Multiple sequence alignment - TraesCS5D01G269900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G269900 chr5D 100.000 3250 0 0 1990 5239 373770023 373773272 0.000000e+00 6002.0
1 TraesCS5D01G269900 chr5D 100.000 1210 0 0 424 1633 373768457 373769666 0.000000e+00 2235.0
2 TraesCS5D01G269900 chr5D 100.000 278 0 0 1 278 373768034 373768311 1.010000e-141 514.0
3 TraesCS5D01G269900 chr5A 91.133 1094 71 15 2629 3701 475616882 475617970 0.000000e+00 1459.0
4 TraesCS5D01G269900 chr5A 92.419 554 23 5 565 1103 475616085 475616634 0.000000e+00 773.0
5 TraesCS5D01G269900 chr5A 88.698 407 40 4 4120 4522 475618284 475618688 4.710000e-135 492.0
6 TraesCS5D01G269900 chr5A 84.848 429 31 18 4569 4996 475618685 475619080 8.170000e-108 401.0
7 TraesCS5D01G269900 chr5A 90.221 317 15 2 3791 4092 475617969 475618284 2.940000e-107 399.0
8 TraesCS5D01G269900 chr5A 91.064 235 11 5 2403 2631 475616624 475616854 5.100000e-80 309.0
9 TraesCS5D01G269900 chr5A 90.336 238 16 6 1 234 475615810 475616044 6.590000e-79 305.0
10 TraesCS5D01G269900 chr5A 93.220 118 6 2 5066 5181 299272894 299273011 6.980000e-39 172.0
11 TraesCS5D01G269900 chr5A 78.974 195 40 1 1 195 556535030 556534837 1.180000e-26 132.0
12 TraesCS5D01G269900 chr5A 83.562 146 14 4 966 1103 400400696 400400553 1.530000e-25 128.0
13 TraesCS5D01G269900 chr5A 95.312 64 3 0 4994 5057 475619139 475619202 9.280000e-18 102.0
14 TraesCS5D01G269900 chr5A 93.103 58 3 1 5180 5237 475619373 475619429 3.360000e-12 84.2
15 TraesCS5D01G269900 chr2B 86.698 1060 114 9 3015 4056 772026412 772027462 0.000000e+00 1151.0
16 TraesCS5D01G269900 chr2B 97.073 205 6 0 2198 2402 374244772 374244568 3.880000e-91 346.0
17 TraesCS5D01G269900 chr2B 91.045 134 7 3 973 1103 772023758 772023889 5.390000e-40 176.0
18 TraesCS5D01G269900 chr2D 85.835 1066 129 9 3015 4064 629208716 629207657 0.000000e+00 1112.0
19 TraesCS5D01G269900 chr2D 96.272 456 17 0 1100 1555 519891029 519890574 0.000000e+00 749.0
20 TraesCS5D01G269900 chr2D 98.206 223 4 0 1995 2217 519890345 519890123 1.770000e-104 390.0
21 TraesCS5D01G269900 chr2D 82.581 155 21 5 2916 3068 629210453 629210303 1.180000e-26 132.0
22 TraesCS5D01G269900 chr2A 85.532 1099 120 18 2990 4064 758929200 758928117 0.000000e+00 1112.0
23 TraesCS5D01G269900 chr2A 95.417 240 11 0 1099 1338 378848271 378848032 2.960000e-102 383.0
24 TraesCS5D01G269900 chr2A 96.682 211 6 1 2198 2407 378848065 378848275 3.000000e-92 350.0
