Multiple sequence alignment - TraesCS5D01G279400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G279400 chr5D 100.000 6262 0 0 1 6262 381415493 381409232 0.000000e+00 11564.0
1 TraesCS5D01G279400 chr5D 79.644 506 70 11 2 480 275033113 275032614 3.620000e-87 333.0
2 TraesCS5D01G279400 chr5A 93.599 2781 112 37 2833 5583 481912111 481909367 0.000000e+00 4089.0
3 TraesCS5D01G279400 chr5A 87.197 1156 82 33 566 1673 481914366 481913229 0.000000e+00 1254.0
4 TraesCS5D01G279400 chr5A 92.105 570 41 4 2200 2767 481912709 481912142 0.000000e+00 800.0
5 TraesCS5D01G279400 chr5A 79.371 286 37 12 5998 6261 481909216 481908931 1.390000e-41 182.0
6 TraesCS5D01G279400 chr5A 93.458 107 6 1 1709 1815 481912911 481912806 2.340000e-34 158.0
7 TraesCS5D01G279400 chr5A 95.000 40 1 1 2169 2207 481912796 481912757 1.880000e-05 62.1
8 TraesCS5D01G279400 chr5B 94.583 2049 77 19 3708 5738 457344119 457342087 0.000000e+00 3138.0
9 TraesCS5D01G279400 chr5B 90.521 1287 47 25 596 1847 457347330 457346084 0.000000e+00 1631.0
10 TraesCS5D01G279400 chr5B 95.581 860 26 4 2860 3709 457345014 457344157 0.000000e+00 1367.0
11 TraesCS5D01G279400 chr5B 97.099 586 17 0 2200 2785 457345626 457345041 0.000000e+00 989.0
12 TraesCS5D01G279400 chr5B 96.089 358 11 2 1848 2204 457346028 457345673 1.170000e-161 580.0
13 TraesCS5D01G279400 chr5B 81.293 294 35 9 182 474 494035015 494034741 2.940000e-53 220.0
14 TraesCS5D01G279400 chr5B 81.053 190 17 15 5934 6107 457341891 457341705 3.940000e-27 134.0
15 TraesCS5D01G279400 chr7B 82.319 345 50 9 136 476 718984199 718984536 7.940000e-74 289.0
16 TraesCS5D01G279400 chr7B 88.776 98 11 0 2241 2338 179199184 179199281 3.070000e-23 121.0
17 TraesCS5D01G279400 chr4D 83.013 312 45 4 166 476 329315102 329314798 6.180000e-70 276.0
18 TraesCS5D01G279400 chr2B 85.897 234 25 5 97 329 717047941 717048167 6.270000e-60 243.0
19 TraesCS5D01G279400 chr2A 80.403 347 40 15 46 365 649501476 649501821 8.110000e-59 239.0
20 TraesCS5D01G279400 chr4B 80.503 318 51 9 166 476 409342000 409341687 3.770000e-57 233.0
21 TraesCS5D01G279400 chr3B 90.341 176 16 1 154 329 31262279 31262105 4.880000e-56 230.0
22 TraesCS5D01G279400 chr3B 77.711 166 34 3 260 423 807538792 807538628 1.440000e-16 99.0
23 TraesCS5D01G279400 chr2D 78.846 364 55 10 117 478 21459038 21458695 6.320000e-55 226.0
24 TraesCS5D01G279400 chr3D 80.258 233 36 9 176 407 516656212 516656435 3.880000e-37 167.0
25 TraesCS5D01G279400 chr3A 82.474 97 7 7 3614 3708 742434006 742433918 6.730000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G279400 chr5D 381409232 381415493 6261 True 11564.00 11564 100.000000 1 6262 1 chr5D.!!$R2 6261
1 TraesCS5D01G279400 chr5A 481908931 481914366 5435 True 1090.85 4089 90.121667 566 6261 6 chr5A.!!$R1 5695
2 TraesCS5D01G279400 chr5B 457341705 457347330 5625 True 1306.50 3138 92.487667 596 6107 6 chr5B.!!$R2 5511

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
418 419 0.027979 CCGCACGGCTGATACAAATG 59.972 55.000 0.0 0.0 0.00 2.32 F
1171 1196 0.028902 GTTGGTTTGCTGGTGTCGTC 59.971 55.000 0.0 0.0 0.00 4.20 F
1450 1520 0.242825 TTCGGTGCTCTGTAAGACGG 59.757 55.000 0.0 0.0 38.67 4.79 F
2063 2474 0.944386 CAGTTCCCTTTGTCGTGTGG 59.056 55.000 0.0 0.0 0.00 4.17 F
2904 3397 1.134401 GCCTCTGCTGCACTAATACCA 60.134 52.381 0.0 0.0 33.53 3.25 F
3607 4123 2.038033 ACTTTGTAACCGCCTCTTGCTA 59.962 45.455 0.0 0.0 38.05 3.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1447 1517 0.252197 GCTGACTAAATCCCACCCGT 59.748 55.000 0.00 0.0 0.00 5.28 R
2165 2576 1.667724 GTAGCACTACTGCAGCAATGG 59.332 52.381 15.27 0.0 46.97 3.16 R
2904 3397 3.297134 TCTGTTTGAAGGCTTTCCAGT 57.703 42.857 6.06 0.0 32.09 4.00 R
3488 4004 1.745653 GCCTCAGCAACCTGGATAAAC 59.254 52.381 0.00 0.0 39.61 2.01 R
4583 5138 1.851304 ATGGTGGGTTTGCATCGAAT 58.149 45.000 0.00 0.0 0.00 3.34 R
5565 6127 0.394352 GCACCCATAGACACAAGGGG 60.394 60.000 0.00 0.0 45.83 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.355126 GCGCATGCGAGCTAGCTA 60.355 61.111 41.98 1.88 42.83 3.32
21 22 2.371158 GCGCATGCGAGCTAGCTAG 61.371 63.158 41.98 19.42 42.83 3.42
34 35 2.956964 GCTAGCTAGCCGCACACG 60.957 66.667 31.67 0.29 43.39 4.49
44 45 4.692129 CGCACACGGACTAGCTAG 57.308 61.111 19.44 19.44 34.97 3.42
45 46 1.801332 CGCACACGGACTAGCTAGT 59.199 57.895 26.35 26.35 39.71 2.57
46 47 0.170561 CGCACACGGACTAGCTAGTT 59.829 55.000 26.71 9.29 36.50 2.24
47 48 1.399440 CGCACACGGACTAGCTAGTTA 59.601 52.381 26.71 0.00 36.50 2.24
48 49 2.539142 CGCACACGGACTAGCTAGTTAG 60.539 54.545 26.71 23.31 36.50 2.34
58 59 4.427394 CTAGTTAGCAGCTGGCCG 57.573 61.111 17.12 0.00 46.50 6.13
59 60 1.884926 CTAGTTAGCAGCTGGCCGC 60.885 63.158 17.12 11.02 46.50 6.53
60 61 2.578163 CTAGTTAGCAGCTGGCCGCA 62.578 60.000 17.12 0.00 46.50 5.69
61 62 2.852495 TAGTTAGCAGCTGGCCGCAC 62.852 60.000 17.12 11.87 46.50 5.34
62 63 4.328025 TTAGCAGCTGGCCGCACA 62.328 61.111 17.12 0.00 46.50 4.57
63 64 3.626996 TTAGCAGCTGGCCGCACAT 62.627 57.895 17.12 8.43 46.50 3.21
68 69 4.865761 GCTGGCCGCACATGCATG 62.866 66.667 25.09 25.09 42.21 4.06
69 70 4.865761 CTGGCCGCACATGCATGC 62.866 66.667 26.53 14.55 42.21 4.06
72 73 4.423022 GCCGCACATGCATGCACA 62.423 61.111 25.37 0.00 46.47 4.57
73 74 2.202557 CCGCACATGCATGCACAG 60.203 61.111 25.37 20.82 46.47 3.66
74 75 2.878991 CGCACATGCATGCACAGC 60.879 61.111 25.37 24.17 46.47 4.40
75 76 2.571757 GCACATGCATGCACAGCT 59.428 55.556 25.37 3.57 45.39 4.24
76 77 1.805539 GCACATGCATGCACAGCTG 60.806 57.895 25.37 19.72 45.39 4.24
77 78 1.805539 CACATGCATGCACAGCTGC 60.806 57.895 25.37 8.65 44.52 5.25
94 95 3.179265 CGGTGCTCGCCGTTGTAG 61.179 66.667 13.22 0.00 46.11 2.74
95 96 3.488090 GGTGCTCGCCGTTGTAGC 61.488 66.667 0.00 0.00 36.77 3.58
96 97 2.432628 GTGCTCGCCGTTGTAGCT 60.433 61.111 0.00 0.00 37.16 3.32
97 98 2.126071 TGCTCGCCGTTGTAGCTC 60.126 61.111 0.00 0.00 37.16 4.09
98 99 3.248171 GCTCGCCGTTGTAGCTCG 61.248 66.667 0.00 0.00 33.40 5.03
99 100 3.248171 CTCGCCGTTGTAGCTCGC 61.248 66.667 0.00 0.00 0.00 5.03
103 104 3.838795 CCGTTGTAGCTCGCGCAC 61.839 66.667 8.75 0.00 39.10 5.34
104 105 3.838795 CGTTGTAGCTCGCGCACC 61.839 66.667 8.75 0.00 39.10 5.01
105 106 3.488090 GTTGTAGCTCGCGCACCC 61.488 66.667 8.75 0.00 39.10 4.61
106 107 3.997397 TTGTAGCTCGCGCACCCA 61.997 61.111 8.75 0.00 39.10 4.51
107 108 3.932580 TTGTAGCTCGCGCACCCAG 62.933 63.158 8.75 0.00 39.10 4.45
108 109 4.436998 GTAGCTCGCGCACCCAGT 62.437 66.667 8.75 0.00 39.10 4.00
109 110 4.129737 TAGCTCGCGCACCCAGTC 62.130 66.667 8.75 0.00 39.10 3.51
176 177 4.853050 GCTCGCCCTGCTGCATCT 62.853 66.667 1.31 0.00 0.00 2.90
177 178 2.588314 CTCGCCCTGCTGCATCTC 60.588 66.667 1.31 0.00 0.00 2.75
178 179 4.519437 TCGCCCTGCTGCATCTCG 62.519 66.667 1.31 7.00 0.00 4.04
186 187 3.646976 CTGCATCTCGCCGGCATG 61.647 66.667 28.98 22.98 41.33 4.06
197 198 4.473520 CGGCATGGGGTTCGAGCT 62.474 66.667 0.00 0.00 0.00 4.09
198 199 2.514824 GGCATGGGGTTCGAGCTC 60.515 66.667 2.73 2.73 0.00 4.09
199 200 2.892425 GCATGGGGTTCGAGCTCG 60.892 66.667 30.03 30.03 41.45 5.03
258 259 2.983592 TGCTCCTGCAGACGTCGA 60.984 61.111 17.39 1.92 45.31 4.20
259 260 2.505118 GCTCCTGCAGACGTCGAC 60.505 66.667 17.39 5.18 39.41 4.20
260 261 2.179517 CTCCTGCAGACGTCGACC 59.820 66.667 17.39 3.06 0.00 4.79
261 262 2.282251 TCCTGCAGACGTCGACCT 60.282 61.111 17.39 0.00 0.00 3.85
262 263 2.179517 CCTGCAGACGTCGACCTC 59.820 66.667 17.39 8.28 0.00 3.85
263 264 2.202362 CTGCAGACGTCGACCTCG 60.202 66.667 8.42 0.40 41.45 4.63
264 265 4.400109 TGCAGACGTCGACCTCGC 62.400 66.667 10.58 15.07 39.60 5.03
266 267 3.432588 CAGACGTCGACCTCGCCT 61.433 66.667 10.58 0.00 39.60 5.52
267 268 3.126225 AGACGTCGACCTCGCCTC 61.126 66.667 10.58 0.00 39.60 4.70
268 269 3.126225 GACGTCGACCTCGCCTCT 61.126 66.667 10.58 0.00 39.60 3.69
269 270 3.098377 GACGTCGACCTCGCCTCTC 62.098 68.421 10.58 0.00 39.60 3.20
270 271 3.878519 CGTCGACCTCGCCTCTCC 61.879 72.222 10.58 0.00 39.60 3.71
271 272 3.878519 GTCGACCTCGCCTCTCCG 61.879 72.222 3.51 0.00 39.60 4.63
303 304 2.765807 GAGCTCCCCTGCCTGCTA 60.766 66.667 0.87 0.00 35.76 3.49
304 305 3.086600 AGCTCCCCTGCCTGCTAC 61.087 66.667 0.00 0.00 33.64 3.58
305 306 4.537433 GCTCCCCTGCCTGCTACG 62.537 72.222 0.00 0.00 0.00 3.51
306 307 3.077556 CTCCCCTGCCTGCTACGT 61.078 66.667 0.00 0.00 0.00 3.57
307 308 3.376935 CTCCCCTGCCTGCTACGTG 62.377 68.421 0.00 0.00 0.00 4.49
308 309 3.706373 CCCCTGCCTGCTACGTGT 61.706 66.667 0.00 0.00 0.00 4.49
309 310 2.347490 CCCTGCCTGCTACGTGTT 59.653 61.111 0.00 0.00 0.00 3.32
310 311 1.302511 CCCTGCCTGCTACGTGTTT 60.303 57.895 0.00 0.00 0.00 2.83
311 312 1.577328 CCCTGCCTGCTACGTGTTTG 61.577 60.000 0.00 0.00 0.00 2.93
312 313 0.602638 CCTGCCTGCTACGTGTTTGA 60.603 55.000 0.00 0.00 0.00 2.69
313 314 1.225855 CTGCCTGCTACGTGTTTGAA 58.774 50.000 0.00 0.00 0.00 2.69
314 315 1.601903 CTGCCTGCTACGTGTTTGAAA 59.398 47.619 0.00 0.00 0.00 2.69
315 316 2.017782 TGCCTGCTACGTGTTTGAAAA 58.982 42.857 0.00 0.00 0.00 2.29
316 317 2.423892 TGCCTGCTACGTGTTTGAAAAA 59.576 40.909 0.00 0.00 0.00 1.94
337 338 2.676121 CCAGGGCGGCATGTGAAA 60.676 61.111 22.42 0.00 0.00 2.69
338 339 2.274645 CCAGGGCGGCATGTGAAAA 61.275 57.895 22.42 0.00 0.00 2.29
339 340 1.606885 CCAGGGCGGCATGTGAAAAT 61.607 55.000 22.42 0.00 0.00 1.82
340 341 0.247185 CAGGGCGGCATGTGAAAATT 59.753 50.000 16.21 0.00 0.00 1.82
341 342 0.247185 AGGGCGGCATGTGAAAATTG 59.753 50.000 12.47 0.00 0.00 2.32
342 343 0.740516 GGGCGGCATGTGAAAATTGG 60.741 55.000 12.47 0.00 0.00 3.16
343 344 0.740516 GGCGGCATGTGAAAATTGGG 60.741 55.000 3.07 0.00 0.00 4.12
