Multiple sequence alignment - TraesCS5D01G286300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G286300 chr5D 100.000 4225 0 0 1 4225 386655353 386651129 0.000000e+00 7803.0
1 TraesCS5D01G286300 chr5D 88.961 154 14 3 11 161 386655850 386656003 2.010000e-43 187.0
2 TraesCS5D01G286300 chr5D 91.429 105 9 0 3365 3469 210057887 210057991 1.220000e-30 145.0
3 TraesCS5D01G286300 chr5A 91.455 2797 137 40 614 3355 488264949 488262200 0.000000e+00 3747.0
4 TraesCS5D01G286300 chr5A 85.565 672 55 21 3462 4096 488262198 488261532 0.000000e+00 665.0
5 TraesCS5D01G286300 chr5A 89.744 78 7 1 545 621 488273589 488273512 9.670000e-17 99.0
6 TraesCS5D01G286300 chr5A 91.667 60 3 2 382 441 591974858 591974801 9.740000e-12 82.4
7 TraesCS5D01G286300 chr5B 90.783 2235 113 48 495 2688 464330192 464328010 0.000000e+00 2900.0
8 TraesCS5D01G286300 chr5B 93.820 712 31 4 2672 3374 464327996 464327289 0.000000e+00 1059.0
9 TraesCS5D01G286300 chr5B 87.410 691 50 11 3462 4128 464327291 464326614 0.000000e+00 760.0
10 TraesCS5D01G286300 chr3D 92.254 142 7 4 23 161 590127631 590127491 9.270000e-47 198.0
11 TraesCS5D01G286300 chr3D 87.730 163 18 2 1 161 28383163 28383001 5.580000e-44 189.0
12 TraesCS5D01G286300 chr3D 90.141 142 12 2 22 161 522550908 522550767 2.590000e-42 183.0
13 TraesCS5D01G286300 chr7A 88.415 164 17 2 1 162 240742865 240742702 3.330000e-46 196.0
14 TraesCS5D01G286300 chr7D 90.845 142 11 2 22 161 4613638 4613497 5.580000e-44 189.0
15 TraesCS5D01G286300 chr2A 87.730 163 18 2 1 161 584344570 584344408 5.580000e-44 189.0
16 TraesCS5D01G286300 chr1D 89.189 148 13 3 24 169 459410076 459410222 9.330000e-42 182.0
17 TraesCS5D01G286300 chr4D 87.582 153 16 3 11 160 304220393 304220545 1.560000e-39 174.0
18 TraesCS5D01G286300 chr2B 97.895 95 2 0 3363 3457 583771839 583771745 9.400000e-37 165.0
19 TraesCS5D01G286300 chr2B 92.233 103 7 1 3363 3464 799071224 799071326 1.220000e-30 145.0
20 TraesCS5D01G286300 chr6A 94.845 97 4 1 3368 3463 593927261 593927357 2.630000e-32 150.0
21 TraesCS5D01G286300 chr6A 93.137 102 4 3 3357 3457 7099602 7099701 3.400000e-31 147.0
22 TraesCS5D01G286300 chr3B 97.701 87 2 0 3371 3457 5596333 5596419 2.630000e-32 150.0
23 TraesCS5D01G286300 chr3B 95.699 93 4 0 3371 3463 5735100 5735008 2.630000e-32 150.0
24 TraesCS5D01G286300 chr3B 94.792 96 3 2 3364 3457 101314944 101315039 9.460000e-32 148.0
25 TraesCS5D01G286300 chr3A 86.992 123 15 1 3364 3486 391475381 391475502 2.050000e-28 137.0
26 TraesCS5D01G286300 chr3A 92.982 57 3 1 382 437 466754525 466754469 9.740000e-12 82.4
27 TraesCS5D01G286300 chr1B 93.443 61 2 2 386 446 667815913 667815855 5.820000e-14 89.8
28 TraesCS5D01G286300 chr4B 94.444 54 3 0 380 433 638131634 638131687 2.710000e-12 84.2
29 TraesCS5D01G286300 chr7B 91.525 59 4 1 378 435 61062966 61062908 3.500000e-11 80.5
30 TraesCS5D01G286300 chr6D 92.727 55 4 0 387 441 37451558 37451504 3.500000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G286300 chr5D 386651129 386655353 4224 True 7803 7803 100.000 1 4225 1 chr5D.!!$R1 4224
1 TraesCS5D01G286300 chr5A 488261532 488264949 3417 True 2206 3747 88.510 614 4096 2 chr5A.!!$R3 3482
2 TraesCS5D01G286300 chr5B 464326614 464330192 3578 True 1573 2900 90.671 495 4128 3 chr5B.!!$R1 3633

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
256 257 0.036952 CAGGTTCATCTGACTGCCGT 60.037 55.0 0.00 0.0 36.93 5.68 F
263 264 0.036952 ATCTGACTGCCGTTGTCCTG 60.037 55.0 0.00 0.0 33.83 3.86 F
1240 1305 0.109504 GCTTCTTCGAGACGCTCTGT 60.110 55.0 5.53 0.0 36.66 3.41 F
2805 2926 0.251474 AGCAAAGCCAGGAGAATGCA 60.251 50.0 8.96 0.0 36.30 3.96 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2206 2292 0.384230 CGTGACCAATTGTGTGTCGC 60.384 55.000 13.65 13.65 34.63 5.19 R
2244 2330 3.004944 GGATTAGAGAATTCGCCGAGAGT 59.995 47.826 5.49 0.00 0.00 3.24 R
2904 3025 1.000506 TGACCTGCGTAAGTCAGAACC 59.999 52.381 0.35 0.00 41.81 3.62 R
4202 4387 0.036388 AACGGTGTGCATCTTCCGAT 60.036 50.000 21.71 11.78 44.86 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 0.666374 GTCAAAACCGGTCAACTGGG 59.334 55.000 8.04 1.63 46.75 4.45
42 43 0.547075 TCAAAACCGGTCAACTGGGA 59.453 50.000 8.04 0.00 46.75 4.37
43 44 0.951558 CAAAACCGGTCAACTGGGAG 59.048 55.000 8.04 0.00 46.75 4.30
44 45 0.841289 AAAACCGGTCAACTGGGAGA 59.159 50.000 8.04 0.00 46.75 3.71
45 46 0.396811 AAACCGGTCAACTGGGAGAG 59.603 55.000 8.04 0.00 46.75 3.20
46 47 0.471211 AACCGGTCAACTGGGAGAGA 60.471 55.000 8.04 0.00 46.75 3.10
47 48 0.471211 ACCGGTCAACTGGGAGAGAA 60.471 55.000 0.00 0.00 46.75 2.87
48 49 0.685097 CCGGTCAACTGGGAGAGAAA 59.315 55.000 0.00 0.00 38.76 2.52
49 50 1.279271 CCGGTCAACTGGGAGAGAAAT 59.721 52.381 0.00 0.00 38.76 2.17
50 51 2.350522 CGGTCAACTGGGAGAGAAATG 58.649 52.381 0.00 0.00 0.00 2.32
51 52 2.289694 CGGTCAACTGGGAGAGAAATGT 60.290 50.000 0.00 0.00 0.00 2.71
52 53 3.756117 GGTCAACTGGGAGAGAAATGTT 58.244 45.455 0.00 0.00 0.00 2.71
53 54 3.503748 GGTCAACTGGGAGAGAAATGTTG 59.496 47.826 0.00 0.00 36.93 3.33
54 55 4.389374 GTCAACTGGGAGAGAAATGTTGA 58.611 43.478 0.00 0.00 40.58 3.18
55 56 4.821805 GTCAACTGGGAGAGAAATGTTGAA 59.178 41.667 7.74 0.00 43.11 2.69
56 57 5.474876 GTCAACTGGGAGAGAAATGTTGAAT 59.525 40.000 7.74 0.00 43.11 2.57
57 58 5.707298 TCAACTGGGAGAGAAATGTTGAATC 59.293 40.000 0.00 0.00 40.13 2.52
58 59 4.593956 ACTGGGAGAGAAATGTTGAATCC 58.406 43.478 0.00 0.00 0.00 3.01
59 60 4.290722 ACTGGGAGAGAAATGTTGAATCCT 59.709 41.667 0.00 0.00 0.00 3.24
60 61 4.592942 TGGGAGAGAAATGTTGAATCCTG 58.407 43.478 0.00 0.00 0.00 3.86
61 62 3.950395 GGGAGAGAAATGTTGAATCCTGG 59.050 47.826 0.00 0.00 0.00 4.45
62 63 3.379688 GGAGAGAAATGTTGAATCCTGGC 59.620 47.826 0.00 0.00 0.00 4.85
63 64 3.359950 AGAGAAATGTTGAATCCTGGCC 58.640 45.455 0.00 0.00 0.00 5.36
64 65 3.091545 GAGAAATGTTGAATCCTGGCCA 58.908 45.455 4.71 4.71 0.00 5.36
65 66 3.094572 AGAAATGTTGAATCCTGGCCAG 58.905 45.455 26.87 26.87 0.00 4.85
66 67 2.610438 AATGTTGAATCCTGGCCAGT 57.390 45.000 30.63 13.43 0.00 4.00
67 68 2.610438 ATGTTGAATCCTGGCCAGTT 57.390 45.000 30.63 19.69 0.00 3.16
68 69 2.380064 TGTTGAATCCTGGCCAGTTT 57.620 45.000 30.63 22.78 0.00 2.66
69 70 2.676748 TGTTGAATCCTGGCCAGTTTT 58.323 42.857 30.63 22.42 0.00 2.43
70 71 2.364970 TGTTGAATCCTGGCCAGTTTTG 59.635 45.455 30.63 15.82 0.00 2.44
71 72 2.627699 GTTGAATCCTGGCCAGTTTTGA 59.372 45.455 30.63 20.62 0.00 2.69
72 73 2.517959 TGAATCCTGGCCAGTTTTGAG 58.482 47.619 30.63 14.69 0.00 3.02
73 74 2.108075 TGAATCCTGGCCAGTTTTGAGA 59.892 45.455 30.63 19.52 0.00 3.27
74 75 2.503895 ATCCTGGCCAGTTTTGAGAG 57.496 50.000 30.63 13.19 0.00 3.20
75 76 1.140312 TCCTGGCCAGTTTTGAGAGT 58.860 50.000 30.63 0.00 0.00 3.24
76 77 1.494721 TCCTGGCCAGTTTTGAGAGTT 59.505 47.619 30.63 0.00 0.00 3.01
77 78 1.610522 CCTGGCCAGTTTTGAGAGTTG 59.389 52.381 30.63 7.41 0.00 3.16
78 79 1.610522 CTGGCCAGTTTTGAGAGTTGG 59.389 52.381 25.53 0.00 0.00 3.77
79 80 0.961753 GGCCAGTTTTGAGAGTTGGG 59.038 55.000 0.00 0.00 0.00 4.12
80 81 0.961753 GCCAGTTTTGAGAGTTGGGG 59.038 55.000 0.00 0.00 0.00 4.96
81 82 1.754201 GCCAGTTTTGAGAGTTGGGGT 60.754 52.381 0.00 0.00 0.00 4.95
82 83 2.666317 CCAGTTTTGAGAGTTGGGGTT 58.334 47.619 0.00 0.00 0.00 4.11
83 84 2.362077 CCAGTTTTGAGAGTTGGGGTTG 59.638 50.000 0.00 0.00 0.00 3.77
84 85 3.023832 CAGTTTTGAGAGTTGGGGTTGT 58.976 45.455 0.00 0.00 0.00 3.32
85 86 4.204012 CAGTTTTGAGAGTTGGGGTTGTA 58.796 43.478 0.00 0.00 0.00 2.41
86 87 4.642885 CAGTTTTGAGAGTTGGGGTTGTAA 59.357 41.667 0.00 0.00 0.00 2.41
87 88 5.301805 CAGTTTTGAGAGTTGGGGTTGTAAT 59.698 40.000 0.00 0.00 0.00 1.89
88 89 5.897250 AGTTTTGAGAGTTGGGGTTGTAATT 59.103 36.000 0.00 0.00 0.00 1.40
89 90 6.382859 AGTTTTGAGAGTTGGGGTTGTAATTT 59.617 34.615 0.00 0.00 0.00 1.82
90 91 7.562088 AGTTTTGAGAGTTGGGGTTGTAATTTA 59.438 33.333 0.00 0.00 0.00 1.40
91 92 7.519032 TTTGAGAGTTGGGGTTGTAATTTAG 57.481 36.000 0.00 0.00 0.00 1.85
92 93 6.442541 TGAGAGTTGGGGTTGTAATTTAGA 57.557 37.500 0.00 0.00 0.00 2.10
93 94 6.235664 TGAGAGTTGGGGTTGTAATTTAGAC 58.764 40.000 0.00 0.00 0.00 2.59
94 95 5.243207 AGAGTTGGGGTTGTAATTTAGACG 58.757 41.667 0.00 0.00 0.00 4.18
95 96 4.329392 AGTTGGGGTTGTAATTTAGACGG 58.671 43.478 0.00 0.00 0.00 4.79
96 97 4.074259 GTTGGGGTTGTAATTTAGACGGT 58.926 43.478 0.00 0.00 0.00 4.83
97 98 5.012975 AGTTGGGGTTGTAATTTAGACGGTA 59.987 40.000 0.00 0.00 0.00 4.02
98 99 5.697082 TGGGGTTGTAATTTAGACGGTAT 57.303 39.130 0.00 0.00 0.00 2.73
99 100 6.064735 TGGGGTTGTAATTTAGACGGTATT 57.935 37.500 0.00 0.00 0.00 1.89
100 101 5.881443 TGGGGTTGTAATTTAGACGGTATTG 59.119 40.000 0.00 0.00 0.00 1.90
101 102 5.297527 GGGGTTGTAATTTAGACGGTATTGG 59.702 44.000 0.00 0.00 0.00 3.16
102 103 6.114767 GGGTTGTAATTTAGACGGTATTGGA 58.885 40.000 0.00 0.00 0.00 3.53
103 104 6.259387 GGGTTGTAATTTAGACGGTATTGGAG 59.741 42.308 0.00 0.00 0.00 3.86
104 105 6.820152 GGTTGTAATTTAGACGGTATTGGAGT 59.180 38.462 0.00 0.00 0.00 3.85
105 106 7.335171 GGTTGTAATTTAGACGGTATTGGAGTT 59.665 37.037 0.00 0.00 0.00 3.01
106 107 8.385858 GTTGTAATTTAGACGGTATTGGAGTTC 58.614 37.037 0.00 0.00 0.00 3.01
107 108 6.753279 TGTAATTTAGACGGTATTGGAGTTCG 59.247 38.462 0.00 0.00 0.00 3.95
108 109 3.788333 TTAGACGGTATTGGAGTTCGG 57.212 47.619 0.00 0.00 0.00 4.30
109 110 0.822164 AGACGGTATTGGAGTTCGGG 59.178 55.000 0.00 0.00 0.00 5.14
110 111 0.533951 GACGGTATTGGAGTTCGGGT 59.466 55.000 0.00 0.00 0.00 5.28
111 112 0.978907 ACGGTATTGGAGTTCGGGTT 59.021 50.000 0.00 0.00 0.00 4.11
112 113 1.338389 ACGGTATTGGAGTTCGGGTTG 60.338 52.381 0.00 0.00 0.00 3.77
113 114 1.338389 CGGTATTGGAGTTCGGGTTGT 60.338 52.381 0.00 0.00 0.00 3.32
114 115 2.094078 CGGTATTGGAGTTCGGGTTGTA 60.094 50.000 0.00 0.00 0.00 2.41
115 116 3.617045 CGGTATTGGAGTTCGGGTTGTAA 60.617 47.826 0.00 0.00 0.00 2.41
116 117 4.325972 GGTATTGGAGTTCGGGTTGTAAA 58.674 43.478 0.00 0.00 0.00 2.01
117 118 4.945543 GGTATTGGAGTTCGGGTTGTAAAT 59.054 41.667 0.00 0.00 0.00 1.40
118 119 5.416639 GGTATTGGAGTTCGGGTTGTAAATT 59.583 40.000 0.00 0.00 0.00 1.82
119 120 6.598850 GGTATTGGAGTTCGGGTTGTAAATTA 59.401 38.462 0.00 0.00 0.00 1.40
120 121 6.753107 ATTGGAGTTCGGGTTGTAAATTAG 57.247 37.500 0.00 0.00 0.00 1.73
121 122 5.486735 TGGAGTTCGGGTTGTAAATTAGA 57.513 39.130 0.00 0.00 0.00 2.10
122 123 5.240121 TGGAGTTCGGGTTGTAAATTAGAC 58.760 41.667 0.00 0.00 0.00 2.59
123 124 5.012354 TGGAGTTCGGGTTGTAAATTAGACT 59.988 40.000 0.00 0.00 0.00 3.24
