Multiple sequence alignment - TraesCS5D01G273100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G273100 chr5D 100.000 4300 0 0 1 4300 375804466 375800167 0.000000e+00 7941.0
1 TraesCS5D01G273100 chr5D 92.188 256 20 0 2631 2886 459224877 459225132 3.160000e-96 363.0
2 TraesCS5D01G273100 chr5D 100.000 28 0 0 2436 2463 459224857 459224830 8.000000e-03 52.8
3 TraesCS5D01G273100 chr5B 93.402 2622 123 19 1695 4282 448662251 448659646 0.000000e+00 3838.0
4 TraesCS5D01G273100 chr5B 87.500 1048 74 29 445 1461 448663498 448662477 0.000000e+00 1157.0
5 TraesCS5D01G273100 chr5B 95.312 64 3 0 3693 3756 13523542 13523605 7.610000e-18 102.0
6 TraesCS5D01G273100 chr5A 93.214 2623 115 22 1695 4282 476897139 476894545 0.000000e+00 3799.0
7 TraesCS5D01G273100 chr5A 84.732 1192 85 42 441 1579 476898419 476897272 0.000000e+00 1103.0
8 TraesCS5D01G273100 chr4D 94.486 399 19 3 2325 2722 25433239 25433635 2.840000e-171 612.0
9 TraesCS5D01G273100 chr4D 93.017 358 25 0 1 358 80888471 80888828 1.370000e-144 523.0
10 TraesCS5D01G273100 chr4D 93.017 358 25 0 1 358 80897166 80897523 1.370000e-144 523.0
11 TraesCS5D01G273100 chr4D 89.610 77 7 1 3693 3769 446104143 446104218 3.540000e-16 97.1
12 TraesCS5D01G273100 chr7D 93.803 355 22 0 1 355 502738645 502738291 6.330000e-148 534.0
13 TraesCS5D01G273100 chr7D 75.151 994 215 22 2286 3272 212809598 212808630 5.100000e-119 438.0
14 TraesCS5D01G273100 chr3D 93.315 359 24 0 1 359 75067296 75067654 8.190000e-147 531.0
15 TraesCS5D01G273100 chrUn 93.296 358 24 0 1 358 20631491 20631848 2.940000e-146 529.0
16 TraesCS5D01G273100 chrUn 98.361 61 1 0 3696 3756 16375979 16376039 1.640000e-19 108.0
17 TraesCS5D01G273100 chrUn 100.000 30 0 0 359 388 132300601 132300572 6.010000e-04 56.5
18 TraesCS5D01G273100 chr6D 93.296 358 24 0 1 358 81734059 81733702 2.940000e-146 529.0
19 TraesCS5D01G273100 chr2D 93.315 359 23 1 1 359 120887941 120888298 2.940000e-146 529.0
20 TraesCS5D01G273100 chr2D 93.075 361 24 1 1 360 392380168 392380528 1.060000e-145 527.0
21 TraesCS5D01G273100 chr2D 95.312 64 3 0 3693 3756 352792637 352792700 7.610000e-18 102.0
22 TraesCS5D01G273100 chr2D 94.030 67 4 0 3693 3759 563148720 563148786 7.610000e-18 102.0
23 TraesCS5D01G273100 chr1D 92.857 364 23 2 1 361 383249835 383250198 3.810000e-145 525.0
24 TraesCS5D01G273100 chr7B 89.453 256 27 0 2631 2886 130117186 130116931 1.490000e-84 324.0
25 TraesCS5D01G273100 chr7B 94.737 76 2 2 2811 2886 647452097 647452024 2.720000e-22 117.0
26 TraesCS5D01G273100 chr2B 96.875 64 2 0 3693 3756 56928469 56928532 1.640000e-19 108.0
27 TraesCS5D01G273100 chr2B 96.875 64 2 0 3693 3756 787156086 787156149 1.640000e-19 108.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G273100 chr5D 375800167 375804466 4299 True 7941.0 7941 100.000 1 4300 1 chr5D.!!$R1 4299
1 TraesCS5D01G273100 chr5B 448659646 448663498 3852 True 2497.5 3838 90.451 445 4282 2 chr5B.!!$R1 3837
2 TraesCS5D01G273100 chr5A 476894545 476898419 3874 True 2451.0 3799 88.973 441 4282 2 chr5A.!!$R1 3841
3 TraesCS5D01G273100 chr7D 212808630 212809598 968 True 438.0 438 75.151 2286 3272 1 chr7D.!!$R1 986

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
816 852 0.105778 CTCCGCTCCATTCCTTCTCC 59.894 60.0 0.00 0.00 0.0 3.71 F
1615 1693 0.106708 TGCTTCTGGTCACTGTCCAC 59.893 55.0 0.00 0.00 0.0 4.02 F
1649 1727 0.169009 GCTTCTGGTCACCGAATTGC 59.831 55.0 2.18 0.76 0.0 3.56 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1630 1708 0.169009 GCAATTCGGTGACCAGAAGC 59.831 55.000 1.11 3.9 0.00 3.86 R
3196 3323 1.080354 ACCCTCAACGGATCCTGGA 59.920 57.895 10.75 0.0 33.16 3.86 R
3634 3774 5.444744 TCTTCTCTAGTTCTCTAGGCAGT 57.555 43.478 3.02 0.0 42.66 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.890612 CTCCTTTGCATGGATGGCA 58.109 52.632 9.06 0.00 40.00 4.92
23 24 4.870069 TGCATGGATGGCAAACCT 57.130 50.000 13.62 0.00 38.54 3.50
24 25 2.278849 TGCATGGATGGCAAACCTG 58.721 52.632 13.62 10.55 38.54 4.00
25 26 1.259142 TGCATGGATGGCAAACCTGG 61.259 55.000 13.62 0.00 38.54 4.45
33 34 3.680156 GCAAACCTGGCATTCGGA 58.320 55.556 0.00 0.00 0.00 4.55
34 35 2.192605 GCAAACCTGGCATTCGGAT 58.807 52.632 0.00 0.00 0.00 4.18
35 36 1.388547 GCAAACCTGGCATTCGGATA 58.611 50.000 0.00 0.00 0.00 2.59
36 37 1.956477 GCAAACCTGGCATTCGGATAT 59.044 47.619 0.00 0.00 0.00 1.63
37 38 2.287788 GCAAACCTGGCATTCGGATATG 60.288 50.000 0.00 0.00 0.00 1.78
38 39 3.213506 CAAACCTGGCATTCGGATATGA 58.786 45.455 0.00 0.00 0.00 2.15
39 40 3.576078 AACCTGGCATTCGGATATGAA 57.424 42.857 0.00 0.00 0.00 2.57
40 41 3.576078 ACCTGGCATTCGGATATGAAA 57.424 42.857 0.00 0.00 0.00 2.69
41 42 3.214328 ACCTGGCATTCGGATATGAAAC 58.786 45.455 0.00 0.00 0.00 2.78
42 43 3.117888 ACCTGGCATTCGGATATGAAACT 60.118 43.478 0.00 0.00 0.00 2.66
43 44 3.885297 CCTGGCATTCGGATATGAAACTT 59.115 43.478 0.00 0.00 0.00 2.66
44 45 4.023707 CCTGGCATTCGGATATGAAACTTC 60.024 45.833 0.00 0.00 0.00 3.01
45 46 4.522114 TGGCATTCGGATATGAAACTTCA 58.478 39.130 0.00 0.00 42.14 3.02
47 48 5.593909 TGGCATTCGGATATGAAACTTCATT 59.406 36.000 10.08 0.00 45.13 2.57
48 49 6.096705 TGGCATTCGGATATGAAACTTCATTT 59.903 34.615 10.08 2.94 45.13 2.32
49 50 6.638468 GGCATTCGGATATGAAACTTCATTTC 59.362 38.462 10.08 11.21 45.13 2.17
50 51 7.420800 GCATTCGGATATGAAACTTCATTTCT 58.579 34.615 17.08 3.44 45.13 2.52
51 52 7.589221 GCATTCGGATATGAAACTTCATTTCTC 59.411 37.037 17.08 9.96 45.13 2.87
52 53 8.834465 CATTCGGATATGAAACTTCATTTCTCT 58.166 33.333 17.08 0.00 45.13 3.10
53 54 7.776933 TCGGATATGAAACTTCATTTCTCTG 57.223 36.000 17.08 13.14 45.13 3.35
54 55 7.331026 TCGGATATGAAACTTCATTTCTCTGT 58.669 34.615 17.08 0.00 45.13 3.41
55 56 8.474831 TCGGATATGAAACTTCATTTCTCTGTA 58.525 33.333 17.08 0.00 45.13 2.74
56 57 9.098355 CGGATATGAAACTTCATTTCTCTGTAA 57.902 33.333 17.08 0.00 45.13 2.41
60 61 6.954944 TGAAACTTCATTTCTCTGTAAACCG 58.045 36.000 1.48 0.00 46.05 4.44
61 62 6.764085 TGAAACTTCATTTCTCTGTAAACCGA 59.236 34.615 1.48 0.00 46.05 4.69
62 63 6.541111 AACTTCATTTCTCTGTAAACCGAC 57.459 37.500 0.00 0.00 0.00 4.79
63 64 5.855045 ACTTCATTTCTCTGTAAACCGACT 58.145 37.500 0.00 0.00 0.00 4.18
64 65 5.927115 ACTTCATTTCTCTGTAAACCGACTC 59.073 40.000 0.00 0.00 0.00 3.36
65 66 5.723672 TCATTTCTCTGTAAACCGACTCT 57.276 39.130 0.00 0.00 0.00 3.24
66 67 5.470368 TCATTTCTCTGTAAACCGACTCTG 58.530 41.667 0.00 0.00 0.00 3.35
67 68 4.931661 TTTCTCTGTAAACCGACTCTGT 57.068 40.909 0.00 0.00 0.00 3.41
68 69 6.208007 TCATTTCTCTGTAAACCGACTCTGTA 59.792 38.462 0.00 0.00 0.00 2.74
69 70 5.368256 TTCTCTGTAAACCGACTCTGTAC 57.632 43.478 0.00 0.00 0.00 2.90
70 71 4.392047 TCTCTGTAAACCGACTCTGTACA 58.608 43.478 0.00 0.00 0.00 2.90
71 72 4.823442 TCTCTGTAAACCGACTCTGTACAA 59.177 41.667 0.00 0.00 0.00 2.41
72 73 4.863491 TCTGTAAACCGACTCTGTACAAC 58.137 43.478 0.00 0.00 0.00 3.32
73 74 3.981211 TGTAAACCGACTCTGTACAACC 58.019 45.455 0.00 0.00 0.00 3.77
74 75 2.538512 AAACCGACTCTGTACAACCC 57.461 50.000 0.00 0.00 0.00 4.11
75 76 1.713297 AACCGACTCTGTACAACCCT 58.287 50.000 0.00 0.00 0.00 4.34
76 77 2.592102 ACCGACTCTGTACAACCCTA 57.408 50.000 0.00 0.00 0.00 3.53
77 78 2.444421 ACCGACTCTGTACAACCCTAG 58.556 52.381 0.00 0.00 0.00 3.02
78 79 1.134560 CCGACTCTGTACAACCCTAGC 59.865 57.143 0.00 0.00 0.00 3.42
79 80 1.134560 CGACTCTGTACAACCCTAGCC 59.865 57.143 0.00 0.00 0.00 3.93
80 81 1.481363 GACTCTGTACAACCCTAGCCC 59.519 57.143 0.00 0.00 0.00 5.19
81 82 0.831307 CTCTGTACAACCCTAGCCCC 59.169 60.000 0.00 0.00 0.00 5.80
82 83 0.619543 TCTGTACAACCCTAGCCCCC 60.620 60.000 0.00 0.00 0.00 5.40
83 84 0.620700 CTGTACAACCCTAGCCCCCT 60.621 60.000 0.00 0.00 0.00 4.79
84 85 0.619543 TGTACAACCCTAGCCCCCTC 60.620 60.000 0.00 0.00 0.00 4.30
85 86 1.003835 TACAACCCTAGCCCCCTCC 59.996 63.158 0.00 0.00 0.00 4.30
86 87 2.884179 TACAACCCTAGCCCCCTCCG 62.884 65.000 0.00 0.00 0.00 4.63
87 88 4.817909 AACCCTAGCCCCCTCCGG 62.818 72.222 0.00 0.00 0.00 5.14
90 91 4.798682 CCTAGCCCCCTCCGGTGT 62.799 72.222 0.00 0.00 0.00 4.16
91 92 3.155167 CTAGCCCCCTCCGGTGTC 61.155 72.222 0.00 0.00 0.00 3.67
92 93 3.680196 TAGCCCCCTCCGGTGTCT 61.680 66.667 0.00 0.00 0.00 3.41
93 94 2.294170 CTAGCCCCCTCCGGTGTCTA 62.294 65.000 0.00 0.00 0.00 2.59
94 95 1.661990 TAGCCCCCTCCGGTGTCTAT 61.662 60.000 0.00 0.00 0.00 1.98
95 96 1.152398 GCCCCCTCCGGTGTCTATA 60.152 63.158 0.00 0.00 0.00 1.31
96 97 0.544595 GCCCCCTCCGGTGTCTATAT 60.545 60.000 0.00 0.00 0.00 0.86
97 98 1.272872 GCCCCCTCCGGTGTCTATATA 60.273 57.143 0.00 0.00 0.00 0.86
98 99 2.824303 GCCCCCTCCGGTGTCTATATAA 60.824 54.545 0.00 0.00 0.00 0.98
99 100 3.513517 CCCCCTCCGGTGTCTATATAAA 58.486 50.000 0.00 0.00 0.00 1.40
100 101 3.260128 CCCCCTCCGGTGTCTATATAAAC 59.740 52.174 0.00 0.00 0.00 2.01
101 102 3.260128 CCCCTCCGGTGTCTATATAAACC 59.740 52.174 0.00 0.68 0.00 3.27
109 110 6.402456 GGTGTCTATATAAACCGGAGAGTT 57.598 41.667 9.46 0.00 0.00 3.01
110 111 6.814043 GGTGTCTATATAAACCGGAGAGTTT 58.186 40.000 9.46 0.00 42.47 2.66
111 112 7.945134 GGTGTCTATATAAACCGGAGAGTTTA 58.055 38.462 9.46 2.38 44.12 2.01
112 113 8.081025 GGTGTCTATATAAACCGGAGAGTTTAG 58.919 40.741 9.46 2.60 43.46 1.85
113 114 8.628280 GTGTCTATATAAACCGGAGAGTTTAGT 58.372 37.037 9.46 0.00 43.46 2.24
114 115 8.844244 TGTCTATATAAACCGGAGAGTTTAGTC 58.156 37.037 9.46 1.36 43.46 2.59
115 116 8.296000 GTCTATATAAACCGGAGAGTTTAGTCC 58.704 40.741 9.46 0.00 43.46 3.85
123 124 2.358582 GGAGAGTTTAGTCCGTAGAGGC 59.641 54.545 0.00 0.00 40.77 4.70
124 125 3.015327 GAGAGTTTAGTCCGTAGAGGCA 58.985 50.000 0.00 0.00 40.77 4.75
125 126 3.428532 AGAGTTTAGTCCGTAGAGGCAA 58.571 45.455 0.00 0.00 40.77 4.52
