Multiple sequence alignment - TraesCS5D01G288300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G288300 chr5D 100.000 4656 0 0 1 4656 387685313 387680658 0.000000e+00 8599.0
1 TraesCS5D01G288300 chr5D 75.750 1233 262 29 2260 3470 387706516 387705299 1.870000e-163 586.0
2 TraesCS5D01G288300 chr5D 80.702 399 62 10 3027 3416 387712287 387711895 3.520000e-76 296.0
3 TraesCS5D01G288300 chr5D 96.825 126 4 0 1390 1515 484999679 484999554 1.310000e-50 211.0
4 TraesCS5D01G288300 chr5D 71.853 572 116 35 2658 3202 390695449 390696002 6.330000e-24 122.0
5 TraesCS5D01G288300 chr5A 95.892 3116 73 14 1063 4168 490326748 490323678 0.000000e+00 4994.0
6 TraesCS5D01G288300 chr5A 92.693 1519 75 18 1061 2551 490416786 490415276 0.000000e+00 2158.0
7 TraesCS5D01G288300 chr5A 94.153 838 49 0 2584 3421 490415280 490414443 0.000000e+00 1277.0
8 TraesCS5D01G288300 chr5A 75.912 1233 263 26 2260 3470 490594611 490593391 6.670000e-168 601.0
9 TraesCS5D01G288300 chr5A 75.719 1182 242 32 2260 3416 490652339 490651178 6.810000e-153 551.0
10 TraesCS5D01G288300 chr5A 92.705 329 14 4 284 609 490327723 490327402 2.540000e-127 466.0
11 TraesCS5D01G288300 chr5A 91.579 285 15 6 613 888 490327428 490327144 7.310000e-103 385.0
12 TraesCS5D01G288300 chr5A 87.255 204 4 7 883 1064 490327106 490326903 3.650000e-51 213.0
13 TraesCS5D01G288300 chr5A 96.748 123 4 0 1390 1512 573836684 573836806 6.110000e-49 206.0
14 TraesCS5D01G288300 chr5A 96.667 90 3 0 101 190 490327936 490327847 2.900000e-32 150.0
15 TraesCS5D01G288300 chr5B 93.026 1950 92 16 1732 3648 466007222 466005284 0.000000e+00 2808.0
16 TraesCS5D01G288300 chr5B 90.354 622 38 9 1063 1668 466007837 466007222 0.000000e+00 797.0
17 TraesCS5D01G288300 chr5B 85.625 160 8 11 920 1064 466008125 466007966 2.240000e-33 154.0
18 TraesCS5D01G288300 chr5B 72.163 564 123 29 2658 3202 473115635 473115087 1.750000e-29 141.0
19 TraesCS5D01G288300 chr5B 71.661 554 114 34 2658 3185 471024212 471024748 3.810000e-21 113.0
20 TraesCS5D01G288300 chr6B 92.633 638 32 7 1390 2018 529173079 529172448 0.000000e+00 904.0
21 TraesCS5D01G288300 chr7D 96.349 493 13 3 4164 4656 155361861 155362348 0.000000e+00 806.0
22 TraesCS5D01G288300 chr7D 95.697 488 15 4 4169 4656 180980995 180980514 0.000000e+00 780.0
23 TraesCS5D01G288300 chr7D 95.325 492 17 4 4165 4656 15196401 15195916 0.000000e+00 776.0
24 TraesCS5D01G288300 chr1D 96.115 489 14 4 4168 4656 79809737 79809254 0.000000e+00 793.0
25 TraesCS5D01G288300 chr1D 91.509 106 7 1 3755 3860 47030362 47030259 1.350000e-30 145.0
26 TraesCS5D01G288300 chr3D 95.910 489 17 2 4168 4656 57735792 57736277 0.000000e+00 789.0
27 TraesCS5D01G288300 chr3D 95.492 488 19 2 4169 4656 45662577 45662093 0.000000e+00 776.0
28 TraesCS5D01G288300 chr3D 95.652 46 2 0 1662 1707 362199713 362199668 1.800000e-09 75.0
29 TraesCS5D01G288300 chr2D 95.706 489 17 3 4169 4656 617236818 617236333 0.000000e+00 784.0
30 TraesCS5D01G288300 chr2D 95.297 489 18 4 4168 4656 495909246 495908763 0.000000e+00 771.0
31 TraesCS5D01G288300 chr2D 92.381 105 6 1 3756 3860 22868478 22868376 1.040000e-31 148.0
32 TraesCS5D01G288300 chr6D 94.877 488 21 2 4169 4656 355599671 355599188 0.000000e+00 760.0
33 TraesCS5D01G288300 chr6D 100.000 41 0 0 1663 1703 58245373 58245413 5.000000e-10 76.8
34 TraesCS5D01G288300 chr6D 82.927 82 9 3 1662 1742 2894677 2894754 8.360000e-08 69.4
35 TraesCS5D01G288300 chr6D 95.238 42 2 0 1662 1703 35626734 35626775 3.010000e-07 67.6
36 TraesCS5D01G288300 chr3B 91.237 194 14 3 110 301 792103725 792103533 1.280000e-65 261.0
37 TraesCS5D01G288300 chr3B 91.237 194 14 3 110 301 792141021 792140829 1.280000e-65 261.0
38 TraesCS5D01G288300 chr3B 88.660 194 18 4 110 301 792179059 792178868 2.800000e-57 233.0
39 TraesCS5D01G288300 chr3B 87.255 204 13 6 333 532 792246189 792245995 2.180000e-53 220.0
40 TraesCS5D01G288300 chr3B 94.048 84 4 1 527 610 792245086 792245004 4.890000e-25 126.0
41 TraesCS5D01G288300 chr3B 93.976 83 3 2 527 608 792082911 792082830 1.760000e-24 124.0
42 TraesCS5D01G288300 chr3B 92.857 84 5 1 527 610 792119552 792119470 2.280000e-23 121.0
43 TraesCS5D01G288300 chr3B 87.368 95 8 2 715 805 770112853 770112947 6.370000e-19 106.0
44 TraesCS5D01G288300 chr3B 98.148 54 0 1 281 333 792103487 792103434 4.960000e-15 93.5
45 TraesCS5D01G288300 chr3B 92.424 66 4 1 47 112 792104637 792104573 4.960000e-15 93.5
46 TraesCS5D01G288300 chr3B 98.148 54 0 1 281 333 792140783 792140730 4.960000e-15 93.5
47 TraesCS5D01G288300 chr3B 92.424 66 4 1 47 112 792179969 792179905 4.960000e-15 93.5
48 TraesCS5D01G288300 chr3B 96.296 54 1 1 281 333 792178822 792178769 2.310000e-13 87.9
49 TraesCS5D01G288300 chr4D 96.748 123 4 0 1390 1512 64562503 64562625 6.110000e-49 206.0
50 TraesCS5D01G288300 chr4D 90.566 106 8 1 3755 3860 499682480 499682377 6.280000e-29 139.0
51 TraesCS5D01G288300 chr4D 97.619 42 1 0 1662 1703 463465511 463465552 6.460000e-09 73.1
52 TraesCS5D01G288300 chr4D 100.000 34 0 0 1670 1703 70354167 70354200 3.890000e-06 63.9
53 TraesCS5D01G288300 chr2A 84.264 197 10 6 3755 3932 333796079 333795885 6.190000e-39 172.0
54 TraesCS5D01G288300 chr1A 84.264 197 10 6 3755 3932 415791310 415791116 6.190000e-39 172.0
55 TraesCS5D01G288300 chr1A 90.826 109 8 1 3752 3860 27878829 27878935 1.350000e-30 145.0
56 TraesCS5D01G288300 chr1A 90.000 50 3 2 1656 1703 517095914 517095963 3.890000e-06 63.9
57 TraesCS5D01G288300 chr4A 89.908 109 9 1 3752 3860 612729238 612729344 6.280000e-29 139.0
58 TraesCS5D01G288300 chr3A 89.908 109 9 1 3752 3860 570474507 570474613 6.280000e-29 139.0
59 TraesCS5D01G288300 chr3A 95.556 45 2 0 1659 1703 41365243 41365287 6.460000e-09 73.1
60 TraesCS5D01G288300 chr6A 100.000 41 0 0 1663 1703 73561990 73562030 5.000000e-10 76.8
61 TraesCS5D01G288300 chr6A 82.927 82 9 3 1662 1742 1893520 1893597 8.360000e-08 69.4
62 TraesCS5D01G288300 chr6A 93.478 46 3 0 1662 1707 209391428 209391383 8.360000e-08 69.4
63 TraesCS5D01G288300 chr1B 97.619 42 1 0 1665 1706 325271809 325271768 6.460000e-09 73.1
64 TraesCS5D01G288300 chr1B 93.617 47 3 0 1664 1710 39519080 39519034 2.320000e-08 71.3
65 TraesCS5D01G288300 chrUn 95.238 42 2 0 1665 1706 3503304 3503345 3.010000e-07 67.6
66 TraesCS5D01G288300 chrUn 95.238 42 2 0 1665 1706 3526112 3526153 3.010000e-07 67.6
67 TraesCS5D01G288300 chrUn 95.238 42 2 0 1665 1706 359313938 359313979 3.010000e-07 67.6
68 TraesCS5D01G288300 chrUn 95.238 42 2 0 1665 1706 419390101 419390060 3.010000e-07 67.6
69 TraesCS5D01G288300 chrUn 90.698 43 3 1 1658 1699 16392822 16392780 6.510000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G288300 chr5D 387680658 387685313 4655 True 8599.0 8599 100.000000 1 4656 1 chr5D.!!$R1 4655
1 TraesCS5D01G288300 chr5D 387705299 387706516 1217 True 586.0 586 75.750000 2260 3470 1 chr5D.!!$R2 1210
2 TraesCS5D01G288300 chr5A 490414443 490416786 2343 True 1717.5 2158 93.423000 1061 3421 2 chr5A.!!$R4 2360
3 TraesCS5D01G288300 chr5A 490323678 490327936 4258 True 1241.6 4994 92.819600 101 4168 5 chr5A.!!$R3 4067
4 TraesCS5D01G288300 chr5A 490593391 490594611 1220 True 601.0 601 75.912000 2260 3470 1 chr5A.!!$R1 1210
5 TraesCS5D01G288300 chr5A 490651178 490652339 1161 True 551.0 551 75.719000 2260 3416 1 chr5A.!!$R2 1156
6 TraesCS5D01G288300 chr5B 466005284 466008125 2841 True 1253.0 2808 89.668333 920 3648 3 chr5B.!!$R2 2728
7 TraesCS5D01G288300 chr6B 529172448 529173079 631 True 904.0 904 92.633000 1390 2018 1 chr6B.!!$R1 628