124 125 6.211184 TGGAGTTCGGGTTGTAAATTAGACTA 59.789 38.462 0.00 0.00 0.00 2.59
125 126 6.755607 GGAGTTCGGGTTGTAAATTAGACTAG 59.244 42.308 0.00 0.00 0.00 2.57
126 127 6.637657 AGTTCGGGTTGTAAATTAGACTAGG 58.362 40.000 0.00 0.00 0.00 3.02
127 128 5.603170 TCGGGTTGTAAATTAGACTAGGG 57.397 43.478 0.00 0.00 0.00 3.53
128 129 4.124970 CGGGTTGTAAATTAGACTAGGGC 58.875 47.826 0.00 0.00 0.00 5.19
129 130 4.383335 CGGGTTGTAAATTAGACTAGGGCA 60.383 45.833 0.00 0.00 0.00 5.36
130 131 5.503002 GGGTTGTAAATTAGACTAGGGCAA 58.497 41.667 0.00 0.00 0.00 4.52
131 132 5.947566 GGGTTGTAAATTAGACTAGGGCAAA 59.052 40.000 0.00 0.00 0.00 3.68
132 133 6.605995 GGGTTGTAAATTAGACTAGGGCAAAT 59.394 38.462 0.00 0.00 0.00 2.32
133 134 7.416326 GGGTTGTAAATTAGACTAGGGCAAATG 60.416 40.741 0.00 0.00 0.00 2.32
134 135 7.122204 GGTTGTAAATTAGACTAGGGCAAATGT 59.878 37.037 0.00 0.00 0.00 2.71
135 136 7.859325 TGTAAATTAGACTAGGGCAAATGTC 57.141 36.000 0.00 0.00 0.00 3.06
136 137 7.630082 TGTAAATTAGACTAGGGCAAATGTCT 58.370 34.615 0.00 0.00 41.81 3.41
137 138 7.552687 TGTAAATTAGACTAGGGCAAATGTCTG 59.447 37.037 10.52 0.00 39.69 3.51
138 139 4.487714 TTAGACTAGGGCAAATGTCTGG 57.512 45.455 10.52 0.00 39.69 3.86
139 140 1.561542 AGACTAGGGCAAATGTCTGGG 59.438 52.381 0.00 0.00 38.22 4.45
140 141 0.625849 ACTAGGGCAAATGTCTGGGG 59.374 55.000 0.00 0.00 0.00 4.96
141 142 0.625849 CTAGGGCAAATGTCTGGGGT 59.374 55.000 0.00 0.00 0.00 4.95
142 143 1.005924 CTAGGGCAAATGTCTGGGGTT 59.994 52.381 0.00 0.00 0.00 4.11
143 144 0.542702 AGGGCAAATGTCTGGGGTTG 60.543 55.000 0.00 0.00 0.00 3.77
144 145 0.541764 GGGCAAATGTCTGGGGTTGA 60.542 55.000 0.00 0.00 0.00 3.18
145 146 1.337118 GGCAAATGTCTGGGGTTGAA 58.663 50.000 0.00 0.00 0.00 2.69
146 147 1.691434 GGCAAATGTCTGGGGTTGAAA 59.309 47.619 0.00 0.00 0.00 2.69
147 148 2.302733 GGCAAATGTCTGGGGTTGAAAT 59.697 45.455 0.00 0.00 0.00 2.17
148 149 3.513515 GGCAAATGTCTGGGGTTGAAATA 59.486 43.478 0.00 0.00 0.00 1.40
149 150 4.162131 GGCAAATGTCTGGGGTTGAAATAT 59.838 41.667 0.00 0.00 0.00 1.28
150 151 5.111293 GCAAATGTCTGGGGTTGAAATATG 58.889 41.667 0.00 0.00 0.00 1.78
151 152 5.111293 CAAATGTCTGGGGTTGAAATATGC 58.889 41.667 0.00 0.00 0.00 3.14
152 153 3.448093 TGTCTGGGGTTGAAATATGCA 57.552 42.857 0.00 0.00 0.00 3.96
153 154 3.088532 TGTCTGGGGTTGAAATATGCAC 58.911 45.455 0.00 0.00 0.00 4.57
154 155 3.245229 TGTCTGGGGTTGAAATATGCACT 60.245 43.478 0.00 0.00 0.00 4.40
155 156 3.763897 GTCTGGGGTTGAAATATGCACTT 59.236 43.478 0.00 0.00 0.00 3.16
156 157 4.016444 TCTGGGGTTGAAATATGCACTTC 58.984 43.478 0.00 0.00 0.00 3.01
157 158 4.019174 CTGGGGTTGAAATATGCACTTCT 58.981 43.478 0.00 0.00 0.00 2.85
158 159 4.016444 TGGGGTTGAAATATGCACTTCTC 58.984 43.478 0.00 0.00 0.00 2.87
159 160 4.263905 TGGGGTTGAAATATGCACTTCTCT 60.264 41.667 0.00 0.00 0.00 3.10
160 161 4.336713 GGGGTTGAAATATGCACTTCTCTC 59.663 45.833 0.00 0.00 0.00 3.20
161 162 4.034510 GGGTTGAAATATGCACTTCTCTCG 59.965 45.833 0.00 0.00 0.00 4.04
162 163 4.494855 GGTTGAAATATGCACTTCTCTCGC 60.495 45.833 0.00 0.00 0.00 5.03
163 164 4.128925 TGAAATATGCACTTCTCTCGCT 57.871 40.909 0.00 0.00 0.00 4.93
164 165 4.507710 TGAAATATGCACTTCTCTCGCTT 58.492 39.130 0.00 0.00 0.00 4.68
165 166 4.937620 TGAAATATGCACTTCTCTCGCTTT 59.062 37.500 0.00 0.00 0.00 3.51
166 167 6.106003 TGAAATATGCACTTCTCTCGCTTTA 58.894 36.000 0.00 0.00 0.00 1.85
167 168 6.763135 TGAAATATGCACTTCTCTCGCTTTAT 59.237 34.615 0.00 0.00 0.00 1.40
168 169 7.926018 TGAAATATGCACTTCTCTCGCTTTATA 59.074 33.333 0.00 0.00 0.00 0.98
169 170 8.662781 AAATATGCACTTCTCTCGCTTTATAA 57.337 30.769 0.00 0.00 0.00 0.98
170 171 8.839310 AATATGCACTTCTCTCGCTTTATAAT 57.161 30.769 0.00 0.00 0.00 1.28
171 172 5.973651 TGCACTTCTCTCGCTTTATAATG 57.026 39.130 0.00 0.00 0.00 1.90
172 173 5.660460 TGCACTTCTCTCGCTTTATAATGA 58.340 37.500 2.66 0.00 0.00 2.57
173 174 6.283694 TGCACTTCTCTCGCTTTATAATGAT 58.716 36.000 2.66 0.00 0.00 2.45
174 175 6.201615 TGCACTTCTCTCGCTTTATAATGATG 59.798 38.462 2.66 0.00 0.00 3.07
175 176 6.347240 GCACTTCTCTCGCTTTATAATGATGG 60.347 42.308 2.66 0.00 0.00 3.51
176 177 5.698545 ACTTCTCTCGCTTTATAATGATGGC 59.301 40.000 2.66 0.00 0.00 4.40
177 178 5.213891 TCTCTCGCTTTATAATGATGGCA 57.786 39.130 2.66 0.00 0.00 4.92
178 179 5.233225 TCTCTCGCTTTATAATGATGGCAG 58.767 41.667 2.66 0.00 0.00 4.85
179 180 4.318332 TCTCGCTTTATAATGATGGCAGG 58.682 43.478 2.66 0.00 0.00 4.85
180 181 4.040339 TCTCGCTTTATAATGATGGCAGGA 59.960 41.667 2.66 0.00 0.00 3.86
181 182 4.065088 TCGCTTTATAATGATGGCAGGAC 58.935 43.478 2.66 0.00 0.00 3.85
182 183 3.120546 CGCTTTATAATGATGGCAGGACG 60.121 47.826 2.66 0.00 0.00 4.79
183 184 4.065088 GCTTTATAATGATGGCAGGACGA 58.935 43.478 2.66 0.00 0.00 4.20
184 185 4.083802 GCTTTATAATGATGGCAGGACGAC 60.084 45.833 2.66 0.00 0.00 4.34
185 186 2.154854 ATAATGATGGCAGGACGACG 57.845 50.000 0.00 0.00 0.00 5.12
186 187 0.821517 TAATGATGGCAGGACGACGT 59.178 50.000 0.00 0.00 0.00 4.34
187 188 0.821517 AATGATGGCAGGACGACGTA 59.178 50.000 0.00 0.00 0.00 3.57
188 189 0.385751 ATGATGGCAGGACGACGTAG 59.614 55.000 0.00 0.00 0.00 3.51
189 190 1.589196 GATGGCAGGACGACGTAGC 60.589 63.158 0.00 5.71 0.00 3.58
190 191 2.279502 GATGGCAGGACGACGTAGCA 62.280 60.000 17.60 7.59 0.00 3.49
191 192 1.884075 ATGGCAGGACGACGTAGCAA 61.884 55.000 17.60 9.69 0.00 3.91
192 193 1.805945 GGCAGGACGACGTAGCAAG 60.806 63.158 17.60 2.46 0.00 4.01
193 194 1.211969 GCAGGACGACGTAGCAAGA 59.788 57.895 0.00 0.00 0.00 3.02
194 195 0.388134 GCAGGACGACGTAGCAAGAA 60.388 55.000 0.00 0.00 0.00 2.52
195 196 1.933500 GCAGGACGACGTAGCAAGAAA 60.934 52.381 0.00 0.00 0.00 2.52
196 197 2.400399 CAGGACGACGTAGCAAGAAAA 58.600 47.619 0.00 0.00 0.00 2.29
197 198 2.993899 CAGGACGACGTAGCAAGAAAAT 59.006 45.455 0.00 0.00 0.00 1.82
198 199 2.993899 AGGACGACGTAGCAAGAAAATG 59.006 45.455 0.00 0.00 0.00 2.32
199 200 2.991190 GGACGACGTAGCAAGAAAATGA 59.009 45.455 0.00 0.00 0.00 2.57
200 201 3.430895 GGACGACGTAGCAAGAAAATGAA 59.569 43.478 0.00 0.00 0.00 2.57
201 202 4.092968 GGACGACGTAGCAAGAAAATGAAT 59.907 41.667 0.00 0.00 0.00 2.57
202 203 5.290158 GGACGACGTAGCAAGAAAATGAATA 59.710 40.000 0.00 0.00 0.00 1.75
203 204 6.183360 GGACGACGTAGCAAGAAAATGAATAA 60.183 38.462 0.00 0.00 0.00 1.40
204 205 6.531439 ACGACGTAGCAAGAAAATGAATAAC 58.469 36.000 0.00 0.00 0.00 1.89
205 206 6.367969 ACGACGTAGCAAGAAAATGAATAACT 59.632 34.615 0.00 0.00 0.00 2.24
206 207 7.095355 ACGACGTAGCAAGAAAATGAATAACTT 60.095 33.333 0.00 0.00 0.00 2.66
207 208 7.214449 CGACGTAGCAAGAAAATGAATAACTTG 59.786 37.037 0.00 0.00 40.24 3.16
208 209 7.871853 ACGTAGCAAGAAAATGAATAACTTGT 58.128 30.769 0.00 0.00 39.69 3.16
209 210 8.015658 ACGTAGCAAGAAAATGAATAACTTGTC 58.984 33.333 0.00 0.00 39.69 3.18
210 211 8.015087 CGTAGCAAGAAAATGAATAACTTGTCA 58.985 33.333 0.00 0.00 39.69 3.58
211 212 9.846248 GTAGCAAGAAAATGAATAACTTGTCAT 57.154 29.630 0.00 0.00 39.69 3.06
221 222 9.621629 AATGAATAACTTGTCATTATAACGGGA 57.378 29.630 0.00 0.00 41.54 5.14
222 223 9.793259 ATGAATAACTTGTCATTATAACGGGAT 57.207 29.630 0.00 0.00 30.12 3.85
223 224 9.621629 TGAATAACTTGTCATTATAACGGGATT 57.378 29.630 0.00 0.00 0.00 3.01
226 227 7.931578 AACTTGTCATTATAACGGGATTTGA 57.068 32.000 0.00 0.00 0.00 2.69
227 228 7.316544 ACTTGTCATTATAACGGGATTTGAC 57.683 36.000 6.28 6.28 34.16 3.18
228 229 7.110155 ACTTGTCATTATAACGGGATTTGACT 58.890 34.615 12.11 0.00 34.55 3.41
229 230 8.262227 ACTTGTCATTATAACGGGATTTGACTA 58.738 33.333 12.11 6.11 34.55 2.59
230 231 9.104965 CTTGTCATTATAACGGGATTTGACTAA 57.895 33.333 12.11 6.39 34.55 2.24
231 232 9.621629 TTGTCATTATAACGGGATTTGACTAAT 57.378 29.630 12.11 0.00 34.55 1.73
232 233 9.621629 TGTCATTATAACGGGATTTGACTAATT 57.378 29.630 12.11 0.00 34.55 1.40
237 238 5.638596 AACGGGATTTGACTAATTTCACC 57.361 39.130 0.00 0.00 0.00 4.02
238 239 4.658063 ACGGGATTTGACTAATTTCACCA 58.342 39.130 0.00 0.00 0.00 4.17
239 240 4.700213 ACGGGATTTGACTAATTTCACCAG 59.300 41.667 0.00 0.00 0.00 4.00
240 241 4.096382 CGGGATTTGACTAATTTCACCAGG 59.904 45.833 0.00 0.00 0.00 4.45
241 242 5.016831 GGGATTTGACTAATTTCACCAGGT 58.983 41.667 0.00 0.00 0.00 4.00
242 243 5.480422 GGGATTTGACTAATTTCACCAGGTT 59.520 40.000 0.00 0.00 0.00 3.50
243 244 6.350194 GGGATTTGACTAATTTCACCAGGTTC 60.350 42.308 0.00 0.00 0.00 3.62
244 245 6.208599 GGATTTGACTAATTTCACCAGGTTCA 59.791 38.462 0.00 0.00 0.00 3.18
245 246 7.093771 GGATTTGACTAATTTCACCAGGTTCAT 60.094 37.037 0.00 0.00 0.00 2.57
246 247 6.817765 TTGACTAATTTCACCAGGTTCATC 57.182 37.500 0.00 0.00 0.00 2.92
247 248 6.126863 TGACTAATTTCACCAGGTTCATCT 57.873 37.500 0.00 0.00 0.00 2.90
248 249 5.939883 TGACTAATTTCACCAGGTTCATCTG 59.060 40.000 0.00 0.00 34.70 2.90
249 250 6.126863 ACTAATTTCACCAGGTTCATCTGA 57.873 37.500 0.00 0.00 36.93 3.27
250 251 5.940470 ACTAATTTCACCAGGTTCATCTGAC 59.060 40.000 0.00 0.00 36.93 3.51
251 252 4.647564 ATTTCACCAGGTTCATCTGACT 57.352 40.909 0.00 0.00 36.93 3.41
252 253 3.407424 TTCACCAGGTTCATCTGACTG 57.593 47.619 0.00 0.00 36.93 3.51
253 254 1.002430 TCACCAGGTTCATCTGACTGC 59.998 52.381 0.00 0.00 36.93 4.40
254 255 0.326264 ACCAGGTTCATCTGACTGCC 59.674 55.000 0.00 0.00 36.93 4.85
255 256 0.742281 CCAGGTTCATCTGACTGCCG 60.742 60.000 0.00 0.00 36.93 5.69
256 257 0.036952 CAGGTTCATCTGACTGCCGT 60.037 55.000 0.00 0.00 36.93 5.68
257 258 0.687354 AGGTTCATCTGACTGCCGTT 59.313 50.000 0.00 0.00 0.00 4.44
258 259 0.798776 GGTTCATCTGACTGCCGTTG 59.201 55.000 0.00 0.00 0.00 4.10
259 260 1.512926 GTTCATCTGACTGCCGTTGT 58.487 50.000 0.00 0.00 0.00 3.32
260 261 1.461127 GTTCATCTGACTGCCGTTGTC 59.539 52.381 0.00 0.00 35.21 3.18
261 262 0.037326 TCATCTGACTGCCGTTGTCC 60.037 55.000 0.00 0.00 33.83 4.02
262 263 0.036952 CATCTGACTGCCGTTGTCCT 60.037 55.000 0.00 0.00 33.83 3.85
263 264 0.036952 ATCTGACTGCCGTTGTCCTG 60.037 55.000 0.00 0.00 33.83 3.86
264 265 2.280797 TGACTGCCGTTGTCCTGC 60.281 61.111 0.00 0.00 33.83 4.85
265 266 2.280797 GACTGCCGTTGTCCTGCA 60.281 61.111 0.00 0.00 0.00 4.41
267 268 2.281070 CTGCCGTTGTCCTGCAGT 60.281 61.111 13.81 0.00 45.69 4.40
268 269 2.280797 TGCCGTTGTCCTGCAGTC 60.281 61.111 13.81 6.09 0.00 3.51
269 270 3.414700 GCCGTTGTCCTGCAGTCG 61.415 66.667 13.81 8.90 0.00 4.18
270 271 2.738521 CCGTTGTCCTGCAGTCGG 60.739 66.667 13.81 13.76 38.92 4.79
271 272 2.029073 CGTTGTCCTGCAGTCGGT 59.971 61.111 13.81 0.00 0.00 4.69
272 273 2.022129 CGTTGTCCTGCAGTCGGTC 61.022 63.158 13.81 0.00 0.00 4.79
