Multiple sequence alignment - TraesCS5D01G270400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G270400 chr5D 100.000 2801 0 0 1 2801 374131905 374129105 0.000000e+00 5173
1 TraesCS5D01G270400 chr5D 83.408 223 35 2 2357 2577 281214082 281213860 3.660000e-49 206
2 TraesCS5D01G270400 chr5D 83.732 209 32 2 2594 2801 352943249 352943456 2.200000e-46 196
3 TraesCS5D01G270400 chr5A 88.025 2096 148 50 734 2801 475832213 475830193 0.000000e+00 2385
4 TraesCS5D01G270400 chr5A 79.184 245 44 6 2321 2560 118696646 118696888 2.230000e-36 163
5 TraesCS5D01G270400 chr5B 88.604 1132 63 31 739 1848 445652158 445651071 0.000000e+00 1315
6 TraesCS5D01G270400 chr5B 87.266 1123 72 24 737 1843 445763524 445762457 0.000000e+00 1216
7 TraesCS5D01G270400 chr5B 90.000 870 57 16 1950 2801 445650654 445649797 0.000000e+00 1098
8 TraesCS5D01G270400 chr5B 79.607 407 68 13 2318 2718 707697087 707696690 7.640000e-71 278
9 TraesCS5D01G270400 chr5B 84.305 223 32 3 2357 2577 319334189 319333968 6.080000e-52 215
10 TraesCS5D01G270400 chr5B 88.281 128 7 3 1833 1953 445651052 445650926 2.250000e-31 147
11 TraesCS5D01G270400 chr1D 93.182 308 19 1 319 624 272603526 272603219 4.250000e-123 451
12 TraesCS5D01G270400 chr1D 92.903 310 20 1 319 626 359693488 359693179 1.530000e-122 449
13 TraesCS5D01G270400 chr1D 92.810 306 20 2 319 622 218259013 218258708 2.560000e-120 442
14 TraesCS5D01G270400 chr3B 93.160 307 19 1 319 623 655325134 655325440 1.530000e-122 449
15 TraesCS5D01G270400 chr3D 92.652 313 20 2 320 630 1011299 1011610 5.500000e-122 448
16 TraesCS5D01G270400 chr3D 92.810 306 20 1 319 622 283239125 283239430 2.560000e-120 442
17 TraesCS5D01G270400 chr3D 78.302 530 96 15 2266 2786 516673718 516674237 9.680000e-85 324
18 TraesCS5D01G270400 chr2D 93.137 306 19 1 319 622 534852104 534851799 5.500000e-122 448
19 TraesCS5D01G270400 chr7D 92.810 306 20 2 319 622 533394333 533394028 2.560000e-120 442
20 TraesCS5D01G270400 chr4D 92.810 306 20 1 319 622 71375866 71375561 2.560000e-120 442
21 TraesCS5D01G270400 chr2B 77.165 635 118 18 2175 2796 91486402 91485782 7.430000e-91 344
22 TraesCS5D01G270400 chr4B 79.770 435 78 8 2356 2786 655777834 655778262 9.750000e-80 307
23 TraesCS5D01G270400 chrUn 79.327 416 65 11 2388 2801 350667778 350667382 3.560000e-69 272
24 TraesCS5D01G270400 chr7A 79.336 271 45 6 2515 2783 611539497 611539236 2.220000e-41 180
25 TraesCS5D01G270400 chr3A 74.936 391 88 6 2394 2783 421125039 421124658 1.330000e-38 171


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G270400 chr5D 374129105 374131905 2800 True 5173.000000 5173 100.000000 1 2801 1 chr5D.!!$R2 2800
1 TraesCS5D01G270400 chr5A 475830193 475832213 2020 True 2385.000000 2385 88.025000 734 2801 1 chr5A.!!$R1 2067
2 TraesCS5D01G270400 chr5B 445762457 445763524 1067 True 1216.000000 1216 87.266000 737 1843 1 chr5B.!!$R2 1106
3 TraesCS5D01G270400 chr5B 445649797 445652158 2361 True 853.333333 1315 88.961667 739 2801 3 chr5B.!!$R4 2062
4 TraesCS5D01G270400 chr3D 516673718 516674237 519 False 324.000000 324 78.302000 2266 2786 1 chr3D.!!$F3 520
5 TraesCS5D01G270400 chr2B 91485782 91486402 620 True 344.000000 344 77.165000 2175 2796 1 chr2B.!!$R1 621

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
383 384 0.031616 TGGGTTTGGGCCTGAGTTTT 60.032 50.0 4.53 0.00 0.0 2.43 F
424 425 0.042431 ATGGGTTTGGGCTTGGCATA 59.958 50.0 0.00 0.00 0.0 3.14 F
1626 1670 0.108329 AATGTGACCACCGATCGACC 60.108 55.0 18.66 1.06 0.0 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1443 1483 0.246635 ACATACAGCTCGTGTCCACC 59.753 55.0 0.00 0.0 40.94 4.61 R
1701 1745 0.471617 AGAGGCAAAGGGGATCGATG 59.528 55.0 0.54 0.0 0.00 3.84 R
2720 3121 0.182775 ACCGACCCAACAAAAGAGCT 59.817 50.0 0.00 0.0 0.00 4.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 1.963515 GGGATTGGGAATTTGGGATCG 59.036 52.381 0.00 0.00 0.00 3.69
21 22 2.666317 GGATTGGGAATTTGGGATCGT 58.334 47.619 0.00 0.00 0.00 3.73
22 23 3.031013 GGATTGGGAATTTGGGATCGTT 58.969 45.455 0.00 0.00 0.00 3.85
23 24 4.211920 GGATTGGGAATTTGGGATCGTTA 58.788 43.478 0.00 0.00 0.00 3.18
24 25 4.037565 GGATTGGGAATTTGGGATCGTTAC 59.962 45.833 0.00 0.00 0.00 2.50
25 26 3.722908 TGGGAATTTGGGATCGTTACA 57.277 42.857 0.00 0.00 0.00 2.41
26 27 4.035612 TGGGAATTTGGGATCGTTACAA 57.964 40.909 0.00 0.00 0.00 2.41
27 28 4.408276 TGGGAATTTGGGATCGTTACAAA 58.592 39.130 6.13 6.13 38.33 2.83
28 29 5.020132 TGGGAATTTGGGATCGTTACAAAT 58.980 37.500 9.22 9.22 44.18 2.32
33 34 3.840890 TGGGATCGTTACAAATTGTGC 57.159 42.857 9.15 0.88 0.00 4.57
34 35 3.149981 TGGGATCGTTACAAATTGTGCA 58.850 40.909 9.15 0.00 0.00 4.57
35 36 3.057876 TGGGATCGTTACAAATTGTGCAC 60.058 43.478 10.75 10.75 0.00 4.57
36 37 3.498082 GGATCGTTACAAATTGTGCACC 58.502 45.455 15.69 0.00 0.00 5.01
37 38 3.057876 GGATCGTTACAAATTGTGCACCA 60.058 43.478 15.69 2.96 0.00 4.17
38 39 4.541779 GATCGTTACAAATTGTGCACCAA 58.458 39.130 15.69 9.23 37.49 3.67
39 40 3.696898 TCGTTACAAATTGTGCACCAAC 58.303 40.909 15.69 3.92 35.44 3.77
40 41 3.128764 TCGTTACAAATTGTGCACCAACA 59.871 39.130 15.69 0.00 35.44 3.33
41 42 4.047822 CGTTACAAATTGTGCACCAACAT 58.952 39.130 15.69 0.00 35.44 2.71
42 43 5.008712 TCGTTACAAATTGTGCACCAACATA 59.991 36.000 15.69 0.00 35.44 2.29
43 44 5.341993 CGTTACAAATTGTGCACCAACATAG 59.658 40.000 15.69 0.83 35.44 2.23
44 45 4.255833 ACAAATTGTGCACCAACATAGG 57.744 40.909 15.69 0.00 35.44 2.57
45 46 3.894427 ACAAATTGTGCACCAACATAGGA 59.106 39.130 15.69 0.00 35.44 2.94
46 47 4.343526 ACAAATTGTGCACCAACATAGGAA 59.656 37.500 15.69 0.00 35.44 3.36
47 48 5.011943 ACAAATTGTGCACCAACATAGGAAT 59.988 36.000 15.69 0.63 35.44 3.01
48 49 5.743636 AATTGTGCACCAACATAGGAATT 57.256 34.783 15.69 7.25 35.44 2.17
49 50 4.517952 TTGTGCACCAACATAGGAATTG 57.482 40.909 15.69 0.00 0.00 2.32
50 51 2.230992 TGTGCACCAACATAGGAATTGC 59.769 45.455 15.69 0.00 0.00 3.56
51 52 2.493278 GTGCACCAACATAGGAATTGCT 59.507 45.455 5.22 4.41 31.51 3.91
52 53 2.754552 TGCACCAACATAGGAATTGCTC 59.245 45.455 1.37 0.00 31.51 4.26
53 54 3.019564 GCACCAACATAGGAATTGCTCT 58.980 45.455 1.37 0.00 0.00 4.09
54 55 3.065925 GCACCAACATAGGAATTGCTCTC 59.934 47.826 1.37 0.00 0.00 3.20
55 56 4.264253 CACCAACATAGGAATTGCTCTCA 58.736 43.478 1.37 0.00 0.00 3.27
56 57 4.885907 CACCAACATAGGAATTGCTCTCAT 59.114 41.667 1.37 0.00 0.00 2.90
57 58 6.057533 CACCAACATAGGAATTGCTCTCATA 58.942 40.000 1.37 0.00 0.00 2.15
58 59 6.713903 CACCAACATAGGAATTGCTCTCATAT 59.286 38.462 1.37 0.00 0.00 1.78
59 60 6.713903 ACCAACATAGGAATTGCTCTCATATG 59.286 38.462 1.37 3.92 41.24 1.78
60 61 6.349115 CCAACATAGGAATTGCTCTCATATGC 60.349 42.308 1.37 0.00 39.85 3.14
61 62 5.251764 ACATAGGAATTGCTCTCATATGCC 58.748 41.667 1.37 0.00 39.85 4.40
62 63 3.870538 AGGAATTGCTCTCATATGCCA 57.129 42.857 0.00 0.00 0.00 4.92
63 64 4.383931 AGGAATTGCTCTCATATGCCAT 57.616 40.909 0.00 0.00 0.00 4.40
64 65 5.509832 AGGAATTGCTCTCATATGCCATA 57.490 39.130 0.00 0.00 0.00 2.74
65 66 6.075949 AGGAATTGCTCTCATATGCCATAT 57.924 37.500 0.00 0.00 0.00 1.78
66 67 5.886474 AGGAATTGCTCTCATATGCCATATG 59.114 40.000 16.95 16.95 43.09 1.78
67 68 5.651139 GGAATTGCTCTCATATGCCATATGT 59.349 40.000 21.02 2.81 42.49 2.29
68 69 6.152323 GGAATTGCTCTCATATGCCATATGTT 59.848 38.462 21.02 8.83 42.49 2.71
69 70 6.754702 ATTGCTCTCATATGCCATATGTTC 57.245 37.500 21.02 11.06 42.49 3.18
70 71 4.582869 TGCTCTCATATGCCATATGTTCC 58.417 43.478 21.02 10.80 42.49 3.62
71 72 4.041938 TGCTCTCATATGCCATATGTTCCA 59.958 41.667 21.02 12.72 42.49 3.53
72 73 5.005740 GCTCTCATATGCCATATGTTCCAA 58.994 41.667 21.02 4.18 42.49 3.53
73 74 5.651139 GCTCTCATATGCCATATGTTCCAAT 59.349 40.000 21.02 0.00 42.49 3.16
74 75 6.825213 GCTCTCATATGCCATATGTTCCAATA 59.175 38.462 21.02 2.92 42.49 1.90
75 76 7.337689 GCTCTCATATGCCATATGTTCCAATAA 59.662 37.037 21.02 2.29 42.49 1.40
76 77 9.234827 CTCTCATATGCCATATGTTCCAATAAA 57.765 33.333 21.02 1.67 42.49 1.40
77 78 9.758021 TCTCATATGCCATATGTTCCAATAAAT 57.242 29.630 21.02 0.00 42.49 1.40
78 79 9.797556 CTCATATGCCATATGTTCCAATAAATG 57.202 33.333 21.02 0.00 42.49 2.32
79 80 8.252417 TCATATGCCATATGTTCCAATAAATGC 58.748 33.333 21.02 0.00 42.49 3.56
80 81 5.212532 TGCCATATGTTCCAATAAATGCC 57.787 39.130 1.24 0.00 0.00 4.40
81 82 4.900652 TGCCATATGTTCCAATAAATGCCT 59.099 37.500 1.24 0.00 0.00 4.75
82 83 5.366186 TGCCATATGTTCCAATAAATGCCTT 59.634 36.000 1.24 0.00 0.00 4.35
83 84 5.697633 GCCATATGTTCCAATAAATGCCTTG 59.302 40.000 1.24 0.00 0.00 3.61
84 85 6.225318 CCATATGTTCCAATAAATGCCTTGG 58.775 40.000 1.24 0.00 42.72 3.61
85 86 4.758773 ATGTTCCAATAAATGCCTTGGG 57.241 40.909 1.78 0.00 41.85 4.12
86 87 2.836981 TGTTCCAATAAATGCCTTGGGG 59.163 45.455 1.78 0.00 41.85 4.96
87 88 2.170397 GTTCCAATAAATGCCTTGGGGG 59.830 50.000 1.78 0.00 41.85 5.40
88 89 1.648568 TCCAATAAATGCCTTGGGGGA 59.351 47.619 1.78 0.00 41.85 4.81
89 90 2.041701 CCAATAAATGCCTTGGGGGAG 58.958 52.381 0.00 0.00 38.60 4.30
90 91 1.413812 CAATAAATGCCTTGGGGGAGC 59.586 52.381 0.00 0.00 36.09 4.70
91 92 0.636101 ATAAATGCCTTGGGGGAGCA 59.364 50.000 0.00 0.00 41.50 4.26
92 93 0.324275 TAAATGCCTTGGGGGAGCAC 60.324 55.000 0.00 0.00 39.77 4.40
93 94 2.384933 AAATGCCTTGGGGGAGCACA 62.385 55.000 0.00 0.00 39.77 4.57
94 95 2.384933 AATGCCTTGGGGGAGCACAA 62.385 55.000 0.00 0.00 39.77 3.33
95 96 2.991540 GCCTTGGGGGAGCACAAC 60.992 66.667 0.00 0.00 37.23 3.32
96 97 2.846532 CCTTGGGGGAGCACAACT 59.153 61.111 0.00 0.00 37.23 3.16
97 98 1.604593 CCTTGGGGGAGCACAACTG 60.605 63.158 0.00 0.00 37.23 3.16
98 99 1.604593 CTTGGGGGAGCACAACTGG 60.605 63.158 0.00 0.00 0.00 4.00
99 100 3.808218 TTGGGGGAGCACAACTGGC 62.808 63.158 0.00 0.00 0.00 4.85
100 101 4.284550 GGGGGAGCACAACTGGCA 62.285 66.667 0.00 0.00 0.00 4.92
101 102 2.036256 GGGGAGCACAACTGGCAT 59.964 61.111 0.00 0.00 0.00 4.40