25 TraesCS5D01G269900 chr2A 96.226 212 7 1 2198 2408 378847382 378847171 3.880000e-91 346.0
26 TraesCS5D01G269900 chr2A 94.690 113 4 2 5068 5178 180979150 180979262 1.940000e-39 174.0
27 TraesCS5D01G269900 chr2A 89.565 115 8 2 992 1103 42740836 42740723 5.470000e-30 143.0
28 TraesCS5D01G269900 chr2A 77.419 248 47 7 1 244 612302944 612303186 7.070000e-29 139.0
29 TraesCS5D01G269900 chr2A 85.926 135 10 3 977 1103 59042543 59042676 9.150000e-28 135.0
30 TraesCS5D01G269900 chr2A 76.744 215 38 10 46 255 266870657 266870450 5.550000e-20 110.0
31 TraesCS5D01G269900 chr7A 96.218 238 8 1 1101 1338 237508335 237508099 6.360000e-104 388.0
32 TraesCS5D01G269900 chr7A 95.833 240 9 1 1099 1338 668996743 668996981 2.290000e-103 387.0
33 TraesCS5D01G269900 chr7A 95.455 242 9 2 1098 1338 237507360 237507600 8.230000e-103 385.0
34 TraesCS5D01G269900 chr7A 95.536 112 4 1 5068 5178 697132993 697132882 1.500000e-40 178.0
35 TraesCS5D01G269900 chr7A 89.231 130 12 2 5050 5178 267276031 267276159 1.510000e-35 161.0
36 TraesCS5D01G269900 chr7A 90.435 115 7 2 992 1103 4725089 4724976 1.180000e-31 148.0
37 TraesCS5D01G269900 chr7A 83.562 146 14 4 966 1103 113108661 113108804 1.530000e-25 128.0
38 TraesCS5D01G269900 chr4B 95.816 239 9 1 1100 1338 612329090 612329327 8.230000e-103 385.0
39 TraesCS5D01G269900 chr4B 96.585 205 7 0 2198 2402 612329295 612329091 1.810000e-89 340.0
40 TraesCS5D01G269900 chr4B 92.593 54 2 2 2029 2081 579733600 579733652 5.630000e-10 76.8
41 TraesCS5D01G269900 chr4B 94.000 50 1 2 2033 2081 552846199 552846247 2.020000e-09 75.0
42 TraesCS5D01G269900 chr6D 94.048 252 14 1 1100 1351 17448239 17447989 1.060000e-101 381.0
43 TraesCS5D01G269900 chr6D 97.073 205 6 0 2198 2402 17448034 17448238 3.880000e-91 346.0
44 TraesCS5D01G269900 chr6D 94.196 224 8 4 2198 2418 79713587 79713808 2.340000e-88 337.0
45 TraesCS5D01G269900 chr6D 81.122 196 35 2 1 195 152249137 152249331 7.020000e-34 156.0
46 TraesCS5D01G269900 chr6D 96.970 33 1 0 1345 1377 34734833 34734865 7.330000e-04 56.5
47 TraesCS5D01G269900 chr6D 96.970 33 1 0 1345 1377 34928749 34928717 7.330000e-04 56.5
48 TraesCS5D01G269900 chr6B 94.715 246 12 1 1100 1345 713457235 713457479 1.060000e-101 381.0
49 TraesCS5D01G269900 chr7D 93.625 251 16 0 1101 1351 569232266 569232516 4.950000e-100 375.0
50 TraesCS5D01G269900 chr7D 96.190 210 7 1 2198 2407 65757615 65757823 5.020000e-90 342.0
51 TraesCS5D01G269900 chr7D 96.618 207 5 2 2198 2403 569232470 569232265 5.020000e-90 342.0