273 274 2.022129 GTTGTCCTGCAGTCGGTCG 61.022 63.158 13.81 0.00 0.00 4.79
274 275 3.220999 TTGTCCTGCAGTCGGTCGG 62.221 63.158 13.81 0.00 0.00 4.79
275 276 3.371063 GTCCTGCAGTCGGTCGGA 61.371 66.667 13.81 0.00 0.00 4.55
276 277 2.362503 TCCTGCAGTCGGTCGGAT 60.363 61.111 13.81 0.00 0.00 4.18
277 278 2.202797 CCTGCAGTCGGTCGGATG 60.203 66.667 13.81 0.00 0.00 3.51
278 279 2.573869 CTGCAGTCGGTCGGATGT 59.426 61.111 5.25 0.00 0.00 3.06
279 280 1.807165 CTGCAGTCGGTCGGATGTG 60.807 63.158 5.25 0.00 0.00 3.21
280 281 2.261671 GCAGTCGGTCGGATGTGT 59.738 61.111 0.00 0.00 0.00 3.72
281 282 1.374252 GCAGTCGGTCGGATGTGTT 60.374 57.895 0.00 0.00 0.00 3.32
282 283 0.949105 GCAGTCGGTCGGATGTGTTT 60.949 55.000 0.00 0.00 0.00 2.83
283 284 1.508632 CAGTCGGTCGGATGTGTTTT 58.491 50.000 0.00 0.00 0.00 2.43
284 285 1.194547 CAGTCGGTCGGATGTGTTTTG 59.805 52.381 0.00 0.00 0.00 2.44
285 286 1.069513 AGTCGGTCGGATGTGTTTTGA 59.930 47.619 0.00 0.00 0.00 2.69
286 287 1.868498 GTCGGTCGGATGTGTTTTGAA 59.132 47.619 0.00 0.00 0.00 2.69
287 288 1.868498 TCGGTCGGATGTGTTTTGAAC 59.132 47.619 0.00 0.00 0.00 3.18
288 289 1.600013 CGGTCGGATGTGTTTTGAACA 59.400 47.619 0.00 0.00 39.52 3.18
289 290 2.225491 CGGTCGGATGTGTTTTGAACAT 59.775 45.455 0.00 0.00 44.35 2.71
290 291 3.304391 CGGTCGGATGTGTTTTGAACATT 60.304 43.478 0.00 0.00 44.35 2.71
291 292 3.980775 GGTCGGATGTGTTTTGAACATTG 59.019 43.478 0.00 0.00 44.35 2.82
292 293 4.499019 GGTCGGATGTGTTTTGAACATTGT 60.499 41.667 0.00 0.00 44.35 2.71
293 294 5.278071 GGTCGGATGTGTTTTGAACATTGTA 60.278 40.000 0.00 0.00 44.35 2.41
294 295 5.623673 GTCGGATGTGTTTTGAACATTGTAC 59.376 40.000 0.00 0.00 44.35 2.90
295 296 5.529430 TCGGATGTGTTTTGAACATTGTACT 59.471 36.000 0.00 0.00 44.35 2.73
296 297 6.706716 TCGGATGTGTTTTGAACATTGTACTA 59.293 34.615 0.00 0.00 44.35 1.82
297 298 7.389330 TCGGATGTGTTTTGAACATTGTACTAT 59.611 33.333 0.00 0.00 44.35 2.12
298 299 7.692291 CGGATGTGTTTTGAACATTGTACTATC 59.308 37.037 0.00 0.00 44.35 2.08
299 300 7.692291 GGATGTGTTTTGAACATTGTACTATCG 59.308 37.037 0.00 0.00 44.35 2.92
300 301 6.893759 TGTGTTTTGAACATTGTACTATCGG 58.106 36.000 0.00 0.00 44.35 4.18
301 302 6.706716 TGTGTTTTGAACATTGTACTATCGGA 59.293 34.615 0.00 0.00 44.35 4.55
302 303 7.226918 TGTGTTTTGAACATTGTACTATCGGAA 59.773 33.333 0.00 0.00 44.35 4.30
303 304 8.234546 GTGTTTTGAACATTGTACTATCGGAAT 58.765 33.333 0.00 0.00 44.35 3.01
304 305 9.438228 TGTTTTGAACATTGTACTATCGGAATA 57.562 29.630 0.00 0.00 36.25 1.75
309 310 9.051679 TGAACATTGTACTATCGGAATATTTGG 57.948 33.333 0.00 0.00 0.00 3.28
310 311 9.268268 GAACATTGTACTATCGGAATATTTGGA 57.732 33.333 0.00 0.00 0.00 3.53
311 312 9.621629 AACATTGTACTATCGGAATATTTGGAA 57.378 29.630 0.00 0.00 0.00 3.53
312 313 9.621629 ACATTGTACTATCGGAATATTTGGAAA 57.378 29.630 0.00 0.00 0.00 3.13
337 338 9.974980 AAAAATACTCGCAAATCCTTCTTTAAA 57.025 25.926 0.00 0.00 0.00 1.52
338 339 9.974980 AAAATACTCGCAAATCCTTCTTTAAAA 57.025 25.926 0.00 0.00 0.00 1.52
339 340 9.974980 AAATACTCGCAAATCCTTCTTTAAAAA 57.025 25.926 0.00 0.00 0.00 1.94
359 360 5.560966 AAAATAAATGCAGTGACCTACGG 57.439 39.130 0.00 0.00 0.00 4.02
360 361 4.481368 AATAAATGCAGTGACCTACGGA 57.519 40.909 0.00 0.00 0.00 4.69
361 362 2.851263 AAATGCAGTGACCTACGGAA 57.149 45.000 0.00 0.00 0.00 4.30
362 363 2.386661 AATGCAGTGACCTACGGAAG 57.613 50.000 0.00 0.00 0.00 3.46
363 364 1.557099 ATGCAGTGACCTACGGAAGA 58.443 50.000 0.00 0.00 0.00 2.87
364 365 0.888619 TGCAGTGACCTACGGAAGAG 59.111 55.000 0.00 0.00 0.00 2.85
365 366 0.889306 GCAGTGACCTACGGAAGAGT 59.111 55.000 0.00 0.00 0.00 3.24
366 367 2.089980 GCAGTGACCTACGGAAGAGTA 58.910 52.381 0.00 0.00 0.00 2.59
367 368 2.490903 GCAGTGACCTACGGAAGAGTAA 59.509 50.000 0.00 0.00 0.00 2.24
368 369 3.130693 GCAGTGACCTACGGAAGAGTAAT 59.869 47.826 0.00 0.00 0.00 1.89
369 370 4.381718 GCAGTGACCTACGGAAGAGTAATT 60.382 45.833 0.00 0.00 0.00 1.40
370 371 5.341617 CAGTGACCTACGGAAGAGTAATTC 58.658 45.833 0.00 0.00 0.00 2.17
371 372 4.401837 AGTGACCTACGGAAGAGTAATTCC 59.598 45.833 0.00 0.00 44.54 3.01
372 373 4.401837 GTGACCTACGGAAGAGTAATTCCT 59.598 45.833 4.15 0.00 45.60 3.36
373 374 4.401519 TGACCTACGGAAGAGTAATTCCTG 59.598 45.833 4.15 1.09 45.60 3.86
374 375 3.132467 ACCTACGGAAGAGTAATTCCTGC 59.868 47.826 4.15 0.00 45.60 4.85
375 376 2.693267 ACGGAAGAGTAATTCCTGCC 57.307 50.000 4.15 0.00 45.60 4.85
376 377 1.209747 ACGGAAGAGTAATTCCTGCCC 59.790 52.381 4.15 0.00 45.60 5.36
377 378 1.475213 CGGAAGAGTAATTCCTGCCCC 60.475 57.143 4.15 0.00 45.60 5.80
378 379 1.564348 GGAAGAGTAATTCCTGCCCCA 59.436 52.381 0.00 0.00 44.57 4.96
379 380 2.025321 GGAAGAGTAATTCCTGCCCCAA 60.025 50.000 0.00 0.00 44.57 4.12
380 381 3.563479 GGAAGAGTAATTCCTGCCCCAAA 60.563 47.826 0.00 0.00 44.57 3.28
381 382 4.281657 GAAGAGTAATTCCTGCCCCAAAT 58.718 43.478 0.00 0.00 0.00 2.32
382 383 4.337264 AGAGTAATTCCTGCCCCAAATT 57.663 40.909 0.00 0.00 0.00 1.82
383 384 4.687976 AGAGTAATTCCTGCCCCAAATTT 58.312 39.130 0.00 0.00 0.00 1.82
384 385 5.093677 AGAGTAATTCCTGCCCCAAATTTT 58.906 37.500 0.00 0.00 0.00 1.82
385 386 5.547666 AGAGTAATTCCTGCCCCAAATTTTT 59.452 36.000 0.00 0.00 0.00 1.94
411 412 8.680707 TTTTTAAAACAAGGCAAAAGATTTGC 57.319 26.923 17.18 17.18 44.22 3.68
421 422 5.632244 GCAAAAGATTTGCCATTTCCATT 57.368 34.783 15.12 0.00 39.38 3.16
422 423 5.395642 GCAAAAGATTTGCCATTTCCATTG 58.604 37.500 15.12 0.00 39.38 2.82
423 424 5.181622 GCAAAAGATTTGCCATTTCCATTGA 59.818 36.000 15.12 0.00 39.38 2.57
424 425 6.127842 GCAAAAGATTTGCCATTTCCATTGAT 60.128 34.615 15.12 0.00 39.38 2.57
425 426 7.576098 GCAAAAGATTTGCCATTTCCATTGATT 60.576 33.333 15.12 0.00 39.38 2.57
426 427 8.948145 CAAAAGATTTGCCATTTCCATTGATTA 58.052 29.630 0.00 0.00 0.00 1.75
427 428 9.517868 AAAAGATTTGCCATTTCCATTGATTAA 57.482 25.926 0.00 0.00 0.00 1.40
428 429 8.726870 AAGATTTGCCATTTCCATTGATTAAG 57.273 30.769 0.00 0.00 0.00 1.85
429 430 8.081517 AGATTTGCCATTTCCATTGATTAAGA 57.918 30.769 0.00 0.00 0.00 2.10
430 431 8.542080 AGATTTGCCATTTCCATTGATTAAGAA 58.458 29.630 0.00 0.00 0.00 2.52
431 432 8.726870 ATTTGCCATTTCCATTGATTAAGAAG 57.273 30.769 0.00 0.00 0.00 2.85
432 433 7.479352 TTGCCATTTCCATTGATTAAGAAGA 57.521 32.000 0.00 0.00 0.00 2.87
433 434 7.479352 TGCCATTTCCATTGATTAAGAAGAA 57.521 32.000 0.00 0.00 0.00 2.52
434 435 7.549839 TGCCATTTCCATTGATTAAGAAGAAG 58.450 34.615 0.00 0.00 0.00 2.85
435 436 7.396907 TGCCATTTCCATTGATTAAGAAGAAGA 59.603 33.333 0.00 0.00 0.00 2.87
436 437 7.919621 GCCATTTCCATTGATTAAGAAGAAGAG 59.080 37.037 0.00 0.00 0.00 2.85
437 438 9.182214 CCATTTCCATTGATTAAGAAGAAGAGA 57.818 33.333 0.00 0.00 0.00 3.10
446 447 8.715191 TGATTAAGAAGAAGAGATTTCTCAGC 57.285 34.615 10.07 1.73 45.21 4.26
447 448 8.316946 TGATTAAGAAGAAGAGATTTCTCAGCA 58.683 33.333 10.07 0.00 45.21 4.41
448 449 9.160496 GATTAAGAAGAAGAGATTTCTCAGCAA 57.840 33.333 10.07 0.00 45.21 3.91
449 450 9.683870 ATTAAGAAGAAGAGATTTCTCAGCAAT 57.316 29.630 10.07 0.00 45.21 3.56
450 451 7.614124 AAGAAGAAGAGATTTCTCAGCAATC 57.386 36.000 10.07 0.00 45.21 2.67
451 452 6.114767 AGAAGAAGAGATTTCTCAGCAATCC 58.885 40.000 10.07 0.00 45.21 3.01
452 453 4.779696 AGAAGAGATTTCTCAGCAATCCC 58.220 43.478 10.07 0.00 45.21 3.85
453 454 4.474287 AGAAGAGATTTCTCAGCAATCCCT 59.526 41.667 10.07 0.00 45.21 4.20
454 455 4.153673 AGAGATTTCTCAGCAATCCCTG 57.846 45.455 10.07 0.00 45.21 4.45
455 456 3.779183 AGAGATTTCTCAGCAATCCCTGA 59.221 43.478 10.07 0.00 45.21 3.86
456 457 3.876320 GAGATTTCTCAGCAATCCCTGAC 59.124 47.826 2.69 0.00 42.42 3.51
457 458 2.496899 TTTCTCAGCAATCCCTGACC 57.503 50.000 0.00 0.00 36.96 4.02
458 459 0.620556 TTCTCAGCAATCCCTGACCC 59.379 55.000 0.00 0.00 36.96 4.46
459 460 1.153289 CTCAGCAATCCCTGACCCG 60.153 63.158 0.00 0.00 36.96 5.28
460 461 1.612146 TCAGCAATCCCTGACCCGA 60.612 57.895 0.00 0.00 36.96 5.14
461 462 0.982852 TCAGCAATCCCTGACCCGAT 60.983 55.000 0.00 0.00 36.96 4.18
462 463 0.816825 CAGCAATCCCTGACCCGATG 60.817 60.000 0.00 0.00 34.77 3.84
463 464 1.224592 GCAATCCCTGACCCGATGT 59.775 57.895 0.00 0.00 0.00 3.06
464 465 0.394352 GCAATCCCTGACCCGATGTT 60.394 55.000 0.00 0.00 0.00 2.71
465 466 1.382522 CAATCCCTGACCCGATGTTG 58.617 55.000 0.00 0.00 0.00 3.33
466 467 1.065491 CAATCCCTGACCCGATGTTGA 60.065 52.381 0.00 0.00 0.00 3.18
467 468 1.511613 ATCCCTGACCCGATGTTGAT 58.488 50.000 0.00 0.00 0.00 2.57
468 469 2.168458 TCCCTGACCCGATGTTGATA 57.832 50.000 0.00 0.00 0.00 2.15
469 470 2.039418 TCCCTGACCCGATGTTGATAG 58.961 52.381 0.00 0.00 0.00 2.08
470 471 2.039418 CCCTGACCCGATGTTGATAGA 58.961 52.381 0.00 0.00 0.00 1.98
471 472 2.434336 CCCTGACCCGATGTTGATAGAA 59.566 50.000 0.00 0.00 0.00 2.10
472 473 3.493350 CCCTGACCCGATGTTGATAGAAG 60.493 52.174 0.00 0.00 0.00 2.85
473 474 3.384789 CCTGACCCGATGTTGATAGAAGA 59.615 47.826 0.00 0.00 0.00 2.87
474 475 4.039730 CCTGACCCGATGTTGATAGAAGAT 59.960 45.833 0.00 0.00 0.00 2.40
475 476 5.453903 CCTGACCCGATGTTGATAGAAGATT 60.454 44.000 0.00 0.00 0.00 2.40
476 477 6.239317 CCTGACCCGATGTTGATAGAAGATTA 60.239 42.308 0.00 0.00 0.00 1.75
477 478 6.749139 TGACCCGATGTTGATAGAAGATTAG 58.251 40.000 0.00 0.00 0.00 1.73
478 479 6.549736 TGACCCGATGTTGATAGAAGATTAGA 59.450 38.462 0.00 0.00 0.00 2.10
479 480 7.069455 TGACCCGATGTTGATAGAAGATTAGAA 59.931 37.037 0.00 0.00 0.00 2.10
480 481 7.437748 ACCCGATGTTGATAGAAGATTAGAAG 58.562 38.462 0.00 0.00 0.00 2.85
481 482 7.287927 ACCCGATGTTGATAGAAGATTAGAAGA 59.712 37.037 0.00 0.00 0.00 2.87
482 483 7.812191 CCCGATGTTGATAGAAGATTAGAAGAG 59.188 40.741 0.00 0.00 0.00 2.85
483 484 8.356657 CCGATGTTGATAGAAGATTAGAAGAGT 58.643 37.037 0.00 0.00 0.00 3.24
505 506 8.093659 GAGTAATCTCTGCCCTTTTATCAATC 57.906 38.462 0.00 0.00 37.68 2.67
508 509 7.909485 AATCTCTGCCCTTTTATCAATCAAT 57.091 32.000 0.00 0.00 0.00 2.57
509 510 6.949352 TCTCTGCCCTTTTATCAATCAATC 57.051 37.500 0.00 0.00 0.00 2.67
591 594 1.286880 GCAAATTCAGTGGCGCACT 59.713 52.632 10.83 8.31 46.51 4.40
600 603 1.407936 AGTGGCGCACTGATAGAGAT 58.592 50.000 10.83 0.00 43.63 2.75
661 664 1.804326 GTAATCAGTGCGGTCGCGT 60.804 57.895 5.77 0.00 45.51 6.01
711 714 3.072468 CTACCCCCGGCAGTCGAA 61.072 66.667 0.00 0.00 42.43 3.71
756 768 3.545124 AAACCCATCGCCGTCAGCA 62.545 57.895 0.00 0.00 44.04 4.41
827 843 2.769145 TACGGGCAAGGTTACCCCCT 62.769 60.000 11.52 3.13 43.86 4.79
828 844 2.681591 GGGCAAGGTTACCCCCTC 59.318 66.667 6.92 0.00 40.56 4.30
869 885 3.626217 GTCTCTTTTGTTTTGACCTCCGT 59.374 43.478 0.00 0.00 0.00 4.69
