Multiple sequence alignment - TraesCS5D01G280300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G280300 chr5D 100.000 5764 0 0 1 5764 381822907 381817144 0.000000e+00 10645.0
1 TraesCS5D01G280300 chr5D 79.118 431 49 17 5219 5624 381812031 381811617 5.730000e-65 259.0
2 TraesCS5D01G280300 chr5D 86.928 153 20 0 4800 4952 381726112 381725960 7.680000e-39 172.0
3 TraesCS5D01G280300 chr5D 86.928 153 20 0 4800 4952 381812470 381812318 7.680000e-39 172.0
4 TraesCS5D01G280300 chr5D 93.902 82 5 0 4800 4881 381807133 381807052 2.180000e-24 124.0
5 TraesCS5D01G280300 chr5A 94.446 3097 114 23 1935 5000 481932572 481929503 0.000000e+00 4713.0
6 TraesCS5D01G280300 chr5A 92.342 1136 59 16 821 1934 481933739 481932610 0.000000e+00 1591.0
7 TraesCS5D01G280300 chr5A 95.853 651 15 6 5123 5764 481929505 481928858 0.000000e+00 1042.0
8 TraesCS5D01G280300 chr5A 94.964 139 6 1 4990 5127 68932943 68933081 3.500000e-52 217.0
9 TraesCS5D01G280300 chr5B 95.686 1924 74 6 3083 5000 457963261 457965181 0.000000e+00 3085.0
10 TraesCS5D01G280300 chr5B 92.589 1120 51 12 834 1935 457960718 457961823 0.000000e+00 1580.0
11 TraesCS5D01G280300 chr5B 90.432 1181 50 27 1935 3082 457962028 457963178 0.000000e+00 1496.0
12 TraesCS5D01G280300 chr5B 91.284 654 23 11 5123 5764 457965179 457965810 0.000000e+00 861.0
13 TraesCS5D01G280300 chr5B 92.517 147 10 1 4979 5125 482199771 482199626 5.850000e-50 209.0
14 TraesCS5D01G280300 chr5B 87.662 154 18 1 4800 4952 459560797 459560644 1.650000e-40 178.0
15 TraesCS5D01G280300 chr5B 85.161 155 21 1 4800 4952 457897130 457896976 2.150000e-34 158.0
16 TraesCS5D01G280300 chr5B 85.161 155 21 1 4800 4952 458041200 458041354 2.150000e-34 158.0
17 TraesCS5D01G280300 chr5B 82.192 73 12 1 755 827 75018377 75018448 1.730000e-05 62.1
18 TraesCS5D01G280300 chr5B 96.774 31 1 0 5122 5152 457975748 457975778 1.000000e-02 52.8
19 TraesCS5D01G280300 chr6B 97.692 130 3 0 4996 5125 207510898 207511027 2.090000e-54 224.0
20 TraesCS5D01G280300 chr6B 94.928 138 7 0 4996 5133 641402606 641402469 3.500000e-52 217.0
21 TraesCS5D01G280300 chr1A 97.692 130 3 0 4996 5125 486045902 486045773 2.090000e-54 224.0
22 TraesCS5D01G280300 chr1A 86.207 58 7 1 770 827 284320216 284320272 1.730000e-05 62.1
23 TraesCS5D01G280300 chr1A 81.944 72 13 0 3251 3322 435402863 435402792 1.730000e-05 62.1
24 TraesCS5D01G280300 chr7B 96.296 135 5 0 4996 5130 55863197 55863063 7.520000e-54 222.0
25 TraesCS5D01G280300 chr7B 82.031 128 8 10 331 453 652621755 652621638 1.710000e-15 95.3
26 TraesCS5D01G280300 chr7B 89.333 75 6 2 594 667 652621551 652621478 6.150000e-15 93.5
27 TraesCS5D01G280300 chr7B 93.750 48 2 1 287 333 652621871 652621824 2.880000e-08 71.3
28 TraesCS5D01G280300 chr2B 91.463 164 8 6 4999 5160 545760514 545760355 2.700000e-53 220.0
29 TraesCS5D01G280300 chr4D 95.588 136 6 0 4997 5132 58389380 58389245 9.720000e-53 219.0
30 TraesCS5D01G280300 chr3D 91.018 167 7 1 509 667 116109567 116109733 9.720000e-53 219.0
31 TraesCS5D01G280300 chr3D 95.122 41 2 0 291 331 116109274 116109314 1.340000e-06 65.8
32 TraesCS5D01G280300 chr7A 92.568 148 9 2 4998 5144 671502371 671502225 1.630000e-50 211.0
33 TraesCS5D01G280300 chr7A 84.706 170 14 5 509 667 80084052 80083884 5.980000e-35 159.0
34 TraesCS5D01G280300 chr7A 82.031 128 8 10 331 453 150980257 150980140 1.710000e-15 95.3
35 TraesCS5D01G280300 chr7A 89.333 75 6 2 594 667 150980053 150979980 6.150000e-15 93.5
36 TraesCS5D01G280300 chr7A 93.750 48 2 1 287 333 150980373 150980326 2.880000e-08 71.3
37 TraesCS5D01G280300 chr7D 98.824 85 1 0 583 667 102294844 102294928 1.000000e-32 152.0
38 TraesCS5D01G280300 chr7D 94.118 68 3 1 330 397 102294522 102294588 1.020000e-17 102.0
39 TraesCS5D01G280300 chr7D 100.000 38 0 0 453 490 102294803 102294840 2.880000e-08 71.3
40 TraesCS5D01G280300 chr2D 82.659 173 12 4 509 667 327839759 327839927 2.800000e-28 137.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G280300 chr5D 381817144 381822907 5763 True 10645.000000 10645 100.000000 1 5764 1 chr5D.!!$R3 5763
1 TraesCS5D01G280300 chr5D 381811617 381812470 853 True 215.500000 259 83.023000 4800 5624 2 chr5D.!!$R4 824
2 TraesCS5D01G280300 chr5A 481928858 481933739 4881 True 2448.666667 4713 94.213667 821 5764 3 chr5A.!!$R1 4943
3 TraesCS5D01G280300 chr5B 457960718 457965810 5092 False 1755.500000 3085 92.497750 834 5764 4 chr5B.!!$F4 4930

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
682 683 0.034477 AAAACGGGCCCATGTCCTAG 60.034 55.0 24.92 4.83 32.45 3.02 F
876 877 0.250338 AGCTTCCGTGTTTCCACTCC 60.250 55.0 0.00 0.00 39.55 3.85 F
1893 1927 0.251297 ACTGCCCTGCTGCACAAATA 60.251 50.0 0.00 0.00 36.04 1.40 F
3653 4055 0.613853 TGAGGGGGAACTCGATTCGT 60.614 55.0 5.89 0.00 40.39 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1594 1627 0.037419 TACACAAGAGCGCTGATGCA 60.037 50.0 18.48 0.0 39.64 3.96 R
2022 2299 0.179000 AGGAACTGCTGATAAGGGCG 59.821 55.0 0.00 0.0 37.18 6.13 R
3709 4111 0.737219 GCGCAGATTCATCAGGCTTT 59.263 50.0 0.30 0.0 0.00 3.51 R
5456 6041 0.034896 TCGGCAAAAGGGACACTCTC 59.965 55.0 0.00 0.0 0.00 3.20 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 0.679505 AAAAAGAAAAGGGAGGCGGC 59.320 50.000 0.00 0.00 0.00 6.53
29 30 0.469144 AAAAGAAAAGGGAGGCGGCA 60.469 50.000 13.08 0.00 0.00 5.69
30 31 0.895559 AAAGAAAAGGGAGGCGGCAG 60.896 55.000 13.08 0.00 0.00 4.85
31 32 1.779061 AAGAAAAGGGAGGCGGCAGA 61.779 55.000 13.08 0.00 0.00 4.26
32 33 2.034221 AAAAGGGAGGCGGCAGAC 59.966 61.111 13.08 1.66 0.00 3.51
33 34 2.748058 GAAAAGGGAGGCGGCAGACA 62.748 60.000 13.08 0.00 0.00 3.41
34 35 2.142292 AAAAGGGAGGCGGCAGACAT 62.142 55.000 13.08 0.00 0.00 3.06
35 36 2.826777 AAAGGGAGGCGGCAGACATG 62.827 60.000 13.08 0.00 0.00 3.21
36 37 3.785859 GGGAGGCGGCAGACATGA 61.786 66.667 13.08 0.00 0.00 3.07
37 38 2.512515 GGAGGCGGCAGACATGAC 60.513 66.667 13.08 0.00 0.00 3.06
38 39 2.512515 GAGGCGGCAGACATGACC 60.513 66.667 13.08 0.00 0.00 4.02
39 40 4.457496 AGGCGGCAGACATGACCG 62.457 66.667 13.08 8.27 44.10 4.79
42 43 4.758251 CGGCAGACATGACCGGCA 62.758 66.667 0.00 0.00 40.32 5.69
43 44 2.821366 GGCAGACATGACCGGCAG 60.821 66.667 0.00 0.00 0.00 4.85
44 45 2.046892 GCAGACATGACCGGCAGT 60.047 61.111 0.00 1.16 0.00 4.40
45 46 2.103042 GCAGACATGACCGGCAGTC 61.103 63.158 0.00 10.20 46.51 3.51
68 69 2.170985 CGAAGCTGTTGTTCGCCG 59.829 61.111 0.00 0.00 40.27 6.46
69 70 2.556287 GAAGCTGTTGTTCGCCGG 59.444 61.111 0.00 0.00 0.00 6.13
70 71 2.966309 GAAGCTGTTGTTCGCCGGG 61.966 63.158 2.18 0.00 0.00 5.73
86 87 2.677848 GGGGGAGAAAGTGGAGGC 59.322 66.667 0.00 0.00 0.00 4.70
87 88 2.269241 GGGGAGAAAGTGGAGGCG 59.731 66.667 0.00 0.00 0.00 5.52
88 89 2.436824 GGGAGAAAGTGGAGGCGC 60.437 66.667 0.00 0.00 0.00 6.53
89 90 2.347490 GGAGAAAGTGGAGGCGCA 59.653 61.111 10.83 0.00 0.00 6.09
90 91 1.743252 GGAGAAAGTGGAGGCGCAG 60.743 63.158 10.83 0.00 0.00 5.18
138 139 3.204827 CGGAGATGGCCGCAAAGG 61.205 66.667 0.00 0.00 45.38 3.11
139 140 2.830370 GGAGATGGCCGCAAAGGG 60.830 66.667 0.00 0.00 41.48 3.95
179 180 3.762247 CGTCGCCGGGGTAAGGAA 61.762 66.667 19.13 0.00 0.00 3.36
180 181 2.186125 GTCGCCGGGGTAAGGAAG 59.814 66.667 19.13 0.00 0.00 3.46
181 182 3.777910 TCGCCGGGGTAAGGAAGC 61.778 66.667 19.13 0.00 0.00 3.86
182 183 4.090588 CGCCGGGGTAAGGAAGCA 62.091 66.667 11.01 0.00 0.00 3.91
183 184 2.124695 GCCGGGGTAAGGAAGCAG 60.125 66.667 2.18 0.00 0.00 4.24
184 185 2.666098 GCCGGGGTAAGGAAGCAGA 61.666 63.158 2.18 0.00 0.00 4.26
185 186 1.522569 CCGGGGTAAGGAAGCAGAG 59.477 63.158 0.00 0.00 0.00 3.35
186 187 1.522569 CGGGGTAAGGAAGCAGAGG 59.477 63.158 0.00 0.00 0.00 3.69
187 188 1.224870 GGGGTAAGGAAGCAGAGGC 59.775 63.158 0.00 0.00 41.61 4.70
213 214 3.760035 GCGGGAGTTCCTGAGCGA 61.760 66.667 11.20 0.00 45.36 4.93
214 215 2.182030 CGGGAGTTCCTGAGCGAC 59.818 66.667 0.38 0.00 45.36 5.19
215 216 2.182030 GGGAGTTCCTGAGCGACG 59.818 66.667 0.00 0.00 35.95 5.12
216 217 2.507324 GGAGTTCCTGAGCGACGC 60.507 66.667 13.03 13.03 0.00 5.19
217 218 2.258591 GAGTTCCTGAGCGACGCA 59.741 61.111 23.70 0.28 0.00 5.24
218 219 1.803519 GAGTTCCTGAGCGACGCAG 60.804 63.158 23.70 11.49 0.00 5.18
269 270 4.364409 GGCACGGACGACAAACGC 62.364 66.667 0.00 0.00 46.94 4.84
270 271 4.364409 GCACGGACGACAAACGCC 62.364 66.667 0.00 0.00 46.94 5.68
271 272 2.962786 CACGGACGACAAACGCCA 60.963 61.111 0.00 0.00 46.94 5.69
272 273 2.660552 ACGGACGACAAACGCCAG 60.661 61.111 0.00 0.00 46.94 4.85
273 274 4.072088 CGGACGACAAACGCCAGC 62.072 66.667 0.00 0.00 46.94 4.85
274 275 4.072088 GGACGACAAACGCCAGCG 62.072 66.667 11.05 11.05 46.94 5.18
275 276 4.072088 GACGACAAACGCCAGCGG 62.072 66.667 17.33 0.92 46.94 5.52
276 277 4.903010 ACGACAAACGCCAGCGGT 62.903 61.111 17.33 6.93 46.94 5.68
277 278 4.368808 CGACAAACGCCAGCGGTG 62.369 66.667 17.33 15.49 40.27 4.94
338 339 3.816524 CGCGCGGGACTCTCTCTT 61.817 66.667 24.84 0.00 0.00 2.85
339 340 2.574399 GCGCGGGACTCTCTCTTT 59.426 61.111 8.83 0.00 0.00 2.52
340 341 1.807573 GCGCGGGACTCTCTCTTTG 60.808 63.158 8.83 0.00 0.00 2.77
341 342 1.587054 CGCGGGACTCTCTCTTTGT 59.413 57.895 0.00 0.00 0.00 2.83
342 343 0.734253 CGCGGGACTCTCTCTTTGTG 60.734 60.000 0.00 0.00 0.00 3.33
343 344 0.603569 GCGGGACTCTCTCTTTGTGA 59.396 55.000 0.00 0.00 0.00 3.58
344 345 1.403514 GCGGGACTCTCTCTTTGTGAG 60.404 57.143 0.00 0.00 43.96 3.51
345 346 1.403514 CGGGACTCTCTCTTTGTGAGC 60.404 57.143 0.00 0.00 42.38 4.26
346 347 1.403514 GGGACTCTCTCTTTGTGAGCG 60.404 57.143 0.00 0.00 42.38 5.03
347 348 1.271102 GGACTCTCTCTTTGTGAGCGT 59.729 52.381 0.00 0.00 42.38 5.07
348 349 2.323959 GACTCTCTCTTTGTGAGCGTG 58.676 52.381 0.00 0.00 42.38 5.34
349 350 1.683917 ACTCTCTCTTTGTGAGCGTGT 59.316 47.619 0.00 0.00 42.38 4.49
350 351 2.057316 CTCTCTCTTTGTGAGCGTGTG 58.943 52.381 0.00 0.00 42.38 3.82
351 352 1.409064 TCTCTCTTTGTGAGCGTGTGT 59.591 47.619 0.00 0.00 42.38 3.72
352 353 1.524355 CTCTCTTTGTGAGCGTGTGTG 59.476 52.381 0.00 0.00 42.38 3.82
353 354 0.583438 CTCTTTGTGAGCGTGTGTGG 59.417 55.000 0.00 0.00 35.84 4.17
354 355 1.009675 CTTTGTGAGCGTGTGTGGC 60.010 57.895 0.00 0.00 0.00 5.01
355 356 2.700334 CTTTGTGAGCGTGTGTGGCG 62.700 60.000 0.00 0.00 35.00 5.69
372 373 4.883354 GGCGCTGGGGATTGGGAG 62.883 72.222 7.64 0.00 0.00 4.30
373 374 4.883354 GCGCTGGGGATTGGGAGG 62.883 72.222 0.00 0.00 0.00 4.30
374 375 3.089874 CGCTGGGGATTGGGAGGA 61.090 66.667 0.00 0.00 0.00 3.71
375 376 2.455565 CGCTGGGGATTGGGAGGAT 61.456 63.158 0.00 0.00 0.00 3.24
376 377 1.127567 CGCTGGGGATTGGGAGGATA 61.128 60.000 0.00 0.00 0.00 2.59
