Multiple sequence alignment - TraesCS5D01G277500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G277500 chr5D 100.000 6024 0 0 1 6024 379571500 379577523 0.000000e+00 11125.0
1 TraesCS5D01G277500 chr5D 85.251 339 44 5 1 337 379561113 379561447 1.610000e-90 344.0
2 TraesCS5D01G277500 chr5D 85.802 324 40 5 1 322 379562897 379563216 7.480000e-89 339.0
3 TraesCS5D01G277500 chr5D 86.170 94 13 0 248 341 204323384 204323291 1.070000e-17 102.0
4 TraesCS5D01G277500 chr5D 85.556 90 13 0 246 335 82322189 82322100 1.790000e-15 95.3
5 TraesCS5D01G277500 chr5A 89.852 3843 246 62 354 4112 480172036 480175818 0.000000e+00 4804.0
6 TraesCS5D01G277500 chr5A 88.566 1583 75 40 4225 5764 480175822 480177341 0.000000e+00 1823.0
7 TraesCS5D01G277500 chr5A 84.257 343 45 6 1 338 480124076 480124414 5.820000e-85 326.0
8 TraesCS5D01G277500 chr5A 81.117 376 37 12 428 785 480141243 480141602 2.770000e-68 270.0
9 TraesCS5D01G277500 chr5A 84.393 173 22 5 159 329 480143780 480143949 1.340000e-36 165.0
10 TraesCS5D01G277500 chr5B 89.579 2092 104 33 365 2393 455505343 455507383 0.000000e+00 2551.0
11 TraesCS5D01G277500 chr5B 93.268 1218 38 19 2939 4120 455508152 455509361 0.000000e+00 1755.0
12 TraesCS5D01G277500 chr5B 86.513 1609 77 59 4219 5759 455509364 455510900 0.000000e+00 1640.0
13 TraesCS5D01G277500 chr5B 89.286 476 36 7 2470 2941 455507380 455507844 3.130000e-162 582.0
14 TraesCS5D01G277500 chr5B 83.529 340 48 6 1 338 455496640 455496973 1.630000e-80 311.0
15 TraesCS5D01G277500 chr5B 86.296 270 20 5 5763 6024 399183889 399183629 1.650000e-70 278.0
16 TraesCS5D01G277500 chr5B 83.955 268 28 3 5765 6024 680332008 680332268 6.030000e-60 243.0
17 TraesCS5D01G277500 chr7D 83.943 847 115 13 1074 1920 217997269 217998094 0.000000e+00 791.0
18 TraesCS5D01G277500 chr7D 88.664 247 16 3 5760 5998 414275792 414276034 2.120000e-74 291.0
19 TraesCS5D01G277500 chr7D 86.441 177 24 0 2113 2289 217998388 217998564 1.710000e-45 195.0
20 TraesCS5D01G277500 chr7A 83.570 846 116 15 1076 1920 230862763 230863586 0.000000e+00 771.0
21 TraesCS5D01G277500 chr7A 86.441 177 24 0 2113 2289 230863870 230864046 1.710000e-45 195.0
22 TraesCS5D01G277500 chr7B 83.549 851 111 14 1074 1920 181686175 181685350 0.000000e+00 769.0
23 TraesCS5D01G277500 chr7B 85.876 177 25 0 2113 2289 181685069 181684893 7.970000e-44 189.0
24 TraesCS5D01G277500 chr7B 88.535 157 14 2 5761 5916 514054584 514054737 2.870000e-43 187.0
25 TraesCS5D01G277500 chr7B 94.444 108 6 0 4112 4219 479326993 479326886 3.730000e-37 167.0
26 TraesCS5D01G277500 chr2B 88.525 244 15 3 5763 5998 543519761 543519999 3.550000e-72 283.0
27 TraesCS5D01G277500 chr2B 91.597 119 8 2 4106 4223 668189669 668189786 4.830000e-36 163.0
28 TraesCS5D01G277500 chr6D 85.766 274 23 5 5759 6024 24895097 24894832 5.950000e-70 276.0
29 TraesCS5D01G277500 chr2A 87.705 244 18 3 5763 5998 38740634 38740395 2.140000e-69 274.0
30 TraesCS5D01G277500 chr2A 82.784 273 29 9 5760 6023 375711562 375711299 1.690000e-55 228.0
31 TraesCS5D01G277500 chr2A 88.889 81 7 2 2536 2614 74975853 74975773 1.380000e-16 99.0
32 TraesCS5D01G277500 chr1D 85.926 270 22 4 5763 6024 370218173 370217912 2.140000e-69 274.0
33 TraesCS5D01G277500 chr1D 90.909 77 6 1 2535 2611 194469866 194469941 1.070000e-17 102.0
34 TraesCS5D01G277500 chr4D 85.714 273 20 5 5760 6024 170351415 170351676 2.770000e-68 270.0
35 TraesCS5D01G277500 chr4D 85.502 269 24 7 5763 6024 477743110 477742850 3.580000e-67 267.0
36 TraesCS5D01G277500 chr4D 84.926 272 26 4 5761 6024 54384700 54384964 1.670000e-65 261.0
37 TraesCS5D01G277500 chr3B 83.704 270 28 8 5763 6024 237320441 237320180 2.170000e-59 241.0
38 TraesCS5D01G277500 chr3D 98.039 102 2 0 4122 4223 462197511 462197410 1.730000e-40 178.0
39 TraesCS5D01G277500 chr3D 96.226 106 2 2 4122 4226 527004747 527004851 8.030000e-39 172.0
40 TraesCS5D01G277500 chr3D 82.468 154 11 7 5878 6023 565246240 565246095 2.950000e-23 121.0
41 TraesCS5D01G277500 chr3D 95.122 41 2 0 2584 2624 86908468 86908508 1.400000e-06 65.8
42 TraesCS5D01G277500 chr1A 98.000 100 2 0 4123 4222 523364522 523364423 2.230000e-39 174.0
43 TraesCS5D01G277500 chr1A 90.123 81 7 1 2535 2615 242010515 242010594 2.970000e-18 104.0
44 TraesCS5D01G277500 chr2D 96.154 104 4 0 4123 4226 593274243 593274346 2.890000e-38 171.0
45 TraesCS5D01G277500 chr2D 93.805 113 4 3 4123 4233 83963603 83963492 3.730000e-37 167.0
46 TraesCS5D01G277500 chr6B 96.117 103 4 0 4117 4219 95757262 95757364 1.040000e-37 169.0
47 TraesCS5D01G277500 chr1B 93.043 115 5 3 4115 4227 301472067 301472180 1.340000e-36 165.0
48 TraesCS5D01G277500 chr1B 90.909 77 6 1 2535 2611 271892675 271892600 1.070000e-17 102.0
49 TraesCS5D01G277500 chr3A 87.059 85 8 3 2534 2615 432856381 432856297 6.430000e-15 93.5
50 TraesCS5D01G277500 chr4B 85.057 87 13 0 255 341 17993583 17993497 8.320000e-14 89.8
51 TraesCS5D01G277500 chrUn 80.180 111 20 2 233 341 84534890 84535000 1.390000e-11 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G277500 chr5D 379571500 379577523 6023 False 11125.0 11125 100.0000 1 6024 1 chr5D.!!$F1 6023
1 TraesCS5D01G277500 chr5D 379561113 379563216 2103 False 341.5 344 85.5265 1 337 2 chr5D.!!$F2 336
2 TraesCS5D01G277500 chr5A 480172036 480177341 5305 False 3313.5 4804 89.2090 354 5764 2 chr5A.!!$F3 5410
3 TraesCS5D01G277500 chr5A 480141243 480143949 2706 False 217.5 270 82.7550 159 785 2 chr5A.!!$F2 626
4 TraesCS5D01G277500 chr5B 455505343 455510900 5557 False 1632.0 2551 89.6615 365 5759 4 chr5B.!!$F3 5394
5 TraesCS5D01G277500 chr7D 217997269 217998564 1295 False 493.0 791 85.1920 1074 2289 2 chr7D.!!$F2 1215
6 TraesCS5D01G277500 chr7A 230862763 230864046 1283 False 483.0 771 85.0055 1076 2289 2 chr7A.!!$F1 1213
7 TraesCS5D01G277500 chr7B 181684893 181686175 1282 True 479.0 769 84.7125 1074 2289 2 chr7B.!!$R2 1215

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
393 394 0.449507 CTGAAGCGAGCGAACAAACG 60.450 55.000 0.00 0.00 0.00 3.60 F
1996 3486 0.163788 CACTCGCACGACAAATGTCC 59.836 55.000 7.91 0.00 41.86 4.02 F
2439 4075 0.457443 TACGTCTGATGCCAGCTCAG 59.543 55.000 0.00 10.84 41.23 3.35 F
2474 4110 0.625849 AAATGATCGTTCCCCCAGCT 59.374 50.000 0.00 0.00 0.00 4.24 F
3582 6050 1.067060 GTAAATTGGATTGAGGGGCGC 59.933 52.381 0.00 0.00 0.00 6.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2099 3716 2.101415 TCCGAATCTCGTTGATCTGCAT 59.899 45.455 0.00 0.0 38.40 3.96 R
3858 6326 3.219176 ACCTCAATGGATGGCATAGTG 57.781 47.619 0.00 0.0 39.71 2.74 R
4327 6797 2.159057 GCCCCATTTATGACAGCTTTGG 60.159 50.000 0.00 0.0 0.00 3.28 R
4332 6802 2.378038 TCAAGCCCCATTTATGACAGC 58.622 47.619 0.00 0.0 0.00 4.40 R
5346 7873 0.169230 AAAAACAAGACGCGCACACA 59.831 45.000 5.73 0.0 0.00 3.72 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 6.353323 TGGATAAACATCACACGTATCCATT 58.647 36.000 6.77 0.00 43.28 3.16
32 33 6.481976 TGGATAAACATCACACGTATCCATTC 59.518 38.462 6.77 0.00 43.28 2.67
52 53 7.451255 TCCATTCCCGAGCATTCATTTAATAAT 59.549 33.333 0.00 0.00 0.00 1.28
84 85 2.164827 ACGTCCCACTTGTTTTGGAAAC 59.835 45.455 0.00 0.00 36.02 2.78
85 86 2.793237 CGTCCCACTTGTTTTGGAAACG 60.793 50.000 0.00 0.00 37.02 3.60
95 96 4.184629 TGTTTTGGAAACGTGGAAAATGG 58.815 39.130 0.00 0.00 0.00 3.16
97 98 4.314740 TTTGGAAACGTGGAAAATGGAG 57.685 40.909 0.00 0.00 0.00 3.86
100 101 3.505680 TGGAAACGTGGAAAATGGAGATG 59.494 43.478 0.00 0.00 0.00 2.90
113 114 4.953940 ATGGAGATGAGAAGAGCCTTAC 57.046 45.455 0.00 0.00 0.00 2.34
121 122 1.486726 AGAAGAGCCTTACCCAATCCG 59.513 52.381 0.00 0.00 0.00 4.18
123 124 0.831307 AGAGCCTTACCCAATCCGTC 59.169 55.000 0.00 0.00 0.00 4.79
125 126 0.831307 AGCCTTACCCAATCCGTCTC 59.169 55.000 0.00 0.00 0.00 3.36
141 142 2.442272 TCCACCTCCTCGCTAGCC 60.442 66.667 9.66 0.00 0.00 3.93
149 150 1.904378 CCTCGCTAGCCCTACCTCC 60.904 68.421 9.66 0.00 0.00 4.30
167 168 3.002791 CTCCGCTTTTATTCACTCTGCA 58.997 45.455 0.00 0.00 0.00 4.41