344 345 0.037419 GCGGCATGTGAAAATTGGGT 60.037 50.000 0.00 0.00 0.00 4.51
345 346 1.994916 CGGCATGTGAAAATTGGGTC 58.005 50.000 0.00 0.00 0.00 4.46
346 347 1.545582 CGGCATGTGAAAATTGGGTCT 59.454 47.619 0.00 0.00 0.00 3.85
347 348 2.671914 CGGCATGTGAAAATTGGGTCTG 60.672 50.000 0.00 0.00 0.00 3.51
348 349 2.562298 GGCATGTGAAAATTGGGTCTGA 59.438 45.455 0.00 0.00 0.00 3.27
349 350 3.578688 GCATGTGAAAATTGGGTCTGAC 58.421 45.455 0.00 0.00 0.00 3.51
350 351 3.256631 GCATGTGAAAATTGGGTCTGACT 59.743 43.478 7.85 0.00 0.00 3.41
351 352 4.801891 CATGTGAAAATTGGGTCTGACTG 58.198 43.478 7.85 0.00 0.00 3.51
352 353 2.622942 TGTGAAAATTGGGTCTGACTGC 59.377 45.455 7.85 0.00 0.00 4.40
353 354 2.622942 GTGAAAATTGGGTCTGACTGCA 59.377 45.455 7.85 0.00 0.00 4.41
354 355 2.886523 TGAAAATTGGGTCTGACTGCAG 59.113 45.455 13.48 13.48 43.67 4.41
355 356 2.664402 AAATTGGGTCTGACTGCAGT 57.336 45.000 21.88 21.88 42.84 4.40
356 357 2.664402 AATTGGGTCTGACTGCAGTT 57.336 45.000 22.65 4.46 42.84 3.16
357 358 3.788227 AATTGGGTCTGACTGCAGTTA 57.212 42.857 22.65 16.68 42.84 2.24
358 359 2.839486 TTGGGTCTGACTGCAGTTAG 57.161 50.000 27.99 27.99 42.84 2.34
359 360 0.976641 TGGGTCTGACTGCAGTTAGG 59.023 55.000 31.44 19.58 42.84 2.69
360 361 0.391793 GGGTCTGACTGCAGTTAGGC 60.392 60.000 31.44 30.53 42.84 3.93
361 362 0.321671 GGTCTGACTGCAGTTAGGCA 59.678 55.000 35.20 21.82 42.84 4.75
362 363 1.433534 GTCTGACTGCAGTTAGGCAC 58.566 55.000 31.60 21.93 42.84 5.01
363 364 1.047801 TCTGACTGCAGTTAGGCACA 58.952 50.000 31.44 18.48 42.84 4.57
364 365 1.151668 CTGACTGCAGTTAGGCACAC 58.848 55.000 26.66 10.41 39.25 3.82
365 366 0.250295 TGACTGCAGTTAGGCACACC 60.250 55.000 22.65 5.07 39.25 4.16
366 367 1.291877 GACTGCAGTTAGGCACACCG 61.292 60.000 22.65 0.00 42.76 4.94
367 368 2.031919 TGCAGTTAGGCACACCGG 59.968 61.111 0.00 0.00 42.76 5.28
368 369 3.431725 GCAGTTAGGCACACCGGC 61.432 66.667 0.00 0.00 42.76 6.13
369 370 2.031919 CAGTTAGGCACACCGGCA 59.968 61.111 0.00 0.00 44.47 5.69
370 371 2.034879 CAGTTAGGCACACCGGCAG 61.035 63.158 0.00 0.00 44.47 4.85
371 372 2.214216 AGTTAGGCACACCGGCAGA 61.214 57.895 0.00 0.00 44.47 4.26
372 373 2.033194 GTTAGGCACACCGGCAGAC 61.033 63.158 0.00 0.00 44.47 3.51
373 374 3.248446 TTAGGCACACCGGCAGACC 62.248 63.158 0.00 0.00 44.47 3.85
376 377 4.947147 GCACACCGGCAGACCCAA 62.947 66.667 0.00 0.00 0.00 4.12
377 378 2.203280 CACACCGGCAGACCCAAA 60.203 61.111 0.00 0.00 0.00 3.28
378 379 1.603455 CACACCGGCAGACCCAAAT 60.603 57.895 0.00 0.00 0.00 2.32
379 380 1.603455 ACACCGGCAGACCCAAATG 60.603 57.895 0.00 0.00 0.00 2.32
380 381 1.303236 CACCGGCAGACCCAAATGA 60.303 57.895 0.00 0.00 0.00 2.57
381 382 0.893270 CACCGGCAGACCCAAATGAA 60.893 55.000 0.00 0.00 0.00 2.57
382 383 0.178975 ACCGGCAGACCCAAATGAAA 60.179 50.000 0.00 0.00 0.00 2.69
383 384 0.965439 CCGGCAGACCCAAATGAAAA 59.035 50.000 0.00 0.00 0.00 2.29
384 385 1.342819 CCGGCAGACCCAAATGAAAAA 59.657 47.619 0.00 0.00 0.00 1.94
385 386 2.610232 CCGGCAGACCCAAATGAAAAAG 60.610 50.000 0.00 0.00 0.00 2.27
386 387 2.416747 GGCAGACCCAAATGAAAAAGC 58.583 47.619 0.00 0.00 0.00 3.51
387 388 2.061028 GCAGACCCAAATGAAAAAGCG 58.939 47.619 0.00 0.00 0.00 4.68
388 389 2.676076 CAGACCCAAATGAAAAAGCGG 58.324 47.619 0.00 0.00 0.00 5.52
389 390 2.295909 CAGACCCAAATGAAAAAGCGGA 59.704 45.455 0.00 0.00 0.00 5.54
390 391 2.296190 AGACCCAAATGAAAAAGCGGAC 59.704 45.455 0.00 0.00 0.00 4.79
391 392 2.035321 GACCCAAATGAAAAAGCGGACA 59.965 45.455 0.00 0.00 0.00 4.02
392 393 2.432510 ACCCAAATGAAAAAGCGGACAA 59.567 40.909 0.00 0.00 0.00 3.18
393 394 3.118592 ACCCAAATGAAAAAGCGGACAAA 60.119 39.130 0.00 0.00 0.00 2.83
394 395 3.247411 CCCAAATGAAAAAGCGGACAAAC 59.753 43.478 0.00 0.00 0.00 2.93
395 396 3.868077 CCAAATGAAAAAGCGGACAAACA 59.132 39.130 0.00 0.00 0.00 2.83
396 397 4.260172 CCAAATGAAAAAGCGGACAAACAC 60.260 41.667 0.00 0.00 0.00 3.32
397 398 2.181426 TGAAAAAGCGGACAAACACG 57.819 45.000 0.00 0.00 0.00 4.49
398 399 1.469308 TGAAAAAGCGGACAAACACGT 59.531 42.857 0.00 0.00 0.00 4.49
399 400 2.106418 GAAAAAGCGGACAAACACGTC 58.894 47.619 0.00 0.00 35.03 4.34
404 405 2.629763 GGACAAACACGTCCGCAC 59.370 61.111 0.00 0.00 45.77 5.34
413 414 2.954868 CGTCCGCACGGCTGATAC 60.955 66.667 3.66 0.00 42.73 2.24
414 415 2.183300 GTCCGCACGGCTGATACA 59.817 61.111 3.66 0.00 34.68 2.29
415 416 1.447140 GTCCGCACGGCTGATACAA 60.447 57.895 3.66 0.00 34.68 2.41
416 417 1.017177 GTCCGCACGGCTGATACAAA 61.017 55.000 3.66 0.00 34.68 2.83
417 418 0.107897 TCCGCACGGCTGATACAAAT 60.108 50.000 3.66 0.00 34.68 2.32
418 419 0.027979 CCGCACGGCTGATACAAATG 59.972 55.000 0.00 0.00 0.00 2.32
419 420 0.027979 CGCACGGCTGATACAAATGG 59.972 55.000 0.00 0.00 0.00 3.16
420 421 1.378531 GCACGGCTGATACAAATGGA 58.621 50.000 0.00 0.00 0.00 3.41
421 422 1.064060 GCACGGCTGATACAAATGGAC 59.936 52.381 0.00 0.00 0.00 4.02
422 423 2.355197 CACGGCTGATACAAATGGACA 58.645 47.619 0.00 0.00 0.00 4.02
423 424 2.746904 CACGGCTGATACAAATGGACAA 59.253 45.455 0.00 0.00 0.00 3.18
424 425 3.190327 CACGGCTGATACAAATGGACAAA 59.810 43.478 0.00 0.00 0.00 2.83
425 426 3.823873 ACGGCTGATACAAATGGACAAAA 59.176 39.130 0.00 0.00 0.00 2.44
426 427 4.462483 ACGGCTGATACAAATGGACAAAAT 59.538 37.500 0.00 0.00 0.00 1.82
427 428 5.036737 CGGCTGATACAAATGGACAAAATC 58.963 41.667 0.00 0.00 0.00 2.17
437 438 1.790755 GGACAAAATCCGGGCAAAAC 58.209 50.000 0.00 0.00 37.88 2.43
438 439 1.414378 GACAAAATCCGGGCAAAACG 58.586 50.000 0.00 0.00 0.00 3.60
439 440 0.747852 ACAAAATCCGGGCAAAACGT 59.252 45.000 0.00 0.00 0.00 3.99
440 441 1.135867 CAAAATCCGGGCAAAACGTG 58.864 50.000 0.00 0.00 0.00 4.49
454 455 2.848310 CGTGCGTACGTTTGGGTC 59.152 61.111 18.32 0.00 44.99 4.46
455 456 2.660612 CGTGCGTACGTTTGGGTCC 61.661 63.158 18.32 0.00 44.99 4.46
456 457 2.356075 TGCGTACGTTTGGGTCCG 60.356 61.111 17.90 0.00 0.00 4.79
457 458 2.356194 GCGTACGTTTGGGTCCGT 60.356 61.111 17.90 0.00 40.87 4.69
458 459 2.660612 GCGTACGTTTGGGTCCGTG 61.661 63.158 17.90 0.00 37.91 4.94
459 460 2.023223 CGTACGTTTGGGTCCGTGG 61.023 63.158 7.22 0.00 37.91 4.94
460 461 1.668793 GTACGTTTGGGTCCGTGGG 60.669 63.158 0.00 0.00 37.91 4.61
461 462 2.139484 TACGTTTGGGTCCGTGGGT 61.139 57.895 0.00 0.00 37.91 4.51
462 463 1.694133 TACGTTTGGGTCCGTGGGTT 61.694 55.000 0.00 0.00 37.91 4.11
463 464 2.548295 CGTTTGGGTCCGTGGGTTG 61.548 63.158 0.00 0.00 0.00 3.77
464 465 1.152922 GTTTGGGTCCGTGGGTTGA 60.153 57.895 0.00 0.00 0.00 3.18
465 466 0.752376 GTTTGGGTCCGTGGGTTGAA 60.752 55.000 0.00 0.00 0.00 2.69
466 467 0.466555 TTTGGGTCCGTGGGTTGAAG 60.467 55.000 0.00 0.00 0.00 3.02
467 468 1.637724 TTGGGTCCGTGGGTTGAAGT 61.638 55.000 0.00 0.00 0.00 3.01
468 469 1.149854 GGGTCCGTGGGTTGAAGTT 59.850 57.895 0.00 0.00 0.00 2.66
469 470 1.170290 GGGTCCGTGGGTTGAAGTTG 61.170 60.000 0.00 0.00 0.00 3.16
470 471 1.652563 GTCCGTGGGTTGAAGTTGC 59.347 57.895 0.00 0.00 0.00 4.17
471 472 0.818040 GTCCGTGGGTTGAAGTTGCT 60.818 55.000 0.00 0.00 0.00 3.91
472 473 0.534203 TCCGTGGGTTGAAGTTGCTC 60.534 55.000 0.00 0.00 0.00 4.26
473 474 0.535102 CCGTGGGTTGAAGTTGCTCT 60.535 55.000 0.00 0.00 0.00 4.09
474 475 1.270625 CCGTGGGTTGAAGTTGCTCTA 60.271 52.381 0.00 0.00 0.00 2.43
475 476 2.489971 CGTGGGTTGAAGTTGCTCTAA 58.510 47.619 0.00 0.00 0.00 2.10
476 477 2.480419 CGTGGGTTGAAGTTGCTCTAAG 59.520 50.000 0.00 0.00 0.00 2.18
477 478 2.226674 GTGGGTTGAAGTTGCTCTAAGC 59.773 50.000 0.00 0.00 42.82 3.09
492 493 5.908341 GCTCTAAGCACCTTACATCTTAGT 58.092 41.667 0.00 0.00 41.89 2.24
493 494 7.040473 GCTCTAAGCACCTTACATCTTAGTA 57.960 40.000 0.00 0.00 41.89 1.82
494 495 7.662897 GCTCTAAGCACCTTACATCTTAGTAT 58.337 38.462 0.00 0.00 41.89 2.12
495 496 8.145122 GCTCTAAGCACCTTACATCTTAGTATT 58.855 37.037 0.00 0.00 41.89 1.89
508 509 7.949434 ACATCTTAGTATTAGTTTACGGAGGG 58.051 38.462 0.00 0.00 0.00 4.30
509 510 7.781693 ACATCTTAGTATTAGTTTACGGAGGGA 59.218 37.037 0.00 0.00 0.00 4.20
510 511 7.814264 TCTTAGTATTAGTTTACGGAGGGAG 57.186 40.000 0.00 0.00 0.00 4.30
511 512 7.349598 TCTTAGTATTAGTTTACGGAGGGAGT 58.650 38.462 0.00 0.00 0.00 3.85
512 513 8.494433 TCTTAGTATTAGTTTACGGAGGGAGTA 58.506 37.037 0.00 0.00 0.00 2.59
513 514 9.294614 CTTAGTATTAGTTTACGGAGGGAGTAT 57.705 37.037 0.00 0.00 0.00 2.12
516 517 9.294614 AGTATTAGTTTACGGAGGGAGTATAAG 57.705 37.037 0.00 0.00 0.00 1.73
517 518 6.966534 TTAGTTTACGGAGGGAGTATAAGG 57.033 41.667 0.00 0.00 0.00 2.69
518 519 4.876580 AGTTTACGGAGGGAGTATAAGGT 58.123 43.478 0.00 0.00 0.00 3.50
519 520 5.275630 AGTTTACGGAGGGAGTATAAGGTT 58.724 41.667 0.00 0.00 0.00 3.50
520 521 6.435164 AGTTTACGGAGGGAGTATAAGGTTA 58.565 40.000 0.00 0.00 0.00 2.85
521 522 7.071917 AGTTTACGGAGGGAGTATAAGGTTAT 58.928 38.462 0.00 0.00 0.00 1.89
522 523 6.906157 TTACGGAGGGAGTATAAGGTTATG 57.094 41.667 0.00 0.00 0.00 1.90
523 524 4.158015 ACGGAGGGAGTATAAGGTTATGG 58.842 47.826 0.00 0.00 0.00 2.74
524 525 3.514309 CGGAGGGAGTATAAGGTTATGGG 59.486 52.174 0.00 0.00 0.00 4.00
525 526 3.263681 GGAGGGAGTATAAGGTTATGGGC 59.736 52.174 0.00 0.00 0.00 5.36
526 527 2.904434 AGGGAGTATAAGGTTATGGGCG 59.096 50.000 0.00 0.00 0.00 6.13
527 528 2.614734 GGGAGTATAAGGTTATGGGCGC 60.615 54.545 0.00 0.00 0.00 6.53
528 529 2.614734 GGAGTATAAGGTTATGGGCGCC 60.615 54.545 21.18 21.18 0.00 6.53
529 530 1.001633 AGTATAAGGTTATGGGCGCCG 59.998 52.381 22.54 0.00 0.00 6.46
530 531 1.050204 TATAAGGTTATGGGCGCCGT 58.950 50.000 22.54 14.61 0.00 5.68
531 532 0.181824 ATAAGGTTATGGGCGCCGTT 59.818 50.000 22.54 13.00 0.00 4.44
532 533 0.035247 TAAGGTTATGGGCGCCGTTT 60.035 50.000 22.54 10.14 0.00 3.60
533 534 0.035247 AAGGTTATGGGCGCCGTTTA 60.035 50.000 22.54 9.02 0.00 2.01