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
200 201 0.034186 TTGCAGCTTATCCCTGGTGG 60.034 55.000 0.00 0.0 32.94 4.61 F
206 207 0.107017 CTTATCCCTGGTGGCTGGTG 60.107 60.000 0.00 0.0 0.00 4.17 F
392 449 0.466922 ATGCTATGCAAGGGAGCCAC 60.467 55.000 9.84 0.0 43.62 5.01 F
1323 1620 0.524862 GGCAGTGCTGGTGAGAATTG 59.475 55.000 16.11 0.0 0.00 2.32 F
2621 2996 1.205893 AGCTAGAGTGCCTTCTTTCCG 59.794 52.381 0.00 0.0 0.00 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1384 1684 0.037590 TATTGTGGTGGTGGAGTGGC 59.962 55.000 0.00 0.0 0.00 5.01 R
1449 1755 3.195825 ACTCCGAATATGCATACCTAGCC 59.804 47.826 8.99 0.0 0.00 3.93 R
1537 1847 3.764885 GCGCAAGGTCTCAACATTAAT 57.235 42.857 0.30 0.0 38.28 1.40 R
3239 3625 4.748102 GTCAAGATGACCGTTTCAGTTGTA 59.252 41.667 0.00 0.0 41.37 2.41 R
3737 4123 0.033601 TTGCATTCCTGGCCCGTATT 60.034 50.000 0.00 0.0 0.00 1.89 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 4.467084 GCGACGATGCCCCCTGAA 62.467 66.667 0.00 0.00 0.00 3.02
19 20 2.267642 CGACGATGCCCCCTGAAA 59.732 61.111 0.00 0.00 0.00 2.69
20 21 1.153168 CGACGATGCCCCCTGAAAT 60.153 57.895 0.00 0.00 0.00 2.17
21 22 0.105964 CGACGATGCCCCCTGAAATA 59.894 55.000 0.00 0.00 0.00 1.40
22 23 1.873903 CGACGATGCCCCCTGAAATAG 60.874 57.143 0.00 0.00 0.00 1.73
23 24 1.141053 GACGATGCCCCCTGAAATAGT 59.859 52.381 0.00 0.00 0.00 2.12
24 25 1.141053 ACGATGCCCCCTGAAATAGTC 59.859 52.381 0.00 0.00 0.00 2.59
25 26 1.543429 CGATGCCCCCTGAAATAGTCC 60.543 57.143 0.00 0.00 0.00 3.85
26 27 1.777272 GATGCCCCCTGAAATAGTCCT 59.223 52.381 0.00 0.00 0.00 3.85
27 28 0.918983 TGCCCCCTGAAATAGTCCTG 59.081 55.000 0.00 0.00 0.00 3.86
28 29 0.919710 GCCCCCTGAAATAGTCCTGT 59.080 55.000 0.00 0.00 0.00 4.00
29 30 1.134068 GCCCCCTGAAATAGTCCTGTC 60.134 57.143 0.00 0.00 0.00 3.51
30 31 2.482494 CCCCCTGAAATAGTCCTGTCT 58.518 52.381 0.00 0.00 0.00 3.41
31 32 2.436173 CCCCCTGAAATAGTCCTGTCTC 59.564 54.545 0.00 0.00 0.00 3.36
32 33 3.379452 CCCCTGAAATAGTCCTGTCTCT 58.621 50.000 0.00 0.00 0.00 3.10
33 34 3.386402 CCCCTGAAATAGTCCTGTCTCTC 59.614 52.174 0.00 0.00 0.00 3.20
34 35 4.026744 CCCTGAAATAGTCCTGTCTCTCA 58.973 47.826 0.00 0.00 0.00 3.27
35 36 4.653341 CCCTGAAATAGTCCTGTCTCTCAT 59.347 45.833 0.00 0.00 0.00 2.90
36 37 5.221422 CCCTGAAATAGTCCTGTCTCTCATC 60.221 48.000 0.00 0.00 0.00 2.92
37 38 5.598005 CCTGAAATAGTCCTGTCTCTCATCT 59.402 44.000 0.00 0.00 0.00 2.90
38 39 6.239008 CCTGAAATAGTCCTGTCTCTCATCTC 60.239 46.154 0.00 0.00 0.00 2.75
39 40 6.430864 TGAAATAGTCCTGTCTCTCATCTCT 58.569 40.000 0.00 0.00 0.00 3.10
40 41 6.320926 TGAAATAGTCCTGTCTCTCATCTCTG 59.679 42.308 0.00 0.00 0.00 3.35
41 42 2.378038 AGTCCTGTCTCTCATCTCTGC 58.622 52.381 0.00 0.00 0.00 4.26
42 43 2.098614 GTCCTGTCTCTCATCTCTGCA 58.901 52.381 0.00 0.00 0.00 4.41
43 44 2.495270 GTCCTGTCTCTCATCTCTGCAA 59.505 50.000 0.00 0.00 0.00 4.08
44 45 3.056250 GTCCTGTCTCTCATCTCTGCAAA 60.056 47.826 0.00 0.00 0.00 3.68
45 46 3.056250 TCCTGTCTCTCATCTCTGCAAAC 60.056 47.826 0.00 0.00 0.00 2.93
46 47 2.922387 CTGTCTCTCATCTCTGCAAACG 59.078 50.000 0.00 0.00 0.00 3.60
47 48 2.558359 TGTCTCTCATCTCTGCAAACGA 59.442 45.455 0.00 0.00 0.00 3.85
48 49 2.920490 GTCTCTCATCTCTGCAAACGAC 59.080 50.000 0.00 0.00 0.00 4.34
49 50 2.822561 TCTCTCATCTCTGCAAACGACT 59.177 45.455 0.00 0.00 0.00 4.18
50 51 3.119673 TCTCTCATCTCTGCAAACGACTC 60.120 47.826 0.00 0.00 0.00 3.36
51 52 2.558359 TCTCATCTCTGCAAACGACTCA 59.442 45.455 0.00 0.00 0.00 3.41
52 53 2.922387 CTCATCTCTGCAAACGACTCAG 59.078 50.000 0.00 0.00 0.00 3.35
53 54 1.392853 CATCTCTGCAAACGACTCAGC 59.607 52.381 0.00 0.00 0.00 4.26
54 55 0.676184 TCTCTGCAAACGACTCAGCT 59.324 50.000 0.00 0.00 0.00 4.24
55 56 0.788995 CTCTGCAAACGACTCAGCTG 59.211 55.000 7.63 7.63 0.00 4.24
56 57 0.389025 TCTGCAAACGACTCAGCTGA 59.611 50.000 17.19 17.19 33.49 4.26
57 58 0.510359 CTGCAAACGACTCAGCTGAC 59.490 55.000 13.74 2.89 0.00 3.51
58 59 0.880278 TGCAAACGACTCAGCTGACC 60.880 55.000 13.74 6.81 0.00 4.02
59 60 1.891060 GCAAACGACTCAGCTGACCG 61.891 60.000 24.12 24.12 0.00 4.79
60 61 0.318699 CAAACGACTCAGCTGACCGA 60.319 55.000 29.45 6.70 0.00 4.69
61 62 0.387929 AAACGACTCAGCTGACCGAA 59.612 50.000 29.45 6.35 0.00 4.30
62 63 0.603569 AACGACTCAGCTGACCGAAT 59.396 50.000 29.45 19.00 0.00 3.34
63 64 0.603569 ACGACTCAGCTGACCGAATT 59.396 50.000 29.45 12.74 0.00 2.17
64 65 1.272781 CGACTCAGCTGACCGAATTC 58.727 55.000 22.39 8.59 0.00 2.17
65 66 1.646189 GACTCAGCTGACCGAATTCC 58.354 55.000 13.74 0.00 0.00 3.01
66 67 0.250513 ACTCAGCTGACCGAATTCCC 59.749 55.000 13.74 0.00 0.00 3.97
67 68 0.462759 CTCAGCTGACCGAATTCCCC 60.463 60.000 13.74 0.00 0.00 4.81
68 69 1.815421 CAGCTGACCGAATTCCCCG 60.815 63.158 8.42 0.00 0.00 5.73
69 70 1.987855 AGCTGACCGAATTCCCCGA 60.988 57.895 0.00 0.00 0.00 5.14
70 71 1.078708 GCTGACCGAATTCCCCGAA 60.079 57.895 0.00 0.00 0.00 4.30
71 72 1.366854 GCTGACCGAATTCCCCGAAC 61.367 60.000 0.00 0.00 0.00 3.95
72 73 0.249398 CTGACCGAATTCCCCGAACT 59.751 55.000 0.00 0.00 0.00 3.01
73 74 1.479323 CTGACCGAATTCCCCGAACTA 59.521 52.381 0.00 0.00 0.00 2.24
74 75 1.901159 TGACCGAATTCCCCGAACTAA 59.099 47.619 0.00 0.00 0.00 2.24
75 76 2.274437 GACCGAATTCCCCGAACTAAC 58.726 52.381 0.00 0.00 0.00 2.34
76 77 1.065926 ACCGAATTCCCCGAACTAACC 60.066 52.381 0.00 0.00 0.00 2.85
77 78 1.283736 CGAATTCCCCGAACTAACCG 58.716 55.000 0.00 0.00 0.00 4.44
78 79 1.135024 CGAATTCCCCGAACTAACCGA 60.135 52.381 0.00 0.00 0.00 4.69
79 80 2.274437 GAATTCCCCGAACTAACCGAC 58.726 52.381 0.00 0.00 0.00 4.79
80 81 1.565067 ATTCCCCGAACTAACCGACT 58.435 50.000 0.00 0.00 0.00 4.18
81 82 0.604578 TTCCCCGAACTAACCGACTG 59.395 55.000 0.00 0.00 0.00 3.51
82 83 0.251297 TCCCCGAACTAACCGACTGA 60.251 55.000 0.00 0.00 0.00 3.41
83 84 0.604578 CCCCGAACTAACCGACTGAA 59.395 55.000 0.00 0.00 0.00 3.02
84 85 1.206371 CCCCGAACTAACCGACTGAAT 59.794 52.381 0.00 0.00 0.00 2.57
85 86 2.428171 CCCCGAACTAACCGACTGAATA 59.572 50.000 0.00 0.00 0.00 1.75
86 87 3.490419 CCCCGAACTAACCGACTGAATAG 60.490 52.174 0.00 0.00 0.00 1.73
87 88 3.114065 CCGAACTAACCGACTGAATAGC 58.886 50.000 0.00 0.00 0.00 2.97
88 89 3.114065 CGAACTAACCGACTGAATAGCC 58.886 50.000 0.00 0.00 0.00 3.93
89 90 3.455327 GAACTAACCGACTGAATAGCCC 58.545 50.000 0.00 0.00 0.00 5.19
90 91 2.748388 ACTAACCGACTGAATAGCCCT 58.252 47.619 0.00 0.00 0.00 5.19
91 92 3.105283 ACTAACCGACTGAATAGCCCTT 58.895 45.455 0.00 0.00 0.00 3.95
92 93 2.693267 AACCGACTGAATAGCCCTTC 57.307 50.000 0.00 0.00 0.00 3.46
93 94 0.831307 ACCGACTGAATAGCCCTTCC 59.169 55.000 0.00 0.00 0.00 3.46
94 95 0.830648 CCGACTGAATAGCCCTTCCA 59.169 55.000 0.00 0.00 0.00 3.53
95 96 1.473434 CCGACTGAATAGCCCTTCCAC 60.473 57.143 0.00 0.00 0.00 4.02
96 97 1.802880 CGACTGAATAGCCCTTCCACG 60.803 57.143 0.00 0.00 0.00 4.94
97 98 0.541863 ACTGAATAGCCCTTCCACGG 59.458 55.000 0.00 0.00 0.00 4.94
98 99 0.541863 CTGAATAGCCCTTCCACGGT 59.458 55.000 0.00 0.00 0.00 4.83
99 100 1.760613 CTGAATAGCCCTTCCACGGTA 59.239 52.381 0.00 0.00 0.00 4.02
140 141 9.448294 GTGATACGTACAGAAAGTTATCCTTAG 57.552 37.037 0.00 0.00 31.48 2.18
190 191 2.359850 CGTGGCCCTTGCAGCTTA 60.360 61.111 0.00 0.00 40.13 3.09
191 192 1.750399 CGTGGCCCTTGCAGCTTAT 60.750 57.895 0.00 0.00 40.13 1.73
192 193 1.718757 CGTGGCCCTTGCAGCTTATC 61.719 60.000 0.00 0.00 40.13 1.75
193 194 1.076777 TGGCCCTTGCAGCTTATCC 60.077 57.895 0.00 0.00 40.13 2.59
194 195 1.829970 GGCCCTTGCAGCTTATCCC 60.830 63.158 0.00 0.00 40.13 3.85
195 196 1.228510 GCCCTTGCAGCTTATCCCT 59.771 57.895 0.00 0.00 37.47 4.20
196 197 1.105759 GCCCTTGCAGCTTATCCCTG 61.106 60.000 0.00 0.00 37.47 4.45