173 174 7.661437 TCCGCTTTTATTCACTCTGCATATTAT 59.339 33.333 0.00 0.00 0.00 1.28
256 257 6.947376 AATACCATAACTAGTACCCCATCC 57.053 41.667 0.00 0.00 0.00 3.51
257 258 4.289837 ACCATAACTAGTACCCCATCCA 57.710 45.455 0.00 0.00 0.00 3.41
258 259 4.839589 ACCATAACTAGTACCCCATCCAT 58.160 43.478 0.00 0.00 0.00 3.41
259 260 5.232347 ACCATAACTAGTACCCCATCCATT 58.768 41.667 0.00 0.00 0.00 3.16
262 263 4.772886 AACTAGTACCCCATCCATTCAC 57.227 45.455 0.00 0.00 0.00 3.18
264 265 4.108570 ACTAGTACCCCATCCATTCACAA 58.891 43.478 0.00 0.00 0.00 3.33
268 269 6.279813 AGTACCCCATCCATTCACAAATAT 57.720 37.500 0.00 0.00 0.00 1.28
269 270 7.401060 AGTACCCCATCCATTCACAAATATA 57.599 36.000 0.00 0.00 0.00 0.86
271 272 7.944554 AGTACCCCATCCATTCACAAATATAAG 59.055 37.037 0.00 0.00 0.00 1.73
272 273 6.921412 ACCCCATCCATTCACAAATATAAGA 58.079 36.000 0.00 0.00 0.00 2.10
274 275 7.452501 ACCCCATCCATTCACAAATATAAGATG 59.547 37.037 0.00 0.00 0.00 2.90
317 318 7.386851 TGGCCTACATATAGACTGAAATTAGC 58.613 38.462 3.32 0.00 0.00 3.09
318 319 6.531948 GGCCTACATATAGACTGAAATTAGCG 59.468 42.308 0.00 0.00 0.00 4.26
319 320 7.313646 GCCTACATATAGACTGAAATTAGCGA 58.686 38.462 0.00 0.00 0.00 4.93
321 322 9.130312 CCTACATATAGACTGAAATTAGCGAAC 57.870 37.037 0.00 0.00 0.00 3.95
322 323 7.624706 ACATATAGACTGAAATTAGCGAACG 57.375 36.000 0.00 0.00 0.00 3.95
323 324 7.423199 ACATATAGACTGAAATTAGCGAACGA 58.577 34.615 0.00 0.00 0.00 3.85
325 326 8.916654 CATATAGACTGAAATTAGCGAACGAAT 58.083 33.333 0.00 0.00 0.00 3.34
327 328 6.570690 AGACTGAAATTAGCGAACGAATAC 57.429 37.500 0.00 0.00 0.00 1.89
328 329 6.097356 AGACTGAAATTAGCGAACGAATACA 58.903 36.000 0.00 0.00 0.00 2.29
329 330 6.588756 AGACTGAAATTAGCGAACGAATACAA 59.411 34.615 0.00 0.00 0.00 2.41
330 331 7.277981 AGACTGAAATTAGCGAACGAATACAAT 59.722 33.333 0.00 0.00 0.00 2.71
333 334 9.697250 CTGAAATTAGCGAACGAATACAATAAA 57.303 29.630 0.00 0.00 0.00 1.40
336 337 8.524466 AATTAGCGAACGAATACAATAAAACG 57.476 30.769 0.00 0.00 0.00 3.60
338 339 5.310489 AGCGAACGAATACAATAAAACGTG 58.690 37.500 0.00 0.00 34.36 4.49
340 341 5.221682 GCGAACGAATACAATAAAACGTGTC 59.778 40.000 0.00 0.00 34.36 3.67
341 342 5.439425 CGAACGAATACAATAAAACGTGTCG 59.561 40.000 0.00 0.00 34.36 4.35
342 343 6.450845 AACGAATACAATAAAACGTGTCGA 57.549 33.333 0.00 0.00 34.36 4.20
343 344 5.836009 ACGAATACAATAAAACGTGTCGAC 58.164 37.500 9.11 9.11 31.96 4.20
360 361 8.661973 CGTGTCGACGTTTTAGATATTTAATG 57.338 34.615 11.62 0.00 40.91 1.90
361 362 8.316046 CGTGTCGACGTTTTAGATATTTAATGT 58.684 33.333 11.62 0.00 40.91 2.71
362 363 9.405083 GTGTCGACGTTTTAGATATTTAATGTG 57.595 33.333 11.62 0.00 0.00 3.21
384 385 4.023107 TGGACTATACATACTGAAGCGAGC 60.023 45.833 0.00 0.00 0.00 5.03
393 394 0.449507 CTGAAGCGAGCGAACAAACG 60.450 55.000 0.00 0.00 0.00 3.60
739 959 1.339055 CGGGATCACTGGAAGCAGAAA 60.339 52.381 0.00 0.00 37.60 2.52
740 960 2.363683 GGGATCACTGGAAGCAGAAAG 58.636 52.381 0.00 0.00 37.60 2.62
741 961 2.363683 GGATCACTGGAAGCAGAAAGG 58.636 52.381 0.00 0.00 37.60 3.11
742 962 2.026822 GGATCACTGGAAGCAGAAAGGA 60.027 50.000 0.00 0.00 37.60 3.36
743 963 3.560025 GGATCACTGGAAGCAGAAAGGAA 60.560 47.826 0.00 0.00 37.60 3.36
747 967 1.537202 CTGGAAGCAGAAAGGAAACCG 59.463 52.381 0.00 0.00 0.00 4.44
862 1097 2.839098 CTGGCAGTGGGTCCAGTT 59.161 61.111 6.28 0.00 43.66 3.16
864 1099 0.468029 CTGGCAGTGGGTCCAGTTTT 60.468 55.000 6.28 0.00 43.66 2.43
960 1223 4.753662 CCCCCTCCCACGACTCGA 62.754 72.222 5.20 0.00 0.00 4.04
968 1231 4.477975 CACGACTCGACCGCTCCC 62.478 72.222 5.20 0.00 0.00 4.30
970 1233 4.477975 CGACTCGACCGCTCCCAC 62.478 72.222 0.00 0.00 0.00 4.61
1131 1413 0.539051 CCAACCTCATCTTCTCCGCT 59.461 55.000 0.00 0.00 0.00 5.52
1350 1632 4.598894 CTCATCGCCTCCGCCCAG 62.599 72.222 0.00 0.00 0.00 4.45
1924 3410 4.769688 TGTGGTCTTCAGCAGGTATAATG 58.230 43.478 0.00 0.00 0.00 1.90
1931 3421 7.272978 GTCTTCAGCAGGTATAATGGACTAAA 58.727 38.462 0.00 0.00 0.00 1.85
1935 3425 5.992217 CAGCAGGTATAATGGACTAAACTCC 59.008 44.000 0.00 0.00 0.00 3.85
1962 3452 2.234908 AGTGCCACTATTGTCTGTCCTC 59.765 50.000 0.00 0.00 0.00 3.71
1996 3486 0.163788 CACTCGCACGACAAATGTCC 59.836 55.000 7.91 0.00 41.86 4.02
2037 3527 4.968626 TGTGTTTGACGATATGTTGATGC 58.031 39.130 0.00 0.00 0.00 3.91
2099 3716 5.786264 TTTAACCCAAAATGCTCCGTTTA 57.214 34.783 0.00 0.00 0.00 2.01
2317 3934 7.996465 TCGCACGTTTATAAATAAGTTTGTG 57.004 32.000 0.31 4.05 0.00 3.33
2418 4054 6.096846 AGCTTCTAATAATTTTGGACGCCAAT 59.903 34.615 11.30 1.45 43.55 3.16
2431 4067 2.404215 ACGCCAATATACGTCTGATGC 58.596 47.619 0.00 0.00 38.28 3.91
2439 4075 0.457443 TACGTCTGATGCCAGCTCAG 59.543 55.000 0.00 10.84 41.23 3.35
2473 4109 1.025041 GAAATGATCGTTCCCCCAGC 58.975 55.000 0.00 0.00 0.00 4.85
2474 4110 0.625849 AAATGATCGTTCCCCCAGCT 59.374 50.000 0.00 0.00 0.00 4.24
2492 4128 1.706443 CTAGGGTGGAACGAACGAAC 58.294 55.000 0.14 0.00 38.12 3.95
2499 4135 2.219216 GTGGAACGAACGAACGATTTCA 59.781 45.455 11.97 5.90 37.03 2.69
2509 4145 4.198894 CGAACGATTTCATTCGCAAAAC 57.801 40.909 0.00 0.00 42.82 2.43
2584 4223 1.314730 CCGTGCTGTTGTAAAGGGTT 58.685 50.000 0.00 0.00 0.00 4.11
2665 4304 3.491447 GGAATTGCCATGCTACATCAACC 60.491 47.826 0.00 0.00 36.34 3.77
2677 4316 3.904136 ACATCAACCGAAAAAGCTGAG 57.096 42.857 0.00 0.00 0.00 3.35
2683 4322 4.338118 TCAACCGAAAAAGCTGAGAATTGT 59.662 37.500 0.00 0.00 0.00 2.71
2691 4330 2.277969 AGCTGAGAATTGTCATGCTCG 58.722 47.619 17.74 4.66 37.88 5.03
2704 4343 3.665871 GTCATGCTCGAAAAACTGAAAGC 59.334 43.478 0.00 0.00 37.60 3.51
2735 4374 2.859526 TGTGTTCGCTCATTTTTGCA 57.140 40.000 0.00 0.00 0.00 4.08
2741 4380 1.680735 TCGCTCATTTTTGCAACCAGT 59.319 42.857 0.00 0.00 0.00 4.00
2794 4433 3.668656 GCGAAACACTTTAGGATTTGTGC 59.331 43.478 0.00 0.00 34.14 4.57
2852 4491 2.875933 TGCTTAAAAACGTGACCTCAGG 59.124 45.455 0.00 0.00 37.71 3.86
2866 4505 7.093640 ACGTGACCTCAGGTTCTATAACATTTA 60.094 37.037 0.00 0.00 41.57 1.40
2966 4915 6.632909 TCCCATTCTGCAAATATTCAAACTG 58.367 36.000 0.00 0.00 0.00 3.16
2971 4921 7.750229 TTCTGCAAATATTCAAACTGAGAGT 57.250 32.000 0.00 0.00 0.00 3.24
2972 4922 7.750229 TCTGCAAATATTCAAACTGAGAGTT 57.250 32.000 0.00 0.00 40.80 3.01
3032 4986 5.955959 GGTGTTTTAATTGGATTCCCCTACT 59.044 40.000 0.00 0.00 35.38 2.57
3033 4987 6.439375 GGTGTTTTAATTGGATTCCCCTACTT 59.561 38.462 0.00 0.00 35.38 2.24
3034 4988 7.320399 GTGTTTTAATTGGATTCCCCTACTTG 58.680 38.462 0.00 0.00 35.38 3.16
3035 4989 7.013834 TGTTTTAATTGGATTCCCCTACTTGT 58.986 34.615 0.00 0.00 35.38 3.16
3036 4990 7.511028 TGTTTTAATTGGATTCCCCTACTTGTT 59.489 33.333 0.00 0.00 35.38 2.83
3037 4991 9.027202 GTTTTAATTGGATTCCCCTACTTGTTA 57.973 33.333 0.00 0.00 35.38 2.41
3038 4992 8.817092 TTTAATTGGATTCCCCTACTTGTTAG 57.183 34.615 0.00 0.00 35.38 2.34
3125 5079 2.762887 TCAGCTCTCGATCCAAACTGAT 59.237 45.455 0.00 0.00 0.00 2.90
3159 5113 8.402472 CCAGTTGTTTTCATTTGTAGTAGTTGA 58.598 33.333 0.00 0.00 0.00 3.18
3451 5889 3.809279 TGCTGATTAACACCAGATATGCG 59.191 43.478 0.00 0.00 32.37 4.73
3468 5935 2.217750 TGCGCCGTATTCATAGCAATT 58.782 42.857 4.18 0.00 0.00 2.32
3471 5938 4.454161 TGCGCCGTATTCATAGCAATTTAT 59.546 37.500 4.18 0.00 0.00 1.40
3582 6050 1.067060 GTAAATTGGATTGAGGGGCGC 59.933 52.381 0.00 0.00 0.00 6.53
3774 6242 2.655090 TCTTCATTGCCACTGGTCAA 57.345 45.000 7.21 7.21 0.00 3.18
3858 6326 2.096248 AGAGACCTTCACATCTCCGTC 58.904 52.381 0.00 0.00 42.04 4.79
3974 6442 8.506168 TTATGTTGATTGTCTGTTATTCCCTC 57.494 34.615 0.00 0.00 0.00 4.30
4010 6478 4.150980 ACGCATTGATGATTTTTGCACTTG 59.849 37.500 0.00 0.00 32.94 3.16
4026 6494 3.604582 CACTTGAGACCCTGATCCTTTC 58.395 50.000 0.00 0.00 0.00 2.62
4127 6597 8.657712 ACCTTGGTATCCAATAATTAGTACTCC 58.342 37.037 0.00 0.00 43.07 3.85
4128 6598 8.101419 CCTTGGTATCCAATAATTAGTACTCCC 58.899 40.741 0.00 0.00 43.07 4.30
4136 6606 6.221659 CAATAATTAGTACTCCCTCCGTTCC 58.778 44.000 0.00 0.00 0.00 3.62
4137 6607 2.905415 TTAGTACTCCCTCCGTTCCA 57.095 50.000 0.00 0.00 0.00 3.53
4143 6613 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
4145 6615 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