534 535 0.181824 AGGTTATGGGCGCCGTTTAT 59.818 50.000 22.54 14.30 0.00 1.40
535 536 0.309612 GGTTATGGGCGCCGTTTATG 59.690 55.000 22.54 0.00 0.00 1.90
536 537 1.301423 GTTATGGGCGCCGTTTATGA 58.699 50.000 22.54 6.18 0.00 2.15
537 538 1.671845 GTTATGGGCGCCGTTTATGAA 59.328 47.619 22.54 4.36 0.00 2.57
538 539 2.039818 TATGGGCGCCGTTTATGAAA 57.960 45.000 22.54 0.00 0.00 2.69
539 540 1.398692 ATGGGCGCCGTTTATGAAAT 58.601 45.000 22.54 0.00 0.00 2.17
540 541 0.453793 TGGGCGCCGTTTATGAAATG 59.546 50.000 22.54 0.00 0.00 2.32
541 542 0.869880 GGGCGCCGTTTATGAAATGC 60.870 55.000 22.54 0.00 0.00 3.56
542 543 0.869880 GGCGCCGTTTATGAAATGCC 60.870 55.000 12.58 0.00 0.00 4.40
543 544 1.199852 GCGCCGTTTATGAAATGCCG 61.200 55.000 0.00 0.00 0.00 5.69
544 545 0.591236 CGCCGTTTATGAAATGCCGG 60.591 55.000 0.00 0.00 35.93 6.13
545 546 0.454196 GCCGTTTATGAAATGCCGGT 59.546 50.000 1.90 0.00 35.48 5.28
546 547 1.671845 GCCGTTTATGAAATGCCGGTA 59.328 47.619 1.90 0.00 35.48 4.02
547 548 2.292292 GCCGTTTATGAAATGCCGGTAT 59.708 45.455 1.90 0.00 35.48 2.73
548 549 3.499157 GCCGTTTATGAAATGCCGGTATA 59.501 43.478 5.12 0.00 35.48 1.47
549 550 4.612033 GCCGTTTATGAAATGCCGGTATAC 60.612 45.833 5.12 4.08 35.48 1.47
550 551 4.083696 CCGTTTATGAAATGCCGGTATACC 60.084 45.833 12.27 12.27 30.69 2.73
551 552 4.083696 CGTTTATGAAATGCCGGTATACCC 60.084 45.833 16.47 3.79 0.00 3.69
552 553 4.708576 TTATGAAATGCCGGTATACCCA 57.291 40.909 16.47 9.67 0.00 4.51
553 554 2.335316 TGAAATGCCGGTATACCCAC 57.665 50.000 16.47 8.95 0.00 4.61
554 555 1.134037 TGAAATGCCGGTATACCCACC 60.134 52.381 16.47 5.36 35.04 4.61
555 556 0.184211 AAATGCCGGTATACCCACCC 59.816 55.000 16.47 2.94 34.90 4.61
556 557 1.712000 AATGCCGGTATACCCACCCC 61.712 60.000 16.47 1.23 34.90 4.95
557 558 3.563224 GCCGGTATACCCACCCCC 61.563 72.222 16.47 0.00 34.90 5.40
558 559 2.040674 CCGGTATACCCACCCCCA 60.041 66.667 16.47 0.00 34.90 4.96
559 560 2.144738 CCGGTATACCCACCCCCAG 61.145 68.421 16.47 0.00 34.90 4.45
560 561 1.383525 CGGTATACCCACCCCCAGT 60.384 63.158 16.47 0.00 34.90 4.00
561 562 1.405272 CGGTATACCCACCCCCAGTC 61.405 65.000 16.47 0.00 34.90 3.51
562 563 1.058428 GGTATACCCACCCCCAGTCC 61.058 65.000 11.17 0.00 31.91 3.85
563 564 0.326808 GTATACCCACCCCCAGTCCA 60.327 60.000 0.00 0.00 0.00 4.02
564 565 0.030501 TATACCCACCCCCAGTCCAG 60.031 60.000 0.00 0.00 0.00 3.86
572 573 2.603473 CCCAGTCCAGTCCGGTCA 60.603 66.667 0.00 0.00 35.57 4.02
594 595 3.399181 TCTCCGGTGGGCCATGTC 61.399 66.667 10.70 1.53 34.09 3.06
628 632 1.677300 ATCGCCGCAAATCCAACCA 60.677 52.632 0.00 0.00 0.00 3.67
629 633 1.037030 ATCGCCGCAAATCCAACCAT 61.037 50.000 0.00 0.00 0.00 3.55
794 802 2.406616 CCCCTTTCCATTCCACGCG 61.407 63.158 3.53 3.53 0.00 6.01
915 926 1.906333 GGAGGAGATCTCGGGAGGC 60.906 68.421 16.46 1.58 43.34 4.70
968 979 1.269413 GCGGCCTGATTGATTGATTGG 60.269 52.381 0.00 0.00 0.00 3.16
969 980 2.026641 CGGCCTGATTGATTGATTGGT 58.973 47.619 0.00 0.00 0.00 3.67
972 983 3.431207 GGCCTGATTGATTGATTGGTTGG 60.431 47.826 0.00 0.00 0.00 3.77
974 985 4.322953 GCCTGATTGATTGATTGGTTGGTT 60.323 41.667 0.00 0.00 0.00 3.67
976 987 5.047164 CCTGATTGATTGATTGGTTGGTTGA 60.047 40.000 0.00 0.00 0.00 3.18
983 994 4.700268 TGATTGGTTGGTTGATCGATTG 57.300 40.909 0.00 0.00 0.00 2.67
984 995 4.331108 TGATTGGTTGGTTGATCGATTGA 58.669 39.130 0.00 0.00 0.00 2.57
985 996 4.949238 TGATTGGTTGGTTGATCGATTGAT 59.051 37.500 0.00 0.00 37.60 2.57
1101 1112 4.988598 AAGGTCGTGCCACTGCCG 62.989 66.667 0.00 0.00 40.61 5.69
1121 1132 4.445545 CGCTTGCGCTTTCCCGTC 62.446 66.667 9.73 0.00 0.00 4.79
1126 1151 1.816863 TTGCGCTTTCCCGTCTCTCT 61.817 55.000 9.73 0.00 0.00 3.10
1127 1152 1.517475 GCGCTTTCCCGTCTCTCTC 60.517 63.158 0.00 0.00 0.00 3.20
1136 1161 2.482333 CGTCTCTCTCCCGGCGAAT 61.482 63.158 9.30 0.00 0.00 3.34
1155 1180 1.438651 TTTCGCTCTCATTCCGGTTG 58.561 50.000 0.00 0.36 0.00 3.77
1156 1181 0.391130 TTCGCTCTCATTCCGGTTGG 60.391 55.000 0.00 0.00 0.00 3.77
1157 1182 1.079127 CGCTCTCATTCCGGTTGGT 60.079 57.895 0.00 0.00 36.30 3.67
1158 1183 0.673644 CGCTCTCATTCCGGTTGGTT 60.674 55.000 0.00 0.00 36.30 3.67
1169 1194 1.358759 GGTTGGTTTGCTGGTGTCG 59.641 57.895 0.00 0.00 0.00 4.35
1170 1195 1.381165 GGTTGGTTTGCTGGTGTCGT 61.381 55.000 0.00 0.00 0.00 4.34
1171 1196 0.028902 GTTGGTTTGCTGGTGTCGTC 59.971 55.000 0.00 0.00 0.00 4.20
1172 1197 1.433053 TTGGTTTGCTGGTGTCGTCG 61.433 55.000 0.00 0.00 0.00 5.12
1173 1198 1.885850 GGTTTGCTGGTGTCGTCGT 60.886 57.895 0.00 0.00 0.00 4.34
1174 1199 1.433837 GGTTTGCTGGTGTCGTCGTT 61.434 55.000 0.00 0.00 0.00 3.85
1191 1222 1.518133 TTGTTGTTGTTGCAGGCGC 60.518 52.632 0.00 0.00 39.24 6.53
1270 1301 3.013327 TGCTCCCTCTGCCATGCT 61.013 61.111 0.00 0.00 0.00 3.79
1292 1323 2.597217 TTTGCTTCCCCACTGCCG 60.597 61.111 0.00 0.00 0.00 5.69
1294 1325 2.058125 TTTGCTTCCCCACTGCCGTA 62.058 55.000 0.00 0.00 0.00 4.02
1300 1331 2.291043 CCCCACTGCCGTAACCTCT 61.291 63.158 0.00 0.00 0.00 3.69
1373 1419 2.125391 TGCCAGCGACTGATCAGC 60.125 61.111 22.83 13.93 32.44 4.26
1424 1482 8.040002 TGATGTAAATTAGTGGGGATCATGTA 57.960 34.615 0.00 0.00 0.00 2.29
1426 1484 9.520515 GATGTAAATTAGTGGGGATCATGTATT 57.479 33.333 0.00 0.00 0.00 1.89
1436 1494 4.827284 GGGGATCATGTATTTTCATTCGGT 59.173 41.667 0.00 0.00 0.00 4.69
1443 1501 4.323417 TGTATTTTCATTCGGTGCTCTGT 58.677 39.130 0.00 0.00 0.00 3.41
1447 1517 3.953712 TTCATTCGGTGCTCTGTAAGA 57.046 42.857 0.00 0.00 43.69 2.10
1449 1519 1.920574 CATTCGGTGCTCTGTAAGACG 59.079 52.381 0.00 0.00 38.67 4.18
1450 1520 0.242825 TTCGGTGCTCTGTAAGACGG 59.757 55.000 0.00 0.00 38.67 4.79
1451 1521 1.153823 CGGTGCTCTGTAAGACGGG 60.154 63.158 0.00 0.00 38.67 5.28
1452 1522 1.874345 CGGTGCTCTGTAAGACGGGT 61.874 60.000 0.00 0.00 38.67 5.28
1563 1634 2.159282 AGAACTGTATTACACCGGCTCG 60.159 50.000 0.00 0.00 0.00 5.03
1623 1694 2.033372 GTTACTAGCTCAGGGAGGGAC 58.967 57.143 0.00 0.00 0.00 4.46
1819 2174 4.959596 TGTCTAATGACGAGTAGGTGAC 57.040 45.455 0.00 0.00 45.70 3.67
1831 2186 3.926616 AGTAGGTGACTTTGTGGAATCG 58.073 45.455 0.00 0.00 43.67 3.34
1838 2193 3.081804 GACTTTGTGGAATCGGAATGGT 58.918 45.455 0.00 0.00 0.00 3.55
1888 2298 6.739331 ACTTAATCTAGTCTCCCCATTGAG 57.261 41.667 0.00 0.00 0.00 3.02
1973 2384 4.395854 TGTACACCATGAATCATTCTGCAC 59.604 41.667 0.00 0.00 0.00 4.57
2024 2435 6.822667 ACATCAATTAACTGAAGCATGTGA 57.177 33.333 0.00 0.00 0.00 3.58
2025 2436 7.218228 ACATCAATTAACTGAAGCATGTGAA 57.782 32.000 0.00 0.00 0.00 3.18
2063 2474 0.944386 CAGTTCCCTTTGTCGTGTGG 59.056 55.000 0.00 0.00 0.00 4.17
2068 2479 1.503818 CCCTTTGTCGTGTGGTTCGG 61.504 60.000 0.00 0.00 0.00 4.30
2092 2503 5.182001 GTCTCAACCACAGATTGCTTGTATT 59.818 40.000 0.00 0.00 0.00 1.89
2125 2536 1.939974 TATCAGCCATCACGCAAGAC 58.060 50.000 0.00 0.00 43.62 3.01
2165 2576 2.857748 GTTACTTTTGCAGTGTGTTGGC 59.142 45.455 0.00 0.00 35.97 4.52
2455 2922 7.723324 TCCGTTCTTTCCTAGATATAGGTTTG 58.277 38.462 13.09 4.96 38.38 2.93
2595 3062 3.947196 TGCAATGCTATTTGGTAGTGAGG 59.053 43.478 6.82 0.00 32.72 3.86
2794 3262 9.877178 CCATAGAAGATTAGGGTGTATATTGAC 57.123 37.037 0.00 0.00 0.00 3.18
2798 3266 9.440761 AGAAGATTAGGGTGTATATTGACTTCT 57.559 33.333 0.00 0.00 35.80 2.85
2800 3268 8.196378 AGATTAGGGTGTATATTGACTTCTCC 57.804 38.462 0.00 0.00 0.00 3.71
2802 3270 7.931015 TTAGGGTGTATATTGACTTCTCCAT 57.069 36.000 0.00 0.00 0.00 3.41
2803 3271 9.615660 ATTAGGGTGTATATTGACTTCTCCATA 57.384 33.333 0.00 0.00 0.00 2.74
2805 3273 7.306013 AGGGTGTATATTGACTTCTCCATAGA 58.694 38.462 0.00 0.00 0.00 1.98
2818 3286 6.814954 TTCTCCATAGAAGATTAGGTTGCT 57.185 37.500 0.00 0.00 36.80 3.91
2819 3287 6.166984 TCTCCATAGAAGATTAGGTTGCTG 57.833 41.667 0.00 0.00 0.00 4.41
2820 3288 5.899547 TCTCCATAGAAGATTAGGTTGCTGA 59.100 40.000 0.00 0.00 0.00 4.26
2821 3289 5.918608 TCCATAGAAGATTAGGTTGCTGAC 58.081 41.667 0.00 0.00 0.00 3.51
2822 3290 5.425217 TCCATAGAAGATTAGGTTGCTGACA 59.575 40.000 0.00 0.00 0.00 3.58
2823 3291 6.070251 TCCATAGAAGATTAGGTTGCTGACAA 60.070 38.462 0.00 0.00 0.00 3.18
2824 3292 6.599244 CCATAGAAGATTAGGTTGCTGACAAA 59.401 38.462 0.00 0.00 37.58 2.83
2825 3293 7.121168 CCATAGAAGATTAGGTTGCTGACAAAA 59.879 37.037 0.00 0.00 37.58 2.44
2826 3294 8.680903 CATAGAAGATTAGGTTGCTGACAAAAT 58.319 33.333 0.00 0.00 37.58 1.82
2827 3295 9.905713 ATAGAAGATTAGGTTGCTGACAAAATA 57.094 29.630 0.00 0.00 37.58 1.40
2828 3296 8.814038 AGAAGATTAGGTTGCTGACAAAATAT 57.186 30.769 0.00 0.00 37.58 1.28
2829 3297 9.247861 AGAAGATTAGGTTGCTGACAAAATATT 57.752 29.630 0.00 0.00 37.58 1.28
2853 3321 8.512966 TTAATGTATATTGTACAAGCAAGCCA 57.487 30.769 14.65 6.24 0.00 4.75
2854 3322 7.587037 AATGTATATTGTACAAGCAAGCCAT 57.413 32.000 14.65 8.12 0.00 4.40
2855 3323 8.690203 AATGTATATTGTACAAGCAAGCCATA 57.310 30.769 14.65 0.00 0.00 2.74
2856 3324 7.728847 TGTATATTGTACAAGCAAGCCATAG 57.271 36.000 14.65 0.00 0.00 2.23
2857 3325 7.279615 TGTATATTGTACAAGCAAGCCATAGT 58.720 34.615 14.65 0.00 0.00 2.12
2858 3326 8.425703 TGTATATTGTACAAGCAAGCCATAGTA 58.574 33.333 14.65 0.00 0.00 1.82
2904 3397 1.134401 GCCTCTGCTGCACTAATACCA 60.134 52.381 0.00 0.00 33.53 3.25
3277 3793 7.728847 AGCATGCTTATTGACGTTATAATGA 57.271 32.000 16.30 0.00 0.00 2.57
3316 3832 7.209475 AGAAATGCTAGCTAAGATGTCTCTTC 58.791 38.462 17.23 1.74 40.92 2.87
3488 4004 8.940768 TTTATGTTCAAGGAAACAAAAAGGAG 57.059 30.769 0.00 0.00 42.10 3.69
3545 4061 4.350368 TTCTGATGCAGGTGACAAACTA 57.650 40.909 0.00 0.00 31.51 2.24
3607 4123 2.038033 ACTTTGTAACCGCCTCTTGCTA 59.962 45.455 0.00 0.00 38.05 3.49
3675 4191 4.560716 GCCACTTTTTCCTTGTGTATTCCC 60.561 45.833 0.00 0.00 0.00 3.97
3698 4214 7.454380 TCCCCAACATAAATCAAACTTTGAGAT 59.546 33.333 9.97 4.24 43.98 2.75