873 892 1.961793 TTGTTTTGACCTCCGTCCAG 58.038 50.000 0.00 0.00 38.32 3.86
878 897 4.083862 GACCTCCGTCCAGCCACC 62.084 72.222 0.00 0.00 32.40 4.61
881 900 4.394712 CTCCGTCCAGCCACCCAC 62.395 72.222 0.00 0.00 0.00 4.61
885 904 3.315949 GTCCAGCCACCCACGGTA 61.316 66.667 0.00 0.00 32.11 4.02
886 905 3.000819 TCCAGCCACCCACGGTAG 61.001 66.667 0.00 0.00 32.11 3.18
887 906 4.778143 CCAGCCACCCACGGTAGC 62.778 72.222 0.00 0.00 40.50 3.58
928 947 1.967343 ATCTCCACTCCTCCCCTCCC 61.967 65.000 0.00 0.00 0.00 4.30
929 948 3.695825 TCCACTCCTCCCCTCCCC 61.696 72.222 0.00 0.00 0.00 4.81
930 949 3.700350 CCACTCCTCCCCTCCCCT 61.700 72.222 0.00 0.00 0.00 4.79
931 950 2.041405 CACTCCTCCCCTCCCCTC 60.041 72.222 0.00 0.00 0.00 4.30
932 951 3.369388 ACTCCTCCCCTCCCCTCC 61.369 72.222 0.00 0.00 0.00 4.30
1016 1035 2.362120 ACCCACCTACCGTCCTCG 60.362 66.667 0.00 0.00 0.00 4.63
1071 1098 2.612115 CTTGCCCTCACCCTCCCT 60.612 66.667 0.00 0.00 0.00 4.20
1072 1099 2.121506 TTGCCCTCACCCTCCCTT 60.122 61.111 0.00 0.00 0.00 3.95
1073 1100 2.203549 CTTGCCCTCACCCTCCCTTC 62.204 65.000 0.00 0.00 0.00 3.46
1116 1155 4.856607 CGCGGCCGGTCTCTTCTC 62.857 72.222 29.38 5.29 0.00 2.87
1117 1156 4.516195 GCGGCCGGTCTCTTCTCC 62.516 72.222 29.38 1.03 0.00 3.71
1118 1157 2.756283 CGGCCGGTCTCTTCTCCT 60.756 66.667 20.10 0.00 0.00 3.69
1119 1158 2.776913 CGGCCGGTCTCTTCTCCTC 61.777 68.421 20.10 0.00 0.00 3.71
1120 1159 2.428085 GGCCGGTCTCTTCTCCTCC 61.428 68.421 1.90 0.00 0.00 4.30
1121 1160 2.428085 GCCGGTCTCTTCTCCTCCC 61.428 68.421 1.90 0.00 0.00 4.30
1122 1161 1.308326 CCGGTCTCTTCTCCTCCCT 59.692 63.158 0.00 0.00 0.00 4.20
1125 1164 1.775385 GGTCTCTTCTCCTCCCTCTG 58.225 60.000 0.00 0.00 0.00 3.35
1240 1305 0.109504 GCTTCTTCGAGACGCTCTGT 60.110 55.000 5.53 0.00 36.66 3.41
1559 1634 4.082949 GGAAATTATACCGTGCATTAGCCC 60.083 45.833 0.00 0.00 41.13 5.19
1563 1638 2.916502 TACCGTGCATTAGCCCGCTG 62.917 60.000 0.00 0.00 40.42 5.18
1574 1649 2.038837 GCCCGCTGGTTGGTTCTAC 61.039 63.158 0.00 0.00 0.00 2.59
1652 1727 5.702865 TCGAAGAAATGCAAAATTGAGGAG 58.297 37.500 0.00 0.00 0.00 3.69
1875 1956 9.473640 GGGTAAATACTCTAATTTTACTCTCCG 57.526 37.037 0.00 0.00 34.78 4.63
1958 2043 3.627395 TGTGGGTTCATATGACAGGTC 57.373 47.619 4.48 0.00 0.00 3.85
2044 2129 9.135189 CAAGGTATCAAAATATTCCATCCAGAA 57.865 33.333 0.00 0.00 0.00 3.02
2045 2130 9.713684 AAGGTATCAAAATATTCCATCCAGAAA 57.286 29.630 0.00 0.00 0.00 2.52
2046 2131 9.713684 AGGTATCAAAATATTCCATCCAGAAAA 57.286 29.630 0.00 0.00 0.00 2.29
2095 2181 6.859112 AGTGTCACTTGTTACCATCTCTAT 57.141 37.500 0.00 0.00 0.00 1.98
2096 2182 7.956328 AGTGTCACTTGTTACCATCTCTATA 57.044 36.000 0.00 0.00 0.00 1.31
2127 2213 9.087424 GTCTAATTTGTAGAAATTCCCATTTGC 57.913 33.333 13.37 0.00 40.31 3.68
2206 2292 1.618861 CAGCAAGTCGAGGTTAGACG 58.381 55.000 0.00 0.00 42.97 4.18
2219 2305 2.411031 GGTTAGACGCGACACACAATTG 60.411 50.000 15.93 3.24 0.00 2.32
2239 2325 3.929094 TGGTCACGGTACCAAAATAGTC 58.071 45.455 13.54 0.00 46.55 2.59
2244 2330 6.158598 GTCACGGTACCAAAATAGTCTGTAA 58.841 40.000 13.54 0.00 0.00 2.41
2466 2555 2.106338 TCCAGATGAACCAAGCACTTGA 59.894 45.455 11.94 0.00 42.93 3.02
2610 2699 1.136305 GTTAGACATGGCTCTACCGCA 59.864 52.381 2.95 0.00 43.94 5.69
2711 2830 9.311916 GATAGTTAATATGCATCTGATCCTGAC 57.688 37.037 0.19 0.00 0.00 3.51
2760 2881 2.859273 ATTTCTGGGAGGCGAGTGCG 62.859 60.000 0.00 0.00 44.10 5.34
2805 2926 0.251474 AGCAAAGCCAGGAGAATGCA 60.251 50.000 8.96 0.00 36.30 3.96
2832 2953 1.202143 GCACCGAATTTCGATGGTTCC 60.202 52.381 19.91 0.00 43.74 3.62
2882 3003 0.878416 TGCACGCCTTGGTAATTCAC 59.122 50.000 0.00 0.00 0.00 3.18
2883 3004 1.165270 GCACGCCTTGGTAATTCACT 58.835 50.000 0.00 0.00 0.00 3.41
2904 3025 4.096382 ACTTTGGACTAACAGCTTTGTGTG 59.904 41.667 0.00 0.00 0.00 3.82
2905 3026 2.571212 TGGACTAACAGCTTTGTGTGG 58.429 47.619 0.00 0.00 0.00 4.17
2908 3029 3.003378 GGACTAACAGCTTTGTGTGGTTC 59.997 47.826 0.00 0.00 0.00 3.62
3118 3246 3.698820 GGTACCAAGACGGCCGGT 61.699 66.667 31.76 19.47 39.03 5.28
3123 3251 2.493030 CAAGACGGCCGGTATCGT 59.507 61.111 31.76 13.72 42.67 3.73
3127 3255 2.836360 ACGGCCGGTATCGTGGAT 60.836 61.111 31.76 0.00 38.25 3.41
3187 3317 3.953874 TCTTCTCGTGTCGATGAGATC 57.046 47.619 13.51 0.00 42.66 2.75
3190 3320 5.057149 TCTTCTCGTGTCGATGAGATCATA 58.943 41.667 13.51 1.72 42.66 2.15
3198 3328 4.154918 TGTCGATGAGATCATATGGTCTCG 59.845 45.833 31.34 23.81 42.93 4.04
3203 3333 6.307558 CGATGAGATCATATGGTCTCGAAAAG 59.692 42.308 31.34 20.26 42.93 2.27
3214 3345 7.829378 ATGGTCTCGAAAAGTAGTAAATCAC 57.171 36.000 0.00 0.00 0.00 3.06
3279 3410 2.858344 CCTAATGTGTAAGAACTCGGCG 59.142 50.000 0.00 0.00 0.00 6.46
3303 3434 5.065731 GGATATTGGGACGATACTACTACCG 59.934 48.000 0.00 0.00 0.00 4.02
3377 3509 8.998277 TTATCCTCAGCATATATACTACTCCC 57.002 38.462 0.00 0.00 0.00 4.30
3378 3510 6.660147 TCCTCAGCATATATACTACTCCCT 57.340 41.667 0.00 0.00 0.00 4.20
3379 3511 6.664714 TCCTCAGCATATATACTACTCCCTC 58.335 44.000 0.00 0.00 0.00 4.30
3380 3512 5.830991 CCTCAGCATATATACTACTCCCTCC 59.169 48.000 0.00 0.00 0.00 4.30
3381 3513 5.437946 TCAGCATATATACTACTCCCTCCG 58.562 45.833 0.00 0.00 0.00 4.63
3382 3514 5.045066 TCAGCATATATACTACTCCCTCCGT 60.045 44.000 0.00 0.00 0.00 4.69
3383 3515 6.157471 TCAGCATATATACTACTCCCTCCGTA 59.843 42.308 0.00 0.00 0.00 4.02
3384 3516 6.827251 CAGCATATATACTACTCCCTCCGTAA 59.173 42.308 0.00 0.00 0.00 3.18
3385 3517 7.338703 CAGCATATATACTACTCCCTCCGTAAA 59.661 40.741 0.00 0.00 0.00 2.01
3386 3518 7.338957 AGCATATATACTACTCCCTCCGTAAAC 59.661 40.741 0.00 0.00 0.00 2.01
3387 3519 7.338957 GCATATATACTACTCCCTCCGTAAACT 59.661 40.741 0.00 0.00 0.00 2.66
3388 3520 9.896645 CATATATACTACTCCCTCCGTAAACTA 57.103 37.037 0.00 0.00 0.00 2.24
3391 3523 5.848833 ACTACTCCCTCCGTAAACTAATG 57.151 43.478 0.00 0.00 0.00 1.90
3392 3524 5.267587 ACTACTCCCTCCGTAAACTAATGT 58.732 41.667 0.00 0.00 0.00 2.71
3393 3525 6.426587 ACTACTCCCTCCGTAAACTAATGTA 58.573 40.000 0.00 0.00 0.00 2.29
3394 3526 6.891908 ACTACTCCCTCCGTAAACTAATGTAA 59.108 38.462 0.00 0.00 0.00 2.41
3395 3527 6.218108 ACTCCCTCCGTAAACTAATGTAAG 57.782 41.667 0.00 0.00 0.00 2.34
3396 3528 5.954150 ACTCCCTCCGTAAACTAATGTAAGA 59.046 40.000 0.00 0.00 0.00 2.10
3397 3529 6.096564 ACTCCCTCCGTAAACTAATGTAAGAG 59.903 42.308 0.00 0.00 0.00 2.85
3398 3530 5.954150 TCCCTCCGTAAACTAATGTAAGAGT 59.046 40.000 0.00 0.00 0.00 3.24
3399 3531 6.040878 CCCTCCGTAAACTAATGTAAGAGTG 58.959 44.000 0.00 0.00 0.00 3.51
3400 3532 6.350780 CCCTCCGTAAACTAATGTAAGAGTGT 60.351 42.308 0.00 0.00 0.00 3.55
3401 3533 7.095270 CCTCCGTAAACTAATGTAAGAGTGTT 58.905 38.462 0.00 0.00 0.00 3.32
3402 3534 7.601508 CCTCCGTAAACTAATGTAAGAGTGTTT 59.398 37.037 0.00 0.00 0.00 2.83
3403 3535 9.630098 CTCCGTAAACTAATGTAAGAGTGTTTA 57.370 33.333 0.00 0.00 0.00 2.01
3404 3536 9.630098 TCCGTAAACTAATGTAAGAGTGTTTAG 57.370 33.333 0.00 0.00 32.78 1.85
3405 3537 9.630098 CCGTAAACTAATGTAAGAGTGTTTAGA 57.370 33.333 0.00 0.00 32.78 2.10
3450 3582 9.530633 AAACGCTCTTATATTAGTTTACAGAGG 57.469 33.333 0.00 0.00 31.14 3.69
3451 3583 7.659186 ACGCTCTTATATTAGTTTACAGAGGG 58.341 38.462 8.36 8.36 42.53 4.30
3452 3584 7.504911 ACGCTCTTATATTAGTTTACAGAGGGA 59.495 37.037 14.96 0.00 40.49 4.20
3453 3585 8.024285 CGCTCTTATATTAGTTTACAGAGGGAG 58.976 40.741 4.76 0.00 40.49 4.30
3454 3586 8.862085 GCTCTTATATTAGTTTACAGAGGGAGT 58.138 37.037 0.00 0.00 0.00 3.85
3458 3590 9.940974 TTATATTAGTTTACAGAGGGAGTACCA 57.059 33.333 0.00 0.00 43.89 3.25
3459 3591 8.849543 ATATTAGTTTACAGAGGGAGTACCAA 57.150 34.615 0.00 0.00 43.89 3.67
3460 3592 6.600882 TTAGTTTACAGAGGGAGTACCAAG 57.399 41.667 0.00 0.00 43.89 3.61
3569 3704 2.407090 TCAATCACAGCGAACAGTGAG 58.593 47.619 0.00 0.00 44.37 3.51
3614 3750 5.007234 TGTTGTTCACTCATTTCGGTACTTG 59.993 40.000 0.00 0.00 0.00 3.16
3643 3780 2.221169 TCACCAATCACAGTGAACAGC 58.779 47.619 7.50 0.00 39.96 4.40
3675 3812 6.479001 TCGCCAGCTTTAAGTTCATAATAGAC 59.521 38.462 0.00 0.00 0.00 2.59
3682 3819 9.810545 GCTTTAAGTTCATAATAGACACTCTCT 57.189 33.333 0.00 0.00 0.00 3.10
3685 3822 9.702253 TTAAGTTCATAATAGACACTCTCTCCT 57.298 33.333 0.00 0.00 0.00 3.69
3686 3823 8.602472 AAGTTCATAATAGACACTCTCTCCTT 57.398 34.615 0.00 0.00 0.00 3.36
3701 3838 6.937465 ACTCTCTCCTTTCCTTTCAACATTAC 59.063 38.462 0.00 0.00 0.00 1.89
3750 3892 3.676172 TGGAAGTATACAGACGCGTTTTG 59.324 43.478 15.53 17.87 0.00 2.44
3762 3904 0.716666 GCGTTTTGGCGTGTTTGTTT 59.283 45.000 0.00 0.00 0.00 2.83
3829 3972 2.224450 CCTAAAACAGTGAACGGAGGGT 60.224 50.000 0.00 0.00 0.00 4.34
3831 3974 0.544697 AAACAGTGAACGGAGGGTGT 59.455 50.000 0.00 0.00 0.00 4.16
3832 3975 1.416243 AACAGTGAACGGAGGGTGTA 58.584 50.000 0.00 0.00 0.00 2.90
3833 3976 0.966920 ACAGTGAACGGAGGGTGTAG 59.033 55.000 0.00 0.00 0.00 2.74
3834 3977 0.389948 CAGTGAACGGAGGGTGTAGC 60.390 60.000 0.00 0.00 0.00 3.58
3835 3978 0.830444 AGTGAACGGAGGGTGTAGCA 60.830 55.000 0.00 0.00 0.00 3.49
3837 3980 0.249120 TGAACGGAGGGTGTAGCATG 59.751 55.000 0.00 0.00 0.00 4.06
3838 3981 1.078426 AACGGAGGGTGTAGCATGC 60.078 57.895 10.51 10.51 0.00 4.06
3840 3983 2.900273 GGAGGGTGTAGCATGCGA 59.100 61.111 13.01 3.59 0.00 5.10
3841 3984 1.521681 GGAGGGTGTAGCATGCGAC 60.522 63.158 22.40 22.40 0.00 5.19
3842 3985 1.517832 GAGGGTGTAGCATGCGACT 59.482 57.895 27.69 10.88 0.00 4.18
3843 3986 0.108138 GAGGGTGTAGCATGCGACTT 60.108 55.000 27.69 13.27 0.00 3.01
3844 3987 0.391661 AGGGTGTAGCATGCGACTTG 60.392 55.000 27.69 0.00 0.00 3.16
3845 3988 1.425428 GGTGTAGCATGCGACTTGC 59.575 57.895 27.69 18.25 46.70 4.01
3875 4027 4.809673 CAGCTGTTGGAACCTTTTAATCC 58.190 43.478 5.25 0.00 0.00 3.01
3886 4038 7.895429 TGGAACCTTTTAATCCTCATCAGAAAT 59.105 33.333 0.00 0.00 34.24 2.17
3923 4097 2.560105 ACCAGCAGCATTCCTTCTTTTC 59.440 45.455 0.00 0.00 0.00 2.29
3976 4157 2.676750 CGCAGGCAGAAATGGTAGTACA 60.677 50.000 2.06 0.00 0.00 2.90
4098 4283 1.945394 CTCCGCTGGATCTCATTTTGG 59.055 52.381 0.00 0.00 0.00 3.28
4105 4290 5.451937 CGCTGGATCTCATTTTGGAGTAGTA 60.452 44.000 0.00 0.00 36.30 1.82
4152 4337 6.879276 AAAGTTTTAGTTTCTACTCAGGCC 57.121 37.500 0.00 0.00 35.78 5.19
4153 4338 4.566987 AGTTTTAGTTTCTACTCAGGCCG 58.433 43.478 0.00 0.00 35.78 6.13
4154 4339 4.040095 AGTTTTAGTTTCTACTCAGGCCGT 59.960 41.667 0.00 0.00 35.78 5.68
4155 4340 3.587797 TTAGTTTCTACTCAGGCCGTG 57.412 47.619 0.00 0.00 35.78 4.94
4156 4341 1.339097 AGTTTCTACTCAGGCCGTGT 58.661 50.000 0.00 2.21 0.00 4.49
