 TGTACTAACTTTGGGTCATCTATTTTG 57.773 33.333 0.00 0.00 0.00 2.44
671 684 9.802039 TTGTACTAACTTTGGGTCATCTATTTT 57.198 29.630 0.00 0.00 0.00 1.82
672 685 9.802039 TTTGTACTAACTTTGGGTCATCTATTT 57.198 29.630 0.00 0.00 0.00 1.40
673 686 9.449719 CTTTGTACTAACTTTGGGTCATCTATT 57.550 33.333 0.00 0.00 0.00 1.73
674 687 8.603304 ACTTTGTACTAACTTTGGGTCATCTAT 58.397 33.333 0.00 0.00 0.00 1.98
675 688 7.970102 ACTTTGTACTAACTTTGGGTCATCTA 58.030 34.615 0.00 0.00 0.00 1.98
676 689 6.838382 ACTTTGTACTAACTTTGGGTCATCT 58.162 36.000 0.00 0.00 0.00 2.90
677 690 7.360361 CAACTTTGTACTAACTTTGGGTCATC 58.640 38.462 0.00 0.00 0.00 2.92
678 691 6.264518 CCAACTTTGTACTAACTTTGGGTCAT 59.735 38.462 13.63 0.00 0.00 3.06
679 692 5.591067 CCAACTTTGTACTAACTTTGGGTCA 59.409 40.000 13.63 0.00 0.00 4.02
680 693 5.009310 CCCAACTTTGTACTAACTTTGGGTC 59.991 44.000 23.40 0.00 44.56 4.46
681 694 4.891168 CCCAACTTTGTACTAACTTTGGGT 59.109 41.667 23.40 4.76 44.56 4.51
682 695 5.447624 CCCAACTTTGTACTAACTTTGGG 57.552 43.478 20.79 20.79 44.30 4.12
683 696 5.591067 TGACCCAACTTTGTACTAACTTTGG 59.409 40.000 14.15 14.15 33.25 3.28
684 697 6.687081 TGACCCAACTTTGTACTAACTTTG 57.313 37.500 0.00 0.00 0.00 2.77
685 698 7.287810 AGATGACCCAACTTTGTACTAACTTT 58.712 34.615 0.00 0.00 0.00 2.66
686 699 6.838382 AGATGACCCAACTTTGTACTAACTT 58.162 36.000 0.00 0.00 0.00 2.66
687 700 6.435292 AGATGACCCAACTTTGTACTAACT 57.565 37.500 0.00 0.00 0.00 2.24
688 701 8.788325 AATAGATGACCCAACTTTGTACTAAC 57.212 34.615 0.00 0.00 0.00 2.34
689 702 9.802039 AAAATAGATGACCCAACTTTGTACTAA 57.198 29.630 0.00 0.00 0.00 2.24
690 703 9.226606 CAAAATAGATGACCCAACTTTGTACTA 57.773 33.333 0.00 0.00 0.00 1.82
691 704 7.942341 TCAAAATAGATGACCCAACTTTGTACT 59.058 33.333 0.00 0.00 0.00 2.73
692 705 8.106247 TCAAAATAGATGACCCAACTTTGTAC 57.894 34.615 0.00 0.00 0.00 2.90
693 706 8.698973 TTCAAAATAGATGACCCAACTTTGTA 57.301 30.769 0.00 0.00 0.00 2.41
694 707 7.595819 TTCAAAATAGATGACCCAACTTTGT 57.404 32.000 0.00 0.00 0.00 2.83
695 708 7.114811 CGTTTCAAAATAGATGACCCAACTTTG 59.885 37.037 0.00 0.00 0.00 2.77
696 709 7.145323 CGTTTCAAAATAGATGACCCAACTTT 58.855 34.615 0.00 0.00 0.00 2.66
697 710 6.294508 CCGTTTCAAAATAGATGACCCAACTT 60.295 38.462 0.00 0.00 0.00 2.66
698 711 5.183140 CCGTTTCAAAATAGATGACCCAACT 59.817 40.000 0.00 0.00 0.00 3.16
699 712 5.182380 TCCGTTTCAAAATAGATGACCCAAC 59.818 40.000 0.00 0.00 0.00 3.77
700 713 5.317808 TCCGTTTCAAAATAGATGACCCAA 58.682 37.500 0.00 0.00 0.00 4.12
701 714 4.912586 TCCGTTTCAAAATAGATGACCCA 58.087 39.130 0.00 0.00 0.00 4.51
702 715 4.335594 CCTCCGTTTCAAAATAGATGACCC 59.664 45.833 0.00 0.00 0.00 4.46
703 716 4.335594 CCCTCCGTTTCAAAATAGATGACC 59.664 45.833 0.00 0.00 0.00 4.02
704 717 5.183228 TCCCTCCGTTTCAAAATAGATGAC 58.817 41.667 0.00 0.00 0.00 3.06
705 718 5.045869 ACTCCCTCCGTTTCAAAATAGATGA 60.046 40.000 0.00 0.00 0.00 2.92
706 719 5.186198 ACTCCCTCCGTTTCAAAATAGATG 58.814 41.667 0.00 0.00 0.00 2.90
707 720 5.437191 ACTCCCTCCGTTTCAAAATAGAT 57.563 39.130 0.00 0.00 0.00 1.98
708 721 4.903045 ACTCCCTCCGTTTCAAAATAGA 57.097 40.909 0.00 0.00 0.00 1.98