3904 4459 2.154462 GTGACAGCTGCAACAGGTAAT 58.846 47.619 15.27 0.00 40.40 1.89
3959 4514 6.949877 GCAGTTTTGATTTCGATATTTGCAAC 59.050 34.615 0.00 0.00 0.00 4.17
3978 4533 4.785341 GCAACGTTGGTGCTAGCAATATAC 60.785 45.833 28.33 13.80 37.94 1.47
3979 4534 3.120792 ACGTTGGTGCTAGCAATATACG 58.879 45.455 27.14 27.14 37.94 3.06
3980 4535 2.475111 CGTTGGTGCTAGCAATATACGG 59.525 50.000 21.29 8.10 37.94 4.02
3981 4536 3.724374 GTTGGTGCTAGCAATATACGGA 58.276 45.455 21.29 0.00 37.94 4.69
3982 4537 3.660501 TGGTGCTAGCAATATACGGAG 57.339 47.619 21.29 0.00 0.00 4.63
3983 4538 3.386726 TTGGTGCTAGCAATATACGGAGT 59.613 43.478 21.29 0.00 35.93 3.85
3984 4539 4.585581 TTGGTGCTAGCAATATACGGAGTA 59.414 41.667 21.29 0.00 37.85 2.59
4206 4761 3.064820 GTCACGTGTCTGTCAAATGGTTT 59.935 43.478 16.51 0.00 0.00 3.27
4323 4878 4.081531 AGAGCAATGTCAAGAGAGAGGAAG 60.082 45.833 0.00 0.00 0.00 3.46
4379 4934 7.919385 AGGCAAAATATTCCAGGTATCATTT 57.081 32.000 0.00 0.00 0.00 2.32
4483 5038 4.062293 ACACAGCGTGTTAAGCTCAATAA 58.938 39.130 8.25 0.00 45.08 1.40
4564 5119 2.555199 CTCTCCGGATTCATCACCAAC 58.445 52.381 3.57 0.00 0.00 3.77
4583 5138 4.980592 TCTCCCAGGGTGCAGCCA 62.981 66.667 34.87 14.86 39.65 4.75
4685 5244 5.460748 GCAAGTTTTTATACGTGGCTGTTTT 59.539 36.000 0.00 0.00 0.00 2.43
4742 5301 5.673337 TCTTCCAAAAATGAACTCTGTCG 57.327 39.130 0.00 0.00 0.00 4.35
4792 5351 7.013464 TCGAGCTTTAGTTAACCCAATTTTTCA 59.987 33.333 0.88 0.00 0.00 2.69
4853 5412 3.257469 TCAGATGACAGATTGACAGGC 57.743 47.619 0.00 0.00 0.00 4.85
4861 5420 2.224843 ACAGATTGACAGGCATGGTGAA 60.225 45.455 2.31 0.00 0.00 3.18
4866 5425 1.955778 TGACAGGCATGGTGAACTTTG 59.044 47.619 2.31 0.00 0.00 2.77
4871 5430 2.170187 AGGCATGGTGAACTTTGCAAAA 59.830 40.909 13.84 0.00 36.82 2.44
4913 5472 0.615544 CCCATCACCAACAGGCCAAT 60.616 55.000 5.01 0.00 0.00 3.16
4988 5548 2.509569 TGACAGCCGCCAAAAGAAATA 58.490 42.857 0.00 0.00 0.00 1.40
4989 5549 2.487762 TGACAGCCGCCAAAAGAAATAG 59.512 45.455 0.00 0.00 0.00 1.73
4993 5553 4.168760 CAGCCGCCAAAAGAAATAGAAAG 58.831 43.478 0.00 0.00 0.00 2.62
5030 5590 2.931969 TCGCATATCAGCAAACTCACTG 59.068 45.455 0.00 0.00 35.15 3.66
5222 5784 0.673644 CGTTCAACTTCCCGATGCCT 60.674 55.000 0.00 0.00 0.00 4.75
5282 5844 2.971598 CGATCCAGGGCCACCAACT 61.972 63.158 6.18 0.00 40.13 3.16
5620 6182 1.894881 ATGGCCCATTTGTGCAAAAC 58.105 45.000 0.00 0.00 33.56 2.43
5623 6185 1.474855 GGCCCATTTGTGCAAAACAGT 60.475 47.619 0.00 0.00 40.74 3.55
5624 6186 1.866601 GCCCATTTGTGCAAAACAGTC 59.133 47.619 1.26 0.00 40.74 3.51
5625 6187 2.741228 GCCCATTTGTGCAAAACAGTCA 60.741 45.455 1.26 0.00 40.74 3.41
5628 6190 3.059461 CCATTTGTGCAAAACAGTCATGC 60.059 43.478 1.26 4.01 40.74 4.06
5636 6199 5.005740 TGCAAAACAGTCATGCTTATCTCT 58.994 37.500 10.83 0.00 40.66 3.10
5639 6202 6.569226 GCAAAACAGTCATGCTTATCTCTTGT 60.569 38.462 3.78 0.00 37.12 3.16
5642 6205 8.798859 AAACAGTCATGCTTATCTCTTGTTAT 57.201 30.769 0.00 0.00 0.00 1.89
5654 6218 9.645059 CTTATCTCTTGTTATCTGAAGTGTTCA 57.355 33.333 0.00 0.00 38.17 3.18
5661 6225 2.423926 TCTGAAGTGTTCACTCTCGC 57.576 50.000 5.91 0.00 35.46 5.03
5702 6266 8.723942 ATCTGAATTATCTGTGTGGAAAGTAC 57.276 34.615 0.00 0.00 0.00 2.73
5751 6349 8.556213 AACTTGTGTAGTTTGTGTTCTCTTAA 57.444 30.769 0.00 0.00 44.73 1.85
5752 6350 8.556213 ACTTGTGTAGTTTGTGTTCTCTTAAA 57.444 30.769 0.00 0.00 31.29 1.52
5758 6356 9.826574 TGTAGTTTGTGTTCTCTTAAATACTGT 57.173 29.630 0.00 0.00 0.00 3.55
5776 6374 9.654663 AAATACTGTAAAACTGTAGAGGATCAC 57.345 33.333 0.00 0.00 36.27 3.06
5777 6375 6.919775 ACTGTAAAACTGTAGAGGATCACT 57.080 37.500 0.00 0.00 37.82 3.41
5779 6377 7.155328 ACTGTAAAACTGTAGAGGATCACTTG 58.845 38.462 0.00 0.00 37.82 3.16
5780 6378 7.062749 TGTAAAACTGTAGAGGATCACTTGT 57.937 36.000 0.00 0.00 37.82 3.16
5781 6379 7.506114 TGTAAAACTGTAGAGGATCACTTGTT 58.494 34.615 0.00 0.00 37.82 2.83
5782 6380 6.867662 AAAACTGTAGAGGATCACTTGTTG 57.132 37.500 0.00 0.00 37.82 3.33
5785 6383 4.348168 ACTGTAGAGGATCACTTGTTGGTT 59.652 41.667 0.00 0.00 37.82 3.67
5787 6385 2.508526 AGAGGATCACTTGTTGGTTGC 58.491 47.619 0.00 0.00 37.82 4.17
5788 6386 2.107204 AGAGGATCACTTGTTGGTTGCT 59.893 45.455 0.00 0.00 37.82 3.91
5789 6387 2.887152 GAGGATCACTTGTTGGTTGCTT 59.113 45.455 0.00 0.00 33.17 3.91
5790 6388 3.299503 AGGATCACTTGTTGGTTGCTTT 58.700 40.909 0.00 0.00 0.00 3.51
5791 6389 3.706086 AGGATCACTTGTTGGTTGCTTTT 59.294 39.130 0.00 0.00 0.00 2.27
5792 6390 4.051237 GGATCACTTGTTGGTTGCTTTTC 58.949 43.478 0.00 0.00 0.00 2.29
5793 6391 4.441356 GGATCACTTGTTGGTTGCTTTTCA 60.441 41.667 0.00 0.00 0.00 2.69
5794 6392 3.843999 TCACTTGTTGGTTGCTTTTCAC 58.156 40.909 0.00 0.00 0.00 3.18
5795 6393 2.929398 CACTTGTTGGTTGCTTTTCACC 59.071 45.455 0.00 0.00 0.00 4.02
5797 6395 3.260632 ACTTGTTGGTTGCTTTTCACCTT 59.739 39.130 0.00 0.00 0.00 3.50
5798 6396 3.971245 TGTTGGTTGCTTTTCACCTTT 57.029 38.095 0.00 0.00 0.00 3.11
5800 6398 4.646572 TGTTGGTTGCTTTTCACCTTTTT 58.353 34.783 0.00 0.00 0.00 1.94
5832 6430 8.690203 TGCATTATTATGGTATAAAGCACTGT 57.310 30.769 0.00 0.00 38.82 3.55
5833 6431 8.567104 TGCATTATTATGGTATAAAGCACTGTG 58.433 33.333 2.76 2.76 38.82 3.66
5834 6432 8.023128 GCATTATTATGGTATAAAGCACTGTGG 58.977 37.037 10.21 0.00 35.72 4.17
5836 6434 5.444744 TTATGGTATAAAGCACTGTGGGT 57.555 39.130 10.21 0.00 35.57 4.51
5837 6435 3.799432 TGGTATAAAGCACTGTGGGTT 57.201 42.857 10.21 0.00 0.00 4.11
5838 6436 3.681593 TGGTATAAAGCACTGTGGGTTC 58.318 45.455 10.21 0.00 0.00 3.62
5839 6437 3.073209 TGGTATAAAGCACTGTGGGTTCA 59.927 43.478 10.21 0.00 0.00 3.18
5840 6438 4.263727 TGGTATAAAGCACTGTGGGTTCAT 60.264 41.667 10.21 0.00 0.00 2.57
5841 6439 4.705023 GGTATAAAGCACTGTGGGTTCATT 59.295 41.667 10.21 0.00 0.00 2.57
5842 6440 5.883673 GGTATAAAGCACTGTGGGTTCATTA 59.116 40.000 10.21 0.00 0.00 1.90
5843 6441 6.038271 GGTATAAAGCACTGTGGGTTCATTAG 59.962 42.308 10.21 0.00 0.00 1.73
5847 6445 2.095059 GCACTGTGGGTTCATTAGCTTG 60.095 50.000 10.21 0.00 0.00 4.01
5848 6446 2.095059 CACTGTGGGTTCATTAGCTTGC 60.095 50.000 0.00 0.00 0.00 4.01
5849 6447 2.161855 CTGTGGGTTCATTAGCTTGCA 58.838 47.619 0.00 0.00 0.00 4.08
5850 6448 2.557924 CTGTGGGTTCATTAGCTTGCAA 59.442 45.455 0.00 0.00 0.00 4.08
5852 6450 2.819608 GTGGGTTCATTAGCTTGCAAGA 59.180 45.455 30.39 9.86 0.00 3.02
5853 6451 3.255642 GTGGGTTCATTAGCTTGCAAGAA 59.744 43.478 30.39 16.37 0.00 2.52
5854 6452 4.082026 GTGGGTTCATTAGCTTGCAAGAAT 60.082 41.667 30.39 17.91 0.00 2.40
5855 6453 4.082081 TGGGTTCATTAGCTTGCAAGAATG 60.082 41.667 30.39 26.92 0.00 2.67
5856 6454 4.158394 GGGTTCATTAGCTTGCAAGAATGA 59.842 41.667 30.39 28.48 36.71 2.57
5857 6455 5.338365 GGTTCATTAGCTTGCAAGAATGAG 58.662 41.667 28.33 17.59 38.98 2.90
5859 6457 4.592942 TCATTAGCTTGCAAGAATGAGGT 58.407 39.130 30.39 10.72 34.27 3.85
5860 6458 5.012239 TCATTAGCTTGCAAGAATGAGGTT 58.988 37.500 30.39 2.30 34.27 3.50
5861 6459 5.477984 TCATTAGCTTGCAAGAATGAGGTTT 59.522 36.000 30.39 5.55 34.27 3.27
5862 6460 6.658816 TCATTAGCTTGCAAGAATGAGGTTTA 59.341 34.615 30.39 11.10 34.27 2.01
5865 6463 6.350629 AGCTTGCAAGAATGAGGTTTATTT 57.649 33.333 30.39 0.00 0.00 1.40
5867 6465 6.870439 AGCTTGCAAGAATGAGGTTTATTTTC 59.130 34.615 30.39 5.69 0.00 2.29
5868 6466 6.870439 GCTTGCAAGAATGAGGTTTATTTTCT 59.130 34.615 30.39 0.00 0.00 2.52
5870 6468 7.523293 TGCAAGAATGAGGTTTATTTTCTGA 57.477 32.000 0.00 0.00 0.00 3.27
5871 6469 7.596494 TGCAAGAATGAGGTTTATTTTCTGAG 58.404 34.615 0.00 0.00 0.00 3.35
5874 6472 5.355350 AGAATGAGGTTTATTTTCTGAGCCG 59.645 40.000 0.00 0.00 0.00 5.52
5876 6474 2.683362 GAGGTTTATTTTCTGAGCCGGG 59.317 50.000 2.18 0.00 0.00 5.73
5877 6475 1.134367 GGTTTATTTTCTGAGCCGGGC 59.866 52.381 12.11 12.11 0.00 6.13
5878 6476 2.092323 GTTTATTTTCTGAGCCGGGCT 58.908 47.619 24.13 24.13 43.88 5.19
5880 6478 3.857157 TTATTTTCTGAGCCGGGCTAT 57.143 42.857 23.92 13.19 39.88 2.97
5881 6479 1.972872 ATTTTCTGAGCCGGGCTATG 58.027 50.000 23.92 17.32 39.88 2.23
5882 6480 0.908910 TTTTCTGAGCCGGGCTATGA 59.091 50.000 23.92 19.39 39.88 2.15
5883 6481 0.908910 TTTCTGAGCCGGGCTATGAA 59.091 50.000 23.92 23.74 39.88 2.57
5884 6482 0.178068 TTCTGAGCCGGGCTATGAAC 59.822 55.000 23.92 9.78 39.88 3.18
5885 6483 0.975556 TCTGAGCCGGGCTATGAACA 60.976 55.000 23.92 14.24 39.88 3.18
5886 6484 0.531532 CTGAGCCGGGCTATGAACAG 60.532 60.000 23.92 19.84 39.88 3.16
5887 6485 1.264749 TGAGCCGGGCTATGAACAGT 61.265 55.000 23.92 0.00 39.88 3.55
5888 6486 0.750850 GAGCCGGGCTATGAACAGTA 59.249 55.000 23.92 0.00 39.88 2.74
5889 6487 0.753262 AGCCGGGCTATGAACAGTAG 59.247 55.000 22.47 0.00 36.99 2.57
5890 6488 0.249911 GCCGGGCTATGAACAGTAGG 60.250 60.000 12.87 0.00 0.00 3.18
5891 6489 0.393077 CCGGGCTATGAACAGTAGGG 59.607 60.000 0.00 0.00 0.00 3.53
5892 6490 0.249911 CGGGCTATGAACAGTAGGGC 60.250 60.000 0.00 0.00 0.00 5.19
5893 6491 1.132500 GGGCTATGAACAGTAGGGCT 58.868 55.000 0.00 0.00 0.00 5.19
5894 6492 1.490910 GGGCTATGAACAGTAGGGCTT 59.509 52.381 0.00 0.00 0.00 4.35
5895 6493 2.565841 GGCTATGAACAGTAGGGCTTG 58.434 52.381 0.00 0.00 0.00 4.01
5896 6494 2.170607 GGCTATGAACAGTAGGGCTTGA 59.829 50.000 0.00 0.00 0.00 3.02
5897 6495 3.198872 GCTATGAACAGTAGGGCTTGAC 58.801 50.000 0.00 0.00 0.00 3.18
5898 6496 3.369471 GCTATGAACAGTAGGGCTTGACA 60.369 47.826 0.00 0.00 0.00 3.58
5914 6512 0.667184 GACACATTTTGCCCGGCTTG 60.667 55.000 11.61 5.89 0.00 4.01
5918 6516 0.950071 CATTTTGCCCGGCTTGTTGG 60.950 55.000 11.61 0.00 0.00 3.77
5928 6526 0.392461 GGCTTGTTGGCGACTGGATA 60.392 55.000 6.41 0.00 0.00 2.59
5929 6527 1.668419 GCTTGTTGGCGACTGGATAT 58.332 50.000 6.41 0.00 0.00 1.63
5930 6528 1.599542 GCTTGTTGGCGACTGGATATC 59.400 52.381 6.41 0.00 0.00 1.63