377 378 1.376649 GCTGGGGATTGGGAGGATAT 58.623 55.000 0.00 0.00 0.00 1.63
378 379 2.562296 GCTGGGGATTGGGAGGATATA 58.438 52.381 0.00 0.00 0.00 0.86
379 380 2.507471 GCTGGGGATTGGGAGGATATAG 59.493 54.545 0.00 0.00 0.00 1.31
380 381 3.118531 CTGGGGATTGGGAGGATATAGG 58.881 54.545 0.00 0.00 0.00 2.57
381 382 2.738758 TGGGGATTGGGAGGATATAGGA 59.261 50.000 0.00 0.00 0.00 2.94
382 383 3.347208 TGGGGATTGGGAGGATATAGGAT 59.653 47.826 0.00 0.00 0.00 3.24
383 384 3.977326 GGGGATTGGGAGGATATAGGATC 59.023 52.174 0.00 0.00 0.00 3.36
384 385 3.643792 GGGATTGGGAGGATATAGGATCG 59.356 52.174 0.00 0.00 0.00 3.69
385 386 4.547671 GGATTGGGAGGATATAGGATCGA 58.452 47.826 0.00 0.00 0.00 3.59
386 387 4.586841 GGATTGGGAGGATATAGGATCGAG 59.413 50.000 0.00 0.00 0.00 4.04
387 388 3.671740 TGGGAGGATATAGGATCGAGG 57.328 52.381 0.00 0.00 0.00 4.63
388 389 2.245028 TGGGAGGATATAGGATCGAGGG 59.755 54.545 0.00 0.00 0.00 4.30
389 390 2.514582 GGGAGGATATAGGATCGAGGGA 59.485 54.545 0.00 0.00 0.00 4.20
390 391 3.141272 GGGAGGATATAGGATCGAGGGAT 59.859 52.174 0.00 0.00 34.96 3.85
391 392 4.403734 GGAGGATATAGGATCGAGGGATC 58.596 52.174 0.00 0.00 46.85 3.36
397 398 4.443934 GATCGAGGGATCGGGGAT 57.556 61.111 0.00 0.00 39.72 3.85
398 399 2.194460 GATCGAGGGATCGGGGATC 58.806 63.158 0.00 0.00 39.72 3.36
399 400 1.658686 GATCGAGGGATCGGGGATCG 61.659 65.000 0.00 0.00 39.72 3.69
400 401 3.374402 CGAGGGATCGGGGATCGG 61.374 72.222 0.00 0.00 39.72 4.18
401 402 2.117640 GAGGGATCGGGGATCGGA 59.882 66.667 0.00 0.00 39.72 4.55
402 403 1.533273 GAGGGATCGGGGATCGGAA 60.533 63.158 0.00 0.00 39.72 4.30
403 404 1.074775 AGGGATCGGGGATCGGAAA 60.075 57.895 0.00 0.00 39.72 3.13
404 405 0.473886 AGGGATCGGGGATCGGAAAT 60.474 55.000 0.00 0.00 39.72 2.17
405 406 1.203262 AGGGATCGGGGATCGGAAATA 60.203 52.381 0.00 0.00 39.72 1.40
406 407 1.207329 GGGATCGGGGATCGGAAATAG 59.793 57.143 0.00 0.00 39.72 1.73
407 408 1.207329 GGATCGGGGATCGGAAATAGG 59.793 57.143 0.00 0.00 39.72 2.57
408 409 1.207329 GATCGGGGATCGGAAATAGGG 59.793 57.143 0.00 0.00 39.77 3.53
409 410 0.105349 TCGGGGATCGGAAATAGGGT 60.105 55.000 0.00 0.00 39.77 4.34
410 411 0.763035 CGGGGATCGGAAATAGGGTT 59.237 55.000 0.00 0.00 34.75 4.11
411 412 1.142262 CGGGGATCGGAAATAGGGTTT 59.858 52.381 0.00 0.00 34.75 3.27
412 413 2.422377 CGGGGATCGGAAATAGGGTTTT 60.422 50.000 0.00 0.00 34.75 2.43
413 414 3.181452 CGGGGATCGGAAATAGGGTTTTA 60.181 47.826 0.00 0.00 34.75 1.52
414 415 4.395625 GGGGATCGGAAATAGGGTTTTAG 58.604 47.826 0.00 0.00 0.00 1.85
415 416 4.395625 GGGATCGGAAATAGGGTTTTAGG 58.604 47.826 0.00 0.00 0.00 2.69
416 417 4.141321 GGGATCGGAAATAGGGTTTTAGGT 60.141 45.833 0.00 0.00 0.00 3.08
417 418 5.443283 GGATCGGAAATAGGGTTTTAGGTT 58.557 41.667 0.00 0.00 0.00 3.50
418 419 5.889853 GGATCGGAAATAGGGTTTTAGGTTT 59.110 40.000 0.00 0.00 0.00 3.27
419 420 6.183360 GGATCGGAAATAGGGTTTTAGGTTTG 60.183 42.308 0.00 0.00 0.00 2.93
420 421 4.460034 TCGGAAATAGGGTTTTAGGTTTGC 59.540 41.667 0.00 0.00 0.00 3.68
421 422 4.381185 CGGAAATAGGGTTTTAGGTTTGCC 60.381 45.833 0.00 0.00 0.00 4.52
422 423 4.081309 GGAAATAGGGTTTTAGGTTTGCCC 60.081 45.833 0.00 0.00 39.60 5.36
425 426 3.451402 AGGGTTTTAGGTTTGCCCTAG 57.549 47.619 0.00 0.00 46.99 3.02
426 427 2.720254 AGGGTTTTAGGTTTGCCCTAGT 59.280 45.455 0.00 0.00 46.99 2.57
427 428 2.823747 GGGTTTTAGGTTTGCCCTAGTG 59.176 50.000 0.00 0.00 46.62 2.74
428 429 2.823747 GGTTTTAGGTTTGCCCTAGTGG 59.176 50.000 0.00 0.00 46.62 4.00
457 458 2.833244 CCAGTTGGCCTTTTTCCCA 58.167 52.632 3.32 0.00 0.00 4.37
458 459 1.127343 CCAGTTGGCCTTTTTCCCAA 58.873 50.000 3.32 0.00 38.71 4.12
459 460 1.488393 CCAGTTGGCCTTTTTCCCAAA 59.512 47.619 3.32 0.00 42.32 3.28
460 461 2.106338 CCAGTTGGCCTTTTTCCCAAAT 59.894 45.455 3.32 0.00 42.32 2.32
461 462 3.434882 CCAGTTGGCCTTTTTCCCAAATT 60.435 43.478 3.32 0.00 42.32 1.82
462 463 3.814842 CAGTTGGCCTTTTTCCCAAATTC 59.185 43.478 3.32 0.00 42.32 2.17
463 464 3.716353 AGTTGGCCTTTTTCCCAAATTCT 59.284 39.130 3.32 0.00 42.32 2.40
464 465 4.065088 GTTGGCCTTTTTCCCAAATTCTC 58.935 43.478 3.32 0.00 42.32 2.87
465 466 3.586429 TGGCCTTTTTCCCAAATTCTCT 58.414 40.909 3.32 0.00 0.00 3.10
466 467 3.578282 TGGCCTTTTTCCCAAATTCTCTC 59.422 43.478 3.32 0.00 0.00 3.20
467 468 3.834813 GGCCTTTTTCCCAAATTCTCTCT 59.165 43.478 0.00 0.00 0.00 3.10
468 469 4.081972 GGCCTTTTTCCCAAATTCTCTCTC 60.082 45.833 0.00 0.00 0.00 3.20
469 470 4.769488 GCCTTTTTCCCAAATTCTCTCTCT 59.231 41.667 0.00 0.00 0.00 3.10
470 471 5.244851 GCCTTTTTCCCAAATTCTCTCTCTT 59.755 40.000 0.00 0.00 0.00 2.85
471 472 6.685657 CCTTTTTCCCAAATTCTCTCTCTTG 58.314 40.000 0.00 0.00 0.00 3.02
472 473 6.266330 CCTTTTTCCCAAATTCTCTCTCTTGT 59.734 38.462 0.00 0.00 0.00 3.16
473 474 6.884280 TTTTCCCAAATTCTCTCTCTTGTC 57.116 37.500 0.00 0.00 0.00 3.18
474 475 5.567037 TTCCCAAATTCTCTCTCTTGTCA 57.433 39.130 0.00 0.00 0.00 3.58
475 476 5.768980 TCCCAAATTCTCTCTCTTGTCAT 57.231 39.130 0.00 0.00 0.00 3.06
476 477 6.131972 TCCCAAATTCTCTCTCTTGTCATT 57.868 37.500 0.00 0.00 0.00 2.57
477 478 7.257790 TCCCAAATTCTCTCTCTTGTCATTA 57.742 36.000 0.00 0.00 0.00 1.90
478 479 7.106239 TCCCAAATTCTCTCTCTTGTCATTAC 58.894 38.462 0.00 0.00 0.00 1.89
479 480 6.881065 CCCAAATTCTCTCTCTTGTCATTACA 59.119 38.462 0.00 0.00 0.00 2.41
480 481 7.555554 CCCAAATTCTCTCTCTTGTCATTACAT 59.444 37.037 0.00 0.00 34.97 2.29
481 482 9.605275 CCAAATTCTCTCTCTTGTCATTACATA 57.395 33.333 0.00 0.00 34.97 2.29
491 492 9.832445 TCTCTTGTCATTACATAAATTAGGACC 57.168 33.333 0.00 0.00 34.97 4.46
492 493 8.974060 TCTTGTCATTACATAAATTAGGACCC 57.026 34.615 0.00 0.00 34.97 4.46
493 494 7.996644 TCTTGTCATTACATAAATTAGGACCCC 59.003 37.037 0.00 0.00 34.97 4.95
494 495 7.460214 TGTCATTACATAAATTAGGACCCCT 57.540 36.000 0.00 0.00 37.71 4.79
495 496 7.514721 TGTCATTACATAAATTAGGACCCCTC 58.485 38.462 0.00 0.00 34.61 4.30
496 497 7.128109 TGTCATTACATAAATTAGGACCCCTCA 59.872 37.037 0.00 0.00 34.61 3.86
497 498 7.996644 GTCATTACATAAATTAGGACCCCTCAA 59.003 37.037 0.00 0.00 34.61 3.02
498 499 8.561769 TCATTACATAAATTAGGACCCCTCAAA 58.438 33.333 0.00 0.00 34.61 2.69
499 500 9.196139 CATTACATAAATTAGGACCCCTCAAAA 57.804 33.333 0.00 0.00 34.61 2.44
500 501 9.777008 ATTACATAAATTAGGACCCCTCAAAAA 57.223 29.630 0.00 0.00 34.61 1.94
532 533 8.924511 AAAATTAGGAAAAGAGACAGTGATGA 57.075 30.769 0.00 0.00 0.00 2.92
533 534 8.924511 AAATTAGGAAAAGAGACAGTGATGAA 57.075 30.769 0.00 0.00 0.00 2.57
534 535 8.924511 AATTAGGAAAAGAGACAGTGATGAAA 57.075 30.769 0.00 0.00 0.00 2.69
535 536 8.924511 ATTAGGAAAAGAGACAGTGATGAAAA 57.075 30.769 0.00 0.00 0.00 2.29
536 537 8.746052 TTAGGAAAAGAGACAGTGATGAAAAA 57.254 30.769 0.00 0.00 0.00 1.94
558 559 8.519799 AAAAATAAATAGCTAGCTAGGTTGCA 57.480 30.769 28.98 13.18 35.39 4.08
559 560 8.519799 AAAATAAATAGCTAGCTAGGTTGCAA 57.480 30.769 28.98 12.82 35.39 4.08
560 561 7.736447 AATAAATAGCTAGCTAGGTTGCAAG 57.264 36.000 28.98 7.96 35.39 4.01
561 562 3.760580 ATAGCTAGCTAGGTTGCAAGG 57.239 47.619 28.98 0.00 35.39 3.61
562 563 1.573108 AGCTAGCTAGGTTGCAAGGA 58.427 50.000 26.03 0.00 34.99 3.36
563 564 1.909302 AGCTAGCTAGGTTGCAAGGAA 59.091 47.619 26.03 0.00 34.99 3.36
564 565 2.305927 AGCTAGCTAGGTTGCAAGGAAA 59.694 45.455 26.03 0.00 34.99 3.13
565 566 3.081804 GCTAGCTAGGTTGCAAGGAAAA 58.918 45.455 22.10 0.00 34.99 2.29
566 567 3.506067 GCTAGCTAGGTTGCAAGGAAAAA 59.494 43.478 22.10 0.00 34.99 1.94
567 568 4.158579 GCTAGCTAGGTTGCAAGGAAAAAT 59.841 41.667 22.10 0.00 34.99 1.82
568 569 5.357032 GCTAGCTAGGTTGCAAGGAAAAATA 59.643 40.000 22.10 0.00 34.99 1.40
569 570 6.039829 GCTAGCTAGGTTGCAAGGAAAAATAT 59.960 38.462 22.10 0.00 34.99 1.28
570 571 6.212888 AGCTAGGTTGCAAGGAAAAATATG 57.787 37.500 0.00 0.00 34.99 1.78
571 572 5.951747 AGCTAGGTTGCAAGGAAAAATATGA 59.048 36.000 0.00 0.00 34.99 2.15
572 573 6.437162 AGCTAGGTTGCAAGGAAAAATATGAA 59.563 34.615 0.00 0.00 34.99 2.57
573 574 7.039082 AGCTAGGTTGCAAGGAAAAATATGAAA 60.039 33.333 0.00 0.00 34.99 2.69
574 575 7.063426 GCTAGGTTGCAAGGAAAAATATGAAAC 59.937 37.037 0.00 0.00 31.74 2.78
575 576 7.066307 AGGTTGCAAGGAAAAATATGAAACT 57.934 32.000 0.00 0.00 32.88 2.66
576 577 7.508687 AGGTTGCAAGGAAAAATATGAAACTT 58.491 30.769 0.00 0.00 32.88 2.66
577 578 7.992608 AGGTTGCAAGGAAAAATATGAAACTTT 59.007 29.630 0.00 0.00 32.88 2.66
578 579 8.620416 GGTTGCAAGGAAAAATATGAAACTTTT 58.380 29.630 0.00 0.00 32.88 2.27
579 580 9.650371 GTTGCAAGGAAAAATATGAAACTTTTC 57.350 29.630 0.00 2.29 38.01 2.29
586 587 7.728847 AAAAATATGAAACTTTTCCTGTGGC 57.271 32.000 0.00 0.00 36.36 5.01
587 588 4.701956 ATATGAAACTTTTCCTGTGGCG 57.298 40.909 0.00 0.00 36.36 5.69
588 589 1.757682 TGAAACTTTTCCTGTGGCGT 58.242 45.000 0.00 0.00 36.36 5.68
589 590 1.403679 TGAAACTTTTCCTGTGGCGTG 59.596 47.619 0.00 0.00 36.36 5.34
590 591 0.102300 AAACTTTTCCTGTGGCGTGC 59.898 50.000 0.00 0.00 0.00 5.34
591 592 1.034838 AACTTTTCCTGTGGCGTGCA 61.035 50.000 0.00 0.00 0.00 4.57
592 593 0.823356 ACTTTTCCTGTGGCGTGCAT 60.823 50.000 0.00 0.00 0.00 3.96
593 594 0.387622 CTTTTCCTGTGGCGTGCATG 60.388 55.000 0.09 0.09 0.00 4.06
594 595 1.106351 TTTTCCTGTGGCGTGCATGT 61.106 50.000 7.93 0.00 0.00 3.21
595 596 1.514678 TTTCCTGTGGCGTGCATGTC 61.515 55.000 2.79 2.79 0.00 3.06
596 597 3.434319 CCTGTGGCGTGCATGTCC 61.434 66.667 8.30 10.03 0.00 4.02
597 598 2.669229 CTGTGGCGTGCATGTCCA 60.669 61.111 15.41 15.41 0.00 4.02
600 601 2.203266 TGGCGTGCATGTCCACAA 60.203 55.556 15.41 0.00 35.47 3.33
601 602 1.825622 TGGCGTGCATGTCCACAAA 60.826 52.632 15.41 0.00 35.47 2.83
602 603 1.361993 GGCGTGCATGTCCACAAAA 59.638 52.632 7.93 0.00 35.47 2.44
603 604 0.664166 GGCGTGCATGTCCACAAAAG 60.664 55.000 7.93 0.00 35.47 2.27
604 605 0.310543 GCGTGCATGTCCACAAAAGA 59.689 50.000 7.93 0.00 35.47 2.52
605 606 1.268999 GCGTGCATGTCCACAAAAGAA 60.269 47.619 7.93 0.00 35.47 2.52
606 607 2.653890 CGTGCATGTCCACAAAAGAAG 58.346 47.619 0.00 0.00 35.47 2.85
607 608 2.033299 CGTGCATGTCCACAAAAGAAGT 59.967 45.455 0.00 0.00 35.47 3.01
608 609 3.489059 CGTGCATGTCCACAAAAGAAGTT 60.489 43.478 0.00 0.00 35.47 2.66
609 610 4.044426 GTGCATGTCCACAAAAGAAGTTC 58.956 43.478 0.00 0.00 35.80 3.01
610 611 3.068024 TGCATGTCCACAAAAGAAGTTCC 59.932 43.478 0.00 0.00 0.00 3.62
611 612 3.068024 GCATGTCCACAAAAGAAGTTCCA 59.932 43.478 0.00 0.00 0.00 3.53
612 613 4.610945 CATGTCCACAAAAGAAGTTCCAC 58.389 43.478 0.00 0.00 0.00 4.02
613 614 3.020984 TGTCCACAAAAGAAGTTCCACC 58.979 45.455 0.00 0.00 0.00 4.61
614 615 3.020984 GTCCACAAAAGAAGTTCCACCA 58.979 45.455 0.00 0.00 0.00 4.17
615 616 3.445805 GTCCACAAAAGAAGTTCCACCAA 59.554 43.478 0.00 0.00 0.00 3.67