102 103 2.345760 GGGGAGCACAACTGGCATG 61.346 63.158 0.00 0.00 0.00 4.06
103 104 2.345760 GGGAGCACAACTGGCATGG 61.346 63.158 0.00 0.00 0.00 3.66
104 105 1.303561 GGAGCACAACTGGCATGGA 60.304 57.895 0.00 0.00 0.00 3.41
105 106 0.895100 GGAGCACAACTGGCATGGAA 60.895 55.000 0.00 0.00 0.00 3.53
106 107 0.961019 GAGCACAACTGGCATGGAAA 59.039 50.000 0.00 0.00 0.00 3.13
107 108 1.547372 GAGCACAACTGGCATGGAAAT 59.453 47.619 0.00 0.00 0.00 2.17
108 109 1.547372 AGCACAACTGGCATGGAAATC 59.453 47.619 0.00 0.00 0.00 2.17
109 110 1.273048 GCACAACTGGCATGGAAATCA 59.727 47.619 0.00 0.00 0.00 2.57
110 111 2.093869 GCACAACTGGCATGGAAATCAT 60.094 45.455 0.00 0.00 36.31 2.45
111 112 3.130869 GCACAACTGGCATGGAAATCATA 59.869 43.478 0.00 0.00 34.12 2.15
112 113 4.202182 GCACAACTGGCATGGAAATCATAT 60.202 41.667 0.00 0.00 34.12 1.78
113 114 5.009911 GCACAACTGGCATGGAAATCATATA 59.990 40.000 0.00 0.00 34.12 0.86
114 115 6.461370 GCACAACTGGCATGGAAATCATATAA 60.461 38.462 0.00 0.00 34.12 0.98
115 116 7.663827 CACAACTGGCATGGAAATCATATAAT 58.336 34.615 0.00 0.00 34.12 1.28
116 117 8.795513 CACAACTGGCATGGAAATCATATAATA 58.204 33.333 0.00 0.00 34.12 0.98
117 118 9.365906 ACAACTGGCATGGAAATCATATAATAA 57.634 29.630 0.00 0.00 34.12 1.40
120 121 9.758021 ACTGGCATGGAAATCATATAATAATCA 57.242 29.630 0.00 0.00 34.12 2.57
175 176 9.796242 ATAAGATCTATTGTCATCTTATCCCCT 57.204 33.333 0.00 0.00 44.02 4.79
177 178 8.837099 AGATCTATTGTCATCTTATCCCCTAG 57.163 38.462 0.00 0.00 0.00 3.02
178 179 8.628281 AGATCTATTGTCATCTTATCCCCTAGA 58.372 37.037 0.00 0.00 0.00 2.43
179 180 9.432982 GATCTATTGTCATCTTATCCCCTAGAT 57.567 37.037 0.00 0.00 39.15 1.98
180 181 8.830915 TCTATTGTCATCTTATCCCCTAGATC 57.169 38.462 0.00 0.00 36.33 2.75
181 182 8.401894 TCTATTGTCATCTTATCCCCTAGATCA 58.598 37.037 0.00 0.00 36.33 2.92
182 183 6.924913 TTGTCATCTTATCCCCTAGATCAG 57.075 41.667 0.00 0.00 36.33 2.90
183 184 5.970289 TGTCATCTTATCCCCTAGATCAGT 58.030 41.667 0.00 0.00 36.33 3.41
184 185 7.103745 TGTCATCTTATCCCCTAGATCAGTA 57.896 40.000 0.00 0.00 36.33 2.74
185 186 6.948886 TGTCATCTTATCCCCTAGATCAGTAC 59.051 42.308 0.00 0.00 36.33 2.73
186 187 6.948886 GTCATCTTATCCCCTAGATCAGTACA 59.051 42.308 0.00 0.00 36.33 2.90
187 188 7.451877 GTCATCTTATCCCCTAGATCAGTACAA 59.548 40.741 0.00 0.00 36.33 2.41
188 189 7.671819 TCATCTTATCCCCTAGATCAGTACAAG 59.328 40.741 0.00 0.00 36.33 3.16
189 190 6.923670 TCTTATCCCCTAGATCAGTACAAGT 58.076 40.000 0.00 0.00 36.33 3.16
190 191 7.363031 TCTTATCCCCTAGATCAGTACAAGTT 58.637 38.462 0.00 0.00 36.33 2.66
191 192 5.878406 ATCCCCTAGATCAGTACAAGTTG 57.122 43.478 0.00 0.00 0.00 3.16
192 193 4.030913 TCCCCTAGATCAGTACAAGTTGG 58.969 47.826 7.96 0.00 0.00 3.77
193 194 4.030913 CCCCTAGATCAGTACAAGTTGGA 58.969 47.826 7.96 0.00 0.00 3.53
194 195 4.469945 CCCCTAGATCAGTACAAGTTGGAA 59.530 45.833 7.96 0.00 0.00 3.53
195 196 5.045869 CCCCTAGATCAGTACAAGTTGGAAA 60.046 44.000 7.96 0.00 0.00 3.13
196 197 6.353082 CCCCTAGATCAGTACAAGTTGGAAAT 60.353 42.308 7.96 0.00 0.00 2.17
197 198 6.540189 CCCTAGATCAGTACAAGTTGGAAATG 59.460 42.308 7.96 4.82 0.00 2.32
198 199 7.331026 CCTAGATCAGTACAAGTTGGAAATGA 58.669 38.462 7.96 10.04 0.00 2.57
199 200 7.278868 CCTAGATCAGTACAAGTTGGAAATGAC 59.721 40.741 7.96 5.47 0.00 3.06
200 201 5.940470 AGATCAGTACAAGTTGGAAATGACC 59.060 40.000 7.96 1.21 0.00 4.02
201 202 5.042463 TCAGTACAAGTTGGAAATGACCA 57.958 39.130 7.96 0.00 38.24 4.02
202 203 5.630121 TCAGTACAAGTTGGAAATGACCAT 58.370 37.500 7.96 0.00 39.82 3.55
203 204 5.473162 TCAGTACAAGTTGGAAATGACCATG 59.527 40.000 7.96 0.00 39.82 3.66
204 205 5.241506 CAGTACAAGTTGGAAATGACCATGT 59.758 40.000 7.96 0.00 39.82 3.21
205 206 5.833131 AGTACAAGTTGGAAATGACCATGTT 59.167 36.000 7.96 0.00 39.82 2.71
206 207 5.200368 ACAAGTTGGAAATGACCATGTTC 57.800 39.130 7.96 0.00 39.82 3.18
207 208 4.039124 ACAAGTTGGAAATGACCATGTTCC 59.961 41.667 7.96 5.32 41.09 3.62
211 212 4.804868 TGGAAATGACCATGTTCCAATG 57.195 40.909 11.27 0.00 46.03 2.82
212 213 3.055963 TGGAAATGACCATGTTCCAATGC 60.056 43.478 11.27 0.00 46.03 3.56
213 214 3.055963 GGAAATGACCATGTTCCAATGCA 60.056 43.478 7.07 0.00 40.53 3.96
214 215 4.383335 GGAAATGACCATGTTCCAATGCAT 60.383 41.667 7.07 0.00 40.53 3.96
215 216 4.829872 AATGACCATGTTCCAATGCATT 57.170 36.364 5.99 5.99 0.00 3.56
216 217 3.872511 TGACCATGTTCCAATGCATTC 57.127 42.857 9.53 0.00 0.00 2.67
217 218 3.433343 TGACCATGTTCCAATGCATTCT 58.567 40.909 9.53 0.00 0.00 2.40
218 219 3.193903 TGACCATGTTCCAATGCATTCTG 59.806 43.478 9.53 3.96 0.00 3.02
219 220 3.433343 ACCATGTTCCAATGCATTCTGA 58.567 40.909 9.53 6.52 0.00 3.27
220 221 4.028131 ACCATGTTCCAATGCATTCTGAT 58.972 39.130 9.53 0.00 0.00 2.90
221 222 4.468510 ACCATGTTCCAATGCATTCTGATT 59.531 37.500 9.53 0.00 0.00 2.57
222 223 5.657745 ACCATGTTCCAATGCATTCTGATTA 59.342 36.000 9.53 2.41 0.00 1.75
223 224 6.183360 ACCATGTTCCAATGCATTCTGATTAG 60.183 38.462 9.53 0.00 0.00 1.73
224 225 5.840243 TGTTCCAATGCATTCTGATTAGG 57.160 39.130 9.53 6.16 0.00 2.69
225 226 5.263599 TGTTCCAATGCATTCTGATTAGGT 58.736 37.500 9.53 0.00 0.00 3.08
226 227 5.125900 TGTTCCAATGCATTCTGATTAGGTG 59.874 40.000 9.53 0.00 0.00 4.00
227 228 5.114764 TCCAATGCATTCTGATTAGGTGA 57.885 39.130 9.53 0.00 0.00 4.02
228 229 5.508567 TCCAATGCATTCTGATTAGGTGAA 58.491 37.500 9.53 0.00 0.00 3.18
229 230 5.357878 TCCAATGCATTCTGATTAGGTGAAC 59.642 40.000 9.53 0.00 0.00 3.18
230 231 5.125900 CCAATGCATTCTGATTAGGTGAACA 59.874 40.000 9.53 0.00 0.00 3.18
231 232 6.183360 CCAATGCATTCTGATTAGGTGAACAT 60.183 38.462 9.53 0.00 0.00 2.71
232 233 6.630444 ATGCATTCTGATTAGGTGAACATC 57.370 37.500 0.00 0.00 0.00 3.06
233 234 5.499313 TGCATTCTGATTAGGTGAACATCA 58.501 37.500 0.00 0.00 0.00 3.07
234 235 5.355071 TGCATTCTGATTAGGTGAACATCAC 59.645 40.000 1.88 1.88 46.23 3.06
235 236 5.587844 GCATTCTGATTAGGTGAACATCACT 59.412 40.000 10.06 0.35 46.19 3.41
236 237 6.457934 GCATTCTGATTAGGTGAACATCACTG 60.458 42.308 10.06 0.00 46.19 3.66
237 238 5.745312 TCTGATTAGGTGAACATCACTGT 57.255 39.130 10.06 1.75 46.19 3.55
239 240 7.239763 TCTGATTAGGTGAACATCACTGTTA 57.760 36.000 10.06 0.00 45.57 2.41
240 241 7.097192 TCTGATTAGGTGAACATCACTGTTAC 58.903 38.462 10.06 1.94 45.57 2.50
241 242 7.004555 TGATTAGGTGAACATCACTGTTACT 57.995 36.000 10.06 1.89 45.57 2.24
242 243 8.129496 TGATTAGGTGAACATCACTGTTACTA 57.871 34.615 10.06 1.04 45.57 1.82
243 244 8.758829 TGATTAGGTGAACATCACTGTTACTAT 58.241 33.333 10.06 0.00 45.57 2.12
244 245 9.250624 GATTAGGTGAACATCACTGTTACTATC 57.749 37.037 10.06 2.21 45.57 2.08
245 246 5.651530 AGGTGAACATCACTGTTACTATCG 58.348 41.667 10.06 0.00 45.57 2.92
246 247 5.417894 AGGTGAACATCACTGTTACTATCGA 59.582 40.000 10.06 0.00 45.57 3.59
247 248 6.096987 AGGTGAACATCACTGTTACTATCGAT 59.903 38.462 2.16 2.16 45.57 3.59
248 249 7.284716 AGGTGAACATCACTGTTACTATCGATA 59.715 37.037 4.78 4.78 45.57 2.92
249 250 7.919091 GGTGAACATCACTGTTACTATCGATAA 59.081 37.037 6.58 0.00 45.57 1.75
250 251 9.297586 GTGAACATCACTGTTACTATCGATAAA 57.702 33.333 6.58 0.00 45.57 1.40
251 252 9.863845 TGAACATCACTGTTACTATCGATAAAA 57.136 29.630 6.58 1.42 45.57 1.52
268 269 1.398692 AAAAAGATGTGGTGCCGTGT 58.601 45.000 0.00 0.00 0.00 4.49
269 270 1.398692 AAAAGATGTGGTGCCGTGTT 58.601 45.000 0.00 0.00 0.00 3.32
270 271 0.667993 AAAGATGTGGTGCCGTGTTG 59.332 50.000 0.00 0.00 0.00 3.33
271 272 0.179032 AAGATGTGGTGCCGTGTTGA 60.179 50.000 0.00 0.00 0.00 3.18
272 273 0.179032 AGATGTGGTGCCGTGTTGAA 60.179 50.000 0.00 0.00 0.00 2.69
273 274 0.665835 GATGTGGTGCCGTGTTGAAA 59.334 50.000 0.00 0.00 0.00 2.69
274 275 1.269448 GATGTGGTGCCGTGTTGAAAT 59.731 47.619 0.00 0.00 0.00 2.17
275 276 1.968704 TGTGGTGCCGTGTTGAAATA 58.031 45.000 0.00 0.00 0.00 1.40
276 277 1.876799 TGTGGTGCCGTGTTGAAATAG 59.123 47.619 0.00 0.00 0.00 1.73
277 278 2.147958 GTGGTGCCGTGTTGAAATAGA 58.852 47.619 0.00 0.00 0.00 1.98
278 279 2.159627 GTGGTGCCGTGTTGAAATAGAG 59.840 50.000 0.00 0.00 0.00 2.43
279 280 1.737793 GGTGCCGTGTTGAAATAGAGG 59.262 52.381 0.00 0.00 0.00 3.69
280 281 2.614481 GGTGCCGTGTTGAAATAGAGGA 60.614 50.000 0.00 0.00 0.00 3.71
281 282 3.270877 GTGCCGTGTTGAAATAGAGGAT 58.729 45.455 0.00 0.00 0.00 3.24
282 283 3.063997 GTGCCGTGTTGAAATAGAGGATG 59.936 47.826 0.00 0.00 0.00 3.51
283 284 3.270877 GCCGTGTTGAAATAGAGGATGT 58.729 45.455 0.00 0.00 0.00 3.06
284 285 3.063997 GCCGTGTTGAAATAGAGGATGTG 59.936 47.826 0.00 0.00 0.00 3.21
285 286 4.253685 CCGTGTTGAAATAGAGGATGTGT 58.746 43.478 0.00 0.00 0.00 3.72
286 287 5.416083 CCGTGTTGAAATAGAGGATGTGTA 58.584 41.667 0.00 0.00 0.00 2.90
287 288 5.291128 CCGTGTTGAAATAGAGGATGTGTAC 59.709 44.000 0.00 0.00 0.00 2.90
288 289 6.100004 CGTGTTGAAATAGAGGATGTGTACT 58.900 40.000 0.00 0.00 0.00 2.73
289 290 7.255569 CGTGTTGAAATAGAGGATGTGTACTA 58.744 38.462 0.00 0.00 0.00 1.82
290 291 7.432545 CGTGTTGAAATAGAGGATGTGTACTAG 59.567 40.741 0.00 0.00 0.00 2.57
291 292 8.251721 GTGTTGAAATAGAGGATGTGTACTAGT 58.748 37.037 0.00 0.00 0.00 2.57
292 293 8.467598 TGTTGAAATAGAGGATGTGTACTAGTC 58.532 37.037 0.00 0.00 0.00 2.59
293 294 7.584122 TGAAATAGAGGATGTGTACTAGTCC 57.416 40.000 0.00 0.00 0.00 3.85
294 295 7.355101 TGAAATAGAGGATGTGTACTAGTCCT 58.645 38.462 0.00 11.61 43.54 3.85
295 296 7.285629 TGAAATAGAGGATGTGTACTAGTCCTG 59.714 40.741 15.21 0.00 41.03 3.86
296 297 3.904717 AGAGGATGTGTACTAGTCCTGG 58.095 50.000 15.21 0.00 41.03 4.45
297 298 2.362717 GAGGATGTGTACTAGTCCTGGC 59.637 54.545 15.21 2.59 41.03 4.85
298 299 1.413077 GGATGTGTACTAGTCCTGGCC 59.587 57.143 0.00 0.00 0.00 5.36
299 300 2.108168 GATGTGTACTAGTCCTGGCCA 58.892 52.381 4.71 4.71 0.00 5.36
300 301 2.247699 TGTGTACTAGTCCTGGCCAT 57.752 50.000 5.51 0.00 0.00 4.40
301 302 2.108168 TGTGTACTAGTCCTGGCCATC 58.892 52.381 5.51 0.00 0.00 3.51
302 303 2.292257 TGTGTACTAGTCCTGGCCATCT 60.292 50.000 5.51 8.22 0.00 2.90