197 198 0.466922 CCCTTGCAGCTTATCCCTGG 60.467 60.000 0.00 0.00 0.00 4.45
198 199 0.257039 CCTTGCAGCTTATCCCTGGT 59.743 55.000 0.00 0.00 0.00 4.00
199 200 1.386533 CTTGCAGCTTATCCCTGGTG 58.613 55.000 0.00 0.00 35.12 4.17
200 201 0.034186 TTGCAGCTTATCCCTGGTGG 60.034 55.000 0.00 0.00 32.94 4.61
201 202 1.825622 GCAGCTTATCCCTGGTGGC 60.826 63.158 0.00 0.00 32.94 5.01
202 203 1.918253 CAGCTTATCCCTGGTGGCT 59.082 57.895 0.00 0.00 0.00 4.75
203 204 0.465097 CAGCTTATCCCTGGTGGCTG 60.465 60.000 0.00 0.00 40.52 4.85
204 205 1.152881 GCTTATCCCTGGTGGCTGG 60.153 63.158 0.00 0.00 0.00 4.85
205 206 1.926426 GCTTATCCCTGGTGGCTGGT 61.926 60.000 0.00 0.00 0.00 4.00
206 207 0.107017 CTTATCCCTGGTGGCTGGTG 60.107 60.000 0.00 0.00 0.00 4.17
207 208 2.210144 TTATCCCTGGTGGCTGGTGC 62.210 60.000 0.00 0.00 38.76 5.01
209 210 4.371417 CCCTGGTGGCTGGTGCAT 62.371 66.667 0.00 0.00 41.91 3.96
210 211 2.283388 CCTGGTGGCTGGTGCATT 60.283 61.111 0.00 0.00 41.91 3.56
211 212 2.345760 CCTGGTGGCTGGTGCATTC 61.346 63.158 0.00 0.00 41.91 2.67
233 234 3.059472 GACGCACGACATCACGCAG 62.059 63.158 0.00 0.00 36.70 5.18
234 235 4.489795 CGCACGACATCACGCAGC 62.490 66.667 0.00 0.00 36.70 5.25
268 269 1.847088 GCCTCCTCCTTTTCCACCTAT 59.153 52.381 0.00 0.00 0.00 2.57
341 398 2.408050 GCTTGCGTCCATATCCTACTG 58.592 52.381 0.00 0.00 0.00 2.74
356 413 5.208294 TCCTACTGTATGTCTTTCCTCCT 57.792 43.478 0.00 0.00 0.00 3.69
357 414 6.337185 TCCTACTGTATGTCTTTCCTCCTA 57.663 41.667 0.00 0.00 0.00 2.94
358 415 6.127793 TCCTACTGTATGTCTTTCCTCCTAC 58.872 44.000 0.00 0.00 0.00 3.18
359 416 5.892119 CCTACTGTATGTCTTTCCTCCTACA 59.108 44.000 0.00 0.00 0.00 2.74
360 417 5.923733 ACTGTATGTCTTTCCTCCTACAG 57.076 43.478 6.09 6.09 41.01 2.74
392 449 0.466922 ATGCTATGCAAGGGAGCCAC 60.467 55.000 9.84 0.00 43.62 5.01
426 483 2.933666 CCATATCACGCAGCGCAG 59.066 61.111 16.61 8.26 0.00 5.18
429 486 2.528743 ATATCACGCAGCGCAGTGC 61.529 57.895 16.61 16.66 46.98 4.40
471 528 4.600692 TCTGACCTTCATTGTTTCTCGA 57.399 40.909 0.00 0.00 0.00 4.04
493 553 6.479001 TCGAGAATTTGACTCCCGATTTATTC 59.521 38.462 0.00 0.00 0.00 1.75
525 585 6.692486 TCCAGTATGTTCTCTCTTCAAGTTC 58.308 40.000 0.00 0.00 0.00 3.01
577 637 2.233654 CGAGCCGAATTCTCGCTGG 61.234 63.158 18.44 14.29 45.32 4.85
586 646 0.741221 ATTCTCGCTGGACCGAAAGC 60.741 55.000 0.00 0.00 36.72 3.51
587 647 2.781595 TTCTCGCTGGACCGAAAGCC 62.782 60.000 0.00 0.00 36.72 4.35
588 648 3.302347 CTCGCTGGACCGAAAGCCT 62.302 63.158 0.00 0.00 36.72 4.58
589 649 2.815647 CGCTGGACCGAAAGCCTC 60.816 66.667 0.00 0.00 35.98 4.70
598 658 3.509388 CGAAAGCCTCGGTTAGTGT 57.491 52.632 0.00 0.00 44.20 3.55
599 659 1.792006 CGAAAGCCTCGGTTAGTGTT 58.208 50.000 0.00 0.00 44.20 3.32
600 660 2.140717 CGAAAGCCTCGGTTAGTGTTT 58.859 47.619 0.00 0.00 44.20 2.83
601 661 2.546789 CGAAAGCCTCGGTTAGTGTTTT 59.453 45.455 0.00 0.00 44.20 2.43
602 662 3.363673 CGAAAGCCTCGGTTAGTGTTTTC 60.364 47.826 0.00 0.00 44.20 2.29
603 663 3.487120 AAGCCTCGGTTAGTGTTTTCT 57.513 42.857 0.00 0.00 0.00 2.52
604 664 3.041508 AGCCTCGGTTAGTGTTTTCTC 57.958 47.619 0.00 0.00 0.00 2.87
605 665 1.725164 GCCTCGGTTAGTGTTTTCTCG 59.275 52.381 0.00 0.00 0.00 4.04
606 666 2.608752 GCCTCGGTTAGTGTTTTCTCGA 60.609 50.000 0.00 0.00 0.00 4.04
607 667 3.645884 CCTCGGTTAGTGTTTTCTCGAA 58.354 45.455 0.00 0.00 0.00 3.71
608 668 4.053295 CCTCGGTTAGTGTTTTCTCGAAA 58.947 43.478 0.00 0.00 0.00 3.46
609 669 4.508861 CCTCGGTTAGTGTTTTCTCGAAAA 59.491 41.667 0.93 0.93 37.90 2.29
610 670 5.006941 CCTCGGTTAGTGTTTTCTCGAAAAA 59.993 40.000 6.41 0.00 41.37 1.94
635 695 4.884668 AACCTCGGTTAGTGAATTCTCA 57.115 40.909 7.05 0.00 36.46 3.27
648 708 4.002982 TGAATTCTCACAAGACCAATCGG 58.997 43.478 7.05 0.00 38.77 4.18
690 750 4.095932 CCAAGTTAAAAATAGACCGAGGCC 59.904 45.833 0.00 0.00 0.00 5.19
692 752 3.264964 AGTTAAAAATAGACCGAGGCCCA 59.735 43.478 0.00 0.00 0.00 5.36
694 754 0.546598 AAAATAGACCGAGGCCCAGG 59.453 55.000 12.20 12.20 0.00 4.45
695 755 1.984288 AAATAGACCGAGGCCCAGGC 61.984 60.000 13.56 0.00 41.06 4.85
731 799 0.546122 TCCAGCGGCCATGTAAAGAT 59.454 50.000 2.24 0.00 0.00 2.40
742 810 3.181436 CCATGTAAAGATGGATCTGGGCT 60.181 47.826 0.00 0.00 45.24 5.19
767 835 3.935203 CTGACTCAATTAATCGTGTGGCT 59.065 43.478 0.00 0.00 0.00 4.75
783 851 2.571216 GCTCCTAAGGCGGCGGATA 61.571 63.158 9.78 0.00 0.00 2.59
1268 1558 8.895932 ATAACTGACGAATTAAATTGTTGAGC 57.104 30.769 0.00 0.00 0.00 4.26
1306 1603 8.565416 GTGTGTTTACTTGGATTATTATAGGGC 58.435 37.037 0.00 0.00 0.00 5.19
1310 1607 8.784043 GTTTACTTGGATTATTATAGGGCAGTG 58.216 37.037 0.00 0.00 0.00 3.66
1323 1620 0.524862 GGCAGTGCTGGTGAGAATTG 59.475 55.000 16.11 0.00 0.00 2.32
1336 1633 6.108687 TGGTGAGAATTGTACTAGCTGAATG 58.891 40.000 0.00 0.00 0.00 2.67
1346 1643 4.899352 ACTAGCTGAATGAACCTGAAGT 57.101 40.909 0.00 0.00 0.00 3.01
1349 1646 6.344500 ACTAGCTGAATGAACCTGAAGTATG 58.656 40.000 0.00 0.00 0.00 2.39
1350 1647 5.426689 AGCTGAATGAACCTGAAGTATGA 57.573 39.130 0.00 0.00 0.00 2.15
1359 1659 9.823647 AATGAACCTGAAGTATGACTATGTTAG 57.176 33.333 0.00 0.00 0.00 2.34
1372 1672 8.594881 ATGACTATGTTAGTACTTTATGCTGC 57.405 34.615 0.00 0.00 39.59 5.25
1384 1684 1.634757 TATGCTGCGTTTGGCTCGTG 61.635 55.000 0.00 0.00 44.05 4.35
1449 1755 6.428159 ACTGCTACAACCAAACTTAGAATCAG 59.572 38.462 0.00 0.00 0.00 2.90
1536 1846 4.157656 GGAATGCTTTATTACACTGCCACA 59.842 41.667 0.00 0.00 29.39 4.17
1537 1847 5.336372 GGAATGCTTTATTACACTGCCACAA 60.336 40.000 0.00 0.00 29.39 3.33
1538 1848 5.920193 ATGCTTTATTACACTGCCACAAT 57.080 34.783 0.00 0.00 0.00 2.71
1539 1849 5.720371 TGCTTTATTACACTGCCACAATT 57.280 34.783 0.00 0.00 0.00 2.32
1577 1893 5.121142 TGCGCTGTAGTAGTAACCAAATTTC 59.879 40.000 9.73 0.00 0.00 2.17
1690 2006 8.568617 ACACCCTCTGTTCCTAAATATAAGAT 57.431 34.615 0.00 0.00 0.00 2.40
2382 2747 6.037610 CACTGTTATCTCAATAGTTGGCTTCC 59.962 42.308 0.00 0.00 0.00 3.46
2621 2996 1.205893 AGCTAGAGTGCCTTCTTTCCG 59.794 52.381 0.00 0.00 0.00 4.30
2841 3217 4.321745 CGCATTGCAAGTAAAGAACATGAC 59.678 41.667 9.69 0.00 0.00 3.06
3376 3762 3.924686 ACAACCTAAAGAGCGTAACGATG 59.075 43.478 0.00 0.00 0.00 3.84
3505 3891 1.619827 TGTTCGGTCGATAAACCTGGT 59.380 47.619 0.00 0.00 37.15 4.00
3738 4124 8.911918 TTTAGTACAAGCAAGGAGAAATACAA 57.088 30.769 0.00 0.00 0.00 2.41
3739 4125 9.515226 TTTAGTACAAGCAAGGAGAAATACAAT 57.485 29.630 0.00 0.00 0.00 2.71
3741 4127 8.494016 AGTACAAGCAAGGAGAAATACAATAC 57.506 34.615 0.00 0.00 0.00 1.89
3742 4128 6.422776 ACAAGCAAGGAGAAATACAATACG 57.577 37.500 0.00 0.00 0.00 3.06
3743 4129 5.354234 ACAAGCAAGGAGAAATACAATACGG 59.646 40.000 0.00 0.00 0.00 4.02
3744 4130 4.451900 AGCAAGGAGAAATACAATACGGG 58.548 43.478 0.00 0.00 0.00 5.28
3745 4131 3.003378 GCAAGGAGAAATACAATACGGGC 59.997 47.826 0.00 0.00 0.00 6.13
3746 4132 3.487120 AGGAGAAATACAATACGGGCC 57.513 47.619 0.00 0.00 0.00 5.80
3747 4133 2.775384 AGGAGAAATACAATACGGGCCA 59.225 45.455 4.39 0.00 0.00 5.36
3748 4134 3.139077 GGAGAAATACAATACGGGCCAG 58.861 50.000 4.39 1.85 0.00 4.85
3749 4135 3.139077 GAGAAATACAATACGGGCCAGG 58.861 50.000 8.08 0.00 0.00 4.45
3750 4136 2.775384 AGAAATACAATACGGGCCAGGA 59.225 45.455 8.08 0.00 0.00 3.86
3751 4137 3.201266 AGAAATACAATACGGGCCAGGAA 59.799 43.478 8.08 0.00 0.00 3.36
3752 4138 3.876309 AATACAATACGGGCCAGGAAT 57.124 42.857 8.08 0.00 0.00 3.01
3753 4139 2.631160 TACAATACGGGCCAGGAATG 57.369 50.000 8.08 4.43 0.00 2.67
3754 4140 0.751643 ACAATACGGGCCAGGAATGC 60.752 55.000 8.08 0.00 0.00 3.56
3755 4141 0.751277 CAATACGGGCCAGGAATGCA 60.751 55.000 8.08 0.00 0.00 3.96