52 TraesCS5D01G269900 chr7D 89.209 139 11 4 5046 5182 474604688 474604824 2.510000e-38 171.0
53 TraesCS5D01G269900 chrUn 97.561 205 5 0 2198 2402 306830515 306830719 8.350000e-93 351.0
54 TraesCS5D01G269900 chr3D 100.000 148 0 0 1999 2146 16272379 16272232 1.860000e-69 274.0
55 TraesCS5D01G269900 chr3D 79.605 304 37 7 3777 4055 500473295 500473598 1.490000e-45 195.0
56 TraesCS5D01G269900 chr3D 90.541 148 0 1 1500 1633 16272540 16272393 3.220000e-42 183.0
57 TraesCS5D01G269900 chr3A 99.329 149 1 0 1998 2146 20145260 20145408 2.400000e-68 270.0
58 TraesCS5D01G269900 chr3A 89.865 148 1 1 1500 1633 20145100 20145247 1.500000e-40 178.0
59 TraesCS5D01G269900 chr3A 93.966 116 6 1 5072 5186 614468425 614468540 1.940000e-39 174.0
60 TraesCS5D01G269900 chr3A 78.088 251 49 5 4 251 429658564 429658811 2.530000e-33 154.0
61 TraesCS5D01G269900 chr3A 100.000 28 0 0 1478 1505 20145011 20145038 9.000000e-03 52.8
62 TraesCS5D01G269900 chr3B 98.658 149 2 0 1998 2146 23765461 23765313 1.120000e-66 265.0
63 TraesCS5D01G269900 chr3B 88.514 148 3 2 1500 1633 23765621 23765474 3.250000e-37 167.0
64 TraesCS5D01G269900 chr3B 89.655 87 9 0 53 139 592664091 592664005 1.540000e-20 111.0
65 TraesCS5D01G269900 chr3B 92.105 38 1 2 1478 1514 23765710 23765674 9.000000e-03 52.8
66 TraesCS5D01G269900 chr4A 97.987 149 3 0 1998 2146 643996622 643996474 5.200000e-65 259.0
67 TraesCS5D01G269900 chr4A 85.235 149 7 2 1496 1629 643996787 643996639 7.070000e-29 139.0
68 TraesCS5D01G269900 chr4A 83.448 145 14 5 966 1103 707654336 707654477 5.510000e-25 126.0
69 TraesCS5D01G269900 chr1A 92.683 123 7 2 5069 5190 148610329 148610450 5.390000e-40 176.0
70 TraesCS5D01G269900 chr1A 94.737 114 5 1 5072 5184 384334555 384334442 5.390000e-40 176.0
71 TraesCS5D01G269900 chr6A 88.489 139 14 2 5061 5197 479885368 479885230 3.250000e-37 167.0
72 TraesCS5D01G269900 chr6A 96.970 33 1 0 1345 1377 39047770 39047802 7.330000e-04 56.5
73 TraesCS5D01G269900 chr6A 96.970 33 1 0 1345 1377 39131695 39131663 7.330000e-04 56.5
74 TraesCS5D01G269900 chr5B 89.565 115 8 2 992 1103 631327119 631327006 5.470000e-30 143.0
75 TraesCS5D01G269900 chr7B 79.330 179 34 3 18 195 582711136 582710960 7.120000e-24 122.0
76 TraesCS5D01G269900 chr7B 87.234 47 5 1 150 195 389090755 389090709 9.000000e-03 52.8
77 TraesCS5D01G269900 chr1D 94.444 54 2 1 1345 1398 308198032 308198084 1.210000e-11 82.4