4148 6618 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
4149 6619 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
4150 6620 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
4151 6621 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
4152 6622 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
4154 6624 5.643777 CCGTTCCAAAATAGATGACTCAACT 59.356 40.000 0.00 0.00 0.00 3.16
4155 6625 6.149474 CCGTTCCAAAATAGATGACTCAACTT 59.851 38.462 0.00 0.00 0.00 2.66
4156 6626 7.308589 CCGTTCCAAAATAGATGACTCAACTTT 60.309 37.037 0.00 0.00 0.00 2.66
4157 6627 8.717821 CGTTCCAAAATAGATGACTCAACTTTA 58.282 33.333 0.00 0.00 0.00 1.85
4194 6664 9.716531 AGTACAAAGTTAGTATAAAGTTGGGTC 57.283 33.333 0.00 0.00 0.00 4.46
4197 6667 9.227777 ACAAAGTTAGTATAAAGTTGGGTCATC 57.772 33.333 0.00 0.00 0.00 2.92
4198 6668 9.449719 CAAAGTTAGTATAAAGTTGGGTCATCT 57.550 33.333 0.00 0.00 0.00 2.90
4209 6679 7.611213 AAGTTGGGTCATCTATTTTAGAACG 57.389 36.000 0.00 0.00 38.50 3.95
4210 6680 6.113411 AGTTGGGTCATCTATTTTAGAACGG 58.887 40.000 0.00 0.00 38.50 4.44
4211 6681 5.943349 TGGGTCATCTATTTTAGAACGGA 57.057 39.130 0.00 0.00 38.50 4.69
4212 6682 5.914033 TGGGTCATCTATTTTAGAACGGAG 58.086 41.667 0.00 0.00 38.50 4.63
4213 6683 5.163343 TGGGTCATCTATTTTAGAACGGAGG 60.163 44.000 0.00 0.00 38.50 4.30
4214 6684 5.298347 GGTCATCTATTTTAGAACGGAGGG 58.702 45.833 0.00 0.00 38.50 4.30
4215 6685 5.070047 GGTCATCTATTTTAGAACGGAGGGA 59.930 44.000 0.00 0.00 38.50 4.20
4216 6686 6.217294 GTCATCTATTTTAGAACGGAGGGAG 58.783 44.000 0.00 0.00 38.50 4.30
4217 6687 5.897824 TCATCTATTTTAGAACGGAGGGAGT 59.102 40.000 0.00 0.00 38.50 3.85
4220 6690 7.909485 TCTATTTTAGAACGGAGGGAGTATT 57.091 36.000 0.00 0.00 0.00 1.89
4232 6702 4.762251 GGAGGGAGTATTTTGTATCATGCC 59.238 45.833 0.00 0.00 0.00 4.40
4248 6718 5.482163 TCATGCCGTTGATCCTATAATGA 57.518 39.130 0.00 0.00 0.00 2.57
4327 6797 5.880887 CCTTTGTTAGGTTACCTGGAGATTC 59.119 44.000 15.13 0.00 39.39 2.52
4328 6798 5.431179 TTGTTAGGTTACCTGGAGATTCC 57.569 43.478 15.13 0.00 34.61 3.01
4340 6815 4.842531 TGGAGATTCCAAAGCTGTCATA 57.157 40.909 0.00 0.00 45.00 2.15
4341 6816 5.178096 TGGAGATTCCAAAGCTGTCATAA 57.822 39.130 0.00 0.00 45.00 1.90
4344 6819 6.095860 TGGAGATTCCAAAGCTGTCATAAATG 59.904 38.462 0.00 0.00 45.00 2.32
4381 6863 6.183360 TGTTGTCATGAAGCACGATATAGAGA 60.183 38.462 0.00 0.00 0.00 3.10
4384 6866 7.436933 TGTCATGAAGCACGATATAGAGATTT 58.563 34.615 0.00 0.00 0.00 2.17
4385 6867 7.928167 TGTCATGAAGCACGATATAGAGATTTT 59.072 33.333 0.00 0.00 0.00 1.82
4420 6912 2.124903 GCATGTTCAGCTATGCATTGC 58.875 47.619 23.20 23.20 46.72 3.56
4422 6914 3.737047 GCATGTTCAGCTATGCATTGCTT 60.737 43.478 29.28 14.53 46.72 3.91
4423 6915 3.497297 TGTTCAGCTATGCATTGCTTG 57.503 42.857 29.28 23.20 36.76 4.01
4546 7047 1.824230 TGGTTTGCTGTTCACTTGCTT 59.176 42.857 0.00 0.00 0.00 3.91
4555 7056 4.794003 GCTGTTCACTTGCTTGCTATTGTT 60.794 41.667 0.00 0.00 0.00 2.83
4556 7057 5.261209 TGTTCACTTGCTTGCTATTGTTT 57.739 34.783 0.00 0.00 0.00 2.83
4557 7058 5.659463 TGTTCACTTGCTTGCTATTGTTTT 58.341 33.333 0.00 0.00 0.00 2.43
4558 7059 5.748152 TGTTCACTTGCTTGCTATTGTTTTC 59.252 36.000 0.00 0.00 0.00 2.29
4559 7060 4.536065 TCACTTGCTTGCTATTGTTTTCG 58.464 39.130 0.00 0.00 0.00 3.46
4560 7061 4.036262 TCACTTGCTTGCTATTGTTTTCGT 59.964 37.500 0.00 0.00 0.00 3.85
4561 7062 5.237561 TCACTTGCTTGCTATTGTTTTCGTA 59.762 36.000 0.00 0.00 0.00 3.43
4562 7063 5.339611 CACTTGCTTGCTATTGTTTTCGTAC 59.660 40.000 0.00 0.00 0.00 3.67
4596 7097 2.202756 GCTCAGGTTAGACCGGCG 60.203 66.667 0.00 0.00 44.90 6.46
5075 7585 3.838120 GCCAGAGCAAATAGACAAAACC 58.162 45.455 0.00 0.00 39.53 3.27
5076 7586 3.367395 GCCAGAGCAAATAGACAAAACCC 60.367 47.826 0.00 0.00 39.53 4.11
5077 7587 3.826157 CCAGAGCAAATAGACAAAACCCA 59.174 43.478 0.00 0.00 0.00 4.51
5078 7588 4.280677 CCAGAGCAAATAGACAAAACCCAA 59.719 41.667 0.00 0.00 0.00 4.12
5079 7589 5.222631 CAGAGCAAATAGACAAAACCCAAC 58.777 41.667 0.00 0.00 0.00 3.77
5080 7590 5.010012 CAGAGCAAATAGACAAAACCCAACT 59.990 40.000 0.00 0.00 0.00 3.16
5081 7591 5.241728 AGAGCAAATAGACAAAACCCAACTC 59.758 40.000 0.00 0.00 0.00 3.01
5082 7592 4.892934 AGCAAATAGACAAAACCCAACTCA 59.107 37.500 0.00 0.00 0.00 3.41
5098 7608 1.468520 ACTCAAAATGTTCGCCGGATG 59.531 47.619 5.05 0.00 0.00 3.51
5106 7616 3.737032 TGTTCGCCGGATGTATAATCA 57.263 42.857 5.05 0.00 0.00 2.57
5108 7618 3.181474 TGTTCGCCGGATGTATAATCACA 60.181 43.478 5.05 0.00 0.00 3.58
5136 7646 1.472662 CCTTCGTGGGAGTGGACAGT 61.473 60.000 0.00 0.00 0.00 3.55
5329 7856 9.586435 CTATTTATTTTCTTTGATGTTGTCCCC 57.414 33.333 0.00 0.00 0.00 4.81
5331 7858 1.904287 TTCTTTGATGTTGTCCCCCG 58.096 50.000 0.00 0.00 0.00 5.73
5348 7875 4.962836 GCAGCAGCCACCCAGTGT 62.963 66.667 0.00 0.00 33.58 3.55
5365 7896 0.169230 TGTGTGCGCGTCTTGTTTTT 59.831 45.000 8.43 0.00 0.00 1.94
5421 7953 6.969993 TTTGTCCAAAGCTTACATTACCTT 57.030 33.333 0.00 0.00 0.00 3.50
5422 7954 8.466617 TTTTGTCCAAAGCTTACATTACCTTA 57.533 30.769 0.00 0.00 0.00 2.69
5423 7955 7.443259 TTGTCCAAAGCTTACATTACCTTAC 57.557 36.000 0.00 0.00 0.00 2.34
5425 7957 7.228590 TGTCCAAAGCTTACATTACCTTACTT 58.771 34.615 0.00 0.00 0.00 2.24
5427 7959 8.573885 GTCCAAAGCTTACATTACCTTACTTTT 58.426 33.333 0.00 0.00 0.00 2.27
5428 7960 8.789762 TCCAAAGCTTACATTACCTTACTTTTC 58.210 33.333 0.00 0.00 0.00 2.29
5429 7961 7.749126 CCAAAGCTTACATTACCTTACTTTTCG 59.251 37.037 0.00 0.00 0.00 3.46
5430 7962 7.974482 AAGCTTACATTACCTTACTTTTCGT 57.026 32.000 0.00 0.00 0.00 3.85
5431 7963 7.974482 AGCTTACATTACCTTACTTTTCGTT 57.026 32.000 0.00 0.00 0.00 3.85
5432 7964 9.492973 AAGCTTACATTACCTTACTTTTCGTTA 57.507 29.630 0.00 0.00 0.00 3.18
5433 7965 8.929746 AGCTTACATTACCTTACTTTTCGTTAC 58.070 33.333 0.00 0.00 0.00 2.50
5472 8020 9.420551 GCTTGTAGTAACATTGTAACTAGTTCT 57.579 33.333 12.39 2.21 34.97 3.01
5494 8042 5.236478 TCTGTTTCGTCTGTTTGATCTTTCC 59.764 40.000 0.00 0.00 0.00 3.13
5599 8147 4.389374 TGGTTCAACTGAATCTGTTCTCC 58.611 43.478 2.44 6.62 36.19 3.71
5623 8182 2.596862 GTGACCGTGTTTGTTTTTCTGC 59.403 45.455 0.00 0.00 0.00 4.26
5660 8219 2.301346 CAGAGTCCCAGCTGTTGTTTT 58.699 47.619 13.81 0.00 0.00 2.43
5725 8288 2.045524 CACTCATGGCTAGGTCCTGAT 58.954 52.381 0.00 0.00 0.00 2.90
5728 8291 3.141083 ACTCATGGCTAGGTCCTGATAGA 59.859 47.826 0.00 0.00 0.00 1.98
5729 8292 4.155709 CTCATGGCTAGGTCCTGATAGAA 58.844 47.826 0.00 0.00 0.00 2.10
5730 8293 4.756564 TCATGGCTAGGTCCTGATAGAAT 58.243 43.478 0.00 0.00 0.00 2.40
5731 8294 5.903923 TCATGGCTAGGTCCTGATAGAATA 58.096 41.667 0.00 0.00 0.00 1.75
5732 8295 5.954752 TCATGGCTAGGTCCTGATAGAATAG 59.045 44.000 0.00 0.00 0.00 1.73
5733 8296 5.600669 TGGCTAGGTCCTGATAGAATAGA 57.399 43.478 0.00 0.00 0.00 1.98
5734 8297 5.965486 TGGCTAGGTCCTGATAGAATAGAA 58.035 41.667 0.00 0.00 0.00 2.10
5764 8327 4.048970 ACCTAGACACTCTTGGCTTAGA 57.951 45.455 0.00 0.00 38.26 2.10
5765 8328 4.020543 ACCTAGACACTCTTGGCTTAGAG 58.979 47.826 13.37 13.37 38.26 2.43
5766 8329 3.181480 CCTAGACACTCTTGGCTTAGAGC 60.181 52.174 14.45 0.00 38.26 4.09
5767 8330 2.251818 AGACACTCTTGGCTTAGAGCA 58.748 47.619 14.45 0.00 38.26 4.26
5768 8331 2.836981 AGACACTCTTGGCTTAGAGCAT 59.163 45.455 14.45 5.65 38.26 3.79
5769 8332 3.118811 AGACACTCTTGGCTTAGAGCATC 60.119 47.826 14.45 12.29 38.26 3.91
5770 8333 5.360775 AGACACTCTTGGCTTAGAGCATCT 61.361 45.833 14.45 13.79 38.26 2.90
5771 8334 7.129275 AGACACTCTTGGCTTAGAGCATCTC 62.129 48.000 14.45 6.55 39.00 2.75
5772 8335 9.919717 TAGACACTCTTGGCTTAGAGCATCTCT 62.920 44.444 18.29 13.65 39.00 3.10
5773 8336 9.919717 AGACACTCTTGGCTTAGAGCATCTCTA 62.920 44.444 14.45 0.00 39.00 2.43
5782 8345 1.703411 GAGCATCTCTAGCAGACCCT 58.297 55.000 0.00 0.00 32.26 4.34
5783 8346 1.340889 GAGCATCTCTAGCAGACCCTG 59.659 57.143 0.00 0.00 32.26 4.45
5794 8357 2.205022 CAGACCCTGCAAAATCCTGA 57.795 50.000 0.00 0.00 0.00 3.86
5795 8358 1.815003 CAGACCCTGCAAAATCCTGAC 59.185 52.381 0.00 0.00 0.00 3.51
5796 8359 1.177401 GACCCTGCAAAATCCTGACC 58.823 55.000 0.00 0.00 0.00 4.02