616 617 4.081917 GTCCACAAAAGAAGTTCCACCAAA 60.082 41.667 0.00 0.00 0.00 3.28
617 618 4.528596 TCCACAAAAGAAGTTCCACCAAAA 59.471 37.500 0.00 0.00 0.00 2.44
618 619 5.188751 TCCACAAAAGAAGTTCCACCAAAAT 59.811 36.000 0.00 0.00 0.00 1.82
619 620 5.879777 CCACAAAAGAAGTTCCACCAAAATT 59.120 36.000 0.00 0.00 0.00 1.82
620 621 6.374053 CCACAAAAGAAGTTCCACCAAAATTT 59.626 34.615 0.00 0.00 0.00 1.82
621 622 7.242783 CACAAAAGAAGTTCCACCAAAATTTG 58.757 34.615 0.00 0.00 0.00 2.32
622 623 6.128035 ACAAAAGAAGTTCCACCAAAATTTGC 60.128 34.615 0.00 0.00 0.00 3.68
623 624 4.751767 AGAAGTTCCACCAAAATTTGCA 57.248 36.364 0.00 0.00 0.00 4.08
624 625 4.696455 AGAAGTTCCACCAAAATTTGCAG 58.304 39.130 0.00 0.00 0.00 4.41
625 626 4.405358 AGAAGTTCCACCAAAATTTGCAGA 59.595 37.500 0.00 0.00 0.00 4.26
626 627 4.751767 AGTTCCACCAAAATTTGCAGAA 57.248 36.364 0.00 0.34 0.00 3.02
627 628 5.294734 AGTTCCACCAAAATTTGCAGAAT 57.705 34.783 0.00 0.00 0.00 2.40
628 629 5.683681 AGTTCCACCAAAATTTGCAGAATT 58.316 33.333 0.00 0.00 0.00 2.17
629 630 6.121590 AGTTCCACCAAAATTTGCAGAATTT 58.878 32.000 0.00 11.43 0.00 1.82
630 631 6.602803 AGTTCCACCAAAATTTGCAGAATTTT 59.397 30.769 18.45 18.45 39.60 1.82
639 640 9.356433 CAAAATTTGCAGAATTTTGGAAAAAGT 57.644 25.926 28.92 5.78 46.15 2.66
640 641 9.926158 AAAATTTGCAGAATTTTGGAAAAAGTT 57.074 22.222 17.44 10.44 40.87 2.66
641 642 9.926158 AAATTTGCAGAATTTTGGAAAAAGTTT 57.074 22.222 17.44 11.67 40.87 2.66
642 643 9.926158 AATTTGCAGAATTTTGGAAAAAGTTTT 57.074 22.222 17.44 6.39 40.87 2.43
643 644 8.739649 TTTGCAGAATTTTGGAAAAAGTTTTG 57.260 26.923 12.34 0.00 35.79 2.44
644 645 6.850555 TGCAGAATTTTGGAAAAAGTTTTGG 58.149 32.000 0.61 0.00 0.00 3.28
645 646 6.127786 TGCAGAATTTTGGAAAAAGTTTTGGG 60.128 34.615 0.61 0.00 0.00 4.12
646 647 6.680131 GCAGAATTTTGGAAAAAGTTTTGGGG 60.680 38.462 0.61 0.00 0.00 4.96
647 648 5.890985 AGAATTTTGGAAAAAGTTTTGGGGG 59.109 36.000 0.61 0.00 0.00 5.40
648 649 2.719531 TTGGAAAAAGTTTTGGGGGC 57.280 45.000 0.61 0.00 0.00 5.80
649 650 0.840617 TGGAAAAAGTTTTGGGGGCC 59.159 50.000 0.61 0.00 0.00 5.80
650 651 0.840617 GGAAAAAGTTTTGGGGGCCA 59.159 50.000 4.39 0.00 0.00 5.36
651 652 1.213182 GGAAAAAGTTTTGGGGGCCAA 59.787 47.619 4.39 0.00 42.29 4.52
659 660 2.777459 TTTGGGGGCCAAACTTCTAA 57.223 45.000 4.39 0.00 46.92 2.10
660 661 2.003937 TTGGGGGCCAAACTTCTAAC 57.996 50.000 4.39 0.00 40.92 2.34
661 662 1.154430 TGGGGGCCAAACTTCTAACT 58.846 50.000 4.39 0.00 0.00 2.24
662 663 1.203001 TGGGGGCCAAACTTCTAACTG 60.203 52.381 4.39 0.00 0.00 3.16
663 664 1.074889 GGGGGCCAAACTTCTAACTGA 59.925 52.381 4.39 0.00 0.00 3.41
664 665 2.490168 GGGGGCCAAACTTCTAACTGAA 60.490 50.000 4.39 0.00 0.00 3.02
665 666 3.227614 GGGGCCAAACTTCTAACTGAAA 58.772 45.455 4.39 0.00 33.79 2.69
666 667 3.639561 GGGGCCAAACTTCTAACTGAAAA 59.360 43.478 4.39 0.00 33.79 2.29
667 668 4.500887 GGGGCCAAACTTCTAACTGAAAAC 60.501 45.833 4.39 0.00 33.79 2.43
668 669 4.287720 GGCCAAACTTCTAACTGAAAACG 58.712 43.478 0.00 0.00 33.79 3.60
669 670 4.287720 GCCAAACTTCTAACTGAAAACGG 58.712 43.478 0.00 0.00 33.79 4.44
670 671 4.791734 GCCAAACTTCTAACTGAAAACGGG 60.792 45.833 0.00 0.00 33.79 5.28
671 672 4.287720 CAAACTTCTAACTGAAAACGGGC 58.712 43.478 0.00 0.00 33.79 6.13
672 673 2.501261 ACTTCTAACTGAAAACGGGCC 58.499 47.619 0.00 0.00 33.79 5.80
673 674 1.810755 CTTCTAACTGAAAACGGGCCC 59.189 52.381 13.57 13.57 33.79 5.80
674 675 0.766131 TCTAACTGAAAACGGGCCCA 59.234 50.000 24.92 0.00 0.00 5.36
675 676 1.353022 TCTAACTGAAAACGGGCCCAT 59.647 47.619 24.92 1.91 0.00 4.00
676 677 1.472480 CTAACTGAAAACGGGCCCATG 59.528 52.381 24.92 9.21 0.00 3.66
677 678 0.469144 AACTGAAAACGGGCCCATGT 60.469 50.000 24.92 10.01 0.00 3.21
678 679 0.893727 ACTGAAAACGGGCCCATGTC 60.894 55.000 24.92 15.22 0.00 3.06
679 680 1.595093 CTGAAAACGGGCCCATGTCC 61.595 60.000 24.92 8.11 0.00 4.02
680 681 1.304134 GAAAACGGGCCCATGTCCT 60.304 57.895 24.92 2.83 32.45 3.85
681 682 0.034863 GAAAACGGGCCCATGTCCTA 60.035 55.000 24.92 0.00 32.45 2.94
682 683 0.034477 AAAACGGGCCCATGTCCTAG 60.034 55.000 24.92 4.83 32.45 3.02
683 684 1.205460 AAACGGGCCCATGTCCTAGT 61.205 55.000 24.92 5.61 32.45 2.57
684 685 1.910580 AACGGGCCCATGTCCTAGTG 61.911 60.000 24.92 3.12 32.45 2.74
685 686 2.919043 GGGCCCATGTCCTAGTGG 59.081 66.667 19.95 0.00 31.67 4.00
713 714 4.965283 AAAAATAGTGGGAAGGGGATGA 57.035 40.909 0.00 0.00 0.00 2.92
714 715 5.487861 AAAAATAGTGGGAAGGGGATGAT 57.512 39.130 0.00 0.00 0.00 2.45
715 716 4.459852 AAATAGTGGGAAGGGGATGATG 57.540 45.455 0.00 0.00 0.00 3.07
716 717 1.819753 TAGTGGGAAGGGGATGATGG 58.180 55.000 0.00 0.00 0.00 3.51
717 718 0.995675 AGTGGGAAGGGGATGATGGG 60.996 60.000 0.00 0.00 0.00 4.00
718 719 0.993509 GTGGGAAGGGGATGATGGGA 60.994 60.000 0.00 0.00 0.00 4.37
719 720 0.698886 TGGGAAGGGGATGATGGGAG 60.699 60.000 0.00 0.00 0.00 4.30
720 721 1.430369 GGGAAGGGGATGATGGGAGG 61.430 65.000 0.00 0.00 0.00 4.30
721 722 0.699231 GGAAGGGGATGATGGGAGGT 60.699 60.000 0.00 0.00 0.00 3.85
722 723 1.416013 GGAAGGGGATGATGGGAGGTA 60.416 57.143 0.00 0.00 0.00 3.08
723 724 2.418669 GAAGGGGATGATGGGAGGTAA 58.581 52.381 0.00 0.00 0.00 2.85
724 725 2.124560 AGGGGATGATGGGAGGTAAG 57.875 55.000 0.00 0.00 0.00 2.34
725 726 1.585592 AGGGGATGATGGGAGGTAAGA 59.414 52.381 0.00 0.00 0.00 2.10
726 727 1.700186 GGGGATGATGGGAGGTAAGAC 59.300 57.143 0.00 0.00 0.00 3.01
727 728 1.344763 GGGATGATGGGAGGTAAGACG 59.655 57.143 0.00 0.00 0.00 4.18
728 729 2.317040 GGATGATGGGAGGTAAGACGA 58.683 52.381 0.00 0.00 0.00 4.20
729 730 2.698797 GGATGATGGGAGGTAAGACGAA 59.301 50.000 0.00 0.00 0.00 3.85
730 731 3.134081 GGATGATGGGAGGTAAGACGAAA 59.866 47.826 0.00 0.00 0.00 3.46
731 732 4.383770 GGATGATGGGAGGTAAGACGAAAA 60.384 45.833 0.00 0.00 0.00 2.29
732 733 4.837093 TGATGGGAGGTAAGACGAAAAT 57.163 40.909 0.00 0.00 0.00 1.82
733 734 5.943349 TGATGGGAGGTAAGACGAAAATA 57.057 39.130 0.00 0.00 0.00 1.40
734 735 6.302535 TGATGGGAGGTAAGACGAAAATAA 57.697 37.500 0.00 0.00 0.00 1.40
735 736 6.713276 TGATGGGAGGTAAGACGAAAATAAA 58.287 36.000 0.00 0.00 0.00 1.40
736 737 6.596497 TGATGGGAGGTAAGACGAAAATAAAC 59.404 38.462 0.00 0.00 0.00 2.01
737 738 5.247862 TGGGAGGTAAGACGAAAATAAACC 58.752 41.667 0.00 0.00 0.00 3.27
738 739 4.330894 GGGAGGTAAGACGAAAATAAACCG 59.669 45.833 0.00 0.00 0.00 4.44
739 740 4.330894 GGAGGTAAGACGAAAATAAACCGG 59.669 45.833 0.00 0.00 0.00 5.28
740 741 5.151297 AGGTAAGACGAAAATAAACCGGA 57.849 39.130 9.46 0.00 0.00 5.14
741 742 4.931601 AGGTAAGACGAAAATAAACCGGAC 59.068 41.667 9.46 0.00 0.00 4.79
742 743 4.690280 GGTAAGACGAAAATAAACCGGACA 59.310 41.667 9.46 0.00 0.00 4.02
743 744 5.179182 GGTAAGACGAAAATAAACCGGACAA 59.821 40.000 9.46 0.00 0.00 3.18
744 745 5.754543 AAGACGAAAATAAACCGGACAAA 57.245 34.783 9.46 0.00 0.00 2.83
745 746 5.754543 AGACGAAAATAAACCGGACAAAA 57.245 34.783 9.46 0.00 0.00 2.44
746 747 6.134040 AGACGAAAATAAACCGGACAAAAA 57.866 33.333 9.46 0.00 0.00 1.94
747 748 6.741109 AGACGAAAATAAACCGGACAAAAAT 58.259 32.000 9.46 0.00 0.00 1.82
748 749 7.873910 AGACGAAAATAAACCGGACAAAAATA 58.126 30.769 9.46 0.00 0.00 1.40
749 750 8.351461 AGACGAAAATAAACCGGACAAAAATAA 58.649 29.630 9.46 0.00 0.00 1.40
750 751 8.868635 ACGAAAATAAACCGGACAAAAATAAA 57.131 26.923 9.46 0.00 0.00 1.40
751 752 9.310716 ACGAAAATAAACCGGACAAAAATAAAA 57.689 25.926 9.46 0.00 0.00 1.52
752 753 9.570507 CGAAAATAAACCGGACAAAAATAAAAC 57.429 29.630 9.46 0.00 0.00 2.43
753 754 9.570507 GAAAATAAACCGGACAAAAATAAAACG 57.429 29.630 9.46 0.00 0.00 3.60
754 755 7.640616 AATAAACCGGACAAAAATAAAACGG 57.359 32.000 9.46 0.00 44.86 4.44
755 756 4.915158 AACCGGACAAAAATAAAACGGA 57.085 36.364 9.46 0.00 42.19 4.69
756 757 4.227512 ACCGGACAAAAATAAAACGGAC 57.772 40.909 9.46 0.00 42.19 4.79
757 758 3.227948 CCGGACAAAAATAAAACGGACG 58.772 45.455 0.00 0.00 42.19 4.79
758 759 3.059051 CCGGACAAAAATAAAACGGACGA 60.059 43.478 0.00 0.00 42.19 4.20
759 760 4.525686 CGGACAAAAATAAAACGGACGAA 58.474 39.130 0.00 0.00 0.00 3.85
760 761 4.968788 CGGACAAAAATAAAACGGACGAAA 59.031 37.500 0.00 0.00 0.00 3.46
761 762 5.454877 CGGACAAAAATAAAACGGACGAAAA 59.545 36.000 0.00 0.00 0.00 2.29
762 763 6.142639 CGGACAAAAATAAAACGGACGAAAAT 59.857 34.615 0.00 0.00 0.00 1.82
763 764 7.323177 CGGACAAAAATAAAACGGACGAAAATA 59.677 33.333 0.00 0.00 0.00 1.40
764 765 8.966194 GGACAAAAATAAAACGGACGAAAATAA 58.034 29.630 0.00 0.00 0.00 1.40
772 773 7.942145 AAAACGGACGAAAATAAATATGACG 57.058 32.000 0.00 0.00 0.00 4.35
773 774 6.890663 AACGGACGAAAATAAATATGACGA 57.109 33.333 0.00 0.00 0.00 4.20
774 775 6.890663 ACGGACGAAAATAAATATGACGAA 57.109 33.333 0.00 0.00 0.00 3.85
775 776 7.473027 ACGGACGAAAATAAATATGACGAAT 57.527 32.000 0.00 0.00 0.00 3.34
776 777 8.578308 ACGGACGAAAATAAATATGACGAATA 57.422 30.769 0.00 0.00 0.00 1.75
777 778 9.033481 ACGGACGAAAATAAATATGACGAATAA 57.967 29.630 0.00 0.00 0.00 1.40
787 788 9.932207 ATAAATATGACGAATAATAACCGTGGA 57.068 29.630 0.00 0.00 36.60 4.02
788 789 7.647907 AATATGACGAATAATAACCGTGGAC 57.352 36.000 0.00 0.00 36.60 4.02
789 790 3.437428 TGACGAATAATAACCGTGGACG 58.563 45.455 0.00 0.00 36.60 4.79
790 791 2.195922 ACGAATAATAACCGTGGACGC 58.804 47.619 0.00 0.00 38.18 5.19
791 792 2.195096 CGAATAATAACCGTGGACGCA 58.805 47.619 0.00 0.00 38.18 5.24
792 793 2.604011 CGAATAATAACCGTGGACGCAA 59.396 45.455 0.00 0.00 38.18 4.85
793 794 3.246699 CGAATAATAACCGTGGACGCAAT 59.753 43.478 0.00 0.00 38.18 3.56
794 795 4.607557 CGAATAATAACCGTGGACGCAATC 60.608 45.833 0.00 0.00 38.18 2.67
805 806 1.599542 GGACGCAATCCTATCAACTGC 59.400 52.381 0.00 0.00 45.22 4.40
806 807 2.555199 GACGCAATCCTATCAACTGCT 58.445 47.619 0.00 0.00 0.00 4.24
807 808 2.939103 GACGCAATCCTATCAACTGCTT 59.061 45.455 0.00 0.00 0.00 3.91
808 809 3.347216 ACGCAATCCTATCAACTGCTTT 58.653 40.909 0.00 0.00 0.00 3.51
809 810 4.513442 ACGCAATCCTATCAACTGCTTTA 58.487 39.130 0.00 0.00 0.00 1.85
810 811 5.126067 ACGCAATCCTATCAACTGCTTTAT 58.874 37.500 0.00 0.00 0.00 1.40
811 812 5.590259 ACGCAATCCTATCAACTGCTTTATT 59.410 36.000 0.00 0.00 0.00 1.40
812 813 6.765989 ACGCAATCCTATCAACTGCTTTATTA 59.234 34.615 0.00 0.00 0.00 0.98
813 814 7.041780 ACGCAATCCTATCAACTGCTTTATTAG 60.042 37.037 0.00 0.00 0.00 1.73
814 815 7.171508 CGCAATCCTATCAACTGCTTTATTAGA 59.828 37.037 0.00 0.00 0.00 2.10
815 816 8.840321 GCAATCCTATCAACTGCTTTATTAGAA 58.160 33.333 0.00 0.00 0.00 2.10
876 877 0.250338 AGCTTCCGTGTTTCCACTCC 60.250 55.000 0.00 0.00 39.55 3.85
985 986 2.770048 CCTGGCCCCTCGATTCCT 60.770 66.667 0.00 0.00 0.00 3.36
986 987 2.812619 CCTGGCCCCTCGATTCCTC 61.813 68.421 0.00 0.00 0.00 3.71
987 988 3.154473 TGGCCCCTCGATTCCTCG 61.154 66.667 0.00 0.00 46.41 4.63