126 127 4.024670 AGAGTTTAGTCCGTAGAGGCAAT 58.975 43.478 0.00 0.00 40.77 3.56
127 128 4.098196 AGAGTTTAGTCCGTAGAGGCAATC 59.902 45.833 0.00 0.00 40.77 2.67
128 129 3.767673 AGTTTAGTCCGTAGAGGCAATCA 59.232 43.478 0.00 0.00 40.77 2.57
129 130 3.795623 TTAGTCCGTAGAGGCAATCAC 57.204 47.619 0.00 0.00 40.77 3.06
130 131 1.557099 AGTCCGTAGAGGCAATCACA 58.443 50.000 0.00 0.00 40.77 3.58
131 132 1.899814 AGTCCGTAGAGGCAATCACAA 59.100 47.619 0.00 0.00 40.77 3.33
132 133 2.501723 AGTCCGTAGAGGCAATCACAAT 59.498 45.455 0.00 0.00 40.77 2.71
133 134 2.866762 GTCCGTAGAGGCAATCACAATC 59.133 50.000 0.00 0.00 40.77 2.67
134 135 2.499693 TCCGTAGAGGCAATCACAATCA 59.500 45.455 0.00 0.00 40.77 2.57
135 136 3.134623 TCCGTAGAGGCAATCACAATCAT 59.865 43.478 0.00 0.00 40.77 2.45
136 137 4.343814 TCCGTAGAGGCAATCACAATCATA 59.656 41.667 0.00 0.00 40.77 2.15
137 138 4.449068 CCGTAGAGGCAATCACAATCATAC 59.551 45.833 0.00 0.00 0.00 2.39
138 139 5.049828 CGTAGAGGCAATCACAATCATACA 58.950 41.667 0.00 0.00 0.00 2.29
139 140 5.176406 CGTAGAGGCAATCACAATCATACAG 59.824 44.000 0.00 0.00 0.00 2.74
140 141 4.458397 AGAGGCAATCACAATCATACAGG 58.542 43.478 0.00 0.00 0.00 4.00
141 142 2.954318 AGGCAATCACAATCATACAGGC 59.046 45.455 0.00 0.00 0.00 4.85
142 143 2.954318 GGCAATCACAATCATACAGGCT 59.046 45.455 0.00 0.00 0.00 4.58
143 144 4.136796 GGCAATCACAATCATACAGGCTA 58.863 43.478 0.00 0.00 0.00 3.93
144 145 4.214971 GGCAATCACAATCATACAGGCTAG 59.785 45.833 0.00 0.00 0.00 3.42
145 146 5.059161 GCAATCACAATCATACAGGCTAGA 58.941 41.667 0.00 0.00 0.00 2.43
146 147 5.049818 GCAATCACAATCATACAGGCTAGAC 60.050 44.000 0.00 0.00 0.00 2.59
147 148 5.876651 ATCACAATCATACAGGCTAGACA 57.123 39.130 0.00 0.00 0.00 3.41
148 149 5.876651 TCACAATCATACAGGCTAGACAT 57.123 39.130 0.00 0.00 0.00 3.06
149 150 5.847304 TCACAATCATACAGGCTAGACATC 58.153 41.667 0.00 0.00 0.00 3.06
150 151 5.600069 TCACAATCATACAGGCTAGACATCT 59.400 40.000 0.00 0.00 0.00 2.90
151 152 6.777580 TCACAATCATACAGGCTAGACATCTA 59.222 38.462 0.00 0.00 0.00 1.98
152 153 7.040132 TCACAATCATACAGGCTAGACATCTAG 60.040 40.741 11.00 11.00 46.63 2.43
153 154 6.210385 ACAATCATACAGGCTAGACATCTAGG 59.790 42.308 15.98 4.16 44.63 3.02
154 155 4.667573 TCATACAGGCTAGACATCTAGGG 58.332 47.826 15.98 0.00 44.63 3.53
155 156 4.106502 TCATACAGGCTAGACATCTAGGGT 59.893 45.833 15.98 0.00 44.63 4.34
156 157 3.406512 ACAGGCTAGACATCTAGGGTT 57.593 47.619 15.98 0.00 44.63 4.11
157 158 3.725634 ACAGGCTAGACATCTAGGGTTT 58.274 45.455 15.98 0.00 44.63 3.27
158 159 4.880164 ACAGGCTAGACATCTAGGGTTTA 58.120 43.478 15.98 0.00 44.63 2.01
159 160 4.896482 ACAGGCTAGACATCTAGGGTTTAG 59.104 45.833 15.98 7.98 44.63 1.85
160 161 3.898741 AGGCTAGACATCTAGGGTTTAGC 59.101 47.826 20.18 20.18 44.63 3.09
161 162 4.260139 GCTAGACATCTAGGGTTTAGCC 57.740 50.000 18.78 8.17 44.63 3.93
162 163 3.641906 GCTAGACATCTAGGGTTTAGCCA 59.358 47.826 18.78 0.00 44.63 4.75
163 164 4.284746 GCTAGACATCTAGGGTTTAGCCAT 59.715 45.833 18.78 0.00 44.63 4.40
164 165 5.221742 GCTAGACATCTAGGGTTTAGCCATT 60.222 44.000 18.78 0.00 44.63 3.16
165 166 6.014499 GCTAGACATCTAGGGTTTAGCCATTA 60.014 42.308 18.78 0.00 44.63 1.90
166 167 6.176014 AGACATCTAGGGTTTAGCCATTAC 57.824 41.667 0.26 0.00 39.65 1.89
167 168 4.957296 ACATCTAGGGTTTAGCCATTACG 58.043 43.478 0.26 0.00 39.65 3.18
168 169 4.652421 ACATCTAGGGTTTAGCCATTACGA 59.348 41.667 0.26 0.00 39.65 3.43
169 170 5.307196 ACATCTAGGGTTTAGCCATTACGAT 59.693 40.000 0.26 0.00 39.65 3.73
170 171 5.464030 TCTAGGGTTTAGCCATTACGATC 57.536 43.478 0.26 0.00 39.65 3.69
171 172 5.145564 TCTAGGGTTTAGCCATTACGATCT 58.854 41.667 0.26 0.00 39.65 2.75
172 173 4.338379 AGGGTTTAGCCATTACGATCTC 57.662 45.455 0.26 0.00 39.65 2.75
173 174 3.057734 GGGTTTAGCCATTACGATCTCG 58.942 50.000 0.00 0.00 41.74 4.04
174 175 3.243636 GGGTTTAGCCATTACGATCTCGA 60.244 47.826 6.60 0.00 40.13 4.04
175 176 4.557205 GGTTTAGCCATTACGATCTCGAT 58.443 43.478 6.60 0.00 38.95 3.59
176 177 4.386049 GGTTTAGCCATTACGATCTCGATG 59.614 45.833 6.60 0.78 38.95 3.84
177 178 4.848562 TTAGCCATTACGATCTCGATGT 57.151 40.909 6.60 0.00 43.02 3.06
178 179 5.952526 TTAGCCATTACGATCTCGATGTA 57.047 39.130 6.60 0.00 43.02 2.29
179 180 4.427096 AGCCATTACGATCTCGATGTAG 57.573 45.455 6.60 0.00 43.02 2.74
180 181 4.072839 AGCCATTACGATCTCGATGTAGA 58.927 43.478 6.60 0.00 43.02 2.59
181 182 4.702612 AGCCATTACGATCTCGATGTAGAT 59.297 41.667 6.60 0.00 43.02 1.98
182 183 5.031578 GCCATTACGATCTCGATGTAGATC 58.968 45.833 6.60 4.17 45.64 2.75
191 192 6.707440 ATCTCGATGTAGATCAACTCTTGT 57.293 37.500 0.29 0.00 35.28 3.16
192 193 7.809546 ATCTCGATGTAGATCAACTCTTGTA 57.190 36.000 0.29 0.00 35.28 2.41
193 194 7.625828 TCTCGATGTAGATCAACTCTTGTAA 57.374 36.000 0.29 0.00 35.28 2.41
194 195 7.473366 TCTCGATGTAGATCAACTCTTGTAAC 58.527 38.462 0.29 0.00 35.28 2.50
195 196 6.561614 TCGATGTAGATCAACTCTTGTAACC 58.438 40.000 0.29 0.00 35.28 2.85
196 197 6.377429 TCGATGTAGATCAACTCTTGTAACCT 59.623 38.462 0.29 0.00 35.28 3.50
197 198 6.693545 CGATGTAGATCAACTCTTGTAACCTC 59.306 42.308 0.29 0.00 35.28 3.85
198 199 7.415765 CGATGTAGATCAACTCTTGTAACCTCT 60.416 40.741 0.29 0.00 35.28 3.69
199 200 8.824756 ATGTAGATCAACTCTTGTAACCTCTA 57.175 34.615 0.00 0.00 35.28 2.43
200 201 8.824756 TGTAGATCAACTCTTGTAACCTCTAT 57.175 34.615 0.00 0.00 35.28 1.98
201 202 9.916360 TGTAGATCAACTCTTGTAACCTCTATA 57.084 33.333 0.00 0.00 35.28 1.31
204 205 9.127277 AGATCAACTCTTGTAACCTCTATACTC 57.873 37.037 0.00 0.00 0.00 2.59
205 206 8.824756 ATCAACTCTTGTAACCTCTATACTCA 57.175 34.615 0.00 0.00 0.00 3.41
206 207 8.824756 TCAACTCTTGTAACCTCTATACTCAT 57.175 34.615 0.00 0.00 0.00 2.90
207 208 8.904834 TCAACTCTTGTAACCTCTATACTCATC 58.095 37.037 0.00 0.00 0.00 2.92
208 209 8.687242 CAACTCTTGTAACCTCTATACTCATCA 58.313 37.037 0.00 0.00 0.00 3.07
209 210 8.824756 ACTCTTGTAACCTCTATACTCATCAA 57.175 34.615 0.00 0.00 0.00 2.57
210 211 9.256228 ACTCTTGTAACCTCTATACTCATCAAA 57.744 33.333 0.00 0.00 0.00 2.69
211 212 9.743057 CTCTTGTAACCTCTATACTCATCAAAG 57.257 37.037 0.00 0.00 0.00 2.77
212 213 9.256228 TCTTGTAACCTCTATACTCATCAAAGT 57.744 33.333 0.00 0.00 0.00 2.66
213 214 9.522804 CTTGTAACCTCTATACTCATCAAAGTC 57.477 37.037 0.00 0.00 0.00 3.01
214 215 8.589701 TGTAACCTCTATACTCATCAAAGTCA 57.410 34.615 0.00 0.00 0.00 3.41
215 216 9.031537 TGTAACCTCTATACTCATCAAAGTCAA 57.968 33.333 0.00 0.00 0.00 3.18
218 219 8.311395 ACCTCTATACTCATCAAAGTCAATCA 57.689 34.615 0.00 0.00 0.00 2.57
219 220 8.762645 ACCTCTATACTCATCAAAGTCAATCAA 58.237 33.333 0.00 0.00 0.00 2.57
220 221 9.258826 CCTCTATACTCATCAAAGTCAATCAAG 57.741 37.037 0.00 0.00 0.00 3.02
221 222 8.654230 TCTATACTCATCAAAGTCAATCAAGC 57.346 34.615 0.00 0.00 0.00 4.01
222 223 8.260114 TCTATACTCATCAAAGTCAATCAAGCA 58.740 33.333 0.00 0.00 0.00 3.91
223 224 5.624344 ACTCATCAAAGTCAATCAAGCAG 57.376 39.130 0.00 0.00 0.00 4.24
224 225 4.458295 ACTCATCAAAGTCAATCAAGCAGG 59.542 41.667 0.00 0.00 0.00 4.85
225 226 4.654915 TCATCAAAGTCAATCAAGCAGGA 58.345 39.130 0.00 0.00 0.00 3.86
226 227 5.072055 TCATCAAAGTCAATCAAGCAGGAA 58.928 37.500 0.00 0.00 0.00 3.36
227 228 5.182570 TCATCAAAGTCAATCAAGCAGGAAG 59.817 40.000 0.00 0.00 0.00 3.46
228 229 4.464008 TCAAAGTCAATCAAGCAGGAAGT 58.536 39.130 0.00 0.00 0.00 3.01
229 230 5.620206 TCAAAGTCAATCAAGCAGGAAGTA 58.380 37.500 0.00 0.00 0.00 2.24
230 231 5.702670 TCAAAGTCAATCAAGCAGGAAGTAG 59.297 40.000 0.00 0.00 0.00 2.57
231 232 4.213564 AGTCAATCAAGCAGGAAGTAGG 57.786 45.455 0.00 0.00 0.00 3.18
232 233 3.840666 AGTCAATCAAGCAGGAAGTAGGA 59.159 43.478 0.00 0.00 0.00 2.94
233 234 4.472833 AGTCAATCAAGCAGGAAGTAGGAT 59.527 41.667 0.00 0.00 0.00 3.24
234 235 5.663106 AGTCAATCAAGCAGGAAGTAGGATA 59.337 40.000 0.00 0.00 0.00 2.59
235 236 6.328672 AGTCAATCAAGCAGGAAGTAGGATAT 59.671 38.462 0.00 0.00 0.00 1.63
236 237 6.995091 GTCAATCAAGCAGGAAGTAGGATATT 59.005 38.462 0.00 0.00 0.00 1.28
237 238 8.150945 GTCAATCAAGCAGGAAGTAGGATATTA 58.849 37.037 0.00 0.00 0.00 0.98
238 239 8.150945 TCAATCAAGCAGGAAGTAGGATATTAC 58.849 37.037 0.00 0.00 0.00 1.89
239 240 6.420913 TCAAGCAGGAAGTAGGATATTACC 57.579 41.667 0.00 0.00 0.00 2.85
240 241 6.143915 TCAAGCAGGAAGTAGGATATTACCT 58.856 40.000 0.00 0.00 43.32 3.08
241 242 6.267928 TCAAGCAGGAAGTAGGATATTACCTC 59.732 42.308 0.00 0.00 41.00 3.85
242 243 5.088026 AGCAGGAAGTAGGATATTACCTCC 58.912 45.833 0.00 0.00 41.00 4.30
243 244 4.838986 GCAGGAAGTAGGATATTACCTCCA 59.161 45.833 5.42 0.00 36.85 3.86
244 245 5.485708 GCAGGAAGTAGGATATTACCTCCAT 59.514 44.000 5.42 0.00 36.85 3.41
245 246 6.013293 GCAGGAAGTAGGATATTACCTCCATT 60.013 42.308 5.42 0.00 36.85 3.16
246 247 7.180408 GCAGGAAGTAGGATATTACCTCCATTA 59.820 40.741 5.42 0.00 36.85 1.90
247 248 9.101325 CAGGAAGTAGGATATTACCTCCATTAA 57.899 37.037 5.42 0.00 36.85 1.40
248 249 9.327731 AGGAAGTAGGATATTACCTCCATTAAG 57.672 37.037 5.42 0.00 36.85 1.85
249 250 9.322769 GGAAGTAGGATATTACCTCCATTAAGA 57.677 37.037 0.00 0.00 41.00 2.10
273 274 5.446031 GGTTCGAACCTAGTTAAACATCG 57.554 43.478 34.98 0.00 45.75 3.84
274 275 4.925646 GGTTCGAACCTAGTTAAACATCGT 59.074 41.667 34.98 0.00 45.75 3.73
275 276 5.164022 GGTTCGAACCTAGTTAAACATCGTG 60.164 44.000 34.98 0.00 45.75 4.35
276 277 5.125100 TCGAACCTAGTTAAACATCGTGT 57.875 39.130 0.00 0.00 0.00 4.49
277 278 5.156355 TCGAACCTAGTTAAACATCGTGTC 58.844 41.667 0.00 0.00 0.00 3.67
278 279 4.325472 CGAACCTAGTTAAACATCGTGTCC 59.675 45.833 0.00 0.00 0.00 4.02
279 280 4.198028 ACCTAGTTAAACATCGTGTCCC 57.802 45.455 0.00 0.00 0.00 4.46
280 281 3.055602 ACCTAGTTAAACATCGTGTCCCC 60.056 47.826 0.00 0.00 0.00 4.81
281 282 2.484742 AGTTAAACATCGTGTCCCCC 57.515 50.000 0.00 0.00 0.00 5.40