5797 8360 0.251787 ACCCTGCAAAATCCTGACCC 60.252 55.000 0.00 0.00 0.00 4.46
5798 8361 1.315257 CCCTGCAAAATCCTGACCCG 61.315 60.000 0.00 0.00 0.00 5.28
5799 8362 1.508088 CTGCAAAATCCTGACCCGC 59.492 57.895 0.00 0.00 0.00 6.13
5800 8363 2.257286 CTGCAAAATCCTGACCCGCG 62.257 60.000 0.00 0.00 0.00 6.46
5801 8364 2.332654 GCAAAATCCTGACCCGCGT 61.333 57.895 4.92 0.00 0.00 6.01
5802 8365 1.022451 GCAAAATCCTGACCCGCGTA 61.022 55.000 4.92 0.00 0.00 4.42
5803 8366 1.444836 CAAAATCCTGACCCGCGTAA 58.555 50.000 4.92 0.00 0.00 3.18
5804 8367 1.396996 CAAAATCCTGACCCGCGTAAG 59.603 52.381 4.92 0.00 43.44 2.34
5805 8368 0.611714 AAATCCTGACCCGCGTAAGT 59.388 50.000 4.92 0.00 41.68 2.24
5806 8369 0.175073 AATCCTGACCCGCGTAAGTC 59.825 55.000 4.92 9.79 41.68 3.01
5807 8370 0.683504 ATCCTGACCCGCGTAAGTCT 60.684 55.000 18.20 0.38 41.68 3.24
5808 8371 0.896940 TCCTGACCCGCGTAAGTCTT 60.897 55.000 18.20 0.00 41.68 3.01
5809 8372 0.037605 CCTGACCCGCGTAAGTCTTT 60.038 55.000 18.20 0.00 41.68 2.52
5810 8373 1.607251 CCTGACCCGCGTAAGTCTTTT 60.607 52.381 18.20 0.00 41.68 2.27
5811 8374 1.459592 CTGACCCGCGTAAGTCTTTTG 59.540 52.381 18.20 6.33 41.68 2.44
5812 8375 0.165295 GACCCGCGTAAGTCTTTTGC 59.835 55.000 4.92 0.00 41.68 3.68
5813 8376 0.533308 ACCCGCGTAAGTCTTTTGCA 60.533 50.000 4.92 0.00 41.68 4.08
5814 8377 0.165944 CCCGCGTAAGTCTTTTGCAG 59.834 55.000 4.92 0.00 41.68 4.41
5815 8378 0.865769 CCGCGTAAGTCTTTTGCAGT 59.134 50.000 4.92 0.00 41.68 4.40
5816 8379 1.263217 CCGCGTAAGTCTTTTGCAGTT 59.737 47.619 4.92 0.00 41.68 3.16
5817 8380 2.560896 CGCGTAAGTCTTTTGCAGTTC 58.439 47.619 0.00 0.00 41.68 3.01
5818 8381 2.560896 GCGTAAGTCTTTTGCAGTTCG 58.439 47.619 0.00 0.00 41.68 3.95
5819 8382 2.033151 GCGTAAGTCTTTTGCAGTTCGT 60.033 45.455 0.00 0.00 41.68 3.85
5820 8383 3.531982 CGTAAGTCTTTTGCAGTTCGTG 58.468 45.455 0.00 0.00 0.00 4.35
5821 8384 3.603857 CGTAAGTCTTTTGCAGTTCGTGG 60.604 47.826 0.00 0.00 0.00 4.94
5822 8385 2.325583 AGTCTTTTGCAGTTCGTGGA 57.674 45.000 0.00 0.00 0.00 4.02
5823 8386 2.639065 AGTCTTTTGCAGTTCGTGGAA 58.361 42.857 0.00 0.00 34.08 3.53
5824 8387 3.013921 AGTCTTTTGCAGTTCGTGGAAA 58.986 40.909 0.00 0.00 44.07 3.13
5828 8391 2.791383 TTGCAGTTCGTGGAAAATGG 57.209 45.000 0.00 0.00 32.74 3.16
5829 8392 1.686355 TGCAGTTCGTGGAAAATGGT 58.314 45.000 0.00 0.00 0.00 3.55
5830 8393 2.852449 TGCAGTTCGTGGAAAATGGTA 58.148 42.857 0.00 0.00 0.00 3.25
5831 8394 3.417101 TGCAGTTCGTGGAAAATGGTAT 58.583 40.909 0.00 0.00 0.00 2.73
5832 8395 4.580868 TGCAGTTCGTGGAAAATGGTATA 58.419 39.130 0.00 0.00 0.00 1.47
5833 8396 5.189928 TGCAGTTCGTGGAAAATGGTATAT 58.810 37.500 0.00 0.00 0.00 0.86
5834 8397 5.065859 TGCAGTTCGTGGAAAATGGTATATG 59.934 40.000 0.00 0.00 0.00 1.78
5835 8398 5.510671 CAGTTCGTGGAAAATGGTATATGC 58.489 41.667 0.00 0.00 0.00 3.14
5836 8399 5.065859 CAGTTCGTGGAAAATGGTATATGCA 59.934 40.000 0.00 0.00 0.00 3.96
5837 8400 5.296780 AGTTCGTGGAAAATGGTATATGCAG 59.703 40.000 0.00 0.00 0.00 4.41
5838 8401 4.133820 TCGTGGAAAATGGTATATGCAGG 58.866 43.478 0.00 0.00 0.00 4.85
5839 8402 3.304659 CGTGGAAAATGGTATATGCAGGC 60.305 47.826 0.00 0.00 0.00 4.85
5840 8403 3.005791 GTGGAAAATGGTATATGCAGGCC 59.994 47.826 0.00 0.00 0.00 5.19
5841 8404 2.228822 GGAAAATGGTATATGCAGGCCG 59.771 50.000 0.00 0.00 0.00 6.13
5842 8405 1.909700 AAATGGTATATGCAGGCCGG 58.090 50.000 0.00 0.00 0.00 6.13
5843 8406 0.609131 AATGGTATATGCAGGCCGGC 60.609 55.000 22.10 22.10 0.00 6.13
5859 8422 4.373116 GCACGGGCGAGGACAGAA 62.373 66.667 0.00 0.00 0.00 3.02
5860 8423 2.125912 CACGGGCGAGGACAGAAG 60.126 66.667 0.00 0.00 0.00 2.85
5861 8424 2.282958 ACGGGCGAGGACAGAAGA 60.283 61.111 0.00 0.00 0.00 2.87
5862 8425 2.182030 CGGGCGAGGACAGAAGAC 59.818 66.667 0.00 0.00 0.00 3.01
5863 8426 2.344203 CGGGCGAGGACAGAAGACT 61.344 63.158 0.00 0.00 0.00 3.24
5864 8427 1.513622 GGGCGAGGACAGAAGACTC 59.486 63.158 0.00 0.00 0.00 3.36
5865 8428 0.968393 GGGCGAGGACAGAAGACTCT 60.968 60.000 0.00 0.00 0.00 3.24
5872 8435 2.581354 CAGAAGACTCTGGCCCCG 59.419 66.667 0.00 0.00 44.72 5.73
5873 8436 2.120718 AGAAGACTCTGGCCCCGT 59.879 61.111 0.00 0.00 0.00 5.28
5874 8437 0.970937 CAGAAGACTCTGGCCCCGTA 60.971 60.000 0.00 0.00 44.72 4.02
5875 8438 0.032017 AGAAGACTCTGGCCCCGTAT 60.032 55.000 0.00 0.00 0.00 3.06
5876 8439 1.217183 AGAAGACTCTGGCCCCGTATA 59.783 52.381 0.00 0.00 0.00 1.47
5877 8440 2.037144 GAAGACTCTGGCCCCGTATAA 58.963 52.381 0.00 0.00 0.00 0.98
5878 8441 2.400467 AGACTCTGGCCCCGTATAAT 57.600 50.000 0.00 0.00 0.00 1.28
5879 8442 2.249139 AGACTCTGGCCCCGTATAATC 58.751 52.381 0.00 0.00 0.00 1.75
5880 8443 1.968493 GACTCTGGCCCCGTATAATCA 59.032 52.381 0.00 0.00 0.00 2.57
5881 8444 2.367567 GACTCTGGCCCCGTATAATCAA 59.632 50.000 0.00 0.00 0.00 2.57
5882 8445 2.104281 ACTCTGGCCCCGTATAATCAAC 59.896 50.000 0.00 0.00 0.00 3.18
5883 8446 1.418637 TCTGGCCCCGTATAATCAACC 59.581 52.381 0.00 0.00 0.00 3.77
5884 8447 0.475044 TGGCCCCGTATAATCAACCC 59.525 55.000 0.00 0.00 0.00 4.11
5885 8448 0.604511 GGCCCCGTATAATCAACCCG 60.605 60.000 0.00 0.00 0.00 5.28
5886 8449 0.107268 GCCCCGTATAATCAACCCGT 59.893 55.000 0.00 0.00 0.00 5.28
5887 8450 1.344114 GCCCCGTATAATCAACCCGTA 59.656 52.381 0.00 0.00 0.00 4.02
5888 8451 2.224257 GCCCCGTATAATCAACCCGTAA 60.224 50.000 0.00 0.00 0.00 3.18
5889 8452 3.743899 GCCCCGTATAATCAACCCGTAAA 60.744 47.826 0.00 0.00 0.00 2.01
5890 8453 4.450053 CCCCGTATAATCAACCCGTAAAA 58.550 43.478 0.00 0.00 0.00 1.52
5891 8454 4.880696 CCCCGTATAATCAACCCGTAAAAA 59.119 41.667 0.00 0.00 0.00 1.94
5914 8477 9.991906 AAAAAGAATATTCTCCGAATATACCGA 57.008 29.630 18.19 0.00 36.28 4.69
5915 8478 9.991906 AAAAGAATATTCTCCGAATATACCGAA 57.008 29.630 18.19 0.00 36.28 4.30
5916 8479 8.983307 AAGAATATTCTCCGAATATACCGAAC 57.017 34.615 18.19 0.00 36.28 3.95
5917 8480 8.118976 AGAATATTCTCCGAATATACCGAACA 57.881 34.615 12.37 0.00 29.94 3.18
5918 8481 8.244802 AGAATATTCTCCGAATATACCGAACAG 58.755 37.037 12.37 0.00 29.94 3.16
5919 8482 7.698506 ATATTCTCCGAATATACCGAACAGA 57.301 36.000 7.19 0.00 0.00 3.41
5920 8483 4.825546 TCTCCGAATATACCGAACAGAC 57.174 45.455 0.00 0.00 0.00 3.51
5921 8484 3.567164 TCTCCGAATATACCGAACAGACC 59.433 47.826 0.00 0.00 0.00 3.85
5922 8485 3.559069 TCCGAATATACCGAACAGACCT 58.441 45.455 0.00 0.00 0.00 3.85
5923 8486 4.717877 TCCGAATATACCGAACAGACCTA 58.282 43.478 0.00 0.00 0.00 3.08
5924 8487 4.758674 TCCGAATATACCGAACAGACCTAG 59.241 45.833 0.00 0.00 0.00 3.02
5925 8488 4.758674 CCGAATATACCGAACAGACCTAGA 59.241 45.833 0.00 0.00 0.00 2.43
5926 8489 5.106634 CCGAATATACCGAACAGACCTAGAG 60.107 48.000 0.00 0.00 0.00 2.43
5927 8490 5.617308 CGAATATACCGAACAGACCTAGAGC 60.617 48.000 0.00 0.00 0.00 4.09
5928 8491 2.803030 TACCGAACAGACCTAGAGCT 57.197 50.000 0.00 0.00 0.00 4.09
5929 8492 2.803030 ACCGAACAGACCTAGAGCTA 57.197 50.000 0.00 0.00 0.00 3.32
5930 8493 2.645802 ACCGAACAGACCTAGAGCTAG 58.354 52.381 0.00 0.00 0.00 3.42
5931 8494 1.335496 CCGAACAGACCTAGAGCTAGC 59.665 57.143 6.62 6.62 31.95 3.42
5932 8495 2.294074 CGAACAGACCTAGAGCTAGCT 58.706 52.381 19.45 19.45 31.95 3.32
5933 8496 3.468770 CGAACAGACCTAGAGCTAGCTA 58.531 50.000 19.38 1.34 31.95 3.32
5934 8497 4.069304 CGAACAGACCTAGAGCTAGCTAT 58.931 47.826 19.38 18.26 31.95 2.97
5935 8498 4.517453 CGAACAGACCTAGAGCTAGCTATT 59.483 45.833 19.38 11.82 31.95 1.73
5936 8499 5.009210 CGAACAGACCTAGAGCTAGCTATTT 59.991 44.000 19.38 9.13 31.95 1.40
5937 8500 6.460399 CGAACAGACCTAGAGCTAGCTATTTT 60.460 42.308 19.38 6.49 31.95 1.82
5938 8501 6.800072 ACAGACCTAGAGCTAGCTATTTTT 57.200 37.500 19.38 1.88 31.95 1.94
5959 8522 5.668558 TTTTTAGTTGTCTTCTTCCTCGC 57.331 39.130 0.00 0.00 0.00 5.03
5960 8523 4.330944 TTTAGTTGTCTTCTTCCTCGCA 57.669 40.909 0.00 0.00 0.00 5.10
5961 8524 4.537135 TTAGTTGTCTTCTTCCTCGCAT 57.463 40.909 0.00 0.00 0.00 4.73
5962 8525 3.409026 AGTTGTCTTCTTCCTCGCATT 57.591 42.857 0.00 0.00 0.00 3.56
5963 8526 4.537135 AGTTGTCTTCTTCCTCGCATTA 57.463 40.909 0.00 0.00 0.00 1.90
5964 8527 4.894784 AGTTGTCTTCTTCCTCGCATTAA 58.105 39.130 0.00 0.00 0.00 1.40