5931 6529 2.905075 CTTGTTGGCGACTGGATATCA 58.095 47.619 6.41 0.00 0.00 2.15
5944 6542 4.316645 CTGGATATCAGCAGATTGTCAGG 58.683 47.826 4.83 0.00 36.60 3.86
5983 6593 0.251341 AGTGCAAACTGGCCTTAGGG 60.251 55.000 3.32 0.00 0.00 3.53
5984 6594 0.539669 GTGCAAACTGGCCTTAGGGT 60.540 55.000 3.32 0.00 34.45 4.34
6002 6645 3.405093 TATTGCTGCTGCTCCGGGG 62.405 63.158 17.00 0.00 40.48 5.73
6008 6651 4.554036 GCTGCTCCGGGGATGGAC 62.554 72.222 4.80 0.00 33.48 4.02
6014 6657 2.124320 CCGGGGATGGACGCAAAT 60.124 61.111 0.00 0.00 0.00 2.32
6018 6661 1.728490 GGGGATGGACGCAAATCTGC 61.728 60.000 0.00 0.00 45.75 4.26
6040 6683 1.271379 GCTGTATGGTTGTGGTGGAGT 60.271 52.381 0.00 0.00 0.00 3.85
6107 6751 1.867233 CCTTCTGTGAAGTTGTCGGTG 59.133 52.381 6.57 0.00 0.00 4.94
6109 6753 0.176910 TCTGTGAAGTTGTCGGTGCA 59.823 50.000 0.00 0.00 0.00 4.57
6111 6755 1.603802 CTGTGAAGTTGTCGGTGCATT 59.396 47.619 0.00 0.00 0.00 3.56
6112 6756 2.020720 TGTGAAGTTGTCGGTGCATTT 58.979 42.857 0.00 0.00 0.00 2.32
6144 6788 0.449388 GGTGCCAATTCTGAAGAGCG 59.551 55.000 0.00 0.00 0.00 5.03
6145 6789 1.442769 GTGCCAATTCTGAAGAGCGA 58.557 50.000 0.00 0.00 0.00 4.93
6149 6793 2.286067 GCCAATTCTGAAGAGCGAATCG 60.286 50.000 0.00 0.00 0.00 3.34
6180 6829 2.359169 GGGTCGTCTCCAGATGCCA 61.359 63.158 9.89 0.00 32.53 4.92
6181 6830 1.596934 GGTCGTCTCCAGATGCCAA 59.403 57.895 5.05 0.00 31.79 4.52
6182 6831 0.460987 GGTCGTCTCCAGATGCCAAG 60.461 60.000 5.05 0.00 31.79 3.61
6183 6832 1.086634 GTCGTCTCCAGATGCCAAGC 61.087 60.000 0.00 0.00 0.00 4.01
6184 6833 1.220206 CGTCTCCAGATGCCAAGCT 59.780 57.895 0.00 0.00 0.00 3.74
6185 6834 0.809241 CGTCTCCAGATGCCAAGCTC 60.809 60.000 0.00 0.00 0.00 4.09
6186 6835 0.251354 GTCTCCAGATGCCAAGCTCA 59.749 55.000 0.00 0.00 0.00 4.26
6188 6837 1.077930 TCCAGATGCCAAGCTCAGC 60.078 57.895 0.00 0.00 0.00 4.26
6189 6838 2.119655 CCAGATGCCAAGCTCAGCC 61.120 63.158 0.00 0.00 0.00 4.85
6190 6839 2.119655 CAGATGCCAAGCTCAGCCC 61.120 63.158 0.00 0.00 0.00 5.19
6229 6885 3.777925 CGTCGCTTTCTGCCCGTG 61.778 66.667 0.00 0.00 38.78 4.94
6261 6926 2.579738 GGCGGAGTCCCTGAAGAC 59.420 66.667 2.80 0.00 37.01 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 2.355126 TAGCTAGCTCGCATGCGC 60.355 61.111 34.45 21.69 39.59 6.09
4 5 2.371158 GCTAGCTAGCTCGCATGCG 61.371 63.158 33.71 33.61 45.62 4.73
5 6 3.548280 GCTAGCTAGCTCGCATGC 58.452 61.111 33.71 19.33 45.62 4.06
27 28 0.170561 AACTAGCTAGTCCGTGTGCG 59.829 55.000 26.21 0.00 34.99 5.34
28 29 2.795331 GCTAACTAGCTAGTCCGTGTGC 60.795 54.545 26.21 18.16 45.62 4.57
29 30 3.067721 GCTAACTAGCTAGTCCGTGTG 57.932 52.381 26.21 13.27 45.62 3.82
41 42 1.884926 GCGGCCAGCTGCTAACTAG 60.885 63.158 16.15 0.00 44.39 2.57
42 43 2.186903 GCGGCCAGCTGCTAACTA 59.813 61.111 16.15 0.00 44.39 2.24
51 52 4.865761 CATGCATGTGCGGCCAGC 62.866 66.667 18.91 8.23 45.83 4.85
52 53 4.865761 GCATGCATGTGCGGCCAG 62.866 66.667 26.79 0.00 45.83 4.85
58 59 1.805539 CAGCTGTGCATGCATGTGC 60.806 57.895 25.64 25.19 45.25 4.57
59 60 4.476361 CAGCTGTGCATGCATGTG 57.524 55.556 25.64 17.17 0.00 3.21
78 79 3.488090 GCTACAACGGCGAGCACC 61.488 66.667 16.62 0.00 36.20 5.01
79 80 2.432628 AGCTACAACGGCGAGCAC 60.433 61.111 16.62 0.00 38.73 4.40
80 81 2.126071 GAGCTACAACGGCGAGCA 60.126 61.111 16.62 0.00 38.73 4.26
81 82 3.248171 CGAGCTACAACGGCGAGC 61.248 66.667 16.62 12.68 36.42 5.03
82 83 3.248171 GCGAGCTACAACGGCGAG 61.248 66.667 16.62 8.41 34.52 5.03
159 160 4.853050 AGATGCAGCAGGGCGAGC 62.853 66.667 4.07 0.00 36.28 5.03
160 161 2.588314 GAGATGCAGCAGGGCGAG 60.588 66.667 4.07 0.00 36.28 5.03
161 162 4.519437 CGAGATGCAGCAGGGCGA 62.519 66.667 4.07 0.00 36.28 5.54
180 181 4.473520 AGCTCGAACCCCATGCCG 62.474 66.667 0.00 0.00 0.00 5.69
181 182 2.514824 GAGCTCGAACCCCATGCC 60.515 66.667 0.00 0.00 0.00 4.40
182 183 2.892425 CGAGCTCGAACCCCATGC 60.892 66.667 32.06 0.00 43.02 4.06
183 184 2.892640 TCGAGCTCGAACCCCATG 59.107 61.111 35.16 4.66 46.30 3.66
242 243 2.505118 GTCGACGTCTGCAGGAGC 60.505 66.667 15.13 3.84 42.57 4.70
243 244 2.179517 GGTCGACGTCTGCAGGAG 59.820 66.667 15.13 10.77 0.00 3.69
244 245 2.282251 AGGTCGACGTCTGCAGGA 60.282 61.111 15.13 0.00 0.00 3.86
245 246 2.179517 GAGGTCGACGTCTGCAGG 59.820 66.667 26.59 0.36 0.00 4.85
246 247 2.202362 CGAGGTCGACGTCTGCAG 60.202 66.667 29.36 7.63 43.02 4.41
247 248 4.400109 GCGAGGTCGACGTCTGCA 62.400 66.667 30.94 0.00 43.02 4.41
286 287 2.765807 TAGCAGGCAGGGGAGCTC 60.766 66.667 4.71 4.71 38.47 4.09
287 288 3.086600 GTAGCAGGCAGGGGAGCT 61.087 66.667 0.00 0.00 40.92 4.09
288 289 4.537433 CGTAGCAGGCAGGGGAGC 62.537 72.222 0.00 0.00 0.00 4.70
289 290 3.077556 ACGTAGCAGGCAGGGGAG 61.078 66.667 0.00 0.00 0.00 4.30
290 291 3.390521 CACGTAGCAGGCAGGGGA 61.391 66.667 0.00 0.00 0.00 4.81
291 292 2.748058 AAACACGTAGCAGGCAGGGG 62.748 60.000 0.00 0.00 0.00 4.79
292 293 1.302511 AAACACGTAGCAGGCAGGG 60.303 57.895 0.00 0.00 0.00 4.45
293 294 0.602638 TCAAACACGTAGCAGGCAGG 60.603 55.000 0.00 0.00 0.00 4.85
294 295 1.225855 TTCAAACACGTAGCAGGCAG 58.774 50.000 0.00 0.00 0.00 4.85
295 296 1.669604 TTTCAAACACGTAGCAGGCA 58.330 45.000 0.00 0.00 0.00 4.75
296 297 2.766970 TTTTCAAACACGTAGCAGGC 57.233 45.000 0.00 0.00 0.00 4.85
320 321 1.606885 ATTTTCACATGCCGCCCTGG 61.607 55.000 0.00 0.00 42.50 4.45
321 322 0.247185 AATTTTCACATGCCGCCCTG 59.753 50.000 0.00 0.00 0.00 4.45
322 323 0.247185 CAATTTTCACATGCCGCCCT 59.753 50.000 0.00 0.00 0.00 5.19
323 324 0.740516 CCAATTTTCACATGCCGCCC 60.741 55.000 0.00 0.00 0.00 6.13
324 325 0.740516 CCCAATTTTCACATGCCGCC 60.741 55.000 0.00 0.00 0.00 6.13
325 326 0.037419 ACCCAATTTTCACATGCCGC 60.037 50.000 0.00 0.00 0.00 6.53
326 327 1.545582 AGACCCAATTTTCACATGCCG 59.454 47.619 0.00 0.00 0.00 5.69
327 328 2.562298 TCAGACCCAATTTTCACATGCC 59.438 45.455 0.00 0.00 0.00 4.40
328 329 3.256631 AGTCAGACCCAATTTTCACATGC 59.743 43.478 0.00 0.00 0.00 4.06
329 330 4.801891 CAGTCAGACCCAATTTTCACATG 58.198 43.478 0.00 0.00 0.00 3.21
330 331 3.256631 GCAGTCAGACCCAATTTTCACAT 59.743 43.478 0.00 0.00 0.00 3.21
331 332 2.622942 GCAGTCAGACCCAATTTTCACA 59.377 45.455 0.00 0.00 0.00 3.58
332 333 2.622942 TGCAGTCAGACCCAATTTTCAC 59.377 45.455 0.00 0.00 0.00 3.18
333 334 2.886523 CTGCAGTCAGACCCAATTTTCA 59.113 45.455 5.25 0.00 42.95 2.69
334 335 2.887152 ACTGCAGTCAGACCCAATTTTC 59.113 45.455 15.25 0.00 42.95 2.29
335 336 2.949447 ACTGCAGTCAGACCCAATTTT 58.051 42.857 15.25 0.00 42.95 1.82
336 337 2.664402 ACTGCAGTCAGACCCAATTT 57.336 45.000 15.25 0.00 42.95 1.82
337 338 2.664402 AACTGCAGTCAGACCCAATT 57.336 45.000 21.95 0.00 42.95 2.32
338 339 2.026822 CCTAACTGCAGTCAGACCCAAT 60.027 50.000 21.95 3.19 42.95 3.16
339 340 1.347707 CCTAACTGCAGTCAGACCCAA 59.652 52.381 21.95 0.00 42.95 4.12
340 341 0.976641 CCTAACTGCAGTCAGACCCA 59.023 55.000 21.95 0.00 42.95 4.51
341 342 0.391793 GCCTAACTGCAGTCAGACCC 60.392 60.000 21.95 3.18 42.95 4.46
342 343 0.321671 TGCCTAACTGCAGTCAGACC 59.678 55.000 21.95 10.09 42.95 3.85
343 344 1.270305 TGTGCCTAACTGCAGTCAGAC 60.270 52.381 21.95 8.35 43.02 3.51
344 345 1.047801 TGTGCCTAACTGCAGTCAGA 58.952 50.000 21.95 9.49 43.02 3.27
345 346 1.151668 GTGTGCCTAACTGCAGTCAG 58.848 55.000 21.95 15.96 43.02 3.51
346 347 0.250295 GGTGTGCCTAACTGCAGTCA 60.250 55.000 21.95 11.08 43.02 3.41
347 348 1.291877 CGGTGTGCCTAACTGCAGTC 61.292 60.000 21.95 8.17 43.02 3.51
348 349 1.301716 CGGTGTGCCTAACTGCAGT 60.302 57.895 15.25 15.25 43.02 4.40
349 350 2.034879 CCGGTGTGCCTAACTGCAG 61.035 63.158 13.48 13.48 43.02 4.41
350 351 2.031919 CCGGTGTGCCTAACTGCA 59.968 61.111 0.00 0.00 39.37 4.41
351 352 3.431725 GCCGGTGTGCCTAACTGC 61.432 66.667 1.90 0.00 0.00 4.40
352 353 2.031919 TGCCGGTGTGCCTAACTG 59.968 61.111 1.90 0.00 0.00 3.16
353 354 2.214216 TCTGCCGGTGTGCCTAACT 61.214 57.895 1.90 0.00 0.00 2.24
354 355 2.033194 GTCTGCCGGTGTGCCTAAC 61.033 63.158 1.90 0.00 0.00 2.34
355 356 2.345991 GTCTGCCGGTGTGCCTAA 59.654 61.111 1.90 0.00 0.00 2.69
356 357 3.702048 GGTCTGCCGGTGTGCCTA 61.702 66.667 1.90 0.00 0.00 3.93
359 360 4.947147 TTGGGTCTGCCGGTGTGC 62.947 66.667 1.90 0.00 34.97 4.57
360 361 1.603455 ATTTGGGTCTGCCGGTGTG 60.603 57.895 1.90 0.00 34.97 3.82
361 362 1.603455 CATTTGGGTCTGCCGGTGT 60.603 57.895 1.90 0.00 34.97 4.16
362 363 0.893270 TTCATTTGGGTCTGCCGGTG 60.893 55.000 1.90 0.00 34.97 4.94
363 364 0.178975 TTTCATTTGGGTCTGCCGGT 60.179 50.000 1.90 0.00 34.97 5.28
364 365 0.965439 TTTTCATTTGGGTCTGCCGG 59.035 50.000 0.00 0.00 34.97 6.13
365 366 2.676076 CTTTTTCATTTGGGTCTGCCG 58.324 47.619 0.00 0.00 34.97 5.69
366 367 2.416747 GCTTTTTCATTTGGGTCTGCC 58.583 47.619 0.00 0.00 0.00 4.85
367 368 2.061028 CGCTTTTTCATTTGGGTCTGC 58.939 47.619 0.00 0.00 0.00 4.26
368 369 2.295909 TCCGCTTTTTCATTTGGGTCTG 59.704 45.455 0.00 0.00 0.00 3.51
369 370 2.296190 GTCCGCTTTTTCATTTGGGTCT 59.704 45.455 0.00 0.00 0.00 3.85
370 371 2.035321 TGTCCGCTTTTTCATTTGGGTC 59.965 45.455 0.00 0.00 0.00 4.46
371 372 2.035632 TGTCCGCTTTTTCATTTGGGT 58.964 42.857 0.00 0.00 0.00 4.51
372 373 2.810439 TGTCCGCTTTTTCATTTGGG 57.190 45.000 0.00 0.00 0.00 4.12
373 374 3.868077 TGTTTGTCCGCTTTTTCATTTGG 59.132 39.130 0.00 0.00 0.00 3.28
374 375 4.547966 CGTGTTTGTCCGCTTTTTCATTTG 60.548 41.667 0.00 0.00 0.00 2.32
375 376 3.549873 CGTGTTTGTCCGCTTTTTCATTT 59.450 39.130 0.00 0.00 0.00 2.32
376 377 3.112580 CGTGTTTGTCCGCTTTTTCATT 58.887 40.909 0.00 0.00 0.00 2.57
377 378 2.098443 ACGTGTTTGTCCGCTTTTTCAT 59.902 40.909 0.00 0.00 0.00 2.57
378 379 1.469308 ACGTGTTTGTCCGCTTTTTCA 59.531 42.857 0.00 0.00 0.00 2.69
379 380 2.106418 GACGTGTTTGTCCGCTTTTTC 58.894 47.619 0.00 0.00 32.61 2.29