282 283 1.081094 GTTAAACATCGTGTCCCCCG 58.919 55.000 0.00 0.00 0.00 5.73
283 284 0.674269 TTAAACATCGTGTCCCCCGC 60.674 55.000 0.00 0.00 0.00 6.13
284 285 2.524951 TAAACATCGTGTCCCCCGCC 62.525 60.000 0.00 0.00 0.00 6.13
286 287 4.530857 CATCGTGTCCCCCGCCTC 62.531 72.222 0.00 0.00 0.00 4.70
290 291 2.446036 GTGTCCCCCGCCTCCTAT 60.446 66.667 0.00 0.00 0.00 2.57
291 292 2.070650 GTGTCCCCCGCCTCCTATT 61.071 63.158 0.00 0.00 0.00 1.73
292 293 0.761702 GTGTCCCCCGCCTCCTATTA 60.762 60.000 0.00 0.00 0.00 0.98
293 294 0.761702 TGTCCCCCGCCTCCTATTAC 60.762 60.000 0.00 0.00 0.00 1.89
294 295 1.152183 TCCCCCGCCTCCTATTACC 60.152 63.158 0.00 0.00 0.00 2.85
295 296 1.152096 CCCCCGCCTCCTATTACCT 60.152 63.158 0.00 0.00 0.00 3.08
296 297 0.767060 CCCCCGCCTCCTATTACCTT 60.767 60.000 0.00 0.00 0.00 3.50
297 298 0.685660 CCCCGCCTCCTATTACCTTC 59.314 60.000 0.00 0.00 0.00 3.46
298 299 0.317479 CCCGCCTCCTATTACCTTCG 59.683 60.000 0.00 0.00 0.00 3.79
299 300 1.325355 CCGCCTCCTATTACCTTCGA 58.675 55.000 0.00 0.00 0.00 3.71
300 301 1.893801 CCGCCTCCTATTACCTTCGAT 59.106 52.381 0.00 0.00 0.00 3.59
301 302 3.087031 CCGCCTCCTATTACCTTCGATA 58.913 50.000 0.00 0.00 0.00 2.92
302 303 3.119566 CCGCCTCCTATTACCTTCGATAC 60.120 52.174 0.00 0.00 0.00 2.24
303 304 3.757493 CGCCTCCTATTACCTTCGATACT 59.243 47.826 0.00 0.00 0.00 2.12
304 305 4.142643 CGCCTCCTATTACCTTCGATACTC 60.143 50.000 0.00 0.00 0.00 2.59
305 306 4.765856 GCCTCCTATTACCTTCGATACTCA 59.234 45.833 0.00 0.00 0.00 3.41
306 307 5.106078 GCCTCCTATTACCTTCGATACTCAG 60.106 48.000 0.00 0.00 0.00 3.35
307 308 6.239396 CCTCCTATTACCTTCGATACTCAGA 58.761 44.000 0.00 0.00 0.00 3.27
308 309 6.149807 CCTCCTATTACCTTCGATACTCAGAC 59.850 46.154 0.00 0.00 0.00 3.51
309 310 5.699915 TCCTATTACCTTCGATACTCAGACG 59.300 44.000 0.00 0.00 0.00 4.18
310 311 3.687572 TTACCTTCGATACTCAGACGC 57.312 47.619 0.00 0.00 0.00 5.19
311 312 1.460504 ACCTTCGATACTCAGACGCA 58.539 50.000 0.00 0.00 0.00 5.24
312 313 1.132643 ACCTTCGATACTCAGACGCAC 59.867 52.381 0.00 0.00 0.00 5.34
313 314 1.132453 CCTTCGATACTCAGACGCACA 59.868 52.381 0.00 0.00 0.00 4.57
314 315 2.445316 CTTCGATACTCAGACGCACAG 58.555 52.381 0.00 0.00 0.00 3.66
315 316 1.450025 TCGATACTCAGACGCACAGT 58.550 50.000 0.00 0.00 0.00 3.55
316 317 1.810755 TCGATACTCAGACGCACAGTT 59.189 47.619 0.00 0.00 0.00 3.16
317 318 2.159558 TCGATACTCAGACGCACAGTTC 60.160 50.000 0.00 0.00 0.00 3.01
318 319 2.177977 GATACTCAGACGCACAGTTCG 58.822 52.381 0.00 0.00 0.00 3.95
319 320 0.240145 TACTCAGACGCACAGTTCGG 59.760 55.000 0.00 0.00 0.00 4.30
320 321 1.734477 CTCAGACGCACAGTTCGGG 60.734 63.158 0.00 0.00 0.00 5.14
321 322 2.142357 CTCAGACGCACAGTTCGGGA 62.142 60.000 0.00 0.00 0.00 5.14
322 323 2.022129 CAGACGCACAGTTCGGGAC 61.022 63.158 0.00 0.00 0.00 4.46
323 324 2.737376 GACGCACAGTTCGGGACC 60.737 66.667 0.00 0.00 0.00 4.46
324 325 4.309950 ACGCACAGTTCGGGACCC 62.310 66.667 0.00 0.00 0.00 4.46
326 327 4.717313 GCACAGTTCGGGACCCCC 62.717 72.222 4.46 0.00 41.09 5.40
327 328 2.928396 CACAGTTCGGGACCCCCT 60.928 66.667 4.46 0.00 42.67 4.79
328 329 1.611261 CACAGTTCGGGACCCCCTA 60.611 63.158 4.46 0.00 42.67 3.53
329 330 1.611556 ACAGTTCGGGACCCCCTAC 60.612 63.158 4.46 0.29 42.67 3.18
330 331 2.040114 AGTTCGGGACCCCCTACC 59.960 66.667 4.46 0.00 42.67 3.18
331 332 3.085947 GTTCGGGACCCCCTACCC 61.086 72.222 4.46 0.00 42.67 3.69
335 336 3.759101 GGGACCCCCTACCCGAGA 61.759 72.222 0.00 0.00 41.34 4.04
336 337 2.613421 GGACCCCCTACCCGAGAT 59.387 66.667 0.00 0.00 0.00 2.75
337 338 1.533513 GGACCCCCTACCCGAGATC 60.534 68.421 0.00 0.00 0.00 2.75
338 339 1.902432 GACCCCCTACCCGAGATCG 60.902 68.421 0.00 0.00 39.44 3.69
348 349 3.089784 CGAGATCGGCCGGTTTTG 58.910 61.111 27.83 14.51 35.37 2.44
349 350 1.447140 CGAGATCGGCCGGTTTTGA 60.447 57.895 27.83 4.46 35.37 2.69
350 351 1.693083 CGAGATCGGCCGGTTTTGAC 61.693 60.000 27.83 5.44 35.37 3.18
351 352 0.672401 GAGATCGGCCGGTTTTGACA 60.672 55.000 27.83 2.60 0.00 3.58
352 353 0.953960 AGATCGGCCGGTTTTGACAC 60.954 55.000 27.83 3.65 0.00 3.67
353 354 1.918868 GATCGGCCGGTTTTGACACC 61.919 60.000 27.83 0.00 0.00 4.16
360 361 1.652563 GGTTTTGACACCGACAGCC 59.347 57.895 0.00 0.00 0.00 4.85
361 362 0.818040 GGTTTTGACACCGACAGCCT 60.818 55.000 0.00 0.00 0.00 4.58
362 363 1.541670 GGTTTTGACACCGACAGCCTA 60.542 52.381 0.00 0.00 0.00 3.93
363 364 1.529865 GTTTTGACACCGACAGCCTAC 59.470 52.381 0.00 0.00 0.00 3.18
364 365 0.319211 TTTGACACCGACAGCCTACG 60.319 55.000 0.00 0.00 0.00 3.51
365 366 1.174078 TTGACACCGACAGCCTACGA 61.174 55.000 0.00 0.00 0.00 3.43
366 367 0.963856 TGACACCGACAGCCTACGAT 60.964 55.000 0.00 0.00 0.00 3.73
367 368 0.172803 GACACCGACAGCCTACGATT 59.827 55.000 0.00 0.00 0.00 3.34
368 369 1.402968 GACACCGACAGCCTACGATTA 59.597 52.381 0.00 0.00 0.00 1.75
369 370 1.820519 ACACCGACAGCCTACGATTAA 59.179 47.619 0.00 0.00 0.00 1.40
370 371 2.231964 ACACCGACAGCCTACGATTAAA 59.768 45.455 0.00 0.00 0.00 1.52
371 372 3.118884 ACACCGACAGCCTACGATTAAAT 60.119 43.478 0.00 0.00 0.00 1.40
372 373 4.098349 ACACCGACAGCCTACGATTAAATA 59.902 41.667 0.00 0.00 0.00 1.40
373 374 5.045215 CACCGACAGCCTACGATTAAATAA 58.955 41.667 0.00 0.00 0.00 1.40
374 375 5.521010 CACCGACAGCCTACGATTAAATAAA 59.479 40.000 0.00 0.00 0.00 1.40
375 376 5.751990 ACCGACAGCCTACGATTAAATAAAG 59.248 40.000 0.00 0.00 0.00 1.85
376 377 5.333111 CCGACAGCCTACGATTAAATAAAGC 60.333 44.000 0.00 0.00 0.00 3.51
388 389 8.500837 CGATTAAATAAAGCGGCAATATTGAA 57.499 30.769 19.73 6.41 43.13 2.69
389 390 8.963130 CGATTAAATAAAGCGGCAATATTGAAA 58.037 29.630 19.73 5.73 43.13 2.69
422 423 3.457560 AAAAACTCCCAGCTTCCCC 57.542 52.632 0.00 0.00 0.00 4.81
423 424 0.860457 AAAAACTCCCAGCTTCCCCT 59.140 50.000 0.00 0.00 0.00 4.79
424 425 0.405973 AAAACTCCCAGCTTCCCCTC 59.594 55.000 0.00 0.00 0.00 4.30
425 426 0.772124 AAACTCCCAGCTTCCCCTCA 60.772 55.000 0.00 0.00 0.00 3.86
426 427 0.772124 AACTCCCAGCTTCCCCTCAA 60.772 55.000 0.00 0.00 0.00 3.02
427 428 0.772124 ACTCCCAGCTTCCCCTCAAA 60.772 55.000 0.00 0.00 0.00 2.69
428 429 0.405585 CTCCCAGCTTCCCCTCAAAA 59.594 55.000 0.00 0.00 0.00 2.44
429 430 0.856982 TCCCAGCTTCCCCTCAAAAA 59.143 50.000 0.00 0.00 0.00 1.94
475 476 1.664873 CAAGCCCGTGCCAATTCAA 59.335 52.632 0.00 0.00 38.69 2.69
476 477 0.247185 CAAGCCCGTGCCAATTCAAT 59.753 50.000 0.00 0.00 38.69 2.57
477 478 0.532115 AAGCCCGTGCCAATTCAATC 59.468 50.000 0.00 0.00 38.69 2.67
478 479 0.611618 AGCCCGTGCCAATTCAATCA 60.612 50.000 0.00 0.00 38.69 2.57
479 480 0.246086 GCCCGTGCCAATTCAATCAA 59.754 50.000 0.00 0.00 0.00 2.57
480 481 1.994916 CCCGTGCCAATTCAATCAAC 58.005 50.000 0.00 0.00 0.00 3.18
481 482 1.545582 CCCGTGCCAATTCAATCAACT 59.454 47.619 0.00 0.00 0.00 3.16
482 483 2.752354 CCCGTGCCAATTCAATCAACTA 59.248 45.455 0.00 0.00 0.00 2.24
511 515 3.419828 CACACAGGTGCAAAGCGA 58.580 55.556 0.00 0.00 38.37 4.93
518 522 1.606668 CAGGTGCAAAGCGACCTTAAA 59.393 47.619 9.40 0.00 37.74 1.52
589 599 6.092807 AGCAAAGTAAATTAGCAGCAGTACTC 59.907 38.462 0.00 0.00 0.00 2.59
600 610 0.320697 GCAGTACTCCTCACCCGTTT 59.679 55.000 0.00 0.00 0.00 3.60
601 611 1.547372 GCAGTACTCCTCACCCGTTTA 59.453 52.381 0.00 0.00 0.00 2.01
602 612 2.028748 GCAGTACTCCTCACCCGTTTAA 60.029 50.000 0.00 0.00 0.00 1.52
811 847 2.770048 CCCCTCCGCTCCATTCCT 60.770 66.667 0.00 0.00 0.00 3.36
813 849 1.147153 CCCTCCGCTCCATTCCTTC 59.853 63.158 0.00 0.00 0.00 3.46
814 850 1.341156 CCCTCCGCTCCATTCCTTCT 61.341 60.000 0.00 0.00 0.00 2.85
816 852 0.105778 CTCCGCTCCATTCCTTCTCC 59.894 60.000 0.00 0.00 0.00 3.71
817 853 1.147153 CCGCTCCATTCCTTCTCCC 59.853 63.158 0.00 0.00 0.00 4.30
819 855 1.147153 GCTCCATTCCTTCTCCCCG 59.853 63.158 0.00 0.00 0.00 5.73
820 856 1.147153 CTCCATTCCTTCTCCCCGC 59.853 63.158 0.00 0.00 0.00 6.13
821 857 2.193248 CCATTCCTTCTCCCCGCC 59.807 66.667 0.00 0.00 0.00 6.13
824 860 3.962530 ATTCCTTCTCCCCGCCCCA 62.963 63.158 0.00 0.00 0.00 4.96
843 879 4.489771 CTCCCCACCCGTGCCATC 62.490 72.222 0.00 0.00 0.00 3.51
848 884 4.802051 CACCCGTGCCATCCCTGG 62.802 72.222 0.00 0.00 46.17 4.45
865 901 2.043980 GGCCGCGAATCCCAAGAAA 61.044 57.895 8.23 0.00 0.00 2.52
868 904 1.165270 CCGCGAATCCCAAGAAAACT 58.835 50.000 8.23 0.00 0.00 2.66
869 905 1.130561 CCGCGAATCCCAAGAAAACTC 59.869 52.381 8.23 0.00 0.00 3.01
870 906 1.130561 CGCGAATCCCAAGAAAACTCC 59.869 52.381 0.00 0.00 0.00 3.85
871 907 2.437413 GCGAATCCCAAGAAAACTCCT 58.563 47.619 0.00 0.00 0.00 3.69
872 908 2.820197 GCGAATCCCAAGAAAACTCCTT 59.180 45.455 0.00 0.00 0.00 3.36
878 914 2.814336 CCCAAGAAAACTCCTTCTTCCG 59.186 50.000 0.00 0.00 42.47 4.30
886 922 4.803908 CCTTCTTCCGGCCCAGCC 62.804 72.222 0.00 0.00 46.75 4.85
1285 1324 0.319211 CGTGTTTACTCCGGTGAGCA 60.319 55.000 11.17 0.69 42.74 4.26
1287 1326 1.045407 TGTTTACTCCGGTGAGCACT 58.955 50.000 11.17 0.00 42.74 4.40
1290 1329 2.167398 TTACTCCGGTGAGCACTGCC 62.167 60.000 11.17 0.00 42.74 4.85
1294 1333 4.694233 CGGTGAGCACTGCCAGCT 62.694 66.667 15.29 0.00 46.82 4.24
1296 1335 2.331132 GGTGAGCACTGCCAGCTTC 61.331 63.158 11.99 0.00 43.58 3.86
1297 1336 1.302351 GTGAGCACTGCCAGCTTCT 60.302 57.895 0.00 0.00 43.58 2.85
1298 1337 1.004080 TGAGCACTGCCAGCTTCTC 60.004 57.895 0.00 0.00 43.58 2.87
1301 1340 2.688794 GCACTGCCAGCTTCTCTGC 61.689 63.158 0.00 0.00 41.50 4.26
1302 1341 2.047465 ACTGCCAGCTTCTCTGCG 60.047 61.111 0.00 0.00 41.50 5.18
1303 1342 2.047465 CTGCCAGCTTCTCTGCGT 60.047 61.111 0.00 0.00 41.50 5.24
1304 1343 2.357881 TGCCAGCTTCTCTGCGTG 60.358 61.111 0.00 0.00 41.50 5.34
1305 1344 2.358003 GCCAGCTTCTCTGCGTGT 60.358 61.111 0.00 0.00 41.50 4.49
