Multiple sequence alignment - TraesCS5D01G273200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G273200 chr5D 100.000 7353 0 0 1 7353 375986061 375993413 0.000000e+00 13579
1 TraesCS5D01G273200 chr5D 79.293 198 29 8 7144 7337 457340783 457340972 2.150000e-25 128
2 TraesCS5D01G273200 chr5B 96.747 3566 61 10 3417 6943 448888057 448891606 0.000000e+00 5891
3 TraesCS5D01G273200 chr5B 96.266 2892 64 19 541 3420 448884747 448887606 0.000000e+00 4702
4 TraesCS5D01G273200 chr5B 90.774 336 25 6 7022 7353 448891919 448892252 1.880000e-120 444
5 TraesCS5D01G273200 chr5B 91.367 139 4 4 424 557 448879022 448879157 4.530000e-42 183
6 TraesCS5D01G273200 chr5A 98.070 3212 38 5 3283 6471 477001943 477005153 0.000000e+00 5566
7 TraesCS5D01G273200 chr5A 97.820 2294 41 6 948 3238 476999659 477001946 0.000000e+00 3951
8 TraesCS5D01G273200 chr5A 96.802 344 9 2 7012 7353 477005351 477005694 2.300000e-159 573
9 TraesCS5D01G273200 chr5A 92.203 295 10 6 424 717 476922077 476922359 8.880000e-109 405
10 TraesCS5D01G273200 chr5A 81.164 292 31 10 7071 7350 693408522 693408801 5.780000e-51 213
11 TraesCS5D01G273200 chr5A 80.000 190 24 11 7160 7344 708118921 708119101 2.150000e-25 128
12 TraesCS5D01G273200 chr2A 93.146 2699 148 25 1685 4357 718460002 718462689 0.000000e+00 3925
13 TraesCS5D01G273200 chr2A 92.212 2260 109 26 4403 6639 718462838 718465053 0.000000e+00 3136
14 TraesCS5D01G273200 chr2A 87.662 924 64 19 815 1703 718458472 718459380 0.000000e+00 1029
15 TraesCS5D01G273200 chr2A 91.115 619 49 3 2175 2787 702075819 702075201 0.000000e+00 833
16 TraesCS5D01G273200 chr2A 82.667 375 41 13 6666 7026 718465050 718465414 1.990000e-80 311
17 TraesCS5D01G273200 chr2A 90.583 223 20 1 1142 1364 17370462 17370241 2.010000e-75 294
18 TraesCS5D01G273200 chr2A 78.037 214 32 8 7147 7352 71104568 71104362 3.600000e-23 121
19 TraesCS5D01G273200 chr2A 100.000 54 0 0 7024 7077 718465435 718465488 4.690000e-17 100
20 TraesCS5D01G273200 chr2D 91.597 2404 160 16 4403 6777 584273475 584275865 0.000000e+00 3282
21 TraesCS5D01G273200 chr2D 92.205 2091 126 23 2329 4403 584271294 584273363 0.000000e+00 2924
22 TraesCS5D01G273200 chr2D 93.827 648 37 3 1685 2331 584265455 584266100 0.000000e+00 972
23 TraesCS5D01G273200 chr2D 85.665 579 35 14 1163 1703 584264419 584264987 3.850000e-157 566
24 TraesCS5D01G273200 chr2D 89.199 287 23 6 6946 7228 584275956 584276238 1.170000e-92 351
25 TraesCS5D01G273200 chr2D 91.304 138 8 4 84 219 582492703 582492838 1.260000e-42 185
26 TraesCS5D01G273200 chr2D 89.873 79 7 1 1190 1268 353923900 353923977 4.690000e-17 100
27 TraesCS5D01G273200 chr2B 91.292 1447 89 28 2711 4131 703700095 703701530 0.000000e+00 1940
28 TraesCS5D01G273200 chr2B 94.206 932 45 7 5305 6235 703702650 703703573 0.000000e+00 1413
29 TraesCS5D01G273200 chr2B 89.646 792 54 11 4403 5170 703701865 703702652 0.000000e+00 983
30 TraesCS5D01G273200 chr2B 87.529 858 59 17 6183 7021 703703676 703704504 0.000000e+00 948
31 TraesCS5D01G273200 chr2B 92.558 645 45 3 1685 2328 703689281 703689923 0.000000e+00 922
32 TraesCS5D01G273200 chr2B 91.852 540 39 3 918 1454 703666171 703666708 0.000000e+00 749
33 TraesCS5D01G273200 chr2B 95.122 328 12 2 2329 2652 703699691 703700018 1.410000e-141 514
34 TraesCS5D01G273200 chr2B 91.579 190 15 1 4168 4357 703701528 703701716 2.030000e-65 261
35 TraesCS5D01G273200 chr2B 77.163 289 28 12 1446 1706 703688536 703688814 4.630000e-27 134
36 TraesCS5D01G273200 chr4A 91.761 619 45 3 2175 2787 524283134 524283752 0.000000e+00 856
37 TraesCS5D01G273200 chr1B 81.630 724 92 16 4742 5441 499543739 499544445 4.980000e-156 562
38 TraesCS5D01G273200 chr1D 84.105 497 61 6 4961 5441 374479973 374480467 1.440000e-126 464
39 TraesCS5D01G273200 chr1D 86.864 236 21 5 4735 4970 374479142 374479367 9.470000e-64 255
40 TraesCS5D01G273200 chr1D 82.699 289 36 8 7068 7353 14691805 14692082 2.050000e-60 244
41 TraesCS5D01G273200 chr1D 91.139 79 6 1 1190 1268 475432700 475432623 1.010000e-18 106
42 TraesCS5D01G273200 chr1A 83.974 156 15 4 4817 4962 474235567 474235722 2.770000e-29 141
43 TraesCS5D01G273200 chr1A 90.099 101 7 1 4727 4824 474234171 474234271 2.150000e-25 128
44 TraesCS5D01G273200 chr3D 80.319 188 23 6 7169 7352 36243852 36244029 5.990000e-26 130
45 TraesCS5D01G273200 chr7B 78.109 201 32 8 7147 7344 73480112 73480303 4.660000e-22 117
46 TraesCS5D01G273200 chr7D 87.778 90 7 4 1190 1278 54645094 54645180 1.310000e-17 102


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G273200 chr5D 375986061 375993413 7352 False 13579.000000 13579 100.000000 1 7353 1 chr5D.!!$F1 7352
1 TraesCS5D01G273200 chr5B 448884747 448892252 7505 False 3679.000000 5891 94.595667 541 7353 3 chr5B.!!$F2 6812
2 TraesCS5D01G273200 chr5A 476999659 477005694 6035 False 3363.333333 5566 97.564000 948 7353 3 chr5A.!!$F4 6405
3 TraesCS5D01G273200 chr2A 718458472 718465488 7016 False 1700.200000 3925 91.137400 815 7077 5 chr2A.!!$F1 6262
4 TraesCS5D01G273200 chr2A 702075201 702075819 618 True 833.000000 833 91.115000 2175 2787 1 chr2A.!!$R3 612
5 TraesCS5D01G273200 chr2D 584271294 584276238 4944 False 2185.666667 3282 91.000333 2329 7228 3 chr2D.!!$F4 4899
6 TraesCS5D01G273200 chr2D 584264419 584266100 1681 False 769.000000 972 89.746000 1163 2331 2 chr2D.!!$F3 1168
7 TraesCS5D01G273200 chr2B 703699691 703704504 4813 False 1009.833333 1940 91.562333 2329 7021 6 chr2B.!!$F3 4692
8 TraesCS5D01G273200 chr2B 703666171 703666708 537 False 749.000000 749 91.852000 918 1454 1 chr2B.!!$F1 536
9 TraesCS5D01G273200 chr2B 703688536 703689923 1387 False 528.000000 922 84.860500 1446 2328 2 chr2B.!!$F2 882
10 TraesCS5D01G273200 chr4A 524283134 524283752 618 False 856.000000 856 91.761000 2175 2787 1 chr4A.!!$F1 612
11 TraesCS5D01G273200 chr1B 499543739 499544445 706 False 562.000000 562 81.630000 4742 5441 1 chr1B.!!$F1 699
12 TraesCS5D01G273200 chr1D 374479142 374480467 1325 False 359.500000 464 85.484500 4735 5441 2 chr1D.!!$F2 706

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
673 674 0.034059 CTATCCATCCACTCCGGCAC 59.966 60.000 0.00 0.0 33.14 5.01 F
819 822 0.620700 AGAATAGAACGCCCACCCCT 60.621 55.000 0.00 0.0 0.00 4.79 F
1867 3049 1.078143 CAGCCCCAGTAGGAAGTGC 60.078 63.158 0.00 0.0 38.24 4.40 F
3361 4625 2.860735 GTTCGCTGACGCAGATTCTAAT 59.139 45.455 10.46 0.0 39.84 1.73 F
4610 6500 1.271871 TGCATACCTTGTGTCCTTGGG 60.272 52.381 0.00 0.0 0.00 4.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1857 3039 0.320697 AGTCCGGTTGCACTTCCTAC 59.679 55.000 0.00 0.00 0.00 3.18 R
2803 4064 2.892852 CCCTTGTGATTTGCCTGAGAAA 59.107 45.455 0.00 0.00 0.00 2.52 R
3548 5272 2.673368 GGATGAAAACTAGCTCACACCG 59.327 50.000 0.00 0.00 0.00 4.94 R
4612 6502 4.533707 TGGGCATTCTAGAATCCATAGAGG 59.466 45.833 23.77 11.35 39.47 3.69 R
6544 9254 1.329599 ACTCGTCCAGCAAAAACGTTC 59.670 47.619 0.00 0.00 37.64 3.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.279743 GGATCCATGGCTGCCCAA 59.720 61.111 17.53 0.00 46.14 4.12
18 19 1.381599 GGATCCATGGCTGCCCAAA 60.382 57.895 17.53 0.00 46.14 3.28
19 20 1.679559 GGATCCATGGCTGCCCAAAC 61.680 60.000 17.53 2.85 46.14 2.93
20 21 0.971959 GATCCATGGCTGCCCAAACA 60.972 55.000 17.53 0.00 46.14 2.83
21 22 0.974010 ATCCATGGCTGCCCAAACAG 60.974 55.000 17.53 0.00 46.14 3.16
22 23 2.652095 CCATGGCTGCCCAAACAGG 61.652 63.158 17.53 5.06 46.14 4.00
23 24 1.909781 CATGGCTGCCCAAACAGGT 60.910 57.895 17.53 0.00 46.14 4.00
24 25 1.909781 ATGGCTGCCCAAACAGGTG 60.910 57.895 17.53 0.00 46.14 4.00
25 26 2.203480 GGCTGCCCAAACAGGTGA 60.203 61.111 7.66 0.00 38.16 4.02
26 27 2.270986 GGCTGCCCAAACAGGTGAG 61.271 63.158 7.66 0.00 38.16 3.51
27 28 2.924105 GCTGCCCAAACAGGTGAGC 61.924 63.158 0.00 0.00 38.16 4.26
28 29 1.529010 CTGCCCAAACAGGTGAGCA 60.529 57.895 0.00 0.00 33.85 4.26
29 30 0.896940 CTGCCCAAACAGGTGAGCAT 60.897 55.000 0.00 0.00 32.65 3.79
30 31 1.180456 TGCCCAAACAGGTGAGCATG 61.180 55.000 0.00 0.00 34.66 4.06
31 32 1.181098 GCCCAAACAGGTGAGCATGT 61.181 55.000 0.00 0.00 41.83 3.21
32 33 1.886222 GCCCAAACAGGTGAGCATGTA 60.886 52.381 0.00 0.00 38.83 2.29
33 34 2.726821 CCCAAACAGGTGAGCATGTAT 58.273 47.619 0.00 0.00 38.83 2.29
34 35 3.091545 CCCAAACAGGTGAGCATGTATT 58.908 45.455 0.00 0.00 38.83 1.89
35 36 3.511146 CCCAAACAGGTGAGCATGTATTT 59.489 43.478 0.00 0.00 38.83 1.40
36 37 4.021192 CCCAAACAGGTGAGCATGTATTTT 60.021 41.667 0.00 0.00 38.83 1.82
37 38 5.511202 CCCAAACAGGTGAGCATGTATTTTT 60.511 40.000 0.00 0.00 38.83 1.94
38 39 5.406175 CCAAACAGGTGAGCATGTATTTTTG 59.594 40.000 0.00 0.00 38.83 2.44
39 40 4.789012 ACAGGTGAGCATGTATTTTTGG 57.211 40.909 0.00 0.00 37.91 3.28
40 41 3.056607 ACAGGTGAGCATGTATTTTTGGC 60.057 43.478 0.00 0.00 37.91 4.52
41 42 3.056678 CAGGTGAGCATGTATTTTTGGCA 60.057 43.478 0.00 0.00 0.00 4.92
42 43 3.194116 AGGTGAGCATGTATTTTTGGCAG 59.806 43.478 0.00 0.00 0.00 4.85
43 44 3.056607 GGTGAGCATGTATTTTTGGCAGT 60.057 43.478 0.00 0.00 0.00 4.40
44 45 4.168760 GTGAGCATGTATTTTTGGCAGTC 58.831 43.478 0.00 0.00 0.00 3.51