380 381 2.182904 GACGTGTTTGTCCGCTTTTT 57.817 45.000 0.00 0.00 32.61 1.94
381 382 3.909957 GACGTGTTTGTCCGCTTTT 57.090 47.368 0.00 0.00 32.61 2.27
388 389 2.244382 CGTGCGGACGTGTTTGTC 59.756 61.111 22.12 0.00 40.91 3.18
389 390 3.266376 CCGTGCGGACGTGTTTGT 61.266 61.111 27.59 0.00 44.54 2.83
390 391 4.659874 GCCGTGCGGACGTGTTTG 62.660 66.667 27.59 13.17 44.54 2.93
391 392 4.903010 AGCCGTGCGGACGTGTTT 62.903 61.111 27.59 7.52 44.54 2.83
394 395 3.693382 TATCAGCCGTGCGGACGTG 62.693 63.158 27.59 19.86 44.54 4.49
395 396 3.445687 TATCAGCCGTGCGGACGT 61.446 61.111 27.59 11.64 44.54 4.34
396 397 2.954868 GTATCAGCCGTGCGGACG 60.955 66.667 23.45 23.45 45.67 4.79
397 398 1.017177 TTTGTATCAGCCGTGCGGAC 61.017 55.000 15.45 0.00 35.39 4.79
398 399 0.107897 ATTTGTATCAGCCGTGCGGA 60.108 50.000 15.45 0.00 37.15 5.54
399 400 0.027979 CATTTGTATCAGCCGTGCGG 59.972 55.000 6.22 6.22 38.57 5.69
400 401 0.027979 CCATTTGTATCAGCCGTGCG 59.972 55.000 0.00 0.00 0.00 5.34
401 402 1.064060 GTCCATTTGTATCAGCCGTGC 59.936 52.381 0.00 0.00 0.00 5.34
402 403 2.355197 TGTCCATTTGTATCAGCCGTG 58.645 47.619 0.00 0.00 0.00 4.94
403 404 2.779755 TGTCCATTTGTATCAGCCGT 57.220 45.000 0.00 0.00 0.00 5.68
404 405 4.433186 TTTTGTCCATTTGTATCAGCCG 57.567 40.909 0.00 0.00 0.00 5.52
405 406 5.351458 GGATTTTGTCCATTTGTATCAGCC 58.649 41.667 0.00 0.00 46.96 4.85
418 419 1.790755 GTTTTGCCCGGATTTTGTCC 58.209 50.000 0.73 0.00 44.10 4.02
419 420 1.269361 ACGTTTTGCCCGGATTTTGTC 60.269 47.619 0.73 0.00 0.00 3.18
420 421 0.747852 ACGTTTTGCCCGGATTTTGT 59.252 45.000 0.73 0.00 0.00 2.83
421 422 1.135867 CACGTTTTGCCCGGATTTTG 58.864 50.000 0.73 0.00 0.00 2.44
422 423 0.598942 GCACGTTTTGCCCGGATTTT 60.599 50.000 0.73 0.00 46.63 1.82
423 424 1.006688 GCACGTTTTGCCCGGATTT 60.007 52.632 0.73 0.00 46.63 2.17
424 425 2.648454 GCACGTTTTGCCCGGATT 59.352 55.556 0.73 0.00 46.63 3.01
438 439 2.660612 CGGACCCAAACGTACGCAC 61.661 63.158 16.72 0.00 32.38 5.34
439 440 2.356075 CGGACCCAAACGTACGCA 60.356 61.111 16.72 0.00 32.38 5.24
440 441 2.356194 ACGGACCCAAACGTACGC 60.356 61.111 16.72 0.00 44.21 4.42
441 442 2.023223 CCACGGACCCAAACGTACG 61.023 63.158 15.01 15.01 45.89 3.67
442 443 1.668793 CCCACGGACCCAAACGTAC 60.669 63.158 0.00 0.00 42.04 3.67
443 444 1.694133 AACCCACGGACCCAAACGTA 61.694 55.000 0.00 0.00 42.04 3.57
444 445 3.046536 AACCCACGGACCCAAACGT 62.047 57.895 0.00 0.00 45.25 3.99
445 446 2.203238 AACCCACGGACCCAAACG 60.203 61.111 0.00 0.00 0.00 3.60
446 447 0.752376 TTCAACCCACGGACCCAAAC 60.752 55.000 0.00 0.00 0.00 2.93
447 448 0.466555 CTTCAACCCACGGACCCAAA 60.467 55.000 0.00 0.00 0.00 3.28
448 449 1.149627 CTTCAACCCACGGACCCAA 59.850 57.895 0.00 0.00 0.00 4.12
449 450 1.637724 AACTTCAACCCACGGACCCA 61.638 55.000 0.00 0.00 0.00 4.51
450 451 1.149854 AACTTCAACCCACGGACCC 59.850 57.895 0.00 0.00 0.00 4.46
451 452 1.792118 GCAACTTCAACCCACGGACC 61.792 60.000 0.00 0.00 0.00 4.46
452 453 0.818040 AGCAACTTCAACCCACGGAC 60.818 55.000 0.00 0.00 0.00 4.79
453 454 0.534203 GAGCAACTTCAACCCACGGA 60.534 55.000 0.00 0.00 0.00 4.69
454 455 0.535102 AGAGCAACTTCAACCCACGG 60.535 55.000 0.00 0.00 0.00 4.94
455 456 2.163818 TAGAGCAACTTCAACCCACG 57.836 50.000 0.00 0.00 0.00 4.94
456 457 2.226674 GCTTAGAGCAACTTCAACCCAC 59.773 50.000 0.00 0.00 41.89 4.61
457 458 2.504367 GCTTAGAGCAACTTCAACCCA 58.496 47.619 0.00 0.00 41.89 4.51
469 470 5.908341 ACTAAGATGTAAGGTGCTTAGAGC 58.092 41.667 13.54 0.00 41.28 4.09
482 483 9.071276 CCCTCCGTAAACTAATACTAAGATGTA 57.929 37.037 0.00 0.00 0.00 2.29
483 484 7.781693 TCCCTCCGTAAACTAATACTAAGATGT 59.218 37.037 0.00 0.00 0.00 3.06
484 485 8.174733 TCCCTCCGTAAACTAATACTAAGATG 57.825 38.462 0.00 0.00 0.00 2.90
485 486 8.003629 ACTCCCTCCGTAAACTAATACTAAGAT 58.996 37.037 0.00 0.00 0.00 2.40
486 487 7.349598 ACTCCCTCCGTAAACTAATACTAAGA 58.650 38.462 0.00 0.00 0.00 2.10
487 488 7.579761 ACTCCCTCCGTAAACTAATACTAAG 57.420 40.000 0.00 0.00 0.00 2.18
490 491 9.294614 CTTATACTCCCTCCGTAAACTAATACT 57.705 37.037 0.00 0.00 0.00 2.12
491 492 8.518702 CCTTATACTCCCTCCGTAAACTAATAC 58.481 40.741 0.00 0.00 0.00 1.89
492 493 8.227507 ACCTTATACTCCCTCCGTAAACTAATA 58.772 37.037 0.00 0.00 0.00 0.98
493 494 7.071917 ACCTTATACTCCCTCCGTAAACTAAT 58.928 38.462 0.00 0.00 0.00 1.73
494 495 6.435164 ACCTTATACTCCCTCCGTAAACTAA 58.565 40.000 0.00 0.00 0.00 2.24
495 496 6.018433 ACCTTATACTCCCTCCGTAAACTA 57.982 41.667 0.00 0.00 0.00 2.24
496 497 4.876580 ACCTTATACTCCCTCCGTAAACT 58.123 43.478 0.00 0.00 0.00 2.66
497 498 5.604758 AACCTTATACTCCCTCCGTAAAC 57.395 43.478 0.00 0.00 0.00 2.01
498 499 6.268387 CCATAACCTTATACTCCCTCCGTAAA 59.732 42.308 0.00 0.00 0.00 2.01
499 500 5.776716 CCATAACCTTATACTCCCTCCGTAA 59.223 44.000 0.00 0.00 0.00 3.18
500 501 5.327732 CCATAACCTTATACTCCCTCCGTA 58.672 45.833 0.00 0.00 0.00 4.02
501 502 4.158015 CCATAACCTTATACTCCCTCCGT 58.842 47.826 0.00 0.00 0.00 4.69
502 503 3.514309 CCCATAACCTTATACTCCCTCCG 59.486 52.174 0.00 0.00 0.00 4.63
503 504 3.263681 GCCCATAACCTTATACTCCCTCC 59.736 52.174 0.00 0.00 0.00 4.30
504 505 3.056035 CGCCCATAACCTTATACTCCCTC 60.056 52.174 0.00 0.00 0.00 4.30
505 506 2.904434 CGCCCATAACCTTATACTCCCT 59.096 50.000 0.00 0.00 0.00 4.20
506 507 2.614734 GCGCCCATAACCTTATACTCCC 60.615 54.545 0.00 0.00 0.00 4.30
507 508 2.614734 GGCGCCCATAACCTTATACTCC 60.615 54.545 18.11 0.00 0.00 3.85
508 509 2.696506 GGCGCCCATAACCTTATACTC 58.303 52.381 18.11 0.00 0.00 2.59
509 510 1.001633 CGGCGCCCATAACCTTATACT 59.998 52.381 23.46 0.00 0.00 2.12
510 511 1.270465 ACGGCGCCCATAACCTTATAC 60.270 52.381 23.46 0.00 0.00 1.47
511 512 1.050204 ACGGCGCCCATAACCTTATA 58.950 50.000 23.46 0.00 0.00 0.98
512 513 0.181824 AACGGCGCCCATAACCTTAT 59.818 50.000 23.46 0.00 0.00 1.73
513 514 0.035247 AAACGGCGCCCATAACCTTA 60.035 50.000 23.46 0.00 0.00 2.69
514 515 0.035247 TAAACGGCGCCCATAACCTT 60.035 50.000 23.46 6.20 0.00 3.50
515 516 0.181824 ATAAACGGCGCCCATAACCT 59.818 50.000 23.46 0.62 0.00 3.50
516 517 0.309612 CATAAACGGCGCCCATAACC 59.690 55.000 23.46 0.00 0.00 2.85
517 518 1.301423 TCATAAACGGCGCCCATAAC 58.699 50.000 23.46 0.00 0.00 1.89
518 519 2.039818 TTCATAAACGGCGCCCATAA 57.960 45.000 23.46 4.51 0.00 1.90
519 520 2.039818 TTTCATAAACGGCGCCCATA 57.960 45.000 23.46 12.03 0.00 2.74
520 521 1.066908 CATTTCATAAACGGCGCCCAT 59.933 47.619 23.46 6.41 0.00 4.00
521 522 0.453793 CATTTCATAAACGGCGCCCA 59.546 50.000 23.46 3.66 0.00 5.36
522 523 0.869880 GCATTTCATAAACGGCGCCC 60.870 55.000 23.46 2.84 0.00 6.13
523 524 0.869880 GGCATTTCATAAACGGCGCC 60.870 55.000 19.07 19.07 0.00 6.53
524 525 1.199852 CGGCATTTCATAAACGGCGC 61.200 55.000 6.90 0.00 38.81 6.53
525 526 0.591236 CCGGCATTTCATAAACGGCG 60.591 55.000 4.80 4.80 44.26 6.46
526 527 0.454196 ACCGGCATTTCATAAACGGC 59.546 50.000 0.00 0.00 44.73 5.68
527 528 4.083696 GGTATACCGGCATTTCATAAACGG 60.084 45.833 6.06 0.00 46.16 4.44
528 529 4.083696 GGGTATACCGGCATTTCATAAACG 60.084 45.833 15.80 0.00 36.71 3.60
529 530 4.822896 TGGGTATACCGGCATTTCATAAAC 59.177 41.667 15.80 0.00 44.64 2.01
530 531 4.822896 GTGGGTATACCGGCATTTCATAAA 59.177 41.667 15.80 0.00 44.64 1.40
531 532 4.391155 GTGGGTATACCGGCATTTCATAA 58.609 43.478 15.80 0.00 44.64 1.90
532 533 3.244630 GGTGGGTATACCGGCATTTCATA 60.245 47.826 15.80 0.00 44.64 2.15
533 534 2.488347 GGTGGGTATACCGGCATTTCAT 60.488 50.000 15.80 0.00 44.64 2.57
534 535 1.134037 GGTGGGTATACCGGCATTTCA 60.134 52.381 15.80 3.36 44.64 2.69
535 536 1.601166 GGTGGGTATACCGGCATTTC 58.399 55.000 15.80 0.62 44.64 2.17
536 537 0.184211 GGGTGGGTATACCGGCATTT 59.816 55.000 15.80 0.00 44.64 2.32
537 538 1.712000 GGGGTGGGTATACCGGCATT 61.712 60.000 15.80 0.00 44.64 3.56
538 539 2.151388 GGGGTGGGTATACCGGCAT 61.151 63.158 15.80 0.00 44.64 4.40
539 540 2.769195 GGGGTGGGTATACCGGCA 60.769 66.667 15.80 6.30 44.64 5.69
540 541 3.563224 GGGGGTGGGTATACCGGC 61.563 72.222 15.80 10.36 44.64 6.13
541 542 2.040674 TGGGGGTGGGTATACCGG 60.041 66.667 15.80 0.00 44.64 5.28
542 543 1.383525 ACTGGGGGTGGGTATACCG 60.384 63.158 15.80 1.92 44.64 4.02
543 544 1.058428 GGACTGGGGGTGGGTATACC 61.058 65.000 13.99 13.99 40.10 2.73
544 545 0.326808 TGGACTGGGGGTGGGTATAC 60.327 60.000 0.00 0.00 0.00 1.47
545 546 0.030501 CTGGACTGGGGGTGGGTATA 60.031 60.000 0.00 0.00 0.00 1.47
546 547 1.307866 CTGGACTGGGGGTGGGTAT 60.308 63.158 0.00 0.00 0.00 2.73
547 548 2.124085 CTGGACTGGGGGTGGGTA 59.876 66.667 0.00 0.00 0.00 3.69
548 549 4.202030 ACTGGACTGGGGGTGGGT 62.202 66.667 0.00 0.00 0.00 4.51
549 550 3.330720 GACTGGACTGGGGGTGGG 61.331 72.222 0.00 0.00 0.00 4.61
550 551 3.330720 GGACTGGACTGGGGGTGG 61.331 72.222 0.00 0.00 0.00 4.61
551 552 3.706373 CGGACTGGACTGGGGGTG 61.706 72.222 0.00 0.00 0.00 4.61
554 555 3.391382 GACCGGACTGGACTGGGG 61.391 72.222 9.46 0.00 42.00 4.96
555 556 2.603473 TGACCGGACTGGACTGGG 60.603 66.667 9.46 0.00 42.00 4.45
556 557 2.657237 GTGACCGGACTGGACTGG 59.343 66.667 9.46 0.00 42.00 4.00
557 558 2.657237 GGTGACCGGACTGGACTG 59.343 66.667 9.46 0.00 42.00 3.51
558 559 2.989824 CGGTGACCGGACTGGACT 60.990 66.667 17.80 0.00 44.15 3.85
591 592 0.538746 TGCAGTAGAGGTGGACGACA 60.539 55.000 0.00 0.00 0.00 4.35
594 595 0.248661 CGATGCAGTAGAGGTGGACG 60.249 60.000 0.00 0.00 0.00 4.79
628 632 0.314302 CCCTCTCGTTAATCGCCGAT 59.686 55.000 0.00 0.00 39.67 4.18
629 633 0.749091 TCCCTCTCGTTAATCGCCGA 60.749 55.000 0.00 0.00 39.67 5.54
794 802 2.900337 CCCGGCCGACCATAAAGC 60.900 66.667 30.73 0.00 34.57 3.51
983 994 1.467875 CATCGTCGAGTCAACCGATC 58.532 55.000 0.00 0.00 37.91 3.69
984 995 0.100682 CCATCGTCGAGTCAACCGAT 59.899 55.000 0.00 0.99 40.39 4.18