1306 1345 1.963338 GCCAGCTTCTCTGCGTGTT 60.963 57.895 0.00 0.00 41.50 3.32
1307 1346 1.864862 CCAGCTTCTCTGCGTGTTG 59.135 57.895 0.00 0.00 41.50 3.33
1308 1347 1.206072 CAGCTTCTCTGCGTGTTGC 59.794 57.895 0.00 0.00 46.70 4.17
1309 1348 1.963338 AGCTTCTCTGCGTGTTGCC 60.963 57.895 0.00 0.00 45.60 4.52
1310 1349 2.856032 CTTCTCTGCGTGTTGCCG 59.144 61.111 0.00 0.00 45.60 5.69
1311 1350 1.956170 CTTCTCTGCGTGTTGCCGT 60.956 57.895 0.00 0.00 45.60 5.68
1312 1351 2.162921 CTTCTCTGCGTGTTGCCGTG 62.163 60.000 0.00 0.00 45.60 4.94
1313 1352 2.636778 TTCTCTGCGTGTTGCCGTGA 62.637 55.000 0.00 0.00 45.60 4.35
1314 1353 2.029288 CTCTGCGTGTTGCCGTGAT 61.029 57.895 0.00 0.00 45.60 3.06
1316 1355 3.313007 CTGCGTGTTGCCGTGATGG 62.313 63.158 0.00 0.00 45.60 3.51
1334 1378 1.372128 GCTTGCGCCTTCTTGGTTG 60.372 57.895 4.18 0.00 38.35 3.77
1341 1385 1.879796 CGCCTTCTTGGTTGCTCTTCT 60.880 52.381 0.00 0.00 38.35 2.85
1347 1391 1.801178 CTTGGTTGCTCTTCTCGGTTC 59.199 52.381 0.00 0.00 0.00 3.62
1356 1400 4.735132 TCTCGGTTCAAGCGGCGG 62.735 66.667 9.50 0.41 39.89 6.13
1374 1428 2.813908 CGTTGGTGGTAGAGGCGC 60.814 66.667 0.00 0.00 0.00 6.53
1376 1430 3.712907 TTGGTGGTAGAGGCGCCC 61.713 66.667 26.15 15.34 0.00 6.13
1388 1442 0.107165 AGGCGCCCCATTTAGTTCTC 60.107 55.000 26.15 0.00 0.00 2.87
1391 1445 2.010043 GCGCCCCATTTAGTTCTCGAA 61.010 52.381 0.00 0.00 0.00 3.71
1397 1451 3.194861 CCATTTAGTTCTCGAATCGCCA 58.805 45.455 0.00 0.00 0.00 5.69
1413 1470 1.654220 CCAACTGTTCTTGCCGTGG 59.346 57.895 0.00 0.00 0.00 4.94
1417 1474 1.071471 CTGTTCTTGCCGTGGGAGT 59.929 57.895 0.00 0.00 0.00 3.85
1430 1487 4.400961 GGAGTTCCTGCAGCCGCT 62.401 66.667 8.66 4.97 39.64 5.52
1531 1592 5.220681 GCTAGCTTTACCTGCAGTAATGTTC 60.221 44.000 13.81 0.00 40.62 3.18
1539 1607 5.316167 ACCTGCAGTAATGTTCATTCAGAA 58.684 37.500 13.81 0.00 0.00 3.02
1551 1619 6.111382 TGTTCATTCAGAATCTCTCATGGTC 58.889 40.000 0.00 0.00 38.76 4.02
1586 1664 4.505566 CCACTAGGGTATGATCATTGGTGG 60.506 50.000 19.98 19.98 35.34 4.61
1594 1672 1.180029 GATCATTGGTGGTGCTTGCT 58.820 50.000 0.00 0.00 0.00 3.91
1595 1673 1.547372 GATCATTGGTGGTGCTTGCTT 59.453 47.619 0.00 0.00 0.00 3.91
1596 1674 1.412079 TCATTGGTGGTGCTTGCTTT 58.588 45.000 0.00 0.00 0.00 3.51
1597 1675 1.068895 TCATTGGTGGTGCTTGCTTTG 59.931 47.619 0.00 0.00 0.00 2.77
1598 1676 0.249996 ATTGGTGGTGCTTGCTTTGC 60.250 50.000 0.00 0.00 0.00 3.68
1600 1678 1.329171 TGGTGGTGCTTGCTTTGCTT 61.329 50.000 0.00 0.00 0.00 3.91
1601 1679 0.598419 GGTGGTGCTTGCTTTGCTTC 60.598 55.000 0.00 0.00 0.00 3.86
1603 1681 0.386476 TGGTGCTTGCTTTGCTTCTG 59.614 50.000 0.00 0.00 0.00 3.02
1605 1683 0.386838 GTGCTTGCTTTGCTTCTGGT 59.613 50.000 0.00 0.00 0.00 4.00
1606 1684 0.670162 TGCTTGCTTTGCTTCTGGTC 59.330 50.000 0.00 0.00 0.00 4.02
1607 1685 0.670162 GCTTGCTTTGCTTCTGGTCA 59.330 50.000 0.00 0.00 0.00 4.02
1609 1687 1.952296 CTTGCTTTGCTTCTGGTCACT 59.048 47.619 0.00 0.00 0.00 3.41
1610 1688 1.311859 TGCTTTGCTTCTGGTCACTG 58.688 50.000 0.00 0.00 0.00 3.66
1611 1689 1.312815 GCTTTGCTTCTGGTCACTGT 58.687 50.000 0.00 0.00 0.00 3.55
1612 1690 1.265365 GCTTTGCTTCTGGTCACTGTC 59.735 52.381 0.00 0.00 0.00 3.51
1613 1691 1.876156 CTTTGCTTCTGGTCACTGTCC 59.124 52.381 0.00 0.00 0.00 4.02
1614 1692 0.836606 TTGCTTCTGGTCACTGTCCA 59.163 50.000 0.00 0.00 0.00 4.02
1615 1693 0.106708 TGCTTCTGGTCACTGTCCAC 59.893 55.000 0.00 0.00 0.00 4.02
1616 1694 0.106708 GCTTCTGGTCACTGTCCACA 59.893 55.000 0.00 0.00 0.00 4.17
1631 1709 2.889578 CACAGTTTGTGGTGCATGC 58.110 52.632 11.82 11.82 44.27 4.06
1632 1710 0.386476 CACAGTTTGTGGTGCATGCT 59.614 50.000 20.33 0.00 44.27 3.79
1637 1715 0.675083 TTTGTGGTGCATGCTTCTGG 59.325 50.000 20.33 0.00 0.00 3.86
1647 1725 2.086869 CATGCTTCTGGTCACCGAATT 58.913 47.619 2.18 0.00 0.00 2.17
1648 1726 1.522668 TGCTTCTGGTCACCGAATTG 58.477 50.000 2.18 0.00 0.00 2.32
1649 1727 0.169009 GCTTCTGGTCACCGAATTGC 59.831 55.000 2.18 0.76 0.00 3.56
1650 1728 1.522668 CTTCTGGTCACCGAATTGCA 58.477 50.000 2.18 0.00 0.00 4.08
1651 1729 2.086869 CTTCTGGTCACCGAATTGCAT 58.913 47.619 2.18 0.00 0.00 3.96
1652 1730 1.737838 TCTGGTCACCGAATTGCATC 58.262 50.000 0.00 0.00 0.00 3.91
1653 1731 0.734889 CTGGTCACCGAATTGCATCC 59.265 55.000 0.00 0.00 0.00 3.51
1655 1733 1.271871 TGGTCACCGAATTGCATCCTT 60.272 47.619 0.00 0.00 0.00 3.36
1656 1734 1.133025 GGTCACCGAATTGCATCCTTG 59.867 52.381 0.00 0.00 0.00 3.61
1674 1752 4.022935 TCCTTGCATCATAATCCAATTCGC 60.023 41.667 0.00 0.00 0.00 4.70
1675 1753 3.921119 TGCATCATAATCCAATTCGCC 57.079 42.857 0.00 0.00 0.00 5.54
1677 1755 2.094545 GCATCATAATCCAATTCGCCCC 60.095 50.000 0.00 0.00 0.00 5.80
1679 1757 1.142060 TCATAATCCAATTCGCCCCGT 59.858 47.619 0.00 0.00 0.00 5.28
1681 1759 0.542333 TAATCCAATTCGCCCCGTCA 59.458 50.000 0.00 0.00 0.00 4.35
1682 1760 1.029947 AATCCAATTCGCCCCGTCAC 61.030 55.000 0.00 0.00 0.00 3.67
1683 1761 2.191786 ATCCAATTCGCCCCGTCACA 62.192 55.000 0.00 0.00 0.00 3.58
1684 1762 2.398554 CCAATTCGCCCCGTCACAG 61.399 63.158 0.00 0.00 0.00 3.66
1686 1764 0.744414 CAATTCGCCCCGTCACAGAT 60.744 55.000 0.00 0.00 0.00 2.90
1687 1765 0.828022 AATTCGCCCCGTCACAGATA 59.172 50.000 0.00 0.00 0.00 1.98
1688 1766 0.389391 ATTCGCCCCGTCACAGATAG 59.611 55.000 0.00 0.00 0.00 2.08
1689 1767 2.279517 CGCCCCGTCACAGATAGC 60.280 66.667 0.00 0.00 0.00 2.97
1690 1768 2.900273 GCCCCGTCACAGATAGCA 59.100 61.111 0.00 0.00 0.00 3.49
1691 1769 1.447643 GCCCCGTCACAGATAGCAT 59.552 57.895 0.00 0.00 0.00 3.79
1693 1771 1.747206 GCCCCGTCACAGATAGCATTT 60.747 52.381 0.00 0.00 0.00 2.32
1715 1817 0.469494 TCTGACCTGCTTGCTCAACA 59.531 50.000 0.00 0.00 0.00 3.33
1716 1818 1.072806 TCTGACCTGCTTGCTCAACAT 59.927 47.619 0.00 0.00 0.00 2.71
1717 1819 1.884579 CTGACCTGCTTGCTCAACATT 59.115 47.619 0.00 0.00 0.00 2.71
1718 1820 1.610038 TGACCTGCTTGCTCAACATTG 59.390 47.619 0.00 0.00 0.00 2.82
1719 1821 1.610522 GACCTGCTTGCTCAACATTGT 59.389 47.619 0.00 0.00 0.00 2.71
1720 1822 1.338973 ACCTGCTTGCTCAACATTGTG 59.661 47.619 0.00 0.00 0.00 3.33
1721 1823 1.415374 CTGCTTGCTCAACATTGTGC 58.585 50.000 10.89 10.89 45.16 4.57
1787 1890 2.408271 ACGACATCTGCCATGACAAT 57.592 45.000 0.00 0.00 0.00 2.71
2031 2155 1.338579 GGAGAGTGGCAGAGTTCAAGG 60.339 57.143 0.00 0.00 0.00 3.61
2037 2161 1.598130 GCAGAGTTCAAGGTGCCGT 60.598 57.895 0.00 0.00 0.00 5.68
2039 2163 0.951040 CAGAGTTCAAGGTGCCGTCC 60.951 60.000 0.00 0.00 0.00 4.79
2044 2168 2.430382 TTCAAGGTGCCGTCCTCGTC 62.430 60.000 0.00 0.00 36.74 4.20
2082 2206 3.822192 CGACGATCGGCAGGGACA 61.822 66.667 23.01 0.00 36.00 4.02
2088 2212 3.605749 ATCGGCAGGGACAACGGTG 62.606 63.158 0.00 0.00 0.00 4.94
2092 2216 2.347490 CAGGGACAACGGTGGGAG 59.653 66.667 4.97 0.00 0.00 4.30
2111 2235 3.760035 GACGCCGAAGCCCTGAGA 61.760 66.667 0.00 0.00 34.57 3.27
2128 2252 1.746615 GATTCCTCGGCAGCAGCAA 60.747 57.895 2.65 0.00 44.61 3.91
2130 2254 2.753009 ATTCCTCGGCAGCAGCAACA 62.753 55.000 2.65 0.00 44.61 3.33
2132 2256 3.429141 CTCGGCAGCAGCAACAGG 61.429 66.667 2.65 0.00 44.61 4.00
2151 2275 1.375908 GTGCCATTCTCGTCCAGCA 60.376 57.895 0.00 0.00 0.00 4.41
2294 2418 2.434185 GAGCGCGGGAACATGTCA 60.434 61.111 8.83 0.00 0.00 3.58
2790 2917 1.982395 CTGTACCACCTGGAGGCGA 60.982 63.158 10.33 0.00 39.32 5.54
2804 2931 1.137872 GAGGCGATCATGAACCAGACT 59.862 52.381 13.47 6.81 0.00 3.24
2807 2934 2.468831 GCGATCATGAACCAGACTCTC 58.531 52.381 0.00 0.00 0.00 3.20
3140 3267 3.148279 ATCCTGCGGGTCGAGGAC 61.148 66.667 12.43 0.00 36.57 3.85
3307 3443 4.712337 ACAGCTAGACCAGTAGCATAACTT 59.288 41.667 5.72 0.00 46.81 2.66
3505 3641 4.558178 TGTTTATGCCATGCTGAACAAAG 58.442 39.130 0.00 0.00 0.00 2.77
3506 3642 4.280425 TGTTTATGCCATGCTGAACAAAGA 59.720 37.500 0.00 0.00 0.00 2.52
3507 3643 4.707030 TTATGCCATGCTGAACAAAGAG 57.293 40.909 0.00 0.00 0.00 2.85
3508 3644 1.985473 TGCCATGCTGAACAAAGAGT 58.015 45.000 0.00 0.00 0.00 3.24
3509 3645 1.881973 TGCCATGCTGAACAAAGAGTC 59.118 47.619 0.00 0.00 0.00 3.36
3510 3646 1.881973 GCCATGCTGAACAAAGAGTCA 59.118 47.619 0.00 0.00 0.00 3.41
3511 3647 2.294233 GCCATGCTGAACAAAGAGTCAA 59.706 45.455 0.00 0.00 0.00 3.18
3512 3648 3.243501 GCCATGCTGAACAAAGAGTCAAA 60.244 43.478 0.00 0.00 0.00 2.69
3513 3649 4.543692 CCATGCTGAACAAAGAGTCAAAG 58.456 43.478 0.00 0.00 0.00 2.77
3634 3774 3.832490 TCTCTAGGACAAACTAAGCAGCA 59.168 43.478 0.00 0.00 0.00 4.41
3675 3815 5.587844 AGAAGATGAAGACATTACATGTGCC 59.412 40.000 9.11 0.00 45.03 5.01
3690 3834 1.000521 TGCCCATCAGGAAAGCTGG 60.001 57.895 0.00 0.00 38.24 4.85
3692 3836 1.076485 CCCATCAGGAAAGCTGGGG 60.076 63.158 0.00 0.00 43.91 4.96
3715 3859 4.156008 GTCCTCATTGTGTTTGTATCCACC 59.844 45.833 0.00 0.00 0.00 4.61
3830 3974 4.533222 GAAACGACGAATCCAACACAAAT 58.467 39.130 0.00 0.00 0.00 2.32
3831 3975 3.806316 ACGACGAATCCAACACAAATC 57.194 42.857 0.00 0.00 0.00 2.17
3835 3979 4.669197 CGACGAATCCAACACAAATCCTTC 60.669 45.833 0.00 0.00 0.00 3.46
4052 4196 2.315386 GGTGTCGAAGCAACGGACC 61.315 63.158 0.00 6.00 32.49 4.46
4114 4258 5.192927 GTTGGACACCCTTGATATGATCAA 58.807 41.667 0.00 2.14 46.30 2.57
4118 4262 4.202441 ACACCCTTGATATGATCAACAGC 58.798 43.478 0.00 0.00 43.84 4.40
4124 4268 5.768662 CCTTGATATGATCAACAGCTTGGAT 59.231 40.000 0.00 0.00 43.84 3.41
4240 4384 4.935352 TGAAACCCTGGATGAAACAAAG 57.065 40.909 0.00 0.00 0.00 2.77
4241 4385 3.640967 TGAAACCCTGGATGAAACAAAGG 59.359 43.478 0.00 0.00 0.00 3.11
4242 4386 3.328535 AACCCTGGATGAAACAAAGGT 57.671 42.857 0.00 0.00 0.00 3.50
4245 4389 2.558359 CCCTGGATGAAACAAAGGTGAC 59.442 50.000 0.00 0.00 0.00 3.67
4263 4412 1.612463 GACGCGGTAGGTTAGATGGAT 59.388 52.381 12.47 0.00 0.00 3.41