1289 1303 4.635324 CGCGGTTAGGGATTAAACCTTTTA 59.365 41.667 0.00 0.00 42.51 1.52
1301 1315 2.907458 ACCTTTTATGAGGCAGGCTT 57.093 45.000 0.00 0.00 40.65 4.35
1360 1374 2.507484 CTTGTGATCAAGGACCAGCAA 58.493 47.619 0.00 0.00 45.02 3.91
1461 1491 1.667724 GTGAGATGTTGCGGAAGGATG 59.332 52.381 0.00 0.00 0.00 3.51
1473 1503 2.131023 GGAAGGATGGGGATCTCACTT 58.869 52.381 0.00 0.00 0.00 3.16
1518 1549 5.471556 TCCATCAGATTTGCACAAATGTT 57.528 34.783 13.08 0.00 40.77 2.71
1537 1568 1.056660 TTGAGACTGGGGAGTGGTTC 58.943 55.000 0.00 0.00 0.00 3.62
1547 1578 3.181415 TGGGGAGTGGTTCTACTGTTCTA 60.181 47.826 0.00 0.00 0.00 2.10
1588 1621 6.126652 ACCATATGCTCTAGTGAACTGGATTT 60.127 38.462 9.28 0.00 32.93 2.17
1589 1622 7.071196 ACCATATGCTCTAGTGAACTGGATTTA 59.929 37.037 9.28 0.00 32.93 1.40
1594 1627 7.168219 TGCTCTAGTGAACTGGATTTACAAAT 58.832 34.615 0.00 0.00 32.93 2.32
1598 1631 6.594788 AGTGAACTGGATTTACAAATGCAT 57.405 33.333 8.99 0.00 44.07 3.96
1599 1632 6.624423 AGTGAACTGGATTTACAAATGCATC 58.376 36.000 8.99 6.21 44.07 3.91
1663 1697 4.036734 ACCTTTGTTCTATGCAAGTGTGTG 59.963 41.667 0.00 0.00 0.00 3.82
1700 1734 6.108687 TCTTCTGTTAGCATGTGTCCTTATG 58.891 40.000 0.00 0.00 0.00 1.90
1794 1828 2.565834 TCGTTCAGAGGGTAGGAAAAGG 59.434 50.000 0.00 0.00 0.00 3.11
1893 1927 0.251297 ACTGCCCTGCTGCACAAATA 60.251 50.000 0.00 0.00 36.04 1.40
1897 1932 1.930567 CCCTGCTGCACAAATATTGC 58.069 50.000 0.00 0.00 40.63 3.56
1945 2222 6.778069 TGTATTTCCTGTGTTTAATGTTGGGA 59.222 34.615 0.00 0.00 0.00 4.37
1946 2223 6.933514 ATTTCCTGTGTTTAATGTTGGGAT 57.066 33.333 0.00 0.00 0.00 3.85
1977 2254 5.233083 TCTGGAAAACTGTCTGTCATGAT 57.767 39.130 0.00 0.00 0.00 2.45
1993 2270 0.627451 TGATTCTTGGATGCCCTGCT 59.373 50.000 0.00 0.00 0.00 4.24
2036 2313 2.826128 TCCTATACGCCCTTATCAGCAG 59.174 50.000 0.00 0.00 0.00 4.24
2054 2331 3.054878 GCAGTTCCTTGTGCTTCATTTG 58.945 45.455 0.00 0.00 36.71 2.32
2056 2333 4.046462 CAGTTCCTTGTGCTTCATTTGTG 58.954 43.478 0.00 0.00 0.00 3.33
2057 2334 3.953612 AGTTCCTTGTGCTTCATTTGTGA 59.046 39.130 0.00 0.00 0.00 3.58
2059 2336 5.069516 AGTTCCTTGTGCTTCATTTGTGATT 59.930 36.000 0.00 0.00 0.00 2.57
2060 2337 4.873817 TCCTTGTGCTTCATTTGTGATTG 58.126 39.130 0.00 0.00 0.00 2.67
2061 2338 4.583907 TCCTTGTGCTTCATTTGTGATTGA 59.416 37.500 0.00 0.00 0.00 2.57
2064 2341 4.239304 TGTGCTTCATTTGTGATTGATGC 58.761 39.130 0.00 0.00 41.11 3.91
2065 2342 3.302434 GTGCTTCATTTGTGATTGATGCG 59.698 43.478 0.00 0.00 42.67 4.73
2066 2343 3.057386 TGCTTCATTTGTGATTGATGCGT 60.057 39.130 0.00 0.00 42.67 5.24
2087 2366 5.447818 GCGTTTTTAGCTACAATCTCTGCAT 60.448 40.000 0.00 0.00 0.00 3.96
2130 2409 2.417339 TGTGTGACTTGTCGCTAGTC 57.583 50.000 14.24 12.01 41.86 2.59
2132 2411 3.143728 TGTGTGACTTGTCGCTAGTCTA 58.856 45.455 14.24 8.06 41.99 2.59
2287 2570 6.899089 AGATATGTTATTGTGATGTCCCACA 58.101 36.000 0.00 0.00 44.45 4.17
2288 2571 7.520798 AGATATGTTATTGTGATGTCCCACAT 58.479 34.615 0.00 0.00 45.31 3.21
2366 2659 6.683974 ATGTCATTTGTACCATGTAGAAGC 57.316 37.500 0.00 0.00 0.00 3.86
2409 2702 7.973402 TCTTTGCTGTATTGGCCTATCTATAA 58.027 34.615 3.32 0.00 0.00 0.98
2458 2751 5.985781 TCGAAGCAATTTGTTTACAGAGAC 58.014 37.500 0.00 0.00 0.00 3.36
2470 2763 1.479709 ACAGAGACGCATAGGAAGCT 58.520 50.000 0.00 0.00 0.00 3.74
2504 2798 4.442192 GCTACCCCATGACTAACTCAAGAG 60.442 50.000 0.00 0.00 30.60 2.85
2534 2828 5.847304 TCTTAGTTGCCATCTATAGCAGTG 58.153 41.667 0.00 0.00 40.73 3.66
2657 2959 3.628032 TGTGCTTGTTGTCGTCCATTAAA 59.372 39.130 0.00 0.00 0.00 1.52
2792 3096 5.536161 GGTCCCATGTCAAATATGCATACTT 59.464 40.000 8.99 0.49 0.00 2.24
2823 3127 5.951747 TCAGACTAGAAATTTGGGGGAAATG 59.048 40.000 0.00 0.00 34.30 2.32
2858 3162 5.820947 ACTACTTAACACAAGTGGGACTTTG 59.179 40.000 5.08 0.00 36.03 2.77
2925 3229 5.757886 ACCAAATTTTATATGTGATCCGCG 58.242 37.500 0.00 0.00 0.00 6.46
2999 3314 8.202811 TCAATATCTGGTCTCTTCAATCTCTTG 58.797 37.037 0.00 0.00 0.00 3.02
3123 3525 7.328277 TGTAGAAGTTACATGTTTGTTGCTT 57.672 32.000 2.30 0.00 37.28 3.91
3172 3574 1.398390 GAATCGCACCACATGTCCTTC 59.602 52.381 0.00 0.00 0.00 3.46
3239 3641 6.486657 TGGAAATCCAGTGTTTAACTCTTCAG 59.513 38.462 0.00 0.00 42.01 3.02
3245 3647 5.066505 CCAGTGTTTAACTCTTCAGTGCTTT 59.933 40.000 0.00 0.00 36.83 3.51
3414 3816 5.241728 GGAGTTCTTACAAAGGCTGAAACAT 59.758 40.000 0.00 0.00 0.00 2.71
3506 3908 2.867647 GCTTGAATTCCTTGGCCACAAC 60.868 50.000 3.88 0.00 32.14 3.32
3528 3930 1.270826 CCAGCGACTGTTCTTCTCTCA 59.729 52.381 6.19 0.00 0.00 3.27
3561 3963 2.143925 GGGTTGCTATTACATCGGAGC 58.856 52.381 0.00 0.00 35.43 4.70
3653 4055 0.613853 TGAGGGGGAACTCGATTCGT 60.614 55.000 5.89 0.00 40.39 3.85
3709 4111 2.170397 TGGTCAGACTCAGCTGTTTCAA 59.830 45.455 14.67 1.52 37.20 2.69
3795 4197 2.540265 CAGTTGTTCTGCTCTGGAGT 57.460 50.000 0.00 0.00 37.36 3.85
3801 4203 6.016777 CAGTTGTTCTGCTCTGGAGTTATTTT 60.017 38.462 0.00 0.00 37.36 1.82
4034 4436 0.396556 ATGCTCATGCCATGCTTCCA 60.397 50.000 0.00 0.00 38.71 3.53
4103 4505 9.853555 CTCAAGGTATATTCATCTGACAGATAC 57.146 37.037 17.54 10.81 32.12 2.24
4227 4629 5.721960 AGTACCTGAGGATAACTGTTGATGT 59.278 40.000 4.99 0.00 0.00 3.06
4232 4634 8.938883 ACCTGAGGATAACTGTTGATGTATATT 58.061 33.333 4.99 0.00 0.00 1.28
4242 4644 9.685276 AACTGTTGATGTATATTCATTTCCTCA 57.315 29.630 0.00 0.00 0.00 3.86
4393 4798 7.833285 TTAAGTTGGCTTTTCATCTTTAGGT 57.167 32.000 0.00 0.00 36.22 3.08
4415 4820 0.107508 CAGAACCCATGGAGCACGAT 60.108 55.000 15.22 0.00 0.00 3.73
4786 5193 8.803201 TGAGTTTTAGATGTCAAGCTATATCG 57.197 34.615 0.00 0.00 0.00 2.92
4868 5275 5.418209 ACCTGGAGTAGTACAAGTGTGTATC 59.582 44.000 0.00 0.00 42.18 2.24
5000 5407 8.745837 CAAACAGTTTTCAGAAATGTGATGTAC 58.254 33.333 10.61 0.00 0.00 2.90
5001 5408 7.807977 ACAGTTTTCAGAAATGTGATGTACT 57.192 32.000 10.61 0.75 0.00 2.73
5002 5409 7.865707 ACAGTTTTCAGAAATGTGATGTACTC 58.134 34.615 10.61 0.00 0.00 2.59
5003 5410 7.041098 ACAGTTTTCAGAAATGTGATGTACTCC 60.041 37.037 10.61 0.00 0.00 3.85
5004 5411 6.431234 AGTTTTCAGAAATGTGATGTACTCCC 59.569 38.462 0.00 0.00 0.00 4.30
5005 5412 5.762179 TTCAGAAATGTGATGTACTCCCT 57.238 39.130 0.00 0.00 0.00 4.20
5006 5413 5.344743 TCAGAAATGTGATGTACTCCCTC 57.655 43.478 0.00 0.00 0.00 4.30
5007 5414 4.162320 TCAGAAATGTGATGTACTCCCTCC 59.838 45.833 0.00 0.00 0.00 4.30
5008 5415 3.133003 AGAAATGTGATGTACTCCCTCCG 59.867 47.826 0.00 0.00 0.00 4.63
5009 5416 2.160721 ATGTGATGTACTCCCTCCGT 57.839 50.000 0.00 0.00 0.00 4.69
5010 5417 1.471119 TGTGATGTACTCCCTCCGTC 58.529 55.000 0.00 0.00 0.00 4.79
5011 5418 0.745468 GTGATGTACTCCCTCCGTCC 59.255 60.000 0.00 0.00 0.00 4.79
5012 5419 0.750546 TGATGTACTCCCTCCGTCCG 60.751 60.000 0.00 0.00 0.00 4.79
5013 5420 0.465097 GATGTACTCCCTCCGTCCGA 60.465 60.000 0.00 0.00 0.00 4.55
5014 5421 0.033796 ATGTACTCCCTCCGTCCGAA 60.034 55.000 0.00 0.00 0.00 4.30
5015 5422 0.251297 TGTACTCCCTCCGTCCGAAA 60.251 55.000 0.00 0.00 0.00 3.46
5016 5423 0.890683 GTACTCCCTCCGTCCGAAAA 59.109 55.000 0.00 0.00 0.00 2.29
5017 5424 1.479730 GTACTCCCTCCGTCCGAAAAT 59.520 52.381 0.00 0.00 0.00 1.82
5018 5425 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
5019 5426 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
5020 5427 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
5021 5428 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
5022 5429 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
5023 5430 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
5024 5431 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
5025 5432 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
5026 5433 4.181578 CTCCGTCCGAAAATACTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
5027 5434 4.178540 TCCGTCCGAAAATACTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
5028 5435 3.930229 CCGTCCGAAAATACTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
5029 5436 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
5030 5437 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
5031 5438 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
5032 5439 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
5033 5440 7.007367 CGTCCGAAAATACTTGTCATCAAAATG 59.993 37.037 0.00 0.00 32.87 2.32
5034 5441 7.273381 GTCCGAAAATACTTGTCATCAAAATGG 59.727 37.037 0.00 0.00 33.42 3.16
5035 5442 7.175816 TCCGAAAATACTTGTCATCAAAATGGA 59.824 33.333 0.00 0.00 33.42 3.41
5036 5443 7.975616 CCGAAAATACTTGTCATCAAAATGGAT 59.024 33.333 0.00 0.00 33.42 3.41
5044 5451 9.918630 ACTTGTCATCAAAATGGATAAAAAGAG 57.081 29.630 0.00 0.00 33.42 2.85
5072 5479 9.317936 TGTATCTAGAACTAAAATACGTCTCGA 57.682 33.333 0.00 0.00 0.00 4.04
5076 5483 9.317936 TCTAGAACTAAAATACGTCTCGATACA 57.682 33.333 0.00 0.00 0.00 2.29
5079 5486 8.074972 AGAACTAAAATACGTCTCGATACATCC 58.925 37.037 0.00 0.00 0.00 3.51
5080 5487 6.675987 ACTAAAATACGTCTCGATACATCCC 58.324 40.000 0.00 0.00 0.00 3.85
5081 5488 4.516365 AAATACGTCTCGATACATCCCC 57.484 45.455 0.00 0.00 0.00 4.81
5082 5489 2.945080 TACGTCTCGATACATCCCCT 57.055 50.000 0.00 0.00 0.00 4.79
5083 5490 2.068834 ACGTCTCGATACATCCCCTT 57.931 50.000 1.64 0.00 0.00 3.95
5084 5491 2.385803 ACGTCTCGATACATCCCCTTT 58.614 47.619 1.64 0.00 0.00 3.11
5085 5492 2.764572 ACGTCTCGATACATCCCCTTTT 59.235 45.455 1.64 0.00 0.00 2.27
5086 5493 3.956199 ACGTCTCGATACATCCCCTTTTA 59.044 43.478 1.64 0.00 0.00 1.52
5087 5494 4.587684 ACGTCTCGATACATCCCCTTTTAT 59.412 41.667 1.64 0.00 0.00 1.40
5088 5495 5.070047 ACGTCTCGATACATCCCCTTTTATT 59.930 40.000 1.64 0.00 0.00 1.40
5089 5496 5.634020 CGTCTCGATACATCCCCTTTTATTC 59.366 44.000 1.64 0.00 0.00 1.75
5090 5497 6.522054 GTCTCGATACATCCCCTTTTATTCA 58.478 40.000 0.00 0.00 0.00 2.57
5091 5498 7.162082 GTCTCGATACATCCCCTTTTATTCAT 58.838 38.462 0.00 0.00 0.00 2.57
5092 5499 7.661847 GTCTCGATACATCCCCTTTTATTCATT 59.338 37.037 0.00 0.00 0.00 2.57
5093 5500 8.217799 TCTCGATACATCCCCTTTTATTCATTT 58.782 33.333 0.00 0.00 0.00 2.32
5094 5501 8.760980 TCGATACATCCCCTTTTATTCATTTT 57.239 30.769 0.00 0.00 0.00 1.82
5095 5502 8.629158 TCGATACATCCCCTTTTATTCATTTTG 58.371 33.333 0.00 0.00 0.00 2.44
5096 5503 8.629158 CGATACATCCCCTTTTATTCATTTTGA 58.371 33.333 0.00 0.00 0.00 2.69
5099 5506 8.378115 ACATCCCCTTTTATTCATTTTGATGA 57.622 30.769 0.00 0.00 32.39 2.92
5100 5507 8.260114 ACATCCCCTTTTATTCATTTTGATGAC 58.740 33.333 0.00 0.00 32.39 3.06
5101 5508 7.789202 TCCCCTTTTATTCATTTTGATGACA 57.211 32.000 0.00 0.00 0.00 3.58
5102 5509 8.200024 TCCCCTTTTATTCATTTTGATGACAA 57.800 30.769 0.00 0.00 0.00 3.18
5103 5510 8.313292 TCCCCTTTTATTCATTTTGATGACAAG 58.687 33.333 0.00 0.00 37.32 3.16