985 996 1.239296 ACCATCGTCGAGTCAACCGA 61.239 55.000 0.00 0.00 0.00 4.69
986 997 1.071019 CACCATCGTCGAGTCAACCG 61.071 60.000 0.00 0.00 0.00 4.44
1108 1119 2.214181 GAGAGAGACGGGAAAGCGCA 62.214 60.000 11.47 0.00 0.00 6.09
1109 1120 1.517475 GAGAGAGACGGGAAAGCGC 60.517 63.158 0.00 0.00 0.00 5.92
1113 1124 1.681327 CCGGGAGAGAGACGGGAAA 60.681 63.158 0.00 0.00 43.69 3.13
1114 1125 2.044252 CCGGGAGAGAGACGGGAA 60.044 66.667 0.00 0.00 43.69 3.97
1119 1130 0.175989 AAATTCGCCGGGAGAGAGAC 59.824 55.000 2.18 0.00 0.00 3.36
1121 1132 0.872021 CGAAATTCGCCGGGAGAGAG 60.872 60.000 2.18 0.00 31.14 3.20
1136 1161 1.438651 CAACCGGAATGAGAGCGAAA 58.561 50.000 9.46 0.00 0.00 3.46
1155 1180 1.433837 AACGACGACACCAGCAAACC 61.434 55.000 0.00 0.00 0.00 3.27
1156 1181 0.315869 CAACGACGACACCAGCAAAC 60.316 55.000 0.00 0.00 0.00 2.93
1157 1182 0.741574 ACAACGACGACACCAGCAAA 60.742 50.000 0.00 0.00 0.00 3.68
1158 1183 0.741574 AACAACGACGACACCAGCAA 60.742 50.000 0.00 0.00 0.00 3.91
1169 1194 1.544686 CCTGCAACAACAACAACGAC 58.455 50.000 0.00 0.00 0.00 4.34
1170 1195 0.179150 GCCTGCAACAACAACAACGA 60.179 50.000 0.00 0.00 0.00 3.85
1171 1196 1.470699 CGCCTGCAACAACAACAACG 61.471 55.000 0.00 0.00 0.00 4.10
1172 1197 1.751536 GCGCCTGCAACAACAACAAC 61.752 55.000 0.00 0.00 42.15 3.32
1173 1198 1.518133 GCGCCTGCAACAACAACAA 60.518 52.632 0.00 0.00 42.15 2.83
1174 1199 2.103934 GCGCCTGCAACAACAACA 59.896 55.556 0.00 0.00 42.15 3.33
1300 1331 1.279846 TGATGCTGATGCCTCACAAGA 59.720 47.619 0.00 0.00 38.56 3.02
1309 1347 3.490896 CAGATTTTGCATGATGCTGATGC 59.509 43.478 19.19 5.60 45.31 3.91
1333 1379 3.322369 CACTGTTGGCGATAGTTACACA 58.678 45.455 0.73 0.00 39.35 3.72
1334 1380 2.093783 GCACTGTTGGCGATAGTTACAC 59.906 50.000 0.73 0.00 39.35 2.90
1373 1419 4.877823 TCTGACACTTGCATAGCTAATTGG 59.122 41.667 0.00 0.00 0.00 3.16
1424 1482 5.122396 GTCTTACAGAGCACCGAATGAAAAT 59.878 40.000 0.00 0.00 0.00 1.82
1426 1484 3.994392 GTCTTACAGAGCACCGAATGAAA 59.006 43.478 0.00 0.00 0.00 2.69
1436 1494 1.541310 CCCACCCGTCTTACAGAGCA 61.541 60.000 0.00 0.00 0.00 4.26
1443 1501 3.443052 TGACTAAATCCCACCCGTCTTA 58.557 45.455 0.00 0.00 0.00 2.10
1447 1517 0.252197 GCTGACTAAATCCCACCCGT 59.748 55.000 0.00 0.00 0.00 5.28
1449 1519 2.808906 AAGCTGACTAAATCCCACCC 57.191 50.000 0.00 0.00 0.00 4.61
1450 1520 5.007682 TGTAAAAGCTGACTAAATCCCACC 58.992 41.667 0.00 0.00 0.00 4.61
1451 1521 6.404734 CCATGTAAAAGCTGACTAAATCCCAC 60.405 42.308 0.00 0.00 0.00 4.61
1452 1522 5.652014 CCATGTAAAAGCTGACTAAATCCCA 59.348 40.000 0.00 0.00 0.00 4.37
1563 1634 0.833949 CTGGAGAAGTTCCCCTAGGC 59.166 60.000 2.05 0.00 46.19 3.93
1623 1694 1.993370 GTAGCTGCACTCTTTGGTACG 59.007 52.381 1.02 0.00 0.00 3.67
1688 1762 6.449635 AAAACAGTTGTAGCATCAGTTTGA 57.550 33.333 0.00 0.00 28.51 2.69
1734 2089 2.437281 AGCTCCATGGACTGTAAGATGG 59.563 50.000 11.44 0.00 37.23 3.51
1819 2174 3.505680 TCAACCATTCCGATTCCACAAAG 59.494 43.478 0.00 0.00 0.00 2.77
1831 2186 5.360714 TCTTCAATGCCTATTCAACCATTCC 59.639 40.000 0.00 0.00 0.00 3.01
1838 2193 5.160641 GCGTTTTCTTCAATGCCTATTCAA 58.839 37.500 0.00 0.00 33.22 2.69
1888 2298 3.618690 AGTCAGTAACTTCCATGAGCC 57.381 47.619 0.00 0.00 33.03 4.70
1925 2335 3.498777 GGAGCAAACTGACACTAGAAACC 59.501 47.826 0.00 0.00 0.00 3.27
1973 2384 6.267817 ACAATTATGATCATTTTCGTGCCTG 58.732 36.000 14.65 2.12 0.00 4.85
2009 2420 9.109393 GGATATTAGTTTCACATGCTTCAGTTA 57.891 33.333 0.00 0.00 0.00 2.24
2020 2431 5.350365 GCTGTTGTCGGATATTAGTTTCACA 59.650 40.000 0.00 0.00 0.00 3.58
2024 2435 5.488341 ACTGCTGTTGTCGGATATTAGTTT 58.512 37.500 0.00 0.00 0.00 2.66
2025 2436 5.086104 ACTGCTGTTGTCGGATATTAGTT 57.914 39.130 0.00 0.00 0.00 2.24
2165 2576 1.667724 GTAGCACTACTGCAGCAATGG 59.332 52.381 15.27 0.00 46.97 3.16
2216 2683 7.464444 GCACTTACAGTAACTTTGTAAACACGA 60.464 37.037 0.00 0.00 39.68 4.35
2239 2706 2.352805 CTCCCCCAGTTCCTGCAC 59.647 66.667 0.00 0.00 0.00 4.57
2360 2827 9.452287 CCCAATTCTTCAAAATTATTCCAACAT 57.548 29.630 0.00 0.00 0.00 2.71
2375 2842 4.088634 CCCAAGAACATCCCAATTCTTCA 58.911 43.478 0.00 0.00 42.03 3.02
2455 2922 6.842163 AGACGAAATCACCAATTACATTGTC 58.158 36.000 0.00 0.00 38.59 3.18
2585 3052 4.993705 ATCCTCAAAAACCTCACTACCA 57.006 40.909 0.00 0.00 0.00 3.25
2595 3062 7.382218 CAGTTGACCAATGTAATCCTCAAAAAC 59.618 37.037 0.00 0.00 0.00 2.43
2795 3263 6.384015 TCAGCAACCTAATCTTCTATGGAGAA 59.616 38.462 0.00 0.00 39.47 2.87
2797 3265 5.988561 GTCAGCAACCTAATCTTCTATGGAG 59.011 44.000 0.00 0.00 0.00 3.86
2798 3266 5.425217 TGTCAGCAACCTAATCTTCTATGGA 59.575 40.000 0.00 0.00 0.00 3.41
2800 3268 7.615582 TTTGTCAGCAACCTAATCTTCTATG 57.384 36.000 0.00 0.00 33.82 2.23
2802 3270 9.905713 ATATTTTGTCAGCAACCTAATCTTCTA 57.094 29.630 0.00 0.00 33.82 2.10
2803 3271 8.814038 ATATTTTGTCAGCAACCTAATCTTCT 57.186 30.769 0.00 0.00 33.82 2.85
2827 3295 9.130661 TGGCTTGCTTGTACAATATACATTAAT 57.869 29.630 9.13 0.00 0.00 1.40
2828 3296 8.512966 TGGCTTGCTTGTACAATATACATTAA 57.487 30.769 9.13 0.00 0.00 1.40
2829 3297 8.690203 ATGGCTTGCTTGTACAATATACATTA 57.310 30.769 9.13 0.00 0.00 1.90
2830 3298 7.587037 ATGGCTTGCTTGTACAATATACATT 57.413 32.000 9.13 0.00 0.00 2.71
2831 3299 7.939039 ACTATGGCTTGCTTGTACAATATACAT 59.061 33.333 9.13 11.17 0.00 2.29
2832 3300 7.279615 ACTATGGCTTGCTTGTACAATATACA 58.720 34.615 9.13 4.74 0.00 2.29
2833 3301 7.730364 ACTATGGCTTGCTTGTACAATATAC 57.270 36.000 9.13 0.19 0.00 1.47
2834 3302 8.647796 ACTACTATGGCTTGCTTGTACAATATA 58.352 33.333 9.13 0.00 0.00 0.86
2835 3303 7.509546 ACTACTATGGCTTGCTTGTACAATAT 58.490 34.615 9.13 0.00 0.00 1.28
2836 3304 6.884832 ACTACTATGGCTTGCTTGTACAATA 58.115 36.000 9.13 0.00 0.00 1.90
2837 3305 5.745227 ACTACTATGGCTTGCTTGTACAAT 58.255 37.500 9.13 0.00 0.00 2.71
2838 3306 5.160607 ACTACTATGGCTTGCTTGTACAA 57.839 39.130 8.28 8.28 0.00 2.41
2839 3307 4.819105 ACTACTATGGCTTGCTTGTACA 57.181 40.909 0.00 0.00 0.00 2.90
2840 3308 5.657474 TGTACTACTATGGCTTGCTTGTAC 58.343 41.667 0.00 0.00 0.00 2.90
2841 3309 5.925506 TGTACTACTATGGCTTGCTTGTA 57.074 39.130 0.00 0.00 0.00 2.41
2842 3310 4.819105 TGTACTACTATGGCTTGCTTGT 57.181 40.909 0.00 0.00 0.00 3.16
2843 3311 4.024556 GCATGTACTACTATGGCTTGCTTG 60.025 45.833 0.00 0.00 0.00 4.01
2844 3312 4.130118 GCATGTACTACTATGGCTTGCTT 58.870 43.478 0.00 0.00 0.00 3.91
2845 3313 3.389329 AGCATGTACTACTATGGCTTGCT 59.611 43.478 0.00 0.00 36.29 3.91
2846 3314 3.733337 AGCATGTACTACTATGGCTTGC 58.267 45.455 0.00 0.00 0.00 4.01
2847 3315 7.786178 TTTTAGCATGTACTACTATGGCTTG 57.214 36.000 0.00 0.00 0.00 4.01
2848 3316 8.840321 CAATTTTAGCATGTACTACTATGGCTT 58.160 33.333 0.00 0.00 0.00 4.35
2849 3317 7.993183 ACAATTTTAGCATGTACTACTATGGCT 59.007 33.333 0.00 0.00 0.00 4.75
2850 3318 8.154649 ACAATTTTAGCATGTACTACTATGGC 57.845 34.615 0.00 0.00 0.00 4.40
2904 3397 3.297134 TCTGTTTGAAGGCTTTCCAGT 57.703 42.857 6.06 0.00 32.09 4.00
3058 3570 4.366684 GAGGTGGGCCAGGGGTTG 62.367 72.222 6.40 0.00 37.19 3.77
3104 3620 5.997129 TGAAAGAAGAGTGTATCATGCAACA 59.003 36.000 0.00 0.00 0.00 3.33
3137 3653 7.789273 AAAGACTGATATTCTGCATGAGAAG 57.211 36.000 0.00 0.00 44.14 2.85
3354 3870 8.637196 AGATACGACAATATGAAGAGTATGGA 57.363 34.615 0.00 0.00 0.00 3.41
3393 3909 4.610605 TTTGTACAGCCTGCAGTAGTTA 57.389 40.909 13.81 0.00 0.00 2.24
3488 4004 1.745653 GCCTCAGCAACCTGGATAAAC 59.254 52.381 0.00 0.00 39.61 2.01
3545 4061 7.398024 ACAGAATAGTTAGCAAGTGAGGAAAT 58.602 34.615 0.00 0.00 0.00 2.17
3607 4123 5.221641 GGGTTGGAATAAAAGCAGAAAAGGT 60.222 40.000 0.00 0.00 0.00 3.50
3698 4214 8.864069 TCAGAAAATAACATTGAAAAGCGAAA 57.136 26.923 0.00 0.00 0.00 3.46
3811 4366 3.560357 ACCCCCAAAAGGATAGCTTTT 57.440 42.857 0.00 0.00 38.24 2.27
3959 4514 2.475111 CCGTATATTGCTAGCACCAACG 59.525 50.000 19.17 22.16 0.00 4.10
4206 4761 3.264193 AGGATAGTGCCAACATGAAGACA 59.736 43.478 0.00 0.00 0.00 3.41
4379 4934 8.729756 CACAAGTGAATGACTGGATATACAAAA 58.270 33.333 0.00 0.00 34.02 2.44
4452 5007 3.788434 AACACGCTGTGTCGAAATAAG 57.212 42.857 13.33 0.00 46.79 1.73
4483 5038 2.574006 TGTTGCTGCTTCTCCTTCAT 57.426 45.000 0.00 0.00 0.00 2.57
4564 5119 2.124403 GCTGCACCCTGGGAGATG 60.124 66.667 22.23 8.76 0.00 2.90
4583 5138 1.851304 ATGGTGGGTTTGCATCGAAT 58.149 45.000 0.00 0.00 0.00 3.34
4669 5226 8.731605 TGATAATTCAAAAACAGCCACGTATAA 58.268 29.630 0.00 0.00 0.00 0.98
4675 5232 9.807649 ATCTAATGATAATTCAAAAACAGCCAC 57.192 29.630 0.00 0.00 34.96 5.01
4718 5277 6.094881 ACGACAGAGTTCATTTTTGGAAGAAA 59.905 34.615 0.00 0.00 0.00 2.52
4719 5278 5.588648 ACGACAGAGTTCATTTTTGGAAGAA 59.411 36.000 0.00 0.00 0.00 2.52
4720 5279 5.007626 CACGACAGAGTTCATTTTTGGAAGA 59.992 40.000 0.00 0.00 0.00 2.87
4721 5280 5.007626 TCACGACAGAGTTCATTTTTGGAAG 59.992 40.000 0.00 0.00 0.00 3.46
4733 5292 6.929049 TGAACTCAATAAATCACGACAGAGTT 59.071 34.615 0.00 0.00 44.85 3.01
4737 5296 6.017933 GCTTGAACTCAATAAATCACGACAG 58.982 40.000 0.00 0.00 35.02 3.51
4742 5301 7.848051 CGATACAGCTTGAACTCAATAAATCAC 59.152 37.037 0.00 0.00 35.02 3.06
4792 5351 7.822658 AGTAATAAACCGTGTTTGCATGTAAT 58.177 30.769 10.95 0.00 0.00 1.89
4821 5380 2.432146 TGTCATCTGATCTAGTGGTGCC 59.568 50.000 0.00 0.00 0.00 5.01
4822 5381 3.382865 TCTGTCATCTGATCTAGTGGTGC 59.617 47.826 0.00 0.00 0.00 5.01
4825 5384 6.183360 TGTCAATCTGTCATCTGATCTAGTGG 60.183 42.308 0.00 0.00 32.45 4.00
4853 5412 5.535333 AGATCTTTTGCAAAGTTCACCATG 58.465 37.500 12.41 0.00 0.00 3.66
4861 5420 7.414984 GCAGATAGCTAAGATCTTTTGCAAAGT 60.415 37.037 24.99 13.21 41.15 2.66
4988 5548 7.147312 TGCGAATCAACATCAATTTTCTTTCT 58.853 30.769 0.00 0.00 0.00 2.52
4989 5549 7.337150 TGCGAATCAACATCAATTTTCTTTC 57.663 32.000 0.00 0.00 0.00 2.62