5965 8528 5.491982 AGTTGTCTTCTTCCTCGCATTAAT 58.508 37.500 0.00 0.00 0.00 1.40
5966 8529 5.582665 AGTTGTCTTCTTCCTCGCATTAATC 59.417 40.000 0.00 0.00 0.00 1.75
5967 8530 5.084818 TGTCTTCTTCCTCGCATTAATCA 57.915 39.130 0.00 0.00 0.00 2.57
5968 8531 5.111989 TGTCTTCTTCCTCGCATTAATCAG 58.888 41.667 0.00 0.00 0.00 2.90
5969 8532 4.509600 GTCTTCTTCCTCGCATTAATCAGG 59.490 45.833 0.00 0.00 0.00 3.86
5970 8533 2.838736 TCTTCCTCGCATTAATCAGGC 58.161 47.619 0.00 0.00 0.00 4.85
5975 8538 1.564622 CGCATTAATCAGGCGGACG 59.435 57.895 10.02 0.00 46.46 4.79
5976 8539 0.874175 CGCATTAATCAGGCGGACGA 60.874 55.000 10.02 0.00 46.46 4.20
5977 8540 0.861837 GCATTAATCAGGCGGACGAG 59.138 55.000 0.00 0.00 0.00 4.18
5978 8541 1.502231 CATTAATCAGGCGGACGAGG 58.498 55.000 0.00 0.00 0.00 4.63
5979 8542 0.393077 ATTAATCAGGCGGACGAGGG 59.607 55.000 0.00 0.00 0.00 4.30
5980 8543 0.685131 TTAATCAGGCGGACGAGGGA 60.685 55.000 0.00 0.00 0.00 4.20
5981 8544 0.685131 TAATCAGGCGGACGAGGGAA 60.685 55.000 0.00 0.00 0.00 3.97
5982 8545 1.550130 AATCAGGCGGACGAGGGAAA 61.550 55.000 0.00 0.00 0.00 3.13
5983 8546 1.550130 ATCAGGCGGACGAGGGAAAA 61.550 55.000 0.00 0.00 0.00 2.29
5984 8547 2.033194 CAGGCGGACGAGGGAAAAC 61.033 63.158 0.00 0.00 0.00 2.43
5985 8548 3.116531 GGCGGACGAGGGAAAACG 61.117 66.667 0.00 0.00 0.00 3.60
5986 8549 3.785499 GCGGACGAGGGAAAACGC 61.785 66.667 0.00 0.00 40.19 4.84
5987 8550 3.475774 CGGACGAGGGAAAACGCG 61.476 66.667 3.53 3.53 39.59 6.01
5988 8551 2.048877 GGACGAGGGAAAACGCGA 60.049 61.111 15.93 0.00 37.12 5.87
5989 8552 2.092882 GGACGAGGGAAAACGCGAG 61.093 63.158 15.93 0.00 37.12 5.03
5990 8553 2.048503 ACGAGGGAAAACGCGAGG 60.049 61.111 15.93 0.00 37.12 4.63
5991 8554 3.488090 CGAGGGAAAACGCGAGGC 61.488 66.667 15.93 0.00 35.64 4.70
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 5.356426 TGGATACGTGTGATGTTTATCCAG 58.644 41.667 6.77 0.00 42.06 3.86
21 22 1.048601 ATGCTCGGGAATGGATACGT 58.951 50.000 0.00 0.00 42.51 3.57
32 33 9.669353 GCATATATTATTAAATGAATGCTCGGG 57.331 33.333 0.00 0.00 39.29 5.14
52 53 5.676552 ACAAGTGGGACGTAAATGCATATA 58.323 37.500 0.00 0.00 0.00 0.86
65 66 2.164827 ACGTTTCCAAAACAAGTGGGAC 59.835 45.455 3.72 0.00 36.73 4.46
66 67 2.164624 CACGTTTCCAAAACAAGTGGGA 59.835 45.455 3.72 0.00 36.73 4.37
68 69 2.164624 TCCACGTTTCCAAAACAAGTGG 59.835 45.455 16.86 16.86 46.36 4.00
69 70 3.495670 TCCACGTTTCCAAAACAAGTG 57.504 42.857 3.72 4.20 0.00 3.16
84 85 4.507710 TCTTCTCATCTCCATTTTCCACG 58.492 43.478 0.00 0.00 0.00 4.94
85 86 4.335037 GCTCTTCTCATCTCCATTTTCCAC 59.665 45.833 0.00 0.00 0.00 4.02
95 96 3.034635 TGGGTAAGGCTCTTCTCATCTC 58.965 50.000 0.00 0.00 0.00 2.75
97 98 3.914426 TTGGGTAAGGCTCTTCTCATC 57.086 47.619 0.00 0.00 0.00 2.92
100 101 2.483889 CGGATTGGGTAAGGCTCTTCTC 60.484 54.545 0.00 0.00 0.00 2.87
113 114 1.522569 GAGGTGGAGACGGATTGGG 59.477 63.158 0.00 0.00 0.00 4.12
121 122 1.730451 GCTAGCGAGGAGGTGGAGAC 61.730 65.000 0.00 0.00 0.00 3.36
123 124 2.494530 GGCTAGCGAGGAGGTGGAG 61.495 68.421 9.00 0.00 0.00 3.86
125 126 2.642183 TAGGGCTAGCGAGGAGGTGG 62.642 65.000 9.00 0.00 0.00 4.61
141 142 4.120589 GAGTGAATAAAAGCGGAGGTAGG 58.879 47.826 0.00 0.00 37.06 3.18
149 150 8.715998 AGATAATATGCAGAGTGAATAAAAGCG 58.284 33.333 0.00 0.00 0.00 4.68
232 233 7.546444 TGGATGGGGTACTAGTTATGGTATTA 58.454 38.462 0.00 0.00 0.00 0.98
233 234 6.395598 TGGATGGGGTACTAGTTATGGTATT 58.604 40.000 0.00 0.00 0.00 1.89
235 236 5.421740 TGGATGGGGTACTAGTTATGGTA 57.578 43.478 0.00 0.00 0.00 3.25
236 237 4.289837 TGGATGGGGTACTAGTTATGGT 57.710 45.455 0.00 0.00 0.00 3.55
237 238 5.309543 TGAATGGATGGGGTACTAGTTATGG 59.690 44.000 0.00 0.00 0.00 2.74
238 239 6.183361 TGTGAATGGATGGGGTACTAGTTATG 60.183 42.308 0.00 0.00 0.00 1.90
240 241 5.282129 TGTGAATGGATGGGGTACTAGTTA 58.718 41.667 0.00 0.00 0.00 2.24
241 242 4.108570 TGTGAATGGATGGGGTACTAGTT 58.891 43.478 0.00 0.00 0.00 2.24
242 243 3.731431 TGTGAATGGATGGGGTACTAGT 58.269 45.455 0.00 0.00 0.00 2.57
243 244 4.771114 TTGTGAATGGATGGGGTACTAG 57.229 45.455 0.00 0.00 0.00 2.57
244 245 5.725551 ATTTGTGAATGGATGGGGTACTA 57.274 39.130 0.00 0.00 0.00 1.82
245 246 4.608170 ATTTGTGAATGGATGGGGTACT 57.392 40.909 0.00 0.00 0.00 2.73
246 247 7.942341 TCTTATATTTGTGAATGGATGGGGTAC 59.058 37.037 0.00 0.00 0.00 3.34
247 248 8.051468 TCTTATATTTGTGAATGGATGGGGTA 57.949 34.615 0.00 0.00 0.00 3.69
248 249 6.921412 TCTTATATTTGTGAATGGATGGGGT 58.079 36.000 0.00 0.00 0.00 4.95
250 251 8.413309 ACATCTTATATTTGTGAATGGATGGG 57.587 34.615 0.00 0.00 34.29 4.00
291 292 8.043710 GCTAATTTCAGTCTATATGTAGGCCAT 58.956 37.037 5.01 0.00 32.85 4.40
292 293 7.386851 GCTAATTTCAGTCTATATGTAGGCCA 58.613 38.462 5.01 0.00 32.85 5.36
293 294 6.531948 CGCTAATTTCAGTCTATATGTAGGCC 59.468 42.308 0.00 0.00 32.85 5.19
294 295 7.313646 TCGCTAATTTCAGTCTATATGTAGGC 58.686 38.462 0.00 0.00 32.58 3.93
295 296 9.130312 GTTCGCTAATTTCAGTCTATATGTAGG 57.870 37.037 0.00 0.00 0.00 3.18
296 297 8.841822 CGTTCGCTAATTTCAGTCTATATGTAG 58.158 37.037 0.00 0.00 0.00 2.74
297 298 8.562052 TCGTTCGCTAATTTCAGTCTATATGTA 58.438 33.333 0.00 0.00 0.00 2.29
299 300 7.853377 TCGTTCGCTAATTTCAGTCTATATG 57.147 36.000 0.00 0.00 0.00 1.78
301 302 9.390795 GTATTCGTTCGCTAATTTCAGTCTATA 57.609 33.333 0.00 0.00 0.00 1.31
303 304 7.252708 TGTATTCGTTCGCTAATTTCAGTCTA 58.747 34.615 0.00 0.00 0.00 2.59
305 306 6.327177 TGTATTCGTTCGCTAATTTCAGTC 57.673 37.500 0.00 0.00 0.00 3.51
306 307 6.715344 TTGTATTCGTTCGCTAATTTCAGT 57.285 33.333 0.00 0.00 0.00 3.41
307 308 9.697250 TTTATTGTATTCGTTCGCTAATTTCAG 57.303 29.630 0.00 0.00 0.00 3.02
311 312 8.170553 ACGTTTTATTGTATTCGTTCGCTAATT 58.829 29.630 0.00 0.00 0.00 1.40
312 313 7.633281 CACGTTTTATTGTATTCGTTCGCTAAT 59.367 33.333 0.00 0.00 0.00 1.73
313 314 6.949327 CACGTTTTATTGTATTCGTTCGCTAA 59.051 34.615 0.00 0.00 0.00 3.09
314 315 6.089283 ACACGTTTTATTGTATTCGTTCGCTA 59.911 34.615 0.00 0.00 0.00 4.26
315 316 5.107375 ACACGTTTTATTGTATTCGTTCGCT 60.107 36.000 0.00 0.00 0.00 4.93
317 318 5.439425 CGACACGTTTTATTGTATTCGTTCG 59.561 40.000 0.00 0.00 0.00 3.95
318 319 6.456436 GTCGACACGTTTTATTGTATTCGTTC 59.544 38.462 11.55 0.00 0.00 3.95
319 320 6.291385 GTCGACACGTTTTATTGTATTCGTT 58.709 36.000 11.55 0.00 0.00 3.85
321 322 4.939801 CGTCGACACGTTTTATTGTATTCG 59.060 41.667 17.16 0.00 41.42 3.34
336 337 9.405083 CACATTAAATATCTAAAACGTCGACAC 57.595 33.333 17.16 0.00 0.00 3.67
338 339 8.810427 TCCACATTAAATATCTAAAACGTCGAC 58.190 33.333 5.18 5.18 0.00 4.20
340 341 8.814235 AGTCCACATTAAATATCTAAAACGTCG 58.186 33.333 0.00 0.00 0.00 5.12
360 361 5.434352 TCGCTTCAGTATGTATAGTCCAC 57.566 43.478 0.00 0.00 37.40 4.02
361 362 4.023107 GCTCGCTTCAGTATGTATAGTCCA 60.023 45.833 0.00 0.00 37.40 4.02
362 363 4.477780 GCTCGCTTCAGTATGTATAGTCC 58.522 47.826 0.00 0.00 37.40 3.85
376 377 4.399840 CGTTTGTTCGCTCGCTTC 57.600 55.556 0.00 0.00 0.00 3.86
384 385 3.514825 GCGATTTTATGCGTTTGTTCG 57.485 42.857 0.00 0.00 0.00 3.95
393 394 7.556433 GGATGTATATAGACGCGATTTTATGC 58.444 38.462 15.93 9.26 0.00 3.14
401 402 3.593096 AGTCGGATGTATATAGACGCGA 58.407 45.455 15.93 0.00 36.97 5.87
435 629 9.485591 TTCGTTTCGAATTATAAGATTTTCTGC 57.514 29.630 0.00 0.00 41.05 4.26
441 635 7.494625 TGCTCCTTCGTTTCGAATTATAAGATT 59.505 33.333 0.00 0.00 44.85 2.40
503 697 4.162690 AGTGGATCCGGCGCCTTC 62.163 66.667 26.68 17.81 0.00 3.46
504 698 4.473520 CAGTGGATCCGGCGCCTT 62.474 66.667 26.68 9.24 0.00 4.35
506 700 2.862674 TAAACAGTGGATCCGGCGCC 62.863 60.000 19.07 19.07 0.00 6.53
509 703 3.769536 CATTTTAAACAGTGGATCCGGC 58.230 45.455 7.39 2.37 0.00 6.13
710 925 3.503363 GTGATCCCGCTGCTGTGC 61.503 66.667 0.00 0.00 0.00 4.57
739 959 4.633175 GTCTCTTTTCTCTTCGGTTTCCT 58.367 43.478 0.00 0.00 0.00 3.36
740 960 3.429207 CGTCTCTTTTCTCTTCGGTTTCC 59.571 47.826 0.00 0.00 0.00 3.13
741 961 4.296690 TCGTCTCTTTTCTCTTCGGTTTC 58.703 43.478 0.00 0.00 0.00 2.78
742 962 4.037684 TCTCGTCTCTTTTCTCTTCGGTTT 59.962 41.667 0.00 0.00 0.00 3.27
743 963 3.568853 TCTCGTCTCTTTTCTCTTCGGTT 59.431 43.478 0.00 0.00 0.00 4.44