709 722 6.583562 AGATACTCCCTCCGTTTCAAAATAG 58.416 40.000 0.00 0.00 0.00 1.73
710 723 6.555463 AGATACTCCCTCCGTTTCAAAATA 57.445 37.500 0.00 0.00 0.00 1.40
711 724 5.437191 AGATACTCCCTCCGTTTCAAAAT 57.563 39.130 0.00 0.00 0.00 1.82
712 725 4.903045 AGATACTCCCTCCGTTTCAAAA 57.097 40.909 0.00 0.00 0.00 2.44
713 726 4.903045 AAGATACTCCCTCCGTTTCAAA 57.097 40.909 0.00 0.00 0.00 2.69
714 727 4.903045 AAAGATACTCCCTCCGTTTCAA 57.097 40.909 0.00 0.00 0.00 2.69
715 728 4.041198 ACAAAAGATACTCCCTCCGTTTCA 59.959 41.667 0.00 0.00 0.00 2.69
716 729 4.392138 CACAAAAGATACTCCCTCCGTTTC 59.608 45.833 0.00 0.00 0.00 2.78
717 730 4.324267 CACAAAAGATACTCCCTCCGTTT 58.676 43.478 0.00 0.00 0.00 3.60
718 731 3.307480 CCACAAAAGATACTCCCTCCGTT 60.307 47.826 0.00 0.00 0.00 4.44
719 732 2.236395 CCACAAAAGATACTCCCTCCGT 59.764 50.000 0.00 0.00 0.00 4.69
720 733 2.906354 CCACAAAAGATACTCCCTCCG 58.094 52.381 0.00 0.00 0.00 4.63
721 734 2.026262 TGCCACAAAAGATACTCCCTCC 60.026 50.000 0.00 0.00 0.00 4.30
722 735 3.350219 TGCCACAAAAGATACTCCCTC 57.650 47.619 0.00 0.00 0.00 4.30
723 736 3.624777 CATGCCACAAAAGATACTCCCT 58.375 45.455 0.00 0.00 0.00 4.20
724 737 2.689983 CCATGCCACAAAAGATACTCCC 59.310 50.000 0.00 0.00 0.00 4.30
725 738 3.378427 GTCCATGCCACAAAAGATACTCC 59.622 47.826 0.00 0.00 0.00 3.85
726 739 3.378427 GGTCCATGCCACAAAAGATACTC 59.622 47.826 0.00 0.00 0.00 2.59
727 740 3.010584 AGGTCCATGCCACAAAAGATACT 59.989 43.478 0.00 0.00 0.00 2.12
728 741 3.129287 CAGGTCCATGCCACAAAAGATAC 59.871 47.826 0.00 0.00 0.00 2.24
1010 1023 1.043816 ACCACGAGCAGATCCCATAG 58.956 55.000 0.00 0.00 0.00 2.23
1323 2079 3.757745 AACAGTCTTTGTGTTTGTCCG 57.242 42.857 0.00 0.00 40.74 4.79
1336 2092 2.224426 TGATTGGCACCGTAAACAGTCT 60.224 45.455 0.00 0.00 0.00 3.24
1382 2396 0.609151 TTCAACGTTGATAGGCCCGA 59.391 50.000 30.10 11.18 37.00 5.14
1799 2866 3.795623 AGGGTACGTAGCTGTACAATG 57.204 47.619 22.84 0.00 45.16 2.82
1820 2887 5.178797 GGCTGCAGAAATAAAGTGAGAGTA 58.821 41.667 20.43 0.00 0.00 2.59
1824 2891 4.771590 TTGGCTGCAGAAATAAAGTGAG 57.228 40.909 20.43 0.00 0.00 3.51
1825 2892 5.528043 TTTTGGCTGCAGAAATAAAGTGA 57.472 34.783 20.43 0.00 0.00 3.41
1936 3028 4.882842 TTGTCTACCACTAGCATCACAA 57.117 40.909 0.00 0.00 0.00 3.33
2225 3344 8.177013 TGTTGATATGAACAAATCACATCTTCG 58.823 33.333 5.18 0.00 41.62 3.79
2406 3527 7.833285 AAACTGAAAAGGCTATTGAAGGTTA 57.167 32.000 0.00 0.00 0.00 2.85
2408 3529 6.731292 AAAACTGAAAAGGCTATTGAAGGT 57.269 33.333 0.00 0.00 0.00 3.50
2599 3741 7.067532 TCTTACAAATTAATGCACACTACCG 57.932 36.000 0.00 0.00 0.00 4.02
2737 3882 3.120683 CGCAAGCAAGTCTCGAATTTACA 60.121 43.478 0.00 0.00 0.00 2.41
2746 3892 1.461127 CCTACAACGCAAGCAAGTCTC 59.539 52.381 0.00 0.00 45.62 3.36
2853 4104 6.549952 CGTACTGTTAAGGTAGAGTGGTAAG 58.450 44.000 0.00 0.00 0.00 2.34
2859 4110 4.698583 CAGCGTACTGTTAAGGTAGAGT 57.301 45.455 0.00 0.00 39.22 3.24
2881 4132 1.616374 TCACGATGTTGTAGGCTGTGA 59.384 47.619 0.00 0.00 32.93 3.58
2940 4191 8.753175 CCTTACTAATTCACAACTAGCGATAAC 58.247 37.037 0.00 0.00 0.00 1.89