45 46 4.081406 TGAGCATGTATTTTTGGCAGTCT 58.919 39.130 0.00 0.00 0.00 3.24
46 47 4.523943 TGAGCATGTATTTTTGGCAGTCTT 59.476 37.500 0.00 0.00 0.00 3.01
47 48 5.709631 TGAGCATGTATTTTTGGCAGTCTTA 59.290 36.000 0.00 0.00 0.00 2.10
48 49 5.954335 AGCATGTATTTTTGGCAGTCTTAC 58.046 37.500 0.00 0.00 0.00 2.34
49 50 5.102313 GCATGTATTTTTGGCAGTCTTACC 58.898 41.667 0.00 0.00 0.00 2.85
50 51 5.336372 GCATGTATTTTTGGCAGTCTTACCA 60.336 40.000 0.00 0.00 0.00 3.25
51 52 6.686630 CATGTATTTTTGGCAGTCTTACCAA 58.313 36.000 0.68 0.68 44.11 3.67
52 53 6.325919 TGTATTTTTGGCAGTCTTACCAAG 57.674 37.500 4.65 0.00 46.20 3.61
53 54 5.830991 TGTATTTTTGGCAGTCTTACCAAGT 59.169 36.000 4.65 0.24 46.20 3.16
54 55 5.869649 ATTTTTGGCAGTCTTACCAAGTT 57.130 34.783 4.65 0.00 46.20 2.66
55 56 5.669164 TTTTTGGCAGTCTTACCAAGTTT 57.331 34.783 4.65 0.00 46.20 2.66
56 57 4.911514 TTTGGCAGTCTTACCAAGTTTC 57.088 40.909 4.65 0.00 46.20 2.78
57 58 3.569194 TGGCAGTCTTACCAAGTTTCA 57.431 42.857 0.00 0.00 31.46 2.69
58 59 3.892284 TGGCAGTCTTACCAAGTTTCAA 58.108 40.909 0.00 0.00 31.46 2.69
59 60 4.274147 TGGCAGTCTTACCAAGTTTCAAA 58.726 39.130 0.00 0.00 31.46 2.69
60 61 4.892934 TGGCAGTCTTACCAAGTTTCAAAT 59.107 37.500 0.00 0.00 31.46 2.32
61 62 5.362430 TGGCAGTCTTACCAAGTTTCAAATT 59.638 36.000 0.00 0.00 31.46 1.82
62 63 6.547880 TGGCAGTCTTACCAAGTTTCAAATTA 59.452 34.615 0.00 0.00 31.46 1.40
63 64 7.068839 TGGCAGTCTTACCAAGTTTCAAATTAA 59.931 33.333 0.00 0.00 31.46 1.40
64 65 7.381408 GGCAGTCTTACCAAGTTTCAAATTAAC 59.619 37.037 0.00 0.00 0.00 2.01
65 66 8.135529 GCAGTCTTACCAAGTTTCAAATTAACT 58.864 33.333 0.00 0.00 37.43 2.24
66 67 9.450807 CAGTCTTACCAAGTTTCAAATTAACTG 57.549 33.333 0.00 0.00 36.06 3.16
67 68 9.403583 AGTCTTACCAAGTTTCAAATTAACTGA 57.596 29.630 0.00 0.00 36.06 3.41
85 86 8.767478 TTAACTGATAAGTAAGTACCAGTTGC 57.233 34.615 15.69 0.00 42.56 4.17
86 87 5.731591 ACTGATAAGTAAGTACCAGTTGCC 58.268 41.667 0.00 0.00 31.62 4.52
87 88 5.484290 ACTGATAAGTAAGTACCAGTTGCCT 59.516 40.000 0.00 0.00 31.62 4.75
88 89 6.013639 ACTGATAAGTAAGTACCAGTTGCCTT 60.014 38.462 0.00 0.00 31.62 4.35
89 90 6.775708 TGATAAGTAAGTACCAGTTGCCTTT 58.224 36.000 0.00 0.00 0.00 3.11
90 91 6.653320 TGATAAGTAAGTACCAGTTGCCTTTG 59.347 38.462 0.00 0.00 0.00 2.77
91 92 3.146847 AGTAAGTACCAGTTGCCTTTGC 58.853 45.455 0.00 0.00 38.26 3.68
115 116 6.959361 CATGTATAAATGCTTGTCTGTACCC 58.041 40.000 0.00 0.00 0.00 3.69
116 117 6.056090 TGTATAAATGCTTGTCTGTACCCA 57.944 37.500 0.00 0.00 0.00 4.51
117 118 6.477253 TGTATAAATGCTTGTCTGTACCCAA 58.523 36.000 0.00 0.00 0.00 4.12
118 119 6.943146 TGTATAAATGCTTGTCTGTACCCAAA 59.057 34.615 0.00 0.00 0.00 3.28
119 120 4.853924 AAATGCTTGTCTGTACCCAAAG 57.146 40.909 0.00 0.00 0.00 2.77
120 121 1.604604 TGCTTGTCTGTACCCAAAGC 58.395 50.000 10.89 10.89 0.00 3.51
121 122 1.133945 TGCTTGTCTGTACCCAAAGCA 60.134 47.619 14.64 14.64 0.00 3.91
122 123 1.266989 GCTTGTCTGTACCCAAAGCAC 59.733 52.381 12.25 0.00 0.00 4.40
123 124 1.880027 CTTGTCTGTACCCAAAGCACC 59.120 52.381 0.00 0.00 0.00 5.01
124 125 1.136828 TGTCTGTACCCAAAGCACCT 58.863 50.000 0.00 0.00 0.00 4.00
125 126 1.202758 TGTCTGTACCCAAAGCACCTG 60.203 52.381 0.00 0.00 0.00 4.00
126 127 0.250727 TCTGTACCCAAAGCACCTGC 60.251 55.000 0.00 0.00 42.49 4.85
136 137 4.844420 GCACCTGCTTCTATCGCT 57.156 55.556 0.00 0.00 38.21 4.93
137 138 3.071580 GCACCTGCTTCTATCGCTT 57.928 52.632 0.00 0.00 38.21 4.68
138 139 2.225068 GCACCTGCTTCTATCGCTTA 57.775 50.000 0.00 0.00 38.21 3.09
139 140 2.550978 GCACCTGCTTCTATCGCTTAA 58.449 47.619 0.00 0.00 38.21 1.85
140 141 2.936498 GCACCTGCTTCTATCGCTTAAA 59.064 45.455 0.00 0.00 38.21 1.52
141 142 3.374058 GCACCTGCTTCTATCGCTTAAAA 59.626 43.478 0.00 0.00 38.21 1.52
142 143 4.035675 GCACCTGCTTCTATCGCTTAAAAT 59.964 41.667 0.00 0.00 38.21 1.82
143 144 5.449177 GCACCTGCTTCTATCGCTTAAAATT 60.449 40.000 0.00 0.00 38.21 1.82
144 145 5.967674 CACCTGCTTCTATCGCTTAAAATTG 59.032 40.000 0.00 0.00 0.00 2.32
145 146 4.972440 CCTGCTTCTATCGCTTAAAATTGC 59.028 41.667 0.00 0.00 0.00 3.56
146 147 5.449041 CCTGCTTCTATCGCTTAAAATTGCA 60.449 40.000 0.00 0.00 0.00 4.08
147 148 5.331902 TGCTTCTATCGCTTAAAATTGCAC 58.668 37.500 0.00 0.00 0.00 4.57
148 149 4.735338 GCTTCTATCGCTTAAAATTGCACC 59.265 41.667 0.00 0.00 0.00 5.01
149 150 4.530094 TCTATCGCTTAAAATTGCACCG 57.470 40.909 0.00 0.00 0.00 4.94
150 151 4.185394 TCTATCGCTTAAAATTGCACCGA 58.815 39.130 0.00 0.00 0.00 4.69
151 152 2.604969 TCGCTTAAAATTGCACCGAC 57.395 45.000 0.00 0.00 0.00 4.79
152 153 1.874231 TCGCTTAAAATTGCACCGACA 59.126 42.857 0.00 0.00 0.00 4.35
153 154 2.095969 TCGCTTAAAATTGCACCGACAG 60.096 45.455 0.00 0.00 0.00 3.51
154 155 2.350388 CGCTTAAAATTGCACCGACAGT 60.350 45.455 0.00 0.00 0.00 3.55
155 156 3.234386 GCTTAAAATTGCACCGACAGTC 58.766 45.455 0.00 0.00 0.00 3.51
156 157 3.821841 CTTAAAATTGCACCGACAGTCC 58.178 45.455 0.00 0.00 0.00 3.85
157 158 1.686355 AAAATTGCACCGACAGTCCA 58.314 45.000 0.00 0.00 0.00 4.02
158 159 1.909700 AAATTGCACCGACAGTCCAT 58.090 45.000 0.00 0.00 0.00 3.41
159 160 1.453155 AATTGCACCGACAGTCCATC 58.547 50.000 0.00 0.00 0.00 3.51
160 161 0.324614 ATTGCACCGACAGTCCATCA 59.675 50.000 0.00 0.00 0.00 3.07
161 162 0.107643 TTGCACCGACAGTCCATCAA 59.892 50.000 0.00 0.00 0.00 2.57
162 163 0.320683 TGCACCGACAGTCCATCAAG 60.321 55.000 0.00 0.00 0.00 3.02
163 164 1.021390 GCACCGACAGTCCATCAAGG 61.021 60.000 0.00 0.00 39.47 3.61
164 165 0.321671 CACCGACAGTCCATCAAGGT 59.678 55.000 0.00 0.00 39.02 3.50
165 166 1.548719 CACCGACAGTCCATCAAGGTA 59.451 52.381 0.00 0.00 39.02 3.08
166 167 1.825474 ACCGACAGTCCATCAAGGTAG 59.175 52.381 0.00 0.00 39.02 3.18
167 168 2.100197 CCGACAGTCCATCAAGGTAGA 58.900 52.381 0.00 0.00 39.02 2.59
168 169 2.496070 CCGACAGTCCATCAAGGTAGAA 59.504 50.000 0.00 0.00 39.02 2.10
169 170 3.429547 CCGACAGTCCATCAAGGTAGAAG 60.430 52.174 0.00 0.00 39.02 2.85
170 171 3.429547 CGACAGTCCATCAAGGTAGAAGG 60.430 52.174 0.00 0.00 39.02 3.46
171 172 2.237392 ACAGTCCATCAAGGTAGAAGGC 59.763 50.000 0.00 0.00 39.02 4.35
172 173 1.840635 AGTCCATCAAGGTAGAAGGCC 59.159 52.381 0.00 0.00 39.02 5.19
173 174 1.559682 GTCCATCAAGGTAGAAGGCCA 59.440 52.381 5.01 0.00 39.02 5.36
174 175 2.026262 GTCCATCAAGGTAGAAGGCCAA 60.026 50.000 5.01 0.00 39.02 4.52
175 176 2.647299 TCCATCAAGGTAGAAGGCCAAA 59.353 45.455 5.01 0.00 39.02 3.28
176 177 2.755103 CCATCAAGGTAGAAGGCCAAAC 59.245 50.000 5.01 0.00 0.00 2.93
177 178 3.420893 CATCAAGGTAGAAGGCCAAACA 58.579 45.455 5.01 0.00 0.00 2.83
178 179 3.586470 TCAAGGTAGAAGGCCAAACAA 57.414 42.857 5.01 0.00 0.00 2.83
179 180 3.904717 TCAAGGTAGAAGGCCAAACAAA 58.095 40.909 5.01 0.00 0.00 2.83
180 181 4.479158 TCAAGGTAGAAGGCCAAACAAAT 58.521 39.130 5.01 0.00 0.00 2.32
181 182 4.522789 TCAAGGTAGAAGGCCAAACAAATC 59.477 41.667 5.01 0.00 0.00 2.17
182 183 4.112634 AGGTAGAAGGCCAAACAAATCA 57.887 40.909 5.01 0.00 0.00 2.57
183 184 4.479158 AGGTAGAAGGCCAAACAAATCAA 58.521 39.130 5.01 0.00 0.00 2.57
184 185 4.898861 AGGTAGAAGGCCAAACAAATCAAA 59.101 37.500 5.01 0.00 0.00 2.69
185 186 5.543790 AGGTAGAAGGCCAAACAAATCAAAT 59.456 36.000 5.01 0.00 0.00 2.32
186 187 6.043127 AGGTAGAAGGCCAAACAAATCAAATT 59.957 34.615 5.01 0.00 0.00 1.82
187 188 6.710295 GGTAGAAGGCCAAACAAATCAAATTT 59.290 34.615 5.01 0.00 0.00 1.82
188 189 7.228507 GGTAGAAGGCCAAACAAATCAAATTTT 59.771 33.333 5.01 0.00 0.00 1.82
189 190 7.263100 AGAAGGCCAAACAAATCAAATTTTC 57.737 32.000 5.01 0.00 0.00 2.29
190 191 6.827762 AGAAGGCCAAACAAATCAAATTTTCA 59.172 30.769 5.01 0.00 0.00 2.69
191 192 7.503230 AGAAGGCCAAACAAATCAAATTTTCAT 59.497 29.630 5.01 0.00 0.00 2.57
192 193 7.205737 AGGCCAAACAAATCAAATTTTCATC 57.794 32.000 5.01 0.00 0.00 2.92
193 194 6.073112 AGGCCAAACAAATCAAATTTTCATCG 60.073 34.615 5.01 0.00 0.00 3.84
194 195 6.293353 GGCCAAACAAATCAAATTTTCATCGT 60.293 34.615 0.00 0.00 0.00 3.73
195 196 7.131565 GCCAAACAAATCAAATTTTCATCGTT 58.868 30.769 0.00 0.00 0.00 3.85
196 197 7.321034 GCCAAACAAATCAAATTTTCATCGTTC 59.679 33.333 0.00 0.00 0.00 3.95
197 198 7.798052 CCAAACAAATCAAATTTTCATCGTTCC 59.202 33.333 0.00 0.00 0.00 3.62
198 199 7.420184 AACAAATCAAATTTTCATCGTTCCC 57.580 32.000 0.00 0.00 0.00 3.97
199 200 6.520272 ACAAATCAAATTTTCATCGTTCCCA 58.480 32.000 0.00 0.00 0.00 4.37
200 201 6.989169 ACAAATCAAATTTTCATCGTTCCCAA 59.011 30.769 0.00 0.00 0.00 4.12
201 202 7.661027 ACAAATCAAATTTTCATCGTTCCCAAT 59.339 29.630 0.00 0.00 0.00 3.16
202 203 8.505625 CAAATCAAATTTTCATCGTTCCCAATT 58.494 29.630 0.00 0.00 0.00 2.32
203 204 7.832503 ATCAAATTTTCATCGTTCCCAATTC 57.167 32.000 0.00 0.00 0.00 2.17
204 205 6.991938 TCAAATTTTCATCGTTCCCAATTCT 58.008 32.000 0.00 0.00 0.00 2.40
205 206 7.090173 TCAAATTTTCATCGTTCCCAATTCTC 58.910 34.615 0.00 0.00 0.00 2.87
206 207 6.588719 AATTTTCATCGTTCCCAATTCTCA 57.411 33.333 0.00 0.00 0.00 3.27
207 208 5.371115 TTTTCATCGTTCCCAATTCTCAC 57.629 39.130 0.00 0.00 0.00 3.51
208 209 3.981071 TCATCGTTCCCAATTCTCACT 57.019 42.857 0.00 0.00 0.00 3.41
209 210 3.599343 TCATCGTTCCCAATTCTCACTG 58.401 45.455 0.00 0.00 0.00 3.66
210 211 2.472695 TCGTTCCCAATTCTCACTGG 57.527 50.000 0.00 0.00 0.00 4.00