303 304 2.362717 GTGTACTAGTCCTGGCCATCTC 59.637 54.545 5.51 0.00 0.00 2.75
304 305 2.245028 TGTACTAGTCCTGGCCATCTCT 59.755 50.000 5.51 7.44 0.00 3.10
305 306 1.786937 ACTAGTCCTGGCCATCTCTG 58.213 55.000 5.51 5.21 0.00 3.35
306 307 1.289231 ACTAGTCCTGGCCATCTCTGA 59.711 52.381 5.51 0.00 0.00 3.27
307 308 1.686052 CTAGTCCTGGCCATCTCTGAC 59.314 57.143 5.51 8.58 0.00 3.51
308 309 0.980231 AGTCCTGGCCATCTCTGACC 60.980 60.000 5.51 0.00 0.00 4.02
309 310 1.690633 TCCTGGCCATCTCTGACCC 60.691 63.158 5.51 0.00 0.00 4.46
310 311 2.503061 CTGGCCATCTCTGACCCG 59.497 66.667 5.51 0.00 0.00 5.28
311 312 3.083349 TGGCCATCTCTGACCCGG 61.083 66.667 0.00 0.00 0.00 5.73
312 313 4.554036 GGCCATCTCTGACCCGGC 62.554 72.222 0.00 0.00 42.21 6.13
313 314 3.474570 GCCATCTCTGACCCGGCT 61.475 66.667 0.00 0.00 39.73 5.52
314 315 2.818132 CCATCTCTGACCCGGCTC 59.182 66.667 0.00 0.00 0.00 4.70
315 316 1.760086 CCATCTCTGACCCGGCTCT 60.760 63.158 0.00 0.00 0.00 4.09
316 317 1.440893 CATCTCTGACCCGGCTCTG 59.559 63.158 0.00 0.00 0.00 3.35
317 318 1.000993 ATCTCTGACCCGGCTCTGT 59.999 57.895 0.00 0.00 0.00 3.41
318 319 1.040339 ATCTCTGACCCGGCTCTGTC 61.040 60.000 0.00 0.00 0.00 3.51
319 320 3.057547 CTCTGACCCGGCTCTGTCG 62.058 68.421 0.00 0.00 34.18 4.35
326 327 3.458163 CGGCTCTGTCGGCCCTAA 61.458 66.667 0.00 0.00 46.24 2.69
327 328 2.987125 GGCTCTGTCGGCCCTAAA 59.013 61.111 0.00 0.00 43.49 1.85
328 329 1.298667 GGCTCTGTCGGCCCTAAAA 59.701 57.895 0.00 0.00 43.49 1.52
329 330 0.107165 GGCTCTGTCGGCCCTAAAAT 60.107 55.000 0.00 0.00 43.49 1.82
330 331 1.300481 GCTCTGTCGGCCCTAAAATC 58.700 55.000 0.00 0.00 0.00 2.17
331 332 1.954927 CTCTGTCGGCCCTAAAATCC 58.045 55.000 0.00 0.00 0.00 3.01
332 333 1.209504 CTCTGTCGGCCCTAAAATCCA 59.790 52.381 0.00 0.00 0.00 3.41
333 334 1.209504 TCTGTCGGCCCTAAAATCCAG 59.790 52.381 0.00 0.00 0.00 3.86
334 335 0.254747 TGTCGGCCCTAAAATCCAGG 59.745 55.000 0.00 0.00 0.00 4.45
340 341 2.959465 CCCTAAAATCCAGGGCCTAG 57.041 55.000 5.28 0.00 46.27 3.02
341 342 1.425448 CCCTAAAATCCAGGGCCTAGG 59.575 57.143 5.28 10.90 46.27 3.02
342 343 1.202940 CCTAAAATCCAGGGCCTAGGC 60.203 57.143 26.55 26.55 41.06 3.93
378 379 4.299796 GGCTGGGTTTGGGCCTGA 62.300 66.667 4.53 0.00 42.31 3.86
379 380 2.677875 GCTGGGTTTGGGCCTGAG 60.678 66.667 4.53 0.00 0.00 3.35
380 381 2.846532 CTGGGTTTGGGCCTGAGT 59.153 61.111 4.53 0.00 0.00 3.41
381 382 1.153756 CTGGGTTTGGGCCTGAGTT 59.846 57.895 4.53 0.00 0.00 3.01
382 383 0.469892 CTGGGTTTGGGCCTGAGTTT 60.470 55.000 4.53 0.00 0.00 2.66
383 384 0.031616 TGGGTTTGGGCCTGAGTTTT 60.032 50.000 4.53 0.00 0.00 2.43
384 385 0.392706 GGGTTTGGGCCTGAGTTTTG 59.607 55.000 4.53 0.00 0.00 2.44
385 386 1.408969 GGTTTGGGCCTGAGTTTTGA 58.591 50.000 4.53 0.00 0.00 2.69
386 387 1.341209 GGTTTGGGCCTGAGTTTTGAG 59.659 52.381 4.53 0.00 0.00 3.02
387 388 1.039856 TTTGGGCCTGAGTTTTGAGC 58.960 50.000 4.53 0.00 0.00 4.26
388 389 0.827507 TTGGGCCTGAGTTTTGAGCC 60.828 55.000 4.53 0.00 43.09 4.70
389 390 3.686760 GGCCTGAGTTTTGAGCCC 58.313 61.111 0.00 0.00 37.66 5.19
390 391 1.228552 GGCCTGAGTTTTGAGCCCA 60.229 57.895 0.00 0.00 37.66 5.36
391 392 1.527433 GGCCTGAGTTTTGAGCCCAC 61.527 60.000 0.00 0.00 37.66 4.61
392 393 1.527433 GCCTGAGTTTTGAGCCCACC 61.527 60.000 0.00 0.00 0.00 4.61
393 394 0.178992 CCTGAGTTTTGAGCCCACCA 60.179 55.000 0.00 0.00 0.00 4.17
394 395 1.242076 CTGAGTTTTGAGCCCACCAG 58.758 55.000 0.00 0.00 0.00 4.00
395 396 0.823356 TGAGTTTTGAGCCCACCAGC 60.823 55.000 0.00 0.00 0.00 4.85
396 397 0.823356 GAGTTTTGAGCCCACCAGCA 60.823 55.000 0.00 0.00 34.23 4.41
397 398 0.825010 AGTTTTGAGCCCACCAGCAG 60.825 55.000 0.00 0.00 34.23 4.24
398 399 1.531365 TTTTGAGCCCACCAGCAGG 60.531 57.895 0.00 0.00 42.21 4.85
409 410 4.517934 CAGCAGGGCCTGGATGGG 62.518 72.222 33.43 8.90 36.00 4.00
411 412 4.066139 GCAGGGCCTGGATGGGTT 62.066 66.667 33.43 0.00 36.00 4.11
412 413 2.772924 CAGGGCCTGGATGGGTTT 59.227 61.111 26.34 0.00 36.00 3.27
413 414 1.683365 CAGGGCCTGGATGGGTTTG 60.683 63.158 26.34 0.00 36.00 2.93
414 415 2.364186 GGGCCTGGATGGGTTTGG 60.364 66.667 0.84 0.00 36.00 3.28
415 416 2.364186 GGCCTGGATGGGTTTGGG 60.364 66.667 0.00 0.00 36.00 4.12
416 417 3.076916 GCCTGGATGGGTTTGGGC 61.077 66.667 0.00 0.00 36.00 5.36
417 418 2.772924 CCTGGATGGGTTTGGGCT 59.227 61.111 0.00 0.00 0.00 5.19
418 419 1.079073 CCTGGATGGGTTTGGGCTT 59.921 57.895 0.00 0.00 0.00 4.35
419 420 1.259840 CCTGGATGGGTTTGGGCTTG 61.260 60.000 0.00 0.00 0.00 4.01
420 421 1.229145 TGGATGGGTTTGGGCTTGG 60.229 57.895 0.00 0.00 0.00 3.61
421 422 2.659063 GGATGGGTTTGGGCTTGGC 61.659 63.158 0.00 0.00 0.00 4.52
422 423 1.912763 GATGGGTTTGGGCTTGGCA 60.913 57.895 0.00 0.00 0.00 4.92
423 424 1.229593 ATGGGTTTGGGCTTGGCAT 60.230 52.632 0.00 0.00 0.00 4.40
424 425 0.042431 ATGGGTTTGGGCTTGGCATA 59.958 50.000 0.00 0.00 0.00 3.14
425 426 0.042431 TGGGTTTGGGCTTGGCATAT 59.958 50.000 0.00 0.00 0.00 1.78
426 427 1.203237 GGGTTTGGGCTTGGCATATT 58.797 50.000 0.00 0.00 0.00 1.28
427 428 1.134431 GGGTTTGGGCTTGGCATATTG 60.134 52.381 0.00 0.00 0.00 1.90
428 429 1.134431 GGTTTGGGCTTGGCATATTGG 60.134 52.381 0.00 0.00 0.00 3.16
429 430 0.540923 TTTGGGCTTGGCATATTGGC 59.459 50.000 0.00 0.00 44.03 4.52
440 441 4.405116 GGCATATTGGCATTTTGAGGAA 57.595 40.909 4.37 0.00 43.14 3.36
441 442 4.374399 GGCATATTGGCATTTTGAGGAAG 58.626 43.478 4.37 0.00 43.14 3.46
442 443 4.099881 GGCATATTGGCATTTTGAGGAAGA 59.900 41.667 4.37 0.00 43.14 2.87
443 444 5.287226 GCATATTGGCATTTTGAGGAAGAG 58.713 41.667 4.37 0.00 0.00 2.85
444 445 5.738208 GCATATTGGCATTTTGAGGAAGAGG 60.738 44.000 4.37 0.00 0.00 3.69
445 446 1.549203 TGGCATTTTGAGGAAGAGGC 58.451 50.000 0.00 0.00 0.00 4.70
446 447 0.820226 GGCATTTTGAGGAAGAGGCC 59.180 55.000 0.00 0.00 0.00 5.19
447 448 0.820226 GCATTTTGAGGAAGAGGCCC 59.180 55.000 0.00 0.00 0.00 5.80
448 449 1.892329 GCATTTTGAGGAAGAGGCCCA 60.892 52.381 0.00 0.00 0.00 5.36
449 450 2.097825 CATTTTGAGGAAGAGGCCCAG 58.902 52.381 0.00 0.00 0.00 4.45
450 451 0.251341 TTTTGAGGAAGAGGCCCAGC 60.251 55.000 0.00 0.00 0.00 4.85
462 463 3.338250 CCCAGCCCACAGCCCTAA 61.338 66.667 0.00 0.00 45.47 2.69
463 464 2.273449 CCAGCCCACAGCCCTAAG 59.727 66.667 0.00 0.00 45.47 2.18
464 465 2.439156 CAGCCCACAGCCCTAAGC 60.439 66.667 0.00 0.00 45.47 3.09
465 466 3.732849 AGCCCACAGCCCTAAGCC 61.733 66.667 0.00 0.00 45.47 4.35
466 467 4.822628 GCCCACAGCCCTAAGCCC 62.823 72.222 0.00 0.00 45.47 5.19
467 468 3.017581 CCCACAGCCCTAAGCCCT 61.018 66.667 0.00 0.00 45.47 5.19
468 469 1.692749 CCCACAGCCCTAAGCCCTA 60.693 63.158 0.00 0.00 45.47 3.53
469 470 1.279025 CCCACAGCCCTAAGCCCTAA 61.279 60.000 0.00 0.00 45.47 2.69
470 471 0.181350 CCACAGCCCTAAGCCCTAAG 59.819 60.000 0.00 0.00 45.47 2.18
471 472 0.181350 CACAGCCCTAAGCCCTAAGG 59.819 60.000 0.00 0.00 45.47 2.69
482 483 3.596362 CCCTAAGGGCTTTTCAGGG 57.404 57.895 3.08 3.08 40.10 4.45
483 484 0.684479 CCCTAAGGGCTTTTCAGGGC 60.684 60.000 4.44 0.00 39.62 5.19
484 485 0.332972 CCTAAGGGCTTTTCAGGGCT 59.667 55.000 0.00 0.00 0.00 5.19
485 486 1.272704 CCTAAGGGCTTTTCAGGGCTT 60.273 52.381 0.00 0.00 0.00 4.35
486 487 2.529632 CTAAGGGCTTTTCAGGGCTTT 58.470 47.619 0.00 0.00 33.62 3.51
487 488 1.806496 AAGGGCTTTTCAGGGCTTTT 58.194 45.000 0.00 0.00 0.00 2.27
488 489 1.806496 AGGGCTTTTCAGGGCTTTTT 58.194 45.000 0.00 0.00 0.00 1.94
489 490 2.970987 AGGGCTTTTCAGGGCTTTTTA 58.029 42.857 0.00 0.00 0.00 1.52
490 491 2.632996 AGGGCTTTTCAGGGCTTTTTAC 59.367 45.455 0.00 0.00 0.00 2.01
491 492 2.367241 GGGCTTTTCAGGGCTTTTTACA 59.633 45.455 0.00 0.00 0.00 2.41
492 493 3.007940 GGGCTTTTCAGGGCTTTTTACAT 59.992 43.478 0.00 0.00 0.00 2.29
493 494 3.996363 GGCTTTTCAGGGCTTTTTACATG 59.004 43.478 0.00 0.00 0.00 3.21
494 495 4.262420 GGCTTTTCAGGGCTTTTTACATGA 60.262 41.667 0.00 0.00 0.00 3.07
495 496 5.482006 GCTTTTCAGGGCTTTTTACATGAT 58.518 37.500 0.00 0.00 0.00 2.45
496 497 5.349543 GCTTTTCAGGGCTTTTTACATGATG 59.650 40.000 0.00 0.00 0.00 3.07
497 498 5.404466 TTTCAGGGCTTTTTACATGATGG 57.596 39.130 0.00 0.00 0.00 3.51
498 499 3.364549 TCAGGGCTTTTTACATGATGGG 58.635 45.455 0.00 0.00 0.00 4.00
499 500 2.110578 AGGGCTTTTTACATGATGGGC 58.889 47.619 0.00 0.00 0.00 5.36
500 501 1.138859 GGGCTTTTTACATGATGGGCC 59.861 52.381 0.00 0.00 37.82 5.80
501 502 1.138859 GGCTTTTTACATGATGGGCCC 59.861 52.381 17.59 17.59 33.07 5.80
502 503 1.202405 GCTTTTTACATGATGGGCCCG 60.202 52.381 19.37 4.36 0.00 6.13
503 504 1.408702 CTTTTTACATGATGGGCCCGG 59.591 52.381 19.37 6.47 0.00 5.73
504 505 0.396417 TTTTACATGATGGGCCCGGG 60.396 55.000 19.09 19.09 0.00 5.73
505 506 1.576368 TTTACATGATGGGCCCGGGT 61.576 55.000 24.63 12.79 0.00 5.28
506 507 1.576368 TTACATGATGGGCCCGGGTT 61.576 55.000 24.63 4.51 0.00 4.11
507 508 2.277672 TACATGATGGGCCCGGGTTG 62.278 60.000 24.63 14.84 0.00 3.77
508 509 4.141876 ATGATGGGCCCGGGTTGG 62.142 66.667 24.63 0.00 37.55 3.77
517 518 3.863606 CCGGGTTGGGCTTGAAAA 58.136 55.556 0.00 0.00 0.00 2.29
530 531 2.017049 CTTGAAAAGTAGGCCCGATGG 58.983 52.381 0.00 0.00 39.70 3.51
531 532 0.988832 TGAAAAGTAGGCCCGATGGT 59.011 50.000 0.00 0.00 0.00 3.55
532 533 2.189676 TGAAAAGTAGGCCCGATGGTA 58.810 47.619 0.00 0.00 0.00 3.25
533 534 2.169769 TGAAAAGTAGGCCCGATGGTAG 59.830 50.000 0.00 0.00 0.00 3.18
534 535 1.129058 AAAGTAGGCCCGATGGTAGG 58.871 55.000 0.00 0.00 0.00 3.18
540 541 3.560251 CCCGATGGTAGGGCCTGG 61.560 72.222 18.53 7.41 42.77 4.45
541 542 3.560251 CCGATGGTAGGGCCTGGG 61.560 72.222 18.53 3.75 38.35 4.45
542 543 3.560251 CGATGGTAGGGCCTGGGG 61.560 72.222 18.53 0.00 38.35 4.96
543 544 3.178611 GATGGTAGGGCCTGGGGG 61.179 72.222 18.53 0.00 38.35 5.40
624 625 1.549203 GCCCATGGCCAGGTATATTG 58.451 55.000 17.55 4.85 44.06 1.90
625 626 1.203050 GCCCATGGCCAGGTATATTGT 60.203 52.381 17.55 0.00 44.06 2.71
626 627 2.517959 CCCATGGCCAGGTATATTGTG 58.482 52.381 17.55 3.23 0.00 3.33