2949 4200 5.009631 TGCATGCCTTACTAATTCACAACT 58.990 37.500 16.68 0.00 0.00 3.16
3065 4317 3.262660 TCTCTGCTGTTCTGGTTGATGAT 59.737 43.478 0.00 0.00 0.00 2.45
3155 4407 6.237942 CGAACTCTAATGTTATTGTGCCTCTG 60.238 42.308 0.00 0.00 0.00 3.35
3296 4548 2.805295 CGAGGTGACAGGCTTACAACAA 60.805 50.000 8.16 0.00 0.00 2.83
3326 4578 5.474578 TGAGCTGAAGATACAGACAAGTT 57.525 39.130 0.00 0.00 39.94 2.66
3357 4609 1.619827 CCTACCCACGAAGGTGTACAA 59.380 52.381 10.76 0.00 42.80 2.41
3465 4719 5.945155 TCACCCAATTTGCGAATTAGTAAC 58.055 37.500 11.64 0.00 33.78 2.50
3685 4965 2.297597 CTCTTCTTGTTCACGGGAGACT 59.702 50.000 0.00 0.00 0.00 3.24
3693 4973 6.795399 TCATTGGTTTTCTCTTCTTGTTCAC 58.205 36.000 0.00 0.00 0.00 3.18
3739 5019 8.666573 CATGCCACAATTTATTCAGCATTTTAA 58.333 29.630 0.00 0.00 37.37 1.52
3740 5020 7.201626 GCATGCCACAATTTATTCAGCATTTTA 60.202 33.333 6.36 0.00 37.37 1.52
3741 5021 6.403855 GCATGCCACAATTTATTCAGCATTTT 60.404 34.615 6.36 0.00 37.37 1.82
3866 5380 3.787001 CAGAGGCCGGGGGTCTTC 61.787 72.222 2.18 0.00 38.01 2.87
3872 5386 4.559063 CAGATGCAGAGGCCGGGG 62.559 72.222 2.18 0.00 40.13 5.73
3873 5387 4.559063 CCAGATGCAGAGGCCGGG 62.559 72.222 2.18 0.00 40.13 5.73
3874 5388 4.559063 CCCAGATGCAGAGGCCGG 62.559 72.222 0.00 0.00 40.13 6.13
3877 5391 3.472943 ATCGCCCAGATGCAGAGGC 62.473 63.158 8.59 8.59 42.18 4.70
3878 5392 2.827423 ATCGCCCAGATGCAGAGG 59.173 61.111 0.00 0.00 38.36 3.69
3885 5399 1.897137 CTGCATGCATCGCCCAGAT 60.897 57.895 22.97 0.00 41.01 2.90
3886 5400 2.515290 CTGCATGCATCGCCCAGA 60.515 61.111 22.97 0.00 0.00 3.86
3887 5401 4.266070 GCTGCATGCATCGCCCAG 62.266 66.667 22.97 8.76 42.31 4.45
3890 5404 4.564116 GTGGCTGCATGCATCGCC 62.564 66.667 33.23 33.23 45.15 5.54
3891 5405 2.552585 AAAGTGGCTGCATGCATCGC 62.553 55.000 22.97 21.54 45.15 4.58
3892 5406 0.734309 TAAAGTGGCTGCATGCATCG 59.266 50.000 22.97 12.00 45.15 3.84
3893 5407 3.447918 AATAAAGTGGCTGCATGCATC 57.552 42.857 22.97 17.75 45.15 3.91
3894 5408 5.540400 ATTAATAAAGTGGCTGCATGCAT 57.460 34.783 22.97 6.91 45.15 3.96
3895 5409 5.341872 AATTAATAAAGTGGCTGCATGCA 57.658 34.783 21.29 21.29 45.15 3.96
3896 5410 7.652909 TGAATAATTAATAAAGTGGCTGCATGC 59.347 33.333 11.82 11.82 41.94 4.06
3897 5411 8.971321 GTGAATAATTAATAAAGTGGCTGCATG 58.029 33.333 0.50 0.00 0.00 4.06
3898 5412 8.694540 TGTGAATAATTAATAAAGTGGCTGCAT 58.305 29.630 0.50 0.00 0.00 3.96
3899 5413 8.060931 TGTGAATAATTAATAAAGTGGCTGCA 57.939 30.769 0.50 0.00 0.00 4.41
3900 5414 8.925161 TTGTGAATAATTAATAAAGTGGCTGC 57.075 30.769 0.00 0.00 0.00 5.25
3934 5448 8.958119 TCAGACTTACTGTTGTATTTCTTTGT 57.042 30.769 0.00 0.00 45.86 2.83
3935 5449 9.869844 CTTCAGACTTACTGTTGTATTTCTTTG 57.130 33.333 0.00 0.00 45.86 2.77
3936 5450 8.560374 GCTTCAGACTTACTGTTGTATTTCTTT 58.440 33.333 0.00 0.00 45.86 2.52
3937 5451 7.173390 GGCTTCAGACTTACTGTTGTATTTCTT 59.827 37.037 0.00 0.00 45.86 2.52
3938 5452 6.651225 GGCTTCAGACTTACTGTTGTATTTCT 59.349 38.462 0.00 0.00 45.86 2.52
3939 5453 6.426937 TGGCTTCAGACTTACTGTTGTATTTC 59.573 38.462 0.00 0.00 45.86 2.17
3940 5454 6.204882 GTGGCTTCAGACTTACTGTTGTATTT 59.795 38.462 0.00 0.00 45.86 1.40