4264 4413 1.340248 ACGCGGTAGGTTAGATGGATG 59.660 52.381 12.47 0.00 0.00 3.51
4273 4422 7.283329 GGTAGGTTAGATGGATGTTTCTGAAT 58.717 38.462 0.00 0.00 0.00 2.57
4278 4427 4.851843 AGATGGATGTTTCTGAATGCTGA 58.148 39.130 0.00 0.00 0.00 4.26
4282 4431 4.216902 TGGATGTTTCTGAATGCTGAAGTG 59.783 41.667 0.00 0.00 34.16 3.16
4283 4432 3.631145 TGTTTCTGAATGCTGAAGTGC 57.369 42.857 0.00 0.00 34.16 4.40
4284 4433 2.031769 TGTTTCTGAATGCTGAAGTGCG 60.032 45.455 0.00 0.00 34.16 5.34
4285 4434 1.882912 TTCTGAATGCTGAAGTGCGT 58.117 45.000 0.00 0.00 35.36 5.24
4286 4435 1.882912 TCTGAATGCTGAAGTGCGTT 58.117 45.000 0.00 0.00 43.88 4.84
4287 4436 2.221169 TCTGAATGCTGAAGTGCGTTT 58.779 42.857 0.00 0.00 41.61 3.60
4288 4437 2.618241 TCTGAATGCTGAAGTGCGTTTT 59.382 40.909 0.00 0.00 41.61 2.43
4289 4438 3.066621 TCTGAATGCTGAAGTGCGTTTTT 59.933 39.130 0.00 0.00 41.61 1.94
4290 4439 3.114809 TGAATGCTGAAGTGCGTTTTTG 58.885 40.909 0.00 0.00 41.61 2.44
4291 4440 3.181492 TGAATGCTGAAGTGCGTTTTTGA 60.181 39.130 0.00 0.00 41.61 2.69
4292 4441 2.187351 TGCTGAAGTGCGTTTTTGAC 57.813 45.000 0.00 0.00 35.36 3.18
4293 4442 1.742831 TGCTGAAGTGCGTTTTTGACT 59.257 42.857 0.00 0.00 35.36 3.41
4294 4443 2.111756 GCTGAAGTGCGTTTTTGACTG 58.888 47.619 0.00 0.00 0.00 3.51
4295 4444 2.223249 GCTGAAGTGCGTTTTTGACTGA 60.223 45.455 0.00 0.00 0.00 3.41
4296 4445 3.730662 GCTGAAGTGCGTTTTTGACTGAA 60.731 43.478 0.00 0.00 0.00 3.02
4297 4446 4.601019 CTGAAGTGCGTTTTTGACTGAAT 58.399 39.130 0.00 0.00 0.00 2.57
4298 4447 4.350346 TGAAGTGCGTTTTTGACTGAATG 58.650 39.130 0.00 0.00 0.00 2.67
4299 4448 4.142491 TGAAGTGCGTTTTTGACTGAATGT 60.142 37.500 0.00 0.00 0.00 2.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.187974 TTGCCATCCATGCAAAGGAG 58.812 50.000 15.42 5.65 45.11 3.69
1 2 3.377848 TTGCCATCCATGCAAAGGA 57.622 47.368 12.99 12.99 45.11 3.36
5 6 0.609151 CAGGTTTGCCATCCATGCAA 59.391 50.000 0.00 0.00 46.30 4.08
6 7 1.259142 CCAGGTTTGCCATCCATGCA 61.259 55.000 0.00 0.00 37.19 3.96
7 8 1.518774 CCAGGTTTGCCATCCATGC 59.481 57.895 0.00 0.00 37.19 4.06
8 9 1.259142 TGCCAGGTTTGCCATCCATG 61.259 55.000 0.00 0.00 37.19 3.66
9 10 0.325860 ATGCCAGGTTTGCCATCCAT 60.326 50.000 0.00 0.00 37.19 3.41
10 11 0.544833 AATGCCAGGTTTGCCATCCA 60.545 50.000 0.00 0.00 37.19 3.41
11 12 0.176449 GAATGCCAGGTTTGCCATCC 59.824 55.000 0.00 0.00 37.19 3.51
12 13 0.179129 CGAATGCCAGGTTTGCCATC 60.179 55.000 0.00 0.00 37.19 3.51
13 14 1.606885 CCGAATGCCAGGTTTGCCAT 61.607 55.000 0.00 0.00 37.19 4.40
14 15 2.274645 CCGAATGCCAGGTTTGCCA 61.275 57.895 0.00 0.00 37.19 4.92
15 16 1.322538 ATCCGAATGCCAGGTTTGCC 61.323 55.000 0.00 0.00 0.00 4.52
16 17 1.388547 TATCCGAATGCCAGGTTTGC 58.611 50.000 0.00 0.00 0.00 3.68
17 18 3.213506 TCATATCCGAATGCCAGGTTTG 58.786 45.455 0.00 0.00 0.00 2.93
18 19 3.576078 TCATATCCGAATGCCAGGTTT 57.424 42.857 0.00 0.00 0.00 3.27
19 20 3.576078 TTCATATCCGAATGCCAGGTT 57.424 42.857 0.00 0.00 0.00 3.50
20 21 3.117888 AGTTTCATATCCGAATGCCAGGT 60.118 43.478 0.00 0.00 0.00 4.00
21 22 3.480470 AGTTTCATATCCGAATGCCAGG 58.520 45.455 0.00 0.00 0.00 4.45
22 23 4.576053 TGAAGTTTCATATCCGAATGCCAG 59.424 41.667 0.00 0.00 31.01 4.85
23 24 4.522114 TGAAGTTTCATATCCGAATGCCA 58.478 39.130 0.00 0.00 31.01 4.92
24 25 5.695851 ATGAAGTTTCATATCCGAATGCC 57.304 39.130 5.59 0.00 45.54 4.40
25 26 7.420800 AGAAATGAAGTTTCATATCCGAATGC 58.579 34.615 7.72 0.00 46.60 3.56
26 27 8.834465 AGAGAAATGAAGTTTCATATCCGAATG 58.166 33.333 7.72 0.00 46.60 2.67
27 28 8.834465 CAGAGAAATGAAGTTTCATATCCGAAT 58.166 33.333 7.72 0.00 46.60 3.34
28 29 7.824289 ACAGAGAAATGAAGTTTCATATCCGAA 59.176 33.333 7.72 0.00 46.60 4.30
29 30 7.331026 ACAGAGAAATGAAGTTTCATATCCGA 58.669 34.615 7.72 0.00 46.60 4.55
30 31 7.545362 ACAGAGAAATGAAGTTTCATATCCG 57.455 36.000 7.72 3.20 46.60 4.18
34 35 8.717821 CGGTTTACAGAGAAATGAAGTTTCATA 58.282 33.333 7.72 0.00 46.60 2.15
36 37 6.764085 TCGGTTTACAGAGAAATGAAGTTTCA 59.236 34.615 0.00 0.00 46.97 2.69
37 38 7.041984 AGTCGGTTTACAGAGAAATGAAGTTTC 60.042 37.037 0.00 0.00 45.31 2.78
38 39 6.766467 AGTCGGTTTACAGAGAAATGAAGTTT 59.234 34.615 0.00 0.00 0.00 2.66
39 40 6.289064 AGTCGGTTTACAGAGAAATGAAGTT 58.711 36.000 0.00 0.00 0.00 2.66
40 41 5.855045 AGTCGGTTTACAGAGAAATGAAGT 58.145 37.500 0.00 0.00 0.00 3.01
41 42 6.090088 CAGAGTCGGTTTACAGAGAAATGAAG 59.910 42.308 0.00 0.00 0.00 3.02
42 43 5.926542 CAGAGTCGGTTTACAGAGAAATGAA 59.073 40.000 0.00 0.00 0.00 2.57
43 44 5.010719 ACAGAGTCGGTTTACAGAGAAATGA 59.989 40.000 0.00 0.00 0.00 2.57
44 45 5.230942 ACAGAGTCGGTTTACAGAGAAATG 58.769 41.667 0.00 0.00 0.00 2.32
45 46 5.470047 ACAGAGTCGGTTTACAGAGAAAT 57.530 39.130 0.00 0.00 0.00 2.17
46 47 4.931661 ACAGAGTCGGTTTACAGAGAAA 57.068 40.909 0.00 0.00 0.00 2.52
47 48 4.823442 TGTACAGAGTCGGTTTACAGAGAA 59.177 41.667 0.00 0.00 0.00 2.87
48 49 4.392047 TGTACAGAGTCGGTTTACAGAGA 58.608 43.478 0.00 0.00 0.00 3.10
49 50 4.761235 TGTACAGAGTCGGTTTACAGAG 57.239 45.455 0.00 0.00 0.00 3.35
50 51 4.261741 GGTTGTACAGAGTCGGTTTACAGA 60.262 45.833 0.00 0.00 0.00 3.41
51 52 3.985925 GGTTGTACAGAGTCGGTTTACAG 59.014 47.826 0.00 0.00 0.00 2.74
52 53 3.243839 GGGTTGTACAGAGTCGGTTTACA 60.244 47.826 0.00 0.00 0.00 2.41
53 54 3.006217 AGGGTTGTACAGAGTCGGTTTAC 59.994 47.826 0.00 0.00 0.00 2.01
54 55 3.233507 AGGGTTGTACAGAGTCGGTTTA 58.766 45.455 0.00 0.00 0.00 2.01
55 56 2.044758 AGGGTTGTACAGAGTCGGTTT 58.955 47.619 0.00 0.00 0.00 3.27
56 57 1.713297 AGGGTTGTACAGAGTCGGTT 58.287 50.000 0.00 0.00 0.00 4.44
57 58 2.444421 CTAGGGTTGTACAGAGTCGGT 58.556 52.381 0.54 0.54 0.00 4.69
58 59 1.134560 GCTAGGGTTGTACAGAGTCGG 59.865 57.143 0.00 0.00 0.00 4.79
59 60 1.134560 GGCTAGGGTTGTACAGAGTCG 59.865 57.143 0.00 0.00 0.00 4.18
60 61 1.481363 GGGCTAGGGTTGTACAGAGTC 59.519 57.143 0.00 0.00 0.00 3.36
61 62 1.569653 GGGCTAGGGTTGTACAGAGT 58.430 55.000 0.00 0.00 0.00 3.24
62 63 0.831307 GGGGCTAGGGTTGTACAGAG 59.169 60.000 0.00 0.00 0.00 3.35
63 64 0.619543 GGGGGCTAGGGTTGTACAGA 60.620 60.000 0.00 0.00 0.00 3.41
64 65 0.620700 AGGGGGCTAGGGTTGTACAG 60.621 60.000 0.00 0.00 0.00 2.74
65 66 0.619543 GAGGGGGCTAGGGTTGTACA 60.620 60.000 0.00 0.00 0.00 2.90
66 67 1.343431 GGAGGGGGCTAGGGTTGTAC 61.343 65.000 0.00 0.00 0.00 2.90
67 68 1.003835 GGAGGGGGCTAGGGTTGTA 59.996 63.158 0.00 0.00 0.00 2.41
68 69 2.286197 GGAGGGGGCTAGGGTTGT 60.286 66.667 0.00 0.00 0.00 3.32
69 70 3.480133 CGGAGGGGGCTAGGGTTG 61.480 72.222 0.00 0.00 0.00 3.77
86 87 6.402456 AACTCTCCGGTTTATATAGACACC 57.598 41.667 0.00 2.59 0.00 4.16
87 88 8.628280 ACTAAACTCTCCGGTTTATATAGACAC 58.372 37.037 0.00 0.00 39.78 3.67
88 89 8.757982 ACTAAACTCTCCGGTTTATATAGACA 57.242 34.615 0.00 0.00 39.78 3.41
89 90 8.296000 GGACTAAACTCTCCGGTTTATATAGAC 58.704 40.741 0.00 0.00 39.78 2.59
90 91 7.173907 CGGACTAAACTCTCCGGTTTATATAGA 59.826 40.741 0.00 0.00 44.84 1.98
91 92 7.303998 CGGACTAAACTCTCCGGTTTATATAG 58.696 42.308 0.00 2.04 44.84 1.31
92 93 7.206981 CGGACTAAACTCTCCGGTTTATATA 57.793 40.000 0.00 0.00 44.84 0.86
93 94 6.081872 CGGACTAAACTCTCCGGTTTATAT 57.918 41.667 0.00 0.00 44.84 0.86
94 95 5.505173 CGGACTAAACTCTCCGGTTTATA 57.495 43.478 0.00 0.00 44.84 0.98
95 96 4.382345 CGGACTAAACTCTCCGGTTTAT 57.618 45.455 0.00 0.00 44.84 1.40
96 97 3.855689 CGGACTAAACTCTCCGGTTTA 57.144 47.619 0.00 0.00 44.84 2.01
97 98 2.738013 CGGACTAAACTCTCCGGTTT 57.262 50.000 0.00 0.00 44.84 3.27
102 103 2.358582 GCCTCTACGGACTAAACTCTCC 59.641 54.545 0.00 0.00 33.16 3.71
103 104 3.015327 TGCCTCTACGGACTAAACTCTC 58.985 50.000 0.00 0.00 33.16 3.20
104 105 3.083122 TGCCTCTACGGACTAAACTCT 57.917 47.619 0.00 0.00 33.16 3.24
105 106 3.863142 TTGCCTCTACGGACTAAACTC 57.137 47.619 0.00 0.00 33.16 3.01
106 107 3.767673 TGATTGCCTCTACGGACTAAACT 59.232 43.478 0.00 0.00 33.16 2.66
107 108 3.864003 GTGATTGCCTCTACGGACTAAAC 59.136 47.826 0.00 0.00 33.16 2.01
108 109 3.512329 TGTGATTGCCTCTACGGACTAAA 59.488 43.478 0.00 0.00 33.16 1.85
109 110 3.093814 TGTGATTGCCTCTACGGACTAA 58.906 45.455 0.00 0.00 33.16 2.24
110 111 2.730382 TGTGATTGCCTCTACGGACTA 58.270 47.619 0.00 0.00 33.16 2.59
111 112 1.557099 TGTGATTGCCTCTACGGACT 58.443 50.000 0.00 0.00 33.16 3.85
112 113 2.380084 TTGTGATTGCCTCTACGGAC 57.620 50.000 0.00 0.00 33.16 4.79
113 114 2.499693 TGATTGTGATTGCCTCTACGGA 59.500 45.455 0.00 0.00 33.16 4.69
114 115 2.905075 TGATTGTGATTGCCTCTACGG 58.095 47.619 0.00 0.00 0.00 4.02
115 116 5.049828 TGTATGATTGTGATTGCCTCTACG 58.950 41.667 0.00 0.00 0.00 3.51
116 117 5.468072 CCTGTATGATTGTGATTGCCTCTAC 59.532 44.000 0.00 0.00 0.00 2.59
117 118 5.614308 CCTGTATGATTGTGATTGCCTCTA 58.386 41.667 0.00 0.00 0.00 2.43
118 119 4.458397 CCTGTATGATTGTGATTGCCTCT 58.542 43.478 0.00 0.00 0.00 3.69
119 120 3.004106 GCCTGTATGATTGTGATTGCCTC 59.996 47.826 0.00 0.00 0.00 4.70
120 121 2.954318 GCCTGTATGATTGTGATTGCCT 59.046 45.455 0.00 0.00 0.00 4.75
121 122 2.954318 AGCCTGTATGATTGTGATTGCC 59.046 45.455 0.00 0.00 0.00 4.52
122 123 5.049818 GTCTAGCCTGTATGATTGTGATTGC 60.050 44.000 0.00 0.00 0.00 3.56
123 124 6.051074 TGTCTAGCCTGTATGATTGTGATTG 58.949 40.000 0.00 0.00 0.00 2.67
124 125 6.239217 TGTCTAGCCTGTATGATTGTGATT 57.761 37.500 0.00 0.00 0.00 2.57
125 126 5.876651 TGTCTAGCCTGTATGATTGTGAT 57.123 39.130 0.00 0.00 0.00 3.06
126 127 5.600069 AGATGTCTAGCCTGTATGATTGTGA 59.400 40.000 0.00 0.00 0.00 3.58
127 128 5.851720 AGATGTCTAGCCTGTATGATTGTG 58.148 41.667 0.00 0.00 0.00 3.33
128 129 6.210385 CCTAGATGTCTAGCCTGTATGATTGT 59.790 42.308 10.84 0.00 43.47 2.71
129 130 6.350864 CCCTAGATGTCTAGCCTGTATGATTG 60.351 46.154 10.84 0.00 43.47 2.67
130 131 5.719085 CCCTAGATGTCTAGCCTGTATGATT 59.281 44.000 10.84 0.00 43.47 2.57