5104 5511 8.096414 CCCCTTTTATTCATTTTGATGACAAGT 58.904 33.333 0.00 0.00 37.32 3.16
5111 5518 8.915871 ATTCATTTTGATGACAAGTATTTCCG 57.084 30.769 0.00 0.00 37.32 4.30
5112 5519 6.851609 TCATTTTGATGACAAGTATTTCCGG 58.148 36.000 0.00 0.00 37.32 5.14
5113 5520 6.657117 TCATTTTGATGACAAGTATTTCCGGA 59.343 34.615 0.00 0.00 37.32 5.14
5114 5521 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
5115 5522 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
5116 5523 3.056393 TGATGACAAGTATTTCCGGACGT 60.056 43.478 1.83 0.00 0.00 4.34
5117 5524 4.158209 TGATGACAAGTATTTCCGGACGTA 59.842 41.667 1.83 0.00 0.00 3.57
5118 5525 4.100707 TGACAAGTATTTCCGGACGTAG 57.899 45.455 1.83 0.00 0.00 3.51
5119 5526 3.119388 TGACAAGTATTTCCGGACGTAGG 60.119 47.826 1.83 3.31 0.00 3.18
5120 5527 2.167075 ACAAGTATTTCCGGACGTAGGG 59.833 50.000 1.83 4.00 0.00 3.53
5121 5528 2.428171 CAAGTATTTCCGGACGTAGGGA 59.572 50.000 1.83 6.35 0.00 4.20
5122 5529 2.305009 AGTATTTCCGGACGTAGGGAG 58.695 52.381 1.83 0.00 33.01 4.30
5123 5530 2.027385 GTATTTCCGGACGTAGGGAGT 58.973 52.381 1.83 0.97 33.01 3.85
5124 5531 2.442236 ATTTCCGGACGTAGGGAGTA 57.558 50.000 1.83 2.63 33.01 2.59
5285 5859 7.547370 AGAATCTACTTCAGTACAGCAAATCAC 59.453 37.037 0.00 0.00 36.24 3.06
5383 5962 4.709886 TGCAGTATAGCAGGTTCAGACTTA 59.290 41.667 0.00 0.00 40.11 2.24
5442 6027 7.835682 TCCCATGACAAGAATCACAAGATTAAT 59.164 33.333 0.00 0.00 44.30 1.40
5443 6028 9.123902 CCCATGACAAGAATCACAAGATTAATA 57.876 33.333 0.00 0.00 44.30 0.98
5452 6037 9.941664 AGAATCACAAGATTAATAATGAAAGCG 57.058 29.630 6.90 0.00 44.30 4.68
5453 6038 9.173939 GAATCACAAGATTAATAATGAAAGCGG 57.826 33.333 6.90 0.00 44.30 5.52
5454 6039 7.026631 TCACAAGATTAATAATGAAAGCGGG 57.973 36.000 6.90 0.00 0.00 6.13
5455 6040 6.826231 TCACAAGATTAATAATGAAAGCGGGA 59.174 34.615 6.90 0.00 0.00 5.14
5456 6041 7.012327 TCACAAGATTAATAATGAAAGCGGGAG 59.988 37.037 6.90 0.00 0.00 4.30
5457 6042 7.012327 CACAAGATTAATAATGAAAGCGGGAGA 59.988 37.037 6.90 0.00 0.00 3.71
5458 6043 7.227512 ACAAGATTAATAATGAAAGCGGGAGAG 59.772 37.037 6.90 0.00 0.00 3.20
5490 6078 2.030562 CGAGACACCAAAGGGCGT 59.969 61.111 0.00 0.00 37.90 5.68
5491 6079 1.597027 CGAGACACCAAAGGGCGTT 60.597 57.895 0.00 0.00 37.90 4.84
5532 6126 5.336690 GGCCTTTGCATCTTTAAACTGATGA 60.337 40.000 17.29 0.07 41.69 2.92
5541 6135 9.034544 GCATCTTTAAACTGATGAAAACAAAGT 57.965 29.630 17.29 0.00 41.69 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 0.679505 GCCGCCTCCCTTTTCTTTTT 59.320 50.000 0.00 0.00 0.00 1.94
10 11 0.469144 TGCCGCCTCCCTTTTCTTTT 60.469 50.000 0.00 0.00 0.00 2.27
11 12 0.895559 CTGCCGCCTCCCTTTTCTTT 60.896 55.000 0.00 0.00 0.00 2.52
12 13 1.303643 CTGCCGCCTCCCTTTTCTT 60.304 57.895 0.00 0.00 0.00 2.52
13 14 2.224159 TCTGCCGCCTCCCTTTTCT 61.224 57.895 0.00 0.00 0.00 2.52
14 15 2.041115 GTCTGCCGCCTCCCTTTTC 61.041 63.158 0.00 0.00 0.00 2.29
15 16 2.034221 GTCTGCCGCCTCCCTTTT 59.966 61.111 0.00 0.00 0.00 2.27
16 17 2.606587 ATGTCTGCCGCCTCCCTTT 61.607 57.895 0.00 0.00 0.00 3.11
17 18 3.011517 ATGTCTGCCGCCTCCCTT 61.012 61.111 0.00 0.00 0.00 3.95
18 19 3.790437 CATGTCTGCCGCCTCCCT 61.790 66.667 0.00 0.00 0.00 4.20
19 20 3.785859 TCATGTCTGCCGCCTCCC 61.786 66.667 0.00 0.00 0.00 4.30
20 21 2.512515 GTCATGTCTGCCGCCTCC 60.513 66.667 0.00 0.00 0.00 4.30
21 22 2.512515 GGTCATGTCTGCCGCCTC 60.513 66.667 0.00 0.00 0.00 4.70
22 23 4.457496 CGGTCATGTCTGCCGCCT 62.457 66.667 7.53 0.00 36.03 5.52
25 26 4.758251 TGCCGGTCATGTCTGCCG 62.758 66.667 1.90 11.61 39.92 5.69
26 27 2.821366 CTGCCGGTCATGTCTGCC 60.821 66.667 1.90 0.00 0.00 4.85
27 28 2.046892 ACTGCCGGTCATGTCTGC 60.047 61.111 1.90 0.00 0.00 4.26
28 29 4.192000 GACTGCCGGTCATGTCTG 57.808 61.111 1.90 0.00 43.94 3.51
41 42 3.485431 CAGCTTCGCGCCTGACTG 61.485 66.667 13.60 0.70 40.39 3.51
42 43 3.521529 AACAGCTTCGCGCCTGACT 62.522 57.895 22.03 10.00 40.39 3.41
43 44 3.044305 AACAGCTTCGCGCCTGAC 61.044 61.111 22.03 0.00 40.39 3.51
44 45 3.043713 CAACAGCTTCGCGCCTGA 61.044 61.111 22.03 0.00 40.39 3.86
45 46 2.770587 GAACAACAGCTTCGCGCCTG 62.771 60.000 16.17 16.17 40.39 4.85
46 47 2.591715 AACAACAGCTTCGCGCCT 60.592 55.556 0.00 0.00 40.39 5.52
47 48 2.127232 GAACAACAGCTTCGCGCC 60.127 61.111 0.00 0.00 40.39 6.53
48 49 2.497628 CGAACAACAGCTTCGCGC 60.498 61.111 0.00 0.00 34.59 6.86
51 52 2.170985 CGGCGAACAACAGCTTCG 59.829 61.111 0.00 0.35 42.78 3.79
52 53 2.556287 CCGGCGAACAACAGCTTC 59.444 61.111 9.30 0.00 0.00 3.86
53 54 2.978010 CCCGGCGAACAACAGCTT 60.978 61.111 9.30 0.00 0.00 3.74
69 70 2.677848 GCCTCCACTTTCTCCCCC 59.322 66.667 0.00 0.00 0.00 5.40
70 71 2.269241 CGCCTCCACTTTCTCCCC 59.731 66.667 0.00 0.00 0.00 4.81
71 72 2.436824 GCGCCTCCACTTTCTCCC 60.437 66.667 0.00 0.00 0.00 4.30
72 73 1.743252 CTGCGCCTCCACTTTCTCC 60.743 63.158 4.18 0.00 0.00 3.71
73 74 2.394563 GCTGCGCCTCCACTTTCTC 61.395 63.158 4.18 0.00 0.00 2.87
74 75 2.359230 GCTGCGCCTCCACTTTCT 60.359 61.111 4.18 0.00 0.00 2.52
75 76 3.793144 CGCTGCGCCTCCACTTTC 61.793 66.667 9.88 0.00 0.00 2.62
122 123 2.830370 CCCTTTGCGGCCATCTCC 60.830 66.667 2.24 0.00 0.00 3.71
123 124 3.521796 GCCCTTTGCGGCCATCTC 61.522 66.667 2.24 0.00 43.66 2.75
163 164 2.186125 CTTCCTTACCCCGGCGAC 59.814 66.667 9.30 0.00 0.00 5.19
164 165 3.777910 GCTTCCTTACCCCGGCGA 61.778 66.667 9.30 0.00 0.00 5.54
165 166 4.090588 TGCTTCCTTACCCCGGCG 62.091 66.667 0.00 0.00 0.00 6.46
166 167 2.124695 CTGCTTCCTTACCCCGGC 60.125 66.667 0.00 0.00 0.00 6.13
167 168 1.522569 CTCTGCTTCCTTACCCCGG 59.477 63.158 0.00 0.00 0.00 5.73
168 169 1.522569 CCTCTGCTTCCTTACCCCG 59.477 63.158 0.00 0.00 0.00 5.73
169 170 1.224870 GCCTCTGCTTCCTTACCCC 59.775 63.158 0.00 0.00 33.53 4.95
170 171 1.153349 CGCCTCTGCTTCCTTACCC 60.153 63.158 0.00 0.00 34.43 3.69
171 172 0.822164 TACGCCTCTGCTTCCTTACC 59.178 55.000 0.00 0.00 34.43 2.85
172 173 1.803252 GCTACGCCTCTGCTTCCTTAC 60.803 57.143 0.00 0.00 34.43 2.34
173 174 0.460311 GCTACGCCTCTGCTTCCTTA 59.540 55.000 0.00 0.00 34.43 2.69
174 175 1.219393 GCTACGCCTCTGCTTCCTT 59.781 57.895 0.00 0.00 34.43 3.36
175 176 2.726351 GGCTACGCCTCTGCTTCCT 61.726 63.158 0.00 0.00 46.69 3.36
176 177 2.202946 GGCTACGCCTCTGCTTCC 60.203 66.667 0.00 0.00 46.69 3.46
196 197 3.760035 TCGCTCAGGAACTCCCGC 61.760 66.667 0.00 0.00 40.87 6.13
197 198 2.182030 GTCGCTCAGGAACTCCCG 59.818 66.667 0.00 0.00 40.87 5.14
198 199 2.182030 CGTCGCTCAGGAACTCCC 59.818 66.667 0.00 0.00 34.60 4.30
199 200 2.507324 GCGTCGCTCAGGAACTCC 60.507 66.667 10.68 0.00 34.60 3.85
200 201 1.803519 CTGCGTCGCTCAGGAACTC 60.804 63.158 19.50 0.00 34.60 3.01
201 202 2.259818 CTGCGTCGCTCAGGAACT 59.740 61.111 19.50 0.00 43.88 3.01
216 217 4.864334 GGCCATCTCCGCCACCTG 62.864 72.222 0.00 0.00 46.27 4.00
251 252 4.054455 CGTTTGTCGTCCGTGCCG 62.054 66.667 0.00 0.00 34.52 5.69
252 253 4.364409 GCGTTTGTCGTCCGTGCC 62.364 66.667 0.00 0.00 42.13 5.01
253 254 4.364409 GGCGTTTGTCGTCCGTGC 62.364 66.667 0.00 0.00 42.13 5.34
254 255 2.938823 CTGGCGTTTGTCGTCCGTG 61.939 63.158 0.00 0.00 44.19 4.94
255 256 2.660552 CTGGCGTTTGTCGTCCGT 60.661 61.111 0.00 0.00 44.19 4.69
256 257 4.072088 GCTGGCGTTTGTCGTCCG 62.072 66.667 0.00 0.00 44.19 4.79
257 258 4.072088 CGCTGGCGTTTGTCGTCC 62.072 66.667 6.83 0.00 44.19 4.79
258 259 4.072088 CCGCTGGCGTTTGTCGTC 62.072 66.667 13.84 0.00 45.13 4.20
259 260 4.903010 ACCGCTGGCGTTTGTCGT 62.903 61.111 13.84 0.73 42.13 4.34
260 261 4.368808 CACCGCTGGCGTTTGTCG 62.369 66.667 13.84 0.12 43.12 4.35
261 262 4.025401 CCACCGCTGGCGTTTGTC 62.025 66.667 13.84 0.00 37.81 3.18
321 322 3.343788 AAAGAGAGAGTCCCGCGCG 62.344 63.158 25.67 25.67 0.00 6.86
322 323 1.807573 CAAAGAGAGAGTCCCGCGC 60.808 63.158 0.00 0.00 0.00 6.86
323 324 0.734253 CACAAAGAGAGAGTCCCGCG 60.734 60.000 0.00 0.00 0.00 6.46
324 325 0.603569 TCACAAAGAGAGAGTCCCGC 59.396 55.000 0.00 0.00 0.00 6.13
335 336 1.436195 GCCACACACGCTCACAAAGA 61.436 55.000 0.00 0.00 0.00 2.52
336 337 1.009675 GCCACACACGCTCACAAAG 60.010 57.895 0.00 0.00 0.00 2.77
337 338 2.818487 CGCCACACACGCTCACAAA 61.818 57.895 0.00 0.00 0.00 2.83
338 339 3.268603 CGCCACACACGCTCACAA 61.269 61.111 0.00 0.00 0.00 3.33
355 356 4.883354 CTCCCAATCCCCAGCGCC 62.883 72.222 2.29 0.00 0.00 6.53
356 357 4.883354 CCTCCCAATCCCCAGCGC 62.883 72.222 0.00 0.00 0.00 5.92
357 358 1.127567 TATCCTCCCAATCCCCAGCG 61.128 60.000 0.00 0.00 0.00 5.18
358 359 1.376649 ATATCCTCCCAATCCCCAGC 58.623 55.000 0.00 0.00 0.00 4.85
359 360 3.118531 CCTATATCCTCCCAATCCCCAG 58.881 54.545 0.00 0.00 0.00 4.45
360 361 2.738758 TCCTATATCCTCCCAATCCCCA 59.261 50.000 0.00 0.00 0.00 4.96
361 362 3.508952 TCCTATATCCTCCCAATCCCC 57.491 52.381 0.00 0.00 0.00 4.81
362 363 3.643792 CGATCCTATATCCTCCCAATCCC 59.356 52.174 0.00 0.00 0.00 3.85
363 364 4.547671 TCGATCCTATATCCTCCCAATCC 58.452 47.826 0.00 0.00 0.00 3.01
364 365 4.586841 CCTCGATCCTATATCCTCCCAATC 59.413 50.000 0.00 0.00 0.00 2.67
365 366 4.551671 CCTCGATCCTATATCCTCCCAAT 58.448 47.826 0.00 0.00 0.00 3.16
366 367 3.309921 CCCTCGATCCTATATCCTCCCAA 60.310 52.174 0.00 0.00 0.00 4.12
367 368 2.245028 CCCTCGATCCTATATCCTCCCA 59.755 54.545 0.00 0.00 0.00 4.37
368 369 2.514582 TCCCTCGATCCTATATCCTCCC 59.485 54.545 0.00 0.00 0.00 4.30
369 370 3.955524 TCCCTCGATCCTATATCCTCC 57.044 52.381 0.00 0.00 0.00 4.30
383 384 3.374402 CCGATCCCCGATCCCTCG 61.374 72.222 0.00 0.00 44.62 4.63
384 385 1.119574 TTTCCGATCCCCGATCCCTC 61.120 60.000 0.00 0.00 41.76 4.30
385 386 0.473886 ATTTCCGATCCCCGATCCCT 60.474 55.000 0.00 0.00 41.76 4.20
386 387 1.207329 CTATTTCCGATCCCCGATCCC 59.793 57.143 0.00 0.00 41.76 3.85
387 388 1.207329 CCTATTTCCGATCCCCGATCC 59.793 57.143 0.00 0.00 41.76 3.36
388 389 1.207329 CCCTATTTCCGATCCCCGATC 59.793 57.143 0.00 0.00 41.76 3.69
389 390 1.276622 CCCTATTTCCGATCCCCGAT 58.723 55.000 0.00 0.00 41.76 4.18
390 391 0.105349 ACCCTATTTCCGATCCCCGA 60.105 55.000 0.00 0.00 41.76 5.14
391 392 0.763035 AACCCTATTTCCGATCCCCG 59.237 55.000 0.00 0.00 38.18 5.73
392 393 3.308035 AAAACCCTATTTCCGATCCCC 57.692 47.619 0.00 0.00 0.00 4.81
393 394 4.141321 ACCTAAAACCCTATTTCCGATCCC 60.141 45.833 0.00 0.00 0.00 3.85
394 395 5.045012 ACCTAAAACCCTATTTCCGATCC 57.955 43.478 0.00 0.00 0.00 3.36
395 396 6.679638 GCAAACCTAAAACCCTATTTCCGATC 60.680 42.308 0.00 0.00 0.00 3.69
396 397 5.126545 GCAAACCTAAAACCCTATTTCCGAT 59.873 40.000 0.00 0.00 0.00 4.18
397 398 4.460034 GCAAACCTAAAACCCTATTTCCGA 59.540 41.667 0.00 0.00 0.00 4.55
398 399 4.381185 GGCAAACCTAAAACCCTATTTCCG 60.381 45.833 0.00 0.00 0.00 4.30
399 400 4.081309 GGGCAAACCTAAAACCCTATTTCC 60.081 45.833 0.00 0.00 37.59 3.13