211 212 1.697432 TCGTTCCCAATTCTCACTGGT 59.303 47.619 0.00 0.00 0.00 4.00
212 213 2.105821 TCGTTCCCAATTCTCACTGGTT 59.894 45.455 0.00 0.00 0.00 3.67
213 214 2.884639 CGTTCCCAATTCTCACTGGTTT 59.115 45.455 0.00 0.00 0.00 3.27
214 215 4.069304 CGTTCCCAATTCTCACTGGTTTA 58.931 43.478 0.00 0.00 0.00 2.01
215 216 4.700213 CGTTCCCAATTCTCACTGGTTTAT 59.300 41.667 0.00 0.00 0.00 1.40
216 217 5.391950 CGTTCCCAATTCTCACTGGTTTATG 60.392 44.000 0.00 0.00 0.00 1.90
217 218 5.512942 TCCCAATTCTCACTGGTTTATGA 57.487 39.130 0.00 0.00 0.00 2.15
218 219 6.078456 TCCCAATTCTCACTGGTTTATGAT 57.922 37.500 0.00 0.00 0.00 2.45
219 220 6.493166 TCCCAATTCTCACTGGTTTATGATT 58.507 36.000 0.00 0.00 0.00 2.57
220 221 6.377996 TCCCAATTCTCACTGGTTTATGATTG 59.622 38.462 0.00 0.00 0.00 2.67
221 222 6.153340 CCCAATTCTCACTGGTTTATGATTGT 59.847 38.462 0.00 0.00 0.00 2.71
222 223 7.339212 CCCAATTCTCACTGGTTTATGATTGTA 59.661 37.037 0.00 0.00 0.00 2.41
223 224 8.184192 CCAATTCTCACTGGTTTATGATTGTAC 58.816 37.037 0.00 0.00 0.00 2.90
224 225 8.950210 CAATTCTCACTGGTTTATGATTGTACT 58.050 33.333 0.00 0.00 0.00 2.73
225 226 9.520515 AATTCTCACTGGTTTATGATTGTACTT 57.479 29.630 0.00 0.00 0.00 2.24
226 227 7.905604 TCTCACTGGTTTATGATTGTACTTG 57.094 36.000 0.00 0.00 0.00 3.16
227 228 6.371548 TCTCACTGGTTTATGATTGTACTTGC 59.628 38.462 0.00 0.00 0.00 4.01
228 229 6.237901 TCACTGGTTTATGATTGTACTTGCT 58.762 36.000 0.00 0.00 0.00 3.91
229 230 7.390823 TCACTGGTTTATGATTGTACTTGCTA 58.609 34.615 0.00 0.00 0.00 3.49
230 231 7.880713 TCACTGGTTTATGATTGTACTTGCTAA 59.119 33.333 0.00 0.00 0.00 3.09
231 232 8.677300 CACTGGTTTATGATTGTACTTGCTAAT 58.323 33.333 0.00 0.00 0.00 1.73
232 233 8.677300 ACTGGTTTATGATTGTACTTGCTAATG 58.323 33.333 0.00 0.00 0.00 1.90
233 234 8.574251 TGGTTTATGATTGTACTTGCTAATGT 57.426 30.769 0.00 0.00 0.00 2.71
234 235 8.673711 TGGTTTATGATTGTACTTGCTAATGTC 58.326 33.333 0.00 0.00 0.00 3.06
235 236 8.893727 GGTTTATGATTGTACTTGCTAATGTCT 58.106 33.333 0.00 0.00 0.00 3.41
240 241 9.836864 ATGATTGTACTTGCTAATGTCTAATCA 57.163 29.630 0.00 0.00 35.36 2.57
241 242 9.098355 TGATTGTACTTGCTAATGTCTAATCAC 57.902 33.333 0.00 0.00 30.79 3.06
242 243 9.098355 GATTGTACTTGCTAATGTCTAATCACA 57.902 33.333 0.00 0.00 0.00 3.58
243 244 9.618890 ATTGTACTTGCTAATGTCTAATCACAT 57.381 29.630 0.00 0.00 38.74 3.21
244 245 8.424274 TGTACTTGCTAATGTCTAATCACATG 57.576 34.615 0.00 0.00 37.07 3.21
245 246 8.257306 TGTACTTGCTAATGTCTAATCACATGA 58.743 33.333 0.00 0.00 37.07 3.07
246 247 9.265901 GTACTTGCTAATGTCTAATCACATGAT 57.734 33.333 0.00 0.00 37.07 2.45
247 248 8.151141 ACTTGCTAATGTCTAATCACATGATG 57.849 34.615 0.00 0.00 37.07 3.07
248 249 7.989170 ACTTGCTAATGTCTAATCACATGATGA 59.011 33.333 0.00 0.00 43.13 2.92
249 250 8.735692 TTGCTAATGTCTAATCACATGATGAA 57.264 30.769 0.00 0.00 41.93 2.57
250 251 8.913487 TGCTAATGTCTAATCACATGATGAAT 57.087 30.769 0.00 0.00 41.93 2.57
251 252 9.346005 TGCTAATGTCTAATCACATGATGAATT 57.654 29.630 0.00 1.41 41.93 2.17
257 258 9.398538 TGTCTAATCACATGATGAATTTGATGA 57.601 29.630 0.00 0.00 41.93 2.92
265 266 9.113876 CACATGATGAATTTGATGATGTTATCG 57.886 33.333 0.00 0.00 26.62 2.92
266 267 8.843262 ACATGATGAATTTGATGATGTTATCGT 58.157 29.630 0.00 0.00 24.50 3.73
267 268 9.113876 CATGATGAATTTGATGATGTTATCGTG 57.886 33.333 0.00 0.00 0.00 4.35
268 269 8.212317 TGATGAATTTGATGATGTTATCGTGT 57.788 30.769 0.00 0.00 0.00 4.49
269 270 8.337532 TGATGAATTTGATGATGTTATCGTGTC 58.662 33.333 0.00 0.00 0.00 3.67
270 271 7.015226 TGAATTTGATGATGTTATCGTGTCC 57.985 36.000 0.00 0.00 0.00 4.02
271 272 6.597280 TGAATTTGATGATGTTATCGTGTCCA 59.403 34.615 0.00 0.00 0.00 4.02
272 273 7.120432 TGAATTTGATGATGTTATCGTGTCCAA 59.880 33.333 0.00 0.00 0.00 3.53
273 274 7.572523 ATTTGATGATGTTATCGTGTCCAAT 57.427 32.000 0.00 0.00 0.00 3.16
274 275 7.389803 TTTGATGATGTTATCGTGTCCAATT 57.610 32.000 0.00 0.00 0.00 2.32
275 276 7.389803 TTGATGATGTTATCGTGTCCAATTT 57.610 32.000 0.00 0.00 0.00 1.82
276 277 8.499403 TTGATGATGTTATCGTGTCCAATTTA 57.501 30.769 0.00 0.00 0.00 1.40
277 278 8.499403 TGATGATGTTATCGTGTCCAATTTAA 57.501 30.769 0.00 0.00 0.00 1.52
278 279 8.611757 TGATGATGTTATCGTGTCCAATTTAAG 58.388 33.333 0.00 0.00 0.00 1.85
279 280 6.781138 TGATGTTATCGTGTCCAATTTAAGC 58.219 36.000 0.00 0.00 0.00 3.09
280 281 5.211266 TGTTATCGTGTCCAATTTAAGCG 57.789 39.130 0.00 0.00 0.00 4.68
281 282 4.691685 TGTTATCGTGTCCAATTTAAGCGT 59.308 37.500 0.00 0.00 0.00 5.07
282 283 5.868258 TGTTATCGTGTCCAATTTAAGCGTA 59.132 36.000 0.00 0.00 0.00 4.42
283 284 4.852609 ATCGTGTCCAATTTAAGCGTAC 57.147 40.909 0.00 0.00 0.00 3.67
284 285 3.651206 TCGTGTCCAATTTAAGCGTACA 58.349 40.909 0.00 0.00 0.00 2.90
285 286 4.247258 TCGTGTCCAATTTAAGCGTACAT 58.753 39.130 0.00 0.00 0.00 2.29
286 287 5.409211 TCGTGTCCAATTTAAGCGTACATA 58.591 37.500 0.00 0.00 0.00 2.29
287 288 6.044046 TCGTGTCCAATTTAAGCGTACATAT 58.956 36.000 0.00 0.00 0.00 1.78
288 289 6.019398 TCGTGTCCAATTTAAGCGTACATATG 60.019 38.462 0.00 0.00 0.00 1.78
289 290 5.907391 GTGTCCAATTTAAGCGTACATATGC 59.093 40.000 1.58 0.00 38.47 3.14
290 291 5.586643 TGTCCAATTTAAGCGTACATATGCA 59.413 36.000 1.58 0.00 40.60 3.96
291 292 6.262049 TGTCCAATTTAAGCGTACATATGCAT 59.738 34.615 3.79 3.79 40.60 3.96
292 293 7.138736 GTCCAATTTAAGCGTACATATGCATT 58.861 34.615 3.54 0.00 40.60 3.56
293 294 8.286800 GTCCAATTTAAGCGTACATATGCATTA 58.713 33.333 3.54 0.00 40.60 1.90
294 295 8.286800 TCCAATTTAAGCGTACATATGCATTAC 58.713 33.333 3.54 0.08 40.60 1.89
295 296 8.073167 CCAATTTAAGCGTACATATGCATTACA 58.927 33.333 3.54 0.00 40.60 2.41
296 297 8.891928 CAATTTAAGCGTACATATGCATTACAC 58.108 33.333 3.54 0.00 40.60 2.90
297 298 4.708868 AAGCGTACATATGCATTACACG 57.291 40.909 3.54 11.12 40.60 4.49
298 299 3.713288 AGCGTACATATGCATTACACGT 58.287 40.909 3.54 0.00 40.60 4.49
299 300 3.734231 AGCGTACATATGCATTACACGTC 59.266 43.478 3.54 6.78 40.60 4.34
300 301 3.734231 GCGTACATATGCATTACACGTCT 59.266 43.478 3.54 0.00 38.10 4.18
301 302 4.208460 GCGTACATATGCATTACACGTCTT 59.792 41.667 3.54 0.00 38.10 3.01
302 303 5.276678 GCGTACATATGCATTACACGTCTTT 60.277 40.000 3.54 0.00 38.10 2.52
303 304 6.344800 CGTACATATGCATTACACGTCTTTC 58.655 40.000 3.54 0.00 0.00 2.62
304 305 6.020201 CGTACATATGCATTACACGTCTTTCA 60.020 38.462 3.54 0.00 0.00 2.69
305 306 6.106877 ACATATGCATTACACGTCTTTCAC 57.893 37.500 3.54 0.00 0.00 3.18
319 320 6.021055 CGTCTTTCACGTTGTAGGAATATG 57.979 41.667 0.00 0.00 44.07 1.78
320 321 5.500290 CGTCTTTCACGTTGTAGGAATATGC 60.500 44.000 0.00 0.00 44.07 3.14
321 322 5.350365 GTCTTTCACGTTGTAGGAATATGCA 59.650 40.000 0.00 0.00 0.00 3.96
322 323 6.037172 GTCTTTCACGTTGTAGGAATATGCAT 59.963 38.462 3.79 3.79 0.00 3.96
323 324 7.223971 GTCTTTCACGTTGTAGGAATATGCATA 59.776 37.037 9.27 9.27 0.00 3.14
324 325 7.931407 TCTTTCACGTTGTAGGAATATGCATAT 59.069 33.333 13.63 13.63 0.00 1.78
325 326 9.203421 CTTTCACGTTGTAGGAATATGCATATA 57.797 33.333 19.39 1.11 0.00 0.86
326 327 8.528917 TTCACGTTGTAGGAATATGCATATAC 57.471 34.615 19.39 13.82 0.00 1.47
327 328 7.662897 TCACGTTGTAGGAATATGCATATACA 58.337 34.615 19.39 16.10 0.00 2.29
328 329 8.145122 TCACGTTGTAGGAATATGCATATACAA 58.855 33.333 21.03 21.03 0.00 2.41
329 330 8.769891 CACGTTGTAGGAATATGCATATACAAA 58.230 33.333 24.31 12.61 0.00 2.83
330 331 9.502091 ACGTTGTAGGAATATGCATATACAAAT 57.498 29.630 24.31 16.83 0.00 2.32
341 342 9.844790 ATATGCATATACAAATTCACATTTCGG 57.155 29.630 17.72 0.00 29.41 4.30
342 343 7.094508 TGCATATACAAATTCACATTTCGGT 57.905 32.000 0.00 0.00 29.41 4.69
343 344 7.542890 TGCATATACAAATTCACATTTCGGTT 58.457 30.769 0.00 0.00 29.41 4.44
344 345 7.700234 TGCATATACAAATTCACATTTCGGTTC 59.300 33.333 0.00 0.00 29.41 3.62
345 346 7.915397 GCATATACAAATTCACATTTCGGTTCT 59.085 33.333 0.00 0.00 29.41 3.01
346 347 9.225201 CATATACAAATTCACATTTCGGTTCTG 57.775 33.333 0.00 0.00 29.41 3.02
347 348 5.514274 ACAAATTCACATTTCGGTTCTGT 57.486 34.783 0.00 0.00 29.41 3.41
348 349 5.901552 ACAAATTCACATTTCGGTTCTGTT 58.098 33.333 0.00 0.00 29.41 3.16
349 350 7.033530 ACAAATTCACATTTCGGTTCTGTTA 57.966 32.000 0.00 0.00 29.41 2.41
350 351 7.484975 ACAAATTCACATTTCGGTTCTGTTAA 58.515 30.769 0.00 0.00 29.41 2.01
351 352 7.976734 ACAAATTCACATTTCGGTTCTGTTAAA 59.023 29.630 0.00 0.00 29.41 1.52
352 353 8.977505 CAAATTCACATTTCGGTTCTGTTAAAT 58.022 29.630 0.00 0.00 29.41 1.40
354 355 9.620660 AATTCACATTTCGGTTCTGTTAAATAC 57.379 29.630 0.00 0.00 0.00 1.89
355 356 7.731882 TCACATTTCGGTTCTGTTAAATACA 57.268 32.000 0.00 0.00 34.95 2.29
356 357 7.577979 TCACATTTCGGTTCTGTTAAATACAC 58.422 34.615 0.00 0.00 32.10 2.90
357 358 7.442969 TCACATTTCGGTTCTGTTAAATACACT 59.557 33.333 0.00 0.00 32.10 3.55
358 359 8.714179 CACATTTCGGTTCTGTTAAATACACTA 58.286 33.333 0.00 0.00 32.10 2.74
359 360 8.932791 ACATTTCGGTTCTGTTAAATACACTAG 58.067 33.333 0.00 0.00 32.10 2.57
360 361 7.894376 TTTCGGTTCTGTTAAATACACTAGG 57.106 36.000 0.00 0.00 32.10 3.02
361 362 6.594788 TCGGTTCTGTTAAATACACTAGGT 57.405 37.500 0.00 0.00 32.10 3.08
362 363 6.624423 TCGGTTCTGTTAAATACACTAGGTC 58.376 40.000 0.00 0.00 32.10 3.85