3941 5455 5.701290 GTGGCTTCAGACTTACTGTTGTATT 59.299 40.000 0.00 0.00 45.86 1.89
3942 5456 5.238583 GTGGCTTCAGACTTACTGTTGTAT 58.761 41.667 0.00 0.00 45.86 2.29
3943 5457 4.502604 GGTGGCTTCAGACTTACTGTTGTA 60.503 45.833 0.00 0.00 45.86 2.41
3944 5458 3.467803 GTGGCTTCAGACTTACTGTTGT 58.532 45.455 0.00 0.00 45.86 3.32
3945 5459 2.808543 GGTGGCTTCAGACTTACTGTTG 59.191 50.000 0.00 0.00 45.86 3.33
3946 5460 2.548067 CGGTGGCTTCAGACTTACTGTT 60.548 50.000 0.00 0.00 45.86 3.16
3947 5461 1.000955 CGGTGGCTTCAGACTTACTGT 59.999 52.381 0.00 0.00 45.86 3.55
3948 5462 1.000955 ACGGTGGCTTCAGACTTACTG 59.999 52.381 0.00 0.00 46.97 2.74
3949 5463 1.272769 GACGGTGGCTTCAGACTTACT 59.727 52.381 0.00 0.00 0.00 2.24
3950 5464 1.272769 AGACGGTGGCTTCAGACTTAC 59.727 52.381 0.00 0.00 0.00 2.34
3951 5465 1.629043 AGACGGTGGCTTCAGACTTA 58.371 50.000 0.00 0.00 0.00 2.24
3952 5466 1.546476 CTAGACGGTGGCTTCAGACTT 59.454 52.381 0.00 0.00 0.00 3.01
3953 5467 1.178276 CTAGACGGTGGCTTCAGACT 58.822 55.000 0.00 0.00 0.00 3.24
3954 5468 0.173708 CCTAGACGGTGGCTTCAGAC 59.826 60.000 0.00 0.00 0.00 3.51
3955 5469 1.605058 GCCTAGACGGTGGCTTCAGA 61.605 60.000 1.01 0.00 45.26 3.27
3956 5470 1.153549 GCCTAGACGGTGGCTTCAG 60.154 63.158 1.01 0.00 45.26 3.02
3957 5471 2.978824 GCCTAGACGGTGGCTTCA 59.021 61.111 1.01 0.00 45.26 3.02
3962 5476 0.537188 AGATGTTGCCTAGACGGTGG 59.463 55.000 0.00 0.00 34.25 4.61
3963 5477 3.643763 GATAGATGTTGCCTAGACGGTG 58.356 50.000 0.00 0.00 34.25 4.94
3964 5478 2.293677 CGATAGATGTTGCCTAGACGGT 59.706 50.000 0.00 0.00 39.76 4.83
3965 5479 2.922758 GCGATAGATGTTGCCTAGACGG 60.923 54.545 0.00 0.00 39.76 4.79
3966 5480 2.030717 AGCGATAGATGTTGCCTAGACG 60.031 50.000 0.00 0.00 39.76 4.18
3967 5481 3.651803 AGCGATAGATGTTGCCTAGAC 57.348 47.619 0.00 0.00 39.76 2.59
3968 5482 4.399219 AGTAGCGATAGATGTTGCCTAGA 58.601 43.478 0.00 0.00 39.76 2.43
3969 5483 4.216472 TGAGTAGCGATAGATGTTGCCTAG 59.784 45.833 0.00 0.00 39.76 3.02
3970 5484 4.142038 TGAGTAGCGATAGATGTTGCCTA 58.858 43.478 0.00 0.00 39.76 3.93
3971 5485 2.959030 TGAGTAGCGATAGATGTTGCCT 59.041 45.455 0.00 0.00 39.76 4.75
3972 5486 3.371102 TGAGTAGCGATAGATGTTGCC 57.629 47.619 0.00 0.00 39.76 4.52
3973 5487 5.746245 GGATATGAGTAGCGATAGATGTTGC 59.254 44.000 0.00 0.00 39.76 4.17
3974 5488 6.856895 TGGATATGAGTAGCGATAGATGTTG 58.143 40.000 0.00 0.00 39.76 3.33
3975 5489 6.887002 TCTGGATATGAGTAGCGATAGATGTT 59.113 38.462 0.00 0.00 39.76 2.71
3976 5490 6.418946 TCTGGATATGAGTAGCGATAGATGT 58.581 40.000 0.00 0.00 39.76 3.06
3977 5491 6.934048 TCTGGATATGAGTAGCGATAGATG 57.066 41.667 0.00 0.00 39.76 2.90
3978 5492 7.286313 TCATCTGGATATGAGTAGCGATAGAT 58.714 38.462 0.00 0.00 32.41 1.98
3979 5493 6.653989 TCATCTGGATATGAGTAGCGATAGA 58.346 40.000 0.00 0.00 32.41 1.98
3980 5494 6.934048 TCATCTGGATATGAGTAGCGATAG 57.066 41.667 0.00 0.00 32.18 2.08
3981 5495 7.056635 TCATCATCTGGATATGAGTAGCGATA 58.943 38.462 0.00 0.00 39.18 2.92
3982 5496 5.890419 TCATCATCTGGATATGAGTAGCGAT 59.110 40.000 0.00 0.00 39.18 4.58