627 628 2.158475 CCCATGGCCAGGTATATTGTGT 60.158 50.000 17.55 0.00 0.00 3.72
628 629 3.073798 CCCATGGCCAGGTATATTGTGTA 59.926 47.826 17.55 0.00 0.00 2.90
629 630 4.072131 CCATGGCCAGGTATATTGTGTAC 58.928 47.826 17.55 0.00 0.00 2.90
630 631 3.849563 TGGCCAGGTATATTGTGTACC 57.150 47.619 0.00 0.00 41.55 3.34
640 641 6.091437 GGTATATTGTGTACCTATGACGAGC 58.909 44.000 0.00 0.00 38.82 5.03
641 642 2.953466 TTGTGTACCTATGACGAGCC 57.047 50.000 0.00 0.00 0.00 4.70
642 643 2.139323 TGTGTACCTATGACGAGCCT 57.861 50.000 0.00 0.00 0.00 4.58
643 644 2.022195 TGTGTACCTATGACGAGCCTC 58.978 52.381 0.00 0.00 0.00 4.70
644 645 1.002684 GTGTACCTATGACGAGCCTCG 60.003 57.143 13.52 13.52 46.93 4.63
645 646 1.134310 TGTACCTATGACGAGCCTCGA 60.134 52.381 22.80 0.00 43.74 4.04
646 647 1.532007 GTACCTATGACGAGCCTCGAG 59.468 57.143 22.80 5.13 43.74 4.04
647 648 1.284408 CCTATGACGAGCCTCGAGC 59.716 63.158 22.80 12.60 43.74 5.03
648 649 1.284408 CTATGACGAGCCTCGAGCC 59.716 63.158 22.80 9.79 43.74 4.70
649 650 1.448119 CTATGACGAGCCTCGAGCCA 61.448 60.000 22.80 15.06 43.74 4.75
650 651 0.823769 TATGACGAGCCTCGAGCCAT 60.824 55.000 22.80 20.26 43.74 4.40
651 652 2.279120 GACGAGCCTCGAGCCATG 60.279 66.667 22.80 0.00 43.74 3.66
652 653 3.069980 GACGAGCCTCGAGCCATGT 62.070 63.158 22.80 2.42 43.74 3.21
653 654 2.185350 CGAGCCTCGAGCCATGTT 59.815 61.111 8.82 0.00 43.74 2.71
654 655 1.448540 CGAGCCTCGAGCCATGTTT 60.449 57.895 8.82 0.00 43.74 2.83
655 656 0.179111 CGAGCCTCGAGCCATGTTTA 60.179 55.000 8.82 0.00 43.74 2.01
656 657 1.539065 CGAGCCTCGAGCCATGTTTAT 60.539 52.381 8.82 0.00 43.74 1.40
657 658 2.139118 GAGCCTCGAGCCATGTTTATC 58.861 52.381 6.99 0.00 45.47 1.75
658 659 0.861837 GCCTCGAGCCATGTTTATCG 59.138 55.000 6.99 0.00 36.54 2.92
659 660 1.502231 CCTCGAGCCATGTTTATCGG 58.498 55.000 6.99 0.00 35.91 4.18
660 661 1.502231 CTCGAGCCATGTTTATCGGG 58.498 55.000 0.00 0.00 35.91 5.14
661 662 0.531974 TCGAGCCATGTTTATCGGGC 60.532 55.000 0.00 0.00 46.77 6.13
665 666 1.523758 GCCATGTTTATCGGGCTAGG 58.476 55.000 0.00 0.00 43.09 3.02
666 667 1.071699 GCCATGTTTATCGGGCTAGGA 59.928 52.381 0.00 0.00 43.09 2.94
667 668 2.767505 CCATGTTTATCGGGCTAGGAC 58.232 52.381 0.00 0.00 0.00 3.85
668 669 2.104111 CCATGTTTATCGGGCTAGGACA 59.896 50.000 0.00 0.00 0.00 4.02
669 670 3.244561 CCATGTTTATCGGGCTAGGACAT 60.245 47.826 0.00 0.00 0.00 3.06
670 671 3.469008 TGTTTATCGGGCTAGGACATG 57.531 47.619 0.00 0.00 0.00 3.21
671 672 2.769663 TGTTTATCGGGCTAGGACATGT 59.230 45.455 0.00 0.00 0.00 3.21
672 673 3.962063 TGTTTATCGGGCTAGGACATGTA 59.038 43.478 0.00 0.00 0.00 2.29
673 674 4.406326 TGTTTATCGGGCTAGGACATGTAA 59.594 41.667 0.00 0.00 0.00 2.41
674 675 5.071250 TGTTTATCGGGCTAGGACATGTAAT 59.929 40.000 0.00 0.00 0.00 1.89
675 676 5.818678 TTATCGGGCTAGGACATGTAATT 57.181 39.130 0.00 0.00 0.00 1.40
676 677 4.706842 ATCGGGCTAGGACATGTAATTT 57.293 40.909 0.00 0.00 0.00 1.82
677 678 4.497291 TCGGGCTAGGACATGTAATTTT 57.503 40.909 0.00 0.00 0.00 1.82
678 679 4.850680 TCGGGCTAGGACATGTAATTTTT 58.149 39.130 0.00 0.00 0.00 1.94
709 710 6.767080 CGTTACAATTCACGGTCATTTATGA 58.233 36.000 0.00 0.00 32.58 2.15
710 711 6.899771 CGTTACAATTCACGGTCATTTATGAG 59.100 38.462 0.00 0.00 37.51 2.90
711 712 7.201487 CGTTACAATTCACGGTCATTTATGAGA 60.201 37.037 0.00 0.00 37.51 3.27
712 713 8.447833 GTTACAATTCACGGTCATTTATGAGAA 58.552 33.333 0.00 0.00 37.51 2.87
713 714 7.447374 ACAATTCACGGTCATTTATGAGAAA 57.553 32.000 0.00 0.00 37.51 2.52
714 715 7.881142 ACAATTCACGGTCATTTATGAGAAAA 58.119 30.769 0.00 0.00 37.51 2.29
715 716 8.023128 ACAATTCACGGTCATTTATGAGAAAAG 58.977 33.333 0.00 0.00 37.51 2.27
716 717 6.494893 TTCACGGTCATTTATGAGAAAAGG 57.505 37.500 0.00 0.00 37.51 3.11
717 718 5.800296 TCACGGTCATTTATGAGAAAAGGA 58.200 37.500 0.00 0.00 37.51 3.36
718 719 6.234920 TCACGGTCATTTATGAGAAAAGGAA 58.765 36.000 0.00 0.00 37.51 3.36
719 720 6.712998 TCACGGTCATTTATGAGAAAAGGAAA 59.287 34.615 0.00 0.00 37.51 3.13
720 721 7.229707 TCACGGTCATTTATGAGAAAAGGAAAA 59.770 33.333 0.00 0.00 37.51 2.29
721 722 7.326063 CACGGTCATTTATGAGAAAAGGAAAAC 59.674 37.037 0.00 0.00 37.51 2.43
722 723 7.013846 ACGGTCATTTATGAGAAAAGGAAAACA 59.986 33.333 0.00 0.00 37.51 2.83
723 724 8.028938 CGGTCATTTATGAGAAAAGGAAAACAT 58.971 33.333 0.00 0.00 37.51 2.71
724 725 9.143631 GGTCATTTATGAGAAAAGGAAAACATG 57.856 33.333 0.00 0.00 37.51 3.21
725 726 9.143631 GTCATTTATGAGAAAAGGAAAACATGG 57.856 33.333 0.00 0.00 37.51 3.66
726 727 8.313292 TCATTTATGAGAAAAGGAAAACATGGG 58.687 33.333 0.00 0.00 32.11 4.00
727 728 7.847711 TTTATGAGAAAAGGAAAACATGGGA 57.152 32.000 0.00 0.00 0.00 4.37
728 729 5.728637 ATGAGAAAAGGAAAACATGGGAC 57.271 39.130 0.00 0.00 0.00 4.46
729 730 3.895041 TGAGAAAAGGAAAACATGGGACC 59.105 43.478 0.00 0.00 0.00 4.46
730 731 4.152647 GAGAAAAGGAAAACATGGGACCT 58.847 43.478 0.00 0.00 0.00 3.85
731 732 3.897505 AGAAAAGGAAAACATGGGACCTG 59.102 43.478 0.00 0.00 0.00 4.00
732 733 3.328535 AAAGGAAAACATGGGACCTGT 57.671 42.857 0.00 0.00 0.00 4.00
733 734 2.292828 AGGAAAACATGGGACCTGTG 57.707 50.000 0.00 0.00 0.00 3.66
734 735 1.780309 AGGAAAACATGGGACCTGTGA 59.220 47.619 0.00 0.00 0.00 3.58
735 736 2.176798 AGGAAAACATGGGACCTGTGAA 59.823 45.455 0.00 0.00 0.00 3.18
756 757 5.126384 TGAACTGTAAAGGGAACAACAAAGG 59.874 40.000 0.00 0.00 0.00 3.11
813 814 1.038130 CGGGTCAACCAAACCAACCA 61.038 55.000 0.89 0.00 40.22 3.67
814 815 1.196012 GGGTCAACCAAACCAACCAA 58.804 50.000 0.89 0.00 38.62 3.67
929 944 1.002792 CCTCTGGCCCTCTCCTTCT 59.997 63.158 0.00 0.00 0.00 2.85
941 958 4.492303 CCTTCTCCCCGCCCCCTA 62.492 72.222 0.00 0.00 0.00 3.53
942 959 3.162154 CTTCTCCCCGCCCCCTAC 61.162 72.222 0.00 0.00 0.00 3.18
944 961 3.566016 TTCTCCCCGCCCCCTACAA 62.566 63.158 0.00 0.00 0.00 2.41
945 962 2.772622 CTCCCCGCCCCCTACAAT 60.773 66.667 0.00 0.00 0.00 2.71
946 963 1.460689 CTCCCCGCCCCCTACAATA 60.461 63.158 0.00 0.00 0.00 1.90
947 964 0.840722 CTCCCCGCCCCCTACAATAT 60.841 60.000 0.00 0.00 0.00 1.28
961 978 1.625818 ACAATATCCCTCTCATCCGCC 59.374 52.381 0.00 0.00 0.00 6.13
983 1000 0.452987 CCATTCCCACACAGCAATCG 59.547 55.000 0.00 0.00 0.00 3.34
1002 1027 4.796231 CCGCGTTCTCCACTCCCG 62.796 72.222 4.92 0.00 0.00 5.14
1023 1048 0.547075 TTCTCCCTCTCTCCGATCGT 59.453 55.000 15.09 0.00 0.00 3.73
1225 1265 0.327924 TCCTACGGGAAGGTGACGTA 59.672 55.000 0.00 0.00 41.53 3.57
1435 1475 3.827898 GTGCCGGCGAGCTAGTCT 61.828 66.667 23.90 0.00 0.00 3.24
1437 1477 4.273257 GCCGGCGAGCTAGTCTCC 62.273 72.222 12.58 1.39 38.62 3.71
1438 1478 2.517402 CCGGCGAGCTAGTCTCCT 60.517 66.667 9.30 0.00 38.62 3.69
1439 1479 1.227883 CCGGCGAGCTAGTCTCCTA 60.228 63.158 9.30 0.00 38.62 2.94
1440 1480 0.606944 CCGGCGAGCTAGTCTCCTAT 60.607 60.000 9.30 0.00 38.62 2.57
1443 1483 1.810151 GGCGAGCTAGTCTCCTATCTG 59.190 57.143 8.12 0.00 38.62 2.90
1480 1520 7.760340 GCTGTATGTTAGTTTAGTTCTAGCAGT 59.240 37.037 0.00 0.00 33.58 4.40
1492 1532 3.416119 TCTAGCAGTAATCGTCGTTGG 57.584 47.619 0.00 0.00 0.00 3.77
1617 1661 1.582968 CAGCCAGCAATGTGACCAC 59.417 57.895 0.00 0.00 0.00 4.16
1624 1668 0.739462 GCAATGTGACCACCGATCGA 60.739 55.000 18.66 0.00 0.00 3.59
1625 1669 0.999406 CAATGTGACCACCGATCGAC 59.001 55.000 18.66 6.02 0.00 4.20
1626 1670 0.108329 AATGTGACCACCGATCGACC 60.108 55.000 18.66 1.06 0.00 4.79
1627 1671 2.202570 GTGACCACCGATCGACCG 60.203 66.667 18.66 1.96 0.00 4.79
1638 1682 0.933509 GATCGACCGGCGTGATGTAC 60.934 60.000 16.00 0.00 41.80 2.90
1639 1683 1.381928 ATCGACCGGCGTGATGTACT 61.382 55.000 16.00 0.00 41.80 2.73
1640 1684 1.872234 CGACCGGCGTGATGTACTG 60.872 63.158 6.01 0.00 34.64 2.74
1641 1685 1.214589 GACCGGCGTGATGTACTGT 59.785 57.895 6.01 0.00 0.00 3.55
1642 1686 0.452987 GACCGGCGTGATGTACTGTA 59.547 55.000 6.01 0.00 0.00 2.74
1665 1709 8.598916 TGTAATTACAAGTAGAATCCCAAGTCA 58.401 33.333 15.92 0.00 32.40 3.41
1683 1727 7.192232 CCAAGTCAAAGAGTACCTACGTATAC 58.808 42.308 0.00 0.00 0.00 1.47
1690 1734 5.533482 AGAGTACCTACGTATACTGTACGG 58.467 45.833 12.45 0.00 44.38 4.02
1701 1745 1.472188 ACTGTACGGCCTCCTAGTTC 58.528 55.000 0.00 0.00 0.00 3.01
1899 1980 2.298158 ATTAGTCAGACCAGCCGGCG 62.298 60.000 23.20 16.10 34.57 6.46
1940 2027 2.180017 CTTACGTGCGCTACCCGT 59.820 61.111 9.73 14.03 39.71 5.28
1942 2029 3.665825 TTACGTGCGCTACCCGTCG 62.666 63.158 9.73 4.78 40.21 5.12
1972 2334 0.994995 CAGCTGAATTGGTCGTCTCG 59.005 55.000 8.42 0.00 0.00 4.04
1974 2336 1.696832 GCTGAATTGGTCGTCTCGGC 61.697 60.000 0.00 0.00 33.35 5.54
2077 2439 0.893727 GCCGACCCCAAGTCAAACAT 60.894 55.000 0.00 0.00 46.69 2.71
2078 2440 1.612199 GCCGACCCCAAGTCAAACATA 60.612 52.381 0.00 0.00 46.69 2.29
2079 2441 2.081462 CCGACCCCAAGTCAAACATAC 58.919 52.381 0.00 0.00 46.69 2.39
2080 2442 1.730064 CGACCCCAAGTCAAACATACG 59.270 52.381 0.00 0.00 46.69 3.06
2081 2443 2.610976 CGACCCCAAGTCAAACATACGA 60.611 50.000 0.00 0.00 46.69 3.43
2082 2444 3.000727 GACCCCAAGTCAAACATACGAG 58.999 50.000 0.00 0.00 45.55 4.18
2083 2445 2.370849 ACCCCAAGTCAAACATACGAGT 59.629 45.455 0.00 0.00 0.00 4.18
2084 2446 3.579586 ACCCCAAGTCAAACATACGAGTA 59.420 43.478 0.00 0.00 0.00 2.59
2085 2447 4.224370 ACCCCAAGTCAAACATACGAGTAT 59.776 41.667 0.00 0.00 0.00 2.12
2086 2448 4.570772 CCCCAAGTCAAACATACGAGTATG 59.429 45.833 18.55 18.55 46.24 2.39
2087 2449 4.034048 CCCAAGTCAAACATACGAGTATGC 59.966 45.833 19.69 6.47 45.06 3.14
2088 2450 4.629634 CCAAGTCAAACATACGAGTATGCA 59.370 41.667 19.69 0.00 45.06 3.96
2101 2464 5.777802 ACGAGTATGCAGATCAATAAGGAG 58.222 41.667 0.00 0.00 0.00 3.69
2160 2523 6.155393 TCAAAATAGGCCCGGTCAATTTAAAT 59.845 34.615 0.00 0.00 0.00 1.40
2172 2564 7.201401 CCGGTCAATTTAAATTTCAAATCCGAC 60.201 37.037 22.16 17.67 34.60 4.79
2187 2579 2.724454 TCCGACCACAACCAAAAAGAA 58.276 42.857 0.00 0.00 0.00 2.52
2209 2601 8.947055 AGAAACAAGTTTGCATAATTTTCACT 57.053 26.923 2.45 0.00 32.11 3.41