363 364 5.514204 CGGTTCTGTTAAATACACTAGGTCG 59.486 44.000 0.00 0.00 32.10 4.79
364 365 5.290400 GGTTCTGTTAAATACACTAGGTCGC 59.710 44.000 0.00 0.00 32.10 5.19
365 366 5.648178 TCTGTTAAATACACTAGGTCGCA 57.352 39.130 0.00 0.00 32.10 5.10
366 367 6.216801 TCTGTTAAATACACTAGGTCGCAT 57.783 37.500 0.00 0.00 32.10 4.73
367 368 7.337480 TCTGTTAAATACACTAGGTCGCATA 57.663 36.000 0.00 0.00 32.10 3.14
368 369 7.198390 TCTGTTAAATACACTAGGTCGCATAC 58.802 38.462 0.00 0.00 32.10 2.39
369 370 6.420008 CTGTTAAATACACTAGGTCGCATACC 59.580 42.308 0.00 0.00 39.52 2.73
370 371 7.683704 CTGTTAAATACACTAGGTCGCATACCT 60.684 40.741 12.14 12.14 45.83 3.08
377 378 2.311294 GGTCGCATACCTGTGATGC 58.689 57.895 0.00 0.00 45.75 3.91
378 379 0.179073 GGTCGCATACCTGTGATGCT 60.179 55.000 6.10 0.00 46.16 3.79
379 380 1.212616 GTCGCATACCTGTGATGCTC 58.787 55.000 6.10 0.00 46.16 4.26
380 381 0.823460 TCGCATACCTGTGATGCTCA 59.177 50.000 6.10 0.00 46.16 4.26
381 382 1.206849 TCGCATACCTGTGATGCTCAA 59.793 47.619 6.10 0.00 46.16 3.02
382 383 1.328680 CGCATACCTGTGATGCTCAAC 59.671 52.381 6.10 0.00 46.16 3.18
383 384 2.358957 GCATACCTGTGATGCTCAACA 58.641 47.619 0.42 0.00 45.14 3.33
384 385 2.749076 GCATACCTGTGATGCTCAACAA 59.251 45.455 0.42 0.00 45.14 2.83
385 386 3.191162 GCATACCTGTGATGCTCAACAAA 59.809 43.478 0.42 0.00 45.14 2.83
386 387 4.142315 GCATACCTGTGATGCTCAACAAAT 60.142 41.667 0.42 0.00 45.14 2.32
387 388 5.575957 CATACCTGTGATGCTCAACAAATC 58.424 41.667 0.00 0.00 0.00 2.17
388 389 3.759581 ACCTGTGATGCTCAACAAATCT 58.240 40.909 0.00 0.00 0.00 2.40
389 390 4.910195 ACCTGTGATGCTCAACAAATCTA 58.090 39.130 0.00 0.00 0.00 1.98
390 391 5.503927 ACCTGTGATGCTCAACAAATCTAT 58.496 37.500 0.00 0.00 0.00 1.98
391 392 6.653020 ACCTGTGATGCTCAACAAATCTATA 58.347 36.000 0.00 0.00 0.00 1.31
392 393 7.112122 ACCTGTGATGCTCAACAAATCTATAA 58.888 34.615 0.00 0.00 0.00 0.98
393 394 7.776969 ACCTGTGATGCTCAACAAATCTATAAT 59.223 33.333 0.00 0.00 0.00 1.28
394 395 8.074370 CCTGTGATGCTCAACAAATCTATAATG 58.926 37.037 0.00 0.00 0.00 1.90
395 396 8.510243 TGTGATGCTCAACAAATCTATAATGT 57.490 30.769 0.00 0.00 0.00 2.71
396 397 8.615211 TGTGATGCTCAACAAATCTATAATGTC 58.385 33.333 0.00 0.00 0.00 3.06
397 398 8.615211 GTGATGCTCAACAAATCTATAATGTCA 58.385 33.333 0.00 0.00 0.00 3.58
398 399 9.346005 TGATGCTCAACAAATCTATAATGTCAT 57.654 29.630 0.00 0.00 0.00 3.06
400 401 9.961265 ATGCTCAACAAATCTATAATGTCATTG 57.039 29.630 8.39 0.00 0.00 2.82
401 402 9.176460 TGCTCAACAAATCTATAATGTCATTGA 57.824 29.630 8.39 0.00 0.00 2.57
408 409 9.752961 CAAATCTATAATGTCATTGATTTGGCA 57.247 29.630 25.15 3.52 44.90 4.92
414 415 8.876275 ATAATGTCATTGATTTGGCAATACAC 57.124 30.769 8.39 0.00 36.39 2.90
415 416 5.070770 TGTCATTGATTTGGCAATACACC 57.929 39.130 0.00 0.00 36.39 4.16
416 417 4.771577 TGTCATTGATTTGGCAATACACCT 59.228 37.500 0.00 0.00 36.39 4.00
417 418 5.245751 TGTCATTGATTTGGCAATACACCTT 59.754 36.000 0.00 0.00 36.39 3.50
418 419 6.435591 TGTCATTGATTTGGCAATACACCTTA 59.564 34.615 0.00 0.00 36.39 2.69
419 420 6.974622 GTCATTGATTTGGCAATACACCTTAG 59.025 38.462 0.00 0.00 36.39 2.18
420 421 4.981806 TGATTTGGCAATACACCTTAGC 57.018 40.909 0.00 0.00 0.00 3.09
421 422 3.699038 TGATTTGGCAATACACCTTAGCC 59.301 43.478 0.00 0.00 45.41 3.93
422 423 3.449746 TTTGGCAATACACCTTAGCCT 57.550 42.857 0.00 0.00 45.42 4.58
423 424 4.577988 TTTGGCAATACACCTTAGCCTA 57.422 40.909 0.00 0.00 45.42 3.93
424 425 4.577988 TTGGCAATACACCTTAGCCTAA 57.422 40.909 0.00 0.00 45.42 2.69
425 426 4.577988 TGGCAATACACCTTAGCCTAAA 57.422 40.909 0.00 0.00 45.42 1.85
426 427 4.266714 TGGCAATACACCTTAGCCTAAAC 58.733 43.478 0.00 0.00 45.42 2.01
427 428 3.630769 GGCAATACACCTTAGCCTAAACC 59.369 47.826 0.00 0.00 42.01 3.27
428 429 3.630769 GCAATACACCTTAGCCTAAACCC 59.369 47.826 0.00 0.00 0.00 4.11
429 430 4.850680 CAATACACCTTAGCCTAAACCCA 58.149 43.478 0.00 0.00 0.00 4.51
430 431 5.445964 CAATACACCTTAGCCTAAACCCAT 58.554 41.667 0.00 0.00 0.00 4.00
431 432 5.727243 ATACACCTTAGCCTAAACCCATT 57.273 39.130 0.00 0.00 0.00 3.16
432 433 4.397919 ACACCTTAGCCTAAACCCATTT 57.602 40.909 0.00 0.00 0.00 2.32
433 434 4.747583 ACACCTTAGCCTAAACCCATTTT 58.252 39.130 0.00 0.00 0.00 1.82
434 435 5.894653 ACACCTTAGCCTAAACCCATTTTA 58.105 37.500 0.00 0.00 0.00 1.52
435 436 6.316513 ACACCTTAGCCTAAACCCATTTTAA 58.683 36.000 0.00 0.00 0.00 1.52
436 437 6.957606 ACACCTTAGCCTAAACCCATTTTAAT 59.042 34.615 0.00 0.00 0.00 1.40
437 438 7.123697 ACACCTTAGCCTAAACCCATTTTAATC 59.876 37.037 0.00 0.00 0.00 1.75
438 439 6.610020 ACCTTAGCCTAAACCCATTTTAATCC 59.390 38.462 0.00 0.00 0.00 3.01
439 440 6.609616 CCTTAGCCTAAACCCATTTTAATCCA 59.390 38.462 0.00 0.00 0.00 3.41
440 441 5.932619 AGCCTAAACCCATTTTAATCCAC 57.067 39.130 0.00 0.00 0.00 4.02
441 442 4.401202 AGCCTAAACCCATTTTAATCCACG 59.599 41.667 0.00 0.00 0.00 4.94
442 443 4.158949 GCCTAAACCCATTTTAATCCACGT 59.841 41.667 0.00 0.00 0.00 4.49
443 444 5.357596 GCCTAAACCCATTTTAATCCACGTA 59.642 40.000 0.00 0.00 0.00 3.57
444 445 6.040054 GCCTAAACCCATTTTAATCCACGTAT 59.960 38.462 0.00 0.00 0.00 3.06
445 446 7.417003 GCCTAAACCCATTTTAATCCACGTATT 60.417 37.037 0.00 0.00 0.00 1.89
446 447 8.471609 CCTAAACCCATTTTAATCCACGTATTT 58.528 33.333 0.00 0.00 0.00 1.40
478 479 9.770097 ATTTCTGTACATCACATAAGGAGTATG 57.230 33.333 0.00 0.00 44.61 2.39
479 480 8.533569 TTCTGTACATCACATAAGGAGTATGA 57.466 34.615 0.00 0.00 42.07 2.15
480 481 8.533569 TCTGTACATCACATAAGGAGTATGAA 57.466 34.615 0.00 0.00 42.07 2.57
481 482 8.633561 TCTGTACATCACATAAGGAGTATGAAG 58.366 37.037 0.00 0.00 42.07 3.02
482 483 8.533569 TGTACATCACATAAGGAGTATGAAGA 57.466 34.615 0.00 0.00 42.07 2.87
483 484 9.147732 TGTACATCACATAAGGAGTATGAAGAT 57.852 33.333 0.00 1.69 42.07 2.40
484 485 9.988815 GTACATCACATAAGGAGTATGAAGATT 57.011 33.333 0.50 0.23 42.07 2.40
489 490 9.213777 TCACATAAGGAGTATGAAGATTTAGGT 57.786 33.333 0.50 0.00 42.07 3.08
490 491 9.838339 CACATAAGGAGTATGAAGATTTAGGTT 57.162 33.333 0.50 0.00 42.07 3.50
491 492 9.838339 ACATAAGGAGTATGAAGATTTAGGTTG 57.162 33.333 0.50 0.00 42.07 3.77
494 495 8.970859 AAGGAGTATGAAGATTTAGGTTGATG 57.029 34.615 0.00 0.00 0.00 3.07
495 496 8.324191 AGGAGTATGAAGATTTAGGTTGATGA 57.676 34.615 0.00 0.00 0.00 2.92
496 497 8.772250 AGGAGTATGAAGATTTAGGTTGATGAA 58.228 33.333 0.00 0.00 0.00 2.57
497 498 9.396022 GGAGTATGAAGATTTAGGTTGATGAAA 57.604 33.333 0.00 0.00 0.00 2.69
519 520 8.964150 TGAAATATCTTATGTATGTTCGACACG 58.036 33.333 0.00 0.00 0.00 4.49
520 521 6.929587 ATATCTTATGTATGTTCGACACGC 57.070 37.500 0.00 0.00 0.00 5.34
521 522 4.099380 TCTTATGTATGTTCGACACGCA 57.901 40.909 0.00 0.00 0.00 5.24
522 523 4.678622 TCTTATGTATGTTCGACACGCAT 58.321 39.130 0.00 0.00 32.91 4.73
523 524 5.823353 TCTTATGTATGTTCGACACGCATA 58.177 37.500 0.00 0.00 31.46 3.14
524 525 6.443792 TCTTATGTATGTTCGACACGCATAT 58.556 36.000 0.00 0.00 32.27 1.78
525 526 7.586747 TCTTATGTATGTTCGACACGCATATA 58.413 34.615 0.00 0.00 32.27 0.86
526 527 7.536281 TCTTATGTATGTTCGACACGCATATAC 59.464 37.037 0.00 0.00 32.27 1.47
527 528 3.969981 TGTATGTTCGACACGCATATACG 59.030 43.478 0.00 0.00 39.50 3.06
528 529 1.193644 TGTTCGACACGCATATACGC 58.806 50.000 0.00 0.00 36.19 4.42
621 622 4.767255 CTGGAGCCGACCCAGTGC 62.767 72.222 0.00 0.00 44.66 4.40
624 625 4.101448 GAGCCGACCCAGTGCCAT 62.101 66.667 0.00 0.00 0.00 4.40
663 664 1.543429 CGAAGGCCCAACTATCCATCC 60.543 57.143 0.00 0.00 0.00 3.51
673 674 0.034059 CTATCCATCCACTCCGGCAC 59.966 60.000 0.00 0.00 33.14 5.01
695 696 2.286502 GCCCTCCCTCCTTCCCTT 60.287 66.667 0.00 0.00 0.00 3.95
699 700 1.694525 CTCCCTCCTTCCCTTCCCC 60.695 68.421 0.00 0.00 0.00 4.81
700 701 2.191846 TCCCTCCTTCCCTTCCCCT 61.192 63.158 0.00 0.00 0.00 4.79
703 704 1.694525 CTCCTTCCCTTCCCCTCCC 60.695 68.421 0.00 0.00 0.00 4.30
704 705 2.127297 CCTTCCCTTCCCCTCCCA 59.873 66.667 0.00 0.00 0.00 4.37
705 706 2.309504 CCTTCCCTTCCCCTCCCAC 61.310 68.421 0.00 0.00 0.00 4.61
706 707 1.541368 CTTCCCTTCCCCTCCCACA 60.541 63.158 0.00 0.00 0.00 4.17
707 708 1.072538 TTCCCTTCCCCTCCCACAA 60.073 57.895 0.00 0.00 0.00 3.33
792 795 3.276846 GCCGCACCGAACACAACT 61.277 61.111 0.00 0.00 0.00 3.16
811 814 5.119743 ACAACTTCCGTTTAGAATAGAACGC 59.880 40.000 3.34 0.00 45.20 4.84
812 815 4.179298 ACTTCCGTTTAGAATAGAACGCC 58.821 43.478 3.34 0.00 45.20 5.68
813 816 3.169355 TCCGTTTAGAATAGAACGCCC 57.831 47.619 3.34 0.00 45.20 6.13
819 822 0.620700 AGAATAGAACGCCCACCCCT 60.621 55.000 0.00 0.00 0.00 4.79
821 824 1.921869 AATAGAACGCCCACCCCTGG 61.922 60.000 0.00 0.00 37.29 4.45
894 897 7.246674 TCGGCTGCAAAAGTATTTATTCTAG 57.753 36.000 0.50 0.00 37.28 2.43
896 899 7.551262 TCGGCTGCAAAAGTATTTATTCTAGAA 59.449 33.333 7.82 7.82 37.28 2.10
898 901 9.855021 GGCTGCAAAAGTATTTATTCTAGAAAA 57.145 29.630 9.71 0.23 37.28 2.29
907 910 9.880157 AGTATTTATTCTAGAAAAAGGCGTACA 57.120 29.630 9.71 0.00 0.00 2.90
911 914 9.444600 TTTATTCTAGAAAAAGGCGTACAAGAT 57.555 29.630 9.71 0.00 0.00 2.40
912 915 7.923414 ATTCTAGAAAAAGGCGTACAAGATT 57.077 32.000 9.71 0.00 0.00 2.40
913 916 7.739498 TTCTAGAAAAAGGCGTACAAGATTT 57.261 32.000 1.68 0.00 0.00 2.17