3983 5497 5.256474 TCATCATCTGGATATGAGTAGCGA 58.744 41.667 0.00 0.00 39.18 4.93
3984 5498 5.573337 TCATCATCTGGATATGAGTAGCG 57.427 43.478 0.00 0.00 39.18 4.26
3985 5499 6.154192 TCCTTCATCATCTGGATATGAGTAGC 59.846 42.308 0.00 0.00 39.18 3.58
3986 5500 7.715266 TCCTTCATCATCTGGATATGAGTAG 57.285 40.000 0.00 0.00 39.18 2.57
3987 5501 7.364497 GCATCCTTCATCATCTGGATATGAGTA 60.364 40.741 0.00 0.00 39.18 2.59
3988 5502 6.576641 GCATCCTTCATCATCTGGATATGAGT 60.577 42.308 0.00 0.00 39.18 3.41
3989 5503 5.818336 GCATCCTTCATCATCTGGATATGAG 59.182 44.000 0.00 0.00 39.18 2.90
3990 5504 5.487845 AGCATCCTTCATCATCTGGATATGA 59.512 40.000 0.00 0.00 40.07 2.15
3991 5505 5.586643 CAGCATCCTTCATCATCTGGATATG 59.413 44.000 0.00 0.00 37.22 1.78
3992 5506 5.487845 TCAGCATCCTTCATCATCTGGATAT 59.512 40.000 0.00 0.00 37.22 1.63
3993 5507 4.842380 TCAGCATCCTTCATCATCTGGATA 59.158 41.667 0.00 0.00 37.22 2.59
3994 5508 3.651423 TCAGCATCCTTCATCATCTGGAT 59.349 43.478 0.00 0.00 39.64 3.41
3995 5509 3.043418 TCAGCATCCTTCATCATCTGGA 58.957 45.455 0.00 0.00 0.00 3.86
3996 5510 3.487120 TCAGCATCCTTCATCATCTGG 57.513 47.619 0.00 0.00 0.00 3.86
3997 5511 5.795972 ACTATCAGCATCCTTCATCATCTG 58.204 41.667 0.00 0.00 0.00 2.90
3998 5512 5.046448 GGACTATCAGCATCCTTCATCATCT 60.046 44.000 0.00 0.00 0.00 2.90
3999 5513 5.177326 GGACTATCAGCATCCTTCATCATC 58.823 45.833 0.00 0.00 0.00 2.92
4000 5514 4.322574 CGGACTATCAGCATCCTTCATCAT 60.323 45.833 0.00 0.00 0.00 2.45
4001 5515 3.006217 CGGACTATCAGCATCCTTCATCA 59.994 47.826 0.00 0.00 0.00 3.07
4002 5516 3.583806 CGGACTATCAGCATCCTTCATC 58.416 50.000 0.00 0.00 0.00 2.92
4003 5517 2.301296 CCGGACTATCAGCATCCTTCAT 59.699 50.000 0.00 0.00 0.00 2.57
4004 5518 1.688735 CCGGACTATCAGCATCCTTCA 59.311 52.381 0.00 0.00 0.00 3.02
4005 5519 1.001406 CCCGGACTATCAGCATCCTTC 59.999 57.143 0.73 0.00 0.00 3.46
4006 5520 1.051812 CCCGGACTATCAGCATCCTT 58.948 55.000 0.73 0.00 0.00 3.36
4007 5521 1.476007 GCCCGGACTATCAGCATCCT 61.476 60.000 0.73 0.00 0.00 3.24
4008 5522 1.004440 GCCCGGACTATCAGCATCC 60.004 63.158 0.73 0.00 0.00 3.51
4009 5523 1.004440 GGCCCGGACTATCAGCATC 60.004 63.158 0.73 0.00 0.00 3.91
4010 5524 0.178932 TAGGCCCGGACTATCAGCAT 60.179 55.000 0.73 0.00 0.00 3.79
4011 5525 0.397957 TTAGGCCCGGACTATCAGCA 60.398 55.000 0.73 0.00 0.00 4.41
4012 5526 0.977395 ATTAGGCCCGGACTATCAGC 59.023 55.000 0.73 0.00 0.00 4.26
4013 5527 2.496470 GGTATTAGGCCCGGACTATCAG 59.504 54.545 0.73 0.00 0.00 2.90
4014 5528 2.158279 TGGTATTAGGCCCGGACTATCA 60.158 50.000 0.73 0.00 0.00 2.15
4015 5529 2.233186 GTGGTATTAGGCCCGGACTATC 59.767 54.545 0.73 0.00 0.00 2.08
4016 5530 2.254508 GTGGTATTAGGCCCGGACTAT 58.745 52.381 0.73 0.00 0.00 2.12
4017 5531 1.063038 TGTGGTATTAGGCCCGGACTA 60.063 52.381 0.73 0.00 0.00 2.59
4018 5532 0.325860 TGTGGTATTAGGCCCGGACT 60.326 55.000 0.73 0.00 0.00 3.85
4019 5533 0.106149 CTGTGGTATTAGGCCCGGAC 59.894 60.000 0.73 0.00 0.00 4.79
4020 5534 0.031917 TCTGTGGTATTAGGCCCGGA 60.032 55.000 0.73 0.00 0.00 5.14
4021 5535 0.106149 GTCTGTGGTATTAGGCCCGG 59.894 60.000 0.00 0.00 0.00 5.73
4022 5536 0.106149 GGTCTGTGGTATTAGGCCCG 59.894 60.000 0.00 0.00 32.50 6.13