4157 4342 1.692519 AGTTTCTACTCAGGCCGTGTT 59.307 47.619 0.00 0.00 0.00 3.32
4158 4343 2.104281 AGTTTCTACTCAGGCCGTGTTT 59.896 45.455 0.00 0.00 0.00 2.83
4159 4344 2.450609 TTCTACTCAGGCCGTGTTTC 57.549 50.000 0.00 0.00 0.00 2.78
4160 4345 1.629043 TCTACTCAGGCCGTGTTTCT 58.371 50.000 0.00 0.00 0.00 2.52
4161 4346 1.544691 TCTACTCAGGCCGTGTTTCTC 59.455 52.381 0.00 0.00 0.00 2.87
4162 4347 1.546476 CTACTCAGGCCGTGTTTCTCT 59.454 52.381 0.00 0.00 0.00 3.10
4163 4348 0.759346 ACTCAGGCCGTGTTTCTCTT 59.241 50.000 0.00 0.00 0.00 2.85
4164 4349 1.141053 ACTCAGGCCGTGTTTCTCTTT 59.859 47.619 0.00 0.00 0.00 2.52
4165 4350 2.222027 CTCAGGCCGTGTTTCTCTTTT 58.778 47.619 0.00 0.00 0.00 2.27
4166 4351 2.218603 TCAGGCCGTGTTTCTCTTTTC 58.781 47.619 0.00 0.00 0.00 2.29
4167 4352 1.069906 CAGGCCGTGTTTCTCTTTTCG 60.070 52.381 0.00 0.00 0.00 3.46
4168 4353 0.385598 GGCCGTGTTTCTCTTTTCGC 60.386 55.000 0.00 0.00 0.00 4.70
4169 4354 0.385598 GCCGTGTTTCTCTTTTCGCC 60.386 55.000 0.00 0.00 0.00 5.54
4170 4355 0.110823 CCGTGTTTCTCTTTTCGCCG 60.111 55.000 0.00 0.00 0.00 6.46
4171 4356 0.110823 CGTGTTTCTCTTTTCGCCGG 60.111 55.000 0.00 0.00 0.00 6.13
4172 4357 1.223187 GTGTTTCTCTTTTCGCCGGA 58.777 50.000 5.05 0.00 0.00 5.14
4173 4358 1.194772 GTGTTTCTCTTTTCGCCGGAG 59.805 52.381 5.05 0.00 0.00 4.63
4174 4359 0.166161 GTTTCTCTTTTCGCCGGAGC 59.834 55.000 5.05 0.00 0.00 4.70
4175 4360 0.250124 TTTCTCTTTTCGCCGGAGCA 60.250 50.000 5.05 0.00 39.83 4.26
4176 4361 0.949105 TTCTCTTTTCGCCGGAGCAC 60.949 55.000 5.05 0.00 39.83 4.40
4177 4362 2.730672 CTCTTTTCGCCGGAGCACG 61.731 63.158 5.05 0.00 39.83 5.34
4198 4383 2.585153 GGAAACCCTCTCGGCCTC 59.415 66.667 0.00 0.00 33.26 4.70
4199 4384 1.990614 GGAAACCCTCTCGGCCTCT 60.991 63.158 0.00 0.00 33.26 3.69
4200 4385 1.219393 GAAACCCTCTCGGCCTCTG 59.781 63.158 0.00 0.00 33.26 3.35
4201 4386 2.860972 GAAACCCTCTCGGCCTCTGC 62.861 65.000 0.00 0.00 33.26 4.26
4202 4387 4.704103 ACCCTCTCGGCCTCTGCA 62.704 66.667 0.00 0.00 40.13 4.41
4203 4388 3.160047 CCCTCTCGGCCTCTGCAT 61.160 66.667 0.00 0.00 40.13 3.96
4204 4389 2.420890 CCTCTCGGCCTCTGCATC 59.579 66.667 0.00 0.00 40.13 3.91
4205 4390 2.027314 CTCTCGGCCTCTGCATCG 59.973 66.667 0.00 0.00 40.13 3.84
4206 4391 3.496875 CTCTCGGCCTCTGCATCGG 62.497 68.421 0.00 0.00 40.13 4.18
4207 4392 3.531207 CTCGGCCTCTGCATCGGA 61.531 66.667 0.00 0.00 40.13 4.55
4208 4393 3.074369 TCGGCCTCTGCATCGGAA 61.074 61.111 0.00 0.00 40.13 4.30
4209 4394 2.587194 CGGCCTCTGCATCGGAAG 60.587 66.667 0.00 0.00 40.13 3.46
4220 4405 3.056458 TCGGAAGATGCACACCGT 58.944 55.556 17.55 0.00 44.72 4.83
4221 4406 1.369692 TCGGAAGATGCACACCGTT 59.630 52.632 17.55 0.00 44.72 4.44
4222 4407 0.604073 TCGGAAGATGCACACCGTTA 59.396 50.000 17.55 2.65 44.72 3.18
4223 4408 1.001068 TCGGAAGATGCACACCGTTAA 59.999 47.619 17.55 2.09 44.72 2.01
4224 4409 1.801771 CGGAAGATGCACACCGTTAAA 59.198 47.619 12.40 0.00 40.42 1.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 2.316108 GGTTTTGACCCATTGACTGGT 58.684 47.619 0.00 0.00 44.30 4.00
11 12 1.269448 CGGTTTTGACCCATTGACTGG 59.731 52.381 0.00 0.00 45.51 4.00
12 13 1.269448 CCGGTTTTGACCCATTGACTG 59.731 52.381 0.00 0.00 0.00 3.51
13 14 1.133606 ACCGGTTTTGACCCATTGACT 60.134 47.619 0.00 0.00 0.00 3.41
14 15 1.268625 GACCGGTTTTGACCCATTGAC 59.731 52.381 9.42 0.00 0.00 3.18
15 16 1.133761 TGACCGGTTTTGACCCATTGA 60.134 47.619 9.42 0.00 0.00 2.57
16 17 1.323412 TGACCGGTTTTGACCCATTG 58.677 50.000 9.42 0.00 0.00 2.82
17 18 1.684450 GTTGACCGGTTTTGACCCATT 59.316 47.619 9.42 0.00 0.00 3.16
18 19 1.133606 AGTTGACCGGTTTTGACCCAT 60.134 47.619 9.42 0.00 0.00 4.00
19 20 0.256464 AGTTGACCGGTTTTGACCCA 59.744 50.000 9.42 0.00 0.00 4.51
20 21 0.666374 CAGTTGACCGGTTTTGACCC 59.334 55.000 9.42 0.00 0.00 4.46
21 22 0.666374 CCAGTTGACCGGTTTTGACC 59.334 55.000 9.42 0.00 0.00 4.02
22 23 0.666374 CCCAGTTGACCGGTTTTGAC 59.334 55.000 9.42 5.48 0.00 3.18
23 24 0.547075 TCCCAGTTGACCGGTTTTGA 59.453 50.000 9.42 0.00 0.00 2.69
24 25 0.951558 CTCCCAGTTGACCGGTTTTG 59.048 55.000 9.42 5.04 0.00 2.44
25 26 0.841289 TCTCCCAGTTGACCGGTTTT 59.159 50.000 9.42 0.00 0.00 2.43
26 27 0.396811 CTCTCCCAGTTGACCGGTTT 59.603 55.000 9.42 0.00 0.00 3.27
27 28 0.471211 TCTCTCCCAGTTGACCGGTT 60.471 55.000 9.42 0.00 0.00 4.44
28 29 0.471211 TTCTCTCCCAGTTGACCGGT 60.471 55.000 6.92 6.92 0.00 5.28
29 30 0.685097 TTTCTCTCCCAGTTGACCGG 59.315 55.000 0.00 0.00 0.00 5.28
30 31 2.289694 ACATTTCTCTCCCAGTTGACCG 60.290 50.000 0.00 0.00 0.00 4.79
31 32 3.425162 ACATTTCTCTCCCAGTTGACC 57.575 47.619 0.00 0.00 0.00 4.02
32 33 4.389374 TCAACATTTCTCTCCCAGTTGAC 58.611 43.478 0.00 0.00 40.01 3.18
33 34 4.705110 TCAACATTTCTCTCCCAGTTGA 57.295 40.909 0.00 0.00 41.88 3.18
34 35 5.105997 GGATTCAACATTTCTCTCCCAGTTG 60.106 44.000 0.00 0.00 38.08 3.16
35 36 5.012893 GGATTCAACATTTCTCTCCCAGTT 58.987 41.667 0.00 0.00 0.00 3.16
36 37 4.290722 AGGATTCAACATTTCTCTCCCAGT 59.709 41.667 0.00 0.00 0.00 4.00
37 38 4.639310 CAGGATTCAACATTTCTCTCCCAG 59.361 45.833 0.00 0.00 0.00 4.45
38 39 4.568380 CCAGGATTCAACATTTCTCTCCCA 60.568 45.833 0.00 0.00 0.00 4.37
39 40 3.950395 CCAGGATTCAACATTTCTCTCCC 59.050 47.826 0.00 0.00 0.00 4.30
40 41 3.379688 GCCAGGATTCAACATTTCTCTCC 59.620 47.826 0.00 0.00 0.00 3.71
41 42 3.379688 GGCCAGGATTCAACATTTCTCTC 59.620 47.826 0.00 0.00 0.00 3.20
42 43 3.245371 TGGCCAGGATTCAACATTTCTCT 60.245 43.478 0.00 0.00 0.00 3.10
43 44 3.091545 TGGCCAGGATTCAACATTTCTC 58.908 45.455 0.00 0.00 0.00 2.87
44 45 3.094572 CTGGCCAGGATTCAACATTTCT 58.905 45.455 26.14 0.00 0.00 2.52
45 46 2.827921 ACTGGCCAGGATTCAACATTTC 59.172 45.455 35.42 0.00 0.00 2.17
46 47 2.893424 ACTGGCCAGGATTCAACATTT 58.107 42.857 35.42 8.04 0.00 2.32
47 48 2.610438 ACTGGCCAGGATTCAACATT 57.390 45.000 35.42 8.61 0.00 2.71
48 49 2.610438 AACTGGCCAGGATTCAACAT 57.390 45.000 35.42 9.41 0.00 2.71
49 50 2.364970 CAAAACTGGCCAGGATTCAACA 59.635 45.455 35.42 0.00 0.00 3.33
50 51 2.627699 TCAAAACTGGCCAGGATTCAAC 59.372 45.455 35.42 0.00 0.00 3.18
51 52 2.892852 CTCAAAACTGGCCAGGATTCAA 59.107 45.455 35.42 18.73 0.00 2.69
52 53 2.108075 TCTCAAAACTGGCCAGGATTCA 59.892 45.455 35.42 16.19 0.00 2.57
53 54 2.751806 CTCTCAAAACTGGCCAGGATTC 59.248 50.000 35.42 0.00 0.00 2.52
54 55 2.108952 ACTCTCAAAACTGGCCAGGATT 59.891 45.455 35.42 25.90 0.00 3.01
55 56 1.707427 ACTCTCAAAACTGGCCAGGAT 59.293 47.619 35.42 21.67 0.00 3.24
56 57 1.140312 ACTCTCAAAACTGGCCAGGA 58.860 50.000 35.42 21.56 0.00 3.86
57 58 1.610522 CAACTCTCAAAACTGGCCAGG 59.389 52.381 35.42 18.44 0.00 4.45
58 59 1.610522 CCAACTCTCAAAACTGGCCAG 59.389 52.381 31.60 31.60 0.00 4.85
59 60 1.691196 CCAACTCTCAAAACTGGCCA 58.309 50.000 4.71 4.71 0.00 5.36
60 61 0.961753 CCCAACTCTCAAAACTGGCC 59.038 55.000 0.00 0.00 0.00 5.36
61 62 0.961753 CCCCAACTCTCAAAACTGGC 59.038 55.000 0.00 0.00 0.00 4.85
62 63 2.362077 CAACCCCAACTCTCAAAACTGG 59.638 50.000 0.00 0.00 0.00 4.00
63 64 3.023832 ACAACCCCAACTCTCAAAACTG 58.976 45.455 0.00 0.00 0.00 3.16
64 65 3.382083 ACAACCCCAACTCTCAAAACT 57.618 42.857 0.00 0.00 0.00 2.66
65 66 5.784578 ATTACAACCCCAACTCTCAAAAC 57.215 39.130 0.00 0.00 0.00 2.43
66 67 6.800072 AAATTACAACCCCAACTCTCAAAA 57.200 33.333 0.00 0.00 0.00 2.44
67 68 7.229907 GTCTAAATTACAACCCCAACTCTCAAA 59.770 37.037 0.00 0.00 0.00 2.69
68 69 6.713450 GTCTAAATTACAACCCCAACTCTCAA 59.287 38.462 0.00 0.00 0.00 3.02
69 70 6.235664 GTCTAAATTACAACCCCAACTCTCA 58.764 40.000 0.00 0.00 0.00 3.27
70 71 5.350640 CGTCTAAATTACAACCCCAACTCTC 59.649 44.000 0.00 0.00 0.00 3.20
71 72 5.243207 CGTCTAAATTACAACCCCAACTCT 58.757 41.667 0.00 0.00 0.00 3.24
72 73 4.393990 CCGTCTAAATTACAACCCCAACTC 59.606 45.833 0.00 0.00 0.00 3.01
73 74 4.202493 ACCGTCTAAATTACAACCCCAACT 60.202 41.667 0.00 0.00 0.00 3.16
74 75 4.074259 ACCGTCTAAATTACAACCCCAAC 58.926 43.478 0.00 0.00 0.00 3.77
75 76 4.370094 ACCGTCTAAATTACAACCCCAA 57.630 40.909 0.00 0.00 0.00 4.12
76 77 5.697082 ATACCGTCTAAATTACAACCCCA 57.303 39.130 0.00 0.00 0.00 4.96
77 78 5.297527 CCAATACCGTCTAAATTACAACCCC 59.702 44.000 0.00 0.00 0.00 4.95
78 79 6.114767 TCCAATACCGTCTAAATTACAACCC 58.885 40.000 0.00 0.00 0.00 4.11
79 80 6.820152 ACTCCAATACCGTCTAAATTACAACC 59.180 38.462 0.00 0.00 0.00 3.77
80 81 7.838771 ACTCCAATACCGTCTAAATTACAAC 57.161 36.000 0.00 0.00 0.00 3.32
81 82 7.276218 CGAACTCCAATACCGTCTAAATTACAA 59.724 37.037 0.00 0.00 0.00 2.41
82 83 6.753279 CGAACTCCAATACCGTCTAAATTACA 59.247 38.462 0.00 0.00 0.00 2.41
83 84 6.199719 CCGAACTCCAATACCGTCTAAATTAC 59.800 42.308 0.00 0.00 0.00 1.89
84 85 6.275335 CCGAACTCCAATACCGTCTAAATTA 58.725 40.000 0.00 0.00 0.00 1.40
85 86 5.114081 CCGAACTCCAATACCGTCTAAATT 58.886 41.667 0.00 0.00 0.00 1.82
86 87 4.442472 CCCGAACTCCAATACCGTCTAAAT 60.442 45.833 0.00 0.00 0.00 1.40
87 88 3.119029 CCCGAACTCCAATACCGTCTAAA 60.119 47.826 0.00 0.00 0.00 1.85
88 89 2.428171 CCCGAACTCCAATACCGTCTAA 59.572 50.000 0.00 0.00 0.00 2.10
89 90 2.026641 CCCGAACTCCAATACCGTCTA 58.973 52.381 0.00 0.00 0.00 2.59
90 91 0.822164 CCCGAACTCCAATACCGTCT 59.178 55.000 0.00 0.00 0.00 4.18
91 92 0.533951 ACCCGAACTCCAATACCGTC 59.466 55.000 0.00 0.00 0.00 4.79
92 93 0.978907 AACCCGAACTCCAATACCGT 59.021 50.000 0.00 0.00 0.00 4.83
93 94 1.338389 ACAACCCGAACTCCAATACCG 60.338 52.381 0.00 0.00 0.00 4.02
94 95 2.484742 ACAACCCGAACTCCAATACC 57.515 50.000 0.00 0.00 0.00 2.73
95 96 6.505044 AATTTACAACCCGAACTCCAATAC 57.495 37.500 0.00 0.00 0.00 1.89
96 97 7.550196 GTCTAATTTACAACCCGAACTCCAATA 59.450 37.037 0.00 0.00 0.00 1.90
97 98 6.373495 GTCTAATTTACAACCCGAACTCCAAT 59.627 38.462 0.00 0.00 0.00 3.16
98 99 5.702209 GTCTAATTTACAACCCGAACTCCAA 59.298 40.000 0.00 0.00 0.00 3.53
99 100 5.012354 AGTCTAATTTACAACCCGAACTCCA 59.988 40.000 0.00 0.00 0.00 3.86
100 101 5.485620 AGTCTAATTTACAACCCGAACTCC 58.514 41.667 0.00 0.00 0.00 3.85
101 102 6.755607 CCTAGTCTAATTTACAACCCGAACTC 59.244 42.308 0.00 0.00 0.00 3.01
102 103 6.351626 CCCTAGTCTAATTTACAACCCGAACT 60.352 42.308 0.00 0.00 0.00 3.01
103 104 5.814188 CCCTAGTCTAATTTACAACCCGAAC 59.186 44.000 0.00 0.00 0.00 3.95
104 105 5.627503 GCCCTAGTCTAATTTACAACCCGAA 60.628 44.000 0.00 0.00 0.00 4.30
105 106 4.141869 GCCCTAGTCTAATTTACAACCCGA 60.142 45.833 0.00 0.00 0.00 5.14
106 107 4.124970 GCCCTAGTCTAATTTACAACCCG 58.875 47.826 0.00 0.00 0.00 5.28
107 108 5.106876 TGCCCTAGTCTAATTTACAACCC 57.893 43.478 0.00 0.00 0.00 4.11
108 109 7.122204 ACATTTGCCCTAGTCTAATTTACAACC 59.878 37.037 0.00 0.00 0.00 3.77