1470 1491 7.880195 TGAAATTTGTTTGGTATTATTGGTGGG 59.120 33.333 0.00 0.00 0.00 4.61
1474 1495 4.021016 TGTTTGGTATTATTGGTGGGCAAC 60.021 41.667 0.00 0.00 0.00 4.17
1485 1506 2.375174 TGGTGGGCAACAAGAGATACTT 59.625 45.455 0.00 0.00 39.70 2.24
1500 1525 7.675962 AGAGATACTTAGCTATTGGTACGAG 57.324 40.000 0.00 0.00 0.00 4.18
1565 1590 6.037830 GGTTAATGTATACGGCAGTTGACAAT 59.962 38.462 0.00 0.00 30.81 2.71
1578 1603 6.528072 GGCAGTTGACAATATTTTTCTGCTAC 59.472 38.462 18.51 5.45 44.00 3.58
1857 3039 3.565764 TTGATGTTCTATCAGCCCCAG 57.434 47.619 0.00 0.00 0.00 4.45
1867 3049 1.078143 CAGCCCCAGTAGGAAGTGC 60.078 63.158 0.00 0.00 38.24 4.40
2007 3189 5.179555 GTGGATTATTACCGAATGAAGAGCC 59.820 44.000 0.00 0.00 0.00 4.70
2047 3230 6.145535 CAGAGTTCAGTTTTGCAACCTTATC 58.854 40.000 0.00 0.00 32.70 1.75
2121 3304 5.471456 CACCATGGAGTTATTTATGGAGCTC 59.529 44.000 21.47 4.71 42.05 4.09
3016 4279 7.394077 TGTCATTGTCACCATAAAATGAGATGT 59.606 33.333 0.00 0.00 39.14 3.06
3361 4625 2.860735 GTTCGCTGACGCAGATTCTAAT 59.139 45.455 10.46 0.00 39.84 1.73
3548 5272 2.437085 ATAGGTTGCTTTAGGTGGCC 57.563 50.000 0.00 0.00 0.00 5.36
3921 5658 8.970859 AAATTGCTAGTTCTATTCTATGCTGT 57.029 30.769 0.00 0.00 0.00 4.40
4032 5776 4.246458 GAGATGGTTGGACACTGTACTTC 58.754 47.826 0.00 0.00 0.00 3.01
4553 6415 6.016192 GGTCTACCATATTGTCGATCTTGAGA 60.016 42.308 0.00 0.00 35.64 3.27
4607 6497 3.073062 AGTCTTGCATACCTTGTGTCCTT 59.927 43.478 0.00 0.00 0.00 3.36
4608 6498 3.189287 GTCTTGCATACCTTGTGTCCTTG 59.811 47.826 0.00 0.00 0.00 3.61
4609 6499 2.198827 TGCATACCTTGTGTCCTTGG 57.801 50.000 0.00 0.00 0.00 3.61
4610 6500 1.271871 TGCATACCTTGTGTCCTTGGG 60.272 52.381 0.00 0.00 0.00 4.12
4611 6501 1.271926 GCATACCTTGTGTCCTTGGGT 60.272 52.381 0.00 0.00 0.00 4.51
4612 6502 2.711542 CATACCTTGTGTCCTTGGGTC 58.288 52.381 0.00 0.00 0.00 4.46
4613 6503 1.061546 TACCTTGTGTCCTTGGGTCC 58.938 55.000 0.00 0.00 0.00 4.46
4614 6504 0.697854 ACCTTGTGTCCTTGGGTCCT 60.698 55.000 0.00 0.00 0.00 3.85
4677 6567 6.996282 TCCTTTACTCACTTAACTTCCTTTGG 59.004 38.462 0.00 0.00 0.00 3.28
5070 7600 5.587443 TGATGCTTTTGATTCTGATGACGAT 59.413 36.000 0.00 0.00 0.00 3.73
5715 8252 1.070601 GCTTTGGTTCAACATGGGCTT 59.929 47.619 0.00 0.00 0.00 4.35
6116 8658 2.969262 TCTCGGTGGCATTCCATATACA 59.031 45.455 0.00 0.00 45.62 2.29
6515 9225 6.488715 AGAATGGAGCCAATAGTTTCTTCTT 58.511 36.000 0.00 0.00 0.00 2.52
6544 9254 3.428045 GGATCTTGCCAACGAATTCTTGG 60.428 47.826 22.36 22.36 41.17 3.61
6663 9373 8.213518 TGATCTGCAAAAATGTCTTATACTCC 57.786 34.615 0.00 0.00 0.00 3.85
6664 9374 8.049117 TGATCTGCAAAAATGTCTTATACTCCT 58.951 33.333 0.00 0.00 0.00 3.69
6665 9375 9.547753 GATCTGCAAAAATGTCTTATACTCCTA 57.452 33.333 0.00 0.00 0.00 2.94
6699 9409 5.606749 AGAGGGAGTACATTGCATAATACCA 59.393 40.000 0.00 0.00 0.00 3.25
6739 9449 1.344438 GACATGCACGAGGGGATATCA 59.656 52.381 4.83 0.00 0.00 2.15
6777 9523 0.733150 GTGCGTTTCTCATTAGGCCC 59.267 55.000 0.00 0.00 0.00 5.80
6838 9586 3.005539 GGTGGAGGGAGCTGCAGA 61.006 66.667 20.43 0.00 0.00 4.26
6868 9620 2.621055 GTGTGATGTAGGGTGCAAACAA 59.379 45.455 0.00 0.00 0.00 2.83
6870 9622 2.884639 GTGATGTAGGGTGCAAACAACT 59.115 45.455 0.00 0.00 32.44 3.16
6966 9896 3.443037 TGATTTTTGTTGTTGCGTGGAG 58.557 40.909 0.00 0.00 0.00 3.86
6998 9928 4.142249 TGTGATGAACGACGAGGATGTATT 60.142 41.667 0.00 0.00 0.00 1.89
7125 10222 4.994852 GCAACTAGATGAACAGTAACACCA 59.005 41.667 3.85 0.00 0.00 4.17
7186 10286 5.992489 GGCAAACGTTGACAAATTATCTC 57.008 39.130 0.00 0.00 38.99 2.75
7303 10404 6.490566 AAGCATTTTGGAGCATTGATTTTC 57.509 33.333 0.00 0.00 0.00 2.29
7319 10420 2.570442 TTTCTTTTTGCCGCGACTTT 57.430 40.000 8.23 0.00 0.00 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.381599 TTTGGGCAGCCATGGATCC 60.382 57.895 18.40 12.83 0.00 3.36
1 2 0.971959 TGTTTGGGCAGCCATGGATC 60.972 55.000 18.40 3.17 0.00 3.36
2 3 0.974010 CTGTTTGGGCAGCCATGGAT 60.974 55.000 18.40 6.18 0.00 3.41
3 4 1.607178 CTGTTTGGGCAGCCATGGA 60.607 57.895 18.40 0.00 0.00 3.41
4 5 2.652095 CCTGTTTGGGCAGCCATGG 61.652 63.158 15.19 7.63 35.28 3.66
5 6 1.909781 ACCTGTTTGGGCAGCCATG 60.910 57.895 15.19 0.00 41.11 3.66
6 7 1.909781 CACCTGTTTGGGCAGCCAT 60.910 57.895 15.19 0.00 41.11 4.40
7 8 2.521465 CACCTGTTTGGGCAGCCA 60.521 61.111 15.19 0.00 41.11 4.75
8 9 2.203480 TCACCTGTTTGGGCAGCC 60.203 61.111 1.26 1.26 41.11 4.85
9 10 2.924105 GCTCACCTGTTTGGGCAGC 61.924 63.158 0.00 0.00 43.10 5.25
10 11 3.359002 GCTCACCTGTTTGGGCAG 58.641 61.111 0.00 0.00 43.10 4.85
12 13 1.181098 ACATGCTCACCTGTTTGGGC 61.181 55.000 0.00 0.00 43.96 5.36
13 14 2.198827 TACATGCTCACCTGTTTGGG 57.801 50.000 0.00 0.00 41.11 4.12
14 15 4.789012 AAATACATGCTCACCTGTTTGG 57.211 40.909 0.00 0.00 42.93 3.28
15 16 5.406175 CCAAAAATACATGCTCACCTGTTTG 59.594 40.000 0.00 0.00 0.00 2.93
16 17 5.540911 CCAAAAATACATGCTCACCTGTTT 58.459 37.500 0.00 0.00 0.00 2.83
17 18 4.561326 GCCAAAAATACATGCTCACCTGTT 60.561 41.667 0.00 0.00 0.00 3.16
18 19 3.056607 GCCAAAAATACATGCTCACCTGT 60.057 43.478 0.00 0.00 0.00 4.00
19 20 3.056678 TGCCAAAAATACATGCTCACCTG 60.057 43.478 0.00 0.00 0.00 4.00
20 21 3.164268 TGCCAAAAATACATGCTCACCT 58.836 40.909 0.00 0.00 0.00 4.00
21 22 3.056607 ACTGCCAAAAATACATGCTCACC 60.057 43.478 0.00 0.00 0.00 4.02
22 23 4.082571 AGACTGCCAAAAATACATGCTCAC 60.083 41.667 0.00 0.00 0.00 3.51
23 24 4.081406 AGACTGCCAAAAATACATGCTCA 58.919 39.130 0.00 0.00 0.00 4.26
24 25 4.708726 AGACTGCCAAAAATACATGCTC 57.291 40.909 0.00 0.00 0.00 4.26
25 26 5.105756 GGTAAGACTGCCAAAAATACATGCT 60.106 40.000 0.00 0.00 0.00 3.79
26 27 5.102313 GGTAAGACTGCCAAAAATACATGC 58.898 41.667 0.00 0.00 0.00 4.06
27 28 6.266168 TGGTAAGACTGCCAAAAATACATG 57.734 37.500 0.00 0.00 33.86 3.21
28 29 6.493458 ACTTGGTAAGACTGCCAAAAATACAT 59.507 34.615 11.46 0.00 45.47 2.29
29 30 5.830991 ACTTGGTAAGACTGCCAAAAATACA 59.169 36.000 11.46 0.00 45.47 2.29
30 31 6.327279 ACTTGGTAAGACTGCCAAAAATAC 57.673 37.500 11.46 0.00 45.47 1.89
31 32 6.969993 AACTTGGTAAGACTGCCAAAAATA 57.030 33.333 11.46 0.00 45.47 1.40
32 33 5.869649 AACTTGGTAAGACTGCCAAAAAT 57.130 34.783 11.46 0.98 45.47 1.82
33 34 5.186021 TGAAACTTGGTAAGACTGCCAAAAA 59.814 36.000 11.46 0.00 45.47 1.94
34 35 4.707448 TGAAACTTGGTAAGACTGCCAAAA 59.293 37.500 11.46 0.00 45.47 2.44
35 36 4.274147 TGAAACTTGGTAAGACTGCCAAA 58.726 39.130 11.46 0.00 45.47 3.28
36 37 3.892284 TGAAACTTGGTAAGACTGCCAA 58.108 40.909 10.29 10.29 44.20 4.52
37 38 3.569194 TGAAACTTGGTAAGACTGCCA 57.431 42.857 0.00 0.00 35.18 4.92
38 39 4.911514 TTTGAAACTTGGTAAGACTGCC 57.088 40.909 0.00 0.00 0.00 4.85
39 40 8.135529 AGTTAATTTGAAACTTGGTAAGACTGC 58.864 33.333 0.00 0.00 33.39 4.40
40 41 9.450807 CAGTTAATTTGAAACTTGGTAAGACTG 57.549 33.333 0.00 0.00 34.99 3.51
41 42 9.403583 TCAGTTAATTTGAAACTTGGTAAGACT 57.596 29.630 0.00 0.00 34.99 3.24
59 60 9.379791 GCAACTGGTACTTACTTATCAGTTAAT 57.620 33.333 8.16 0.00 41.61 1.40
60 61 7.820872 GGCAACTGGTACTTACTTATCAGTTAA 59.179 37.037 8.16 0.00 41.61 2.01
61 62 7.325694 GGCAACTGGTACTTACTTATCAGTTA 58.674 38.462 8.16 0.00 41.61 2.24
62 63 6.171213 GGCAACTGGTACTTACTTATCAGTT 58.829 40.000 3.45 3.45 43.48 3.16
63 64 5.731591 GGCAACTGGTACTTACTTATCAGT 58.268 41.667 0.00 0.00 37.09 3.41
91 92 6.542005 TGGGTACAGACAAGCATTTATACATG 59.458 38.462 0.00 0.00 0.00 3.21
92 93 6.658849 TGGGTACAGACAAGCATTTATACAT 58.341 36.000 0.00 0.00 0.00 2.29
93 94 6.056090 TGGGTACAGACAAGCATTTATACA 57.944 37.500 0.00 0.00 0.00 2.29
94 95 6.995511 TTGGGTACAGACAAGCATTTATAC 57.004 37.500 0.00 0.00 0.00 1.47
95 96 6.094881 GCTTTGGGTACAGACAAGCATTTATA 59.905 38.462 11.39 0.00 0.00 0.98
96 97 5.105756 GCTTTGGGTACAGACAAGCATTTAT 60.106 40.000 11.39 0.00 0.00 1.40
97 98 4.217550 GCTTTGGGTACAGACAAGCATTTA 59.782 41.667 11.39 0.00 0.00 1.40
98 99 3.005791 GCTTTGGGTACAGACAAGCATTT 59.994 43.478 11.39 0.00 0.00 2.32
99 100 2.558359 GCTTTGGGTACAGACAAGCATT 59.442 45.455 11.39 0.00 0.00 3.56
100 101 2.162681 GCTTTGGGTACAGACAAGCAT 58.837 47.619 11.39 0.00 0.00 3.79
101 102 1.133945 TGCTTTGGGTACAGACAAGCA 60.134 47.619 13.83 13.83 32.47 3.91
102 103 1.266989 GTGCTTTGGGTACAGACAAGC 59.733 52.381 10.00 10.00 0.00 4.01
103 104 1.880027 GGTGCTTTGGGTACAGACAAG 59.120 52.381 0.00 0.00 32.05 3.16
104 105 1.493022 AGGTGCTTTGGGTACAGACAA 59.507 47.619 0.00 0.00 32.05 3.18
105 106 1.136828 AGGTGCTTTGGGTACAGACA 58.863 50.000 0.00 0.00 32.05 3.41
106 107 1.523758 CAGGTGCTTTGGGTACAGAC 58.476 55.000 0.00 0.00 32.05 3.51
107 108 0.250727 GCAGGTGCTTTGGGTACAGA 60.251 55.000 0.00 0.00 38.21 3.41
108 109 2.257353 GCAGGTGCTTTGGGTACAG 58.743 57.895 0.00 0.00 38.21 2.74
109 110 4.492604 GCAGGTGCTTTGGGTACA 57.507 55.556 0.00 0.00 38.21 2.90
119 120 2.225068 TAAGCGATAGAAGCAGGTGC 57.775 50.000 0.00 0.00 39.33 5.01
120 121 5.741388 ATTTTAAGCGATAGAAGCAGGTG 57.259 39.130 0.00 0.00 37.01 4.00
121 122 5.449177 GCAATTTTAAGCGATAGAAGCAGGT 60.449 40.000 0.00 0.00 37.01 4.00
122 123 4.972440 GCAATTTTAAGCGATAGAAGCAGG 59.028 41.667 0.00 0.00 37.01 4.85
123 124 5.453587 GTGCAATTTTAAGCGATAGAAGCAG 59.546 40.000 0.00 0.00 37.01 4.24