4023 5537 1.416772 GAGGTCTGTGGTATTAGGCCC 59.583 57.143 0.00 0.00 39.53 5.80
4024 5538 1.068741 CGAGGTCTGTGGTATTAGGCC 59.931 57.143 0.00 0.00 38.99 5.19
4025 5539 1.538419 GCGAGGTCTGTGGTATTAGGC 60.538 57.143 0.00 0.00 0.00 3.93
4026 5540 1.754803 TGCGAGGTCTGTGGTATTAGG 59.245 52.381 0.00 0.00 0.00 2.69
4027 5541 2.427453 ACTGCGAGGTCTGTGGTATTAG 59.573 50.000 0.00 0.00 0.00 1.73
4028 5542 2.426024 GACTGCGAGGTCTGTGGTATTA 59.574 50.000 0.00 0.00 33.81 0.98
4029 5543 1.204941 GACTGCGAGGTCTGTGGTATT 59.795 52.381 0.00 0.00 33.81 1.89
4030 5544 0.818296 GACTGCGAGGTCTGTGGTAT 59.182 55.000 0.00 0.00 33.81 2.73
4031 5545 0.538746 TGACTGCGAGGTCTGTGGTA 60.539 55.000 9.06 0.00 37.16 3.25
4032 5546 1.399744 TTGACTGCGAGGTCTGTGGT 61.400 55.000 9.06 0.00 37.16 4.16
4033 5547 0.668706 CTTGACTGCGAGGTCTGTGG 60.669 60.000 9.06 0.00 37.16 4.17
4034 5548 1.287730 GCTTGACTGCGAGGTCTGTG 61.288 60.000 9.06 2.35 37.16 3.66
4035 5549 1.005630 GCTTGACTGCGAGGTCTGT 60.006 57.895 9.06 0.00 37.16 3.41
4036 5550 1.739562 GGCTTGACTGCGAGGTCTG 60.740 63.158 9.06 4.47 37.16 3.51
4037 5551 0.612174 TAGGCTTGACTGCGAGGTCT 60.612 55.000 0.00 0.00 37.16 3.85
4038 5552 0.246635 TTAGGCTTGACTGCGAGGTC 59.753 55.000 0.00 0.00 36.81 3.85
4039 5553 0.037232 GTTAGGCTTGACTGCGAGGT 60.037 55.000 0.00 0.00 0.00 3.85
4040 5554 0.037326 TGTTAGGCTTGACTGCGAGG 60.037 55.000 0.00 0.00 0.00 4.63
4041 5555 1.929836 GATGTTAGGCTTGACTGCGAG 59.070 52.381 0.00 0.00 0.00 5.03
4042 5556 1.550524 AGATGTTAGGCTTGACTGCGA 59.449 47.619 0.00 0.00 0.00 5.10
4043 5557 2.015736 AGATGTTAGGCTTGACTGCG 57.984 50.000 0.00 0.00 0.00 5.18
4044 5558 4.759782 TCTTAGATGTTAGGCTTGACTGC 58.240 43.478 0.00 0.00 0.00 4.40
4045 5559 6.700960 CAGATCTTAGATGTTAGGCTTGACTG 59.299 42.308 0.00 0.00 0.00 3.51
4046 5560 6.609212 TCAGATCTTAGATGTTAGGCTTGACT 59.391 38.462 0.00 0.00 0.00 3.41
4047 5561 6.810911 TCAGATCTTAGATGTTAGGCTTGAC 58.189 40.000 0.00 0.00 0.00 3.18
4048 5562 6.041409 CCTCAGATCTTAGATGTTAGGCTTGA 59.959 42.308 6.66 0.00 0.00 3.02
4049 5563 6.222389 CCTCAGATCTTAGATGTTAGGCTTG 58.778 44.000 6.66 0.00 0.00 4.01
4050 5564 5.221621 GCCTCAGATCTTAGATGTTAGGCTT 60.222 44.000 27.15 0.00 42.89 4.35
4051 5565 4.283212 GCCTCAGATCTTAGATGTTAGGCT 59.717 45.833 27.15 5.43 42.89 4.58
4052 5566 4.562552 GGCCTCAGATCTTAGATGTTAGGC 60.563 50.000 26.75 26.75 44.94 3.93
4053 5567 4.020662 GGGCCTCAGATCTTAGATGTTAGG 60.021 50.000 13.37 13.37 0.00 2.69
4054 5568 4.020662 GGGGCCTCAGATCTTAGATGTTAG 60.021 50.000 0.84 0.00 0.00 2.34
4055 5569 3.904339 GGGGCCTCAGATCTTAGATGTTA 59.096 47.826 0.84 0.00 0.00 2.41
4056 5570 2.708325 GGGGCCTCAGATCTTAGATGTT 59.292 50.000 0.84 0.00 0.00 2.71
4057 5571 2.334023 GGGGCCTCAGATCTTAGATGT 58.666 52.381 0.84 0.00 0.00 3.06
4058 5572 2.333069 TGGGGCCTCAGATCTTAGATG 58.667 52.381 0.00 0.00 0.00 2.90
4059 5573 2.708325 GTTGGGGCCTCAGATCTTAGAT 59.292 50.000 4.89 0.00 0.00 1.98
4060 5574 2.119495 GTTGGGGCCTCAGATCTTAGA 58.881 52.381 4.89 0.00 0.00 2.10
4061 5575 1.141858 GGTTGGGGCCTCAGATCTTAG 59.858 57.143 4.89 0.00 0.00 2.18