747 967 5.627780 GTGTTCTCTCGTCTCTTTTCTCTTC 59.372 44.000 0.00 0.00 0.00 2.87
862 1097 1.537135 CGCCCCGCAGAAAAAGAAAAA 60.537 47.619 0.00 0.00 0.00 1.94
864 1099 0.820074 TCGCCCCGCAGAAAAAGAAA 60.820 50.000 0.00 0.00 0.00 2.52
867 1102 2.690778 CCTCGCCCCGCAGAAAAAG 61.691 63.158 0.00 0.00 0.00 2.27
868 1103 2.671619 CCTCGCCCCGCAGAAAAA 60.672 61.111 0.00 0.00 0.00 1.94
911 1173 2.118233 GAGATTGGGGGAGGATCGGC 62.118 65.000 0.00 0.00 34.37 5.54
1924 3410 4.081087 TGGCACTAATCTGGAGTTTAGTCC 60.081 45.833 7.03 10.61 38.05 3.85
1931 3421 4.471386 ACAATAGTGGCACTAATCTGGAGT 59.529 41.667 29.35 13.10 33.89 3.85
1935 3425 5.423015 ACAGACAATAGTGGCACTAATCTG 58.577 41.667 35.77 35.77 40.85 2.90
1996 3486 3.361053 CACAAGACAAGTCGTAGCGTAAG 59.639 47.826 0.00 0.00 35.70 2.34
2037 3527 2.593468 ATTGATGGGGACTGACGGCG 62.593 60.000 4.80 4.80 0.00 6.46
2093 3686 3.186909 TCTCGTTGATCTGCATAAACGG 58.813 45.455 17.59 11.44 44.34 4.44
2099 3716 2.101415 TCCGAATCTCGTTGATCTGCAT 59.899 45.455 0.00 0.00 38.40 3.96
2317 3934 3.896648 TCACGATGGAAGAAAGCAAAC 57.103 42.857 0.00 0.00 0.00 2.93
2418 4054 2.294512 CTGAGCTGGCATCAGACGTATA 59.705 50.000 11.80 0.00 45.80 1.47
2429 4065 2.204074 TTACCCCCTGAGCTGGCA 60.204 61.111 0.00 0.00 0.00 4.92
2431 4067 1.616628 AGGTTACCCCCTGAGCTGG 60.617 63.158 0.00 0.00 32.11 4.85
2439 4075 0.255033 ATTTCGCTCAGGTTACCCCC 59.745 55.000 0.00 0.00 0.00 5.40
2458 4094 1.048724 CCTAGCTGGGGGAACGATCA 61.049 60.000 8.57 0.00 0.00 2.92
2473 4109 1.706443 GTTCGTTCGTTCCACCCTAG 58.294 55.000 0.00 0.00 0.00 3.02
2474 4110 0.039256 CGTTCGTTCGTTCCACCCTA 60.039 55.000 0.00 0.00 0.00 3.53
2584 4223 8.555361 GCAATTTTTACTTTAGAACATGGCAAA 58.445 29.630 0.00 0.00 0.00 3.68
2665 4304 4.322804 GCATGACAATTCTCAGCTTTTTCG 59.677 41.667 0.00 0.00 0.00 3.46
2677 4316 5.451908 TCAGTTTTTCGAGCATGACAATTC 58.548 37.500 0.00 0.00 0.00 2.17
2683 4322 3.606846 CGCTTTCAGTTTTTCGAGCATGA 60.607 43.478 0.00 0.00 0.00 3.07
2691 4330 2.328473 GGATGGCGCTTTCAGTTTTTC 58.672 47.619 7.64 0.00 0.00 2.29
2704 4343 1.721487 GAACACATTCGGGATGGCG 59.279 57.895 0.55 0.00 40.21 5.69
2735 4374 1.505425 GGCGAACTACGAAACTGGTT 58.495 50.000 0.00 0.00 45.77 3.67
2741 4380 0.245539 CCTCTGGGCGAACTACGAAA 59.754 55.000 0.00 0.00 45.77 3.46
2764 4403 1.981256 AAAGTGTTTCGCTCCCATGT 58.019 45.000 0.00 0.00 0.00 3.21
2775 4414 3.067461 TGCGCACAAATCCTAAAGTGTTT 59.933 39.130 5.66 0.00 34.59 2.83
2794 4433 3.499737 GGCACGTTGGATCCTGCG 61.500 66.667 21.17 21.17 0.00 5.18
2880 4519 6.191657 ACCATCATCTAACAAGCCATCATA 57.808 37.500 0.00 0.00 0.00 2.15
2881 4520 5.057843 ACCATCATCTAACAAGCCATCAT 57.942 39.130 0.00 0.00 0.00 2.45
2966 4915 7.025963 CCAGTTGCTTCATTCATAAAACTCTC 58.974 38.462 0.00 0.00 0.00 3.20
2971 4921 5.465532 TGCCAGTTGCTTCATTCATAAAA 57.534 34.783 0.00 0.00 42.00 1.52
2972 4922 5.185442 TCATGCCAGTTGCTTCATTCATAAA 59.815 36.000 0.00 0.00 42.00 1.40
3032 4986 7.748683 CGCTTTCTATTGCATAACAACTAACAA 59.251 33.333 0.00 0.00 42.27 2.83
3033 4987 7.240674 CGCTTTCTATTGCATAACAACTAACA 58.759 34.615 0.00 0.00 42.27 2.41
3034 4988 6.687105 CCGCTTTCTATTGCATAACAACTAAC 59.313 38.462 0.00 0.00 42.27 2.34
3035 4989 6.676943 GCCGCTTTCTATTGCATAACAACTAA 60.677 38.462 0.00 0.00 42.27 2.24
3036 4990 5.220777 GCCGCTTTCTATTGCATAACAACTA 60.221 40.000 0.00 0.00 42.27 2.24
3037 4991 4.438744 GCCGCTTTCTATTGCATAACAACT 60.439 41.667 0.00 0.00 42.27 3.16
3038 4992 3.791353 GCCGCTTTCTATTGCATAACAAC 59.209 43.478 0.00 0.00 42.27 3.32
3125 5079 3.358111 TGAAAACAACTGGAGTCCACA 57.642 42.857 8.12 0.00 0.00 4.17
3159 5113 5.248380 AGAGATTGGACAAAAAGGTAGCT 57.752 39.130 0.00 0.00 0.00 3.32
3410 5827 9.672673 AATCAGCAACAGTAAACTATATGAAGT 57.327 29.630 0.00 0.00 0.00 3.01
3418 5835 7.429636 GGTGTTAATCAGCAACAGTAAACTA 57.570 36.000 0.00 0.00 43.22 2.24
3419 5836 6.313744 GGTGTTAATCAGCAACAGTAAACT 57.686 37.500 0.00 0.00 43.22 2.66
3451 5889 9.463443 AAAAAGATAAATTGCTATGAATACGGC 57.537 29.630 0.00 0.00 0.00 5.68
3468 5935 9.023962 AGCACCAAAGATATGTGAAAAAGATAA 57.976 29.630 0.00 0.00 31.66 1.75
3471 5938 6.899393 AGCACCAAAGATATGTGAAAAAGA 57.101 33.333 0.00 0.00 31.66 2.52
3525 5993 4.431809 TGTCAGAACAAAAATTGCCTGTG 58.568 39.130 10.69 0.66 36.58 3.66
3774 6242 4.401022 TCTCAACATTTTGTGCAGGATCT 58.599 39.130 0.00 0.00 34.02 2.75
3858 6326 3.219176 ACCTCAATGGATGGCATAGTG 57.781 47.619 0.00 0.00 39.71 2.74
3974 6442 6.035217 TCATCAATGCGTGGATAACAAAATG 58.965 36.000 0.00 0.00 0.00 2.32
4010 6478 3.772025 TCTTGAGAAAGGATCAGGGTCTC 59.228 47.826 0.00 1.76 36.17 3.36
4041 6509 8.854614 AGGATGCCATCTAACTGATTAAATAC 57.145 34.615 4.41 0.00 32.05 1.89
4046 6514 7.455953 ACATAGAGGATGCCATCTAACTGATTA 59.544 37.037 4.41 0.00 39.39 1.75
4052 6520 5.474578 TCACATAGAGGATGCCATCTAAC 57.525 43.478 4.41 0.00 39.39 2.34
4121 6591 2.845363 TTTTGGAACGGAGGGAGTAC 57.155 50.000 0.00 0.00 0.00 2.73
4127 6597 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
4128 6598 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
4168 6638 9.716531 GACCCAACTTTATACTAACTTTGTACT 57.283 33.333 0.00 0.00 0.00 2.73
4171 6641 9.227777 GATGACCCAACTTTATACTAACTTTGT 57.772 33.333 0.00 0.00 0.00 2.83
4172 6642 9.449719 AGATGACCCAACTTTATACTAACTTTG 57.550 33.333 0.00 0.00 0.00 2.77
4187 6657 6.110707 TCCGTTCTAAAATAGATGACCCAAC 58.889 40.000 0.00 0.00 34.22 3.77
4190 6660 5.298347 CCTCCGTTCTAAAATAGATGACCC 58.702 45.833 0.00 0.00 34.22 4.46
4192 6662 6.158023 TCCCTCCGTTCTAAAATAGATGAC 57.842 41.667 0.00 0.00 34.22 3.06
4193 6663 5.897824 ACTCCCTCCGTTCTAAAATAGATGA 59.102 40.000 0.00 0.00 34.22 2.92
4194 6664 6.163135 ACTCCCTCCGTTCTAAAATAGATG 57.837 41.667 0.00 0.00 34.22 2.90
4196 6666 7.909485 AATACTCCCTCCGTTCTAAAATAGA 57.091 36.000 0.00 0.00 0.00 1.98
4197 6667 8.827677 CAAAATACTCCCTCCGTTCTAAAATAG 58.172 37.037 0.00 0.00 0.00 1.73
4198 6668 8.323567 ACAAAATACTCCCTCCGTTCTAAAATA 58.676 33.333 0.00 0.00 0.00 1.40
4200 6670 6.536447 ACAAAATACTCCCTCCGTTCTAAAA 58.464 36.000 0.00 0.00 0.00 1.52
4201 6671 6.117975 ACAAAATACTCCCTCCGTTCTAAA 57.882 37.500 0.00 0.00 0.00 1.85
4202 6672 5.750352 ACAAAATACTCCCTCCGTTCTAA 57.250 39.130 0.00 0.00 0.00 2.10
4203 6673 6.608405 TGATACAAAATACTCCCTCCGTTCTA 59.392 38.462 0.00 0.00 0.00 2.10
4204 6674 5.424252 TGATACAAAATACTCCCTCCGTTCT 59.576 40.000 0.00 0.00 0.00 3.01
4205 6675 5.667466 TGATACAAAATACTCCCTCCGTTC 58.333 41.667 0.00 0.00 0.00 3.95
4206 6676 5.687166 TGATACAAAATACTCCCTCCGTT 57.313 39.130 0.00 0.00 0.00 4.44
4207 6677 5.611374 CATGATACAAAATACTCCCTCCGT 58.389 41.667 0.00 0.00 0.00 4.69
4208 6678 4.452455 GCATGATACAAAATACTCCCTCCG 59.548 45.833 0.00 0.00 0.00 4.63
4209 6679 4.762251 GGCATGATACAAAATACTCCCTCC 59.238 45.833 0.00 0.00 0.00 4.30
4210 6680 4.452455 CGGCATGATACAAAATACTCCCTC 59.548 45.833 0.00 0.00 0.00 4.30
4211 6681 4.141482 ACGGCATGATACAAAATACTCCCT 60.141 41.667 0.00 0.00 0.00 4.20
4212 6682 4.134563 ACGGCATGATACAAAATACTCCC 58.865 43.478 0.00 0.00 0.00 4.30
4213 6683 5.295787 TCAACGGCATGATACAAAATACTCC 59.704 40.000 0.00 0.00 0.00 3.85
4214 6684 6.358118 TCAACGGCATGATACAAAATACTC 57.642 37.500 0.00 0.00 0.00 2.59
4215 6685 6.017109 GGATCAACGGCATGATACAAAATACT 60.017 38.462 0.00 0.00 39.93 2.12
4216 6686 6.017109 AGGATCAACGGCATGATACAAAATAC 60.017 38.462 13.27 0.00 42.19 1.89
4217 6687 6.061441 AGGATCAACGGCATGATACAAAATA 58.939 36.000 13.27 0.00 42.19 1.40
4220 6690 3.884895 AGGATCAACGGCATGATACAAA 58.115 40.909 13.27 0.00 42.19 2.83
4232 6702 5.178797 GGTGGGATCATTATAGGATCAACG 58.821 45.833 14.70 0.00 42.31 4.10
4248 6718 4.288105 TGTTTGCAATTAAATGGGTGGGAT 59.712 37.500 0.00 0.00 0.00 3.85
4327 6797 2.159057 GCCCCATTTATGACAGCTTTGG 60.159 50.000 0.00 0.00 0.00 3.28
4328 6798 2.762327 AGCCCCATTTATGACAGCTTTG 59.238 45.455 0.00 0.00 0.00 2.77
4332 6802 2.378038 TCAAGCCCCATTTATGACAGC 58.622 47.619 0.00 0.00 0.00 4.40
4340 6815 4.141528 TGACAACAAAATCAAGCCCCATTT 60.142 37.500 0.00 0.00 0.00 2.32
4341 6816 3.390639 TGACAACAAAATCAAGCCCCATT 59.609 39.130 0.00 0.00 0.00 3.16
4344 6819 3.006752 TCATGACAACAAAATCAAGCCCC 59.993 43.478 0.00 0.00 0.00 5.80