400 401 5.080969 GGGCAAACCTAAAACCCTATTTC 57.919 43.478 0.00 0.00 37.59 2.17
439 440 1.127343 TTGGGAAAAAGGCCAACTGG 58.873 50.000 5.01 0.00 38.53 4.00
440 441 2.998316 TTTGGGAAAAAGGCCAACTG 57.002 45.000 5.01 0.00 0.00 3.16
441 442 3.716353 AGAATTTGGGAAAAAGGCCAACT 59.284 39.130 5.01 0.00 0.00 3.16
442 443 4.065088 GAGAATTTGGGAAAAAGGCCAAC 58.935 43.478 5.01 0.00 0.00 3.77
443 444 3.973305 AGAGAATTTGGGAAAAAGGCCAA 59.027 39.130 5.01 0.00 0.00 4.52
444 445 3.578282 GAGAGAATTTGGGAAAAAGGCCA 59.422 43.478 5.01 0.00 0.00 5.36
445 446 3.834813 AGAGAGAATTTGGGAAAAAGGCC 59.165 43.478 0.00 0.00 0.00 5.19
446 447 4.769488 AGAGAGAGAATTTGGGAAAAAGGC 59.231 41.667 0.00 0.00 0.00 4.35
447 448 6.266330 ACAAGAGAGAGAATTTGGGAAAAAGG 59.734 38.462 0.00 0.00 0.00 3.11
448 449 7.013655 TGACAAGAGAGAGAATTTGGGAAAAAG 59.986 37.037 0.00 0.00 0.00 2.27
449 450 6.833416 TGACAAGAGAGAGAATTTGGGAAAAA 59.167 34.615 0.00 0.00 0.00 1.94
450 451 6.364701 TGACAAGAGAGAGAATTTGGGAAAA 58.635 36.000 0.00 0.00 0.00 2.29
451 452 5.940617 TGACAAGAGAGAGAATTTGGGAAA 58.059 37.500 0.00 0.00 0.00 3.13
452 453 5.567037 TGACAAGAGAGAGAATTTGGGAA 57.433 39.130 0.00 0.00 0.00 3.97
453 454 5.768980 ATGACAAGAGAGAGAATTTGGGA 57.231 39.130 0.00 0.00 0.00 4.37
454 455 6.881065 TGTAATGACAAGAGAGAGAATTTGGG 59.119 38.462 0.00 0.00 30.68 4.12
455 456 7.912056 TGTAATGACAAGAGAGAGAATTTGG 57.088 36.000 0.00 0.00 30.68 3.28
465 466 9.832445 GGTCCTAATTTATGTAATGACAAGAGA 57.168 33.333 0.00 0.00 39.59 3.10
466 467 9.057089 GGGTCCTAATTTATGTAATGACAAGAG 57.943 37.037 0.00 0.00 39.59 2.85
467 468 7.996644 GGGGTCCTAATTTATGTAATGACAAGA 59.003 37.037 0.00 0.00 39.59 3.02
468 469 7.998964 AGGGGTCCTAATTTATGTAATGACAAG 59.001 37.037 0.00 0.00 32.99 3.16
469 470 7.878495 AGGGGTCCTAATTTATGTAATGACAA 58.122 34.615 0.00 0.00 32.99 3.18
470 471 7.128109 TGAGGGGTCCTAATTTATGTAATGACA 59.872 37.037 0.00 0.00 34.96 3.58
471 472 7.514721 TGAGGGGTCCTAATTTATGTAATGAC 58.485 38.462 0.00 0.00 31.76 3.06
472 473 7.699709 TGAGGGGTCCTAATTTATGTAATGA 57.300 36.000 0.00 0.00 31.76 2.57
473 474 8.760980 TTTGAGGGGTCCTAATTTATGTAATG 57.239 34.615 0.00 0.00 31.76 1.90
474 475 9.777008 TTTTTGAGGGGTCCTAATTTATGTAAT 57.223 29.630 0.00 0.00 31.76 1.89
506 507 9.354673 TCATCACTGTCTCTTTTCCTAATTTTT 57.645 29.630 0.00 0.00 0.00 1.94
507 508 8.924511 TCATCACTGTCTCTTTTCCTAATTTT 57.075 30.769 0.00 0.00 0.00 1.82
508 509 8.924511 TTCATCACTGTCTCTTTTCCTAATTT 57.075 30.769 0.00 0.00 0.00 1.82
509 510 8.924511 TTTCATCACTGTCTCTTTTCCTAATT 57.075 30.769 0.00 0.00 0.00 1.40
510 511 8.924511 TTTTCATCACTGTCTCTTTTCCTAAT 57.075 30.769 0.00 0.00 0.00 1.73
511 512 8.746052 TTTTTCATCACTGTCTCTTTTCCTAA 57.254 30.769 0.00 0.00 0.00 2.69
533 534 8.519799 TGCAACCTAGCTAGCTATTTATTTTT 57.480 30.769 24.36 7.61 34.99 1.94
534 535 8.519799 TTGCAACCTAGCTAGCTATTTATTTT 57.480 30.769 24.36 8.87 34.99 1.82
535 536 7.229506 CCTTGCAACCTAGCTAGCTATTTATTT 59.770 37.037 24.36 10.45 36.29 1.40
536 537 6.712547 CCTTGCAACCTAGCTAGCTATTTATT 59.287 38.462 24.36 13.11 36.29 1.40
537 538 6.043243 TCCTTGCAACCTAGCTAGCTATTTAT 59.957 38.462 24.36 8.97 36.29 1.40
538 539 5.365605 TCCTTGCAACCTAGCTAGCTATTTA 59.634 40.000 24.36 4.75 36.29 1.40
539 540 4.164221 TCCTTGCAACCTAGCTAGCTATTT 59.836 41.667 24.36 16.99 36.29 1.40
540 541 3.711704 TCCTTGCAACCTAGCTAGCTATT 59.288 43.478 24.36 14.20 36.29 1.73
541 542 3.309296 TCCTTGCAACCTAGCTAGCTAT 58.691 45.455 24.36 8.50 36.29 2.97
542 543 2.747177 TCCTTGCAACCTAGCTAGCTA 58.253 47.619 22.85 22.85 36.29 3.32
543 544 1.573108 TCCTTGCAACCTAGCTAGCT 58.427 50.000 23.12 23.12 36.29 3.32
544 545 2.403252 TTCCTTGCAACCTAGCTAGC 57.597 50.000 15.74 6.62 36.29 3.42
545 546 5.904362 ATTTTTCCTTGCAACCTAGCTAG 57.096 39.130 14.20 14.20 37.16 3.42
546 547 7.116075 TCATATTTTTCCTTGCAACCTAGCTA 58.884 34.615 0.00 0.00 34.99 3.32
547 548 5.951747 TCATATTTTTCCTTGCAACCTAGCT 59.048 36.000 0.00 0.00 34.99 3.32
548 549 6.207691 TCATATTTTTCCTTGCAACCTAGC 57.792 37.500 0.00 0.00 0.00 3.42
549 550 8.306761 AGTTTCATATTTTTCCTTGCAACCTAG 58.693 33.333 0.00 0.00 0.00 3.02
550 551 8.189119 AGTTTCATATTTTTCCTTGCAACCTA 57.811 30.769 0.00 0.00 0.00 3.08
551 552 7.066307 AGTTTCATATTTTTCCTTGCAACCT 57.934 32.000 0.00 0.00 0.00 3.50
552 553 7.728847 AAGTTTCATATTTTTCCTTGCAACC 57.271 32.000 0.00 0.00 0.00 3.77
553 554 9.650371 GAAAAGTTTCATATTTTTCCTTGCAAC 57.350 29.630 0.00 0.00 35.71 4.17
561 562 7.359181 CGCCACAGGAAAAGTTTCATATTTTTC 60.359 37.037 6.15 2.29 38.92 2.29
562 563 6.423604 CGCCACAGGAAAAGTTTCATATTTTT 59.576 34.615 6.15 0.00 38.92 1.94
563 564 5.925969 CGCCACAGGAAAAGTTTCATATTTT 59.074 36.000 6.15 0.00 38.92 1.82
564 565 5.010617 ACGCCACAGGAAAAGTTTCATATTT 59.989 36.000 6.15 0.00 38.92 1.40
565 566 4.522789 ACGCCACAGGAAAAGTTTCATATT 59.477 37.500 6.15 0.00 38.92 1.28
566 567 4.079253 ACGCCACAGGAAAAGTTTCATAT 58.921 39.130 6.15 0.00 38.92 1.78
567 568 3.252215 CACGCCACAGGAAAAGTTTCATA 59.748 43.478 6.15 0.00 38.92 2.15
568 569 2.034558 CACGCCACAGGAAAAGTTTCAT 59.965 45.455 6.15 0.00 38.92 2.57
569 570 1.403679 CACGCCACAGGAAAAGTTTCA 59.596 47.619 6.15 0.00 38.92 2.69
570 571 1.864029 GCACGCCACAGGAAAAGTTTC 60.864 52.381 0.00 0.00 36.46 2.78
571 572 0.102300 GCACGCCACAGGAAAAGTTT 59.898 50.000 0.00 0.00 0.00 2.66
572 573 1.034838 TGCACGCCACAGGAAAAGTT 61.035 50.000 0.00 0.00 0.00 2.66
573 574 0.823356 ATGCACGCCACAGGAAAAGT 60.823 50.000 0.00 0.00 0.00 2.66
574 575 0.387622 CATGCACGCCACAGGAAAAG 60.388 55.000 0.00 0.00 0.00 2.27
575 576 1.106351 ACATGCACGCCACAGGAAAA 61.106 50.000 0.00 0.00 0.00 2.29
576 577 1.514678 GACATGCACGCCACAGGAAA 61.515 55.000 0.00 0.00 0.00 3.13
577 578 1.965930 GACATGCACGCCACAGGAA 60.966 57.895 0.00 0.00 0.00 3.36
578 579 2.358615 GACATGCACGCCACAGGA 60.359 61.111 0.00 0.00 0.00 3.86
579 580 3.434319 GGACATGCACGCCACAGG 61.434 66.667 0.00 0.00 0.00 4.00
580 581 2.669229 TGGACATGCACGCCACAG 60.669 61.111 0.00 0.00 0.00 3.66
583 584 1.387295 TTTTGTGGACATGCACGCCA 61.387 50.000 0.00 0.00 0.00 5.69
584 585 0.664166 CTTTTGTGGACATGCACGCC 60.664 55.000 0.00 0.00 0.00 5.68
585 586 0.310543 TCTTTTGTGGACATGCACGC 59.689 50.000 0.00 0.00 0.00 5.34
586 587 2.033299 ACTTCTTTTGTGGACATGCACG 59.967 45.455 0.00 0.00 0.00 5.34
587 588 3.715628 ACTTCTTTTGTGGACATGCAC 57.284 42.857 0.00 0.00 0.00 4.57
588 589 3.068024 GGAACTTCTTTTGTGGACATGCA 59.932 43.478 0.00 0.00 0.00 3.96
589 590 3.068024 TGGAACTTCTTTTGTGGACATGC 59.932 43.478 0.00 0.00 0.00 4.06
590 591 4.499696 GGTGGAACTTCTTTTGTGGACATG 60.500 45.833 0.00 0.00 36.74 3.21
591 592 3.636764 GGTGGAACTTCTTTTGTGGACAT 59.363 43.478 0.00 0.00 36.74 3.06
592 593 3.020984 GGTGGAACTTCTTTTGTGGACA 58.979 45.455 0.00 0.00 36.74 4.02
593 594 3.020984 TGGTGGAACTTCTTTTGTGGAC 58.979 45.455 0.00 0.00 36.74 4.02
594 595 3.374042 TGGTGGAACTTCTTTTGTGGA 57.626 42.857 0.00 0.00 36.74 4.02
595 596 4.464069 TTTGGTGGAACTTCTTTTGTGG 57.536 40.909 0.00 0.00 36.74 4.17
596 597 6.983474 AATTTTGGTGGAACTTCTTTTGTG 57.017 33.333 0.00 0.00 36.74 3.33
597 598 6.128035 GCAAATTTTGGTGGAACTTCTTTTGT 60.128 34.615 10.96 0.00 36.74 2.83
598 599 6.128063 TGCAAATTTTGGTGGAACTTCTTTTG 60.128 34.615 10.96 0.00 36.74 2.44
599 600 5.942826 TGCAAATTTTGGTGGAACTTCTTTT 59.057 32.000 10.96 0.00 36.74 2.27
600 601 5.495640 TGCAAATTTTGGTGGAACTTCTTT 58.504 33.333 10.96 0.00 36.74 2.52
601 602 5.096443 TGCAAATTTTGGTGGAACTTCTT 57.904 34.783 10.96 0.00 36.74 2.52
602 603 4.405358 TCTGCAAATTTTGGTGGAACTTCT 59.595 37.500 10.96 0.00 36.74 2.85
603 604 4.692228 TCTGCAAATTTTGGTGGAACTTC 58.308 39.130 10.96 0.00 36.74 3.01
604 605 4.751767 TCTGCAAATTTTGGTGGAACTT 57.248 36.364 10.96 0.00 36.74 2.66
605 606 4.751767 TTCTGCAAATTTTGGTGGAACT 57.248 36.364 10.96 0.00 36.74 3.01
606 607 6.375945 AAATTCTGCAAATTTTGGTGGAAC 57.624 33.333 10.96 0.00 0.00 3.62
607 608 6.793349 CAAAATTCTGCAAATTTTGGTGGAA 58.207 32.000 28.92 12.96 46.15 3.53
608 609 6.374565 CAAAATTCTGCAAATTTTGGTGGA 57.625 33.333 28.92 6.45 46.15 4.02
614 615 9.926158 AACTTTTTCCAAAATTCTGCAAATTTT 57.074 22.222 18.45 18.45 39.60 1.82
615 616 9.926158 AAACTTTTTCCAAAATTCTGCAAATTT 57.074 22.222 11.43 11.43 0.00 1.82
616 617 9.926158 AAAACTTTTTCCAAAATTCTGCAAATT 57.074 22.222 0.00 0.00 0.00 1.82
617 618 9.356433 CAAAACTTTTTCCAAAATTCTGCAAAT 57.644 25.926 0.00 0.00 0.00 2.32
618 619 7.811713 CCAAAACTTTTTCCAAAATTCTGCAAA 59.188 29.630 0.00 0.00 0.00 3.68
619 620 7.311408 CCAAAACTTTTTCCAAAATTCTGCAA 58.689 30.769 0.00 0.00 0.00 4.08
620 621 6.127786 CCCAAAACTTTTTCCAAAATTCTGCA 60.128 34.615 0.00 0.00 0.00 4.41
621 622 6.264832 CCCAAAACTTTTTCCAAAATTCTGC 58.735 36.000 0.00 0.00 0.00 4.26
622 623 6.183360 CCCCCAAAACTTTTTCCAAAATTCTG 60.183 38.462 0.00 0.00 0.00 3.02
623 624 5.890985 CCCCCAAAACTTTTTCCAAAATTCT 59.109 36.000 0.00 0.00 0.00 2.40
624 625 5.451242 GCCCCCAAAACTTTTTCCAAAATTC 60.451 40.000 0.00 0.00 0.00 2.17
625 626 4.404073 GCCCCCAAAACTTTTTCCAAAATT 59.596 37.500 0.00 0.00 0.00 1.82
626 627 3.957497 GCCCCCAAAACTTTTTCCAAAAT 59.043 39.130 0.00 0.00 0.00 1.82
627 628 3.357203 GCCCCCAAAACTTTTTCCAAAA 58.643 40.909 0.00 0.00 0.00 2.44
628 629 2.357257 GGCCCCCAAAACTTTTTCCAAA 60.357 45.455 0.00 0.00 0.00 3.28
629 630 1.213182 GGCCCCCAAAACTTTTTCCAA 59.787 47.619 0.00 0.00 0.00 3.53
630 631 0.840617 GGCCCCCAAAACTTTTTCCA 59.159 50.000 0.00 0.00 0.00 3.53
631 632 0.840617 TGGCCCCCAAAACTTTTTCC 59.159 50.000 0.00 0.00 0.00 3.13
632 633 2.719531 TTGGCCCCCAAAACTTTTTC 57.280 45.000 0.00 0.00 40.92 2.29
641 642 1.501604 AGTTAGAAGTTTGGCCCCCAA 59.498 47.619 0.00 0.00 42.29 4.12
642 643 1.154430 AGTTAGAAGTTTGGCCCCCA 58.846 50.000 0.00 0.00 0.00 4.96
643 644 1.074889 TCAGTTAGAAGTTTGGCCCCC 59.925 52.381 0.00 0.00 0.00 5.40
644 645 2.579410 TCAGTTAGAAGTTTGGCCCC 57.421 50.000 0.00 0.00 0.00 5.80
645 646 4.617959 GTTTTCAGTTAGAAGTTTGGCCC 58.382 43.478 0.00 0.00 37.57 5.80
646 647 4.287720 CGTTTTCAGTTAGAAGTTTGGCC 58.712 43.478 0.00 0.00 37.57 5.36
647 648 4.287720 CCGTTTTCAGTTAGAAGTTTGGC 58.712 43.478 0.00 0.00 37.57 4.52
648 649 4.791734 GCCCGTTTTCAGTTAGAAGTTTGG 60.792 45.833 0.00 0.00 37.57 3.28
649 650 4.287720 GCCCGTTTTCAGTTAGAAGTTTG 58.712 43.478 0.00 0.00 37.57 2.93
650 651 3.317149 GGCCCGTTTTCAGTTAGAAGTTT 59.683 43.478 0.00 0.00 37.57 2.66
651 652 2.882761 GGCCCGTTTTCAGTTAGAAGTT 59.117 45.455 0.00 0.00 37.57 2.66
652 653 2.501261 GGCCCGTTTTCAGTTAGAAGT 58.499 47.619 0.00 0.00 37.57 3.01
653 654 1.810755 GGGCCCGTTTTCAGTTAGAAG 59.189 52.381 5.69 0.00 37.57 2.85
654 655 1.143277 TGGGCCCGTTTTCAGTTAGAA 59.857 47.619 19.37 0.00 0.00 2.10