4062 5576 1.213296 GGTTGGGGCCTCAGATCTTA 58.787 55.000 4.89 0.00 0.00 2.10
4063 5577 0.551131 AGGTTGGGGCCTCAGATCTT 60.551 55.000 4.89 0.00 32.39 2.40
4064 5578 0.343372 TAGGTTGGGGCCTCAGATCT 59.657 55.000 4.89 7.56 39.94 2.75
4065 5579 0.761802 CTAGGTTGGGGCCTCAGATC 59.238 60.000 4.89 0.06 39.94 2.75
4066 5580 1.348775 GCTAGGTTGGGGCCTCAGAT 61.349 60.000 4.89 0.00 39.94 2.90
4067 5581 1.995626 GCTAGGTTGGGGCCTCAGA 60.996 63.158 4.89 0.00 39.94 3.27
4068 5582 2.592308 GCTAGGTTGGGGCCTCAG 59.408 66.667 4.89 0.00 39.94 3.35
4069 5583 3.015145 GGCTAGGTTGGGGCCTCA 61.015 66.667 0.00 0.00 42.31 3.86
4070 5584 3.015145 TGGCTAGGTTGGGGCCTC 61.015 66.667 0.84 0.00 45.45 4.70
4071 5585 3.339093 GTGGCTAGGTTGGGGCCT 61.339 66.667 0.84 0.00 45.45 5.19
4072 5586 2.919096 AAGTGGCTAGGTTGGGGCC 61.919 63.158 0.00 0.00 45.45 5.80
4073 5587 1.678970 CAAGTGGCTAGGTTGGGGC 60.679 63.158 0.00 0.00 0.00 5.80
4074 5588 1.678970 GCAAGTGGCTAGGTTGGGG 60.679 63.158 0.00 0.00 40.25 4.96
4075 5589 1.678970 GGCAAGTGGCTAGGTTGGG 60.679 63.158 0.00 0.00 44.01 4.12
4076 5590 0.962356 CTGGCAAGTGGCTAGGTTGG 60.962 60.000 6.41 0.00 46.49 3.77
4077 5591 2.559785 CTGGCAAGTGGCTAGGTTG 58.440 57.895 6.41 0.00 46.49 3.77
4082 5596 1.679311 CAGACCTGGCAAGTGGCTA 59.321 57.895 6.41 0.00 44.01 3.93
4083 5597 2.433446 CAGACCTGGCAAGTGGCT 59.567 61.111 6.41 0.00 44.01 4.75
4084 5598 2.674380 CCAGACCTGGCAAGTGGC 60.674 66.667 2.75 0.00 44.73 5.01
4093 5607 2.281761 GTGTGTGCCCCAGACCTG 60.282 66.667 0.00 0.00 31.28 4.00
4139 5653 4.954970 AGCGGTGGCAGTTGGTGG 62.955 66.667 0.00 0.00 43.41 4.61
4140 5654 3.357079 GAGCGGTGGCAGTTGGTG 61.357 66.667 0.00 0.00 43.41 4.17
4141 5655 4.643387 GGAGCGGTGGCAGTTGGT 62.643 66.667 0.00 0.00 43.41 3.67
4142 5656 3.925630 ATGGAGCGGTGGCAGTTGG 62.926 63.158 0.00 0.00 43.41 3.77
4143 5657 2.360350 ATGGAGCGGTGGCAGTTG 60.360 61.111 0.00 0.00 43.41 3.16
4144 5658 2.045926 GATGGAGCGGTGGCAGTT 60.046 61.111 0.00 0.00 43.41 3.16
4145 5659 2.527951 GAAGATGGAGCGGTGGCAGT 62.528 60.000 0.00 0.00 43.41 4.40
4146 5660 1.817099 GAAGATGGAGCGGTGGCAG 60.817 63.158 0.00 0.00 43.41 4.85
4147 5661 2.268920 GAAGATGGAGCGGTGGCA 59.731 61.111 0.00 0.00 43.41 4.92
4148 5662 1.817099 CTGAAGATGGAGCGGTGGC 60.817 63.158 0.00 0.00 40.37 5.01
4149 5663 0.179089 CTCTGAAGATGGAGCGGTGG 60.179 60.000 0.00 0.00 0.00 4.61
4150 5664 0.534412 ACTCTGAAGATGGAGCGGTG 59.466 55.000 0.00 0.00 33.29 4.94
4151 5665 1.066573 CAACTCTGAAGATGGAGCGGT 60.067 52.381 0.00 0.00 33.29 5.68
4152 5666 1.066573 ACAACTCTGAAGATGGAGCGG 60.067 52.381 0.00 0.00 33.29 5.52
4153 5667 2.376808 ACAACTCTGAAGATGGAGCG 57.623 50.000 0.00 0.00 33.29 5.03
4154 5668 4.180057 CAGTACAACTCTGAAGATGGAGC 58.820 47.826 0.00 0.00 35.20 4.70
4155 5669 4.753233 CCAGTACAACTCTGAAGATGGAG 58.247 47.826 0.00 0.00 35.20 3.86
4156 5670 3.055819 GCCAGTACAACTCTGAAGATGGA 60.056 47.826 0.00 0.00 35.20 3.41
4157 5671 3.265791 GCCAGTACAACTCTGAAGATGG 58.734 50.000 0.00 0.00 35.20 3.51
4158 5672 2.926200 CGCCAGTACAACTCTGAAGATG 59.074 50.000 0.00 0.00 35.20 2.90