109 110 8.051901 ACATTTGCCCTAGTCTAATTTACAAC 57.948 34.615 0.00 0.00 0.00 3.32
110 111 8.107095 AGACATTTGCCCTAGTCTAATTTACAA 58.893 33.333 0.00 0.00 39.40 2.41
111 112 7.552687 CAGACATTTGCCCTAGTCTAATTTACA 59.447 37.037 0.00 0.00 39.17 2.41
112 113 7.012421 CCAGACATTTGCCCTAGTCTAATTTAC 59.988 40.741 0.00 0.00 39.17 2.01
113 114 7.054124 CCAGACATTTGCCCTAGTCTAATTTA 58.946 38.462 0.00 0.00 39.17 1.40
114 115 5.888161 CCAGACATTTGCCCTAGTCTAATTT 59.112 40.000 0.00 0.00 39.17 1.82
115 116 5.440610 CCAGACATTTGCCCTAGTCTAATT 58.559 41.667 0.00 0.00 39.17 1.40
116 117 4.141390 CCCAGACATTTGCCCTAGTCTAAT 60.141 45.833 0.00 0.00 39.17 1.73
117 118 3.199946 CCCAGACATTTGCCCTAGTCTAA 59.800 47.826 0.00 0.00 39.17 2.10
118 119 2.771943 CCCAGACATTTGCCCTAGTCTA 59.228 50.000 0.00 0.00 39.17 2.59
119 120 1.561542 CCCAGACATTTGCCCTAGTCT 59.438 52.381 0.00 0.00 41.70 3.24
120 121 1.408822 CCCCAGACATTTGCCCTAGTC 60.409 57.143 0.00 0.00 0.00 2.59
121 122 0.625849 CCCCAGACATTTGCCCTAGT 59.374 55.000 0.00 0.00 0.00 2.57
122 123 0.625849 ACCCCAGACATTTGCCCTAG 59.374 55.000 0.00 0.00 0.00 3.02
123 124 1.080638 AACCCCAGACATTTGCCCTA 58.919 50.000 0.00 0.00 0.00 3.53
124 125 0.542702 CAACCCCAGACATTTGCCCT 60.543 55.000 0.00 0.00 0.00 5.19
125 126 0.541764 TCAACCCCAGACATTTGCCC 60.542 55.000 0.00 0.00 0.00 5.36
126 127 1.337118 TTCAACCCCAGACATTTGCC 58.663 50.000 0.00 0.00 0.00 4.52
127 128 3.683365 ATTTCAACCCCAGACATTTGC 57.317 42.857 0.00 0.00 0.00 3.68
128 129 5.111293 GCATATTTCAACCCCAGACATTTG 58.889 41.667 0.00 0.00 0.00 2.32
129 130 4.776837 TGCATATTTCAACCCCAGACATTT 59.223 37.500 0.00 0.00 0.00 2.32
130 131 4.160252 GTGCATATTTCAACCCCAGACATT 59.840 41.667 0.00 0.00 0.00 2.71
131 132 3.701040 GTGCATATTTCAACCCCAGACAT 59.299 43.478 0.00 0.00 0.00 3.06
132 133 3.088532 GTGCATATTTCAACCCCAGACA 58.911 45.455 0.00 0.00 0.00 3.41
133 134 3.356290 AGTGCATATTTCAACCCCAGAC 58.644 45.455 0.00 0.00 0.00 3.51
134 135 3.737559 AGTGCATATTTCAACCCCAGA 57.262 42.857 0.00 0.00 0.00 3.86
135 136 4.019174 AGAAGTGCATATTTCAACCCCAG 58.981 43.478 10.07 0.00 0.00 4.45
136 137 4.016444 GAGAAGTGCATATTTCAACCCCA 58.984 43.478 10.07 0.00 0.00 4.96
137 138 4.273318 AGAGAAGTGCATATTTCAACCCC 58.727 43.478 10.07 0.00 0.00 4.95
138 139 4.034510 CGAGAGAAGTGCATATTTCAACCC 59.965 45.833 10.07 0.00 0.00 4.11
139 140 4.494855 GCGAGAGAAGTGCATATTTCAACC 60.495 45.833 10.07 1.69 0.00 3.77
140 141 4.331168 AGCGAGAGAAGTGCATATTTCAAC 59.669 41.667 10.07 5.19 0.00 3.18
141 142 4.507710 AGCGAGAGAAGTGCATATTTCAA 58.492 39.130 10.07 0.00 0.00 2.69
142 143 4.128925 AGCGAGAGAAGTGCATATTTCA 57.871 40.909 10.07 0.00 0.00 2.69
143 144 5.476752 AAAGCGAGAGAAGTGCATATTTC 57.523 39.130 0.00 0.00 0.00 2.17
144 145 8.662781 TTATAAAGCGAGAGAAGTGCATATTT 57.337 30.769 0.00 0.00 0.00 1.40
145 146 8.715998 CATTATAAAGCGAGAGAAGTGCATATT 58.284 33.333 0.00 0.00 0.00 1.28
146 147 8.090831 TCATTATAAAGCGAGAGAAGTGCATAT 58.909 33.333 0.00 0.00 0.00 1.78
147 148 7.433680 TCATTATAAAGCGAGAGAAGTGCATA 58.566 34.615 0.00 0.00 0.00 3.14
148 149 6.283694 TCATTATAAAGCGAGAGAAGTGCAT 58.716 36.000 0.00 0.00 0.00 3.96
149 150 5.660460 TCATTATAAAGCGAGAGAAGTGCA 58.340 37.500 0.00 0.00 0.00 4.57
150 151 6.347240 CCATCATTATAAAGCGAGAGAAGTGC 60.347 42.308 0.00 0.00 0.00 4.40
151 152 6.347240 GCCATCATTATAAAGCGAGAGAAGTG 60.347 42.308 0.00 0.00 0.00 3.16
152 153 5.698545 GCCATCATTATAAAGCGAGAGAAGT 59.301 40.000 0.00 0.00 0.00 3.01
153 154 5.698089 TGCCATCATTATAAAGCGAGAGAAG 59.302 40.000 0.00 0.00 0.00 2.85
154 155 5.610398 TGCCATCATTATAAAGCGAGAGAA 58.390 37.500 0.00 0.00 0.00 2.87
155 156 5.213891 TGCCATCATTATAAAGCGAGAGA 57.786 39.130 0.00 0.00 0.00 3.10
156 157 4.391216 CCTGCCATCATTATAAAGCGAGAG 59.609 45.833 0.00 0.00 0.00 3.20
157 158 4.040339 TCCTGCCATCATTATAAAGCGAGA 59.960 41.667 0.00 0.00 0.00 4.04
158 159 4.153117 GTCCTGCCATCATTATAAAGCGAG 59.847 45.833 0.00 0.00 0.00 5.03
159 160 4.065088 GTCCTGCCATCATTATAAAGCGA 58.935 43.478 0.00 0.00 0.00 4.93
160 161 3.120546 CGTCCTGCCATCATTATAAAGCG 60.121 47.826 0.00 0.00 0.00 4.68
161 162 4.065088 TCGTCCTGCCATCATTATAAAGC 58.935 43.478 0.00 0.00 0.00 3.51
162 163 4.150627 CGTCGTCCTGCCATCATTATAAAG 59.849 45.833 0.00 0.00 0.00 1.85
163 164 4.055360 CGTCGTCCTGCCATCATTATAAA 58.945 43.478 0.00 0.00 0.00 1.40
164 165 3.069016 ACGTCGTCCTGCCATCATTATAA 59.931 43.478 0.00 0.00 0.00 0.98
165 166 2.626266 ACGTCGTCCTGCCATCATTATA 59.374 45.455 0.00 0.00 0.00 0.98
166 167 1.412710 ACGTCGTCCTGCCATCATTAT 59.587 47.619 0.00 0.00 0.00 1.28
167 168 0.821517 ACGTCGTCCTGCCATCATTA 59.178 50.000 0.00 0.00 0.00 1.90
168 169 0.821517 TACGTCGTCCTGCCATCATT 59.178 50.000 0.00 0.00 0.00 2.57
169 170 0.385751 CTACGTCGTCCTGCCATCAT 59.614 55.000 0.00 0.00 0.00 2.45
170 171 1.807226 CTACGTCGTCCTGCCATCA 59.193 57.895 0.00 0.00 0.00 3.07
171 172 1.589196 GCTACGTCGTCCTGCCATC 60.589 63.158 0.00 0.00 0.00 3.51
172 173 1.884075 TTGCTACGTCGTCCTGCCAT 61.884 55.000 0.00 0.00 0.00 4.40
173 174 2.486636 CTTGCTACGTCGTCCTGCCA 62.487 60.000 0.00 0.00 0.00 4.92
174 175 1.805945 CTTGCTACGTCGTCCTGCC 60.806 63.158 0.00 0.00 0.00 4.85
175 176 0.388134 TTCTTGCTACGTCGTCCTGC 60.388 55.000 0.00 6.07 0.00 4.85
176 177 2.060326 TTTCTTGCTACGTCGTCCTG 57.940 50.000 0.00 0.00 0.00 3.86
177 178 2.806608 TTTTCTTGCTACGTCGTCCT 57.193 45.000 0.00 0.00 0.00 3.85
178 179 2.991190 TCATTTTCTTGCTACGTCGTCC 59.009 45.455 0.00 0.00 0.00 4.79
179 180 4.640805 TTCATTTTCTTGCTACGTCGTC 57.359 40.909 0.00 0.00 0.00 4.20
180 181 6.367969 AGTTATTCATTTTCTTGCTACGTCGT 59.632 34.615 2.21 2.21 0.00 4.34
181 182 6.762108 AGTTATTCATTTTCTTGCTACGTCG 58.238 36.000 0.00 0.00 0.00 5.12
182 183 8.015658 ACAAGTTATTCATTTTCTTGCTACGTC 58.984 33.333 0.00 0.00 38.99 4.34
183 184 7.871853 ACAAGTTATTCATTTTCTTGCTACGT 58.128 30.769 0.00 0.00 38.99 3.57
184 185 8.015087 TGACAAGTTATTCATTTTCTTGCTACG 58.985 33.333 0.00 0.00 38.99 3.51
185 186 9.846248 ATGACAAGTTATTCATTTTCTTGCTAC 57.154 29.630 0.00 0.00 38.99 3.58
195 196 9.621629 TCCCGTTATAATGACAAGTTATTCATT 57.378 29.630 6.24 13.64 43.38 2.57
196 197 9.793259 ATCCCGTTATAATGACAAGTTATTCAT 57.207 29.630 6.24 0.00 33.74 2.57
197 198 9.621629 AATCCCGTTATAATGACAAGTTATTCA 57.378 29.630 6.24 0.00 0.00 2.57
200 201 9.621629 TCAAATCCCGTTATAATGACAAGTTAT 57.378 29.630 6.24 0.00 0.00 1.89
201 202 8.885722 GTCAAATCCCGTTATAATGACAAGTTA 58.114 33.333 6.24 0.00 36.58 2.24
202 203 7.610305 AGTCAAATCCCGTTATAATGACAAGTT 59.390 33.333 13.02 0.59 38.46 2.66
203 204 7.110155 AGTCAAATCCCGTTATAATGACAAGT 58.890 34.615 13.02 0.00 38.46 3.16
204 205 7.553881 AGTCAAATCCCGTTATAATGACAAG 57.446 36.000 13.02 0.00 38.46 3.16
205 206 9.621629 ATTAGTCAAATCCCGTTATAATGACAA 57.378 29.630 13.02 7.59 38.46 3.18
206 207 9.621629 AATTAGTCAAATCCCGTTATAATGACA 57.378 29.630 13.02 0.00 38.46 3.58
211 212 8.895737 GGTGAAATTAGTCAAATCCCGTTATAA 58.104 33.333 0.00 0.00 0.00 0.98
212 213 8.047911 TGGTGAAATTAGTCAAATCCCGTTATA 58.952 33.333 0.00 0.00 0.00 0.98
213 214 6.887545 TGGTGAAATTAGTCAAATCCCGTTAT 59.112 34.615 0.00 0.00 0.00 1.89
214 215 6.239396 TGGTGAAATTAGTCAAATCCCGTTA 58.761 36.000 0.00 0.00 0.00 3.18
215 216 5.074115 TGGTGAAATTAGTCAAATCCCGTT 58.926 37.500 0.00 0.00 0.00 4.44
216 217 4.658063 TGGTGAAATTAGTCAAATCCCGT 58.342 39.130 0.00 0.00 0.00 5.28
217 218 4.096382 CCTGGTGAAATTAGTCAAATCCCG 59.904 45.833 0.00 0.00 0.00 5.14
218 219 5.016831 ACCTGGTGAAATTAGTCAAATCCC 58.983 41.667 0.00 0.00 0.00 3.85
219 220 6.208599 TGAACCTGGTGAAATTAGTCAAATCC 59.791 38.462 0.00 0.00 0.00 3.01
220 221 7.214467 TGAACCTGGTGAAATTAGTCAAATC 57.786 36.000 0.00 0.00 0.00 2.17
221 222 7.671398 AGATGAACCTGGTGAAATTAGTCAAAT 59.329 33.333 0.00 0.00 0.00 2.32
222 223 7.004086 AGATGAACCTGGTGAAATTAGTCAAA 58.996 34.615 0.00 0.00 0.00 2.69
223 224 6.430925 CAGATGAACCTGGTGAAATTAGTCAA 59.569 38.462 0.00 0.00 0.00 3.18
224 225 5.939883 CAGATGAACCTGGTGAAATTAGTCA 59.060 40.000 0.00 0.00 0.00 3.41
225 226 6.092807 GTCAGATGAACCTGGTGAAATTAGTC 59.907 42.308 0.00 0.00 34.99 2.59
226 227 5.940470 GTCAGATGAACCTGGTGAAATTAGT 59.060 40.000 0.00 0.00 34.99 2.24
227 228 6.093219 CAGTCAGATGAACCTGGTGAAATTAG 59.907 42.308 0.00 0.00 34.99 1.73
228 229 5.939883 CAGTCAGATGAACCTGGTGAAATTA 59.060 40.000 0.00 0.00 34.99 1.40
229 230 4.763793 CAGTCAGATGAACCTGGTGAAATT 59.236 41.667 0.00 0.00 34.99 1.82
230 231 4.330250 CAGTCAGATGAACCTGGTGAAAT 58.670 43.478 0.00 0.00 34.99 2.17
231 232 3.743521 CAGTCAGATGAACCTGGTGAAA 58.256 45.455 0.00 0.00 34.99 2.69
232 233 2.550855 GCAGTCAGATGAACCTGGTGAA 60.551 50.000 0.00 0.00 34.99 3.18
233 234 1.002430 GCAGTCAGATGAACCTGGTGA 59.998 52.381 0.00 0.00 34.99 4.02
234 235 1.446907 GCAGTCAGATGAACCTGGTG 58.553 55.000 0.00 0.00 34.99 4.17
235 236 0.326264 GGCAGTCAGATGAACCTGGT 59.674 55.000 0.00 0.00 34.99 4.00
236 237 0.742281 CGGCAGTCAGATGAACCTGG 60.742 60.000 0.00 0.00 34.99 4.45
237 238 0.036952 ACGGCAGTCAGATGAACCTG 60.037 55.000 0.00 0.00 35.55 4.00
238 239 0.687354 AACGGCAGTCAGATGAACCT 59.313 50.000 0.00 0.00 0.00 3.50
239 240 0.798776 CAACGGCAGTCAGATGAACC 59.201 55.000 0.00 0.00 0.00 3.62
240 241 1.461127 GACAACGGCAGTCAGATGAAC 59.539 52.381 0.00 0.00 36.06 3.18
241 242 1.608025 GGACAACGGCAGTCAGATGAA 60.608 52.381 0.00 0.00 37.74 2.57
242 243 0.037326 GGACAACGGCAGTCAGATGA 60.037 55.000 0.00 0.00 37.74 2.92
243 244 0.036952 AGGACAACGGCAGTCAGATG 60.037 55.000 0.00 0.00 37.74 2.90
244 245 0.036952 CAGGACAACGGCAGTCAGAT 60.037 55.000 0.00 0.00 37.74 2.90
245 246 1.367471 CAGGACAACGGCAGTCAGA 59.633 57.895 0.00 0.00 37.74 3.27
246 247 2.320587 GCAGGACAACGGCAGTCAG 61.321 63.158 0.00 0.00 40.25 3.51
247 248 2.280797 GCAGGACAACGGCAGTCA 60.281 61.111 0.00 0.00 40.25 3.41
248 249 2.280797 TGCAGGACAACGGCAGTC 60.281 61.111 0.00 0.00 45.40 3.51
252 253 3.414700 CGACTGCAGGACAACGGC 61.415 66.667 19.93 0.00 40.96 5.68
253 254 2.738521 CCGACTGCAGGACAACGG 60.739 66.667 19.93 18.81 40.25 4.44
254 255 2.022129 GACCGACTGCAGGACAACG 61.022 63.158 19.93 14.24 0.00 4.10
255 256 2.022129 CGACCGACTGCAGGACAAC 61.022 63.158 19.93 5.59 0.00 3.32
256 257 2.338620 CGACCGACTGCAGGACAA 59.661 61.111 19.93 0.00 0.00 3.18
257 258 3.680786 CCGACCGACTGCAGGACA 61.681 66.667 19.93 0.00 0.00 4.02
258 259 2.711922 ATCCGACCGACTGCAGGAC 61.712 63.158 19.93 10.76 33.37 3.85
259 260 2.362503 ATCCGACCGACTGCAGGA 60.363 61.111 19.93 4.68 35.24 3.86