4381 6863 9.382275 GAACATGCCATCTGGTTATTTTAAAAT 57.618 29.630 17.18 17.18 37.57 1.82
4384 6866 7.473735 TGAACATGCCATCTGGTTATTTTAA 57.526 32.000 0.00 0.00 37.57 1.52
4385 6867 6.405731 GCTGAACATGCCATCTGGTTATTTTA 60.406 38.462 0.00 0.00 37.57 1.52
4388 6870 3.382546 GCTGAACATGCCATCTGGTTATT 59.617 43.478 0.00 0.00 37.57 1.40
4389 6871 2.954318 GCTGAACATGCCATCTGGTTAT 59.046 45.455 0.00 0.00 37.57 1.89
4420 6912 9.424319 TGTACAGAGCTTATTCTAAAGAACAAG 57.576 33.333 6.41 6.41 40.49 3.16
4422 6914 9.371136 CATGTACAGAGCTTATTCTAAAGAACA 57.629 33.333 0.33 0.00 36.80 3.18
4423 6915 8.331742 GCATGTACAGAGCTTATTCTAAAGAAC 58.668 37.037 14.02 0.00 36.80 3.01
4445 6940 3.816523 GGGATAAAATTGGCATTGGCATG 59.183 43.478 14.21 0.00 43.71 4.06
4509 7010 8.038944 CAGCAAACCAAAGGAATAGTACTAGTA 58.961 37.037 8.85 0.00 0.00 1.82
4510 7011 6.879458 CAGCAAACCAAAGGAATAGTACTAGT 59.121 38.462 8.85 5.54 0.00 2.57
4511 7012 6.879458 ACAGCAAACCAAAGGAATAGTACTAG 59.121 38.462 8.85 0.00 0.00 2.57
4512 7013 6.775708 ACAGCAAACCAAAGGAATAGTACTA 58.224 36.000 4.77 4.77 0.00 1.82
4513 7014 5.631119 ACAGCAAACCAAAGGAATAGTACT 58.369 37.500 0.00 0.00 0.00 2.73
4514 7015 5.959618 ACAGCAAACCAAAGGAATAGTAC 57.040 39.130 0.00 0.00 0.00 2.73
4546 7047 6.018913 TGACGAAAAGTACGAAAACAATAGCA 60.019 34.615 0.00 0.00 34.70 3.49
4555 7056 3.430895 GGCTGATGACGAAAAGTACGAAA 59.569 43.478 0.00 0.00 34.70 3.46
4556 7057 2.991190 GGCTGATGACGAAAAGTACGAA 59.009 45.455 0.00 0.00 34.70 3.85
4557 7058 2.029739 TGGCTGATGACGAAAAGTACGA 60.030 45.455 0.00 0.00 34.70 3.43
4558 7059 2.333926 TGGCTGATGACGAAAAGTACG 58.666 47.619 0.00 0.00 0.00 3.67
4559 7060 2.094417 GCTGGCTGATGACGAAAAGTAC 59.906 50.000 0.00 0.00 0.00 2.73
4560 7061 2.028112 AGCTGGCTGATGACGAAAAGTA 60.028 45.455 0.00 0.00 0.00 2.24
4561 7062 1.160137 GCTGGCTGATGACGAAAAGT 58.840 50.000 0.00 0.00 0.00 2.66
4562 7063 1.396301 GAGCTGGCTGATGACGAAAAG 59.604 52.381 0.00 0.00 0.00 2.27
4732 7238 8.554870 ACAAACCCATCAGCTCATATCATATAT 58.445 33.333 0.00 0.00 0.00 0.86
4733 7239 7.921304 ACAAACCCATCAGCTCATATCATATA 58.079 34.615 0.00 0.00 0.00 0.86
4734 7240 6.787170 ACAAACCCATCAGCTCATATCATAT 58.213 36.000 0.00 0.00 0.00 1.78
4735 7241 6.191657 ACAAACCCATCAGCTCATATCATA 57.808 37.500 0.00 0.00 0.00 2.15
4736 7242 5.057843 ACAAACCCATCAGCTCATATCAT 57.942 39.130 0.00 0.00 0.00 2.45
4737 7243 4.508551 ACAAACCCATCAGCTCATATCA 57.491 40.909 0.00 0.00 0.00 2.15
4921 7427 1.069978 GCAGAGATAAGGGACAGCTCC 59.930 57.143 0.00 0.00 35.50 4.70
4954 7460 1.451028 GTGGCTCTGGACCAGATGC 60.451 63.158 24.51 25.26 39.92 3.91
5075 7585 1.665735 CCGGCGAACATTTTGAGTTGG 60.666 52.381 9.30 0.00 0.00 3.77
5076 7586 1.265635 TCCGGCGAACATTTTGAGTTG 59.734 47.619 9.30 0.00 0.00 3.16
5077 7587 1.600023 TCCGGCGAACATTTTGAGTT 58.400 45.000 9.30 0.00 0.00 3.01
5078 7588 1.468520 CATCCGGCGAACATTTTGAGT 59.531 47.619 9.30 0.00 0.00 3.41
5079 7589 1.468520 ACATCCGGCGAACATTTTGAG 59.531 47.619 9.30 0.00 0.00 3.02
5080 7590 1.529226 ACATCCGGCGAACATTTTGA 58.471 45.000 9.30 0.00 0.00 2.69
5081 7591 3.691049 ATACATCCGGCGAACATTTTG 57.309 42.857 9.30 0.00 0.00 2.44
5082 7592 5.529430 TGATTATACATCCGGCGAACATTTT 59.471 36.000 9.30 0.00 0.00 1.82
5098 7608 4.772886 AGGTGAAGGGGTGTGATTATAC 57.227 45.455 0.00 0.00 0.00 1.47
5106 7616 3.981313 ACGAAGGTGAAGGGGTGT 58.019 55.556 0.00 0.00 0.00 4.16
5136 7646 4.034285 GGAATCAACTTCCCTTCCTTGA 57.966 45.455 0.00 0.00 46.81 3.02
5331 7858 4.962836 ACACTGGGTGGCTGCTGC 62.963 66.667 7.10 7.10 37.94 5.25
5345 7872 0.522495 AAAACAAGACGCGCACACAC 60.522 50.000 5.73 0.00 0.00 3.82
5346 7873 0.169230 AAAAACAAGACGCGCACACA 59.831 45.000 5.73 0.00 0.00 3.72
5347 7874 0.837605 GAAAAACAAGACGCGCACAC 59.162 50.000 5.73 0.00 0.00 3.82
5348 7875 0.248296 GGAAAAACAAGACGCGCACA 60.248 50.000 5.73 0.00 0.00 4.57
5365 7896 2.233922 GGTCAGAAGATTCAAGACGGGA 59.766 50.000 10.22 0.00 36.19 5.14
5429 7961 1.739067 AGCATTCCTGAAGCGGTAAC 58.261 50.000 0.00 0.00 0.00 2.50
5430 7962 2.083774 CAAGCATTCCTGAAGCGGTAA 58.916 47.619 0.00 0.00 0.00 2.85
5431 7963 1.003118 ACAAGCATTCCTGAAGCGGTA 59.997 47.619 0.00 0.00 0.00 4.02
5432 7964 0.250901 ACAAGCATTCCTGAAGCGGT 60.251 50.000 0.00 0.00 0.00 5.68
5433 7965 1.667724 CTACAAGCATTCCTGAAGCGG 59.332 52.381 0.00 0.00 0.00 5.52
5468 8016 5.659048 AGATCAAACAGACGAAACAGAAC 57.341 39.130 0.00 0.00 0.00 3.01
5472 8020 4.878971 TGGAAAGATCAAACAGACGAAACA 59.121 37.500 0.00 0.00 0.00 2.83
5494 8042 1.683011 CCAAGGGCAACAGGTAGGATG 60.683 57.143 0.00 0.00 39.74 3.51
5599 8147 2.817538 AAAACAAACACGGTCACGAG 57.182 45.000 0.00 0.00 44.60 4.18
5623 8182 1.939934 TCTGCCGAGGCGATTAATTTG 59.060 47.619 9.78 0.00 45.51 2.32
5678 8241 5.123820 GCCATGCTTGTGTGACTAATTTCTA 59.876 40.000 0.00 0.00 0.00 2.10
5742 8305 5.188988 TCTAAGCCAAGAGTGTCTAGGTA 57.811 43.478 0.00 0.00 0.00 3.08
5744 8307 3.181480 GCTCTAAGCCAAGAGTGTCTAGG 60.181 52.174 12.99 0.00 44.13 3.02
5764 8327 1.412079 CAGGGTCTGCTAGAGATGCT 58.588 55.000 0.00 0.00 31.63 3.79
5765 8328 3.984838 CAGGGTCTGCTAGAGATGC 57.015 57.895 0.00 0.00 31.63 3.91
5775 8338 1.815003 GTCAGGATTTTGCAGGGTCTG 59.185 52.381 0.00 0.00 34.12 3.51
5776 8339 1.272147 GGTCAGGATTTTGCAGGGTCT 60.272 52.381 0.00 0.00 0.00 3.85
5777 8340 1.177401 GGTCAGGATTTTGCAGGGTC 58.823 55.000 0.00 0.00 0.00 4.46
5778 8341 0.251787 GGGTCAGGATTTTGCAGGGT 60.252 55.000 0.00 0.00 0.00 4.34
5779 8342 1.315257 CGGGTCAGGATTTTGCAGGG 61.315 60.000 0.00 0.00 0.00 4.45
5780 8343 1.937546 GCGGGTCAGGATTTTGCAGG 61.938 60.000 0.00 0.00 0.00 4.85
5781 8344 1.508088 GCGGGTCAGGATTTTGCAG 59.492 57.895 0.00 0.00 0.00 4.41
5782 8345 2.331893 CGCGGGTCAGGATTTTGCA 61.332 57.895 0.00 0.00 0.00 4.08
5783 8346 1.022451 TACGCGGGTCAGGATTTTGC 61.022 55.000 12.47 0.00 0.00 3.68
5784 8347 1.396996 CTTACGCGGGTCAGGATTTTG 59.603 52.381 12.47 0.00 0.00 2.44
5785 8348 1.002773 ACTTACGCGGGTCAGGATTTT 59.997 47.619 16.93 0.00 0.00 1.82
5786 8349 0.611714 ACTTACGCGGGTCAGGATTT 59.388 50.000 16.93 0.00 0.00 2.17
5787 8350 0.175073 GACTTACGCGGGTCAGGATT 59.825 55.000 16.93 0.00 33.19 3.01
5788 8351 0.683504 AGACTTACGCGGGTCAGGAT 60.684 55.000 23.38 3.47 35.18 3.24
5789 8352 0.896940 AAGACTTACGCGGGTCAGGA 60.897 55.000 23.38 0.00 35.18 3.86
5790 8353 0.037605 AAAGACTTACGCGGGTCAGG 60.038 55.000 23.38 8.01 35.18 3.86
5791 8354 1.459592 CAAAAGACTTACGCGGGTCAG 59.540 52.381 23.38 10.68 35.18 3.51
5792 8355 1.504359 CAAAAGACTTACGCGGGTCA 58.496 50.000 23.38 0.00 35.18 4.02
5793 8356 0.165295 GCAAAAGACTTACGCGGGTC 59.835 55.000 12.47 15.48 0.00 4.46
5794 8357 0.533308 TGCAAAAGACTTACGCGGGT 60.533 50.000 12.47 10.91 0.00 5.28
5795 8358 0.165944 CTGCAAAAGACTTACGCGGG 59.834 55.000 12.47 0.00 0.00 6.13
5796 8359 0.865769 ACTGCAAAAGACTTACGCGG 59.134 50.000 12.47 13.46 35.08 6.46
5797 8360 2.560896 GAACTGCAAAAGACTTACGCG 58.439 47.619 3.53 3.53 0.00 6.01
5798 8361 2.033151 ACGAACTGCAAAAGACTTACGC 60.033 45.455 0.00 2.54 0.00 4.42
5799 8362 3.531982 CACGAACTGCAAAAGACTTACG 58.468 45.455 0.00 0.00 0.00 3.18
5800 8363 3.558418 TCCACGAACTGCAAAAGACTTAC 59.442 43.478 0.00 0.00 0.00 2.34
5801 8364 3.799366 TCCACGAACTGCAAAAGACTTA 58.201 40.909 0.00 0.00 0.00 2.24
5802 8365 2.639065 TCCACGAACTGCAAAAGACTT 58.361 42.857 0.00 0.00 0.00 3.01
5803 8366 2.325583 TCCACGAACTGCAAAAGACT 57.674 45.000 0.00 0.00 0.00 3.24
5804 8367 3.414549 TTTCCACGAACTGCAAAAGAC 57.585 42.857 0.00 0.00 0.00 3.01
5805 8368 4.358851 CATTTTCCACGAACTGCAAAAGA 58.641 39.130 0.00 0.00 0.00 2.52
5806 8369 3.490526 CCATTTTCCACGAACTGCAAAAG 59.509 43.478 0.00 0.00 0.00 2.27
5807 8370 3.118956 ACCATTTTCCACGAACTGCAAAA 60.119 39.130 0.00 0.00 0.00 2.44
5808 8371 2.428890 ACCATTTTCCACGAACTGCAAA 59.571 40.909 0.00 0.00 0.00 3.68
5809 8372 2.028130 ACCATTTTCCACGAACTGCAA 58.972 42.857 0.00 0.00 0.00 4.08
5810 8373 1.686355 ACCATTTTCCACGAACTGCA 58.314 45.000 0.00 0.00 0.00 4.41
5811 8374 5.510671 CATATACCATTTTCCACGAACTGC 58.489 41.667 0.00 0.00 0.00 4.40