78 TraesCS5D01G269900 chr1D 80.460 87 14 3 113 197 47648053 47648138 4.380000e-06 63.9
79 TraesCS5D01G269900 chr4D 91.379 58 2 3 2025 2081 464156710 464156765 5.630000e-10 76.8
80 TraesCS5D01G269900 chr4D 94.000 50 1 2 2033 2081 443521053 443521101 2.020000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G269900 chr5D 373768034 373773272 5238 False 2917.000000 6002 100.000000 1 5239 3 chr5D.!!$F1 5238
1 TraesCS5D01G269900 chr5A 475615810 475619429 3619 False 480.466667 1459 90.792667 1 5237 9 chr5A.!!$F2 5236
2 TraesCS5D01G269900 chr2B 772023758 772027462 3704 False 663.500000 1151 88.871500 973 4056 2 chr2B.!!$F1 3083
3 TraesCS5D01G269900 chr2D 629207657 629210453 2796 True 622.000000 1112 84.208000 2916 4064 2 chr2D.!!$R2 1148
4 TraesCS5D01G269900 chr2D 519890123 519891029 906 True 569.500000 749 97.239000 1100 2217 2 chr2D.!!$R1 1117
5 TraesCS5D01G269900 chr2A 758928117 758929200 1083 True 1112.000000 1112 85.532000 2990 4064 1 chr2A.!!$R3 1074
6 TraesCS5D01G269900 chr2A 378847171 378848271 1100 True 364.500000 383 95.821500 1099 2408 2 chr2A.!!$R4 1309

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
537 540 0.036577 CTGGAGCTGGAGAAGGTGTG 60.037 60.0 0.0 0.0 36.52 3.82 F
857 875 0.164647 CGTTGCTGCGAAGGAAGAAG 59.835 55.0 0.0 0.0 0.00 2.85 F
2486 2995 0.671472 CCTGTTACCCGAACCCGAAC 60.671 60.0 0.0 0.0 37.22 3.95 F
3739 6297 0.307760 GGCTGTTGTTTCACCAGTCG 59.692 55.0 0.0 0.0 0.00 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2286 2777 1.950909 CCGTGGCAGAAAACTACCAAA 59.049 47.619 0.00 0.0 33.03 3.28 R
2577 3833 0.109226 AGCTACCGCTCGAGAAACAC 60.109 55.000 18.75 0.0 45.15 3.32 R
3778 6336 0.316204 GCTCTGCCACAACTGCAATT 59.684 50.000 0.00 0.0 38.46 2.32 R
4819 7399 0.174845 CTTGGTCTGCAATGCCCATG 59.825 55.000 1.53 1.7 0.00 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 7.509141 TTTGCTTGAGATGTAGAAATGTCAA 57.491 32.000 0.00 0.00 37.46 3.18
54 55 7.509141 TTGCTTGAGATGTAGAAATGTCAAA 57.491 32.000 0.00 0.00 38.80 2.69
78 79 9.661563 AAATTTGACATCAATGTGATAATGCTT 57.338 25.926 0.00 0.00 41.95 3.91
79 80 8.867112 ATTTGACATCAATGTGATAATGCTTC 57.133 30.769 0.00 0.00 41.95 3.86
138 141 8.480643 TGGTGTCGAATTTGTTATTTTTGTTT 57.519 26.923 0.00 0.00 0.00 2.83
147 150 9.606631 AATTTGTTATTTTTGTTTCCTGTGCTA 57.393 25.926 0.00 0.00 0.00 3.49
258 261 7.690952 AAATTTAAAATGTGCTACGGGAGTA 57.309 32.000 0.00 0.00 46.17 2.59
259 262 7.875327 AATTTAAAATGTGCTACGGGAGTAT 57.125 32.000 0.00 0.00 45.62 2.12