2236 2629 5.451937 CCTGATCGCAGAAAATACTAGTCCA 60.452 44.000 0.00 0.00 45.17 4.02
2251 2644 0.319813 GTCCAACAGCCCATGCAAAC 60.320 55.000 0.00 0.00 41.13 2.93
2294 2687 2.233305 ACTAGACCACCAATCCGAGT 57.767 50.000 0.00 0.00 0.00 4.18
2308 2701 1.210413 CGAGTCTCCACACTCACCG 59.790 63.158 1.78 0.00 42.75 4.94
2340 2733 0.391793 CTTCTCGGCCACCTCCTTTC 60.392 60.000 2.24 0.00 0.00 2.62
2677 3078 0.036952 CTCGCTTTGCCTTCTCCTCA 60.037 55.000 0.00 0.00 0.00 3.86
2720 3121 4.597507 ACCCTCTTCTAACCTTCATTGTCA 59.402 41.667 0.00 0.00 0.00 3.58
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.666317 ACGATCCCAAATTCCCAATCC 58.334 47.619 0.00 0.00 0.00 3.01
2 3 4.642885 TGTAACGATCCCAAATTCCCAATC 59.357 41.667 0.00 0.00 0.00 2.67
3 4 4.605183 TGTAACGATCCCAAATTCCCAAT 58.395 39.130 0.00 0.00 0.00 3.16
4 5 4.035612 TGTAACGATCCCAAATTCCCAA 57.964 40.909 0.00 0.00 0.00 4.12
6 7 5.592104 ATTTGTAACGATCCCAAATTCCC 57.408 39.130 0.00 0.00 35.79 3.97
7 8 6.310224 CACAATTTGTAACGATCCCAAATTCC 59.690 38.462 0.86 0.00 43.33 3.01
8 9 6.183360 GCACAATTTGTAACGATCCCAAATTC 60.183 38.462 0.86 4.44 43.33 2.17
9 10 5.637387 GCACAATTTGTAACGATCCCAAATT 59.363 36.000 0.86 11.34 45.02 1.82
10 11 5.167845 GCACAATTTGTAACGATCCCAAAT 58.832 37.500 0.86 0.00 39.72 2.32
11 12 4.038042 TGCACAATTTGTAACGATCCCAAA 59.962 37.500 0.86 0.00 33.09 3.28
12 13 3.570125 TGCACAATTTGTAACGATCCCAA 59.430 39.130 0.86 0.00 0.00 4.12
13 14 3.057876 GTGCACAATTTGTAACGATCCCA 60.058 43.478 13.17 0.00 0.00 4.37
14 15 3.498082 GTGCACAATTTGTAACGATCCC 58.502 45.455 13.17 0.00 0.00 3.85
15 16 3.057876 TGGTGCACAATTTGTAACGATCC 60.058 43.478 20.43 0.00 27.85 3.36
16 17 4.153958 TGGTGCACAATTTGTAACGATC 57.846 40.909 20.43 0.00 27.85 3.69
17 18 4.202060 TGTTGGTGCACAATTTGTAACGAT 60.202 37.500 20.43 0.00 41.95 3.73
18 19 3.128764 TGTTGGTGCACAATTTGTAACGA 59.871 39.130 20.43 0.00 41.95 3.85
19 20 3.439293 TGTTGGTGCACAATTTGTAACG 58.561 40.909 20.43 0.00 41.95 3.18
20 21 5.633182 CCTATGTTGGTGCACAATTTGTAAC 59.367 40.000 20.43 11.32 41.95 2.50
21 22 5.536538 TCCTATGTTGGTGCACAATTTGTAA 59.463 36.000 20.43 0.00 41.95 2.41
22 23 5.073428 TCCTATGTTGGTGCACAATTTGTA 58.927 37.500 20.43 3.27 41.95 2.41
23 24 3.894427 TCCTATGTTGGTGCACAATTTGT 59.106 39.130 20.43 0.00 41.95 2.83
24 25 4.517952 TCCTATGTTGGTGCACAATTTG 57.482 40.909 20.43 2.04 41.95 2.32
25 26 5.743636 ATTCCTATGTTGGTGCACAATTT 57.256 34.783 20.43 1.43 41.95 1.82
26 27 5.481105 CAATTCCTATGTTGGTGCACAATT 58.519 37.500 20.43 9.46 41.95 2.32
27 28 4.621274 GCAATTCCTATGTTGGTGCACAAT 60.621 41.667 20.43 8.83 41.95 2.71
28 29 3.305950 GCAATTCCTATGTTGGTGCACAA 60.306 43.478 20.43 3.78 36.54 3.33
29 30 2.230992 GCAATTCCTATGTTGGTGCACA 59.769 45.455 20.43 1.62 30.10 4.57
30 31 2.493278 AGCAATTCCTATGTTGGTGCAC 59.507 45.455 8.80 8.80 35.02 4.57
31 32 2.754552 GAGCAATTCCTATGTTGGTGCA 59.245 45.455 0.00 0.00 36.31 4.57
32 33 3.019564 AGAGCAATTCCTATGTTGGTGC 58.980 45.455 0.00 0.00 36.31 5.01
33 34 4.264253 TGAGAGCAATTCCTATGTTGGTG 58.736 43.478 0.00 0.00 36.31 4.17
34 35 4.574674 TGAGAGCAATTCCTATGTTGGT 57.425 40.909 0.00 0.00 38.61 3.67
35 36 6.349115 GCATATGAGAGCAATTCCTATGTTGG 60.349 42.308 6.97 0.00 0.00 3.77
36 37 6.349115 GGCATATGAGAGCAATTCCTATGTTG 60.349 42.308 6.97 0.00 0.00 3.33
37 38 5.709164 GGCATATGAGAGCAATTCCTATGTT 59.291 40.000 6.97 0.00 0.00 2.71
38 39 5.221986 TGGCATATGAGAGCAATTCCTATGT 60.222 40.000 6.97 0.00 0.00 2.29
39 40 5.250982 TGGCATATGAGAGCAATTCCTATG 58.749 41.667 6.97 0.00 0.00 2.23
40 41 5.509832 TGGCATATGAGAGCAATTCCTAT 57.490 39.130 6.97 0.00 0.00 2.57
41 42 4.980339 TGGCATATGAGAGCAATTCCTA 57.020 40.909 6.97 0.00 0.00 2.94
42 43 3.870538 TGGCATATGAGAGCAATTCCT 57.129 42.857 6.97 0.00 0.00 3.36
43 44 5.651139 ACATATGGCATATGAGAGCAATTCC 59.349 40.000 40.07 0.00 44.19 3.01
44 45 6.754702 ACATATGGCATATGAGAGCAATTC 57.245 37.500 40.07 0.00 44.19 2.17
45 46 6.152323 GGAACATATGGCATATGAGAGCAATT 59.848 38.462 40.07 26.82 44.19 2.32
46 47 5.651139 GGAACATATGGCATATGAGAGCAAT 59.349 40.000 40.07 21.55 44.19 3.56
47 48 5.005740 GGAACATATGGCATATGAGAGCAA 58.994 41.667 40.07 8.74 44.19 3.91
48 49 4.041938 TGGAACATATGGCATATGAGAGCA 59.958 41.667 40.07 19.39 44.19 4.26
49 50 4.582869 TGGAACATATGGCATATGAGAGC 58.417 43.478 40.07 27.33 44.19 4.09
50 51 8.797350 TTATTGGAACATATGGCATATGAGAG 57.203 34.615 40.07 22.47 44.19 3.20
51 52 9.758021 ATTTATTGGAACATATGGCATATGAGA 57.242 29.630 40.07 24.80 44.19 3.27
52 53 9.797556 CATTTATTGGAACATATGGCATATGAG 57.202 33.333 40.07 23.37 44.19 2.90
53 54 8.252417 GCATTTATTGGAACATATGGCATATGA 58.748 33.333 40.07 24.78 44.19 2.15
54 55 7.493320 GGCATTTATTGGAACATATGGCATATG 59.507 37.037 34.74 34.74 46.26 1.78
55 56 7.400915 AGGCATTTATTGGAACATATGGCATAT 59.599 33.333 14.20 14.20 39.39 1.78
56 57 6.725369 AGGCATTTATTGGAACATATGGCATA 59.275 34.615 10.07 10.07 39.39 3.14
57 58 5.544948 AGGCATTTATTGGAACATATGGCAT 59.455 36.000 4.88 4.88 39.39 4.40
58 59 4.900652 AGGCATTTATTGGAACATATGGCA 59.099 37.500 7.80 0.00 39.39 4.92
59 60 5.473066 AGGCATTTATTGGAACATATGGC 57.527 39.130 7.80 0.00 39.30 4.40
69 70 2.041701 CTCCCCCAAGGCATTTATTGG 58.958 52.381 0.00 0.00 44.64 3.16
70 71 1.413812 GCTCCCCCAAGGCATTTATTG 59.586 52.381 0.00 0.00 34.51 1.90
71 72 1.008206 TGCTCCCCCAAGGCATTTATT 59.992 47.619 0.00 0.00 34.51 1.40
72 73 0.636101 TGCTCCCCCAAGGCATTTAT 59.364 50.000 0.00 0.00 34.51 1.40
73 74 0.324275 GTGCTCCCCCAAGGCATTTA 60.324 55.000 0.00 0.00 38.27 1.40
74 75 1.610379 GTGCTCCCCCAAGGCATTT 60.610 57.895 0.00 0.00 38.27 2.32
75 76 2.037847 GTGCTCCCCCAAGGCATT 59.962 61.111 0.00 0.00 38.27 3.56
76 77 2.855770 TTGTGCTCCCCCAAGGCAT 61.856 57.895 0.00 0.00 38.27 4.40
77 78 3.506743 TTGTGCTCCCCCAAGGCA 61.507 61.111 0.00 0.00 34.51 4.75
78 79 2.991540 GTTGTGCTCCCCCAAGGC 60.992 66.667 0.00 0.00 34.51 4.35
79 80 1.604593 CAGTTGTGCTCCCCCAAGG 60.605 63.158 0.00 0.00 0.00 3.61
80 81 1.604593 CCAGTTGTGCTCCCCCAAG 60.605 63.158 0.00 0.00 0.00 3.61
81 82 2.520458 CCAGTTGTGCTCCCCCAA 59.480 61.111 0.00 0.00 0.00 4.12
82 83 4.284550 GCCAGTTGTGCTCCCCCA 62.285 66.667 0.00 0.00 0.00 4.96
83 84 3.590466 ATGCCAGTTGTGCTCCCCC 62.590 63.158 0.00 0.00 0.00 5.40
84 85 2.036256 ATGCCAGTTGTGCTCCCC 59.964 61.111 0.00 0.00 0.00 4.81
85 86 2.345760 CCATGCCAGTTGTGCTCCC 61.346 63.158 0.00 0.00 0.00 4.30
86 87 0.895100 TTCCATGCCAGTTGTGCTCC 60.895 55.000 0.00 0.00 0.00 4.70
87 88 0.961019 TTTCCATGCCAGTTGTGCTC 59.039 50.000 0.00 0.00 0.00 4.26
88 89 1.547372 GATTTCCATGCCAGTTGTGCT 59.453 47.619 0.00 0.00 0.00 4.40
89 90 1.273048 TGATTTCCATGCCAGTTGTGC 59.727 47.619 0.00 0.00 0.00 4.57
90 91 3.880047 ATGATTTCCATGCCAGTTGTG 57.120 42.857 0.00 0.00 33.39 3.33
91 92 7.844493 ATTATATGATTTCCATGCCAGTTGT 57.156 32.000 0.00 0.00 36.71 3.32
94 95 9.758021 TGATTATTATATGATTTCCATGCCAGT 57.242 29.630 0.00 0.00 36.71 4.00
151 152 9.265862 CTAGGGGATAAGATGACAATAGATCTT 57.734 37.037 0.00 0.00 41.01 2.40
152 153 8.628281 TCTAGGGGATAAGATGACAATAGATCT 58.372 37.037 0.00 0.00 0.00 2.75
153 154 8.830915 TCTAGGGGATAAGATGACAATAGATC 57.169 38.462 0.00 0.00 0.00 2.75
154 155 9.432982 GATCTAGGGGATAAGATGACAATAGAT 57.567 37.037 0.00 0.00 34.33 1.98
155 156 8.401894 TGATCTAGGGGATAAGATGACAATAGA 58.598 37.037 0.00 0.00 34.33 1.98
156 157 8.601047 TGATCTAGGGGATAAGATGACAATAG 57.399 38.462 0.00 0.00 34.33 1.73
157 158 8.180165 ACTGATCTAGGGGATAAGATGACAATA 58.820 37.037 0.00 0.00 36.59 1.90
158 159 7.021873 ACTGATCTAGGGGATAAGATGACAAT 58.978 38.462 0.00 0.00 36.59 2.71
159 160 6.385443 ACTGATCTAGGGGATAAGATGACAA 58.615 40.000 0.00 0.00 36.59 3.18
160 161 5.970289 ACTGATCTAGGGGATAAGATGACA 58.030 41.667 0.00 0.00 36.59 3.58
161 162 6.948886 TGTACTGATCTAGGGGATAAGATGAC 59.051 42.308 0.00 0.00 36.59 3.06
162 163 7.103745 TGTACTGATCTAGGGGATAAGATGA 57.896 40.000 0.00 0.00 36.59 2.92
163 164 7.453126 ACTTGTACTGATCTAGGGGATAAGATG 59.547 40.741 0.00 0.00 36.59 2.90
164 165 7.540183 ACTTGTACTGATCTAGGGGATAAGAT 58.460 38.462 0.00 0.00 36.59 2.40
165 166 6.923670 ACTTGTACTGATCTAGGGGATAAGA 58.076 40.000 0.00 0.00 36.59 2.10
166 167 7.437748 CAACTTGTACTGATCTAGGGGATAAG 58.562 42.308 0.00 0.00 38.58 1.73
167 168 6.326583 CCAACTTGTACTGATCTAGGGGATAA 59.673 42.308 0.00 0.00 34.33 1.75
168 169 5.839063 CCAACTTGTACTGATCTAGGGGATA 59.161 44.000 0.00 0.00 34.33 2.59
169 170 4.656112 CCAACTTGTACTGATCTAGGGGAT 59.344 45.833 0.00 0.00 37.37 3.85
170 171 4.030913 CCAACTTGTACTGATCTAGGGGA 58.969 47.826 0.00 0.00 0.00 4.81
171 172 4.030913 TCCAACTTGTACTGATCTAGGGG 58.969 47.826 0.00 0.00 0.00 4.79
172 173 5.677319 TTCCAACTTGTACTGATCTAGGG 57.323 43.478 0.00 0.00 0.00 3.53
173 174 7.278868 GTCATTTCCAACTTGTACTGATCTAGG 59.721 40.741 0.00 0.00 0.00 3.02
174 175 7.278868 GGTCATTTCCAACTTGTACTGATCTAG 59.721 40.741 0.00 0.00 0.00 2.43
175 176 7.103641 GGTCATTTCCAACTTGTACTGATCTA 58.896 38.462 0.00 0.00 0.00 1.98
176 177 5.940470 GGTCATTTCCAACTTGTACTGATCT 59.060 40.000 0.00 0.00 0.00 2.75
177 178 5.705441 TGGTCATTTCCAACTTGTACTGATC 59.295 40.000 0.00 0.00 34.24 2.92
178 179 5.630121 TGGTCATTTCCAACTTGTACTGAT 58.370 37.500 0.00 0.00 34.24 2.90
179 180 5.042463 TGGTCATTTCCAACTTGTACTGA 57.958 39.130 0.00 0.00 34.24 3.41
180 181 5.241506 ACATGGTCATTTCCAACTTGTACTG 59.758 40.000 0.00 0.00 41.09 2.74
181 182 5.385198 ACATGGTCATTTCCAACTTGTACT 58.615 37.500 0.00 0.00 41.09 2.73
182 183 5.705609 ACATGGTCATTTCCAACTTGTAC 57.294 39.130 0.00 0.00 41.09 2.90
183 184 5.242838 GGAACATGGTCATTTCCAACTTGTA 59.757 40.000 13.90 0.00 41.09 2.41
184 185 4.039124 GGAACATGGTCATTTCCAACTTGT 59.961 41.667 13.90 0.00 41.09 3.16
185 186 4.039004 TGGAACATGGTCATTTCCAACTTG 59.961 41.667 13.90 0.00 44.65 3.16
186 187 4.222336 TGGAACATGGTCATTTCCAACTT 58.778 39.130 13.90 0.00 44.65 2.66
187 188 3.843422 TGGAACATGGTCATTTCCAACT 58.157 40.909 13.90 0.00 44.65 3.16