3756 4142 0.033601 AATACGGGCCAGGAATGCAA 60.034 50.000 8.08 0.00 0.00 4.08
3757 4143 0.185901 ATACGGGCCAGGAATGCAAT 59.814 50.000 8.08 0.00 0.00 3.56
3758 4144 0.033601 TACGGGCCAGGAATGCAATT 60.034 50.000 8.08 0.00 40.93 2.32
3759 4145 1.142314 CGGGCCAGGAATGCAATTG 59.858 57.895 4.39 0.00 36.07 2.32
3760 4146 1.321805 CGGGCCAGGAATGCAATTGA 61.322 55.000 10.34 0.00 36.07 2.57
3761 4147 0.903942 GGGCCAGGAATGCAATTGAA 59.096 50.000 10.34 0.00 36.07 2.69
3762 4148 1.278699 GGGCCAGGAATGCAATTGAAA 59.721 47.619 10.34 0.00 36.07 2.69
3847 4233 7.958674 TCATAAAAACAAAACACTTGTTCTGC 58.041 30.769 3.52 0.00 41.30 4.26
4171 4557 6.525578 TTTTCCACGTGATAGATAGACACT 57.474 37.500 19.30 0.00 33.13 3.55
4172 4558 7.634671 TTTTCCACGTGATAGATAGACACTA 57.365 36.000 19.30 0.00 33.13 2.74
4173 4559 6.862711 TTCCACGTGATAGATAGACACTAG 57.137 41.667 19.30 0.00 33.13 2.57
4174 4560 5.926663 TCCACGTGATAGATAGACACTAGT 58.073 41.667 19.30 0.00 33.13 2.57
4175 4561 5.758784 TCCACGTGATAGATAGACACTAGTG 59.241 44.000 21.44 21.44 33.13 2.74
4176 4562 5.444983 CACGTGATAGATAGACACTAGTGC 58.555 45.833 22.90 14.96 33.13 4.40
4177 4563 5.007724 CACGTGATAGATAGACACTAGTGCA 59.992 44.000 22.90 8.75 33.13 4.57
4178 4564 5.237561 ACGTGATAGATAGACACTAGTGCAG 59.762 44.000 22.90 0.00 33.13 4.41
4179 4565 5.467063 CGTGATAGATAGACACTAGTGCAGA 59.533 44.000 22.90 8.16 33.13 4.26
4180 4566 6.017852 CGTGATAGATAGACACTAGTGCAGAA 60.018 42.308 22.90 6.53 33.13 3.02
4181 4567 7.136119 GTGATAGATAGACACTAGTGCAGAAC 58.864 42.308 22.90 11.54 0.00 3.01
4182 4568 4.993029 AGATAGACACTAGTGCAGAACC 57.007 45.455 22.90 8.04 0.00 3.62
4183 4569 4.605183 AGATAGACACTAGTGCAGAACCT 58.395 43.478 22.90 10.11 0.00 3.50
4184 4570 4.400884 AGATAGACACTAGTGCAGAACCTG 59.599 45.833 22.90 0.00 34.12 4.00
4185 4571 1.620819 AGACACTAGTGCAGAACCTGG 59.379 52.381 22.90 0.00 31.21 4.45
4186 4572 0.035458 ACACTAGTGCAGAACCTGGC 59.965 55.000 22.90 0.00 31.21 4.85
4187 4573 0.322975 CACTAGTGCAGAACCTGGCT 59.677 55.000 10.54 0.00 31.21 4.75
4188 4574 1.059913 ACTAGTGCAGAACCTGGCTT 58.940 50.000 0.00 0.00 31.21 4.35
4189 4575 1.421646 ACTAGTGCAGAACCTGGCTTT 59.578 47.619 0.00 0.00 31.21 3.51
4190 4576 2.637872 ACTAGTGCAGAACCTGGCTTTA 59.362 45.455 0.00 0.00 31.21 1.85
4191 4577 2.191128 AGTGCAGAACCTGGCTTTAG 57.809 50.000 0.00 0.00 31.21 1.85
4192 4578 0.523519 GTGCAGAACCTGGCTTTAGC 59.476 55.000 0.00 0.00 41.14 3.09
4193 4579 0.955428 TGCAGAACCTGGCTTTAGCG 60.955 55.000 0.00 0.00 43.26 4.26
4194 4580 1.796796 CAGAACCTGGCTTTAGCGC 59.203 57.895 0.00 0.00 43.26 5.92
4211 4597 4.404098 CCGGTGCGTAAGGGCCTT 62.404 66.667 24.44 24.44 38.28 4.35
4212 4598 2.359478 CGGTGCGTAAGGGCCTTT 60.359 61.111 26.29 5.08 38.28 3.11
4213 4599 1.078988 CGGTGCGTAAGGGCCTTTA 60.079 57.895 26.29 2.60 38.28 1.85
4214 4600 1.087771 CGGTGCGTAAGGGCCTTTAG 61.088 60.000 26.29 19.06 38.28 1.85
4215 4601 0.035725 GGTGCGTAAGGGCCTTTAGT 60.036 55.000 26.29 1.50 38.28 2.24
4216 4602 1.084289 GTGCGTAAGGGCCTTTAGTG 58.916 55.000 26.29 12.73 38.28 2.74
4217 4603 0.688487 TGCGTAAGGGCCTTTAGTGT 59.312 50.000 26.29 0.13 38.28 3.55
4218 4604 1.338389 TGCGTAAGGGCCTTTAGTGTC 60.338 52.381 26.29 8.67 38.28 3.67
4219 4605 1.636988 CGTAAGGGCCTTTAGTGTCG 58.363 55.000 26.29 14.95 0.00 4.35
4220 4606 1.738030 CGTAAGGGCCTTTAGTGTCGG 60.738 57.143 26.29 1.40 0.00 4.79
4221 4607 1.277273 GTAAGGGCCTTTAGTGTCGGT 59.723 52.381 26.29 0.00 0.00 4.69
4222 4608 0.769247 AAGGGCCTTTAGTGTCGGTT 59.231 50.000 14.48 0.00 0.00 4.44
4223 4609 0.323957 AGGGCCTTTAGTGTCGGTTC 59.676 55.000 0.00 0.00 0.00 3.62
4224 4610 0.675837 GGGCCTTTAGTGTCGGTTCC 60.676 60.000 0.84 0.00 0.00 3.62
4225 4611 0.035739 GGCCTTTAGTGTCGGTTCCA 59.964 55.000 0.00 0.00 0.00 3.53
4226 4612 1.543871 GGCCTTTAGTGTCGGTTCCAA 60.544 52.381 0.00 0.00 0.00 3.53
4227 4613 2.223745 GCCTTTAGTGTCGGTTCCAAA 58.776 47.619 0.00 0.00 0.00 3.28
4228 4614 2.619646 GCCTTTAGTGTCGGTTCCAAAA 59.380 45.455 0.00 0.00 0.00 2.44
4229 4615 3.549423 GCCTTTAGTGTCGGTTCCAAAAC 60.549 47.826 0.00 0.00 34.46 2.43
4236 4622 3.850508 GGTTCCAAAACCGGCACT 58.149 55.556 0.00 0.00 45.33 4.40
4237 4623 3.024431 GGTTCCAAAACCGGCACTA 57.976 52.632 0.00 0.00 45.33 2.74
4238 4624 1.320507 GGTTCCAAAACCGGCACTAA 58.679 50.000 0.00 0.00 45.33 2.24
4239 4625 1.682323 GGTTCCAAAACCGGCACTAAA 59.318 47.619 0.00 0.00 45.33 1.85
4240 4626 2.287970 GGTTCCAAAACCGGCACTAAAG 60.288 50.000 0.00 0.00 45.33 1.85
4241 4627 2.619646 GTTCCAAAACCGGCACTAAAGA 59.380 45.455 0.00 0.00 0.00 2.52
4242 4628 2.500229 TCCAAAACCGGCACTAAAGAG 58.500 47.619 0.00 0.00 0.00 2.85
4243 4629 2.158726 TCCAAAACCGGCACTAAAGAGT 60.159 45.455 0.00 0.00 35.80 3.24
4256 4642 4.500452 ACTAAAGAGTGGGGACTAAAGGT 58.500 43.478 0.00 0.00 33.41 3.50
4257 4643 4.531339 ACTAAAGAGTGGGGACTAAAGGTC 59.469 45.833 0.00 0.00 38.17 3.85
4279 4665 4.792066 CCCCCTAGTACCGGTTCA 57.208 61.111 15.04 0.00 0.00 3.18
4280 4666 3.235628 CCCCCTAGTACCGGTTCAT 57.764 57.895 15.04 0.95 0.00 2.57
4281 4667 1.046204 CCCCCTAGTACCGGTTCATC 58.954 60.000 15.04 1.07 0.00 2.92
4282 4668 1.690209 CCCCCTAGTACCGGTTCATCA 60.690 57.143 15.04 0.00 0.00 3.07
4283 4669 2.326428 CCCCTAGTACCGGTTCATCAT 58.674 52.381 15.04 0.00 0.00 2.45
4284 4670 2.037251 CCCCTAGTACCGGTTCATCATG 59.963 54.545 15.04 0.00 0.00 3.07
4285 4671 2.963101 CCCTAGTACCGGTTCATCATGA 59.037 50.000 15.04 0.00 0.00 3.07
4286 4672 3.386726 CCCTAGTACCGGTTCATCATGAA 59.613 47.826 15.04 0.00 33.32 2.57
4293 4679 3.496711 TTCATCATGAACCGGCGC 58.503 55.556 0.00 0.00 30.26 6.53
4294 4680 1.078497 TTCATCATGAACCGGCGCT 60.078 52.632 7.64 0.00 30.26 5.92
4295 4681 0.176910 TTCATCATGAACCGGCGCTA 59.823 50.000 7.64 0.00 30.26 4.26
4296 4682 0.176910 TCATCATGAACCGGCGCTAA 59.823 50.000 7.64 0.00 0.00 3.09
4297 4683 1.013596 CATCATGAACCGGCGCTAAA 58.986 50.000 7.64 0.00 0.00 1.85
4298 4684 1.003545 CATCATGAACCGGCGCTAAAG 60.004 52.381 7.64 0.00 0.00 1.85
4299 4685 1.062525 CATGAACCGGCGCTAAAGC 59.937 57.895 7.64 0.00 37.78 3.51
4309 4695 3.047877 GCTAAAGCGCCACCACGT 61.048 61.111 2.29 0.00 34.88 4.49
4310 4696 2.860293 CTAAAGCGCCACCACGTG 59.140 61.111 9.08 9.08 34.88 4.49
4342 4728 4.988598 CGGGTGCGTGCAGGACTT 62.989 66.667 11.29 0.00 41.32 3.01
4343 4729 2.594592 GGGTGCGTGCAGGACTTT 60.595 61.111 11.29 0.00 41.32 2.66
4344 4730 1.302192 GGGTGCGTGCAGGACTTTA 60.302 57.895 11.29 0.00 41.32 1.85
4345 4731 1.298859 GGGTGCGTGCAGGACTTTAG 61.299 60.000 11.29 0.00 41.32 1.85
4346 4732 0.602905 GGTGCGTGCAGGACTTTAGT 60.603 55.000 11.29 0.00 41.32 2.24
4347 4733 1.337447 GGTGCGTGCAGGACTTTAGTA 60.337 52.381 11.29 0.00 41.32 1.82
4348 4734 1.725164 GTGCGTGCAGGACTTTAGTAC 59.275 52.381 11.29 0.00 38.25 2.73
4349 4735 1.337447 TGCGTGCAGGACTTTAGTACC 60.337 52.381 11.29 0.00 0.00 3.34
4350 4736 1.625616 CGTGCAGGACTTTAGTACCG 58.374 55.000 0.00 0.00 0.00 4.02
4351 4737 1.734707 CGTGCAGGACTTTAGTACCGG 60.735 57.143 0.00 0.00 0.00 5.28
4352 4738 1.274447 GTGCAGGACTTTAGTACCGGT 59.726 52.381 13.98 13.98 0.00 5.28
4353 4739 1.972795 TGCAGGACTTTAGTACCGGTT 59.027 47.619 15.04 0.00 0.00 4.44
4354 4740 2.289195 TGCAGGACTTTAGTACCGGTTG 60.289 50.000 15.04 0.89 0.00 3.77
4355 4741 2.933928 GCAGGACTTTAGTACCGGTTGG 60.934 54.545 15.04 0.00 42.84 3.77
4374 4760 3.676291 GGTAACACCAACCGGTACTAA 57.324 47.619 8.00 0.00 46.94 2.24
4375 4761 4.001618 GGTAACACCAACCGGTACTAAA 57.998 45.455 8.00 0.00 46.94 1.85
4376 4762 4.578871 GGTAACACCAACCGGTACTAAAT 58.421 43.478 8.00 0.00 46.94 1.40
4377 4763 5.729510 GGTAACACCAACCGGTACTAAATA 58.270 41.667 8.00 0.00 46.94 1.40