5812 8375 5.065859 TGCATATACCATTTTCCACGAACTG 59.934 40.000 0.00 0.00 0.00 3.16
5813 8376 5.189928 TGCATATACCATTTTCCACGAACT 58.810 37.500 0.00 0.00 0.00 3.01
5814 8377 5.493133 TGCATATACCATTTTCCACGAAC 57.507 39.130 0.00 0.00 0.00 3.95
5815 8378 4.578516 CCTGCATATACCATTTTCCACGAA 59.421 41.667 0.00 0.00 0.00 3.85
5816 8379 4.133820 CCTGCATATACCATTTTCCACGA 58.866 43.478 0.00 0.00 0.00 4.35
5817 8380 3.304659 GCCTGCATATACCATTTTCCACG 60.305 47.826 0.00 0.00 0.00 4.94
5818 8381 3.005791 GGCCTGCATATACCATTTTCCAC 59.994 47.826 0.00 0.00 0.00 4.02
5819 8382 3.230134 GGCCTGCATATACCATTTTCCA 58.770 45.455 0.00 0.00 0.00 3.53
5820 8383 2.228822 CGGCCTGCATATACCATTTTCC 59.771 50.000 0.00 0.00 0.00 3.13
5821 8384 2.228822 CCGGCCTGCATATACCATTTTC 59.771 50.000 0.00 0.00 0.00 2.29
5822 8385 2.238521 CCGGCCTGCATATACCATTTT 58.761 47.619 0.00 0.00 0.00 1.82
5823 8386 1.909700 CCGGCCTGCATATACCATTT 58.090 50.000 0.00 0.00 0.00 2.32
5824 8387 0.609131 GCCGGCCTGCATATACCATT 60.609 55.000 18.11 0.00 0.00 3.16
5825 8388 1.002134 GCCGGCCTGCATATACCAT 60.002 57.895 18.11 0.00 0.00 3.55
5826 8389 2.429930 GCCGGCCTGCATATACCA 59.570 61.111 18.11 0.00 0.00 3.25
5827 8390 1.966451 GTGCCGGCCTGCATATACC 60.966 63.158 25.40 8.04 44.30 2.73
5828 8391 2.317609 CGTGCCGGCCTGCATATAC 61.318 63.158 25.40 11.87 44.30 1.47
5829 8392 2.030412 CGTGCCGGCCTGCATATA 59.970 61.111 25.40 0.00 44.30 0.86
5830 8393 4.935495 CCGTGCCGGCCTGCATAT 62.935 66.667 25.40 0.00 44.30 1.78
5842 8405 4.373116 TTCTGTCCTCGCCCGTGC 62.373 66.667 0.00 0.00 0.00 5.34
5843 8406 2.125912 CTTCTGTCCTCGCCCGTG 60.126 66.667 0.00 0.00 0.00 4.94
5844 8407 2.282958 TCTTCTGTCCTCGCCCGT 60.283 61.111 0.00 0.00 0.00 5.28
5845 8408 2.182030 GTCTTCTGTCCTCGCCCG 59.818 66.667 0.00 0.00 0.00 6.13
5846 8409 0.968393 AGAGTCTTCTGTCCTCGCCC 60.968 60.000 0.00 0.00 30.72 6.13
5847 8410 0.172352 CAGAGTCTTCTGTCCTCGCC 59.828 60.000 0.00 0.00 44.74 5.54
5848 8411 3.712020 CAGAGTCTTCTGTCCTCGC 57.288 57.895 0.00 0.00 44.74 5.03
5849 8412 3.156188 GGCCAGAGTCTTCTGTCCTCG 62.156 61.905 0.00 0.00 44.32 4.63
5850 8413 0.534873 GGCCAGAGTCTTCTGTCCTC 59.465 60.000 0.00 0.00 44.32 3.71
5851 8414 0.907230 GGGCCAGAGTCTTCTGTCCT 60.907 60.000 4.39 0.00 46.38 3.85
5852 8415 1.599576 GGGCCAGAGTCTTCTGTCC 59.400 63.158 4.39 0.32 46.44 4.02
5856 8419 0.032017 ATACGGGGCCAGAGTCTTCT 60.032 55.000 11.67 0.00 0.00 2.85
5857 8420 1.700955 TATACGGGGCCAGAGTCTTC 58.299 55.000 11.67 0.00 0.00 2.87
5858 8421 2.170012 TTATACGGGGCCAGAGTCTT 57.830 50.000 11.67 0.00 0.00 3.01
5859 8422 2.249139 GATTATACGGGGCCAGAGTCT 58.751 52.381 11.67 0.00 0.00 3.24
5860 8423 1.968493 TGATTATACGGGGCCAGAGTC 59.032 52.381 11.67 1.55 0.00 3.36
5861 8424 2.097110 TGATTATACGGGGCCAGAGT 57.903 50.000 11.67 7.25 0.00 3.24
5862 8425 2.550208 GGTTGATTATACGGGGCCAGAG 60.550 54.545 11.67 0.28 0.00 3.35
5863 8426 1.418637 GGTTGATTATACGGGGCCAGA 59.581 52.381 11.67 0.00 0.00 3.86
5864 8427 1.544759 GGGTTGATTATACGGGGCCAG 60.545 57.143 4.39 3.10 0.00 4.85
5865 8428 0.475044 GGGTTGATTATACGGGGCCA 59.525 55.000 4.39 0.00 0.00 5.36
5866 8429 0.604511 CGGGTTGATTATACGGGGCC 60.605 60.000 0.00 0.00 0.00 5.80
5867 8430 0.107268 ACGGGTTGATTATACGGGGC 59.893 55.000 0.00 0.00 0.00 5.80
5868 8431 3.749665 TTACGGGTTGATTATACGGGG 57.250 47.619 0.00 0.00 0.00 5.73
5888 8451 9.991906 TCGGTATATTCGGAGAATATTCTTTTT 57.008 29.630 18.88 6.11 45.90 1.94
5889 8452 9.991906 TTCGGTATATTCGGAGAATATTCTTTT 57.008 29.630 18.88 0.00 45.90 2.27
5890 8453 9.420551 GTTCGGTATATTCGGAGAATATTCTTT 57.579 33.333 18.88 0.00 45.90 2.52
5891 8454 8.582437 TGTTCGGTATATTCGGAGAATATTCTT 58.418 33.333 18.88 5.70 45.90 2.52
5892 8455 8.118976 TGTTCGGTATATTCGGAGAATATTCT 57.881 34.615 17.96 17.96 45.90 2.40
5893 8456 8.242053 TCTGTTCGGTATATTCGGAGAATATTC 58.758 37.037 17.16 7.41 45.90 1.75
5894 8457 8.027771 GTCTGTTCGGTATATTCGGAGAATATT 58.972 37.037 17.16 0.00 45.90 1.28
5895 8458 7.362747 GGTCTGTTCGGTATATTCGGAGAATAT 60.363 40.741 16.45 16.45 45.90 1.28
5896 8459 6.072286 GGTCTGTTCGGTATATTCGGAGAATA 60.072 42.308 5.14 5.14 45.90 1.75
5897 8460 5.278858 GGTCTGTTCGGTATATTCGGAGAAT 60.279 44.000 0.79 0.79 45.90 2.40
5898 8461 4.037208 GGTCTGTTCGGTATATTCGGAGAA 59.963 45.833 0.00 0.00 45.90 2.87
5899 8462 3.567164 GGTCTGTTCGGTATATTCGGAGA 59.433 47.826 0.00 0.00 0.00 3.71
5900 8463 3.568853 AGGTCTGTTCGGTATATTCGGAG 59.431 47.826 0.00 0.00 0.00 4.63
5901 8464 3.559069 AGGTCTGTTCGGTATATTCGGA 58.441 45.455 0.00 0.00 0.00 4.55
5902 8465 4.758674 TCTAGGTCTGTTCGGTATATTCGG 59.241 45.833 0.00 0.00 0.00 4.30
5903 8466 5.617308 GCTCTAGGTCTGTTCGGTATATTCG 60.617 48.000 0.00 0.00 0.00 3.34
5904 8467 5.474189 AGCTCTAGGTCTGTTCGGTATATTC 59.526 44.000 0.00 0.00 0.00 1.75
5905 8468 5.386924 AGCTCTAGGTCTGTTCGGTATATT 58.613 41.667 0.00 0.00 0.00 1.28
5906 8469 4.988029 AGCTCTAGGTCTGTTCGGTATAT 58.012 43.478 0.00 0.00 0.00 0.86
5907 8470 4.434545 AGCTCTAGGTCTGTTCGGTATA 57.565 45.455 0.00 0.00 0.00 1.47
5908 8471 3.300239 AGCTCTAGGTCTGTTCGGTAT 57.700 47.619 0.00 0.00 0.00 2.73
5909 8472 2.803030 AGCTCTAGGTCTGTTCGGTA 57.197 50.000 0.00 0.00 0.00 4.02
5910 8473 2.645802 CTAGCTCTAGGTCTGTTCGGT 58.354 52.381 0.00 0.00 0.00 4.69
5911 8474 1.335496 GCTAGCTCTAGGTCTGTTCGG 59.665 57.143 7.70 0.00 33.87 4.30
5912 8475 2.294074 AGCTAGCTCTAGGTCTGTTCG 58.706 52.381 12.68 0.00 39.45 3.95
5913 8476 6.399639 AAATAGCTAGCTCTAGGTCTGTTC 57.600 41.667 23.26 0.00 42.28 3.18
5914 8477 6.800072 AAAATAGCTAGCTCTAGGTCTGTT 57.200 37.500 23.26 0.00 42.28 3.16
5915 8478 6.800072 AAAAATAGCTAGCTCTAGGTCTGT 57.200 37.500 23.26 0.00 42.28 3.41
5937 8500 5.120399 TGCGAGGAAGAAGACAACTAAAAA 58.880 37.500 0.00 0.00 0.00 1.94
5938 8501 4.699637 TGCGAGGAAGAAGACAACTAAAA 58.300 39.130 0.00 0.00 0.00 1.52
5939 8502 4.330944 TGCGAGGAAGAAGACAACTAAA 57.669 40.909 0.00 0.00 0.00 1.85
5940 8503 4.537135 ATGCGAGGAAGAAGACAACTAA 57.463 40.909 0.00 0.00 0.00 2.24
5941 8504 4.537135 AATGCGAGGAAGAAGACAACTA 57.463 40.909 0.00 0.00 0.00 2.24
5942 8505 3.409026 AATGCGAGGAAGAAGACAACT 57.591 42.857 0.00 0.00 0.00 3.16
5943 8506 5.351465 TGATTAATGCGAGGAAGAAGACAAC 59.649 40.000 0.00 0.00 0.00 3.32
5944 8507 5.487433 TGATTAATGCGAGGAAGAAGACAA 58.513 37.500 0.00 0.00 0.00 3.18
5945 8508 5.084818 TGATTAATGCGAGGAAGAAGACA 57.915 39.130 0.00 0.00 0.00 3.41
5946 8509 4.509600 CCTGATTAATGCGAGGAAGAAGAC 59.490 45.833 0.00 0.00 0.00 3.01
5947 8510 4.697514 CCTGATTAATGCGAGGAAGAAGA 58.302 43.478 0.00 0.00 0.00 2.87
5948 8511 3.249559 GCCTGATTAATGCGAGGAAGAAG 59.750 47.826 8.38 0.00 0.00 2.85
5949 8512 3.206150 GCCTGATTAATGCGAGGAAGAA 58.794 45.455 8.38 0.00 0.00 2.52
5950 8513 2.838736 GCCTGATTAATGCGAGGAAGA 58.161 47.619 8.38 0.00 0.00 2.87
5958 8521 0.861837 CTCGTCCGCCTGATTAATGC 59.138 55.000 0.00 0.00 0.00 3.56
5959 8522 1.502231 CCTCGTCCGCCTGATTAATG 58.498 55.000 0.00 0.00 0.00 1.90
5960 8523 0.393077 CCCTCGTCCGCCTGATTAAT 59.607 55.000 0.00 0.00 0.00 1.40
5961 8524 0.685131 TCCCTCGTCCGCCTGATTAA 60.685 55.000 0.00 0.00 0.00 1.40
5962 8525 0.685131 TTCCCTCGTCCGCCTGATTA 60.685 55.000 0.00 0.00 0.00 1.75
5963 8526 1.550130 TTTCCCTCGTCCGCCTGATT 61.550 55.000 0.00 0.00 0.00 2.57
5964 8527 1.550130 TTTTCCCTCGTCCGCCTGAT 61.550 55.000 0.00 0.00 0.00 2.90
5965 8528 2.211410 TTTTCCCTCGTCCGCCTGA 61.211 57.895 0.00 0.00 0.00 3.86
5966 8529 2.033194 GTTTTCCCTCGTCCGCCTG 61.033 63.158 0.00 0.00 0.00 4.85
5967 8530 2.346365 GTTTTCCCTCGTCCGCCT 59.654 61.111 0.00 0.00 0.00 5.52
5968 8531 3.116531 CGTTTTCCCTCGTCCGCC 61.117 66.667 0.00 0.00 0.00 6.13
5969 8532 3.785499 GCGTTTTCCCTCGTCCGC 61.785 66.667 0.00 0.00 0.00 5.54
5970 8533 3.475774 CGCGTTTTCCCTCGTCCG 61.476 66.667 0.00 0.00 0.00 4.79
5971 8534 2.048877 TCGCGTTTTCCCTCGTCC 60.049 61.111 5.77 0.00 0.00 4.79
5972 8535 2.092882 CCTCGCGTTTTCCCTCGTC 61.093 63.158 5.77 0.00 0.00 4.20
5973 8536 2.048503 CCTCGCGTTTTCCCTCGT 60.049 61.111 5.77 0.00 0.00 4.18
5974 8537 3.488090 GCCTCGCGTTTTCCCTCG 61.488 66.667 5.77 0.00 0.00 4.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.