190 191 3.055963 GCATTGGAACATGGTCATTTCCA 60.056 43.478 13.90 11.63 45.69 3.53
191 192 3.055963 TGCATTGGAACATGGTCATTTCC 60.056 43.478 13.90 9.00 39.30 3.13
192 193 4.191033 TGCATTGGAACATGGTCATTTC 57.809 40.909 13.90 0.00 39.30 2.17
193 194 4.829872 ATGCATTGGAACATGGTCATTT 57.170 36.364 13.90 0.00 39.30 2.32
194 195 4.468510 AGAATGCATTGGAACATGGTCATT 59.531 37.500 18.59 2.79 39.30 2.57
195 196 4.028131 AGAATGCATTGGAACATGGTCAT 58.972 39.130 18.59 0.00 39.30 3.06
196 197 3.193903 CAGAATGCATTGGAACATGGTCA 59.806 43.478 18.59 0.00 39.30 4.02
197 198 3.444742 TCAGAATGCATTGGAACATGGTC 59.555 43.478 18.59 0.73 34.11 4.02
198 199 3.433343 TCAGAATGCATTGGAACATGGT 58.567 40.909 18.59 0.00 34.11 3.55
199 200 4.665833 ATCAGAATGCATTGGAACATGG 57.334 40.909 18.59 0.00 34.11 3.66
200 201 6.183360 ACCTAATCAGAATGCATTGGAACATG 60.183 38.462 18.59 5.92 34.11 3.21
201 202 5.895534 ACCTAATCAGAATGCATTGGAACAT 59.104 36.000 18.59 7.70 34.11 2.71
202 203 5.125900 CACCTAATCAGAATGCATTGGAACA 59.874 40.000 18.59 5.71 34.76 3.18
203 204 5.357878 TCACCTAATCAGAATGCATTGGAAC 59.642 40.000 18.59 1.75 34.76 3.62
204 205 5.508567 TCACCTAATCAGAATGCATTGGAA 58.491 37.500 18.59 1.43 34.76 3.53
205 206 5.114764 TCACCTAATCAGAATGCATTGGA 57.885 39.130 18.59 14.38 34.76 3.53
206 207 5.125900 TGTTCACCTAATCAGAATGCATTGG 59.874 40.000 18.59 12.24 34.76 3.16
207 208 6.198650 TGTTCACCTAATCAGAATGCATTG 57.801 37.500 18.59 4.04 34.76 2.82
208 209 6.604396 TGATGTTCACCTAATCAGAATGCATT 59.396 34.615 12.83 12.83 34.76 3.56
209 210 6.039047 GTGATGTTCACCTAATCAGAATGCAT 59.961 38.462 0.00 0.00 41.37 3.96
210 211 5.355071 GTGATGTTCACCTAATCAGAATGCA 59.645 40.000 0.00 0.00 41.37 3.96
211 212 5.814783 GTGATGTTCACCTAATCAGAATGC 58.185 41.667 0.00 0.00 41.37 3.56
220 221 7.121611 TCGATAGTAACAGTGATGTTCACCTAA 59.878 37.037 0.00 0.00 42.46 2.69
221 222 6.600427 TCGATAGTAACAGTGATGTTCACCTA 59.400 38.462 0.00 0.00 42.46 3.08
222 223 5.417894 TCGATAGTAACAGTGATGTTCACCT 59.582 40.000 0.00 0.00 42.46 4.00
223 224 5.647589 TCGATAGTAACAGTGATGTTCACC 58.352 41.667 0.00 0.00 42.46 4.02
224 225 8.851960 TTATCGATAGTAACAGTGATGTTCAC 57.148 34.615 5.09 0.00 42.06 3.18
225 226 9.863845 TTTTATCGATAGTAACAGTGATGTTCA 57.136 29.630 5.09 0.00 33.59 3.18
249 250 1.398692 ACACGGCACCACATCTTTTT 58.601 45.000 0.00 0.00 0.00 1.94
250 251 1.066908 CAACACGGCACCACATCTTTT 59.933 47.619 0.00 0.00 0.00 2.27
251 252 0.667993 CAACACGGCACCACATCTTT 59.332 50.000 0.00 0.00 0.00 2.52
252 253 0.179032 TCAACACGGCACCACATCTT 60.179 50.000 0.00 0.00 0.00 2.40
253 254 0.179032 TTCAACACGGCACCACATCT 60.179 50.000 0.00 0.00 0.00 2.90
254 255 0.665835 TTTCAACACGGCACCACATC 59.334 50.000 0.00 0.00 0.00 3.06
255 256 1.327303 ATTTCAACACGGCACCACAT 58.673 45.000 0.00 0.00 0.00 3.21
256 257 1.876799 CTATTTCAACACGGCACCACA 59.123 47.619 0.00 0.00 0.00 4.17
257 258 2.147958 TCTATTTCAACACGGCACCAC 58.852 47.619 0.00 0.00 0.00 4.16
258 259 2.422597 CTCTATTTCAACACGGCACCA 58.577 47.619 0.00 0.00 0.00 4.17
259 260 1.737793 CCTCTATTTCAACACGGCACC 59.262 52.381 0.00 0.00 0.00 5.01
260 261 2.695359 TCCTCTATTTCAACACGGCAC 58.305 47.619 0.00 0.00 0.00 5.01
261 262 3.270027 CATCCTCTATTTCAACACGGCA 58.730 45.455 0.00 0.00 0.00 5.69
262 263 3.063997 CACATCCTCTATTTCAACACGGC 59.936 47.826 0.00 0.00 0.00 5.68
263 264 4.253685 ACACATCCTCTATTTCAACACGG 58.746 43.478 0.00 0.00 0.00 4.94
264 265 6.100004 AGTACACATCCTCTATTTCAACACG 58.900 40.000 0.00 0.00 0.00 4.49
265 266 8.251721 ACTAGTACACATCCTCTATTTCAACAC 58.748 37.037 0.00 0.00 0.00 3.32
266 267 8.362464 ACTAGTACACATCCTCTATTTCAACA 57.638 34.615 0.00 0.00 0.00 3.33
267 268 7.921745 GGACTAGTACACATCCTCTATTTCAAC 59.078 40.741 0.00 0.00 0.00 3.18
268 269 7.839705 AGGACTAGTACACATCCTCTATTTCAA 59.160 37.037 8.10 0.00 36.89 2.69
269 270 7.285629 CAGGACTAGTACACATCCTCTATTTCA 59.714 40.741 8.10 0.00 39.66 2.69
270 271 7.255660 CCAGGACTAGTACACATCCTCTATTTC 60.256 44.444 8.10 0.00 39.66 2.17
271 272 6.551601 CCAGGACTAGTACACATCCTCTATTT 59.448 42.308 8.10 0.00 39.66 1.40
272 273 6.071984 CCAGGACTAGTACACATCCTCTATT 58.928 44.000 8.10 0.00 39.66 1.73
273 274 5.636123 CCAGGACTAGTACACATCCTCTAT 58.364 45.833 8.10 0.00 39.66 1.98
274 275 4.689150 GCCAGGACTAGTACACATCCTCTA 60.689 50.000 8.10 0.00 39.66 2.43
275 276 3.904717 CCAGGACTAGTACACATCCTCT 58.095 50.000 8.10 0.00 39.66 3.69
276 277 2.362717 GCCAGGACTAGTACACATCCTC 59.637 54.545 8.10 0.00 39.66 3.71
277 278 2.389715 GCCAGGACTAGTACACATCCT 58.610 52.381 8.10 0.00 42.52 3.24
278 279 1.413077 GGCCAGGACTAGTACACATCC 59.587 57.143 8.10 0.00 0.00 3.51
279 280 2.108168 TGGCCAGGACTAGTACACATC 58.892 52.381 8.10 0.00 0.00 3.06
280 281 2.247699 TGGCCAGGACTAGTACACAT 57.752 50.000 8.10 0.00 0.00 3.21
281 282 2.108168 GATGGCCAGGACTAGTACACA 58.892 52.381 13.05 1.07 0.00 3.72
282 283 2.362717 GAGATGGCCAGGACTAGTACAC 59.637 54.545 13.05 0.00 0.00 2.90
283 284 2.245028 AGAGATGGCCAGGACTAGTACA 59.755 50.000 13.05 0.00 0.00 2.90
284 285 2.625790 CAGAGATGGCCAGGACTAGTAC 59.374 54.545 13.05 0.00 0.00 2.73
285 286 2.514160 TCAGAGATGGCCAGGACTAGTA 59.486 50.000 13.05 0.00 0.00 1.82
286 287 1.289231 TCAGAGATGGCCAGGACTAGT 59.711 52.381 13.05 0.00 0.00 2.57
287 288 1.686052 GTCAGAGATGGCCAGGACTAG 59.314 57.143 13.05 7.19 0.00 2.57
288 289 1.689575 GGTCAGAGATGGCCAGGACTA 60.690 57.143 13.05 0.00 32.88 2.59
289 290 0.980231 GGTCAGAGATGGCCAGGACT 60.980 60.000 13.05 10.74 32.88 3.85
290 291 1.524482 GGTCAGAGATGGCCAGGAC 59.476 63.158 13.05 13.02 32.88 3.85
291 292 1.690633 GGGTCAGAGATGGCCAGGA 60.691 63.158 13.05 0.20 34.69 3.86
292 293 2.914289 GGGTCAGAGATGGCCAGG 59.086 66.667 13.05 0.00 34.69 4.45
293 294 2.503061 CGGGTCAGAGATGGCCAG 59.497 66.667 13.05 0.00 34.69 4.85
294 295 3.083349 CCGGGTCAGAGATGGCCA 61.083 66.667 8.56 8.56 34.69 5.36
295 296 4.554036 GCCGGGTCAGAGATGGCC 62.554 72.222 2.18 0.00 39.83 5.36
296 297 3.453070 GAGCCGGGTCAGAGATGGC 62.453 68.421 28.27 0.00 46.07 4.40
297 298 1.760086 AGAGCCGGGTCAGAGATGG 60.760 63.158 33.52 0.00 0.00 3.51
298 299 1.326213 ACAGAGCCGGGTCAGAGATG 61.326 60.000 33.52 24.11 0.00 2.90
299 300 1.000993 ACAGAGCCGGGTCAGAGAT 59.999 57.895 33.52 11.55 0.00 2.75
300 301 1.679305 GACAGAGCCGGGTCAGAGA 60.679 63.158 33.52 0.00 34.22 3.10
301 302 2.888863 GACAGAGCCGGGTCAGAG 59.111 66.667 33.52 24.01 34.22 3.35
302 303 3.062466 CGACAGAGCCGGGTCAGA 61.062 66.667 33.52 0.00 33.66 3.27
303 304 4.135153 CCGACAGAGCCGGGTCAG 62.135 72.222 33.52 28.17 43.05 3.51
311 312 1.300481 GATTTTAGGGCCGACAGAGC 58.700 55.000 0.00 0.00 0.00 4.09
312 313 1.209504 TGGATTTTAGGGCCGACAGAG 59.790 52.381 0.00 0.00 0.00 3.35
313 314 1.209504 CTGGATTTTAGGGCCGACAGA 59.790 52.381 0.00 0.00 0.00 3.41
314 315 1.668419 CTGGATTTTAGGGCCGACAG 58.332 55.000 0.00 0.00 0.00 3.51
315 316 0.254747 CCTGGATTTTAGGGCCGACA 59.745 55.000 0.00 0.00 0.00 4.35
316 317 3.095922 CCTGGATTTTAGGGCCGAC 57.904 57.895 0.00 0.00 0.00 4.79
322 323 1.202940 GCCTAGGCCCTGGATTTTAGG 60.203 57.143 24.19 10.45 34.56 2.69
323 324 2.278332 GCCTAGGCCCTGGATTTTAG 57.722 55.000 24.19 0.33 34.56 1.85
362 363 2.677875 CTCAGGCCCAAACCCAGC 60.678 66.667 0.00 0.00 0.00 4.85
363 364 0.469892 AAACTCAGGCCCAAACCCAG 60.470 55.000 0.00 0.00 0.00 4.45
364 365 0.031616 AAAACTCAGGCCCAAACCCA 60.032 50.000 0.00 0.00 0.00 4.51
365 366 0.392706 CAAAACTCAGGCCCAAACCC 59.607 55.000 0.00 0.00 0.00 4.11
366 367 1.341209 CTCAAAACTCAGGCCCAAACC 59.659 52.381 0.00 0.00 0.00 3.27
367 368 1.269778 GCTCAAAACTCAGGCCCAAAC 60.270 52.381 0.00 0.00 0.00 2.93
368 369 1.039856 GCTCAAAACTCAGGCCCAAA 58.960 50.000 0.00 0.00 0.00 3.28
369 370 0.827507 GGCTCAAAACTCAGGCCCAA 60.828 55.000 0.00 0.00 37.12 4.12
370 371 1.228552 GGCTCAAAACTCAGGCCCA 60.229 57.895 0.00 0.00 37.12 5.36
371 372 3.686760 GGCTCAAAACTCAGGCCC 58.313 61.111 0.00 0.00 37.12 5.80
373 374 1.527433 GGTGGGCTCAAAACTCAGGC 61.527 60.000 0.00 0.00 34.44 4.85
374 375 0.178992 TGGTGGGCTCAAAACTCAGG 60.179 55.000 0.00 0.00 0.00 3.86
375 376 1.242076 CTGGTGGGCTCAAAACTCAG 58.758 55.000 0.00 0.00 0.00 3.35
376 377 0.823356 GCTGGTGGGCTCAAAACTCA 60.823 55.000 0.00 0.00 0.00 3.41
377 378 0.823356 TGCTGGTGGGCTCAAAACTC 60.823 55.000 0.00 0.00 0.00 3.01
378 379 0.825010 CTGCTGGTGGGCTCAAAACT 60.825 55.000 0.00 0.00 0.00 2.66
379 380 1.662044 CTGCTGGTGGGCTCAAAAC 59.338 57.895 0.00 0.00 0.00 2.43
380 381 1.531365 CCTGCTGGTGGGCTCAAAA 60.531 57.895 0.51 0.00 0.00 2.44
381 382 2.115910 CCTGCTGGTGGGCTCAAA 59.884 61.111 0.51 0.00 0.00 2.69
382 383 3.970410 CCCTGCTGGTGGGCTCAA 61.970 66.667 9.00 0.00 37.99 3.02
389 390 3.736224 ATCCAGGCCCTGCTGGTG 61.736 66.667 4.81 0.37 41.28 4.17
390 391 3.736224 CATCCAGGCCCTGCTGGT 61.736 66.667 4.81 0.00 41.28 4.00
391 392 4.517934 CCATCCAGGCCCTGCTGG 62.518 72.222 14.11 14.11 41.85 4.85
392 393 4.517934 CCCATCCAGGCCCTGCTG 62.518 72.222 4.81 4.88 35.39 4.41
394 395 3.607084 AAACCCATCCAGGCCCTGC 62.607 63.158 4.81 0.00 35.39 4.85
395 396 1.683365 CAAACCCATCCAGGCCCTG 60.683 63.158 2.91 2.91 35.39 4.45
396 397 2.772924 CAAACCCATCCAGGCCCT 59.227 61.111 0.00 0.00 35.39 5.19
397 398 2.364186 CCAAACCCATCCAGGCCC 60.364 66.667 0.00 0.00 35.39 5.80
398 399 2.364186 CCCAAACCCATCCAGGCC 60.364 66.667 0.00 0.00 35.39 5.19
399 400 3.076916 GCCCAAACCCATCCAGGC 61.077 66.667 0.00 0.00 35.39 4.85
400 401 1.079073 AAGCCCAAACCCATCCAGG 59.921 57.895 0.00 0.00 37.03 4.45
401 402 1.259840 CCAAGCCCAAACCCATCCAG 61.260 60.000 0.00 0.00 0.00 3.86
402 403 1.229145 CCAAGCCCAAACCCATCCA 60.229 57.895 0.00 0.00 0.00 3.41
403 404 2.659063 GCCAAGCCCAAACCCATCC 61.659 63.158 0.00 0.00 0.00 3.51
404 405 1.266867 ATGCCAAGCCCAAACCCATC 61.267 55.000 0.00 0.00 0.00 3.51
405 406 0.042431 TATGCCAAGCCCAAACCCAT 59.958 50.000 0.00 0.00 0.00 4.00