260 263 6.671614 TTTAAAATGTGCTACGGGAGTATG 57.328 37.500 0.00 0.00 45.62 2.39
261 264 4.481368 AAAATGTGCTACGGGAGTATGA 57.519 40.909 0.00 0.00 45.62 2.15
262 265 4.689612 AAATGTGCTACGGGAGTATGAT 57.310 40.909 0.00 0.00 45.62 2.45
263 266 3.667497 ATGTGCTACGGGAGTATGATG 57.333 47.619 0.00 0.00 45.62 3.07
264 267 2.661718 TGTGCTACGGGAGTATGATGA 58.338 47.619 0.00 0.00 45.62 2.92
265 268 2.623416 TGTGCTACGGGAGTATGATGAG 59.377 50.000 0.00 0.00 45.62 2.90
266 269 2.623889 GTGCTACGGGAGTATGATGAGT 59.376 50.000 0.00 0.00 45.62 3.41
269 272 4.161565 TGCTACGGGAGTATGATGAGTTTT 59.838 41.667 0.00 0.00 45.62 2.43
270 273 5.116882 GCTACGGGAGTATGATGAGTTTTT 58.883 41.667 0.00 0.00 45.62 1.94
456 459 5.528600 TTTTGAAAGGGGGAGTATGATGA 57.471 39.130 0.00 0.00 0.00 2.92
457 460 4.778213 TTGAAAGGGGGAGTATGATGAG 57.222 45.455 0.00 0.00 0.00 2.90
458 461 3.736094 TGAAAGGGGGAGTATGATGAGT 58.264 45.455 0.00 0.00 0.00 3.41
459 462 4.111577 TGAAAGGGGGAGTATGATGAGTT 58.888 43.478 0.00 0.00 0.00 3.01
461 464 5.015178 TGAAAGGGGGAGTATGATGAGTTTT 59.985 40.000 0.00 0.00 0.00 2.43
493 496 2.196742 TAGGGGGAGCATGATGAGTT 57.803 50.000 0.00 0.00 0.00 3.01
511 514 5.280945 TGAGTTGATAAAACTGCAAAGTGC 58.719 37.500 0.00 0.00 45.29 4.40
524 527 1.796459 CAAAGTGCATTTTGCTGGAGC 59.204 47.619 19.93 0.00 45.31 4.70
525 528 1.335145 AAGTGCATTTTGCTGGAGCT 58.665 45.000 0.00 0.00 45.31 4.09
526 529 0.601558 AGTGCATTTTGCTGGAGCTG 59.398 50.000 0.00 0.00 45.31 4.24
527 530 0.389426 GTGCATTTTGCTGGAGCTGG 60.389 55.000 0.00 0.00 45.31 4.85
529 532 0.172803 GCATTTTGCTGGAGCTGGAG 59.827 55.000 0.00 0.00 40.96 3.86
531 534 2.165167 CATTTTGCTGGAGCTGGAGAA 58.835 47.619 0.00 0.00 42.66 2.87
533 536 0.037303 TTTGCTGGAGCTGGAGAAGG 59.963 55.000 0.00 0.00 42.66 3.46
536 539 1.835927 GCTGGAGCTGGAGAAGGTGT 61.836 60.000 0.00 0.00 36.52 4.16
537 540 0.036577 CTGGAGCTGGAGAAGGTGTG 60.037 60.000 0.00 0.00 36.52 3.82
538 541 0.764369 TGGAGCTGGAGAAGGTGTGT 60.764 55.000 0.00 0.00 36.52 3.72
539 542 1.267121 GGAGCTGGAGAAGGTGTGTA 58.733 55.000 0.00 0.00 36.52 2.90
540 543 1.834263 GGAGCTGGAGAAGGTGTGTAT 59.166 52.381 0.00 0.00 36.52 2.29
541 544 2.237392 GGAGCTGGAGAAGGTGTGTATT 59.763 50.000 0.00 0.00 36.52 1.89
542 545 3.526534 GAGCTGGAGAAGGTGTGTATTC 58.473 50.000 0.00 0.00 36.52 1.75
543 546 2.906389 AGCTGGAGAAGGTGTGTATTCA 59.094 45.455 0.00 0.00 34.56 2.57
544 547 3.521126 AGCTGGAGAAGGTGTGTATTCAT 59.479 43.478 0.00 0.00 34.56 2.57