260 261 2.202797 CATCCGACCGACTGCAGG 60.203 66.667 19.93 3.37 0.00 4.85
261 262 1.807165 CACATCCGACCGACTGCAG 60.807 63.158 13.48 13.48 0.00 4.41
262 263 2.094757 AACACATCCGACCGACTGCA 62.095 55.000 0.00 0.00 0.00 4.41
263 264 0.949105 AAACACATCCGACCGACTGC 60.949 55.000 0.00 0.00 0.00 4.40
264 265 1.194547 CAAAACACATCCGACCGACTG 59.805 52.381 0.00 0.00 0.00 3.51
265 266 1.069513 TCAAAACACATCCGACCGACT 59.930 47.619 0.00 0.00 0.00 4.18
266 267 1.504359 TCAAAACACATCCGACCGAC 58.496 50.000 0.00 0.00 0.00 4.79
267 268 1.868498 GTTCAAAACACATCCGACCGA 59.132 47.619 0.00 0.00 0.00 4.69
268 269 1.600013 TGTTCAAAACACATCCGACCG 59.400 47.619 0.00 0.00 36.25 4.79
269 270 3.915437 ATGTTCAAAACACATCCGACC 57.085 42.857 0.00 0.00 45.50 4.79
270 271 4.606961 ACAATGTTCAAAACACATCCGAC 58.393 39.130 0.00 0.00 45.50 4.79
271 272 4.909696 ACAATGTTCAAAACACATCCGA 57.090 36.364 0.00 0.00 45.50 4.55
272 273 5.757886 AGTACAATGTTCAAAACACATCCG 58.242 37.500 0.00 0.00 45.50 4.18
273 274 7.692291 CGATAGTACAATGTTCAAAACACATCC 59.308 37.037 0.00 0.00 45.50 3.51
274 275 7.692291 CCGATAGTACAATGTTCAAAACACATC 59.308 37.037 0.00 0.00 45.50 3.06
275 276 7.389330 TCCGATAGTACAATGTTCAAAACACAT 59.611 33.333 0.00 0.00 45.50 3.21
276 277 6.706716 TCCGATAGTACAATGTTCAAAACACA 59.293 34.615 0.00 0.00 45.50 3.72
277 278 7.124347 TCCGATAGTACAATGTTCAAAACAC 57.876 36.000 0.00 0.00 45.50 3.32
278 279 7.731882 TTCCGATAGTACAATGTTCAAAACA 57.268 32.000 0.00 0.00 46.94 2.83
283 284 9.051679 CCAAATATTCCGATAGTACAATGTTCA 57.948 33.333 0.00 0.00 0.00 3.18
284 285 9.268268 TCCAAATATTCCGATAGTACAATGTTC 57.732 33.333 0.00 0.00 0.00 3.18
285 286 9.621629 TTCCAAATATTCCGATAGTACAATGTT 57.378 29.630 0.00 0.00 0.00 2.71
286 287 9.621629 TTTCCAAATATTCCGATAGTACAATGT 57.378 29.630 0.00 0.00 0.00 2.71
311 312 9.974980 TTTAAAGAAGGATTTGCGAGTATTTTT 57.025 25.926 0.00 0.00 0.00 1.94
312 313 9.974980 TTTTAAAGAAGGATTTGCGAGTATTTT 57.025 25.926 0.00 0.00 0.00 1.82
313 314 9.974980 TTTTTAAAGAAGGATTTGCGAGTATTT 57.025 25.926 0.00 0.00 0.00 1.40
358 359 1.564348 TGGGGCAGGAATTACTCTTCC 59.436 52.381 0.00 0.00 44.29 3.46
359 360 3.366052 TTGGGGCAGGAATTACTCTTC 57.634 47.619 0.00 0.00 0.00 2.87
360 361 3.825908 TTTGGGGCAGGAATTACTCTT 57.174 42.857 0.00 0.00 0.00 2.85
361 362 4.337264 AATTTGGGGCAGGAATTACTCT 57.663 40.909 0.00 0.00 0.00 3.24
362 363 5.420725 AAAATTTGGGGCAGGAATTACTC 57.579 39.130 0.00 0.00 0.00 2.59
363 364 5.841267 AAAAATTTGGGGCAGGAATTACT 57.159 34.783 0.00 0.00 0.00 2.24
386 387 8.680707 GCAAATCTTTTGCCTTGTTTTAAAAA 57.319 26.923 12.74 0.00 39.38 1.94
399 400 5.181622 TCAATGGAAATGGCAAATCTTTTGC 59.818 36.000 14.88 14.88 44.22 3.68
400 401 6.804770 TCAATGGAAATGGCAAATCTTTTG 57.195 33.333 0.00 2.24 0.00 2.44
401 402 9.517868 TTAATCAATGGAAATGGCAAATCTTTT 57.482 25.926 0.00 0.00 0.00 2.27
402 403 9.169592 CTTAATCAATGGAAATGGCAAATCTTT 57.830 29.630 0.00 0.00 0.00 2.52
403 404 8.542080 TCTTAATCAATGGAAATGGCAAATCTT 58.458 29.630 0.00 0.00 0.00 2.40
404 405 8.081517 TCTTAATCAATGGAAATGGCAAATCT 57.918 30.769 0.00 0.00 0.00 2.40
405 406 8.721019 TTCTTAATCAATGGAAATGGCAAATC 57.279 30.769 0.00 0.00 0.00 2.17
406 407 8.542080 TCTTCTTAATCAATGGAAATGGCAAAT 58.458 29.630 0.00 0.00 0.00 2.32
407 408 7.905265 TCTTCTTAATCAATGGAAATGGCAAA 58.095 30.769 0.00 0.00 0.00 3.68
408 409 7.479352 TCTTCTTAATCAATGGAAATGGCAA 57.521 32.000 0.00 0.00 0.00 4.52
409 410 7.396907 TCTTCTTCTTAATCAATGGAAATGGCA 59.603 33.333 0.00 0.00 0.00 4.92
410 411 7.775120 TCTTCTTCTTAATCAATGGAAATGGC 58.225 34.615 0.00 0.00 0.00 4.40
411 412 9.182214 TCTCTTCTTCTTAATCAATGGAAATGG 57.818 33.333 0.00 0.00 0.00 3.16
420 421 9.160496 GCTGAGAAATCTCTTCTTCTTAATCAA 57.840 33.333 11.45 0.00 43.25 2.57
421 422 8.316946 TGCTGAGAAATCTCTTCTTCTTAATCA 58.683 33.333 11.45 0.00 43.25 2.57
422 423 8.715191 TGCTGAGAAATCTCTTCTTCTTAATC 57.285 34.615 11.45 0.00 43.25 1.75
423 424 9.683870 ATTGCTGAGAAATCTCTTCTTCTTAAT 57.316 29.630 11.45 0.39 43.25 1.40
424 425 9.160496 GATTGCTGAGAAATCTCTTCTTCTTAA 57.840 33.333 5.90 0.00 43.25 1.85
425 426 7.768120 GGATTGCTGAGAAATCTCTTCTTCTTA 59.232 37.037 12.70 0.00 43.25 2.10
426 427 6.598850 GGATTGCTGAGAAATCTCTTCTTCTT 59.401 38.462 12.70 0.00 43.25 2.52
427 428 6.114767 GGATTGCTGAGAAATCTCTTCTTCT 58.885 40.000 12.70 0.00 43.25 2.85
428 429 5.296531 GGGATTGCTGAGAAATCTCTTCTTC 59.703 44.000 12.70 0.00 43.25 2.87
429 430 5.044993 AGGGATTGCTGAGAAATCTCTTCTT 60.045 40.000 9.86 0.00 41.15 2.52
430 431 4.474287 AGGGATTGCTGAGAAATCTCTTCT 59.526 41.667 9.86 2.21 41.15 2.85
431 432 4.575645 CAGGGATTGCTGAGAAATCTCTTC 59.424 45.833 13.00 0.00 41.15 2.87
432 433 4.226846 TCAGGGATTGCTGAGAAATCTCTT 59.773 41.667 13.00 0.00 41.15 2.85
433 434 3.779183 TCAGGGATTGCTGAGAAATCTCT 59.221 43.478 9.86 9.86 44.07 3.10
434 435 3.876320 GTCAGGGATTGCTGAGAAATCTC 59.124 47.826 12.70 9.04 43.15 2.75
435 436 3.371380 GGTCAGGGATTGCTGAGAAATCT 60.371 47.826 12.70 0.00 34.95 2.40
436 437 2.948315 GGTCAGGGATTGCTGAGAAATC 59.052 50.000 4.50 4.50 34.00 2.17
437 438 2.357569 GGGTCAGGGATTGCTGAGAAAT 60.358 50.000 0.00 0.00 0.00 2.17
438 439 1.004745 GGGTCAGGGATTGCTGAGAAA 59.995 52.381 0.00 0.00 0.00 2.52
439 440 0.620556 GGGTCAGGGATTGCTGAGAA 59.379 55.000 0.00 0.00 0.00 2.87
440 441 1.617018 CGGGTCAGGGATTGCTGAGA 61.617 60.000 0.00 0.00 0.00 3.27
441 442 1.153289 CGGGTCAGGGATTGCTGAG 60.153 63.158 0.00 0.00 0.00 3.35
442 443 0.982852 ATCGGGTCAGGGATTGCTGA 60.983 55.000 0.00 0.00 0.00 4.26
443 444 0.816825 CATCGGGTCAGGGATTGCTG 60.817 60.000 0.00 0.00 0.00 4.41
444 445 1.274703 ACATCGGGTCAGGGATTGCT 61.275 55.000 0.00 0.00 0.00 3.91
445 446 0.394352 AACATCGGGTCAGGGATTGC 60.394 55.000 0.00 0.00 0.00 3.56
446 447 1.065491 TCAACATCGGGTCAGGGATTG 60.065 52.381 0.00 0.00 0.00 2.67
447 448 1.285280 TCAACATCGGGTCAGGGATT 58.715 50.000 0.00 0.00 0.00 3.01
448 449 1.511613 ATCAACATCGGGTCAGGGAT 58.488 50.000 0.00 0.00 0.00 3.85
449 450 2.039418 CTATCAACATCGGGTCAGGGA 58.961 52.381 0.00 0.00 0.00 4.20
450 451 2.039418 TCTATCAACATCGGGTCAGGG 58.961 52.381 0.00 0.00 0.00 4.45
451 452 3.384789 TCTTCTATCAACATCGGGTCAGG 59.615 47.826 0.00 0.00 0.00 3.86
452 453 4.655762 TCTTCTATCAACATCGGGTCAG 57.344 45.455 0.00 0.00 0.00 3.51
453 454 5.614324 AATCTTCTATCAACATCGGGTCA 57.386 39.130 0.00 0.00 0.00 4.02
454 455 6.982852 TCTAATCTTCTATCAACATCGGGTC 58.017 40.000 0.00 0.00 0.00 4.46
455 456 6.978674 TCTAATCTTCTATCAACATCGGGT 57.021 37.500 0.00 0.00 0.00 5.28
456 457 7.661968 TCTTCTAATCTTCTATCAACATCGGG 58.338 38.462 0.00 0.00 0.00 5.14
457 458 8.356657 ACTCTTCTAATCTTCTATCAACATCGG 58.643 37.037 0.00 0.00 0.00 4.18
480 481 7.716998 TGATTGATAAAAGGGCAGAGATTACTC 59.283 37.037 0.00 0.00 42.90 2.59
481 482 7.577303 TGATTGATAAAAGGGCAGAGATTACT 58.423 34.615 0.00 0.00 0.00 2.24
482 483 7.807977 TGATTGATAAAAGGGCAGAGATTAC 57.192 36.000 0.00 0.00 0.00 1.89
483 484 9.071276 GATTGATTGATAAAAGGGCAGAGATTA 57.929 33.333 0.00 0.00 0.00 1.75
484 485 7.562454 TGATTGATTGATAAAAGGGCAGAGATT 59.438 33.333 0.00 0.00 0.00 2.40
485 486 7.064866 TGATTGATTGATAAAAGGGCAGAGAT 58.935 34.615 0.00 0.00 0.00 2.75
486 487 6.425735 TGATTGATTGATAAAAGGGCAGAGA 58.574 36.000 0.00 0.00 0.00 3.10
487 488 6.704289 TGATTGATTGATAAAAGGGCAGAG 57.296 37.500 0.00 0.00 0.00 3.35
488 489 6.834969 TGATGATTGATTGATAAAAGGGCAGA 59.165 34.615 0.00 0.00 0.00 4.26
489 490 7.046292 TGATGATTGATTGATAAAAGGGCAG 57.954 36.000 0.00 0.00 0.00 4.85
490 491 7.421087 TTGATGATTGATTGATAAAAGGGCA 57.579 32.000 0.00 0.00 0.00 5.36
491 492 8.145767 TGATTGATGATTGATTGATAAAAGGGC 58.854 33.333 0.00 0.00 0.00 5.19
529 531 4.721132 TCCGACTCACAAAATACCCTTTT 58.279 39.130 0.00 0.00 0.00 2.27
530 532 4.324267 CTCCGACTCACAAAATACCCTTT 58.676 43.478 0.00 0.00 0.00 3.11
531 533 3.868754 GCTCCGACTCACAAAATACCCTT 60.869 47.826 0.00 0.00 0.00 3.95
533 535 2.007608 GCTCCGACTCACAAAATACCC 58.992 52.381 0.00 0.00 0.00 3.69
535 537 2.092211 CGTGCTCCGACTCACAAAATAC 59.908 50.000 0.00 0.00 39.56 1.89
536 538 2.029739 TCGTGCTCCGACTCACAAAATA 60.030 45.455 0.00 0.00 41.60 1.40
537 539 1.148310 CGTGCTCCGACTCACAAAAT 58.852 50.000 0.00 0.00 39.56 1.82
538 540 0.103390 TCGTGCTCCGACTCACAAAA 59.897 50.000 0.00 0.00 41.60 2.44
591 594 2.036475 GCGCTTCCTCCAATCTCTATCA 59.964 50.000 0.00 0.00 0.00 2.15
596 599 2.529619 GCGCGCTTCCTCCAATCTC 61.530 63.158 26.67 0.00 0.00 2.75
598 601 1.648467 AAAGCGCGCTTCCTCCAATC 61.648 55.000 42.82 5.21 34.84 2.67
600 603 1.004320 TAAAGCGCGCTTCCTCCAA 60.004 52.632 42.82 22.33 34.84 3.53
695 698 3.384532 GTTCGACTGCCGGGGGTA 61.385 66.667 2.18 0.00 39.14 3.69
702 705 2.453379 TTTACCCCCGTTCGACTGCC 62.453 60.000 0.00 0.00 0.00 4.85
703 706 1.004679 TTTACCCCCGTTCGACTGC 60.005 57.895 0.00 0.00 0.00 4.40
711 714 3.581265 TCTGTTTTTCTTTACCCCCGT 57.419 42.857 0.00 0.00 0.00 5.28
869 885 3.000819 CTACCGTGGGTGGCTGGA 61.001 66.667 0.00 0.00 36.19 3.86
878 897 4.217159 GGCTACCCGCTACCGTGG 62.217 72.222 0.00 0.00 40.59 4.94
879 898 4.217159 GGGCTACCCGCTACCGTG 62.217 72.222 0.00 0.00 39.13 4.94
1071 1098 1.292223 CAGGAAGGAAGCGACGGAA 59.708 57.895 0.00 0.00 0.00 4.30
1072 1099 2.970639 CAGGAAGGAAGCGACGGA 59.029 61.111 0.00 0.00 0.00 4.69
1073 1100 2.815647 GCAGGAAGGAAGCGACGG 60.816 66.667 0.00 0.00 0.00 4.79
1117 1156 3.206211 GATCGGCGAGCAGAGGGAG 62.206 68.421 21.51 0.00 0.00 4.30
1118 1157 3.219928 GATCGGCGAGCAGAGGGA 61.220 66.667 21.51 0.00 0.00 4.20
1119 1158 4.637489 CGATCGGCGAGCAGAGGG 62.637 72.222 25.62 4.15 44.57 4.30
1120 1159 3.586961 TCGATCGGCGAGCAGAGG 61.587 66.667 25.62 8.72 45.59 3.69
1132 1171 4.982795 TCCATCGCGCGCTCGATC 62.983 66.667 30.40 0.00 46.22 3.69
1468 1539 3.591254 GAAACAGGACGCGGCCTCT 62.591 63.158 35.89 19.88 35.66 3.69
1559 1634 1.740296 CGGGTAGAACCAACCAGCG 60.740 63.158 0.00 0.00 41.02 5.18
1563 1638 2.235402 TCATCTTCGGGTAGAACCAACC 59.765 50.000 0.00 0.00 41.02 3.77
1574 1649 2.644555 ATTCCGGCGTCATCTTCGGG 62.645 60.000 6.01 0.00 42.44 5.14
1622 1697 1.019278 TGCATTTCTTCGAGTCCGGC 61.019 55.000 0.00 0.00 36.24 6.13
1625 1700 5.460646 TCAATTTTGCATTTCTTCGAGTCC 58.539 37.500 0.00 0.00 0.00 3.85
1652 1727 1.298014 CTTGGGCCTCACAGTCTCC 59.702 63.158 4.53 0.00 0.00 3.71
1658 1733 2.449518 TCCACCTTGGGCCTCACA 60.450 61.111 4.53 0.00 38.32 3.58
1823 1904 3.537206 AAGGCTGTGGCTGTCGGTC 62.537 63.158 0.00 0.00 38.81 4.79
1874 1955 1.126846 CAGGCAAGTAAAAGAGACGCG 59.873 52.381 3.53 3.53 0.00 6.01