131 132 5.222442 ACCCTAGATGTCTAGCCTGTATGAT 60.222 44.000 10.84 0.00 43.47 2.45
132 133 4.106502 ACCCTAGATGTCTAGCCTGTATGA 59.893 45.833 10.84 0.00 43.47 2.15
133 134 4.411927 ACCCTAGATGTCTAGCCTGTATG 58.588 47.826 10.84 0.00 43.47 2.39
134 135 4.750833 ACCCTAGATGTCTAGCCTGTAT 57.249 45.455 10.84 0.00 43.47 2.29
135 136 4.537945 AACCCTAGATGTCTAGCCTGTA 57.462 45.455 10.84 0.00 43.47 2.74
136 137 3.406512 AACCCTAGATGTCTAGCCTGT 57.593 47.619 10.84 5.70 43.47 4.00
137 138 4.262249 GCTAAACCCTAGATGTCTAGCCTG 60.262 50.000 10.84 5.19 43.47 4.85
138 139 3.898741 GCTAAACCCTAGATGTCTAGCCT 59.101 47.826 10.84 0.00 43.47 4.58
139 140 3.007074 GGCTAAACCCTAGATGTCTAGCC 59.993 52.174 16.28 16.28 43.47 3.93
140 141 3.641906 TGGCTAAACCCTAGATGTCTAGC 59.358 47.826 10.84 8.43 43.47 3.42
141 142 6.426646 AATGGCTAAACCCTAGATGTCTAG 57.573 41.667 9.59 9.59 44.22 2.43
142 143 6.015688 CGTAATGGCTAAACCCTAGATGTCTA 60.016 42.308 0.00 0.00 37.83 2.59
143 144 5.221461 CGTAATGGCTAAACCCTAGATGTCT 60.221 44.000 0.00 0.00 37.83 3.41
144 145 4.989168 CGTAATGGCTAAACCCTAGATGTC 59.011 45.833 0.00 0.00 37.83 3.06
145 146 4.652421 TCGTAATGGCTAAACCCTAGATGT 59.348 41.667 0.00 0.00 37.83 3.06
146 147 5.209818 TCGTAATGGCTAAACCCTAGATG 57.790 43.478 0.00 0.00 37.83 2.90
147 148 5.780793 AGATCGTAATGGCTAAACCCTAGAT 59.219 40.000 0.00 0.00 37.83 1.98
148 149 5.145564 AGATCGTAATGGCTAAACCCTAGA 58.854 41.667 0.00 0.00 37.83 2.43
149 150 5.470047 AGATCGTAATGGCTAAACCCTAG 57.530 43.478 0.00 0.00 37.83 3.02
150 151 4.022589 CGAGATCGTAATGGCTAAACCCTA 60.023 45.833 0.00 0.00 33.83 3.53
151 152 3.243771 CGAGATCGTAATGGCTAAACCCT 60.244 47.826 0.00 0.00 33.83 4.34
152 153 3.057734 CGAGATCGTAATGGCTAAACCC 58.942 50.000 0.00 0.00 33.83 4.11
153 154 3.973657 TCGAGATCGTAATGGCTAAACC 58.026 45.455 1.70 0.00 40.80 3.27
154 155 4.982916 ACATCGAGATCGTAATGGCTAAAC 59.017 41.667 1.70 0.00 40.80 2.01
155 156 5.196341 ACATCGAGATCGTAATGGCTAAA 57.804 39.130 1.70 0.00 40.80 1.85
156 157 4.848562 ACATCGAGATCGTAATGGCTAA 57.151 40.909 1.70 0.00 40.80 3.09
157 158 5.243207 TCTACATCGAGATCGTAATGGCTA 58.757 41.667 1.70 0.00 40.80 3.93
158 159 4.072839 TCTACATCGAGATCGTAATGGCT 58.927 43.478 1.70 0.00 40.80 4.75
159 160 4.421033 TCTACATCGAGATCGTAATGGC 57.579 45.455 1.70 0.00 40.80 4.40
168 169 6.707440 ACAAGAGTTGATCTACATCGAGAT 57.293 37.500 9.96 0.00 37.23 2.75
169 170 7.415318 GGTTACAAGAGTTGATCTACATCGAGA 60.415 40.741 9.96 0.00 37.23 4.04
170 171 6.693545 GGTTACAAGAGTTGATCTACATCGAG 59.306 42.308 9.96 5.46 37.23 4.04
171 172 6.377429 AGGTTACAAGAGTTGATCTACATCGA 59.623 38.462 9.96 0.00 37.23 3.59
172 173 6.565234 AGGTTACAAGAGTTGATCTACATCG 58.435 40.000 9.96 0.00 37.23 3.84
173 174 7.777095 AGAGGTTACAAGAGTTGATCTACATC 58.223 38.462 9.96 4.74 37.23 3.06
174 175 7.726033 AGAGGTTACAAGAGTTGATCTACAT 57.274 36.000 9.96 0.00 37.23 2.29
175 176 8.824756 ATAGAGGTTACAAGAGTTGATCTACA 57.175 34.615 9.96 0.00 37.23 2.74
178 179 9.127277 GAGTATAGAGGTTACAAGAGTTGATCT 57.873 37.037 0.00 0.00 41.27 2.75
179 180 8.904834 TGAGTATAGAGGTTACAAGAGTTGATC 58.095 37.037 0.00 0.00 0.00 2.92
180 181 8.824756 TGAGTATAGAGGTTACAAGAGTTGAT 57.175 34.615 0.00 0.00 0.00 2.57
181 182 8.824756 ATGAGTATAGAGGTTACAAGAGTTGA 57.175 34.615 0.00 0.00 0.00 3.18
182 183 8.687242 TGATGAGTATAGAGGTTACAAGAGTTG 58.313 37.037 0.00 0.00 0.00 3.16
183 184 8.824756 TGATGAGTATAGAGGTTACAAGAGTT 57.175 34.615 0.00 0.00 0.00 3.01
184 185 8.824756 TTGATGAGTATAGAGGTTACAAGAGT 57.175 34.615 0.00 0.00 0.00 3.24
185 186 9.743057 CTTTGATGAGTATAGAGGTTACAAGAG 57.257 37.037 0.00 0.00 0.00 2.85
186 187 9.256228 ACTTTGATGAGTATAGAGGTTACAAGA 57.744 33.333 0.00 0.00 0.00 3.02
187 188 9.522804 GACTTTGATGAGTATAGAGGTTACAAG 57.477 37.037 0.00 0.00 0.00 3.16
188 189 9.031537 TGACTTTGATGAGTATAGAGGTTACAA 57.968 33.333 0.00 0.00 0.00 2.41
189 190 8.589701 TGACTTTGATGAGTATAGAGGTTACA 57.410 34.615 0.00 0.00 0.00 2.41
192 193 8.762645 TGATTGACTTTGATGAGTATAGAGGTT 58.237 33.333 0.00 0.00 0.00 3.50
193 194 8.311395 TGATTGACTTTGATGAGTATAGAGGT 57.689 34.615 0.00 0.00 0.00 3.85
194 195 9.258826 CTTGATTGACTTTGATGAGTATAGAGG 57.741 37.037 0.00 0.00 0.00 3.69
195 196 8.763356 GCTTGATTGACTTTGATGAGTATAGAG 58.237 37.037 0.00 0.00 0.00 2.43
196 197 8.260114 TGCTTGATTGACTTTGATGAGTATAGA 58.740 33.333 0.00 0.00 0.00 1.98
197 198 8.429493 TGCTTGATTGACTTTGATGAGTATAG 57.571 34.615 0.00 0.00 0.00 1.31
198 199 7.496920 CCTGCTTGATTGACTTTGATGAGTATA 59.503 37.037 0.00 0.00 0.00 1.47
199 200 6.318144 CCTGCTTGATTGACTTTGATGAGTAT 59.682 38.462 0.00 0.00 0.00 2.12
200 201 5.645067 CCTGCTTGATTGACTTTGATGAGTA 59.355 40.000 0.00 0.00 0.00 2.59
201 202 4.458295 CCTGCTTGATTGACTTTGATGAGT 59.542 41.667 0.00 0.00 0.00 3.41
202 203 4.698780 TCCTGCTTGATTGACTTTGATGAG 59.301 41.667 0.00 0.00 0.00 2.90
203 204 4.654915 TCCTGCTTGATTGACTTTGATGA 58.345 39.130 0.00 0.00 0.00 2.92
204 205 5.048224 ACTTCCTGCTTGATTGACTTTGATG 60.048 40.000 0.00 0.00 0.00 3.07
205 206 5.075493 ACTTCCTGCTTGATTGACTTTGAT 58.925 37.500 0.00 0.00 0.00 2.57
206 207 4.464008 ACTTCCTGCTTGATTGACTTTGA 58.536 39.130 0.00 0.00 0.00 2.69
207 208 4.843220 ACTTCCTGCTTGATTGACTTTG 57.157 40.909 0.00 0.00 0.00 2.77
208 209 5.006386 CCTACTTCCTGCTTGATTGACTTT 58.994 41.667 0.00 0.00 0.00 2.66
209 210 4.287067 TCCTACTTCCTGCTTGATTGACTT 59.713 41.667 0.00 0.00 0.00 3.01
210 211 3.840666 TCCTACTTCCTGCTTGATTGACT 59.159 43.478 0.00 0.00 0.00 3.41
211 212 4.207891 TCCTACTTCCTGCTTGATTGAC 57.792 45.455 0.00 0.00 0.00 3.18
212 213 6.753913 ATATCCTACTTCCTGCTTGATTGA 57.246 37.500 0.00 0.00 0.00 2.57
213 214 7.389053 GGTAATATCCTACTTCCTGCTTGATTG 59.611 40.741 0.00 0.00 0.00 2.67
214 215 7.293535 AGGTAATATCCTACTTCCTGCTTGATT 59.706 37.037 0.00 0.00 35.87 2.57
215 216 6.789959 AGGTAATATCCTACTTCCTGCTTGAT 59.210 38.462 0.00 0.00 35.87 2.57
216 217 6.143915 AGGTAATATCCTACTTCCTGCTTGA 58.856 40.000 0.00 0.00 35.87 3.02
217 218 6.426646 AGGTAATATCCTACTTCCTGCTTG 57.573 41.667 0.00 0.00 35.87 4.01
218 219 5.544562 GGAGGTAATATCCTACTTCCTGCTT 59.455 44.000 7.98 0.00 42.18 3.91
219 220 5.088026 GGAGGTAATATCCTACTTCCTGCT 58.912 45.833 7.98 0.00 42.18 4.24
220 221 4.838986 TGGAGGTAATATCCTACTTCCTGC 59.161 45.833 13.84 0.00 44.50 4.85
221 222 7.560796 AATGGAGGTAATATCCTACTTCCTG 57.439 40.000 13.84 0.00 44.50 3.86
222 223 9.327731 CTTAATGGAGGTAATATCCTACTTCCT 57.672 37.037 13.84 1.96 44.50 3.36
223 224 9.322769 TCTTAATGGAGGTAATATCCTACTTCC 57.677 37.037 8.22 8.22 44.47 3.46
225 226 9.327731 CCTCTTAATGGAGGTAATATCCTACTT 57.672 37.037 3.13 0.00 45.65 2.24
226 227 8.903059 CCTCTTAATGGAGGTAATATCCTACT 57.097 38.462 3.13 0.00 45.65 2.57
239 240 3.532542 GGTTCGAACCCTCTTAATGGAG 58.467 50.000 33.02 0.00 43.43 3.86
240 241 3.622166 GGTTCGAACCCTCTTAATGGA 57.378 47.619 33.02 0.00 43.43 3.41
252 253 5.403466 ACACGATGTTTAACTAGGTTCGAAC 59.597 40.000 20.14 20.14 0.00 3.95
253 254 5.531634 ACACGATGTTTAACTAGGTTCGAA 58.468 37.500 5.85 0.00 0.00 3.71
254 255 5.125100 ACACGATGTTTAACTAGGTTCGA 57.875 39.130 5.85 0.00 0.00 3.71
255 256 4.325472 GGACACGATGTTTAACTAGGTTCG 59.675 45.833 0.00 0.00 0.00 3.95
256 257 4.628766 GGGACACGATGTTTAACTAGGTTC 59.371 45.833 0.00 0.00 0.00 3.62
257 258 4.564199 GGGGACACGATGTTTAACTAGGTT 60.564 45.833 0.00 0.00 0.00 3.50
258 259 3.055602 GGGGACACGATGTTTAACTAGGT 60.056 47.826 0.00 0.00 0.00 3.08
259 260 3.528532 GGGGACACGATGTTTAACTAGG 58.471 50.000 0.00 0.00 0.00 3.02
260 261 3.528532 GGGGGACACGATGTTTAACTAG 58.471 50.000 0.00 0.00 0.00 2.57
261 262 2.094078 CGGGGGACACGATGTTTAACTA 60.094 50.000 0.00 0.00 0.00 2.24
262 263 1.338389 CGGGGGACACGATGTTTAACT 60.338 52.381 0.00 0.00 0.00 2.24
263 264 1.081094 CGGGGGACACGATGTTTAAC 58.919 55.000 0.00 0.00 0.00 2.01
264 265 0.674269 GCGGGGGACACGATGTTTAA 60.674 55.000 0.00 0.00 0.00 1.52
265 266 1.078988 GCGGGGGACACGATGTTTA 60.079 57.895 0.00 0.00 0.00 2.01
266 267 2.359478 GCGGGGGACACGATGTTT 60.359 61.111 0.00 0.00 0.00 2.83
267 268 4.404098 GGCGGGGGACACGATGTT 62.404 66.667 0.00 0.00 0.00 2.71
269 270 4.530857 GAGGCGGGGGACACGATG 62.531 72.222 0.00 0.00 0.00 3.84
273 274 0.761702 TAATAGGAGGCGGGGGACAC 60.762 60.000 0.00 0.00 0.00 3.67
274 275 0.761702 GTAATAGGAGGCGGGGGACA 60.762 60.000 0.00 0.00 0.00 4.02
275 276 1.478526 GGTAATAGGAGGCGGGGGAC 61.479 65.000 0.00 0.00 0.00 4.46
276 277 1.152183 GGTAATAGGAGGCGGGGGA 60.152 63.158 0.00 0.00 0.00 4.81
277 278 0.767060 AAGGTAATAGGAGGCGGGGG 60.767 60.000 0.00 0.00 0.00 5.40
278 279 0.685660 GAAGGTAATAGGAGGCGGGG 59.314 60.000 0.00 0.00 0.00 5.73
279 280 0.317479 CGAAGGTAATAGGAGGCGGG 59.683 60.000 0.00 0.00 0.00 6.13
280 281 1.325355 TCGAAGGTAATAGGAGGCGG 58.675 55.000 0.00 0.00 0.00 6.13
281 282 3.757493 AGTATCGAAGGTAATAGGAGGCG 59.243 47.826 0.00 0.00 0.00 5.52
282 283 4.765856 TGAGTATCGAAGGTAATAGGAGGC 59.234 45.833 0.00 0.00 38.61 4.70
283 284 6.149807 GTCTGAGTATCGAAGGTAATAGGAGG 59.850 46.154 0.00 0.00 38.61 4.30
284 285 6.128499 CGTCTGAGTATCGAAGGTAATAGGAG 60.128 46.154 0.00 0.00 38.61 3.69
285 286 5.699915 CGTCTGAGTATCGAAGGTAATAGGA 59.300 44.000 0.00 0.00 38.61 2.94
286 287 5.617308 GCGTCTGAGTATCGAAGGTAATAGG 60.617 48.000 0.00 0.00 38.61 2.57
287 288 5.049612 TGCGTCTGAGTATCGAAGGTAATAG 60.050 44.000 0.00 0.00 38.61 1.73
288 289 4.818005 TGCGTCTGAGTATCGAAGGTAATA 59.182 41.667 0.00 0.00 38.61 0.98
289 290 3.630769 TGCGTCTGAGTATCGAAGGTAAT 59.369 43.478 0.00 0.00 38.61 1.89
290 291 3.011818 TGCGTCTGAGTATCGAAGGTAA 58.988 45.455 0.00 0.00 38.61 2.85
291 292 2.353889 GTGCGTCTGAGTATCGAAGGTA 59.646 50.000 0.00 0.00 38.61 3.08
292 293 1.132643 GTGCGTCTGAGTATCGAAGGT 59.867 52.381 0.00 0.00 38.61 3.50