124 125 5.331902 GTGCAATTTTAAGCGATAGAAGCA 58.668 37.500 0.00 0.00 37.01 3.91
125 126 4.735338 GGTGCAATTTTAAGCGATAGAAGC 59.265 41.667 0.00 0.00 39.76 3.86
126 127 4.963953 CGGTGCAATTTTAAGCGATAGAAG 59.036 41.667 0.00 0.00 36.98 2.85
127 128 4.632251 TCGGTGCAATTTTAAGCGATAGAA 59.368 37.500 0.00 0.00 38.74 2.10
128 129 4.033587 GTCGGTGCAATTTTAAGCGATAGA 59.966 41.667 8.70 0.00 44.45 1.98
129 130 4.201773 TGTCGGTGCAATTTTAAGCGATAG 60.202 41.667 8.70 0.00 44.45 2.08
130 131 3.685272 TGTCGGTGCAATTTTAAGCGATA 59.315 39.130 8.70 4.66 44.45 2.92
131 132 2.486203 TGTCGGTGCAATTTTAAGCGAT 59.514 40.909 8.70 0.00 44.45 4.58
132 133 1.874231 TGTCGGTGCAATTTTAAGCGA 59.126 42.857 0.00 2.86 41.06 4.93
133 134 2.241722 CTGTCGGTGCAATTTTAAGCG 58.758 47.619 0.00 0.00 36.22 4.68
134 135 3.234386 GACTGTCGGTGCAATTTTAAGC 58.766 45.455 0.00 0.00 0.00 3.09
135 136 3.252215 TGGACTGTCGGTGCAATTTTAAG 59.748 43.478 3.11 0.00 43.13 1.85
136 137 3.215151 TGGACTGTCGGTGCAATTTTAA 58.785 40.909 3.11 0.00 43.13 1.52
137 138 2.852449 TGGACTGTCGGTGCAATTTTA 58.148 42.857 3.11 0.00 43.13 1.52
138 139 1.686355 TGGACTGTCGGTGCAATTTT 58.314 45.000 3.11 0.00 43.13 1.82
139 140 3.412722 TGGACTGTCGGTGCAATTT 57.587 47.368 3.11 0.00 43.13 1.82
144 145 1.021390 CCTTGATGGACTGTCGGTGC 61.021 60.000 1.07 0.00 38.35 5.01
145 146 0.321671 ACCTTGATGGACTGTCGGTG 59.678 55.000 1.07 0.00 39.71 4.94
146 147 1.825474 CTACCTTGATGGACTGTCGGT 59.175 52.381 1.07 5.01 39.71 4.69
147 148 2.100197 TCTACCTTGATGGACTGTCGG 58.900 52.381 1.07 0.00 39.71 4.79
148 149 3.429547 CCTTCTACCTTGATGGACTGTCG 60.430 52.174 1.07 0.00 39.71 4.35
149 150 3.680196 GCCTTCTACCTTGATGGACTGTC 60.680 52.174 0.00 0.00 39.71 3.51
150 151 2.237392 GCCTTCTACCTTGATGGACTGT 59.763 50.000 0.00 0.00 39.71 3.55
151 152 2.420687 GGCCTTCTACCTTGATGGACTG 60.421 54.545 0.00 0.00 36.63 3.51
152 153 1.840635 GGCCTTCTACCTTGATGGACT 59.159 52.381 0.00 0.00 36.63 3.85
153 154 1.559682 TGGCCTTCTACCTTGATGGAC 59.440 52.381 3.32 0.00 39.11 4.02
154 155 1.965414 TGGCCTTCTACCTTGATGGA 58.035 50.000 3.32 0.00 39.71 3.41
155 156 2.755103 GTTTGGCCTTCTACCTTGATGG 59.245 50.000 3.32 0.00 42.93 3.51
156 157 3.420893 TGTTTGGCCTTCTACCTTGATG 58.579 45.455 3.32 0.00 0.00 3.07
157 158 3.806949 TGTTTGGCCTTCTACCTTGAT 57.193 42.857 3.32 0.00 0.00 2.57
158 159 3.586470 TTGTTTGGCCTTCTACCTTGA 57.414 42.857 3.32 0.00 0.00 3.02
159 160 4.280677 TGATTTGTTTGGCCTTCTACCTTG 59.719 41.667 3.32 0.00 0.00 3.61
160 161 4.479158 TGATTTGTTTGGCCTTCTACCTT 58.521 39.130 3.32 0.00 0.00 3.50
161 162 4.112634 TGATTTGTTTGGCCTTCTACCT 57.887 40.909 3.32 0.00 0.00 3.08
162 163 4.864704 TTGATTTGTTTGGCCTTCTACC 57.135 40.909 3.32 0.00 0.00 3.18
163 164 7.728847 AAATTTGATTTGTTTGGCCTTCTAC 57.271 32.000 3.32 0.00 0.00 2.59
164 165 7.989741 TGAAAATTTGATTTGTTTGGCCTTCTA 59.010 29.630 3.32 0.00 31.77 2.10
165 166 6.827762 TGAAAATTTGATTTGTTTGGCCTTCT 59.172 30.769 3.32 0.00 31.77 2.85
166 167 7.025485 TGAAAATTTGATTTGTTTGGCCTTC 57.975 32.000 3.32 0.00 31.77 3.46
167 168 7.520292 CGATGAAAATTTGATTTGTTTGGCCTT 60.520 33.333 3.32 0.00 31.77 4.35
168 169 6.073112 CGATGAAAATTTGATTTGTTTGGCCT 60.073 34.615 3.32 0.00 31.77 5.19
169 170 6.079120 CGATGAAAATTTGATTTGTTTGGCC 58.921 36.000 0.00 0.00 31.77 5.36
170 171 6.657888 ACGATGAAAATTTGATTTGTTTGGC 58.342 32.000 0.00 0.00 31.77 4.52
171 172 7.798052 GGAACGATGAAAATTTGATTTGTTTGG 59.202 33.333 0.00 0.00 31.77 3.28
172 173 7.798052 GGGAACGATGAAAATTTGATTTGTTTG 59.202 33.333 0.00 0.00 31.77 2.93
173 174 7.497249 TGGGAACGATGAAAATTTGATTTGTTT 59.503 29.630 0.00 0.00 31.77 2.83
174 175 6.989169 TGGGAACGATGAAAATTTGATTTGTT 59.011 30.769 0.00 0.00 31.77 2.83
175 176 6.520272 TGGGAACGATGAAAATTTGATTTGT 58.480 32.000 0.00 0.00 31.77 2.83
176 177 7.418840 TTGGGAACGATGAAAATTTGATTTG 57.581 32.000 0.00 0.00 31.77 2.32
177 178 8.620116 AATTGGGAACGATGAAAATTTGATTT 57.380 26.923 0.00 0.00 33.59 2.17
178 179 8.096414 AGAATTGGGAACGATGAAAATTTGATT 58.904 29.630 0.00 0.00 33.59 2.57
179 180 7.614494 AGAATTGGGAACGATGAAAATTTGAT 58.386 30.769 0.00 0.00 33.59 2.57
180 181 6.991938 AGAATTGGGAACGATGAAAATTTGA 58.008 32.000 0.00 0.00 33.59 2.69
181 182 6.867816 TGAGAATTGGGAACGATGAAAATTTG 59.132 34.615 0.00 0.00 33.59 2.32
182 183 6.868339 GTGAGAATTGGGAACGATGAAAATTT 59.132 34.615 0.00 0.00 33.59 1.82
183 184 6.209391 AGTGAGAATTGGGAACGATGAAAATT 59.791 34.615 0.00 0.00 33.59 1.82
184 185 5.711976 AGTGAGAATTGGGAACGATGAAAAT 59.288 36.000 0.00 0.00 33.59 1.82
185 186 5.048782 CAGTGAGAATTGGGAACGATGAAAA 60.049 40.000 0.00 0.00 33.59 2.29
186 187 4.455533 CAGTGAGAATTGGGAACGATGAAA 59.544 41.667 0.00 0.00 33.59 2.69
187 188 4.002982 CAGTGAGAATTGGGAACGATGAA 58.997 43.478 0.00 0.00 33.59 2.57
188 189 3.599343 CAGTGAGAATTGGGAACGATGA 58.401 45.455 0.00 0.00 33.59 2.92
189 190 2.679837 CCAGTGAGAATTGGGAACGATG 59.320 50.000 0.00 0.00 33.59 3.84
190 191 2.305927 ACCAGTGAGAATTGGGAACGAT 59.694 45.455 0.00 0.00 38.82 3.73
191 192 1.697432 ACCAGTGAGAATTGGGAACGA 59.303 47.619 0.00 0.00 38.82 3.85
192 193 2.185004 ACCAGTGAGAATTGGGAACG 57.815 50.000 0.00 0.00 38.82 3.95
193 194 5.710099 TCATAAACCAGTGAGAATTGGGAAC 59.290 40.000 0.00 0.00 38.82 3.62
194 195 5.886609 TCATAAACCAGTGAGAATTGGGAA 58.113 37.500 0.00 0.00 38.82 3.97
195 196 5.512942 TCATAAACCAGTGAGAATTGGGA 57.487 39.130 0.00 0.00 38.82 4.37
196 197 6.153340 ACAATCATAAACCAGTGAGAATTGGG 59.847 38.462 0.00 0.00 38.82 4.12
197 198 7.161773 ACAATCATAAACCAGTGAGAATTGG 57.838 36.000 0.00 0.00 40.38 3.16
198 199 8.950210 AGTACAATCATAAACCAGTGAGAATTG 58.050 33.333 0.00 0.00 0.00 2.32
199 200 9.520515 AAGTACAATCATAAACCAGTGAGAATT 57.479 29.630 0.00 0.00 0.00 2.17
200 201 8.950210 CAAGTACAATCATAAACCAGTGAGAAT 58.050 33.333 0.00 0.00 0.00 2.40
201 202 7.094805 GCAAGTACAATCATAAACCAGTGAGAA 60.095 37.037 0.00 0.00 0.00 2.87
202 203 6.371548 GCAAGTACAATCATAAACCAGTGAGA 59.628 38.462 0.00 0.00 0.00 3.27
203 204 6.372659 AGCAAGTACAATCATAAACCAGTGAG 59.627 38.462 0.00 0.00 0.00 3.51
204 205 6.237901 AGCAAGTACAATCATAAACCAGTGA 58.762 36.000 0.00 0.00 0.00 3.41
205 206 6.500684 AGCAAGTACAATCATAAACCAGTG 57.499 37.500 0.00 0.00 0.00 3.66
206 207 8.677300 CATTAGCAAGTACAATCATAAACCAGT 58.323 33.333 0.00 0.00 0.00 4.00
207 208 8.677300 ACATTAGCAAGTACAATCATAAACCAG 58.323 33.333 0.00 0.00 0.00 4.00
208 209 8.574251 ACATTAGCAAGTACAATCATAAACCA 57.426 30.769 0.00 0.00 0.00 3.67
209 210 8.893727 AGACATTAGCAAGTACAATCATAAACC 58.106 33.333 0.00 0.00 0.00 3.27
214 215 9.836864 TGATTAGACATTAGCAAGTACAATCAT 57.163 29.630 0.00 0.00 29.93 2.45
215 216 9.098355 GTGATTAGACATTAGCAAGTACAATCA 57.902 33.333 0.00 0.00 31.25 2.57
216 217 9.098355 TGTGATTAGACATTAGCAAGTACAATC 57.902 33.333 0.00 0.00 0.00 2.67
217 218 9.618890 ATGTGATTAGACATTAGCAAGTACAAT 57.381 29.630 0.00 0.00 32.38 2.71
218 219 8.882736 CATGTGATTAGACATTAGCAAGTACAA 58.117 33.333 0.00 0.00 34.18 2.41
219 220 8.257306 TCATGTGATTAGACATTAGCAAGTACA 58.743 33.333 0.00 0.00 34.18 2.90
220 221 8.648557 TCATGTGATTAGACATTAGCAAGTAC 57.351 34.615 0.00 0.00 34.18 2.73
221 222 9.264719 CATCATGTGATTAGACATTAGCAAGTA 57.735 33.333 0.00 0.00 34.18 2.24
222 223 7.989170 TCATCATGTGATTAGACATTAGCAAGT 59.011 33.333 0.00 0.00 34.18 3.16
223 224 8.374327 TCATCATGTGATTAGACATTAGCAAG 57.626 34.615 0.00 0.00 34.18 4.01
224 225 8.735692 TTCATCATGTGATTAGACATTAGCAA 57.264 30.769 0.00 0.00 36.54 3.91
225 226 8.913487 ATTCATCATGTGATTAGACATTAGCA 57.087 30.769 0.00 0.00 36.54 3.49
231 232 9.398538 TCATCAAATTCATCATGTGATTAGACA 57.601 29.630 0.00 0.00 37.71 3.41
239 240 9.113876 CGATAACATCATCAAATTCATCATGTG 57.886 33.333 0.00 0.00 0.00 3.21
240 241 8.843262 ACGATAACATCATCAAATTCATCATGT 58.157 29.630 0.00 0.00 0.00 3.21
241 242 9.113876 CACGATAACATCATCAAATTCATCATG 57.886 33.333 0.00 0.00 0.00 3.07
242 243 8.843262 ACACGATAACATCATCAAATTCATCAT 58.157 29.630 0.00 0.00 0.00 2.45
243 244 8.212317 ACACGATAACATCATCAAATTCATCA 57.788 30.769 0.00 0.00 0.00 3.07
244 245 7.800380 GGACACGATAACATCATCAAATTCATC 59.200 37.037 0.00 0.00 0.00 2.92
245 246 7.282901 TGGACACGATAACATCATCAAATTCAT 59.717 33.333 0.00 0.00 0.00 2.57
246 247 6.597280 TGGACACGATAACATCATCAAATTCA 59.403 34.615 0.00 0.00 0.00 2.57
247 248 7.015226 TGGACACGATAACATCATCAAATTC 57.985 36.000 0.00 0.00 0.00 2.17
248 249 7.389803 TTGGACACGATAACATCATCAAATT 57.610 32.000 0.00 0.00 0.00 1.82
249 250 7.572523 ATTGGACACGATAACATCATCAAAT 57.427 32.000 0.00 0.00 0.00 2.32
250 251 7.389803 AATTGGACACGATAACATCATCAAA 57.610 32.000 0.00 0.00 0.00 2.69
251 252 7.389803 AAATTGGACACGATAACATCATCAA 57.610 32.000 0.00 0.00 0.00 2.57
252 253 8.499403 TTAAATTGGACACGATAACATCATCA 57.501 30.769 0.00 0.00 0.00 3.07
253 254 7.587757 GCTTAAATTGGACACGATAACATCATC 59.412 37.037 0.00 0.00 0.00 2.92
254 255 7.417612 GCTTAAATTGGACACGATAACATCAT 58.582 34.615 0.00 0.00 0.00 2.45
255 256 6.456315 CGCTTAAATTGGACACGATAACATCA 60.456 38.462 0.00 0.00 0.00 3.07
256 257 5.901884 CGCTTAAATTGGACACGATAACATC 59.098 40.000 0.00 0.00 0.00 3.06
257 258 5.353123 ACGCTTAAATTGGACACGATAACAT 59.647 36.000 0.00 0.00 0.00 2.71