1875 1956 2.413837 TCAGGCAAGTAAAAGAGACGC 58.586 47.619 0.00 0.00 0.00 5.19
1958 2043 4.022603 TGAGGGTGATCTTCTCTCTTCTG 58.977 47.826 15.54 0.00 0.00 3.02
2044 2129 5.070313 ACACAACAAAGCTATGTTCCCATTT 59.930 36.000 0.00 0.00 41.44 2.32
2045 2130 4.588528 ACACAACAAAGCTATGTTCCCATT 59.411 37.500 0.00 0.00 41.44 3.16
2046 2131 4.022068 CACACAACAAAGCTATGTTCCCAT 60.022 41.667 0.00 0.00 41.44 4.00
2057 2142 1.919918 GACACTTGCACACAACAAAGC 59.080 47.619 0.00 0.00 0.00 3.51
2059 2144 2.556189 AGTGACACTTGCACACAACAAA 59.444 40.909 1.07 0.00 38.70 2.83
2060 2145 2.158559 AGTGACACTTGCACACAACAA 58.841 42.857 1.07 0.00 38.70 2.83
2096 2182 9.362151 TGGGAATTTCTACAAATTAGACAAACT 57.638 29.630 0.00 0.00 41.47 2.66
2111 2197 4.671831 TCACCTGCAAATGGGAATTTCTA 58.328 39.130 0.00 0.00 0.00 2.10
2127 2213 1.444895 GCGCTTTGCCAATCACCTG 60.445 57.895 0.00 0.00 37.76 4.00
2206 2292 0.384230 CGTGACCAATTGTGTGTCGC 60.384 55.000 13.65 13.65 34.63 5.19
2219 2305 3.930848 CAGACTATTTTGGTACCGTGACC 59.069 47.826 7.57 0.00 40.21 4.02
2239 2325 3.109619 GAGAATTCGCCGAGAGTTACAG 58.890 50.000 0.00 0.00 0.00 2.74
2244 2330 3.004944 GGATTAGAGAATTCGCCGAGAGT 59.995 47.826 5.49 0.00 0.00 3.24
2485 2574 1.815003 CCAGCACTCTCCAATGGAAAC 59.185 52.381 2.61 0.00 32.55 2.78
2610 2699 2.669777 AAAAGGGTACTGCGGTGCGT 62.670 55.000 8.92 0.00 0.00 5.24
2711 2830 5.167845 GCTGAGAAGAAGAGGTAAAGAGTG 58.832 45.833 0.00 0.00 0.00 3.51
2760 2881 2.036346 GTCCATATGGAGCCCATTTTGC 59.964 50.000 25.17 5.34 42.23 3.68
2772 2893 1.942657 CTTTGCTCGTGGTCCATATGG 59.057 52.381 16.25 16.25 0.00 2.74
2832 2953 8.715998 GCAATGATCCATTATAATCCGCTATAG 58.284 37.037 0.00 0.00 32.35 1.31
2882 3003 4.498009 CCACACAAAGCTGTTAGTCCAAAG 60.498 45.833 0.00 0.00 31.64 2.77
2883 3004 3.380004 CCACACAAAGCTGTTAGTCCAAA 59.620 43.478 0.00 0.00 31.64 3.28
2904 3025 1.000506 TGACCTGCGTAAGTCAGAACC 59.999 52.381 0.35 0.00 41.81 3.62
2905 3026 2.433868 TGACCTGCGTAAGTCAGAAC 57.566 50.000 0.35 0.00 41.81 3.01
3118 3246 6.150641 CGGGATTCTTTCTAGTATCCACGATA 59.849 42.308 11.37 0.00 45.41 2.92
3123 3251 3.323979 GCCGGGATTCTTTCTAGTATCCA 59.676 47.826 2.18 0.00 45.41 3.41
3127 3255 3.638860 TCAGCCGGGATTCTTTCTAGTA 58.361 45.455 2.18 0.00 0.00 1.82
3187 3317 9.529325 TGATTTACTACTTTTCGAGACCATATG 57.471 33.333 0.00 0.00 0.00 1.78
3190 3320 6.530534 CGTGATTTACTACTTTTCGAGACCAT 59.469 38.462 0.00 0.00 0.00 3.55
3251 3382 7.416890 CCGAGTTCTTACACATTAGGAGAGATT 60.417 40.741 0.00 0.00 0.00 2.40
3279 3410 5.065731 CGGTAGTAGTATCGTCCCAATATCC 59.934 48.000 1.88 0.00 0.00 2.59
3303 3434 7.059488 CACGACAAATGCAAAATAGAAGTACAC 59.941 37.037 0.00 0.00 0.00 2.90
3371 3503 7.118723 TCTTACATTAGTTTACGGAGGGAGTA 58.881 38.462 0.00 0.00 0.00 2.59
3372 3504 5.954150 TCTTACATTAGTTTACGGAGGGAGT 59.046 40.000 0.00 0.00 0.00 3.85
3373 3505 6.096564 ACTCTTACATTAGTTTACGGAGGGAG 59.903 42.308 0.00 0.00 0.00 4.30
3374 3506 5.954150 ACTCTTACATTAGTTTACGGAGGGA 59.046 40.000 0.00 0.00 0.00 4.20
3375 3507 6.040878 CACTCTTACATTAGTTTACGGAGGG 58.959 44.000 0.00 0.00 0.00 4.30
3376 3508 6.628185 ACACTCTTACATTAGTTTACGGAGG 58.372 40.000 0.00 0.00 0.00 4.30
3377 3509 8.530269 AAACACTCTTACATTAGTTTACGGAG 57.470 34.615 0.00 0.00 0.00 4.63
3378 3510 9.630098 CTAAACACTCTTACATTAGTTTACGGA 57.370 33.333 0.00 0.00 32.23 4.69
3379 3511 9.630098 TCTAAACACTCTTACATTAGTTTACGG 57.370 33.333 0.00 0.00 32.23 4.02
3424 3556 9.530633 CCTCTGTAAACTAATATAAGAGCGTTT 57.469 33.333 0.00 0.00 0.00 3.60
3425 3557 8.142551 CCCTCTGTAAACTAATATAAGAGCGTT 58.857 37.037 0.00 0.00 0.00 4.84
3426 3558 7.504911 TCCCTCTGTAAACTAATATAAGAGCGT 59.495 37.037 0.00 0.00 0.00 5.07
3427 3559 7.883217 TCCCTCTGTAAACTAATATAAGAGCG 58.117 38.462 0.00 0.00 0.00 5.03
3428 3560 8.862085 ACTCCCTCTGTAAACTAATATAAGAGC 58.138 37.037 0.00 0.00 0.00 4.09
3432 3564 9.940974 TGGTACTCCCTCTGTAAACTAATATAA 57.059 33.333 0.00 0.00 0.00 0.98
3433 3565 9.940974 TTGGTACTCCCTCTGTAAACTAATATA 57.059 33.333 0.00 0.00 0.00 0.86
3434 3566 8.849543 TTGGTACTCCCTCTGTAAACTAATAT 57.150 34.615 0.00 0.00 0.00 1.28
3435 3567 7.897565 ACTTGGTACTCCCTCTGTAAACTAATA 59.102 37.037 0.00 0.00 0.00 0.98
3436 3568 6.729569 ACTTGGTACTCCCTCTGTAAACTAAT 59.270 38.462 0.00 0.00 0.00 1.73
3437 3569 6.080009 ACTTGGTACTCCCTCTGTAAACTAA 58.920 40.000 0.00 0.00 0.00 2.24
3438 3570 5.648247 ACTTGGTACTCCCTCTGTAAACTA 58.352 41.667 0.00 0.00 0.00 2.24
3439 3571 4.490706 ACTTGGTACTCCCTCTGTAAACT 58.509 43.478 0.00 0.00 0.00 2.66
3440 3572 4.886496 ACTTGGTACTCCCTCTGTAAAC 57.114 45.455 0.00 0.00 0.00 2.01
3441 3573 4.774200 GGTACTTGGTACTCCCTCTGTAAA 59.226 45.833 7.60 0.00 38.85 2.01
3442 3574 4.202706 TGGTACTTGGTACTCCCTCTGTAA 60.203 45.833 7.60 0.00 38.85 2.41
3443 3575 3.334581 TGGTACTTGGTACTCCCTCTGTA 59.665 47.826 7.60 0.00 38.85 2.74
3444 3576 2.111255 TGGTACTTGGTACTCCCTCTGT 59.889 50.000 7.60 0.00 38.85 3.41
3445 3577 2.816411 TGGTACTTGGTACTCCCTCTG 58.184 52.381 7.60 0.00 38.85 3.35
3446 3578 3.555117 TTGGTACTTGGTACTCCCTCT 57.445 47.619 7.60 0.00 38.85 3.69
3447 3579 3.681874 GCATTGGTACTTGGTACTCCCTC 60.682 52.174 7.60 0.00 38.85 4.30
3448 3580 2.238898 GCATTGGTACTTGGTACTCCCT 59.761 50.000 7.60 0.00 38.85 4.20
3449 3581 2.026636 TGCATTGGTACTTGGTACTCCC 60.027 50.000 7.60 0.00 38.85 4.30
3450 3582 3.343941 TGCATTGGTACTTGGTACTCC 57.656 47.619 7.60 0.00 38.85 3.85
3452 3584 9.890629 CATATATATGCATTGGTACTTGGTACT 57.109 33.333 3.54 0.00 38.85 2.73
3453 3585 9.667107 ACATATATATGCATTGGTACTTGGTAC 57.333 33.333 20.46 0.00 36.50 3.34
3455 3587 9.231297 GAACATATATATGCATTGGTACTTGGT 57.769 33.333 20.46 0.00 37.19 3.67
3456 3588 9.453572 AGAACATATATATGCATTGGTACTTGG 57.546 33.333 20.46 0.00 37.19 3.61
3675 3812 4.708177 TGTTGAAAGGAAAGGAGAGAGTG 58.292 43.478 0.00 0.00 0.00 3.51
3682 3819 7.505585 ACATCTTGTAATGTTGAAAGGAAAGGA 59.494 33.333 0.00 0.00 36.47 3.36
3683 3820 7.661040 ACATCTTGTAATGTTGAAAGGAAAGG 58.339 34.615 0.00 0.00 36.47 3.11
3684 3821 9.533253 AAACATCTTGTAATGTTGAAAGGAAAG 57.467 29.630 3.25 0.00 46.49 2.62
3685 3822 9.883142 AAAACATCTTGTAATGTTGAAAGGAAA 57.117 25.926 3.25 0.00 46.49 3.13
3719 3857 6.019479 GCGTCTGTATACTTCCAATTCAGAAG 60.019 42.308 11.53 11.53 45.12 2.85
3730 3872 3.483085 GCCAAAACGCGTCTGTATACTTC 60.483 47.826 14.44 0.00 0.00 3.01
3750 3892 0.531753 AATGGGCAAACAAACACGCC 60.532 50.000 0.00 0.00 44.10 5.68
3809 3952 2.806244 CACCCTCCGTTCACTGTTTTAG 59.194 50.000 0.00 0.00 0.00 1.85
3845 3988 1.002033 GTTCCAACAGCTGCAAGTCTG 60.002 52.381 15.27 8.28 41.67 3.51
3846 3989 1.312815 GTTCCAACAGCTGCAAGTCT 58.687 50.000 15.27 0.00 35.30 3.24
3886 4038 5.164620 TGCTGGTGATAGTGAAATGAGAA 57.835 39.130 0.00 0.00 0.00 2.87
3898 4050 2.507058 AGAAGGAATGCTGCTGGTGATA 59.493 45.455 0.00 0.00 0.00 2.15
3923 4097 2.498885 TGTGATGTGGAGTCCATCTCAG 59.501 50.000 16.67 0.00 44.40 3.35
3976 4157 5.130350 ACATGCAACAACTAGTGGTAACTT 58.870 37.500 2.53 0.00 37.88 2.66
4098 4283 9.601217 TTATTTTGAGAAAGCTGGATACTACTC 57.399 33.333 0.00 0.00 37.61 2.59
4128 4313 6.017357 CGGCCTGAGTAGAAACTAAAACTTTT 60.017 38.462 0.00 0.00 35.56 2.27
4129 4314 5.469084 CGGCCTGAGTAGAAACTAAAACTTT 59.531 40.000 0.00 0.00 35.56 2.66
4130 4315 4.995487 CGGCCTGAGTAGAAACTAAAACTT 59.005 41.667 0.00 0.00 35.56 2.66
4131 4316 4.040095 ACGGCCTGAGTAGAAACTAAAACT 59.960 41.667 0.00 0.00 35.56 2.66
4132 4317 4.151867 CACGGCCTGAGTAGAAACTAAAAC 59.848 45.833 0.00 0.00 35.56 2.43
4133 4318 4.202284 ACACGGCCTGAGTAGAAACTAAAA 60.202 41.667 0.00 0.00 35.56 1.52
4134 4319 3.322828 ACACGGCCTGAGTAGAAACTAAA 59.677 43.478 0.00 0.00 35.56 1.85
4135 4320 2.895404 ACACGGCCTGAGTAGAAACTAA 59.105 45.455 0.00 0.00 35.56 2.24
4136 4321 2.522185 ACACGGCCTGAGTAGAAACTA 58.478 47.619 0.00 0.00 35.56 2.24
4137 4322 1.339097 ACACGGCCTGAGTAGAAACT 58.661 50.000 0.00 0.00 39.21 2.66
4138 4323 2.165319 AACACGGCCTGAGTAGAAAC 57.835 50.000 0.00 0.00 0.00 2.78
4139 4324 2.367567 AGAAACACGGCCTGAGTAGAAA 59.632 45.455 0.00 0.00 0.00 2.52
4140 4325 1.968493 AGAAACACGGCCTGAGTAGAA 59.032 47.619 0.00 0.00 0.00 2.10
4141 4326 1.544691 GAGAAACACGGCCTGAGTAGA 59.455 52.381 0.00 0.00 0.00 2.59
4142 4327 1.546476 AGAGAAACACGGCCTGAGTAG 59.454 52.381 0.00 0.00 0.00 2.57
4143 4328 1.629043 AGAGAAACACGGCCTGAGTA 58.371 50.000 0.00 0.00 0.00 2.59
4144 4329 0.759346 AAGAGAAACACGGCCTGAGT 59.241 50.000 0.00 0.00 0.00 3.41
4145 4330 1.884235 AAAGAGAAACACGGCCTGAG 58.116 50.000 0.00 0.00 0.00 3.35
4146 4331 2.218603 GAAAAGAGAAACACGGCCTGA 58.781 47.619 0.00 0.00 0.00 3.86
4147 4332 1.069906 CGAAAAGAGAAACACGGCCTG 60.070 52.381 0.00 0.21 0.00 4.85
4148 4333 1.226746 CGAAAAGAGAAACACGGCCT 58.773 50.000 0.00 0.00 0.00 5.19
4149 4334 0.385598 GCGAAAAGAGAAACACGGCC 60.386 55.000 0.00 0.00 0.00 6.13
4150 4335 0.385598 GGCGAAAAGAGAAACACGGC 60.386 55.000 0.00 0.00 38.82 5.68
4151 4336 0.110823 CGGCGAAAAGAGAAACACGG 60.111 55.000 0.00 0.00 0.00 4.94
4152 4337 0.110823 CCGGCGAAAAGAGAAACACG 60.111 55.000 9.30 0.00 0.00 4.49
4153 4338 1.194772 CTCCGGCGAAAAGAGAAACAC 59.805 52.381 9.30 0.00 0.00 3.32
4154 4339 1.508632 CTCCGGCGAAAAGAGAAACA 58.491 50.000 9.30 0.00 0.00 2.83
4155 4340 0.166161 GCTCCGGCGAAAAGAGAAAC 59.834 55.000 9.30 0.00 0.00 2.78
4156 4341 0.250124 TGCTCCGGCGAAAAGAGAAA 60.250 50.000 9.30 0.00 42.25 2.52
4157 4342 0.949105 GTGCTCCGGCGAAAAGAGAA 60.949 55.000 9.30 0.00 42.25 2.87
4158 4343 1.374252 GTGCTCCGGCGAAAAGAGA 60.374 57.895 9.30 0.00 42.25 3.10
4159 4344 2.730672 CGTGCTCCGGCGAAAAGAG 61.731 63.158 9.30 7.58 42.25 2.85
4160 4345 2.736995 CGTGCTCCGGCGAAAAGA 60.737 61.111 9.30 0.00 42.25 2.52
4188 4373 2.027314 CGATGCAGAGGCCGAGAG 59.973 66.667 0.00 0.00 40.13 3.20
4189 4374 3.531207 CCGATGCAGAGGCCGAGA 61.531 66.667 0.00 0.00 40.13 4.04
4190 4375 2.967929 CTTCCGATGCAGAGGCCGAG 62.968 65.000 0.00 0.00 40.13 4.63
4191 4376 3.074369 TTCCGATGCAGAGGCCGA 61.074 61.111 0.00 0.00 40.13 5.54
4192 4377 2.374830 ATCTTCCGATGCAGAGGCCG 62.375 60.000 0.00 0.00 40.13 6.13
4193 4378 0.883814 CATCTTCCGATGCAGAGGCC 60.884 60.000 0.00 0.00 40.48 5.19
4194 4379 2.614581 CATCTTCCGATGCAGAGGC 58.385 57.895 5.43 0.00 40.48 4.70
4202 4387 0.036388 AACGGTGTGCATCTTCCGAT 60.036 50.000 21.71 11.78 44.86 4.18
4203 4388 0.604073 TAACGGTGTGCATCTTCCGA 59.396 50.000 21.71 4.68 44.86 4.55
4204 4389 1.434555 TTAACGGTGTGCATCTTCCG 58.565 50.000 16.11 16.11 46.98 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.