4378 4764 6.348498 GGTAACACCAACCGGTACTAAATAT 58.652 40.000 8.00 0.00 46.94 1.28
4379 4765 6.823182 GGTAACACCAACCGGTACTAAATATT 59.177 38.462 8.00 0.00 46.94 1.28
4380 4766 7.336679 GGTAACACCAACCGGTACTAAATATTT 59.663 37.037 8.00 5.89 46.94 1.40
4381 4767 6.746745 ACACCAACCGGTACTAAATATTTG 57.253 37.500 8.00 0.00 46.94 2.32
4382 4768 5.648960 ACACCAACCGGTACTAAATATTTGG 59.351 40.000 8.00 10.60 46.94 3.28
4383 4769 5.066764 CACCAACCGGTACTAAATATTTGGG 59.933 44.000 8.00 8.51 46.94 4.12
4384 4770 4.581409 CCAACCGGTACTAAATATTTGGGG 59.419 45.833 8.00 9.13 30.58 4.96
4385 4771 4.442401 ACCGGTACTAAATATTTGGGGG 57.558 45.455 4.49 12.10 0.00 5.40
4482 4868 9.787435 TGTTAAATCATTAGGTGAAAGTACTGT 57.213 29.630 0.00 0.00 40.97 3.55
4494 4880 9.490379 AGGTGAAAGTACTGTAGATTAGTTTTG 57.510 33.333 0.00 0.00 0.00 2.44
4495 4881 9.485206 GGTGAAAGTACTGTAGATTAGTTTTGA 57.515 33.333 0.00 0.00 0.00 2.69
4499 4885 9.490379 AAAGTACTGTAGATTAGTTTTGACTGG 57.510 33.333 0.00 0.00 0.00 4.00
4500 4886 8.418597 AGTACTGTAGATTAGTTTTGACTGGA 57.581 34.615 0.00 0.00 0.00 3.86
4501 4887 9.036980 AGTACTGTAGATTAGTTTTGACTGGAT 57.963 33.333 0.00 0.00 0.00 3.41
4502 4888 9.088512 GTACTGTAGATTAGTTTTGACTGGATG 57.911 37.037 0.00 0.00 0.00 3.51
4503 4889 7.680730 ACTGTAGATTAGTTTTGACTGGATGT 58.319 34.615 0.00 0.00 0.00 3.06
4504 4890 8.812972 ACTGTAGATTAGTTTTGACTGGATGTA 58.187 33.333 0.00 0.00 0.00 2.29
4505 4891 9.823647 CTGTAGATTAGTTTTGACTGGATGTAT 57.176 33.333 0.00 0.00 0.00 2.29
4506 4892 9.599866 TGTAGATTAGTTTTGACTGGATGTATG 57.400 33.333 0.00 0.00 0.00 2.39
4507 4893 9.601217 GTAGATTAGTTTTGACTGGATGTATGT 57.399 33.333 0.00 0.00 0.00 2.29
4508 4894 8.498054 AGATTAGTTTTGACTGGATGTATGTG 57.502 34.615 0.00 0.00 0.00 3.21
4509 4895 7.554118 AGATTAGTTTTGACTGGATGTATGTGG 59.446 37.037 0.00 0.00 0.00 4.17
4510 4896 5.241403 AGTTTTGACTGGATGTATGTGGA 57.759 39.130 0.00 0.00 0.00 4.02
4511 4897 5.819991 AGTTTTGACTGGATGTATGTGGAT 58.180 37.500 0.00 0.00 0.00 3.41
4512 4898 5.882557 AGTTTTGACTGGATGTATGTGGATC 59.117 40.000 0.00 0.00 0.00 3.36
4513 4899 4.422073 TTGACTGGATGTATGTGGATCC 57.578 45.455 4.20 4.20 38.98 3.36
4514 4900 3.657610 TGACTGGATGTATGTGGATCCT 58.342 45.455 14.23 0.00 39.23 3.24
4515 4901 4.814967 TGACTGGATGTATGTGGATCCTA 58.185 43.478 14.23 2.20 39.23 2.94
4516 4902 5.406163 TGACTGGATGTATGTGGATCCTAT 58.594 41.667 14.23 10.07 39.23 2.57
4517 4903 6.561294 TGACTGGATGTATGTGGATCCTATA 58.439 40.000 14.23 9.06 39.23 1.31
4518 4904 6.665248 TGACTGGATGTATGTGGATCCTATAG 59.335 42.308 14.23 3.75 39.23 1.31
4519 4905 5.423610 ACTGGATGTATGTGGATCCTATAGC 59.576 44.000 14.23 0.00 39.23 2.97
4520 4906 5.593786 TGGATGTATGTGGATCCTATAGCT 58.406 41.667 14.23 0.00 39.23 3.32
4521 4907 6.741724 TGGATGTATGTGGATCCTATAGCTA 58.258 40.000 14.23 0.00 39.23 3.32
4522 4908 6.836007 TGGATGTATGTGGATCCTATAGCTAG 59.164 42.308 14.23 0.00 39.23 3.42
4523 4909 6.239176 GGATGTATGTGGATCCTATAGCTAGC 60.239 46.154 14.23 6.62 36.04 3.42
4524 4910 5.832221 TGTATGTGGATCCTATAGCTAGCT 58.168 41.667 23.12 23.12 0.00 3.32
4525 4911 6.970191 TGTATGTGGATCCTATAGCTAGCTA 58.030 40.000 26.09 26.09 0.00 3.32
4526 4912 7.410991 TGTATGTGGATCCTATAGCTAGCTAA 58.589 38.462 27.47 12.24 31.73 3.09
4527 4913 8.061920 TGTATGTGGATCCTATAGCTAGCTAAT 58.938 37.037 27.47 16.48 31.73 1.73
4528 4914 7.986553 ATGTGGATCCTATAGCTAGCTAATT 57.013 36.000 27.47 15.11 31.73 1.40
4530 4916 8.895141 TGTGGATCCTATAGCTAGCTAATTAA 57.105 34.615 27.47 14.27 31.73 1.40
4531 4917 8.972127 TGTGGATCCTATAGCTAGCTAATTAAG 58.028 37.037 27.47 19.93 31.73 1.85
4532 4918 8.973182 GTGGATCCTATAGCTAGCTAATTAAGT 58.027 37.037 27.47 12.95 31.73 2.24
4533 4919 8.972127 TGGATCCTATAGCTAGCTAATTAAGTG 58.028 37.037 27.47 14.95 31.73 3.16
4534 4920 9.191479 GGATCCTATAGCTAGCTAATTAAGTGA 57.809 37.037 27.47 18.47 31.73 3.41
4537 4923 9.755122 TCCTATAGCTAGCTAATTAAGTGATCA 57.245 33.333 27.47 2.85 31.73 2.92
4555 4941 9.970553 AAGTGATCAAGTATATGCAATATCCAT 57.029 29.630 0.00 0.00 39.18 3.41
4607 4993 9.836864 GTGATCAAGTATAATATGGATATGGCA 57.163 33.333 0.00 0.00 0.00 4.92
4621 5007 7.500629 TGGATATGGCATATAGTTGATCACT 57.499 36.000 19.51 0.00 39.87 3.41
4622 5008 7.921304 TGGATATGGCATATAGTTGATCACTT 58.079 34.615 19.51 0.00 36.88 3.16
4623 5009 9.045745 TGGATATGGCATATAGTTGATCACTTA 57.954 33.333 19.51 0.00 36.88 2.24
4624 5010 9.539825 GGATATGGCATATAGTTGATCACTTAG 57.460 37.037 19.51 0.00 36.88 2.18
4625 5011 8.954950 ATATGGCATATAGTTGATCACTTAGC 57.045 34.615 18.17 0.00 36.88 3.09
4626 5012 6.425210 TGGCATATAGTTGATCACTTAGCT 57.575 37.500 0.00 0.00 36.88 3.32
4627 5013 7.539034 TGGCATATAGTTGATCACTTAGCTA 57.461 36.000 0.00 0.00 36.88 3.32
4628 5014 7.606349 TGGCATATAGTTGATCACTTAGCTAG 58.394 38.462 0.00 0.00 36.88 3.42
4629 5015 7.038659 GGCATATAGTTGATCACTTAGCTAGG 58.961 42.308 0.48 0.48 36.88 3.02
4630 5016 7.093727 GGCATATAGTTGATCACTTAGCTAGGA 60.094 40.741 10.24 2.14 36.88 2.94
4631 5017 8.474025 GCATATAGTTGATCACTTAGCTAGGAT 58.526 37.037 10.24 7.07 36.88 3.24
4633 5019 5.799827 AGTTGATCACTTAGCTAGGATCC 57.200 43.478 20.38 2.48 36.24 3.36
4634 5020 5.211973 AGTTGATCACTTAGCTAGGATCCA 58.788 41.667 15.82 12.41 36.24 3.41
4635 5021 5.843421 AGTTGATCACTTAGCTAGGATCCAT 59.157 40.000 15.82 1.47 36.24 3.41
4636 5022 5.991933 TGATCACTTAGCTAGGATCCATC 57.008 43.478 15.82 4.53 36.24 3.51
4637 5023 8.886717 AGTTGATCACTTAGCTAGGATCCATCC 61.887 44.444 15.82 0.64 38.97 3.51
4651 5037 6.809630 GGATCCATCCAGCTTAAACTAATC 57.190 41.667 6.95 0.00 46.38 1.75
4652 5038 6.538263 GGATCCATCCAGCTTAAACTAATCT 58.462 40.000 6.95 0.00 46.38 2.40
4653 5039 6.429385 GGATCCATCCAGCTTAAACTAATCTG 59.571 42.308 6.95 0.00 46.38 2.90
4654 5040 5.126067 TCCATCCAGCTTAAACTAATCTGC 58.874 41.667 0.00 0.00 32.19 4.26
4655 5041 4.024556 CCATCCAGCTTAAACTAATCTGCG 60.025 45.833 0.00 0.00 32.19 5.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 3.840102 TATTTCAGGGGGCATCGTCGC 62.840 57.143 0.00 0.00 0.00 5.19
2 3 0.105964 TATTTCAGGGGGCATCGTCG 59.894 55.000 0.00 0.00 0.00 5.12
3 4 1.141053 ACTATTTCAGGGGGCATCGTC 59.859 52.381 0.00 0.00 0.00 4.20
4 5 1.141053 GACTATTTCAGGGGGCATCGT 59.859 52.381 0.00 0.00 0.00 3.73
5 6 1.543429 GGACTATTTCAGGGGGCATCG 60.543 57.143 0.00 0.00 0.00 3.84
6 7 1.777272 AGGACTATTTCAGGGGGCATC 59.223 52.381 0.00 0.00 0.00 3.91
7 8 1.496429 CAGGACTATTTCAGGGGGCAT 59.504 52.381 0.00 0.00 0.00 4.40
8 9 0.918983 CAGGACTATTTCAGGGGGCA 59.081 55.000 0.00 0.00 0.00 5.36
9 10 0.919710 ACAGGACTATTTCAGGGGGC 59.080 55.000 0.00 0.00 0.00 5.80
10 11 2.436173 GAGACAGGACTATTTCAGGGGG 59.564 54.545 0.00 0.00 0.00 5.40
11 12 3.379452 AGAGACAGGACTATTTCAGGGG 58.621 50.000 0.00 0.00 0.00 4.79
12 13 4.026744 TGAGAGACAGGACTATTTCAGGG 58.973 47.826 0.00 0.00 0.00 4.45
13 14 5.598005 AGATGAGAGACAGGACTATTTCAGG 59.402 44.000 0.00 0.00 0.00 3.86
14 15 6.547141 AGAGATGAGAGACAGGACTATTTCAG 59.453 42.308 0.00 0.00 0.00 3.02
15 16 6.320926 CAGAGATGAGAGACAGGACTATTTCA 59.679 42.308 0.00 0.00 0.00 2.69
16 17 6.735694 GCAGAGATGAGAGACAGGACTATTTC 60.736 46.154 0.00 0.00 0.00 2.17
17 18 5.068987 GCAGAGATGAGAGACAGGACTATTT 59.931 44.000 0.00 0.00 0.00 1.40
18 19 4.584325 GCAGAGATGAGAGACAGGACTATT 59.416 45.833 0.00 0.00 0.00 1.73
19 20 4.144297 GCAGAGATGAGAGACAGGACTAT 58.856 47.826 0.00 0.00 0.00 2.12
20 21 3.054065 TGCAGAGATGAGAGACAGGACTA 60.054 47.826 0.00 0.00 0.00 2.59
21 22 2.291475 TGCAGAGATGAGAGACAGGACT 60.291 50.000 0.00 0.00 0.00 3.85
22 23 2.098614 TGCAGAGATGAGAGACAGGAC 58.901 52.381 0.00 0.00 0.00 3.85
23 24 2.521547 TGCAGAGATGAGAGACAGGA 57.478 50.000 0.00 0.00 0.00 3.86