406 407 0.042431 ATATGCCAAGCCCAAACCCA 59.958 50.000 0.00 0.00 0.00 4.51
407 408 1.134431 CAATATGCCAAGCCCAAACCC 60.134 52.381 0.00 0.00 0.00 4.11
408 409 1.134431 CCAATATGCCAAGCCCAAACC 60.134 52.381 0.00 0.00 0.00 3.27
409 410 1.743431 GCCAATATGCCAAGCCCAAAC 60.743 52.381 0.00 0.00 0.00 2.93
410 411 0.540923 GCCAATATGCCAAGCCCAAA 59.459 50.000 0.00 0.00 0.00 3.28
411 412 0.616964 TGCCAATATGCCAAGCCCAA 60.617 50.000 0.00 0.00 0.00 4.12
412 413 0.398806 ATGCCAATATGCCAAGCCCA 60.399 50.000 0.00 0.00 0.00 5.36
413 414 0.760572 AATGCCAATATGCCAAGCCC 59.239 50.000 0.00 0.00 0.00 5.19
414 415 2.614983 CAAAATGCCAATATGCCAAGCC 59.385 45.455 0.00 0.00 0.00 4.35
415 416 3.533547 TCAAAATGCCAATATGCCAAGC 58.466 40.909 0.00 0.00 0.00 4.01
416 417 4.124238 CCTCAAAATGCCAATATGCCAAG 58.876 43.478 0.00 0.00 0.00 3.61
417 418 3.773667 TCCTCAAAATGCCAATATGCCAA 59.226 39.130 0.00 0.00 0.00 4.52
418 419 3.372897 TCCTCAAAATGCCAATATGCCA 58.627 40.909 0.00 0.00 0.00 4.92
419 420 4.099881 TCTTCCTCAAAATGCCAATATGCC 59.900 41.667 0.00 0.00 0.00 4.40
420 421 5.266733 TCTTCCTCAAAATGCCAATATGC 57.733 39.130 0.00 0.00 0.00 3.14
421 422 5.738208 GCCTCTTCCTCAAAATGCCAATATG 60.738 44.000 0.00 0.00 0.00 1.78
422 423 4.343239 GCCTCTTCCTCAAAATGCCAATAT 59.657 41.667 0.00 0.00 0.00 1.28
423 424 3.701040 GCCTCTTCCTCAAAATGCCAATA 59.299 43.478 0.00 0.00 0.00 1.90
424 425 2.498885 GCCTCTTCCTCAAAATGCCAAT 59.501 45.455 0.00 0.00 0.00 3.16
425 426 1.895131 GCCTCTTCCTCAAAATGCCAA 59.105 47.619 0.00 0.00 0.00 4.52
426 427 1.549203 GCCTCTTCCTCAAAATGCCA 58.451 50.000 0.00 0.00 0.00 4.92
427 428 0.820226 GGCCTCTTCCTCAAAATGCC 59.180 55.000 0.00 0.00 0.00 4.40
428 429 0.820226 GGGCCTCTTCCTCAAAATGC 59.180 55.000 0.84 0.00 0.00 3.56
429 430 2.097825 CTGGGCCTCTTCCTCAAAATG 58.902 52.381 4.53 0.00 0.00 2.32
430 431 1.618074 GCTGGGCCTCTTCCTCAAAAT 60.618 52.381 4.53 0.00 0.00 1.82
431 432 0.251341 GCTGGGCCTCTTCCTCAAAA 60.251 55.000 4.53 0.00 0.00 2.44
432 433 1.380302 GCTGGGCCTCTTCCTCAAA 59.620 57.895 4.53 0.00 0.00 2.69
433 434 2.606587 GGCTGGGCCTCTTCCTCAA 61.607 63.158 4.53 0.00 46.69 3.02
434 435 3.011517 GGCTGGGCCTCTTCCTCA 61.012 66.667 4.53 0.00 46.69 3.86
445 446 3.338250 TTAGGGCTGTGGGCTGGG 61.338 66.667 0.00 0.00 41.46 4.45
446 447 2.273449 CTTAGGGCTGTGGGCTGG 59.727 66.667 0.00 0.00 41.46 4.85
447 448 2.439156 GCTTAGGGCTGTGGGCTG 60.439 66.667 0.00 0.00 41.46 4.85
448 449 3.732849 GGCTTAGGGCTGTGGGCT 61.733 66.667 0.00 0.00 41.46 5.19
449 450 4.822628 GGGCTTAGGGCTGTGGGC 62.823 72.222 0.00 0.00 41.46 5.36
450 451 1.279025 TTAGGGCTTAGGGCTGTGGG 61.279 60.000 0.00 0.00 41.46 4.61
451 452 0.181350 CTTAGGGCTTAGGGCTGTGG 59.819 60.000 0.00 0.00 41.46 4.17
452 453 0.181350 CCTTAGGGCTTAGGGCTGTG 59.819 60.000 0.00 0.00 41.46 3.66
453 454 0.988678 CCCTTAGGGCTTAGGGCTGT 60.989 60.000 3.52 0.00 44.40 4.40
454 455 1.839894 CCCTTAGGGCTTAGGGCTG 59.160 63.158 3.52 0.00 44.40 4.85
455 456 4.420741 CCCTTAGGGCTTAGGGCT 57.579 61.111 3.52 0.00 44.40 5.19
465 466 0.332972 AGCCCTGAAAAGCCCTTAGG 59.667 55.000 0.00 0.00 0.00 2.69
466 467 2.222227 AAGCCCTGAAAAGCCCTTAG 57.778 50.000 0.00 0.00 0.00 2.18
467 468 2.694616 AAAGCCCTGAAAAGCCCTTA 57.305 45.000 0.00 0.00 0.00 2.69
468 469 1.806496 AAAAGCCCTGAAAAGCCCTT 58.194 45.000 0.00 0.00 0.00 3.95
469 470 1.806496 AAAAAGCCCTGAAAAGCCCT 58.194 45.000 0.00 0.00 0.00 5.19
470 471 2.367241 TGTAAAAAGCCCTGAAAAGCCC 59.633 45.455 0.00 0.00 0.00 5.19
471 472 3.744238 TGTAAAAAGCCCTGAAAAGCC 57.256 42.857 0.00 0.00 0.00 4.35
472 473 4.881920 TCATGTAAAAAGCCCTGAAAAGC 58.118 39.130 0.00 0.00 0.00 3.51
473 474 5.870978 CCATCATGTAAAAAGCCCTGAAAAG 59.129 40.000 0.00 0.00 0.00 2.27
474 475 5.279910 CCCATCATGTAAAAAGCCCTGAAAA 60.280 40.000 0.00 0.00 0.00 2.29
475 476 4.222588 CCCATCATGTAAAAAGCCCTGAAA 59.777 41.667 0.00 0.00 0.00 2.69
476 477 3.768757 CCCATCATGTAAAAAGCCCTGAA 59.231 43.478 0.00 0.00 0.00 3.02
477 478 3.364549 CCCATCATGTAAAAAGCCCTGA 58.635 45.455 0.00 0.00 0.00 3.86
478 479 2.159057 GCCCATCATGTAAAAAGCCCTG 60.159 50.000 0.00 0.00 0.00 4.45
479 480 2.110578 GCCCATCATGTAAAAAGCCCT 58.889 47.619 0.00 0.00 0.00 5.19
480 481 1.138859 GGCCCATCATGTAAAAAGCCC 59.861 52.381 0.00 0.00 32.93 5.19
481 482 1.138859 GGGCCCATCATGTAAAAAGCC 59.861 52.381 19.95 0.00 38.45 4.35
482 483 1.202405 CGGGCCCATCATGTAAAAAGC 60.202 52.381 24.92 0.00 0.00 3.51
483 484 1.408702 CCGGGCCCATCATGTAAAAAG 59.591 52.381 24.92 0.00 0.00 2.27
484 485 1.479709 CCGGGCCCATCATGTAAAAA 58.520 50.000 24.92 0.00 0.00 1.94
485 486 0.396417 CCCGGGCCCATCATGTAAAA 60.396 55.000 24.92 0.00 0.00 1.52
486 487 1.228793 CCCGGGCCCATCATGTAAA 59.771 57.895 24.92 0.00 0.00 2.01
487 488 1.576368 AACCCGGGCCCATCATGTAA 61.576 55.000 24.08 0.00 0.00 2.41
488 489 2.004120 AACCCGGGCCCATCATGTA 61.004 57.895 24.08 0.00 0.00 2.29
489 490 3.346734 AACCCGGGCCCATCATGT 61.347 61.111 24.08 7.76 0.00 3.21
490 491 2.834505 CAACCCGGGCCCATCATG 60.835 66.667 24.08 11.52 0.00 3.07
491 492 4.141876 CCAACCCGGGCCCATCAT 62.142 66.667 24.08 1.13 0.00 2.45
500 501 1.112916 ACTTTTCAAGCCCAACCCGG 61.113 55.000 0.00 0.00 0.00 5.73
501 502 1.539827 CTACTTTTCAAGCCCAACCCG 59.460 52.381 0.00 0.00 0.00 5.28
502 503 1.893137 CCTACTTTTCAAGCCCAACCC 59.107 52.381 0.00 0.00 0.00 4.11
503 504 1.272490 GCCTACTTTTCAAGCCCAACC 59.728 52.381 0.00 0.00 0.00 3.77
504 505 1.272490 GGCCTACTTTTCAAGCCCAAC 59.728 52.381 0.00 0.00 37.66 3.77
505 506 1.627864 GGCCTACTTTTCAAGCCCAA 58.372 50.000 0.00 0.00 37.66 4.12
506 507 3.356814 GGCCTACTTTTCAAGCCCA 57.643 52.632 0.00 0.00 37.66 5.36
508 509 0.322187 TCGGGCCTACTTTTCAAGCC 60.322 55.000 0.84 0.00 43.09 4.35
509 510 1.401905 CATCGGGCCTACTTTTCAAGC 59.598 52.381 0.84 0.00 0.00 4.01
510 511 2.017049 CCATCGGGCCTACTTTTCAAG 58.983 52.381 0.84 0.00 0.00 3.02
511 512 1.353022 ACCATCGGGCCTACTTTTCAA 59.647 47.619 0.84 0.00 37.90 2.69
512 513 0.988832 ACCATCGGGCCTACTTTTCA 59.011 50.000 0.84 0.00 37.90 2.69
513 514 2.484947 CCTACCATCGGGCCTACTTTTC 60.485 54.545 0.84 0.00 37.90 2.29
514 515 1.489230 CCTACCATCGGGCCTACTTTT 59.511 52.381 0.84 0.00 37.90 2.27
515 516 1.129058 CCTACCATCGGGCCTACTTT 58.871 55.000 0.84 0.00 37.90 2.66
516 517 0.763223 CCCTACCATCGGGCCTACTT 60.763 60.000 0.84 0.00 37.90 2.24
517 518 1.152312 CCCTACCATCGGGCCTACT 60.152 63.158 0.84 0.00 37.90 2.57
518 519 3.468063 CCCTACCATCGGGCCTAC 58.532 66.667 0.84 0.00 37.90 3.18
523 524 3.560251 CCAGGCCCTACCATCGGG 61.560 72.222 0.00 0.00 44.89 5.14
524 525 3.560251 CCCAGGCCCTACCATCGG 61.560 72.222 0.00 0.00 43.14 4.18
525 526 3.560251 CCCCAGGCCCTACCATCG 61.560 72.222 0.00 0.00 43.14 3.84
526 527 3.178611 CCCCCAGGCCCTACCATC 61.179 72.222 0.00 0.00 43.14 3.51
606 607 2.158475 ACACAATATACCTGGCCATGGG 60.158 50.000 20.97 16.10 0.00 4.00
607 608 3.228188 ACACAATATACCTGGCCATGG 57.772 47.619 5.51 13.05 0.00 3.66
608 609 4.072131 GGTACACAATATACCTGGCCATG 58.928 47.826 5.51 6.06 39.30 3.66
609 610 4.367039 GGTACACAATATACCTGGCCAT 57.633 45.455 5.51 0.00 39.30 4.40
610 611 3.849563 GGTACACAATATACCTGGCCA 57.150 47.619 4.71 4.71 39.30 5.36
616 617 6.091437 GCTCGTCATAGGTACACAATATACC 58.909 44.000 0.00 0.00 42.22 2.73
617 618 6.072064 AGGCTCGTCATAGGTACACAATATAC 60.072 42.308 0.00 0.00 0.00 1.47
618 619 6.008331 AGGCTCGTCATAGGTACACAATATA 58.992 40.000 0.00 0.00 0.00 0.86
619 620 4.833380 AGGCTCGTCATAGGTACACAATAT 59.167 41.667 0.00 0.00 0.00 1.28
620 621 4.212716 AGGCTCGTCATAGGTACACAATA 58.787 43.478 0.00 0.00 0.00 1.90
621 622 3.031736 AGGCTCGTCATAGGTACACAAT 58.968 45.455 0.00 0.00 0.00 2.71
622 623 2.426024 GAGGCTCGTCATAGGTACACAA 59.574 50.000 0.00 0.00 0.00 3.33
623 624 2.022195 GAGGCTCGTCATAGGTACACA 58.978 52.381 0.00 0.00 0.00 3.72
624 625 1.002684 CGAGGCTCGTCATAGGTACAC 60.003 57.143 27.92 0.00 34.72 2.90
625 626 1.134310 TCGAGGCTCGTCATAGGTACA 60.134 52.381 33.31 10.05 41.35 2.90
626 627 1.532007 CTCGAGGCTCGTCATAGGTAC 59.468 57.143 33.31 0.00 41.35 3.34
627 628 1.880271 CTCGAGGCTCGTCATAGGTA 58.120 55.000 33.31 13.12 41.35 3.08
628 629 1.448922 GCTCGAGGCTCGTCATAGGT 61.449 60.000 33.31 0.00 41.35 3.08
629 630 1.284408 GCTCGAGGCTCGTCATAGG 59.716 63.158 33.31 18.51 41.35 2.57
630 631 1.284408 GGCTCGAGGCTCGTCATAG 59.716 63.158 33.31 24.38 41.35 2.23
631 632 0.823769 ATGGCTCGAGGCTCGTCATA 60.824 55.000 35.12 19.86 41.35 2.15
632 633 2.130426 ATGGCTCGAGGCTCGTCAT 61.130 57.895 35.12 28.28 41.35 3.06
633 634 2.755876 ATGGCTCGAGGCTCGTCA 60.756 61.111 35.12 27.52 41.35 4.35
634 635 2.279120 CATGGCTCGAGGCTCGTC 60.279 66.667 35.12 25.05 41.35 4.20
635 636 2.172483 AAACATGGCTCGAGGCTCGT 62.172 55.000 35.12 28.15 41.35 4.18
636 637 0.179111 TAAACATGGCTCGAGGCTCG 60.179 55.000 35.12 30.10 42.10 5.03
637 638 2.139118 GATAAACATGGCTCGAGGCTC 58.861 52.381 35.12 20.79 41.69 4.70
638 639 1.539065 CGATAAACATGGCTCGAGGCT 60.539 52.381 35.12 19.85 41.69 4.58
639 640 0.861837 CGATAAACATGGCTCGAGGC 59.138 55.000 30.53 30.53 41.50 4.70
640 641 1.502231 CCGATAAACATGGCTCGAGG 58.498 55.000 15.58 0.00 33.07 4.63
641 642 1.502231 CCCGATAAACATGGCTCGAG 58.498 55.000 8.45 8.45 33.07 4.04
642 643 0.531974 GCCCGATAAACATGGCTCGA 60.532 55.000 0.00 0.00 40.77 4.04
643 644 1.941812 GCCCGATAAACATGGCTCG 59.058 57.895 0.00 0.00 40.77 5.03
646 647 1.071699 TCCTAGCCCGATAAACATGGC 59.928 52.381 0.00 0.00 44.35 4.40
647 648 2.104111 TGTCCTAGCCCGATAAACATGG 59.896 50.000 0.00 0.00 0.00 3.66
648 649 3.469008 TGTCCTAGCCCGATAAACATG 57.531 47.619 0.00 0.00 0.00 3.21
649 650 3.391296 ACATGTCCTAGCCCGATAAACAT 59.609 43.478 0.00 0.00 0.00 2.71
650 651 2.769663 ACATGTCCTAGCCCGATAAACA 59.230 45.455 0.00 0.00 0.00 2.83
651 652 3.470645 ACATGTCCTAGCCCGATAAAC 57.529 47.619 0.00 0.00 0.00 2.01
652 653 5.818678 ATTACATGTCCTAGCCCGATAAA 57.181 39.130 0.00 0.00 0.00 1.40
653 654 5.818678 AATTACATGTCCTAGCCCGATAA 57.181 39.130 0.00 0.00 0.00 1.75