293 294 1.132453 TGTGCGTCTGAGTATCGAAGG 59.868 52.381 0.00 0.00 38.61 3.46
294 295 2.159503 ACTGTGCGTCTGAGTATCGAAG 60.160 50.000 0.00 0.00 38.61 3.79
295 296 1.810755 ACTGTGCGTCTGAGTATCGAA 59.189 47.619 0.00 0.00 38.61 3.71
296 297 1.450025 ACTGTGCGTCTGAGTATCGA 58.550 50.000 0.00 0.00 38.61 3.59
297 298 2.177977 GAACTGTGCGTCTGAGTATCG 58.822 52.381 0.00 0.00 38.61 2.92
298 299 2.177977 CGAACTGTGCGTCTGAGTATC 58.822 52.381 0.00 0.00 0.00 2.24
299 300 1.135373 CCGAACTGTGCGTCTGAGTAT 60.135 52.381 7.51 0.00 0.00 2.12
300 301 0.240145 CCGAACTGTGCGTCTGAGTA 59.760 55.000 7.51 0.00 0.00 2.59
301 302 1.007271 CCGAACTGTGCGTCTGAGT 60.007 57.895 7.51 0.00 0.00 3.41
302 303 1.734477 CCCGAACTGTGCGTCTGAG 60.734 63.158 7.51 0.00 0.00 3.35
303 304 2.197605 TCCCGAACTGTGCGTCTGA 61.198 57.895 7.51 0.00 0.00 3.27
304 305 2.022129 GTCCCGAACTGTGCGTCTG 61.022 63.158 7.51 0.00 0.00 3.51
305 306 2.338984 GTCCCGAACTGTGCGTCT 59.661 61.111 7.51 0.00 0.00 4.18
306 307 2.737376 GGTCCCGAACTGTGCGTC 60.737 66.667 7.51 0.00 0.00 5.19
307 308 4.309950 GGGTCCCGAACTGTGCGT 62.310 66.667 7.51 0.00 0.00 5.24
309 310 4.717313 GGGGGTCCCGAACTGTGC 62.717 72.222 0.48 0.00 36.85 4.57
318 319 3.097429 ATCTCGGGTAGGGGGTCCC 62.097 68.421 0.00 0.00 45.90 4.46
319 320 1.533513 GATCTCGGGTAGGGGGTCC 60.534 68.421 0.00 0.00 0.00 4.46
320 321 1.902432 CGATCTCGGGTAGGGGGTC 60.902 68.421 0.00 0.00 35.37 4.46
321 322 2.197875 CGATCTCGGGTAGGGGGT 59.802 66.667 0.00 0.00 35.37 4.95
331 332 1.447140 TCAAAACCGGCCGATCTCG 60.447 57.895 30.73 12.43 39.44 4.04
332 333 0.672401 TGTCAAAACCGGCCGATCTC 60.672 55.000 30.73 10.48 0.00 2.75
333 334 0.953960 GTGTCAAAACCGGCCGATCT 60.954 55.000 30.73 7.34 0.00 2.75
334 335 1.500396 GTGTCAAAACCGGCCGATC 59.500 57.895 30.73 8.82 0.00 3.69
335 336 1.969589 GGTGTCAAAACCGGCCGAT 60.970 57.895 30.73 6.36 0.00 4.18
336 337 2.592287 GGTGTCAAAACCGGCCGA 60.592 61.111 30.73 0.90 0.00 5.54
342 343 0.818040 AGGCTGTCGGTGTCAAAACC 60.818 55.000 0.00 0.00 36.82 3.27
343 344 1.529865 GTAGGCTGTCGGTGTCAAAAC 59.470 52.381 0.00 0.00 0.00 2.43
344 345 1.870580 CGTAGGCTGTCGGTGTCAAAA 60.871 52.381 0.00 0.00 0.00 2.44
345 346 0.319211 CGTAGGCTGTCGGTGTCAAA 60.319 55.000 0.00 0.00 0.00 2.69
346 347 1.174078 TCGTAGGCTGTCGGTGTCAA 61.174 55.000 12.40 0.00 0.00 3.18
347 348 0.963856 ATCGTAGGCTGTCGGTGTCA 60.964 55.000 12.40 0.00 0.00 3.58
348 349 0.172803 AATCGTAGGCTGTCGGTGTC 59.827 55.000 12.40 0.00 0.00 3.67
349 350 1.466856 TAATCGTAGGCTGTCGGTGT 58.533 50.000 12.40 3.40 0.00 4.16
350 351 2.572191 TTAATCGTAGGCTGTCGGTG 57.428 50.000 12.40 0.00 0.00 4.94
351 352 3.814005 ATTTAATCGTAGGCTGTCGGT 57.186 42.857 12.40 4.34 0.00 4.69
352 353 5.333111 GCTTTATTTAATCGTAGGCTGTCGG 60.333 44.000 12.40 0.00 0.00 4.79
353 354 5.609696 CGCTTTATTTAATCGTAGGCTGTCG 60.610 44.000 0.00 2.05 0.00 4.35
354 355 5.333111 CCGCTTTATTTAATCGTAGGCTGTC 60.333 44.000 0.00 0.00 0.00 3.51
355 356 4.510340 CCGCTTTATTTAATCGTAGGCTGT 59.490 41.667 0.00 0.00 0.00 4.40
356 357 4.610680 GCCGCTTTATTTAATCGTAGGCTG 60.611 45.833 0.00 0.00 37.97 4.85
357 358 3.497262 GCCGCTTTATTTAATCGTAGGCT 59.503 43.478 0.00 0.00 37.97 4.58
358 359 3.249080 TGCCGCTTTATTTAATCGTAGGC 59.751 43.478 0.00 0.00 41.04 3.93
359 360 5.412526 TTGCCGCTTTATTTAATCGTAGG 57.587 39.130 0.00 0.00 0.00 3.18
360 361 9.051027 CAATATTGCCGCTTTATTTAATCGTAG 57.949 33.333 1.74 0.00 0.00 3.51
361 362 8.775527 TCAATATTGCCGCTTTATTTAATCGTA 58.224 29.630 10.76 0.00 0.00 3.43
362 363 7.644490 TCAATATTGCCGCTTTATTTAATCGT 58.356 30.769 10.76 0.00 0.00 3.73
363 364 8.500837 TTCAATATTGCCGCTTTATTTAATCG 57.499 30.769 10.76 0.00 0.00 3.34
404 405 0.860457 AGGGGAAGCTGGGAGTTTTT 59.140 50.000 0.00 0.00 0.00 1.94
405 406 0.405973 GAGGGGAAGCTGGGAGTTTT 59.594 55.000 0.00 0.00 0.00 2.43
406 407 0.772124 TGAGGGGAAGCTGGGAGTTT 60.772 55.000 0.00 0.00 0.00 2.66
407 408 0.772124 TTGAGGGGAAGCTGGGAGTT 60.772 55.000 0.00 0.00 0.00 3.01
408 409 0.772124 TTTGAGGGGAAGCTGGGAGT 60.772 55.000 0.00 0.00 0.00 3.85
409 410 0.405585 TTTTGAGGGGAAGCTGGGAG 59.594 55.000 0.00 0.00 0.00 4.30
410 411 0.856982 TTTTTGAGGGGAAGCTGGGA 59.143 50.000 0.00 0.00 0.00 4.37
411 412 3.455737 TTTTTGAGGGGAAGCTGGG 57.544 52.632 0.00 0.00 0.00 4.45
431 432 9.758651 GGGAAAAGCTGAGAGTTTTTATTTTTA 57.241 29.630 0.00 0.00 38.46 1.52
432 433 8.264347 TGGGAAAAGCTGAGAGTTTTTATTTTT 58.736 29.630 0.00 0.00 38.46 1.94
433 434 7.791029 TGGGAAAAGCTGAGAGTTTTTATTTT 58.209 30.769 0.00 0.00 38.46 1.82
434 435 7.360113 TGGGAAAAGCTGAGAGTTTTTATTT 57.640 32.000 0.00 0.00 38.46 1.40
435 436 6.976934 TGGGAAAAGCTGAGAGTTTTTATT 57.023 33.333 0.00 0.00 38.46 1.40
436 437 6.517362 GCTTGGGAAAAGCTGAGAGTTTTTAT 60.517 38.462 2.87 0.00 38.46 1.40
437 438 5.221244 GCTTGGGAAAAGCTGAGAGTTTTTA 60.221 40.000 2.87 0.00 38.46 1.52
438 439 4.442052 GCTTGGGAAAAGCTGAGAGTTTTT 60.442 41.667 2.87 0.00 40.52 1.94
439 440 3.068732 GCTTGGGAAAAGCTGAGAGTTTT 59.931 43.478 2.87 0.00 40.01 2.43
440 441 2.625314 GCTTGGGAAAAGCTGAGAGTTT 59.375 45.455 2.87 0.00 40.01 2.66
441 442 2.234143 GCTTGGGAAAAGCTGAGAGTT 58.766 47.619 2.87 0.00 40.01 3.01
442 443 1.546548 GGCTTGGGAAAAGCTGAGAGT 60.547 52.381 9.70 0.00 42.62 3.24
443 444 1.172175 GGCTTGGGAAAAGCTGAGAG 58.828 55.000 9.70 0.00 42.62 3.20
451 452 2.915137 GGCACGGGCTTGGGAAAA 60.915 61.111 10.74 0.00 40.87 2.29
475 476 9.060347 CCTGTGTGCAGATTTTATATAGTTGAT 57.940 33.333 0.00 0.00 45.28 2.57
476 477 8.046708 ACCTGTGTGCAGATTTTATATAGTTGA 58.953 33.333 0.00 0.00 45.28 3.18
477 478 8.124823 CACCTGTGTGCAGATTTTATATAGTTG 58.875 37.037 0.00 0.00 45.28 3.16
478 479 8.213518 CACCTGTGTGCAGATTTTATATAGTT 57.786 34.615 0.00 0.00 45.28 2.24
479 480 7.792374 CACCTGTGTGCAGATTTTATATAGT 57.208 36.000 0.00 0.00 45.28 2.12
494 498 1.009675 GTCGCTTTGCACCTGTGTG 60.010 57.895 0.00 0.00 45.65 3.82
495 499 2.186826 GGTCGCTTTGCACCTGTGT 61.187 57.895 0.00 0.00 30.89 3.72
498 502 1.234821 TTAAGGTCGCTTTGCACCTG 58.765 50.000 12.03 0.00 38.99 4.00
500 504 2.488153 AGATTTAAGGTCGCTTTGCACC 59.512 45.455 0.00 0.00 32.66 5.01
509 513 5.897377 ATCCAAACCAAGATTTAAGGTCG 57.103 39.130 0.00 0.00 33.74 4.79
511 515 6.081356 TCCAATCCAAACCAAGATTTAAGGT 58.919 36.000 0.00 0.00 37.20 3.50
518 522 3.077391 TCCCTTCCAATCCAAACCAAGAT 59.923 43.478 0.00 0.00 0.00 2.40
589 599 5.587043 TGCAAGTATTATTAAACGGGTGAGG 59.413 40.000 0.00 0.00 0.00 3.86
600 610 5.126779 TGATTGGCGGTGCAAGTATTATTA 58.873 37.500 0.00 0.00 0.00 0.98
601 611 3.951037 TGATTGGCGGTGCAAGTATTATT 59.049 39.130 0.00 0.00 0.00 1.40
602 612 3.550820 TGATTGGCGGTGCAAGTATTAT 58.449 40.909 0.00 0.00 0.00 1.28
704 719 3.311110 TGGAGGTGGACGTGGAGC 61.311 66.667 0.00 0.00 0.00 4.70
706 721 2.920912 GGTGGAGGTGGACGTGGA 60.921 66.667 0.00 0.00 0.00 4.02
841 877 4.256180 GGATTCGCGGCCAGGGAT 62.256 66.667 6.13 0.00 41.64 3.85
844 880 4.794648 TTGGGATTCGCGGCCAGG 62.795 66.667 6.13 0.00 0.00 4.45
845 881 3.204827 CTTGGGATTCGCGGCCAG 61.205 66.667 6.13 0.00 0.00 4.85
848 884 0.456142 GTTTTCTTGGGATTCGCGGC 60.456 55.000 6.13 0.00 0.00 6.53
865 901 1.842381 CTGGGCCGGAAGAAGGAGTT 61.842 60.000 6.48 0.00 0.00 3.01
868 904 3.717294 GCTGGGCCGGAAGAAGGA 61.717 66.667 18.84 0.00 0.00 3.36
869 905 4.803908 GGCTGGGCCGGAAGAAGG 62.804 72.222 18.84 0.00 39.62 3.46
905 941 3.914094 TGCTGATGCAGTGATGCC 58.086 55.556 0.00 0.00 45.31 4.40
984 1020 2.046314 ATGGCGCCACACCACTAC 60.046 61.111 35.50 0.00 40.82 2.73
985 1021 2.046411 CATGGCGCCACACCACTA 60.046 61.111 35.50 6.20 40.82 2.74
1285 1324 2.047465 CGCAGAGAAGCTGGCAGT 60.047 61.111 17.16 0.00 45.03 4.40
1287 1326 2.357881 CACGCAGAGAAGCTGGCA 60.358 61.111 0.00 0.00 45.03 4.92
1294 1333 2.108157 ACGGCAACACGCAGAGAA 59.892 55.556 0.00 0.00 45.17 2.87
1296 1335 2.029288 ATCACGGCAACACGCAGAG 61.029 57.895 0.00 0.00 45.17 3.35
1297 1336 2.030412 ATCACGGCAACACGCAGA 59.970 55.556 0.00 0.00 45.17 4.26
1298 1337 2.174107 CATCACGGCAACACGCAG 59.826 61.111 0.00 0.00 45.17 5.18
1317 1356 1.372128 GCAACCAAGAAGGCGCAAG 60.372 57.895 10.83 0.00 43.14 4.01
1321 1365 0.519077 GAAGAGCAACCAAGAAGGCG 59.481 55.000 0.00 0.00 43.14 5.52
1332 1376 1.512926 GCTTGAACCGAGAAGAGCAA 58.487 50.000 0.00 0.00 0.00 3.91
1334 1378 1.355066 CCGCTTGAACCGAGAAGAGC 61.355 60.000 0.00 0.00 0.00 4.09
1356 1400 2.813908 CGCCTCTACCACCAACGC 60.814 66.667 0.00 0.00 0.00 4.84
1357 1401 2.813908 GCGCCTCTACCACCAACG 60.814 66.667 0.00 0.00 0.00 4.10
1359 1403 3.712907 GGGCGCCTCTACCACCAA 61.713 66.667 28.56 0.00 0.00 3.67
1374 1428 2.544267 GCGATTCGAGAACTAAATGGGG 59.456 50.000 10.88 0.00 0.00 4.96
1376 1430 3.194861 TGGCGATTCGAGAACTAAATGG 58.805 45.455 10.88 0.00 0.00 3.16
1388 1442 1.725931 GCAAGAACAGTTGGCGATTCG 60.726 52.381 0.62 0.62 0.00 3.34
1391 1445 2.257353 GGCAAGAACAGTTGGCGAT 58.743 52.632 0.00 0.00 42.40 4.58
1397 1451 0.535102 CTCCCACGGCAAGAACAGTT 60.535 55.000 0.00 0.00 0.00 3.16
1413 1470 4.400961 AGCGGCTGCAGGAACTCC 62.401 66.667 21.93 6.54 46.23 3.85
1461 1522 4.148825 CTTCTGCCTACCGCCGCT 62.149 66.667 0.00 0.00 36.24 5.52
1466 1527 2.420568 TACCGCCTTCTGCCTACCG 61.421 63.158 0.00 0.00 36.24 4.02
1467 1528 1.143401 GTACCGCCTTCTGCCTACC 59.857 63.158 0.00 0.00 36.24 3.18
1468 1529 1.226888 CGTACCGCCTTCTGCCTAC 60.227 63.158 0.00 0.00 36.24 3.18
1469 1530 1.378911 TCGTACCGCCTTCTGCCTA 60.379 57.895 0.00 0.00 36.24 3.93
1470 1531 2.678934 TCGTACCGCCTTCTGCCT 60.679 61.111 0.00 0.00 36.24 4.75
1472 1533 0.248539 CTAGTCGTACCGCCTTCTGC 60.249 60.000 0.00 0.00 0.00 4.26
1473 1534 0.248539 GCTAGTCGTACCGCCTTCTG 60.249 60.000 0.00 0.00 0.00 3.02