258 259 4.691685 ACGCTTAAATTGGACACGATAACA 59.308 37.500 0.00 0.00 0.00 2.41
259 260 5.212589 ACGCTTAAATTGGACACGATAAC 57.787 39.130 0.00 0.00 0.00 1.89
260 261 5.868258 TGTACGCTTAAATTGGACACGATAA 59.132 36.000 0.00 0.00 0.00 1.75
261 262 5.409211 TGTACGCTTAAATTGGACACGATA 58.591 37.500 0.00 0.00 0.00 2.92
262 263 4.247258 TGTACGCTTAAATTGGACACGAT 58.753 39.130 0.00 0.00 0.00 3.73
263 264 3.651206 TGTACGCTTAAATTGGACACGA 58.349 40.909 0.00 0.00 0.00 4.35
264 265 4.593597 ATGTACGCTTAAATTGGACACG 57.406 40.909 0.00 0.00 0.00 4.49
265 266 5.907391 GCATATGTACGCTTAAATTGGACAC 59.093 40.000 4.29 0.00 0.00 3.67
266 267 5.586643 TGCATATGTACGCTTAAATTGGACA 59.413 36.000 4.29 0.00 0.00 4.02
267 268 6.055231 TGCATATGTACGCTTAAATTGGAC 57.945 37.500 4.29 0.00 0.00 4.02
268 269 6.875948 ATGCATATGTACGCTTAAATTGGA 57.124 33.333 0.00 0.00 0.00 3.53
269 270 8.073167 TGTAATGCATATGTACGCTTAAATTGG 58.927 33.333 0.00 0.00 0.00 3.16
270 271 8.891928 GTGTAATGCATATGTACGCTTAAATTG 58.108 33.333 0.00 0.00 0.00 2.32
271 272 7.796660 CGTGTAATGCATATGTACGCTTAAATT 59.203 33.333 15.15 0.00 0.00 1.82
272 273 7.042321 ACGTGTAATGCATATGTACGCTTAAAT 60.042 33.333 19.11 3.41 33.80 1.40
273 274 6.256104 ACGTGTAATGCATATGTACGCTTAAA 59.744 34.615 19.11 0.00 33.80 1.52
274 275 5.749588 ACGTGTAATGCATATGTACGCTTAA 59.250 36.000 19.11 0.00 33.80 1.85
275 276 5.283294 ACGTGTAATGCATATGTACGCTTA 58.717 37.500 19.11 0.00 33.80 3.09
276 277 4.116961 ACGTGTAATGCATATGTACGCTT 58.883 39.130 19.11 8.85 33.80 4.68
277 278 3.713288 ACGTGTAATGCATATGTACGCT 58.287 40.909 19.11 8.95 33.80 5.07
278 279 3.734231 AGACGTGTAATGCATATGTACGC 59.266 43.478 19.11 14.66 33.80 4.42
279 280 5.883328 AAGACGTGTAATGCATATGTACG 57.117 39.130 18.16 18.16 36.28 3.67
280 281 7.117454 GTGAAAGACGTGTAATGCATATGTAC 58.883 38.462 0.00 0.00 0.00 2.90
281 282 6.020201 CGTGAAAGACGTGTAATGCATATGTA 60.020 38.462 0.00 0.00 43.50 2.29
282 283 5.220397 CGTGAAAGACGTGTAATGCATATGT 60.220 40.000 0.00 0.00 43.50 2.29
283 284 5.190342 CGTGAAAGACGTGTAATGCATATG 58.810 41.667 0.00 0.00 43.50 1.78
284 285 5.389642 CGTGAAAGACGTGTAATGCATAT 57.610 39.130 0.00 0.00 43.50 1.78
285 286 4.833469 CGTGAAAGACGTGTAATGCATA 57.167 40.909 0.00 0.00 43.50 3.14
286 287 3.722555 CGTGAAAGACGTGTAATGCAT 57.277 42.857 0.00 0.00 43.50 3.96
297 298 5.350365 TGCATATTCCTACAACGTGAAAGAC 59.650 40.000 0.00 0.00 0.00 3.01
298 299 5.483811 TGCATATTCCTACAACGTGAAAGA 58.516 37.500 0.00 0.00 0.00 2.52
299 300 5.794687 TGCATATTCCTACAACGTGAAAG 57.205 39.130 0.00 0.00 0.00 2.62
300 301 8.984764 GTATATGCATATTCCTACAACGTGAAA 58.015 33.333 23.71 0.00 0.00 2.69
301 302 8.145122 TGTATATGCATATTCCTACAACGTGAA 58.855 33.333 23.71 0.00 0.00 3.18
302 303 7.662897 TGTATATGCATATTCCTACAACGTGA 58.337 34.615 23.71 0.00 0.00 4.35
303 304 7.883229 TGTATATGCATATTCCTACAACGTG 57.117 36.000 23.71 0.00 0.00 4.49
304 305 8.896320 TTTGTATATGCATATTCCTACAACGT 57.104 30.769 23.71 0.00 0.00 3.99
315 316 9.844790 CCGAAATGTGAATTTGTATATGCATAT 57.155 29.630 22.31 22.31 0.00 1.78
316 317 8.845227 ACCGAAATGTGAATTTGTATATGCATA 58.155 29.630 9.27 9.27 0.00 3.14
317 318 7.715657 ACCGAAATGTGAATTTGTATATGCAT 58.284 30.769 3.79 3.79 0.00 3.96
318 319 7.094508 ACCGAAATGTGAATTTGTATATGCA 57.905 32.000 0.00 0.00 0.00 3.96
319 320 7.915397 AGAACCGAAATGTGAATTTGTATATGC 59.085 33.333 0.00 0.00 0.00 3.14
320 321 9.225201 CAGAACCGAAATGTGAATTTGTATATG 57.775 33.333 0.00 0.00 0.00 1.78
321 322 8.956426 ACAGAACCGAAATGTGAATTTGTATAT 58.044 29.630 0.00 0.00 0.00 0.86
322 323 8.330466 ACAGAACCGAAATGTGAATTTGTATA 57.670 30.769 0.00 0.00 0.00 1.47
323 324 7.214467 ACAGAACCGAAATGTGAATTTGTAT 57.786 32.000 0.00 0.00 0.00 2.29
324 325 6.627395 ACAGAACCGAAATGTGAATTTGTA 57.373 33.333 0.00 0.00 0.00 2.41
325 326 5.514274 ACAGAACCGAAATGTGAATTTGT 57.486 34.783 0.00 0.00 0.00 2.83
326 327 7.922505 TTAACAGAACCGAAATGTGAATTTG 57.077 32.000 0.00 0.00 0.00 2.32
328 329 9.620660 GTATTTAACAGAACCGAAATGTGAATT 57.379 29.630 0.00 0.00 0.00 2.17
329 330 8.788806 TGTATTTAACAGAACCGAAATGTGAAT 58.211 29.630 0.00 0.00 33.01 2.57
330 331 8.071368 GTGTATTTAACAGAACCGAAATGTGAA 58.929 33.333 0.00 0.00 39.29 3.18
331 332 7.442969 AGTGTATTTAACAGAACCGAAATGTGA 59.557 33.333 0.00 0.00 39.29 3.58
332 333 7.581476 AGTGTATTTAACAGAACCGAAATGTG 58.419 34.615 0.00 0.00 39.29 3.21
333 334 7.739498 AGTGTATTTAACAGAACCGAAATGT 57.261 32.000 0.00 0.00 39.29 2.71
334 335 8.388103 CCTAGTGTATTTAACAGAACCGAAATG 58.612 37.037 0.00 0.00 39.29 2.32
335 336 8.098912 ACCTAGTGTATTTAACAGAACCGAAAT 58.901 33.333 0.00 0.00 39.29 2.17
336 337 7.444299 ACCTAGTGTATTTAACAGAACCGAAA 58.556 34.615 0.00 0.00 39.29 3.46
337 338 6.996509 ACCTAGTGTATTTAACAGAACCGAA 58.003 36.000 0.00 0.00 39.29 4.30
338 339 6.594788 ACCTAGTGTATTTAACAGAACCGA 57.405 37.500 0.00 0.00 39.29 4.69
339 340 5.514204 CGACCTAGTGTATTTAACAGAACCG 59.486 44.000 0.00 0.00 39.29 4.44
340 341 5.290400 GCGACCTAGTGTATTTAACAGAACC 59.710 44.000 0.00 0.00 39.29 3.62
341 342 5.865552 TGCGACCTAGTGTATTTAACAGAAC 59.134 40.000 0.00 0.00 39.29 3.01
342 343 6.028146 TGCGACCTAGTGTATTTAACAGAA 57.972 37.500 0.00 0.00 39.29 3.02
343 344 5.648178 TGCGACCTAGTGTATTTAACAGA 57.352 39.130 0.00 0.00 39.29 3.41
344 345 6.420008 GGTATGCGACCTAGTGTATTTAACAG 59.580 42.308 0.34 0.00 45.89 3.16
345 346 6.275335 GGTATGCGACCTAGTGTATTTAACA 58.725 40.000 0.34 0.00 45.89 2.41
346 347 6.760161 GGTATGCGACCTAGTGTATTTAAC 57.240 41.667 0.34 0.00 45.89 2.01
374 375 9.961265 CAATGACATTATAGATTTGTTGAGCAT 57.039 29.630 0.00 0.00 0.00 3.79
375 376 9.176460 TCAATGACATTATAGATTTGTTGAGCA 57.824 29.630 0.00 0.00 0.00 4.26
381 382 9.754382 GCCAAATCAATGACATTATAGATTTGT 57.246 29.630 28.70 11.51 45.17 2.83
382 383 9.752961 TGCCAAATCAATGACATTATAGATTTG 57.247 29.630 26.75 26.75 45.73 2.32
388 389 9.964303 GTGTATTGCCAAATCAATGACATTATA 57.036 29.630 0.00 0.00 37.27 0.98
389 390 7.927629 GGTGTATTGCCAAATCAATGACATTAT 59.072 33.333 0.00 0.00 37.27 1.28
390 391 7.123997 AGGTGTATTGCCAAATCAATGACATTA 59.876 33.333 0.00 0.00 37.27 1.90
391 392 6.070653 AGGTGTATTGCCAAATCAATGACATT 60.071 34.615 0.00 0.00 37.27 2.71
392 393 5.422970 AGGTGTATTGCCAAATCAATGACAT 59.577 36.000 0.00 0.00 37.27 3.06
393 394 4.771577 AGGTGTATTGCCAAATCAATGACA 59.228 37.500 0.00 0.00 37.27 3.58
394 395 5.329035 AGGTGTATTGCCAAATCAATGAC 57.671 39.130 0.00 0.00 37.27 3.06
395 396 5.999205 AAGGTGTATTGCCAAATCAATGA 57.001 34.783 0.00 0.00 37.27 2.57
396 397 5.750067 GCTAAGGTGTATTGCCAAATCAATG 59.250 40.000 0.00 0.00 37.27 2.82
397 398 5.163416 GGCTAAGGTGTATTGCCAAATCAAT 60.163 40.000 0.00 0.00 42.79 2.57
398 399 4.159506 GGCTAAGGTGTATTGCCAAATCAA 59.840 41.667 0.00 0.00 42.79 2.57
399 400 3.699038 GGCTAAGGTGTATTGCCAAATCA 59.301 43.478 0.00 0.00 42.79 2.57
400 401 3.954258 AGGCTAAGGTGTATTGCCAAATC 59.046 43.478 0.00 0.00 45.42 2.17
401 402 3.981212 AGGCTAAGGTGTATTGCCAAAT 58.019 40.909 0.00 0.00 45.42 2.32
402 403 3.449746 AGGCTAAGGTGTATTGCCAAA 57.550 42.857 0.00 0.00 45.42 3.28
403 404 4.577988 TTAGGCTAAGGTGTATTGCCAA 57.422 40.909 2.04 0.00 45.42 4.52
404 405 4.266714 GTTTAGGCTAAGGTGTATTGCCA 58.733 43.478 7.09 0.00 45.42 4.92
405 406 3.630769 GGTTTAGGCTAAGGTGTATTGCC 59.369 47.826 7.09 0.00 43.52 4.52
406 407 3.630769 GGGTTTAGGCTAAGGTGTATTGC 59.369 47.826 7.09 0.00 0.00 3.56
407 408 4.850680 TGGGTTTAGGCTAAGGTGTATTG 58.149 43.478 7.09 0.00 0.00 1.90
408 409 5.727243 ATGGGTTTAGGCTAAGGTGTATT 57.273 39.130 7.09 0.00 0.00 1.89
409 410 5.727243 AATGGGTTTAGGCTAAGGTGTAT 57.273 39.130 7.09 0.00 0.00 2.29
410 411 5.523883 AAATGGGTTTAGGCTAAGGTGTA 57.476 39.130 7.09 0.00 0.00 2.90
411 412 4.397919 AAATGGGTTTAGGCTAAGGTGT 57.602 40.909 7.09 0.00 0.00 4.16
412 413 6.844097 TTAAAATGGGTTTAGGCTAAGGTG 57.156 37.500 7.09 0.00 33.22 4.00
413 414 6.610020 GGATTAAAATGGGTTTAGGCTAAGGT 59.390 38.462 7.09 0.00 33.22 3.50
414 415 6.609616 TGGATTAAAATGGGTTTAGGCTAAGG 59.390 38.462 7.09 0.00 33.22 2.69
415 416 7.489160 GTGGATTAAAATGGGTTTAGGCTAAG 58.511 38.462 7.09 0.00 33.22 2.18
416 417 6.095720 CGTGGATTAAAATGGGTTTAGGCTAA 59.904 38.462 2.04 2.04 33.22 3.09
417 418 5.591067 CGTGGATTAAAATGGGTTTAGGCTA 59.409 40.000 0.00 0.00 33.22 3.93
418 419 4.401202 CGTGGATTAAAATGGGTTTAGGCT 59.599 41.667 0.00 0.00 33.22 4.58
419 420 4.158949 ACGTGGATTAAAATGGGTTTAGGC 59.841 41.667 0.00 0.00 33.22 3.93
420 421 5.907866 ACGTGGATTAAAATGGGTTTAGG 57.092 39.130 0.00 0.00 33.22 2.69
452 453 9.770097 CATACTCCTTATGTGATGTACAGAAAT 57.230 33.333 0.33 0.00 43.80 2.17
453 454 8.977412 TCATACTCCTTATGTGATGTACAGAAA 58.023 33.333 0.33 0.00 43.80 2.52
454 455 8.533569 TCATACTCCTTATGTGATGTACAGAA 57.466 34.615 0.33 0.00 43.80 3.02
455 456 8.533569 TTCATACTCCTTATGTGATGTACAGA 57.466 34.615 0.33 0.00 43.80 3.41
456 457 8.633561 TCTTCATACTCCTTATGTGATGTACAG 58.366 37.037 0.33 0.00 43.80 2.74
457 458 8.533569 TCTTCATACTCCTTATGTGATGTACA 57.466 34.615 0.00 0.00 44.87 2.90
458 459 9.988815 AATCTTCATACTCCTTATGTGATGTAC 57.011 33.333 0.00 0.00 39.05 2.90
463 464 9.213777 ACCTAAATCTTCATACTCCTTATGTGA 57.786 33.333 0.00 0.00 39.05 3.58