655 656 0.766131 TGGGCCCGTTTTCAGTTAGA 59.234 50.000 19.37 0.00 0.00 2.10
656 657 1.472480 CATGGGCCCGTTTTCAGTTAG 59.528 52.381 16.04 0.00 0.00 2.34
657 658 1.202952 ACATGGGCCCGTTTTCAGTTA 60.203 47.619 16.04 0.00 0.00 2.24
658 659 0.469144 ACATGGGCCCGTTTTCAGTT 60.469 50.000 16.04 0.00 0.00 3.16
659 660 0.893727 GACATGGGCCCGTTTTCAGT 60.894 55.000 16.04 8.99 0.00 3.41
660 661 1.595093 GGACATGGGCCCGTTTTCAG 61.595 60.000 16.04 5.05 0.00 3.02
661 662 1.605165 GGACATGGGCCCGTTTTCA 60.605 57.895 16.04 0.00 0.00 2.69
662 663 0.034863 TAGGACATGGGCCCGTTTTC 60.035 55.000 16.04 13.87 0.00 2.29
663 664 0.034477 CTAGGACATGGGCCCGTTTT 60.034 55.000 16.04 3.65 0.00 2.43
664 665 1.205460 ACTAGGACATGGGCCCGTTT 61.205 55.000 16.04 8.52 0.00 3.60
665 666 1.615424 ACTAGGACATGGGCCCGTT 60.615 57.895 16.04 6.02 0.00 4.44
666 667 2.040606 ACTAGGACATGGGCCCGT 59.959 61.111 19.37 15.91 0.00 5.28
667 668 2.505982 CACTAGGACATGGGCCCG 59.494 66.667 19.37 6.14 0.00 6.13
668 669 2.919043 CCACTAGGACATGGGCCC 59.081 66.667 17.59 17.59 36.89 5.80
692 693 4.965283 TCATCCCCTTCCCACTATTTTT 57.035 40.909 0.00 0.00 0.00 1.94
693 694 4.387891 CCATCATCCCCTTCCCACTATTTT 60.388 45.833 0.00 0.00 0.00 1.82
694 695 3.140895 CCATCATCCCCTTCCCACTATTT 59.859 47.826 0.00 0.00 0.00 1.40
695 696 2.718609 CCATCATCCCCTTCCCACTATT 59.281 50.000 0.00 0.00 0.00 1.73
696 697 2.352371 CCATCATCCCCTTCCCACTAT 58.648 52.381 0.00 0.00 0.00 2.12
697 698 1.698928 CCCATCATCCCCTTCCCACTA 60.699 57.143 0.00 0.00 0.00 2.74
698 699 0.995675 CCCATCATCCCCTTCCCACT 60.996 60.000 0.00 0.00 0.00 4.00
699 700 0.993509 TCCCATCATCCCCTTCCCAC 60.994 60.000 0.00 0.00 0.00 4.61
700 701 0.698886 CTCCCATCATCCCCTTCCCA 60.699 60.000 0.00 0.00 0.00 4.37
701 702 1.430369 CCTCCCATCATCCCCTTCCC 61.430 65.000 0.00 0.00 0.00 3.97
702 703 0.699231 ACCTCCCATCATCCCCTTCC 60.699 60.000 0.00 0.00 0.00 3.46
703 704 2.118403 TACCTCCCATCATCCCCTTC 57.882 55.000 0.00 0.00 0.00 3.46
704 705 2.021042 TCTTACCTCCCATCATCCCCTT 60.021 50.000 0.00 0.00 0.00 3.95
705 706 1.585592 TCTTACCTCCCATCATCCCCT 59.414 52.381 0.00 0.00 0.00 4.79
706 707 1.700186 GTCTTACCTCCCATCATCCCC 59.300 57.143 0.00 0.00 0.00 4.81
707 708 1.344763 CGTCTTACCTCCCATCATCCC 59.655 57.143 0.00 0.00 0.00 3.85
708 709 2.317040 TCGTCTTACCTCCCATCATCC 58.683 52.381 0.00 0.00 0.00 3.51
709 710 4.402056 TTTCGTCTTACCTCCCATCATC 57.598 45.455 0.00 0.00 0.00 2.92
710 711 4.837093 TTTTCGTCTTACCTCCCATCAT 57.163 40.909 0.00 0.00 0.00 2.45
711 712 4.837093 ATTTTCGTCTTACCTCCCATCA 57.163 40.909 0.00 0.00 0.00 3.07
712 713 6.037940 GGTTTATTTTCGTCTTACCTCCCATC 59.962 42.308 0.00 0.00 0.00 3.51
713 714 5.884232 GGTTTATTTTCGTCTTACCTCCCAT 59.116 40.000 0.00 0.00 0.00 4.00
714 715 5.247862 GGTTTATTTTCGTCTTACCTCCCA 58.752 41.667 0.00 0.00 0.00 4.37
715 716 4.330894 CGGTTTATTTTCGTCTTACCTCCC 59.669 45.833 0.00 0.00 0.00 4.30
716 717 4.330894 CCGGTTTATTTTCGTCTTACCTCC 59.669 45.833 0.00 0.00 0.00 4.30
717 718 5.062683 GTCCGGTTTATTTTCGTCTTACCTC 59.937 44.000 0.00 0.00 0.00 3.85
718 719 4.931601 GTCCGGTTTATTTTCGTCTTACCT 59.068 41.667 0.00 0.00 0.00 3.08
719 720 4.690280 TGTCCGGTTTATTTTCGTCTTACC 59.310 41.667 0.00 0.00 0.00 2.85
720 721 5.844301 TGTCCGGTTTATTTTCGTCTTAC 57.156 39.130 0.00 0.00 0.00 2.34
721 722 6.857777 TTTGTCCGGTTTATTTTCGTCTTA 57.142 33.333 0.00 0.00 0.00 2.10
722 723 5.754543 TTTGTCCGGTTTATTTTCGTCTT 57.245 34.783 0.00 0.00 0.00 3.01
723 724 5.754543 TTTTGTCCGGTTTATTTTCGTCT 57.245 34.783 0.00 0.00 0.00 4.18
724 725 6.996562 ATTTTTGTCCGGTTTATTTTCGTC 57.003 33.333 0.00 0.00 0.00 4.20
725 726 8.868635 TTTATTTTTGTCCGGTTTATTTTCGT 57.131 26.923 0.00 0.00 0.00 3.85
726 727 9.570507 GTTTTATTTTTGTCCGGTTTATTTTCG 57.429 29.630 0.00 0.00 0.00 3.46
727 728 9.570507 CGTTTTATTTTTGTCCGGTTTATTTTC 57.429 29.630 0.00 0.00 0.00 2.29
728 729 8.549548 CCGTTTTATTTTTGTCCGGTTTATTTT 58.450 29.630 0.00 0.00 0.00 1.82
729 730 7.924947 TCCGTTTTATTTTTGTCCGGTTTATTT 59.075 29.630 0.00 0.00 35.59 1.40
730 731 7.381948 GTCCGTTTTATTTTTGTCCGGTTTATT 59.618 33.333 0.00 0.00 35.59 1.40
731 732 6.862608 GTCCGTTTTATTTTTGTCCGGTTTAT 59.137 34.615 0.00 0.00 35.59 1.40
732 733 6.205071 GTCCGTTTTATTTTTGTCCGGTTTA 58.795 36.000 0.00 0.00 35.59 2.01
733 734 5.042593 GTCCGTTTTATTTTTGTCCGGTTT 58.957 37.500 0.00 0.00 35.59 3.27
734 735 4.609947 GTCCGTTTTATTTTTGTCCGGTT 58.390 39.130 0.00 0.00 35.59 4.44
735 736 3.303924 CGTCCGTTTTATTTTTGTCCGGT 60.304 43.478 0.00 0.00 35.59 5.28
736 737 3.059051 TCGTCCGTTTTATTTTTGTCCGG 60.059 43.478 0.00 0.00 35.41 5.14
737 738 4.131202 TCGTCCGTTTTATTTTTGTCCG 57.869 40.909 0.00 0.00 0.00 4.79
738 739 6.809297 TTTTCGTCCGTTTTATTTTTGTCC 57.191 33.333 0.00 0.00 0.00 4.02
746 747 9.640974 CGTCATATTTATTTTCGTCCGTTTTAT 57.359 29.630 0.00 0.00 0.00 1.40
747 748 8.867935 TCGTCATATTTATTTTCGTCCGTTTTA 58.132 29.630 0.00 0.00 0.00 1.52
748 749 7.741198 TCGTCATATTTATTTTCGTCCGTTTT 58.259 30.769 0.00 0.00 0.00 2.43
749 750 7.293402 TCGTCATATTTATTTTCGTCCGTTT 57.707 32.000 0.00 0.00 0.00 3.60
750 751 6.890663 TCGTCATATTTATTTTCGTCCGTT 57.109 33.333 0.00 0.00 0.00 4.44
751 752 6.890663 TTCGTCATATTTATTTTCGTCCGT 57.109 33.333 0.00 0.00 0.00 4.69
761 762 9.932207 TCCACGGTTATTATTCGTCATATTTAT 57.068 29.630 0.00 0.00 34.73 1.40
762 763 9.195411 GTCCACGGTTATTATTCGTCATATTTA 57.805 33.333 0.00 0.00 34.73 1.40
763 764 7.095940 CGTCCACGGTTATTATTCGTCATATTT 60.096 37.037 0.00 0.00 34.73 1.40
764 765 6.364165 CGTCCACGGTTATTATTCGTCATATT 59.636 38.462 0.00 0.00 34.73 1.28
765 766 5.860182 CGTCCACGGTTATTATTCGTCATAT 59.140 40.000 0.00 0.00 34.73 1.78
766 767 5.214417 CGTCCACGGTTATTATTCGTCATA 58.786 41.667 0.00 0.00 34.73 2.15
767 768 4.046462 CGTCCACGGTTATTATTCGTCAT 58.954 43.478 0.00 0.00 34.73 3.06
768 769 3.437428 CGTCCACGGTTATTATTCGTCA 58.563 45.455 0.00 0.00 34.73 4.35
769 770 2.217167 GCGTCCACGGTTATTATTCGTC 59.783 50.000 0.55 0.00 40.23 4.20
770 771 2.195922 GCGTCCACGGTTATTATTCGT 58.804 47.619 0.55 0.00 40.23 3.85
771 772 2.195096 TGCGTCCACGGTTATTATTCG 58.805 47.619 0.55 0.00 40.23 3.34
772 773 4.319261 GGATTGCGTCCACGGTTATTATTC 60.319 45.833 0.55 0.00 46.96 1.75
773 774 3.562557 GGATTGCGTCCACGGTTATTATT 59.437 43.478 0.55 0.00 46.96 1.40
774 775 3.135994 GGATTGCGTCCACGGTTATTAT 58.864 45.455 0.55 0.00 46.96 1.28
775 776 2.553086 GGATTGCGTCCACGGTTATTA 58.447 47.619 0.55 0.00 46.96 0.98
776 777 1.375551 GGATTGCGTCCACGGTTATT 58.624 50.000 0.55 0.00 46.96 1.40
777 778 3.074594 GGATTGCGTCCACGGTTAT 57.925 52.632 0.55 0.00 46.96 1.89
778 779 4.602159 GGATTGCGTCCACGGTTA 57.398 55.556 0.55 0.00 46.96 2.85
786 787 2.555199 AGCAGTTGATAGGATTGCGTC 58.445 47.619 0.00 0.00 39.63 5.19
787 788 2.698855 AGCAGTTGATAGGATTGCGT 57.301 45.000 0.00 0.00 39.63 5.24
788 789 5.679734 ATAAAGCAGTTGATAGGATTGCG 57.320 39.130 0.00 0.00 39.63 4.85
789 790 8.383318 TCTAATAAAGCAGTTGATAGGATTGC 57.617 34.615 0.00 0.00 35.09 3.56
801 802 9.974980 GCTTATCTCTACTTCTAATAAAGCAGT 57.025 33.333 0.00 0.00 35.69 4.40
807 808 9.790344 ACCGTAGCTTATCTCTACTTCTAATAA 57.210 33.333 0.00 0.00 35.47 1.40
808 809 9.434420 GACCGTAGCTTATCTCTACTTCTAATA 57.566 37.037 0.00 0.00 35.47 0.98
809 810 8.158789 AGACCGTAGCTTATCTCTACTTCTAAT 58.841 37.037 0.00 0.00 35.47 1.73
810 811 7.507829 AGACCGTAGCTTATCTCTACTTCTAA 58.492 38.462 0.00 0.00 35.47 2.10
811 812 7.065120 AGACCGTAGCTTATCTCTACTTCTA 57.935 40.000 0.00 0.00 35.47 2.10
812 813 5.932455 AGACCGTAGCTTATCTCTACTTCT 58.068 41.667 0.00 0.00 35.47 2.85
813 814 5.107375 CGAGACCGTAGCTTATCTCTACTTC 60.107 48.000 0.00 0.00 36.29 3.01
814 815 4.751098 CGAGACCGTAGCTTATCTCTACTT 59.249 45.833 0.00 0.00 36.29 2.24
815 816 4.309099 CGAGACCGTAGCTTATCTCTACT 58.691 47.826 0.00 0.00 36.29 2.57
816 817 3.120580 GCGAGACCGTAGCTTATCTCTAC 60.121 52.174 0.00 0.00 36.29 2.59
817 818 3.065655 GCGAGACCGTAGCTTATCTCTA 58.934 50.000 0.00 0.00 36.29 2.43
818 819 1.874872 GCGAGACCGTAGCTTATCTCT 59.125 52.381 0.00 0.00 36.29 3.10
819 820 1.398705 CGCGAGACCGTAGCTTATCTC 60.399 57.143 0.00 0.00 38.24 2.75
820 821 0.587285 CGCGAGACCGTAGCTTATCT 59.413 55.000 0.00 0.00 38.24 1.98
821 822 0.997726 GCGCGAGACCGTAGCTTATC 60.998 60.000 12.10 0.00 38.08 1.75
822 823 1.008767 GCGCGAGACCGTAGCTTAT 60.009 57.895 12.10 0.00 38.08 1.73
823 824 2.406401 GCGCGAGACCGTAGCTTA 59.594 61.111 12.10 0.00 38.08 3.09
824 825 4.831307 CGCGCGAGACCGTAGCTT 62.831 66.667 28.94 0.00 38.61 3.74
842 843 4.277672 ACGGAAGCTATGTCTCGCTTATAA 59.722 41.667 0.00 0.00 45.70 0.98
850 851 2.930682 GGAAACACGGAAGCTATGTCTC 59.069 50.000 0.00 0.00 0.00 3.36
876 877 3.545703 AGACTGATTTTATTGGGCCTCG 58.454 45.455 4.53 0.00 0.00 4.63
985 986 2.767445 CCATGGTACGCCGAGACGA 61.767 63.158 2.57 0.00 37.67 4.20
986 987 2.278596 CCATGGTACGCCGAGACG 60.279 66.667 2.57 0.00 37.67 4.18
987 988 2.106332 CCCATGGTACGCCGAGAC 59.894 66.667 11.73 0.00 37.67 3.36
1076 1083 2.669569 CCTCACCACGGGCTTGTG 60.670 66.667 3.85 3.85 39.60 3.33
1098 1105 1.027357 GAGCAGAGCAGAGAGAGAGG 58.973 60.000 0.00 0.00 0.00 3.69
1289 1303 0.704076 TAAACCCAAGCCTGCCTCAT 59.296 50.000 0.00 0.00 0.00 2.90
1461 1491 1.476471 CCATCAGCAAGTGAGATCCCC 60.476 57.143 0.00 0.00 39.07 4.81
1473 1503 5.999205 ACAATTGATTTTACCCATCAGCA 57.001 34.783 13.59 0.00 32.20 4.41
1518 1549 1.056660 GAACCACTCCCCAGTCTCAA 58.943 55.000 0.00 0.00 0.00 3.02
1588 1621 2.028420 AGAGCGCTGATGCATTTGTA 57.972 45.000 18.48 0.00 39.64 2.41
1589 1622 1.135489 CAAGAGCGCTGATGCATTTGT 60.135 47.619 18.48 0.00 39.64 2.83
1594 1627 0.037419 TACACAAGAGCGCTGATGCA 60.037 50.000 18.48 0.00 39.64 3.96
1598 1631 2.833794 ACTTTTACACAAGAGCGCTGA 58.166 42.857 18.48 0.00 0.00 4.26
1599 1632 3.291585 CAACTTTTACACAAGAGCGCTG 58.708 45.455 18.48 3.41 0.00 5.18
1663 1697 3.443099 ACAGAAGAAAGCAACAAAGGC 57.557 42.857 0.00 0.00 0.00 4.35
1700 1734 4.690184 TCATCTGCAACACATCATTGTC 57.310 40.909 0.00 0.00 32.34 3.18
1794 1828 3.196254 TGTCTGGTCCCGAGTATTTAACC 59.804 47.826 0.00 0.00 0.00 2.85
1868 1902 2.672908 CAGCAGGGCAGTGATGGA 59.327 61.111 0.00 0.00 29.89 3.41
1893 1927 2.566833 TGAGCTAACACAGGTGCAAT 57.433 45.000 0.00 0.00 34.30 3.56
1897 1932 6.372659 ACATCTTTATTGAGCTAACACAGGTG 59.627 38.462 0.00 0.00 34.30 4.00
1945 2222 8.749354 ACAGACAGTTTTCCAGAAAGTTAAAAT 58.251 29.630 0.00 0.00 0.00 1.82
1946 2223 8.117813 ACAGACAGTTTTCCAGAAAGTTAAAA 57.882 30.769 0.00 0.00 0.00 1.52
1977 2254 0.255890 GGTAGCAGGGCATCCAAGAA 59.744 55.000 0.00 0.00 34.83 2.52
1993 2270 7.872138 AGGAATTCTATCCAACATCAAAGGTA 58.128 34.615 5.23 0.00 42.27 3.08