4159 5673 2.675317 GCGCCAGTACAACTCTGAAGAT 60.675 50.000 0.00 0.00 35.20 2.40
4160 5674 1.336887 GCGCCAGTACAACTCTGAAGA 60.337 52.381 0.00 0.00 35.20 2.87
4161 5675 1.071605 GCGCCAGTACAACTCTGAAG 58.928 55.000 0.00 0.00 35.20 3.02
4162 5676 0.391228 TGCGCCAGTACAACTCTGAA 59.609 50.000 4.18 0.00 35.20 3.02
4163 5677 0.608130 ATGCGCCAGTACAACTCTGA 59.392 50.000 4.18 0.00 35.20 3.27
4164 5678 1.002366 GATGCGCCAGTACAACTCTG 58.998 55.000 4.18 0.00 0.00 3.35
4165 5679 0.608130 TGATGCGCCAGTACAACTCT 59.392 50.000 4.18 0.00 0.00 3.24
4166 5680 1.128692 GTTGATGCGCCAGTACAACTC 59.871 52.381 4.18 0.00 38.10 3.01
4167 5681 1.156736 GTTGATGCGCCAGTACAACT 58.843 50.000 4.18 0.00 38.10 3.16
4168 5682 1.156736 AGTTGATGCGCCAGTACAAC 58.843 50.000 4.18 13.57 40.37 3.32
4169 5683 1.890876 AAGTTGATGCGCCAGTACAA 58.109 45.000 4.18 1.18 0.00 2.41
4170 5684 1.535028 CAAAGTTGATGCGCCAGTACA 59.465 47.619 4.18 0.00 0.00 2.90
4171 5685 1.729149 GCAAAGTTGATGCGCCAGTAC 60.729 52.381 4.18 0.00 33.57 2.73
4172 5686 0.521291 GCAAAGTTGATGCGCCAGTA 59.479 50.000 4.18 0.00 33.57 2.74
4173 5687 1.286880 GCAAAGTTGATGCGCCAGT 59.713 52.632 4.18 0.00 33.57 4.00
4174 5688 4.157817 GCAAAGTTGATGCGCCAG 57.842 55.556 4.18 0.00 33.57 4.85
4179 5693 3.303001 GCTAGATCGAGCAAAGTTGATGC 60.303 47.826 21.36 0.00 42.36 3.91
4180 5694 4.025896 CAGCTAGATCGAGCAAAGTTGATG 60.026 45.833 26.72 11.76 45.43 3.07
4181 5695 4.118410 CAGCTAGATCGAGCAAAGTTGAT 58.882 43.478 26.72 3.59 45.43 2.57
4182 5696 3.056536 ACAGCTAGATCGAGCAAAGTTGA 60.057 43.478 26.72 0.00 45.43 3.18
4183 5697 3.257393 ACAGCTAGATCGAGCAAAGTTG 58.743 45.455 26.72 18.35 45.43 3.16
4184 5698 3.516615 GACAGCTAGATCGAGCAAAGTT 58.483 45.455 26.72 5.71 45.43 2.66
4185 5699 2.478709 CGACAGCTAGATCGAGCAAAGT 60.479 50.000 26.72 21.03 45.43 2.66
4186 5700 2.115595 CGACAGCTAGATCGAGCAAAG 58.884 52.381 26.72 18.41 45.43 2.77
4187 5701 1.472878 ACGACAGCTAGATCGAGCAAA 59.527 47.619 26.72 0.00 45.43 3.68
4188 5702 1.064208 GACGACAGCTAGATCGAGCAA 59.936 52.381 26.72 0.00 45.43 3.91
4189 5703 0.658368 GACGACAGCTAGATCGAGCA 59.342 55.000 26.72 0.00 45.43 4.26
4190 5704 0.383737 CGACGACAGCTAGATCGAGC 60.384 60.000 19.06 19.06 40.86 5.03
4191 5705 1.071107 GTCGACGACAGCTAGATCGAG 60.071 57.143 22.66 12.18 42.03 4.04
4192 5706 0.928922 GTCGACGACAGCTAGATCGA 59.071 55.000 22.66 12.71 40.86 3.59
4193 5707 0.382030 CGTCGACGACAGCTAGATCG 60.382 60.000 33.35 11.47 43.02 3.69
4194 5708 0.655048 GCGTCGACGACAGCTAGATC 60.655 60.000 39.74 15.14 43.02 2.75
4195 5709 1.352404 GCGTCGACGACAGCTAGAT 59.648 57.895 39.74 0.00 43.02 1.98
4196 5710 2.783275 GCGTCGACGACAGCTAGA 59.217 61.111 39.74 0.00 43.02 2.43
4226 5740 3.953775 AGGGAGGTGGTGCCGTTG 61.954 66.667 0.00 0.00 43.04 4.10
4227 5741 3.953775 CAGGGAGGTGGTGCCGTT 61.954 66.667 0.00 0.00 43.04 4.44
4241 5755 4.724697 CAACTGTTCGCGCGCAGG 62.725 66.667 31.28 16.35 37.07 4.85
4242 5756 3.620187 CTCAACTGTTCGCGCGCAG 62.620 63.158 32.61 28.21 38.58 5.18
4243 5757 3.701530 CTCAACTGTTCGCGCGCA 61.702 61.111 32.61 17.79 0.00 6.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.