24 25 3.260740 GTTTGCAGAGATGAGAGACAGG 58.739 50.000 0.00 0.00 0.00 4.00
25 26 2.922387 CGTTTGCAGAGATGAGAGACAG 59.078 50.000 0.00 0.00 0.00 3.51
26 27 2.558359 TCGTTTGCAGAGATGAGAGACA 59.442 45.455 0.00 0.00 0.00 3.41
27 28 2.920490 GTCGTTTGCAGAGATGAGAGAC 59.080 50.000 0.00 0.00 0.00 3.36
28 29 2.822561 AGTCGTTTGCAGAGATGAGAGA 59.177 45.455 0.00 0.00 0.00 3.10
29 30 3.178267 GAGTCGTTTGCAGAGATGAGAG 58.822 50.000 0.00 0.00 0.00 3.20
30 31 2.558359 TGAGTCGTTTGCAGAGATGAGA 59.442 45.455 0.00 0.00 0.00 3.27
31 32 2.922387 CTGAGTCGTTTGCAGAGATGAG 59.078 50.000 0.00 0.00 0.00 2.90
32 33 2.928301 GCTGAGTCGTTTGCAGAGATGA 60.928 50.000 0.00 0.00 0.00 2.92
33 34 1.392853 GCTGAGTCGTTTGCAGAGATG 59.607 52.381 0.00 0.00 0.00 2.90
34 35 1.274728 AGCTGAGTCGTTTGCAGAGAT 59.725 47.619 0.00 0.00 0.00 2.75
35 36 0.676184 AGCTGAGTCGTTTGCAGAGA 59.324 50.000 0.00 0.00 0.00 3.10
36 37 0.788995 CAGCTGAGTCGTTTGCAGAG 59.211 55.000 8.42 0.00 0.00 3.35
37 38 0.389025 TCAGCTGAGTCGTTTGCAGA 59.611 50.000 13.74 0.00 0.00 4.26
38 39 0.510359 GTCAGCTGAGTCGTTTGCAG 59.490 55.000 18.89 0.00 0.00 4.41
39 40 0.880278 GGTCAGCTGAGTCGTTTGCA 60.880 55.000 18.89 0.00 0.00 4.08
40 41 1.862806 GGTCAGCTGAGTCGTTTGC 59.137 57.895 18.89 2.00 0.00 3.68
41 42 0.318699 TCGGTCAGCTGAGTCGTTTG 60.319 55.000 27.66 11.46 0.00 2.93
42 43 0.387929 TTCGGTCAGCTGAGTCGTTT 59.612 50.000 27.66 0.00 0.00 3.60
43 44 0.603569 ATTCGGTCAGCTGAGTCGTT 59.396 50.000 27.66 18.52 0.00 3.85
44 45 0.603569 AATTCGGTCAGCTGAGTCGT 59.396 50.000 27.66 14.54 0.00 4.34
45 46 1.272781 GAATTCGGTCAGCTGAGTCG 58.727 55.000 24.96 24.96 0.00 4.18
46 47 1.646189 GGAATTCGGTCAGCTGAGTC 58.354 55.000 18.89 11.71 0.00 3.36
47 48 0.250513 GGGAATTCGGTCAGCTGAGT 59.749 55.000 18.89 0.00 0.00 3.41
48 49 0.462759 GGGGAATTCGGTCAGCTGAG 60.463 60.000 18.89 6.65 0.00 3.35
49 50 1.602237 GGGGAATTCGGTCAGCTGA 59.398 57.895 13.74 13.74 0.00 4.26
50 51 1.815421 CGGGGAATTCGGTCAGCTG 60.815 63.158 7.63 7.63 0.00 4.24
51 52 1.550130 TTCGGGGAATTCGGTCAGCT 61.550 55.000 0.00 0.00 0.00 4.24
52 53 1.078708 TTCGGGGAATTCGGTCAGC 60.079 57.895 0.00 0.00 0.00 4.26
53 54 0.249398 AGTTCGGGGAATTCGGTCAG 59.751 55.000 0.00 0.00 0.00 3.51
54 55 1.559368 TAGTTCGGGGAATTCGGTCA 58.441 50.000 0.00 0.00 0.00 4.02
55 56 2.274437 GTTAGTTCGGGGAATTCGGTC 58.726 52.381 0.00 0.00 0.00 4.79
56 57 1.065926 GGTTAGTTCGGGGAATTCGGT 60.066 52.381 0.00 0.00 0.00 4.69
57 58 1.660167 GGTTAGTTCGGGGAATTCGG 58.340 55.000 0.00 0.00 0.00 4.30
58 59 1.135024 TCGGTTAGTTCGGGGAATTCG 60.135 52.381 0.00 0.00 0.00 3.34
59 60 2.093816 AGTCGGTTAGTTCGGGGAATTC 60.094 50.000 0.00 0.00 0.00 2.17
60 61 1.904537 AGTCGGTTAGTTCGGGGAATT 59.095 47.619 0.00 0.00 0.00 2.17
61 62 1.206371 CAGTCGGTTAGTTCGGGGAAT 59.794 52.381 0.00 0.00 0.00 3.01
62 63 0.604578 CAGTCGGTTAGTTCGGGGAA 59.395 55.000 0.00 0.00 0.00 3.97
63 64 0.251297 TCAGTCGGTTAGTTCGGGGA 60.251 55.000 0.00 0.00 0.00 4.81
64 65 0.604578 TTCAGTCGGTTAGTTCGGGG 59.395 55.000 0.00 0.00 0.00 5.73
65 66 2.667473 ATTCAGTCGGTTAGTTCGGG 57.333 50.000 0.00 0.00 0.00 5.14
66 67 3.114065 GCTATTCAGTCGGTTAGTTCGG 58.886 50.000 0.00 0.00 0.00 4.30
67 68 3.114065 GGCTATTCAGTCGGTTAGTTCG 58.886 50.000 0.00 0.00 0.00 3.95
68 69 3.132467 AGGGCTATTCAGTCGGTTAGTTC 59.868 47.826 0.00 0.00 0.00 3.01
69 70 3.105283 AGGGCTATTCAGTCGGTTAGTT 58.895 45.455 0.00 0.00 0.00 2.24
70 71 2.748388 AGGGCTATTCAGTCGGTTAGT 58.252 47.619 0.00 0.00 0.00 2.24
71 72 3.492829 GGAAGGGCTATTCAGTCGGTTAG 60.493 52.174 5.58 0.00 0.00 2.34
72 73 2.433239 GGAAGGGCTATTCAGTCGGTTA 59.567 50.000 5.58 0.00 0.00 2.85
73 74 1.209747 GGAAGGGCTATTCAGTCGGTT 59.790 52.381 5.58 0.00 0.00 4.44
74 75 0.831307 GGAAGGGCTATTCAGTCGGT 59.169 55.000 5.58 0.00 0.00 4.69
75 76 0.830648 TGGAAGGGCTATTCAGTCGG 59.169 55.000 5.58 0.00 0.00 4.79
76 77 1.802880 CGTGGAAGGGCTATTCAGTCG 60.803 57.143 5.58 3.62 0.00 4.18
77 78 1.473434 CCGTGGAAGGGCTATTCAGTC 60.473 57.143 5.58 0.00 33.71 3.51
78 79 0.541863 CCGTGGAAGGGCTATTCAGT 59.458 55.000 5.58 0.00 33.71 3.41
79 80 3.386543 CCGTGGAAGGGCTATTCAG 57.613 57.895 5.58 0.00 33.71 3.02
113 114 6.803642 AGGATAACTTTCTGTACGTATCACC 58.196 40.000 0.00 0.00 0.00 4.02
182 183 1.609239 CCACCAGGGATAAGCTGCA 59.391 57.895 1.02 0.00 40.01 4.41
187 188 0.107017 CACCAGCCACCAGGGATAAG 60.107 60.000 0.00 0.00 40.01 1.73
188 189 1.998530 CACCAGCCACCAGGGATAA 59.001 57.895 0.00 0.00 40.01 1.75
189 190 2.679342 GCACCAGCCACCAGGGATA 61.679 63.158 0.00 0.00 40.01 2.59
190 191 4.052518 GCACCAGCCACCAGGGAT 62.053 66.667 0.00 0.00 40.01 3.85
192 193 3.892104 AATGCACCAGCCACCAGGG 62.892 63.158 0.00 0.00 41.13 4.45
193 194 2.283388 AATGCACCAGCCACCAGG 60.283 61.111 0.00 0.00 41.13 4.45
194 195 2.345760 GGAATGCACCAGCCACCAG 61.346 63.158 0.00 0.00 41.13 4.00
195 196 2.283101 GGAATGCACCAGCCACCA 60.283 61.111 0.00 0.00 41.13 4.17
196 197 1.607467 AAGGAATGCACCAGCCACC 60.607 57.895 0.00 0.00 41.13 4.61
197 198 0.895100 TCAAGGAATGCACCAGCCAC 60.895 55.000 0.00 0.00 41.13 5.01
198 199 0.895100 GTCAAGGAATGCACCAGCCA 60.895 55.000 0.00 0.00 41.13 4.75
199 200 1.885871 GTCAAGGAATGCACCAGCC 59.114 57.895 0.00 0.00 41.13 4.85
200 201 1.503542 CGTCAAGGAATGCACCAGC 59.496 57.895 0.00 0.00 42.57 4.85
201 202 1.236616 TGCGTCAAGGAATGCACCAG 61.237 55.000 0.00 0.00 31.31 4.00
202 203 1.228094 TGCGTCAAGGAATGCACCA 60.228 52.632 0.00 0.00 31.31 4.17
203 204 3.667087 TGCGTCAAGGAATGCACC 58.333 55.556 0.00 0.00 31.31 5.01
205 206 1.301322 TCGTGCGTCAAGGAATGCA 60.301 52.632 0.00 0.00 34.44 3.96
206 207 1.132640 GTCGTGCGTCAAGGAATGC 59.867 57.895 0.00 0.00 0.00 3.56
207 208 1.061131 GATGTCGTGCGTCAAGGAATG 59.939 52.381 0.00 0.00 33.40 2.67
208 209 1.337728 TGATGTCGTGCGTCAAGGAAT 60.338 47.619 3.01 0.00 39.93 3.01
209 210 0.032815 TGATGTCGTGCGTCAAGGAA 59.967 50.000 3.01 0.00 39.93 3.36
210 211 0.666274 GTGATGTCGTGCGTCAAGGA 60.666 55.000 6.30 0.00 43.96 3.36
211 212 1.781555 GTGATGTCGTGCGTCAAGG 59.218 57.895 6.30 0.00 43.96 3.61
252 253 1.209504 TGCGATAGGTGGAAAAGGAGG 59.790 52.381 0.00 0.00 0.00 4.30
253 254 2.691409 TGCGATAGGTGGAAAAGGAG 57.309 50.000 0.00 0.00 0.00 3.69
254 255 3.541632 GATTGCGATAGGTGGAAAAGGA 58.458 45.455 0.00 0.00 0.00 3.36
341 398 5.655532 TGGTACTGTAGGAGGAAAGACATAC 59.344 44.000 0.00 0.00 0.00 2.39
356 413 6.873605 GCATAGCATACATGAATGGTACTGTA 59.126 38.462 0.00 0.00 41.27 2.74
357 414 5.702670 GCATAGCATACATGAATGGTACTGT 59.297 40.000 0.00 0.00 41.27 3.55
358 415 5.702209 TGCATAGCATACATGAATGGTACTG 59.298 40.000 0.00 1.45 41.27 2.74
359 416 5.868454 TGCATAGCATACATGAATGGTACT 58.132 37.500 0.00 0.00 41.27 2.73
360 417 6.348786 CCTTGCATAGCATACATGAATGGTAC 60.349 42.308 0.00 0.00 41.27 3.34
392 449 3.267860 GCTCAATCAGGCCGCTCG 61.268 66.667 0.00 0.00 0.00 5.03
426 483 2.159627 AGAAATCGATCCAAACGTGCAC 59.840 45.455 6.82 6.82 0.00 4.57
429 486 5.565259 CAGAAAAGAAATCGATCCAAACGTG 59.435 40.000 0.00 0.00 0.00 4.49
471 528 6.663734 AGGAATAAATCGGGAGTCAAATTCT 58.336 36.000 0.00 0.00 0.00 2.40
493 553 3.639094 AGAGAACATACTGGATCGGAAGG 59.361 47.826 0.00 0.00 0.00 3.46
586 646 3.293311 TCGAGAAAACACTAACCGAGG 57.707 47.619 0.00 0.00 0.00 4.63
587 647 5.646467 TTTTCGAGAAAACACTAACCGAG 57.354 39.130 6.89 0.00 35.57 4.63
611 671 6.059484 TGAGAATTCACTAACCGAGGTTTTT 58.941 36.000 13.18 0.00 39.31 1.94
612 672 5.617252 TGAGAATTCACTAACCGAGGTTTT 58.383 37.500 13.18 0.00 39.31 2.43
613 673 5.223449 TGAGAATTCACTAACCGAGGTTT 57.777 39.130 13.18 0.00 39.31 3.27
614 674 4.884668 TGAGAATTCACTAACCGAGGTT 57.115 40.909 12.54 12.54 41.65 3.50