2022 2299 0.179000 AGGAACTGCTGATAAGGGCG 59.821 55.000 0.00 0.00 37.18 6.13
2036 2313 4.305989 TCACAAATGAAGCACAAGGAAC 57.694 40.909 0.00 0.00 0.00 3.62
2054 2331 5.627172 TGTAGCTAAAAACGCATCAATCAC 58.373 37.500 0.00 0.00 0.00 3.06
2056 2333 7.189512 AGATTGTAGCTAAAAACGCATCAATC 58.810 34.615 15.07 15.07 42.61 2.67
2057 2334 7.066284 AGAGATTGTAGCTAAAAACGCATCAAT 59.934 33.333 9.70 5.54 36.48 2.57
2059 2336 5.874810 AGAGATTGTAGCTAAAAACGCATCA 59.125 36.000 9.70 0.00 0.00 3.07
2060 2337 6.188175 CAGAGATTGTAGCTAAAAACGCATC 58.812 40.000 9.70 0.00 0.00 3.91
2061 2338 5.447818 GCAGAGATTGTAGCTAAAAACGCAT 60.448 40.000 9.70 0.00 0.00 4.73
2064 2341 5.530519 TGCAGAGATTGTAGCTAAAAACG 57.469 39.130 0.00 0.00 0.00 3.60
2065 2342 8.748380 AAAATGCAGAGATTGTAGCTAAAAAC 57.252 30.769 0.00 0.00 0.00 2.43
2087 2366 7.558444 ACAATAAGAATCCGGGTAAGCATAAAA 59.442 33.333 0.00 0.00 0.00 1.52
2102 2381 5.120830 AGCGACAAGTCACACAATAAGAATC 59.879 40.000 0.72 0.00 0.00 2.52
2409 2702 3.935203 GTGTCTACTGCACAATAGCATGT 59.065 43.478 0.00 0.00 44.68 3.21
2458 2751 4.867047 CCAATAGTATCAGCTTCCTATGCG 59.133 45.833 0.00 0.00 35.28 4.73
2470 2763 4.286032 GTCATGGGGTAGCCAATAGTATCA 59.714 45.833 14.06 0.00 0.00 2.15
2770 3074 6.638096 CAAGTATGCATATTTGACATGGGA 57.362 37.500 28.64 0.00 33.39 4.37
2792 3096 6.603201 CCCCAAATTTCTAGTCTGAATAAGCA 59.397 38.462 0.00 0.00 0.00 3.91
2823 3127 8.619546 ACTTGTGTTAAGTAGTATAGACGGATC 58.380 37.037 0.00 0.00 0.00 3.36
2858 3162 5.098211 GGAAACAATATTCAAGAGTGCAGC 58.902 41.667 0.00 0.00 0.00 5.25
2925 3229 4.081642 TCAATACTCTACCCTGAACTGCAC 60.082 45.833 0.00 0.00 0.00 4.57
2963 3278 7.950512 AGAGACCAGATATTGATGTTCTACAG 58.049 38.462 0.00 0.00 0.00 2.74
2999 3314 4.127171 ACACACAACATGGTAACTGAGAC 58.873 43.478 0.00 0.00 37.61 3.36
3123 3525 7.989741 TGGGAAGAAAATAATGTGCAAAGAAAA 59.010 29.630 0.00 0.00 0.00 2.29
3172 3574 7.986085 TTGACTATGGAAAGGAGAAGAAAAG 57.014 36.000 0.00 0.00 0.00 2.27
3245 3647 1.810959 GCCAAATTTTCTGCATGCCA 58.189 45.000 16.68 2.21 0.00 4.92
3373 3775 0.983467 TCCATTGCAGCCTACAGTCA 59.017 50.000 0.00 0.00 0.00 3.41
3414 3816 3.068024 ACTTTGCTGGCGAATTTTCTTGA 59.932 39.130 0.00 0.00 0.00 3.02
3506 3908 1.543802 AGAGAAGAACAGTCGCTGGAG 59.456 52.381 10.80 0.00 35.51 3.86
3528 3930 1.032114 GCAACCCGAAGCCAGCTATT 61.032 55.000 0.00 0.00 0.00 1.73
3561 3963 4.612932 GCATAAGGCTGAGTTCTTCAAG 57.387 45.455 0.00 0.00 40.25 3.02
3709 4111 0.737219 GCGCAGATTCATCAGGCTTT 59.263 50.000 0.30 0.00 0.00 3.51
3795 4197 7.901029 TCATTGCAGTACCCAAATGAAAATAA 58.099 30.769 10.61 0.00 0.00 1.40
3801 4203 5.999205 ATTTCATTGCAGTACCCAAATGA 57.001 34.783 9.47 9.47 0.00 2.57
4034 4436 6.407202 AGTTTCAAGATTCGGCATAGTAGTT 58.593 36.000 0.00 0.00 0.00 2.24
4163 4565 1.521764 TGCATCATGGGGGTATCAGT 58.478 50.000 0.00 0.00 0.00 3.41
4305 4707 6.127897 GCAGGATGATTAACTTACTTGCAAGT 60.128 38.462 32.97 32.97 39.69 3.16
4368 4773 8.422577 ACCTAAAGATGAAAAGCCAACTTAAT 57.577 30.769 0.00 0.00 34.05 1.40
4373 4778 5.183140 TGCTACCTAAAGATGAAAAGCCAAC 59.817 40.000 0.00 0.00 0.00 3.77
4393 4798 0.253044 GTGCTCCATGGGTTCTGCTA 59.747 55.000 13.02 0.00 0.00 3.49
4415 4820 3.738281 GCGAGGGATCTCTGAAAATCGAA 60.738 47.826 0.00 0.00 37.86 3.71
4785 5192 6.971756 TCACATAAACATCATGCAAAATACCG 59.028 34.615 0.00 0.00 0.00 4.02
4786 5193 8.876275 ATCACATAAACATCATGCAAAATACC 57.124 30.769 0.00 0.00 0.00 2.73
5000 5407 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
5001 5408 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
5002 5409 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
5003 5410 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
5004 5411 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
5005 5412 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
5006 5413 3.930229 TGATGACAAGTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
5007 5414 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
5008 5415 7.273381 CCATTTTGATGACAAGTATTTTCGGAC 59.727 37.037 0.00 0.00 37.32 4.79
5009 5416 7.175816 TCCATTTTGATGACAAGTATTTTCGGA 59.824 33.333 0.00 0.00 37.32 4.55
5010 5417 7.312154 TCCATTTTGATGACAAGTATTTTCGG 58.688 34.615 0.00 0.00 37.32 4.30
5011 5418 8.915871 ATCCATTTTGATGACAAGTATTTTCG 57.084 30.769 0.00 0.00 37.32 3.46
5018 5425 9.918630 CTCTTTTTATCCATTTTGATGACAAGT 57.081 29.630 0.00 0.00 37.32 3.16
5046 5453 9.317936 TCGAGACGTATTTTAGTTCTAGATACA 57.682 33.333 0.00 0.00 0.00 2.29
5050 5457 9.317936 TGTATCGAGACGTATTTTAGTTCTAGA 57.682 33.333 5.61 0.00 0.00 2.43
5053 5460 8.074972 GGATGTATCGAGACGTATTTTAGTTCT 58.925 37.037 4.61 0.00 0.00 3.01
5054 5461 7.325579 GGGATGTATCGAGACGTATTTTAGTTC 59.674 40.741 4.61 0.00 0.00 3.01
5055 5462 7.144000 GGGATGTATCGAGACGTATTTTAGTT 58.856 38.462 4.61 0.00 0.00 2.24
5056 5463 6.294397 GGGGATGTATCGAGACGTATTTTAGT 60.294 42.308 4.61 0.00 0.00 2.24
5057 5464 6.072064 AGGGGATGTATCGAGACGTATTTTAG 60.072 42.308 4.61 0.00 0.00 1.85
5058 5465 5.771666 AGGGGATGTATCGAGACGTATTTTA 59.228 40.000 4.61 0.00 0.00 1.52
5059 5466 4.587684 AGGGGATGTATCGAGACGTATTTT 59.412 41.667 4.61 0.00 0.00 1.82
5060 5467 4.150359 AGGGGATGTATCGAGACGTATTT 58.850 43.478 4.61 0.00 0.00 1.40
5061 5468 3.764218 AGGGGATGTATCGAGACGTATT 58.236 45.455 4.61 0.00 0.00 1.89
5062 5469 3.436577 AGGGGATGTATCGAGACGTAT 57.563 47.619 4.61 0.00 0.00 3.06
5063 5470 2.945080 AGGGGATGTATCGAGACGTA 57.055 50.000 4.61 0.00 0.00 3.57
5064 5471 2.068834 AAGGGGATGTATCGAGACGT 57.931 50.000 4.21 4.21 0.00 4.34
5065 5472 3.454371 AAAAGGGGATGTATCGAGACG 57.546 47.619 5.61 0.00 0.00 4.18
5066 5473 6.522054 TGAATAAAAGGGGATGTATCGAGAC 58.478 40.000 2.50 2.50 0.00 3.36
5067 5474 6.740944 TGAATAAAAGGGGATGTATCGAGA 57.259 37.500 0.00 0.00 0.00 4.04
5068 5475 7.986085 AATGAATAAAAGGGGATGTATCGAG 57.014 36.000 0.00 0.00 0.00 4.04
5069 5476 8.629158 CAAAATGAATAAAAGGGGATGTATCGA 58.371 33.333 0.00 0.00 0.00 3.59
5070 5477 8.629158 TCAAAATGAATAAAAGGGGATGTATCG 58.371 33.333 0.00 0.00 0.00 2.92
5073 5480 9.486123 TCATCAAAATGAATAAAAGGGGATGTA 57.514 29.630 0.00 0.00 38.97 2.29
5074 5481 8.260114 GTCATCAAAATGAATAAAAGGGGATGT 58.740 33.333 0.00 0.00 43.42 3.06
5075 5482 8.259411 TGTCATCAAAATGAATAAAAGGGGATG 58.741 33.333 0.00 0.00 43.42 3.51
5076 5483 8.378115 TGTCATCAAAATGAATAAAAGGGGAT 57.622 30.769 0.00 0.00 43.42 3.85
5077 5484 7.789202 TGTCATCAAAATGAATAAAAGGGGA 57.211 32.000 0.00 0.00 43.42 4.81
5078 5485 8.096414 ACTTGTCATCAAAATGAATAAAAGGGG 58.904 33.333 0.00 0.00 43.42 4.79
5086 5493 7.975616 CCGGAAATACTTGTCATCAAAATGAAT 59.024 33.333 0.00 0.00 43.42 2.57
5087 5494 7.175816 TCCGGAAATACTTGTCATCAAAATGAA 59.824 33.333 0.00 0.00 43.42 2.57
5088 5495 6.657117 TCCGGAAATACTTGTCATCAAAATGA 59.343 34.615 0.00 0.00 39.63 2.57
5089 5496 6.747280 GTCCGGAAATACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
5090 5497 6.403200 CGTCCGGAAATACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
5091 5498 5.106869 CGTCCGGAAATACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
5092 5499 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
5093 5500 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
5094 5501 3.056393 ACGTCCGGAAATACTTGTCATCA 60.056 43.478 5.23 0.00 0.00 3.07
5095 5502 3.518590 ACGTCCGGAAATACTTGTCATC 58.481 45.455 5.23 0.00 0.00 2.92
5096 5503 3.604875 ACGTCCGGAAATACTTGTCAT 57.395 42.857 5.23 0.00 0.00 3.06
5097 5504 3.119388 CCTACGTCCGGAAATACTTGTCA 60.119 47.826 5.23 0.00 0.00 3.58
5098 5505 3.442100 CCTACGTCCGGAAATACTTGTC 58.558 50.000 5.23 0.00 0.00 3.18
5099 5506 2.167075 CCCTACGTCCGGAAATACTTGT 59.833 50.000 5.23 0.00 0.00 3.16
5100 5507 2.428171 TCCCTACGTCCGGAAATACTTG 59.572 50.000 5.23 0.00 0.00 3.16
5101 5508 2.692041 CTCCCTACGTCCGGAAATACTT 59.308 50.000 5.23 0.00 0.00 2.24
5102 5509 2.305009 CTCCCTACGTCCGGAAATACT 58.695 52.381 5.23 0.00 0.00 2.12
5103 5510 2.027385 ACTCCCTACGTCCGGAAATAC 58.973 52.381 5.23 0.00 0.00 1.89
5104 5511 2.442236 ACTCCCTACGTCCGGAAATA 57.558 50.000 5.23 0.00 0.00 1.40
5105 5512 2.442236 TACTCCCTACGTCCGGAAAT 57.558 50.000 5.23 0.00 0.00 2.17
5106 5513 2.026641 CATACTCCCTACGTCCGGAAA 58.973 52.381 5.23 0.00 0.00 3.13
5107 5514 1.212688 TCATACTCCCTACGTCCGGAA 59.787 52.381 5.23 0.00 0.00 4.30
5108 5515 0.839277 TCATACTCCCTACGTCCGGA 59.161 55.000 0.00 0.00 0.00 5.14
5109 5516 1.236628 CTCATACTCCCTACGTCCGG 58.763 60.000 0.00 0.00 0.00 5.14
5110 5517 1.236628 CCTCATACTCCCTACGTCCG 58.763 60.000 0.00 0.00 0.00 4.79
5111 5518 2.361643 ACCTCATACTCCCTACGTCC 57.638 55.000 0.00 0.00 0.00 4.79
5112 5519 2.813172 GCTACCTCATACTCCCTACGTC 59.187 54.545 0.00 0.00 0.00 4.34
5113 5520 2.174210 TGCTACCTCATACTCCCTACGT 59.826 50.000 0.00 0.00 0.00 3.57
5114 5521 2.814919 CTGCTACCTCATACTCCCTACG 59.185 54.545 0.00 0.00 0.00 3.51
5115 5522 3.158676 CCTGCTACCTCATACTCCCTAC 58.841 54.545 0.00 0.00 0.00 3.18
5116 5523 2.491086 GCCTGCTACCTCATACTCCCTA 60.491 54.545 0.00 0.00 0.00 3.53
5117 5524 1.759562 GCCTGCTACCTCATACTCCCT 60.760 57.143 0.00 0.00 0.00 4.20
5118 5525 0.682292 GCCTGCTACCTCATACTCCC 59.318 60.000 0.00 0.00 0.00 4.30
5119 5526 0.682292 GGCCTGCTACCTCATACTCC 59.318 60.000 0.00 0.00 0.00 3.85
5120 5527 1.414158 TGGCCTGCTACCTCATACTC 58.586 55.000 3.32 0.00 0.00 2.59
5121 5528 1.696336 CATGGCCTGCTACCTCATACT 59.304 52.381 3.32 0.00 0.00 2.12
5122 5529 1.417890 ACATGGCCTGCTACCTCATAC 59.582 52.381 3.32 0.00 0.00 2.39
5123 5530 1.806496 ACATGGCCTGCTACCTCATA 58.194 50.000 3.32 0.00 0.00 2.15
5124 5531 1.417890 GTACATGGCCTGCTACCTCAT 59.582 52.381 3.32 0.00 0.00 2.90
5285 5859 2.174363 TCTGATGCCAAGACACAGTG 57.826 50.000 0.00 0.00 0.00 3.66
5383 5962 5.531122 TGTACTGATAAATAGCGGCTCTT 57.469 39.130 5.39 0.00 0.00 2.85
5442 6027 2.832129 ACACTCTCTCCCGCTTTCATTA 59.168 45.455 0.00 0.00 0.00 1.90
5443 6028 1.625818 ACACTCTCTCCCGCTTTCATT 59.374 47.619 0.00 0.00 0.00 2.57
5444 6029 1.205893 GACACTCTCTCCCGCTTTCAT 59.794 52.381 0.00 0.00 0.00 2.57
5445 6030 0.603569 GACACTCTCTCCCGCTTTCA 59.396 55.000 0.00 0.00 0.00 2.69
5448 6033 1.985116 GGGACACTCTCTCCCGCTT 60.985 63.158 0.00 0.00 38.24 4.68
5453 6038 1.611936 GGCAAAAGGGACACTCTCTCC 60.612 57.143 0.00 0.00 0.00 3.71
5454 6039 1.814793 GGCAAAAGGGACACTCTCTC 58.185 55.000 0.00 0.00 0.00 3.20
5455 6040 0.035458 CGGCAAAAGGGACACTCTCT 59.965 55.000 0.00 0.00 0.00 3.10
5456 6041 0.034896 TCGGCAAAAGGGACACTCTC 59.965 55.000 0.00 0.00 0.00 3.20
5457 6042 0.035458 CTCGGCAAAAGGGACACTCT 59.965 55.000 0.00 0.00 0.00 3.24
5458 6043 0.034896 TCTCGGCAAAAGGGACACTC 59.965 55.000 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.