4993 5553 8.564648 TGATATGCGAATCAACATCAATTTTC 57.435 30.769 0.00 0.00 32.97 2.29
5376 5938 0.905357 ATACCCAGCTGCTTCTTCGT 59.095 50.000 8.66 0.00 0.00 3.85
5565 6127 0.394352 GCACCCATAGACACAAGGGG 60.394 60.000 0.00 0.00 45.83 4.79
5620 6182 7.924947 TCAGATAACAAGAGATAAGCATGACTG 59.075 37.037 0.00 0.00 0.00 3.51
5623 6185 8.481314 ACTTCAGATAACAAGAGATAAGCATGA 58.519 33.333 0.00 0.00 0.00 3.07
5624 6186 8.549548 CACTTCAGATAACAAGAGATAAGCATG 58.450 37.037 0.00 0.00 0.00 4.06
5625 6187 8.263640 ACACTTCAGATAACAAGAGATAAGCAT 58.736 33.333 0.00 0.00 0.00 3.79
5628 6190 9.645059 TGAACACTTCAGATAACAAGAGATAAG 57.355 33.333 0.00 0.00 34.08 1.73
5636 6199 5.920840 CGAGAGTGAACACTTCAGATAACAA 59.079 40.000 8.87 0.00 42.66 2.83
5639 6202 4.486090 GCGAGAGTGAACACTTCAGATAA 58.514 43.478 8.87 0.00 42.66 1.75
5642 6205 1.335051 CGCGAGAGTGAACACTTCAGA 60.335 52.381 0.00 0.00 46.66 3.27
5654 6218 1.032794 TAATCTGGCATCGCGAGAGT 58.967 50.000 16.66 7.76 45.57 3.24
5750 6348 9.654663 GTGATCCTCTACAGTTTTACAGTATTT 57.345 33.333 0.00 0.00 0.00 1.40
5751 6349 9.036980 AGTGATCCTCTACAGTTTTACAGTATT 57.963 33.333 0.00 0.00 0.00 1.89
5752 6350 8.596781 AGTGATCCTCTACAGTTTTACAGTAT 57.403 34.615 0.00 0.00 0.00 2.12
5754 6352 6.919775 AGTGATCCTCTACAGTTTTACAGT 57.080 37.500 0.00 0.00 0.00 3.55
5755 6353 7.155328 ACAAGTGATCCTCTACAGTTTTACAG 58.845 38.462 0.00 0.00 0.00 2.74
5758 6356 6.934645 CCAACAAGTGATCCTCTACAGTTTTA 59.065 38.462 0.00 0.00 0.00 1.52
5760 6358 5.163195 ACCAACAAGTGATCCTCTACAGTTT 60.163 40.000 0.00 0.00 0.00 2.66
5761 6359 4.348168 ACCAACAAGTGATCCTCTACAGTT 59.652 41.667 0.00 0.00 0.00 3.16
5771 6369 4.504097 GTGAAAAGCAACCAACAAGTGATC 59.496 41.667 0.00 0.00 0.00 2.92
5775 6373 2.831526 AGGTGAAAAGCAACCAACAAGT 59.168 40.909 0.00 0.00 33.51 3.16
5776 6374 3.525268 AGGTGAAAAGCAACCAACAAG 57.475 42.857 0.00 0.00 33.51 3.16
5777 6375 3.971245 AAGGTGAAAAGCAACCAACAA 57.029 38.095 0.00 0.00 33.51 2.83
5806 6404 9.130661 ACAGTGCTTTATACCATAATAATGCAA 57.869 29.630 14.79 2.67 45.90 4.08
5807 6405 8.567104 CACAGTGCTTTATACCATAATAATGCA 58.433 33.333 11.08 11.08 44.04 3.96
5808 6406 8.023128 CCACAGTGCTTTATACCATAATAATGC 58.977 37.037 0.00 7.25 40.36 3.56
5810 6408 8.224720 ACCCACAGTGCTTTATACCATAATAAT 58.775 33.333 0.00 0.00 0.00 1.28
5811 6409 7.579105 ACCCACAGTGCTTTATACCATAATAA 58.421 34.615 0.00 0.00 0.00 1.40
5813 6411 6.013554 ACCCACAGTGCTTTATACCATAAT 57.986 37.500 0.00 0.00 0.00 1.28
5814 6412 5.444744 ACCCACAGTGCTTTATACCATAA 57.555 39.130 0.00 0.00 0.00 1.90
5815 6413 5.045505 TGAACCCACAGTGCTTTATACCATA 60.046 40.000 0.00 0.00 0.00 2.74
5816 6414 4.263727 TGAACCCACAGTGCTTTATACCAT 60.264 41.667 0.00 0.00 0.00 3.55
5818 6416 3.681593 TGAACCCACAGTGCTTTATACC 58.318 45.455 0.00 0.00 0.00 2.73
5819 6417 5.897377 AATGAACCCACAGTGCTTTATAC 57.103 39.130 0.00 0.00 0.00 1.47
5820 6418 5.588648 GCTAATGAACCCACAGTGCTTTATA 59.411 40.000 0.00 0.00 0.00 0.98
5821 6419 4.399303 GCTAATGAACCCACAGTGCTTTAT 59.601 41.667 0.00 0.00 0.00 1.40
5823 6421 2.558359 GCTAATGAACCCACAGTGCTTT 59.442 45.455 0.00 0.00 0.00 3.51
5824 6422 2.162681 GCTAATGAACCCACAGTGCTT 58.837 47.619 0.00 0.00 0.00 3.91
5826 6424 1.826385 AGCTAATGAACCCACAGTGC 58.174 50.000 0.00 0.00 0.00 4.40
5827 6425 2.095059 GCAAGCTAATGAACCCACAGTG 60.095 50.000 0.00 0.00 0.00 3.66
5828 6426 2.162681 GCAAGCTAATGAACCCACAGT 58.837 47.619 0.00 0.00 0.00 3.55
5829 6427 2.161855 TGCAAGCTAATGAACCCACAG 58.838 47.619 0.00 0.00 0.00 3.66
5830 6428 2.284754 TGCAAGCTAATGAACCCACA 57.715 45.000 0.00 0.00 0.00 4.17
5831 6429 2.819608 TCTTGCAAGCTAATGAACCCAC 59.180 45.455 21.99 0.00 0.00 4.61
5832 6430 3.153369 TCTTGCAAGCTAATGAACCCA 57.847 42.857 21.99 0.00 0.00 4.51
5833 6431 4.158394 TCATTCTTGCAAGCTAATGAACCC 59.842 41.667 28.16 0.00 35.88 4.11
5834 6432 5.314923 TCATTCTTGCAAGCTAATGAACC 57.685 39.130 28.16 0.00 35.88 3.62
5836 6434 5.012239 ACCTCATTCTTGCAAGCTAATGAA 58.988 37.500 29.07 17.53 37.76 2.57
5837 6435 4.592942 ACCTCATTCTTGCAAGCTAATGA 58.407 39.130 28.24 28.24 36.32 2.57
5838 6436 4.978083 ACCTCATTCTTGCAAGCTAATG 57.022 40.909 24.65 24.65 0.00 1.90
5839 6437 5.990120 AAACCTCATTCTTGCAAGCTAAT 57.010 34.783 21.99 13.94 0.00 1.73
5840 6438 7.466746 AATAAACCTCATTCTTGCAAGCTAA 57.533 32.000 21.99 12.15 0.00 3.09
5841 6439 7.466746 AAATAAACCTCATTCTTGCAAGCTA 57.533 32.000 21.99 12.21 0.00 3.32
5842 6440 5.990120 AATAAACCTCATTCTTGCAAGCT 57.010 34.783 21.99 8.52 0.00 3.74
5843 6441 6.870439 AGAAAATAAACCTCATTCTTGCAAGC 59.130 34.615 21.99 1.27 0.00 4.01
5847 6445 6.529477 GCTCAGAAAATAAACCTCATTCTTGC 59.471 38.462 0.00 0.00 0.00 4.01
5848 6446 7.031975 GGCTCAGAAAATAAACCTCATTCTTG 58.968 38.462 0.00 0.00 0.00 3.02
5849 6447 6.127897 CGGCTCAGAAAATAAACCTCATTCTT 60.128 38.462 0.00 0.00 0.00 2.52
5850 6448 5.355350 CGGCTCAGAAAATAAACCTCATTCT 59.645 40.000 0.00 0.00 0.00 2.40
5852 6450 4.399303 CCGGCTCAGAAAATAAACCTCATT 59.601 41.667 0.00 0.00 0.00 2.57
5853 6451 3.947834 CCGGCTCAGAAAATAAACCTCAT 59.052 43.478 0.00 0.00 0.00 2.90
5854 6452 3.343617 CCGGCTCAGAAAATAAACCTCA 58.656 45.455 0.00 0.00 0.00 3.86
5855 6453 2.683362 CCCGGCTCAGAAAATAAACCTC 59.317 50.000 0.00 0.00 0.00 3.85
5856 6454 2.723273 CCCGGCTCAGAAAATAAACCT 58.277 47.619 0.00 0.00 0.00 3.50
5857 6455 1.134367 GCCCGGCTCAGAAAATAAACC 59.866 52.381 0.71 0.00 0.00 3.27
5859 6457 2.507407 AGCCCGGCTCAGAAAATAAA 57.493 45.000 5.94 0.00 30.62 1.40
5860 6458 3.135712 TCATAGCCCGGCTCAGAAAATAA 59.864 43.478 17.40 0.00 40.44 1.40
5861 6459 2.703536 TCATAGCCCGGCTCAGAAAATA 59.296 45.455 17.40 0.00 40.44 1.40
5862 6460 1.490490 TCATAGCCCGGCTCAGAAAAT 59.510 47.619 17.40 0.00 40.44 1.82
5865 6463 0.178068 GTTCATAGCCCGGCTCAGAA 59.822 55.000 17.40 17.75 40.44 3.02
5867 6465 0.531532 CTGTTCATAGCCCGGCTCAG 60.532 60.000 17.40 12.85 40.44 3.35
5868 6466 1.264749 ACTGTTCATAGCCCGGCTCA 61.265 55.000 17.40 6.38 40.44 4.26
5870 6468 0.753262 CTACTGTTCATAGCCCGGCT 59.247 55.000 18.05 18.05 43.41 5.52
5871 6469 0.249911 CCTACTGTTCATAGCCCGGC 60.250 60.000 0.00 0.00 0.00 6.13
5874 6472 1.132500 AGCCCTACTGTTCATAGCCC 58.868 55.000 0.00 0.00 0.00 5.19
5876 6474 3.198872 GTCAAGCCCTACTGTTCATAGC 58.801 50.000 0.00 0.00 0.00 2.97
5877 6475 4.184629 GTGTCAAGCCCTACTGTTCATAG 58.815 47.826 0.00 0.00 0.00 2.23
5878 6476 3.580895 TGTGTCAAGCCCTACTGTTCATA 59.419 43.478 0.00 0.00 0.00 2.15
5880 6478 1.765904 TGTGTCAAGCCCTACTGTTCA 59.234 47.619 0.00 0.00 0.00 3.18
5881 6479 2.543777 TGTGTCAAGCCCTACTGTTC 57.456 50.000 0.00 0.00 0.00 3.18
5882 6480 3.508845 AATGTGTCAAGCCCTACTGTT 57.491 42.857 0.00 0.00 0.00 3.16
5883 6481 3.508845 AAATGTGTCAAGCCCTACTGT 57.491 42.857 0.00 0.00 0.00 3.55
5884 6482 3.612479 GCAAAATGTGTCAAGCCCTACTG 60.612 47.826 0.00 0.00 0.00 2.74
5885 6483 2.558359 GCAAAATGTGTCAAGCCCTACT 59.442 45.455 0.00 0.00 0.00 2.57
5886 6484 2.352715 GGCAAAATGTGTCAAGCCCTAC 60.353 50.000 0.00 0.00 36.17 3.18
5887 6485 1.892474 GGCAAAATGTGTCAAGCCCTA 59.108 47.619 0.00 0.00 36.17 3.53
5888 6486 0.681175 GGCAAAATGTGTCAAGCCCT 59.319 50.000 0.00 0.00 36.17 5.19
5889 6487 3.215642 GGCAAAATGTGTCAAGCCC 57.784 52.632 0.00 0.00 36.17 5.19
5890 6488 0.667184 CGGGCAAAATGTGTCAAGCC 60.667 55.000 0.00 0.00 41.29 4.35
5891 6489 0.667184 CCGGGCAAAATGTGTCAAGC 60.667 55.000 0.00 0.00 31.37 4.01
5892 6490 0.667184 GCCGGGCAAAATGTGTCAAG 60.667 55.000 15.62 0.00 31.37 3.02
5893 6491 1.112315 AGCCGGGCAAAATGTGTCAA 61.112 50.000 23.09 0.00 31.37 3.18
5894 6492 1.112315 AAGCCGGGCAAAATGTGTCA 61.112 50.000 23.09 0.00 31.37 3.58
5895 6493 0.667184 CAAGCCGGGCAAAATGTGTC 60.667 55.000 23.09 0.00 0.00 3.67
5896 6494 1.367102 CAAGCCGGGCAAAATGTGT 59.633 52.632 23.09 0.00 0.00 3.72
5897 6495 0.249826 AACAAGCCGGGCAAAATGTG 60.250 50.000 23.09 10.97 0.00 3.21
5898 6496 0.249826 CAACAAGCCGGGCAAAATGT 60.250 50.000 23.09 16.62 0.00 2.71
5914 6512 1.221414 GCTGATATCCAGTCGCCAAC 58.779 55.000 0.00 0.00 44.71 3.77
5918 6516 2.735663 CAATCTGCTGATATCCAGTCGC 59.264 50.000 6.51 0.00 44.71 5.19
5928 6526 3.945921 CACATTCCTGACAATCTGCTGAT 59.054 43.478 0.00 0.00 33.70 2.90
5929 6527 3.244665 ACACATTCCTGACAATCTGCTGA 60.245 43.478 0.00 0.00 0.00 4.26
5930 6528 3.079578 ACACATTCCTGACAATCTGCTG 58.920 45.455 0.00 0.00 0.00 4.41
5931 6529 3.244665 TGACACATTCCTGACAATCTGCT 60.245 43.478 0.00 0.00 0.00 4.24
5932 6530 3.076621 TGACACATTCCTGACAATCTGC 58.923 45.455 0.00 0.00 0.00 4.26
5933 6531 4.516321 TGTTGACACATTCCTGACAATCTG 59.484 41.667 0.00 0.00 0.00 2.90
5934 6532 4.717877 TGTTGACACATTCCTGACAATCT 58.282 39.130 0.00 0.00 0.00 2.40
5962 6572 1.963515 CCTAAGGCCAGTTTGCACTTT 59.036 47.619 5.01 0.00 0.00 2.66
5983 6593 2.182842 CCCGGAGCAGCAGCAATAC 61.183 63.158 0.73 0.00 45.49 1.89
5984 6594 2.190313 CCCGGAGCAGCAGCAATA 59.810 61.111 0.73 0.00 45.49 1.90
6014 6657 1.611410 CCACAACCATACAGCAGCAGA 60.611 52.381 0.00 0.00 0.00 4.26
6018 6661 1.167851 CCACCACAACCATACAGCAG 58.832 55.000 0.00 0.00 0.00 4.24
6023 6666 2.699954 CTGACTCCACCACAACCATAC 58.300 52.381 0.00 0.00 0.00 2.39
6129 6773 3.582444 CGATTCGCTCTTCAGAATTGG 57.418 47.619 0.00 0.00 37.23 3.16
6144 6788 1.442526 CCCATCAGCTGGTGCGATTC 61.443 60.000 22.09 0.00 44.30 2.52
6145 6789 1.452651 CCCATCAGCTGGTGCGATT 60.453 57.895 22.09 0.00 44.30 3.34
6149 6793 2.439156 GACCCCATCAGCTGGTGC 60.439 66.667 22.09 3.87 44.30 5.01
6151 6795 2.607750 ACGACCCCATCAGCTGGT 60.608 61.111 15.13 2.68 44.30 4.00
6162 6811 1.899437 TTGGCATCTGGAGACGACCC 61.899 60.000 0.00 0.00 0.00 4.46
6242 6907 3.382832 CTTCAGGGACTCCGCCGT 61.383 66.667 0.00 0.00 34.60 5.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.