545 548 4.018960 AGCTGGAGAAGGTGTGTATTCATT 60.019 41.667 0.00 0.00 34.56 2.57
546 549 4.333926 GCTGGAGAAGGTGTGTATTCATTC 59.666 45.833 0.00 0.00 0.00 2.67
547 550 4.503910 TGGAGAAGGTGTGTATTCATTCG 58.496 43.478 0.00 0.00 0.00 3.34
549 552 4.935808 GGAGAAGGTGTGTATTCATTCGTT 59.064 41.667 0.00 0.00 0.00 3.85
550 553 5.411669 GGAGAAGGTGTGTATTCATTCGTTT 59.588 40.000 0.00 0.00 0.00 3.60
551 554 6.402226 GGAGAAGGTGTGTATTCATTCGTTTC 60.402 42.308 0.00 0.00 0.00 2.78
552 555 4.921470 AGGTGTGTATTCATTCGTTTCG 57.079 40.909 0.00 0.00 0.00 3.46
553 556 3.124636 AGGTGTGTATTCATTCGTTTCGC 59.875 43.478 0.00 0.00 0.00 4.70
554 557 3.081445 GTGTGTATTCATTCGTTTCGCG 58.919 45.455 0.00 0.00 43.01 5.87
558 561 1.722011 ATTCATTCGTTTCGCGGAGT 58.278 45.000 6.13 0.00 41.72 3.85
559 562 1.504359 TTCATTCGTTTCGCGGAGTT 58.496 45.000 6.13 0.00 41.72 3.01
560 563 0.787787 TCATTCGTTTCGCGGAGTTG 59.212 50.000 6.13 0.00 41.72 3.16
562 565 0.788391 ATTCGTTTCGCGGAGTTGAC 59.212 50.000 6.13 0.00 41.72 3.18
575 578 3.435671 CGGAGTTGACAGAAATTACACCC 59.564 47.826 0.00 0.00 0.00 4.61
608 611 4.442733 GCGAAATGAAAAATGAACGGTTCA 59.557 37.500 24.32 24.32 45.01 3.18
685 688 3.625897 CCTCCACGGCTCCACACA 61.626 66.667 0.00 0.00 0.00 3.72
744 762 0.454600 TCTCATCGCTTACCCGTGAC 59.545 55.000 0.00 0.00 0.00 3.67
845 863 2.805353 CTCGGTCCGTCGTTGCTG 60.805 66.667 11.88 0.00 0.00 4.41
857 875 0.164647 CGTTGCTGCGAAGGAAGAAG 59.835 55.000 0.00 0.00 0.00 2.85
954 972 1.035385 CCAGGGGCGTTAACCAATCC 61.035 60.000 0.00 0.00 0.00 3.01
958 976 1.747745 GGCGTTAACCAATCCGGCT 60.748 57.895 0.00 0.00 41.90 5.52
1160 1184 4.508861 GCGACAGAAAACTACCACTTTACA 59.491 41.667 0.00 0.00 0.00 2.41
1237 1261 2.397549 GTGAAAATTGCTCGCTTTGCT 58.602 42.857 0.00 0.00 0.00 3.91
1555 2046 1.675641 AAGAGCACCAACATCGGGC 60.676 57.895 0.00 0.00 0.00 6.13
1556 2047 3.499737 GAGCACCAACATCGGGCG 61.500 66.667 0.00 0.00 0.00 6.13
1557 2048 3.950794 GAGCACCAACATCGGGCGA 62.951 63.158 0.00 0.00 0.00 5.54
1558 2049 3.499737 GCACCAACATCGGGCGAG 61.500 66.667 0.00 0.00 0.00 5.03
1559 2050 2.819595 CACCAACATCGGGCGAGG 60.820 66.667 0.00 0.00 0.00 4.63
1560 2051 4.778143 ACCAACATCGGGCGAGGC 62.778 66.667 0.00 0.00 0.00 4.70
2286 2777 2.859806 GCAAAGCGAGCAGTTTTCACAT 60.860 45.455 0.00 0.00 30.63 3.21
2298 2789 6.756542 AGCAGTTTTCACATTTGGTAGTTTTC 59.243 34.615 0.00 0.00 0.00 2.29
2364 2855 5.750067 TCGTAAAGTGGTAGTTTTCTGTCAC 59.250 40.000 0.00 0.00 35.78 3.67
2402 2893 8.168790 TGTGGTAGTTTTTGGTTAAATACTCC 57.831 34.615 0.00 0.00 38.47 3.85