1474 1535 0.679002 TGCTAGTCGTACCGCCTTCT 60.679 55.000 0.00 0.00 0.00 2.85
1476 1537 0.172803 CTTGCTAGTCGTACCGCCTT 59.827 55.000 0.00 0.00 0.00 4.35
1479 1540 1.859197 GCTACTTGCTAGTCGTACCGC 60.859 57.143 3.45 0.00 38.95 5.68
1480 1541 1.399440 TGCTACTTGCTAGTCGTACCG 59.601 52.381 3.45 0.00 43.37 4.02
1481 1542 3.177487 GTTGCTACTTGCTAGTCGTACC 58.823 50.000 3.45 0.00 43.37 3.34
1508 1569 5.874810 TGAACATTACTGCAGGTAAAGCTAG 59.125 40.000 19.93 0.38 42.74 3.42
1509 1570 5.800296 TGAACATTACTGCAGGTAAAGCTA 58.200 37.500 19.93 0.00 42.74 3.32
1510 1571 4.651778 TGAACATTACTGCAGGTAAAGCT 58.348 39.130 19.93 3.19 42.74 3.74
1511 1572 5.567138 ATGAACATTACTGCAGGTAAAGC 57.433 39.130 19.93 2.25 42.74 3.51
1512 1573 7.119699 TCTGAATGAACATTACTGCAGGTAAAG 59.880 37.037 19.93 12.87 42.74 1.85
1513 1574 6.939730 TCTGAATGAACATTACTGCAGGTAAA 59.060 34.615 19.93 9.71 42.74 2.01
1514 1575 6.472016 TCTGAATGAACATTACTGCAGGTAA 58.528 36.000 19.93 13.98 43.49 2.85
1515 1576 6.048732 TCTGAATGAACATTACTGCAGGTA 57.951 37.500 19.93 5.50 0.00 3.08
1516 1577 4.910195 TCTGAATGAACATTACTGCAGGT 58.090 39.130 19.93 2.70 0.00 4.00
1517 1578 5.885230 TTCTGAATGAACATTACTGCAGG 57.115 39.130 19.93 1.96 0.00 4.85
1518 1579 7.280428 AGAGATTCTGAATGAACATTACTGCAG 59.720 37.037 13.48 13.48 37.52 4.41
1531 1592 3.493877 GCGACCATGAGAGATTCTGAATG 59.506 47.826 7.78 0.00 0.00 2.67
1539 1607 0.316522 CGATGGCGACCATGAGAGAT 59.683 55.000 14.84 0.00 45.26 2.75
1567 1635 3.181445 GCACCACCAATGATCATACCCTA 60.181 47.826 9.04 0.00 0.00 3.53
1571 1644 3.489738 GCAAGCACCACCAATGATCATAC 60.490 47.826 9.04 0.00 0.00 2.39
1579 1652 0.249996 GCAAAGCAAGCACCACCAAT 60.250 50.000 0.00 0.00 0.00 3.16
1580 1653 1.143620 GCAAAGCAAGCACCACCAA 59.856 52.632 0.00 0.00 0.00 3.67
1581 1654 1.329171 AAGCAAAGCAAGCACCACCA 61.329 50.000 0.00 0.00 0.00 4.17
1586 1664 0.386838 ACCAGAAGCAAAGCAAGCAC 59.613 50.000 0.00 0.00 0.00 4.40
1594 1672 1.211703 TGGACAGTGACCAGAAGCAAA 59.788 47.619 10.44 0.00 33.22 3.68
1595 1673 0.836606 TGGACAGTGACCAGAAGCAA 59.163 50.000 10.44 0.00 33.22 3.91
1596 1674 0.106708 GTGGACAGTGACCAGAAGCA 59.893 55.000 14.89 0.00 38.14 3.91
1597 1675 0.106708 TGTGGACAGTGACCAGAAGC 59.893 55.000 14.89 3.95 38.14 3.86
1598 1676 2.160822 CTGTGGACAGTGACCAGAAG 57.839 55.000 14.89 11.45 39.09 2.85
1614 1692 1.067516 GAAGCATGCACCACAAACTGT 59.932 47.619 21.98 0.00 0.00 3.55
1615 1693 1.338973 AGAAGCATGCACCACAAACTG 59.661 47.619 21.98 0.00 0.00 3.16
1616 1694 1.338973 CAGAAGCATGCACCACAAACT 59.661 47.619 21.98 4.03 0.00 2.66
1617 1695 1.603678 CCAGAAGCATGCACCACAAAC 60.604 52.381 21.98 1.73 0.00 2.93
1619 1697 0.467844 ACCAGAAGCATGCACCACAA 60.468 50.000 21.98 0.00 0.00 3.33
1620 1698 0.890542 GACCAGAAGCATGCACCACA 60.891 55.000 21.98 0.00 0.00 4.17
1621 1699 0.890542 TGACCAGAAGCATGCACCAC 60.891 55.000 21.98 7.84 0.00 4.16
1622 1700 0.890542 GTGACCAGAAGCATGCACCA 60.891 55.000 21.98 4.20 0.00 4.17
1623 1701 1.589716 GGTGACCAGAAGCATGCACC 61.590 60.000 21.98 12.13 38.98 5.01
1624 1702 1.878775 GGTGACCAGAAGCATGCAC 59.121 57.895 21.98 13.47 0.00 4.57
1625 1703 1.672030 CGGTGACCAGAAGCATGCA 60.672 57.895 21.98 0.00 0.00 3.96
1626 1704 0.955428 TTCGGTGACCAGAAGCATGC 60.955 55.000 10.51 10.51 0.00 4.06
1627 1705 1.742761 ATTCGGTGACCAGAAGCATG 58.257 50.000 1.11 0.00 0.00 4.06
1628 1706 2.086869 CAATTCGGTGACCAGAAGCAT 58.913 47.619 1.11 0.00 0.00 3.79
1629 1707 1.522668 CAATTCGGTGACCAGAAGCA 58.477 50.000 1.11 0.00 0.00 3.91
1630 1708 0.169009 GCAATTCGGTGACCAGAAGC 59.831 55.000 1.11 3.90 0.00 3.86
1631 1709 1.522668 TGCAATTCGGTGACCAGAAG 58.477 50.000 1.11 0.00 0.00 2.85
1632 1710 2.083774 GATGCAATTCGGTGACCAGAA 58.916 47.619 1.11 6.89 0.00 3.02
1637 1715 2.549633 CAAGGATGCAATTCGGTGAC 57.450 50.000 0.00 0.00 0.00 3.67
1649 1727 6.090783 CGAATTGGATTATGATGCAAGGATG 58.909 40.000 10.11 0.00 45.08 3.51
1650 1728 5.336213 GCGAATTGGATTATGATGCAAGGAT 60.336 40.000 10.11 0.00 45.08 3.24
1651 1729 4.022935 GCGAATTGGATTATGATGCAAGGA 60.023 41.667 10.11 0.00 45.08 3.36
1652 1730 4.232221 GCGAATTGGATTATGATGCAAGG 58.768 43.478 10.11 3.89 45.08 3.61
1653 1731 4.232221 GGCGAATTGGATTATGATGCAAG 58.768 43.478 10.11 0.00 45.08 4.01
1655 1733 2.557924 GGGCGAATTGGATTATGATGCA 59.442 45.455 0.00 0.00 0.00 3.96
1656 1734 2.094545 GGGGCGAATTGGATTATGATGC 60.095 50.000 0.00 0.00 0.00 3.91
1657 1735 2.162208 CGGGGCGAATTGGATTATGATG 59.838 50.000 0.00 0.00 0.00 3.07
1658 1736 2.224769 ACGGGGCGAATTGGATTATGAT 60.225 45.455 0.00 0.00 0.00 2.45
1659 1737 1.142060 ACGGGGCGAATTGGATTATGA 59.858 47.619 0.00 0.00 0.00 2.15
1660 1738 1.535462 GACGGGGCGAATTGGATTATG 59.465 52.381 0.00 0.00 0.00 1.90
1661 1739 1.142060 TGACGGGGCGAATTGGATTAT 59.858 47.619 0.00 0.00 0.00 1.28
1662 1740 0.542333 TGACGGGGCGAATTGGATTA 59.458 50.000 0.00 0.00 0.00 1.75
1663 1741 1.029947 GTGACGGGGCGAATTGGATT 61.030 55.000 0.00 0.00 0.00 3.01
1664 1742 1.451387 GTGACGGGGCGAATTGGAT 60.451 57.895 0.00 0.00 0.00 3.41
1665 1743 2.046700 GTGACGGGGCGAATTGGA 60.047 61.111 0.00 0.00 0.00 3.53
1666 1744 2.359354 TGTGACGGGGCGAATTGG 60.359 61.111 0.00 0.00 0.00 3.16
1669 1747 0.389391 CTATCTGTGACGGGGCGAAT 59.611 55.000 0.00 0.00 0.00 3.34
1671 1749 2.782222 GCTATCTGTGACGGGGCGA 61.782 63.158 0.00 0.00 0.00 5.54
1674 1752 2.332063 AAATGCTATCTGTGACGGGG 57.668 50.000 0.00 0.00 0.00 5.73
1702 1804 1.415374 GCACAATGTTGAGCAAGCAG 58.585 50.000 9.73 0.00 43.01 4.24
1715 1817 1.787847 GTAAGTCTGCGCGCACAAT 59.212 52.632 33.09 18.41 0.00 2.71
1716 1818 2.653967 CGTAAGTCTGCGCGCACAA 61.654 57.895 33.09 19.08 0.00 3.33
1717 1819 3.103289 CGTAAGTCTGCGCGCACA 61.103 61.111 33.09 19.62 0.00 4.57
1718 1820 2.803670 TCGTAAGTCTGCGCGCAC 60.804 61.111 33.09 22.33 39.48 5.34
1719 1821 2.803670 GTCGTAAGTCTGCGCGCA 60.804 61.111 34.12 34.12 39.48 6.09
1720 1822 3.887327 CGTCGTAAGTCTGCGCGC 61.887 66.667 27.26 27.26 39.48 6.86
1721 1823 2.202260 TCGTCGTAAGTCTGCGCG 60.202 61.111 0.00 0.00 39.48 6.86
1723 1825 0.247735 CTCCTCGTCGTAAGTCTGCG 60.248 60.000 0.00 0.00 39.48 5.18
1757 1860 0.247736 AGATGTCGTTGAGTCCAGCC 59.752 55.000 0.00 0.00 0.00 4.85
2015 2130 0.536006 GCACCTTGAACTCTGCCACT 60.536 55.000 0.00 0.00 0.00 4.00
2017 2141 4.481195 GCACCTTGAACTCTGCCA 57.519 55.556 0.00 0.00 0.00 4.92
2020 2144 0.951040 GGACGGCACCTTGAACTCTG 60.951 60.000 0.00 0.00 0.00 3.35
2099 2223 0.249238 CGAGGAATCTCAGGGCTTCG 60.249 60.000 0.00 0.00 39.95 3.79
2105 2229 1.227497 GCTGCCGAGGAATCTCAGG 60.227 63.158 0.00 0.00 39.95 3.86
2109 2233 2.188994 GCTGCTGCCGAGGAATCT 59.811 61.111 3.85 0.00 0.00 2.40
2111 2235 2.042831 GTTGCTGCTGCCGAGGAAT 61.043 57.895 13.47 0.00 38.71 3.01
2128 2252 1.296715 GACGAGAATGGCACCCTGT 59.703 57.895 0.00 0.00 0.00 4.00
2130 2254 1.903877 CTGGACGAGAATGGCACCCT 61.904 60.000 0.00 0.00 0.00 4.34
2132 2256 2.109126 GCTGGACGAGAATGGCACC 61.109 63.158 0.00 0.00 0.00 5.01
2790 2917 4.614475 TGGTAGAGAGTCTGGTTCATGAT 58.386 43.478 0.00 0.00 0.00 2.45
2804 2931 3.345414 GTTCTCGAAGTCCTGGTAGAGA 58.655 50.000 0.00 0.00 33.53 3.10
2807 2934 1.477295 GGGTTCTCGAAGTCCTGGTAG 59.523 57.143 0.00 0.00 0.00 3.18
3196 3323 1.080354 ACCCTCAACGGATCCTGGA 59.920 57.895 10.75 0.00 33.16 3.86
3307 3443 8.846943 AGTTACACATAATGAACATGACAGAA 57.153 30.769 0.00 0.00 0.00 3.02
3407 3543 9.208022 CTACTCTGAATTTACTGACAAACATGA 57.792 33.333 0.00 0.00 0.00 3.07
3408 3544 8.446273 CCTACTCTGAATTTACTGACAAACATG 58.554 37.037 0.00 0.00 0.00 3.21
3505 3641 9.803315 TTGTGATACATACATAGTCTTTGACTC 57.197 33.333 3.30 0.00 42.40 3.36
3506 3642 9.587772 GTTGTGATACATACATAGTCTTTGACT 57.412 33.333 5.53 5.53 45.54 3.41
3507 3643 9.366216 TGTTGTGATACATACATAGTCTTTGAC 57.634 33.333 0.00 0.00 0.00 3.18
3512 3648 9.702494 CATCATGTTGTGATACATACATAGTCT 57.298 33.333 0.00 0.00 45.76 3.24
3513 3649 9.481340 ACATCATGTTGTGATACATACATAGTC 57.519 33.333 8.62 0.00 45.76 2.59
3594 3734 7.670140 TCCTAGAGAAGTAGTGTTCAGATTTCA 59.330 37.037 0.00 0.00 0.00 2.69
3634 3774 5.444744 TCTTCTCTAGTTCTCTAGGCAGT 57.555 43.478 3.02 0.00 42.66 4.40
3675 3815 0.394899 GACCCCAGCTTTCCTGATGG 60.395 60.000 0.00 0.00 44.64 3.51
3690 3834 3.694566 GGATACAAACACAATGAGGACCC 59.305 47.826 0.00 0.00 0.00 4.46
3715 3859 8.975410 TTTATTGACTCAAAATGAAGCATCAG 57.025 30.769 0.00 0.00 39.39 2.90
3830 3974 3.678965 AGAGTAGATGCTGAGGAAGGA 57.321 47.619 0.00 0.00 0.00 3.36
3831 3975 4.832266 ACATAGAGTAGATGCTGAGGAAGG 59.168 45.833 0.00 0.00 0.00 3.46
3835 3979 5.278907 CCTGAACATAGAGTAGATGCTGAGG 60.279 48.000 0.00 0.00 0.00 3.86
3896 4040 3.976701 AATGCCCTTCCCGCTGTCG 62.977 63.158 0.00 0.00 0.00 4.35
4052 4196 4.218578 ATCTCCAGCTCAGGCGCG 62.219 66.667 0.00 0.00 44.37 6.86
4114 4258 1.251251 GAAAGTGGCATCCAAGCTGT 58.749 50.000 0.00 0.00 34.18 4.40
4118 4262 1.508088 GGCGAAAGTGGCATCCAAG 59.492 57.895 0.00 0.00 34.18 3.61
4124 4268 4.572571 AACCGGGCGAAAGTGGCA 62.573 61.111 6.32 0.00 35.84 4.92
4208 4352 6.789457 TCATCCAGGGTTTCATCTACATATCT 59.211 38.462 0.00 0.00 0.00 1.98
4240 4384 0.743097 ATCTAACCTACCGCGTCACC 59.257 55.000 4.92 0.00 0.00 4.02
4241 4385 1.535437 CCATCTAACCTACCGCGTCAC 60.535 57.143 4.92 0.00 0.00 3.67
4242 4386 0.742505 CCATCTAACCTACCGCGTCA 59.257 55.000 4.92 0.00 0.00 4.35
4245 4389 1.340248 ACATCCATCTAACCTACCGCG 59.660 52.381 0.00 0.00 0.00 6.46
4263 4412 2.031769 CGCACTTCAGCATTCAGAAACA 60.032 45.455 0.00 0.00 0.00 2.83
4264 4413 2.031682 ACGCACTTCAGCATTCAGAAAC 60.032 45.455 0.00 0.00 0.00 2.78
4273 4422 1.742831 AGTCAAAAACGCACTTCAGCA 59.257 42.857 0.00 0.00 0.00 4.41
4278 4427 4.370364 ACATTCAGTCAAAAACGCACTT 57.630 36.364 0.00 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.