643 703 6.322969 GGGTTTCCTAATTTTATGGACCGATT 59.677 38.462 0.00 0.00 0.00 3.34
644 704 5.831525 GGGTTTCCTAATTTTATGGACCGAT 59.168 40.000 0.00 0.00 0.00 4.18
647 707 6.439375 ACTTGGGTTTCCTAATTTTATGGACC 59.561 38.462 0.00 0.00 0.00 4.46
648 708 7.476540 ACTTGGGTTTCCTAATTTTATGGAC 57.523 36.000 0.00 0.00 0.00 4.02
731 799 0.252421 AGTCAGACAGCCCAGATCCA 60.252 55.000 2.66 0.00 0.00 3.41
742 810 4.929211 CCACACGATTAATTGAGTCAGACA 59.071 41.667 9.79 0.00 0.00 3.41
767 835 1.001633 GAAATATCCGCCGCCTTAGGA 59.998 52.381 0.69 0.00 38.56 2.94
783 851 6.149474 CGTAAGTCAGGTGAAGATTTGGAAAT 59.851 38.462 0.00 0.00 0.00 2.17
889 958 3.324930 TGCAGGCCAGGGTCTCTG 61.325 66.667 5.01 0.00 43.00 3.35
1042 1176 1.254954 GTACCGTGTGGAGTTCTCCT 58.745 55.000 18.07 1.64 39.21 3.69
1090 1380 7.978414 ACATAAGTCACAATGAGAGTACATCAG 59.022 37.037 6.88 0.00 0.00 2.90
1268 1558 7.923344 TCCAAGTAAACACACAATGGTATTTTG 59.077 33.333 0.00 0.00 32.46 2.44
1306 1603 3.668447 AGTACAATTCTCACCAGCACTG 58.332 45.455 0.00 0.00 0.00 3.66
1310 1607 3.868077 CAGCTAGTACAATTCTCACCAGC 59.132 47.826 0.00 0.00 0.00 4.85
1323 1620 5.725362 ACTTCAGGTTCATTCAGCTAGTAC 58.275 41.667 0.00 0.00 0.00 2.73
1336 1633 9.733219 GTACTAACATAGTCATACTTCAGGTTC 57.267 37.037 0.00 0.00 40.14 3.62
1346 1643 9.692749 GCAGCATAAAGTACTAACATAGTCATA 57.307 33.333 0.00 0.00 40.14 2.15
1349 1646 6.696148 ACGCAGCATAAAGTACTAACATAGTC 59.304 38.462 0.00 0.00 40.14 2.59
1350 1647 6.570692 ACGCAGCATAAAGTACTAACATAGT 58.429 36.000 0.00 0.00 42.68 2.12
1359 1659 2.161609 AGCCAAACGCAGCATAAAGTAC 59.838 45.455 0.00 0.00 41.38 2.73
1384 1684 0.037590 TATTGTGGTGGTGGAGTGGC 59.962 55.000 0.00 0.00 0.00 5.01
1388 1688 4.021102 AGAAAGTATTGTGGTGGTGGAG 57.979 45.455 0.00 0.00 0.00 3.86
1449 1755 3.195825 ACTCCGAATATGCATACCTAGCC 59.804 47.826 8.99 0.00 0.00 3.93
1536 1846 4.096732 GCGCAAGGTCTCAACATTAATT 57.903 40.909 0.30 0.00 38.28 1.40
1537 1847 3.764885 GCGCAAGGTCTCAACATTAAT 57.235 42.857 0.30 0.00 38.28 1.40
1690 2006 4.705337 AGACGTTTAAACTGCCAAAACA 57.295 36.364 16.01 0.00 33.67 2.83
2841 3217 4.996758 TGGGCTGATATGAACACATTATCG 59.003 41.667 0.00 0.00 0.00 2.92
3239 3625 4.748102 GTCAAGATGACCGTTTCAGTTGTA 59.252 41.667 0.00 0.00 41.37 2.41
3376 3762 1.949847 TAGCAGAGCAGAAGCCGACC 61.950 60.000 0.00 0.00 43.56 4.79
3735 4121 0.751643 GCATTCCTGGCCCGTATTGT 60.752 55.000 0.00 0.00 0.00 2.71
3736 4122 0.751277 TGCATTCCTGGCCCGTATTG 60.751 55.000 0.00 0.00 0.00 1.90
3737 4123 0.033601 TTGCATTCCTGGCCCGTATT 60.034 50.000 0.00 0.00 0.00 1.89
3738 4124 0.185901 ATTGCATTCCTGGCCCGTAT 59.814 50.000 0.00 0.00 0.00 3.06
3739 4125 0.033601 AATTGCATTCCTGGCCCGTA 60.034 50.000 0.00 0.00 0.00 4.02
3740 4126 1.305213 AATTGCATTCCTGGCCCGT 60.305 52.632 0.00 0.00 0.00 5.28
3741 4127 1.142314 CAATTGCATTCCTGGCCCG 59.858 57.895 0.00 0.00 0.00 6.13
3742 4128 0.903942 TTCAATTGCATTCCTGGCCC 59.096 50.000 0.00 0.00 0.00 5.80
3743 4129 2.289569 TGTTTCAATTGCATTCCTGGCC 60.290 45.455 0.00 0.00 0.00 5.36
3744 4130 3.042871 TGTTTCAATTGCATTCCTGGC 57.957 42.857 0.00 0.00 0.00 4.85
3745 4131 4.571919 ACATGTTTCAATTGCATTCCTGG 58.428 39.130 0.00 0.00 0.00 4.45
3746 4132 5.231702 TGACATGTTTCAATTGCATTCCTG 58.768 37.500 0.00 0.00 0.00 3.86
3747 4133 5.471556 TGACATGTTTCAATTGCATTCCT 57.528 34.783 0.00 0.00 0.00 3.36
3748 4134 6.730960 AATGACATGTTTCAATTGCATTCC 57.269 33.333 0.00 0.00 0.00 3.01
3749 4135 7.798801 TGAAATGACATGTTTCAATTGCATTC 58.201 30.769 8.64 1.48 41.23 2.67
3750 4136 7.094975 CCTGAAATGACATGTTTCAATTGCATT 60.095 33.333 11.53 6.21 42.91 3.56
3751 4137 6.370442 CCTGAAATGACATGTTTCAATTGCAT 59.630 34.615 11.53 0.67 42.91 3.96
3752 4138 5.697178 CCTGAAATGACATGTTTCAATTGCA 59.303 36.000 11.53 8.29 42.91 4.08
3753 4139 5.927689 TCCTGAAATGACATGTTTCAATTGC 59.072 36.000 11.53 4.81 42.91 3.56
3754 4140 7.654520 AGTTCCTGAAATGACATGTTTCAATTG 59.345 33.333 11.53 0.00 42.91 2.32
3755 4141 7.654520 CAGTTCCTGAAATGACATGTTTCAATT 59.345 33.333 11.53 1.03 42.91 2.32
3756 4142 7.149973 CAGTTCCTGAAATGACATGTTTCAAT 58.850 34.615 11.53 0.00 42.91 2.57
3757 4143 6.506147 CAGTTCCTGAAATGACATGTTTCAA 58.494 36.000 11.53 0.00 42.91 2.69
3758 4144 5.507817 GCAGTTCCTGAAATGACATGTTTCA 60.508 40.000 11.16 10.28 41.75 2.69
3759 4145 4.919754 GCAGTTCCTGAAATGACATGTTTC 59.080 41.667 11.16 0.24 38.53 2.78
3760 4146 4.341806 TGCAGTTCCTGAAATGACATGTTT 59.658 37.500 11.16 0.00 38.53 2.83
3761 4147 3.890756 TGCAGTTCCTGAAATGACATGTT 59.109 39.130 11.16 0.00 38.53 2.71
3762 4148 3.489355 TGCAGTTCCTGAAATGACATGT 58.511 40.909 11.16 0.00 38.53 3.21
3847 4233 3.347077 AGCTTCTCTCAGATTTGTGGG 57.653 47.619 0.00 0.00 0.00 4.61
4168 4554 0.322975 AGCCAGGTTCTGCACTAGTG 59.677 55.000 18.93 18.93 0.00 2.74
4169 4555 1.059913 AAGCCAGGTTCTGCACTAGT 58.940 50.000 0.00 0.00 0.00 2.57
4170 4556 2.191128 AAAGCCAGGTTCTGCACTAG 57.809 50.000 0.00 0.00 0.00 2.57
4171 4557 2.615493 GCTAAAGCCAGGTTCTGCACTA 60.615 50.000 0.00 0.00 34.31 2.74
4172 4558 1.884067 GCTAAAGCCAGGTTCTGCACT 60.884 52.381 0.00 0.00 34.31 4.40
4173 4559 0.523519 GCTAAAGCCAGGTTCTGCAC 59.476 55.000 0.00 0.00 34.31 4.57
4174 4560 0.955428 CGCTAAAGCCAGGTTCTGCA 60.955 55.000 0.00 0.00 37.91 4.41
4175 4561 1.796796 CGCTAAAGCCAGGTTCTGC 59.203 57.895 0.00 0.00 37.91 4.26
4176 4562 1.796796 GCGCTAAAGCCAGGTTCTG 59.203 57.895 0.00 0.00 37.91 3.02
4177 4563 4.303257 GCGCTAAAGCCAGGTTCT 57.697 55.556 0.00 0.00 37.91 3.01
4194 4580 2.524951 TAAAGGCCCTTACGCACCGG 62.525 60.000 0.00 0.00 0.00 5.28
4195 4581 1.078988 TAAAGGCCCTTACGCACCG 60.079 57.895 0.00 0.00 0.00 4.94
4196 4582 0.035725 ACTAAAGGCCCTTACGCACC 60.036 55.000 0.00 0.00 0.00 5.01
4197 4583 1.084289 CACTAAAGGCCCTTACGCAC 58.916 55.000 0.00 0.00 0.00 5.34
4198 4584 0.688487 ACACTAAAGGCCCTTACGCA 59.312 50.000 0.00 0.00 0.00 5.24
4199 4585 1.366679 GACACTAAAGGCCCTTACGC 58.633 55.000 0.00 0.00 0.00 4.42
4200 4586 1.636988 CGACACTAAAGGCCCTTACG 58.363 55.000 0.00 0.00 0.00 3.18
4201 4587 1.277273 ACCGACACTAAAGGCCCTTAC 59.723 52.381 0.00 0.00 0.00 2.34
4202 4588 1.648116 ACCGACACTAAAGGCCCTTA 58.352 50.000 0.00 0.00 0.00 2.69
4203 4589 0.769247 AACCGACACTAAAGGCCCTT 59.231 50.000 0.00 0.00 0.00 3.95
4204 4590 0.323957 GAACCGACACTAAAGGCCCT 59.676 55.000 0.00 0.00 0.00 5.19
4205 4591 0.675837 GGAACCGACACTAAAGGCCC 60.676 60.000 0.00 0.00 0.00 5.80
4206 4592 0.035739 TGGAACCGACACTAAAGGCC 59.964 55.000 0.00 0.00 0.00 5.19
4207 4593 1.886886 TTGGAACCGACACTAAAGGC 58.113 50.000 0.00 0.00 0.00 4.35
4208 4594 3.004002 GGTTTTGGAACCGACACTAAAGG 59.996 47.826 0.00 0.00 45.43 3.11
4209 4595 4.219143 GGTTTTGGAACCGACACTAAAG 57.781 45.455 0.00 0.00 45.43 1.85
4220 4606 2.619646 TCTTTAGTGCCGGTTTTGGAAC 59.380 45.455 1.90 0.00 37.90 3.62
4221 4607 2.882137 CTCTTTAGTGCCGGTTTTGGAA 59.118 45.455 1.90 0.00 0.00 3.53
4222 4608 2.158726 ACTCTTTAGTGCCGGTTTTGGA 60.159 45.455 1.90 0.00 33.57 3.53
4223 4609 2.031157 CACTCTTTAGTGCCGGTTTTGG 60.031 50.000 1.90 0.00 46.28 3.28
4224 4610 3.268013 CACTCTTTAGTGCCGGTTTTG 57.732 47.619 1.90 0.00 46.28 2.44
4232 4618 8.959287 GACCTTTAGTCCCCACTCTTTAGTGC 62.959 50.000 0.00 0.00 44.38 4.40
4233 4619 5.569026 GACCTTTAGTCCCCACTCTTTAGTG 60.569 48.000 0.00 0.00 44.83 2.74
4234 4620 4.500452 ACCTTTAGTCCCCACTCTTTAGT 58.500 43.478 0.00 0.00 35.91 2.24
4235 4621 5.087391 GACCTTTAGTCCCCACTCTTTAG 57.913 47.826 0.00 0.00 39.84 1.85
4262 4648 1.046204 GATGAACCGGTACTAGGGGG 58.954 60.000 8.00 0.00 0.00 5.40
4263 4649 1.784358 TGATGAACCGGTACTAGGGG 58.216 55.000 8.00 2.88 0.00 4.79