464 465 9.838339 AACCTAAATCTTCATACTCCTTATGTG 57.162 33.333 0.00 0.00 39.05 3.21
465 466 9.838339 CAACCTAAATCTTCATACTCCTTATGT 57.162 33.333 0.00 0.00 39.05 2.29
469 470 8.772250 TCATCAACCTAAATCTTCATACTCCTT 58.228 33.333 0.00 0.00 0.00 3.36
470 471 8.324191 TCATCAACCTAAATCTTCATACTCCT 57.676 34.615 0.00 0.00 0.00 3.69
471 472 8.964476 TTCATCAACCTAAATCTTCATACTCC 57.036 34.615 0.00 0.00 0.00 3.85
493 494 8.964150 CGTGTCGAACATACATAAGATATTTCA 58.036 33.333 0.00 0.00 0.00 2.69
494 495 7.945178 GCGTGTCGAACATACATAAGATATTTC 59.055 37.037 0.00 0.00 0.00 2.17
495 496 7.436970 TGCGTGTCGAACATACATAAGATATTT 59.563 33.333 0.00 0.00 0.00 1.40
496 497 6.921307 TGCGTGTCGAACATACATAAGATATT 59.079 34.615 0.00 0.00 0.00 1.28
497 498 6.443792 TGCGTGTCGAACATACATAAGATAT 58.556 36.000 0.00 0.00 0.00 1.63
498 499 5.823353 TGCGTGTCGAACATACATAAGATA 58.177 37.500 0.00 0.00 0.00 1.98
499 500 4.678622 TGCGTGTCGAACATACATAAGAT 58.321 39.130 0.00 0.00 0.00 2.40
500 501 4.099380 TGCGTGTCGAACATACATAAGA 57.901 40.909 0.00 0.00 0.00 2.10
501 502 6.690704 ATATGCGTGTCGAACATACATAAG 57.309 37.500 0.00 0.00 34.60 1.73
502 503 6.303733 CGTATATGCGTGTCGAACATACATAA 59.696 38.462 4.91 0.00 34.60 1.90
503 504 5.791480 CGTATATGCGTGTCGAACATACATA 59.209 40.000 4.91 1.70 35.05 2.29
504 505 4.615541 CGTATATGCGTGTCGAACATACAT 59.384 41.667 4.91 0.00 33.21 2.29
505 506 3.969981 CGTATATGCGTGTCGAACATACA 59.030 43.478 4.91 0.00 0.00 2.29
506 507 3.181556 GCGTATATGCGTGTCGAACATAC 60.182 47.826 14.75 0.00 0.00 2.39
507 508 2.975193 GCGTATATGCGTGTCGAACATA 59.025 45.455 14.75 0.00 0.00 2.29
508 509 1.784856 GCGTATATGCGTGTCGAACAT 59.215 47.619 14.75 0.00 0.00 2.71
509 510 1.193644 GCGTATATGCGTGTCGAACA 58.806 50.000 14.75 0.00 0.00 3.18
510 511 3.971620 GCGTATATGCGTGTCGAAC 57.028 52.632 14.75 0.00 0.00 3.95
519 520 7.234384 AGAAAAATATACAAGCGCGTATATGC 58.766 34.615 21.28 6.88 41.88 3.14
520 521 9.887189 CTAGAAAAATATACAAGCGCGTATATG 57.113 33.333 21.28 11.82 41.88 1.78
521 522 9.850628 TCTAGAAAAATATACAAGCGCGTATAT 57.149 29.630 17.25 17.25 43.66 0.86
522 523 9.850628 ATCTAGAAAAATATACAAGCGCGTATA 57.149 29.630 14.80 14.80 38.39 1.47
523 524 8.758633 ATCTAGAAAAATATACAAGCGCGTAT 57.241 30.769 8.43 11.81 36.13 3.06
524 525 8.583810 AATCTAGAAAAATATACAAGCGCGTA 57.416 30.769 8.43 0.00 0.00 4.42
525 526 7.478520 AATCTAGAAAAATATACAAGCGCGT 57.521 32.000 8.43 0.00 0.00 6.01
526 527 8.767944 AAAATCTAGAAAAATATACAAGCGCG 57.232 30.769 0.00 0.00 0.00 6.86
574 575 6.531240 CCCGTTACCTTTTTCATTGATGAATG 59.469 38.462 7.20 0.00 45.30 2.67
618 619 2.531522 AAACTGCTTTTGGATGGCAC 57.468 45.000 0.00 0.00 32.33 5.01
619 620 3.204526 CAAAAACTGCTTTTGGATGGCA 58.795 40.909 8.09 0.00 46.88 4.92
620 621 3.883631 CAAAAACTGCTTTTGGATGGC 57.116 42.857 8.09 0.00 46.88 4.40
647 648 0.846693 AGTGGATGGATAGTTGGGCC 59.153 55.000 0.00 0.00 0.00 5.80
693 694 1.004394 GGTAGTTTGTGGGAGGGGAAG 59.996 57.143 0.00 0.00 0.00 3.46
695 696 1.196104 CGGTAGTTTGTGGGAGGGGA 61.196 60.000 0.00 0.00 0.00 4.81
699 700 1.289109 CGTGCGGTAGTTTGTGGGAG 61.289 60.000 0.00 0.00 0.00 4.30
700 701 1.301087 CGTGCGGTAGTTTGTGGGA 60.301 57.895 0.00 0.00 0.00 4.37
703 704 1.959226 AGCCGTGCGGTAGTTTGTG 60.959 57.895 12.46 0.00 37.65 3.33
704 705 1.959226 CAGCCGTGCGGTAGTTTGT 60.959 57.895 12.46 0.00 37.65 2.83
705 706 2.860293 CAGCCGTGCGGTAGTTTG 59.140 61.111 12.46 0.69 37.65 2.93
706 707 3.047877 GCAGCCGTGCGGTAGTTT 61.048 61.111 12.46 0.00 40.71 2.66
792 795 3.055963 TGGGCGTTCTATTCTAAACGGAA 60.056 43.478 9.34 0.00 46.20 4.30
811 814 1.074951 GTTTCAGTCCAGGGGTGGG 59.925 63.158 0.00 0.00 0.00 4.61
812 815 0.036875 GAGTTTCAGTCCAGGGGTGG 59.963 60.000 0.00 0.00 0.00 4.61
813 816 0.320771 CGAGTTTCAGTCCAGGGGTG 60.321 60.000 0.00 0.00 0.00 4.61
819 822 1.006571 GTCGCCGAGTTTCAGTCCA 60.007 57.895 0.00 0.00 0.00 4.02
821 824 2.087009 CCGTCGCCGAGTTTCAGTC 61.087 63.158 0.00 0.00 35.63 3.51
894 897 6.822073 AACAAAATCTTGTACGCCTTTTTC 57.178 33.333 0.00 0.00 45.25 2.29
896 899 7.413548 CCAAAAACAAAATCTTGTACGCCTTTT 60.414 33.333 0.00 0.00 45.25 2.27
898 901 5.522097 CCAAAAACAAAATCTTGTACGCCTT 59.478 36.000 0.00 0.00 45.25 4.35
900 903 4.318475 GCCAAAAACAAAATCTTGTACGCC 60.318 41.667 0.00 0.00 45.25 5.68
901 904 4.268884 TGCCAAAAACAAAATCTTGTACGC 59.731 37.500 0.00 0.00 45.25 4.42
902 905 5.276631 GGTGCCAAAAACAAAATCTTGTACG 60.277 40.000 0.00 0.00 45.25 3.67
903 906 5.007234 GGGTGCCAAAAACAAAATCTTGTAC 59.993 40.000 0.00 0.00 45.25 2.90
904 907 5.119694 GGGTGCCAAAAACAAAATCTTGTA 58.880 37.500 0.00 0.00 45.25 2.41
905 908 5.864633 ATGGGTGCCAAAAACAAAATCTTGT 60.865 36.000 0.00 0.00 41.71 3.16
906 909 3.944015 TGGGTGCCAAAAACAAAATCTTG 59.056 39.130 0.00 0.00 38.61 3.02
907 910 4.227864 TGGGTGCCAAAAACAAAATCTT 57.772 36.364 0.00 0.00 0.00 2.40
908 911 3.922171 TGGGTGCCAAAAACAAAATCT 57.078 38.095 0.00 0.00 0.00 2.40
909 912 4.454161 GGTATGGGTGCCAAAAACAAAATC 59.546 41.667 0.00 0.00 36.95 2.17
911 914 3.741388 CGGTATGGGTGCCAAAAACAAAA 60.741 43.478 0.00 0.00 36.95 2.44
912 915 2.224066 CGGTATGGGTGCCAAAAACAAA 60.224 45.455 0.00 0.00 36.95 2.83
913 916 1.341531 CGGTATGGGTGCCAAAAACAA 59.658 47.619 0.00 0.00 36.95 2.83
1462 1483 2.610438 ATCTCTTGTTGCCCACCAAT 57.390 45.000 0.00 0.00 35.55 3.16
1463 1484 2.375174 AGTATCTCTTGTTGCCCACCAA 59.625 45.455 0.00 0.00 0.00 3.67
1466 1487 3.623510 GCTAAGTATCTCTTGTTGCCCAC 59.376 47.826 0.00 0.00 37.56 4.61
1467 1488 3.519510 AGCTAAGTATCTCTTGTTGCCCA 59.480 43.478 0.00 0.00 37.56 5.36
1470 1491 6.763610 ACCAATAGCTAAGTATCTCTTGTTGC 59.236 38.462 0.00 0.00 37.56 4.17
1474 1495 7.872881 TCGTACCAATAGCTAAGTATCTCTTG 58.127 38.462 0.00 0.00 37.56 3.02
1485 1506 7.774134 TGAACAATAACTCGTACCAATAGCTA 58.226 34.615 0.00 0.00 0.00 3.32
1565 1590 8.871629 TTTCCCAATGTAGTAGCAGAAAAATA 57.128 30.769 0.00 0.00 0.00 1.40
1578 1603 7.432869 TGAAACAGAACATTTTCCCAATGTAG 58.567 34.615 0.74 0.00 39.73 2.74
1715 2897 3.318839 GCTTCAGCCATTGCATTACCATA 59.681 43.478 0.00 0.00 41.13 2.74
1716 2898 2.101917 GCTTCAGCCATTGCATTACCAT 59.898 45.455 0.00 0.00 41.13 3.55
1717 2899 1.477700 GCTTCAGCCATTGCATTACCA 59.522 47.619 0.00 0.00 41.13 3.25
1857 3039 0.320697 AGTCCGGTTGCACTTCCTAC 59.679 55.000 0.00 0.00 0.00 3.18
2007 3189 4.050852 ACTCTGCAAGGCAAAGAAAAAG 57.949 40.909 0.00 0.00 38.41 2.27
2746 4006 9.922305 GAAGAGACAAATAAAACCATAAGATCG 57.078 33.333 0.00 0.00 0.00 3.69
2760 4020 9.102757 GACAGAATGCATTAGAAGAGACAAATA 57.897 33.333 12.97 0.00 42.53 1.40
2803 4064 2.892852 CCCTTGTGATTTGCCTGAGAAA 59.107 45.455 0.00 0.00 0.00 2.52
2914 4176 3.314357 GGGCGAATAGTAATTGGAACCAC 59.686 47.826 0.00 0.00 0.00 4.16
2918 4180 4.513406 AAGGGGCGAATAGTAATTGGAA 57.487 40.909 0.00 0.00 0.00 3.53
3016 4279 2.880268 CAACAGCAAGAAGTGGATGTGA 59.120 45.455 0.00 0.00 0.00 3.58
3061 4324 2.775490 AGAGCCCCAAAAGGAGTTTT 57.225 45.000 0.00 0.00 38.24 2.43
3361 4625 9.563898 CTTACTCGTGTCACAATACAAGTAATA 57.436 33.333 3.42 0.00 34.54 0.98
3527 5251 2.688446 GGCCACCTAAAGCAACCTATTC 59.312 50.000 0.00 0.00 0.00 1.75
3548 5272 2.673368 GGATGAAAACTAGCTCACACCG 59.327 50.000 0.00 0.00 0.00 4.94
4612 6502 4.533707 TGGGCATTCTAGAATCCATAGAGG 59.466 45.833 23.77 11.35 39.47 3.69
4613 6503 5.338219 CCTGGGCATTCTAGAATCCATAGAG 60.338 48.000 20.57 12.10 31.17 2.43
4614 6504 4.533707 CCTGGGCATTCTAGAATCCATAGA 59.466 45.833 20.57 4.37 28.31 1.98
4677 6567 6.344500 TCATCTGCAGATTTAGAGGAAGAAC 58.656 40.000 26.70 0.00 31.60 3.01
5641 8178 7.264221 TCATGCACTTTCAGTAAAATGTTTGT 58.736 30.769 0.00 0.00 0.00 2.83
5715 8252 2.637382 TGATCTTGTGTCACCCTTGCTA 59.363 45.455 0.00 0.00 0.00 3.49
6076 8618 3.698040 GAGATCACATTTTCACCAGCCAT 59.302 43.478 0.00 0.00 0.00 4.40
6116 8658 6.500684 AGAAAACATTACAGCATCGATGTT 57.499 33.333 25.47 18.07 42.66 2.71
6544 9254 1.329599 ACTCGTCCAGCAAAAACGTTC 59.670 47.619 0.00 0.00 37.64 3.95
6661 9371 7.130099 TGTACTCCCTCTGTTCATAAATAGGA 58.870 38.462 0.00 0.00 0.00 2.94
6662 9372 7.361457 TGTACTCCCTCTGTTCATAAATAGG 57.639 40.000 0.00 0.00 0.00 2.57
6663 9373 9.265901 CAATGTACTCCCTCTGTTCATAAATAG 57.734 37.037 0.00 0.00 0.00 1.73
6664 9374 7.715249 GCAATGTACTCCCTCTGTTCATAAATA 59.285 37.037 0.00 0.00 0.00 1.40
6665 9375 6.543831 GCAATGTACTCCCTCTGTTCATAAAT 59.456 38.462 0.00 0.00 0.00 1.40
6666 9376 5.880332 GCAATGTACTCCCTCTGTTCATAAA 59.120 40.000 0.00 0.00 0.00 1.40
6699 9409 7.467267 GCATGTCATGTTCGGTTCAAATATACT 60.467 37.037 14.26 0.00 0.00 2.12
6739 9449 5.351465 ACGCACTCGAATCATGTTATTTCTT 59.649 36.000 0.00 0.00 39.41 2.52
6838 9586 4.097437 CACCCTACATCACACTACGTACAT 59.903 45.833 0.00 0.00 0.00 2.29
6966 9896 4.569162 TCGTCGTTCATCACATTTATTCCC 59.431 41.667 0.00 0.00 0.00 3.97
7107 10204 7.867305 TGTTTTTGGTGTTACTGTTCATCTA 57.133 32.000 0.00 0.00 0.00 1.98
7171 10271 5.570589 GCAAGCACTGAGATAATTTGTCAAC 59.429 40.000 0.00 0.00 0.00 3.18
7186 10286 2.111756 GACGAAACTTTGCAAGCACTG 58.888 47.619 0.00 0.00 0.00 3.66
7303 10404 1.120437 GTGAAAGTCGCGGCAAAAAG 58.880 50.000 15.58 0.00 0.00 2.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.