654 655 5.818678 AAATTACATGTCCTAGCCCGATA 57.181 39.130 0.00 0.00 0.00 2.92
655 656 4.706842 AAATTACATGTCCTAGCCCGAT 57.293 40.909 0.00 0.00 0.00 4.18
656 657 4.497291 AAAATTACATGTCCTAGCCCGA 57.503 40.909 0.00 0.00 0.00 5.14
685 686 6.767080 TCATAAATGACCGTGAATTGTAACG 58.233 36.000 0.00 0.00 39.48 3.18
686 687 7.970384 TCTCATAAATGACCGTGAATTGTAAC 58.030 34.615 0.00 0.00 32.50 2.50
687 688 8.554835 TTCTCATAAATGACCGTGAATTGTAA 57.445 30.769 0.00 0.00 32.50 2.41
688 689 8.554835 TTTCTCATAAATGACCGTGAATTGTA 57.445 30.769 0.00 0.00 32.50 2.41
689 690 7.447374 TTTCTCATAAATGACCGTGAATTGT 57.553 32.000 0.00 0.00 32.50 2.71
690 691 7.485913 CCTTTTCTCATAAATGACCGTGAATTG 59.514 37.037 0.00 0.00 32.50 2.32
691 692 7.393234 TCCTTTTCTCATAAATGACCGTGAATT 59.607 33.333 0.00 0.00 32.50 2.17
692 693 6.884295 TCCTTTTCTCATAAATGACCGTGAAT 59.116 34.615 0.00 0.00 32.50 2.57
693 694 6.234920 TCCTTTTCTCATAAATGACCGTGAA 58.765 36.000 0.00 0.00 32.50 3.18
694 695 5.800296 TCCTTTTCTCATAAATGACCGTGA 58.200 37.500 0.00 0.00 32.50 4.35
695 696 6.494893 TTCCTTTTCTCATAAATGACCGTG 57.505 37.500 0.00 0.00 32.50 4.94
696 697 7.013846 TGTTTTCCTTTTCTCATAAATGACCGT 59.986 33.333 0.00 0.00 32.50 4.83
697 698 7.367285 TGTTTTCCTTTTCTCATAAATGACCG 58.633 34.615 0.00 0.00 32.50 4.79
698 699 9.143631 CATGTTTTCCTTTTCTCATAAATGACC 57.856 33.333 0.00 0.00 32.50 4.02
699 700 9.143631 CCATGTTTTCCTTTTCTCATAAATGAC 57.856 33.333 0.00 0.00 32.50 3.06
700 701 8.313292 CCCATGTTTTCCTTTTCTCATAAATGA 58.687 33.333 0.00 0.00 35.16 2.57
701 702 8.313292 TCCCATGTTTTCCTTTTCTCATAAATG 58.687 33.333 0.00 0.00 0.00 2.32
702 703 8.314021 GTCCCATGTTTTCCTTTTCTCATAAAT 58.686 33.333 0.00 0.00 0.00 1.40
703 704 7.256154 GGTCCCATGTTTTCCTTTTCTCATAAA 60.256 37.037 0.00 0.00 0.00 1.40
704 705 6.210584 GGTCCCATGTTTTCCTTTTCTCATAA 59.789 38.462 0.00 0.00 0.00 1.90
705 706 5.714806 GGTCCCATGTTTTCCTTTTCTCATA 59.285 40.000 0.00 0.00 0.00 2.15
706 707 4.528206 GGTCCCATGTTTTCCTTTTCTCAT 59.472 41.667 0.00 0.00 0.00 2.90
707 708 3.895041 GGTCCCATGTTTTCCTTTTCTCA 59.105 43.478 0.00 0.00 0.00 3.27
708 709 4.021981 CAGGTCCCATGTTTTCCTTTTCTC 60.022 45.833 0.00 0.00 0.00 2.87
709 710 3.897505 CAGGTCCCATGTTTTCCTTTTCT 59.102 43.478 0.00 0.00 0.00 2.52
710 711 3.641436 ACAGGTCCCATGTTTTCCTTTTC 59.359 43.478 0.00 0.00 0.00 2.29
711 712 3.387699 CACAGGTCCCATGTTTTCCTTTT 59.612 43.478 0.00 0.00 0.00 2.27
712 713 2.965147 CACAGGTCCCATGTTTTCCTTT 59.035 45.455 0.00 0.00 0.00 3.11
713 714 2.176798 TCACAGGTCCCATGTTTTCCTT 59.823 45.455 0.00 0.00 0.00 3.36
714 715 1.780309 TCACAGGTCCCATGTTTTCCT 59.220 47.619 0.00 0.00 0.00 3.36
715 716 2.286365 TCACAGGTCCCATGTTTTCC 57.714 50.000 0.00 0.00 0.00 3.13
716 717 3.004734 CAGTTCACAGGTCCCATGTTTTC 59.995 47.826 0.00 0.00 0.00 2.29
717 718 2.958355 CAGTTCACAGGTCCCATGTTTT 59.042 45.455 0.00 0.00 0.00 2.43
718 719 2.091885 ACAGTTCACAGGTCCCATGTTT 60.092 45.455 0.00 0.00 0.00 2.83
719 720 1.494721 ACAGTTCACAGGTCCCATGTT 59.505 47.619 0.00 0.00 0.00 2.71
720 721 1.140312 ACAGTTCACAGGTCCCATGT 58.860 50.000 0.00 0.00 0.00 3.21
721 722 3.417069 TTACAGTTCACAGGTCCCATG 57.583 47.619 0.00 0.00 0.00 3.66
722 723 3.244911 CCTTTACAGTTCACAGGTCCCAT 60.245 47.826 0.00 0.00 0.00 4.00
723 724 2.105821 CCTTTACAGTTCACAGGTCCCA 59.894 50.000 0.00 0.00 0.00 4.37
724 725 2.552373 CCCTTTACAGTTCACAGGTCCC 60.552 54.545 0.00 0.00 0.00 4.46
725 726 2.370849 TCCCTTTACAGTTCACAGGTCC 59.629 50.000 0.00 0.00 0.00 4.46
726 727 3.764237 TCCCTTTACAGTTCACAGGTC 57.236 47.619 0.00 0.00 0.00 3.85
727 728 3.201266 TGTTCCCTTTACAGTTCACAGGT 59.799 43.478 0.00 0.00 0.00 4.00
728 729 3.815809 TGTTCCCTTTACAGTTCACAGG 58.184 45.455 0.00 0.00 0.00 4.00
729 730 4.638421 TGTTGTTCCCTTTACAGTTCACAG 59.362 41.667 0.00 0.00 0.00 3.66
730 731 4.590918 TGTTGTTCCCTTTACAGTTCACA 58.409 39.130 0.00 0.00 0.00 3.58
731 732 5.570234 TTGTTGTTCCCTTTACAGTTCAC 57.430 39.130 0.00 0.00 0.00 3.18
732 733 5.126384 CCTTTGTTGTTCCCTTTACAGTTCA 59.874 40.000 0.00 0.00 0.00 3.18
733 734 5.451381 CCCTTTGTTGTTCCCTTTACAGTTC 60.451 44.000 0.00 0.00 0.00 3.01
734 735 4.404394 CCCTTTGTTGTTCCCTTTACAGTT 59.596 41.667 0.00 0.00 0.00 3.16
735 736 3.958147 CCCTTTGTTGTTCCCTTTACAGT 59.042 43.478 0.00 0.00 0.00 3.55
756 757 2.125391 GCCGGTTTCGTAGGGTCC 60.125 66.667 1.90 0.00 33.95 4.46
797 798 1.134640 GGGTTGGTTGGTTTGGTTGAC 60.135 52.381 0.00 0.00 0.00 3.18
813 814 4.626402 TCGGTCCTCCCACGGGTT 62.626 66.667 1.07 0.00 36.47 4.11
814 815 4.626402 TTCGGTCCTCCCACGGGT 62.626 66.667 1.07 0.00 36.47 5.28
916 931 2.770475 GGGGAGAAGGAGAGGGCC 60.770 72.222 0.00 0.00 0.00 5.80
917 932 3.157949 CGGGGAGAAGGAGAGGGC 61.158 72.222 0.00 0.00 0.00 5.19
918 933 3.157949 GCGGGGAGAAGGAGAGGG 61.158 72.222 0.00 0.00 0.00 4.30
919 934 3.157949 GGCGGGGAGAAGGAGAGG 61.158 72.222 0.00 0.00 0.00 3.69
920 935 3.157949 GGGCGGGGAGAAGGAGAG 61.158 72.222 0.00 0.00 0.00 3.20
921 936 4.798682 GGGGCGGGGAGAAGGAGA 62.799 72.222 0.00 0.00 0.00 3.71
929 944 0.838987 GATATTGTAGGGGGCGGGGA 60.839 60.000 0.00 0.00 0.00 4.81
939 956 3.118956 GGCGGATGAGAGGGATATTGTAG 60.119 52.174 0.00 0.00 0.00 2.74
940 957 2.832129 GGCGGATGAGAGGGATATTGTA 59.168 50.000 0.00 0.00 0.00 2.41
941 958 1.625818 GGCGGATGAGAGGGATATTGT 59.374 52.381 0.00 0.00 0.00 2.71
942 959 1.905215 AGGCGGATGAGAGGGATATTG 59.095 52.381 0.00 0.00 0.00 1.90
944 961 2.183679 GAAGGCGGATGAGAGGGATAT 58.816 52.381 0.00 0.00 0.00 1.63
945 962 1.633774 GAAGGCGGATGAGAGGGATA 58.366 55.000 0.00 0.00 0.00 2.59
946 963 1.124477 GGAAGGCGGATGAGAGGGAT 61.124 60.000 0.00 0.00 0.00 3.85
947 964 1.762460 GGAAGGCGGATGAGAGGGA 60.762 63.158 0.00 0.00 0.00 4.20
961 978 1.619654 TTGCTGTGTGGGAATGGAAG 58.380 50.000 0.00 0.00 0.00 3.46
983 1000 2.126031 GGAGTGGAGAACGCGGTC 60.126 66.667 18.46 18.46 33.90 4.79
1002 1027 1.810151 CGATCGGAGAGAGGGAGAATC 59.190 57.143 7.38 0.00 43.63 2.52
1023 1048 0.610174 GCCATATGAGCGGAGATGGA 59.390 55.000 13.92 0.00 41.23 3.41
1319 1359 1.975327 CTTCTGGAGCGGGAACTGA 59.025 57.895 0.00 0.00 36.31 3.41
1435 1475 1.763968 CTCGTGTCCACCAGATAGGA 58.236 55.000 0.00 0.00 41.22 2.94
1437 1477 1.107114 AGCTCGTGTCCACCAGATAG 58.893 55.000 0.00 0.00 0.00 2.08
1438 1478 0.817654 CAGCTCGTGTCCACCAGATA 59.182 55.000 0.00 0.00 0.00 1.98
1439 1479 1.188219 ACAGCTCGTGTCCACCAGAT 61.188 55.000 0.00 0.00 31.90 2.90
1440 1480 0.538746 TACAGCTCGTGTCCACCAGA 60.539 55.000 0.00 0.00 40.94 3.86
1443 1483 0.246635 ACATACAGCTCGTGTCCACC 59.753 55.000 0.00 0.00 40.94 4.61
1480 1520 0.671163 GCACCACCCAACGACGATTA 60.671 55.000 0.00 0.00 0.00 1.75
1582 1626 2.125512 GCGCTCATTCCAGACCGT 60.126 61.111 0.00 0.00 0.00 4.83
1624 1668 0.889994 TTACAGTACATCACGCCGGT 59.110 50.000 1.90 0.00 0.00 5.28
1625 1669 2.218953 ATTACAGTACATCACGCCGG 57.781 50.000 0.00 0.00 0.00 6.13
1626 1670 4.106909 TGTAATTACAGTACATCACGCCG 58.893 43.478 14.35 0.00 0.00 6.46
1627 1671 5.579511 ACTTGTAATTACAGTACATCACGCC 59.420 40.000 17.36 0.00 37.52 5.68
1638 1682 9.099454 GACTTGGGATTCTACTTGTAATTACAG 57.901 37.037 17.36 13.87 37.52 2.74
1639 1683 8.598916 TGACTTGGGATTCTACTTGTAATTACA 58.401 33.333 14.35 14.35 0.00 2.41
1640 1684 9.444600 TTGACTTGGGATTCTACTTGTAATTAC 57.555 33.333 8.75 8.75 0.00 1.89
1642 1686 8.934023 TTTGACTTGGGATTCTACTTGTAATT 57.066 30.769 0.00 0.00 0.00 1.40
1665 1709 6.480320 CCGTACAGTATACGTAGGTACTCTTT 59.520 42.308 18.85 7.14 39.09 2.52
1683 1727 1.471119 TGAACTAGGAGGCCGTACAG 58.529 55.000 0.00 0.00 0.00 2.74
1690 1734 1.273886 GGGATCGATGAACTAGGAGGC 59.726 57.143 0.54 0.00 0.00 4.70
1701 1745 0.471617 AGAGGCAAAGGGGATCGATG 59.528 55.000 0.54 0.00 0.00 3.84
1940 2027 2.232756 TCAGCTGCTAACAAACACGA 57.767 45.000 9.47 0.00 0.00 4.35
1942 2029 3.983344 CCAATTCAGCTGCTAACAAACAC 59.017 43.478 9.47 0.00 0.00 3.32
1972 2334 4.436451 CGAGGTAACAAAAATAAGACGGCC 60.436 45.833 0.00 0.00 41.41 6.13
1974 2336 5.406175 TGTCGAGGTAACAAAAATAAGACGG 59.594 40.000 0.00 0.00 41.41 4.79
2077 2439 6.570571 GCTCCTTATTGATCTGCATACTCGTA 60.571 42.308 0.00 0.00 0.00 3.43
2078 2440 5.777802 CTCCTTATTGATCTGCATACTCGT 58.222 41.667 0.00 0.00 0.00 4.18
2079 2441 4.624882 GCTCCTTATTGATCTGCATACTCG 59.375 45.833 0.00 0.00 0.00 4.18
2080 2442 5.545588 TGCTCCTTATTGATCTGCATACTC 58.454 41.667 0.00 0.00 0.00 2.59
2081 2443 5.557576 TGCTCCTTATTGATCTGCATACT 57.442 39.130 0.00 0.00 0.00 2.12
2082 2444 6.128063 GGAATGCTCCTTATTGATCTGCATAC 60.128 42.308 0.00 0.00 38.49 2.39
2083 2445 5.942236 GGAATGCTCCTTATTGATCTGCATA 59.058 40.000 0.00 0.00 38.49 3.14
2084 2446 4.765856 GGAATGCTCCTTATTGATCTGCAT 59.234 41.667 0.00 0.00 40.72 3.96
2085 2447 4.139786 GGAATGCTCCTTATTGATCTGCA 58.860 43.478 0.00 0.00 38.88 4.41
2086 2448 3.188048 CGGAATGCTCCTTATTGATCTGC 59.812 47.826 0.00 0.00 39.93 4.26
2087 2449 4.212847 CACGGAATGCTCCTTATTGATCTG 59.787 45.833 0.00 0.00 39.93 2.90
2088 2450 4.384056 CACGGAATGCTCCTTATTGATCT 58.616 43.478 0.00 0.00 39.93 2.75
2160 2523 2.656002 TGGTTGTGGTCGGATTTGAAA 58.344 42.857 0.00 0.00 0.00 2.69
2172 2564 6.369799 CAAACTTGTTTCTTTTTGGTTGTGG 58.630 36.000 0.00 0.00 0.00 4.17
2187 2579 7.408910 GCAAGTGAAAATTATGCAAACTTGTT 58.591 30.769 12.61 0.00 43.02 2.83
2209 2601 3.609853 AGTATTTTCTGCGATCAGGCAA 58.390 40.909 0.00 0.00 43.39 4.52
2236 2629 2.706339 TTTTGTTTGCATGGGCTGTT 57.294 40.000 0.00 0.00 41.91 3.16
2262 2655 3.707102 GTGGTCTAGTAGGGCAGAAATCT 59.293 47.826 0.00 0.00 0.00 2.40
2340 2733 1.379044 GGATCAACTGCAGTGGGGG 60.379 63.158 22.49 10.78 0.00 5.40
2601 3002 5.308825 AGAAAATCTTTGCGAAGAAGGAGA 58.691 37.500 20.22 0.00 44.61 3.71
2677 3078 4.017126 GGTTTCGGAGAAAGAAATGGGAT 58.983 43.478 0.00 0.00 45.90 3.85
2720 3121 0.182775 ACCGACCCAACAAAAGAGCT 59.817 50.000 0.00 0.00 0.00 4.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.