4264 4650 2.963101 TCATGATGAACCGGTACTAGGG 59.037 50.000 8.00 0.00 0.00 3.53
4265 4651 4.665833 TTCATGATGAACCGGTACTAGG 57.334 45.455 8.00 6.41 30.26 3.02
4276 4662 0.176910 TAGCGCCGGTTCATGATGAA 59.823 50.000 2.29 3.29 33.32 2.57
4277 4663 0.176910 TTAGCGCCGGTTCATGATGA 59.823 50.000 2.29 0.00 0.00 2.92
4278 4664 1.003545 CTTTAGCGCCGGTTCATGATG 60.004 52.381 2.29 0.00 0.00 3.07
4279 4665 1.299541 CTTTAGCGCCGGTTCATGAT 58.700 50.000 2.29 0.00 0.00 2.45
4280 4666 1.366111 GCTTTAGCGCCGGTTCATGA 61.366 55.000 2.29 0.00 0.00 3.07
4281 4667 1.062525 GCTTTAGCGCCGGTTCATG 59.937 57.895 2.29 0.00 0.00 3.07
4282 4668 3.497879 GCTTTAGCGCCGGTTCAT 58.502 55.556 2.29 0.00 0.00 2.57
4292 4678 3.047877 ACGTGGTGGCGCTTTAGC 61.048 61.111 7.64 4.67 34.88 3.09
4293 4679 2.860293 CACGTGGTGGCGCTTTAG 59.140 61.111 7.95 0.00 34.88 1.85
4325 4711 4.988598 AAGTCCTGCACGCACCCG 62.989 66.667 0.00 0.00 41.14 5.28
4326 4712 1.298859 CTAAAGTCCTGCACGCACCC 61.299 60.000 0.00 0.00 0.00 4.61
4327 4713 0.602905 ACTAAAGTCCTGCACGCACC 60.603 55.000 0.00 0.00 0.00 5.01
4328 4714 1.725164 GTACTAAAGTCCTGCACGCAC 59.275 52.381 0.00 0.00 0.00 5.34
4329 4715 1.337447 GGTACTAAAGTCCTGCACGCA 60.337 52.381 0.00 0.00 0.00 5.24
4330 4716 1.356938 GGTACTAAAGTCCTGCACGC 58.643 55.000 0.00 0.00 0.00 5.34
4331 4717 1.625616 CGGTACTAAAGTCCTGCACG 58.374 55.000 0.00 0.00 0.00 5.34
4332 4718 1.274447 ACCGGTACTAAAGTCCTGCAC 59.726 52.381 4.49 0.00 0.00 4.57
4333 4719 1.636148 ACCGGTACTAAAGTCCTGCA 58.364 50.000 4.49 0.00 0.00 4.41
4334 4720 2.344025 CAACCGGTACTAAAGTCCTGC 58.656 52.381 8.00 0.00 0.00 4.85
4335 4721 2.301009 ACCAACCGGTACTAAAGTCCTG 59.699 50.000 8.00 0.00 46.71 3.86
4336 4722 2.613129 ACCAACCGGTACTAAAGTCCT 58.387 47.619 8.00 0.00 46.71 3.85
4361 4747 4.581409 CCCCAAATATTTAGTACCGGTTGG 59.419 45.833 15.04 10.33 42.84 3.77
4362 4748 4.581409 CCCCCAAATATTTAGTACCGGTTG 59.419 45.833 15.04 0.00 0.00 3.77
4363 4749 4.795469 CCCCCAAATATTTAGTACCGGTT 58.205 43.478 15.04 0.00 0.00 4.44
4364 4750 4.442401 CCCCCAAATATTTAGTACCGGT 57.558 45.455 13.98 13.98 0.00 5.28
4456 4842 9.787435 ACAGTACTTTCACCTAATGATTTAACA 57.213 29.630 0.00 0.00 37.11 2.41
4468 4854 9.490379 CAAAACTAATCTACAGTACTTTCACCT 57.510 33.333 0.00 0.00 0.00 4.00
4469 4855 9.485206 TCAAAACTAATCTACAGTACTTTCACC 57.515 33.333 0.00 0.00 0.00 4.02
4473 4859 9.490379 CCAGTCAAAACTAATCTACAGTACTTT 57.510 33.333 0.00 0.00 33.25 2.66
4474 4860 8.867097 TCCAGTCAAAACTAATCTACAGTACTT 58.133 33.333 0.00 0.00 33.25 2.24
4475 4861 8.418597 TCCAGTCAAAACTAATCTACAGTACT 57.581 34.615 0.00 0.00 33.25 2.73
4476 4862 9.088512 CATCCAGTCAAAACTAATCTACAGTAC 57.911 37.037 0.00 0.00 33.25 2.73
4477 4863 8.812972 ACATCCAGTCAAAACTAATCTACAGTA 58.187 33.333 0.00 0.00 33.25 2.74
4478 4864 7.680730 ACATCCAGTCAAAACTAATCTACAGT 58.319 34.615 0.00 0.00 33.25 3.55
4479 4865 9.823647 ATACATCCAGTCAAAACTAATCTACAG 57.176 33.333 0.00 0.00 33.25 2.74
4480 4866 9.599866 CATACATCCAGTCAAAACTAATCTACA 57.400 33.333 0.00 0.00 33.25 2.74
4481 4867 9.601217 ACATACATCCAGTCAAAACTAATCTAC 57.399 33.333 0.00 0.00 33.25 2.59
4482 4868 9.599866 CACATACATCCAGTCAAAACTAATCTA 57.400 33.333 0.00 0.00 33.25 1.98
4483 4869 7.554118 CCACATACATCCAGTCAAAACTAATCT 59.446 37.037 0.00 0.00 33.25 2.40
4484 4870 7.552687 TCCACATACATCCAGTCAAAACTAATC 59.447 37.037 0.00 0.00 33.25 1.75
4485 4871 7.402054 TCCACATACATCCAGTCAAAACTAAT 58.598 34.615 0.00 0.00 33.25 1.73
4486 4872 6.774673 TCCACATACATCCAGTCAAAACTAA 58.225 36.000 0.00 0.00 33.25 2.24
4487 4873 6.367374 TCCACATACATCCAGTCAAAACTA 57.633 37.500 0.00 0.00 33.25 2.24
4488 4874 5.241403 TCCACATACATCCAGTCAAAACT 57.759 39.130 0.00 0.00 35.60 2.66
4489 4875 5.066505 GGATCCACATACATCCAGTCAAAAC 59.933 44.000 6.95 0.00 38.84 2.43
4490 4876 5.044919 AGGATCCACATACATCCAGTCAAAA 60.045 40.000 15.82 0.00 41.16 2.44
4491 4877 4.474651 AGGATCCACATACATCCAGTCAAA 59.525 41.667 15.82 0.00 41.16 2.69
4492 4878 4.040047 AGGATCCACATACATCCAGTCAA 58.960 43.478 15.82 0.00 41.16 3.18
4493 4879 3.657610 AGGATCCACATACATCCAGTCA 58.342 45.455 15.82 0.00 41.16 3.41
4494 4880 6.406400 GCTATAGGATCCACATACATCCAGTC 60.406 46.154 15.82 0.00 41.16 3.51
4495 4881 5.423610 GCTATAGGATCCACATACATCCAGT 59.576 44.000 15.82 0.00 41.16 4.00
4496 4882 5.660417 AGCTATAGGATCCACATACATCCAG 59.340 44.000 15.82 1.39 41.16 3.86
4497 4883 5.593786 AGCTATAGGATCCACATACATCCA 58.406 41.667 15.82 0.00 41.16 3.41
4498 4884 6.239176 GCTAGCTATAGGATCCACATACATCC 60.239 46.154 15.82 0.00 39.24 3.51
4499 4885 6.549364 AGCTAGCTATAGGATCCACATACATC 59.451 42.308 17.69 1.96 0.00 3.06
4500 4886 6.439487 AGCTAGCTATAGGATCCACATACAT 58.561 40.000 17.69 3.29 0.00 2.29
4501 4887 5.832221 AGCTAGCTATAGGATCCACATACA 58.168 41.667 17.69 0.00 0.00 2.29
4502 4888 7.883391 TTAGCTAGCTATAGGATCCACATAC 57.117 40.000 24.69 0.00 0.00 2.39
4504 4890 7.986553 AATTAGCTAGCTATAGGATCCACAT 57.013 36.000 24.69 8.65 0.00 3.21
4505 4891 8.895141 TTAATTAGCTAGCTATAGGATCCACA 57.105 34.615 24.69 6.60 0.00 4.17
4506 4892 8.973182 ACTTAATTAGCTAGCTATAGGATCCAC 58.027 37.037 24.69 0.00 0.00 4.02
4507 4893 8.972127 CACTTAATTAGCTAGCTATAGGATCCA 58.028 37.037 24.69 8.07 0.00 3.41
4508 4894 9.191479 TCACTTAATTAGCTAGCTATAGGATCC 57.809 37.037 24.69 2.48 0.00 3.36
4511 4897 9.755122 TGATCACTTAATTAGCTAGCTATAGGA 57.245 33.333 24.69 10.70 0.00 2.94
4529 4915 9.970553 ATGGATATTGCATATACTTGATCACTT 57.029 29.630 0.00 0.00 0.00 3.16
4581 4967 9.836864 TGCCATATCCATATTATACTTGATCAC 57.163 33.333 0.00 0.00 0.00 3.06
4595 4981 9.217336 AGTGATCAACTATATGCCATATCCATA 57.783 33.333 0.00 0.00 37.36 2.74
4596 4982 8.098963 AGTGATCAACTATATGCCATATCCAT 57.901 34.615 0.00 0.00 37.36 3.41
4597 4983 7.500629 AGTGATCAACTATATGCCATATCCA 57.499 36.000 0.00 0.00 37.36 3.41
4598 4984 9.539825 CTAAGTGATCAACTATATGCCATATCC 57.460 37.037 0.00 0.00 38.56 2.59
4599 4985 9.039870 GCTAAGTGATCAACTATATGCCATATC 57.960 37.037 0.00 0.00 38.56 1.63
4600 4986 8.766476 AGCTAAGTGATCAACTATATGCCATAT 58.234 33.333 0.00 2.25 38.56 1.78
4601 4987 8.138928 AGCTAAGTGATCAACTATATGCCATA 57.861 34.615 0.00 0.00 38.56 2.74
4602 4988 7.013823 AGCTAAGTGATCAACTATATGCCAT 57.986 36.000 0.00 0.00 38.56 4.40
4603 4989 6.425210 AGCTAAGTGATCAACTATATGCCA 57.575 37.500 0.00 0.00 38.56 4.92
4604 4990 7.038659 CCTAGCTAAGTGATCAACTATATGCC 58.961 42.308 0.00 0.00 38.56 4.40
4605 4991 7.831753 TCCTAGCTAAGTGATCAACTATATGC 58.168 38.462 0.00 0.00 38.56 3.14
4607 4993 9.196139 GGATCCTAGCTAAGTGATCAACTATAT 57.804 37.037 20.53 0.00 38.56 0.86
4608 4994 8.170730 TGGATCCTAGCTAAGTGATCAACTATA 58.829 37.037 14.23 0.00 38.56 1.31
4609 4995 7.013220 TGGATCCTAGCTAAGTGATCAACTAT 58.987 38.462 14.23 0.00 38.56 2.12
4610 4996 6.373759 TGGATCCTAGCTAAGTGATCAACTA 58.626 40.000 14.23 0.00 38.56 2.24
4611 4997 5.211973 TGGATCCTAGCTAAGTGATCAACT 58.788 41.667 14.23 0.00 42.60 3.16
4612 4998 5.537300 TGGATCCTAGCTAAGTGATCAAC 57.463 43.478 14.23 10.70 35.35 3.18
4613 4999 5.247110 GGATGGATCCTAGCTAAGTGATCAA 59.753 44.000 14.23 14.33 43.73 2.57
4614 5000 4.774726 GGATGGATCCTAGCTAAGTGATCA 59.225 45.833 14.23 0.00 43.73 2.92
4615 5001 5.337578 GGATGGATCCTAGCTAAGTGATC 57.662 47.826 14.23 14.71 43.73 2.92
4623 5009 3.888772 AGCTGGATGGATCCTAGCT 57.111 52.632 20.33 20.33 46.68 3.32
4627 5013 7.691293 CAGATTAGTTTAAGCTGGATGGATCCT 60.691 40.741 14.23 0.00 45.66 3.24
4628 5014 6.429385 CAGATTAGTTTAAGCTGGATGGATCC 59.571 42.308 4.20 4.20 45.66 3.36
4629 5015 7.432350 CAGATTAGTTTAAGCTGGATGGATC 57.568 40.000 1.54 0.00 45.66 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.