2403 2894 7.041235 TGTGGTAGTTTTTGGTTAAATACTCCG 60.041 37.037 0.00 0.00 38.47 4.63
2404 2895 6.072563 TGGTAGTTTTTGGTTAAATACTCCGC 60.073 38.462 0.00 0.00 38.47 5.54
2405 2896 5.381174 AGTTTTTGGTTAAATACTCCGCC 57.619 39.130 0.00 0.00 34.37 6.13
2483 2992 2.266689 CCCTGTTACCCGAACCCG 59.733 66.667 0.00 0.00 37.22 5.28
2486 2995 0.671472 CCTGTTACCCGAACCCGAAC 60.671 60.000 0.00 0.00 37.22 3.95
2523 3036 2.484889 GCGTATGCCTAAGCTAAGCTT 58.515 47.619 3.48 3.48 43.09 3.74
2549 3063 4.307032 AGGACCTCTGCATGTTTACATT 57.693 40.909 0.00 0.00 33.61 2.71
2554 3068 8.220559 AGGACCTCTGCATGTTTACATTATTAT 58.779 33.333 0.00 0.00 33.61 1.28
2588 3844 4.878971 TCTGAGAGGATAGTGTTTCTCGAG 59.121 45.833 5.93 5.93 39.08 4.04
2614 3870 4.954092 AGCTTGGAATCAAATTCGAGAC 57.046 40.909 0.00 0.00 40.17 3.36
2620 3876 0.810031 ATCAAATTCGAGACCGCCCG 60.810 55.000 0.00 0.00 35.37 6.13
2634 4449 1.522569 GCCCGGTGCTCATTAGACT 59.477 57.895 0.00 0.00 36.87 3.24
2637 4452 2.419574 GCCCGGTGCTCATTAGACTTTA 60.420 50.000 0.00 0.00 36.87 1.85
2638 4453 3.458189 CCCGGTGCTCATTAGACTTTAG 58.542 50.000 0.00 0.00 0.00 1.85
2649 4464 5.637810 TCATTAGACTTTAGTGCGTTCAAGG 59.362 40.000 0.00 0.00 0.00 3.61
2661 4476 4.034048 GTGCGTTCAAGGGTATTCTACATG 59.966 45.833 0.00 0.00 0.00 3.21
2674 4491 8.893727 GGGTATTCTACATGTATGATAATTGCC 58.106 37.037 5.91 9.36 0.00 4.52
2678 4495 7.744087 TCTACATGTATGATAATTGCCAACC 57.256 36.000 5.91 0.00 0.00 3.77
2723 4540 8.073768 ACATGTAAAGAATACACAAAGGAAACG 58.926 33.333 0.00 0.00 0.00 3.60
2733 4550 3.064820 CACAAAGGAAACGCACACTAACT 59.935 43.478 0.00 0.00 0.00 2.24
2744 4561 3.498397 CGCACACTAACTGGTTGAGAAAT 59.502 43.478 0.00 0.00 0.00 2.17
2751 4568 9.403583 ACACTAACTGGTTGAGAAATTAAAAGA 57.596 29.630 0.00 0.00 0.00 2.52
2780 4597 8.731605 GGTGTCTATATTCTCACTTCGATCATA 58.268 37.037 0.00 0.00 0.00 2.15
2839 4656 4.790718 TCAGGCTACCACTCATAGAGTA 57.209 45.455 0.00 0.00 41.37 2.59
2867 4684 4.682787 TGAATGAGCTATTACAGACACCG 58.317 43.478 0.00 0.00 0.00 4.94
2876 4717 1.860676 TACAGACACCGTGTTTCAGC 58.139 50.000 5.45 0.00 0.00 4.26
2894 4735 5.751243 TCAGCCAAGTCTTTCTTAACAAC 57.249 39.130 0.00 0.00 34.66 3.32
2899 4740 5.736207 GCCAAGTCTTTCTTAACAACCCAAG 60.736 44.000 0.00 0.00 34.66 3.61
2901 4742 6.127451 CCAAGTCTTTCTTAACAACCCAAGTT 60.127 38.462 0.00 0.00 33.75 2.66
2903 4744 7.476540 AGTCTTTCTTAACAACCCAAGTTTT 57.523 32.000 0.00 0.00 32.45 2.43
2907 4748 5.986501 TCTTAACAACCCAAGTTTTGTGT 57.013 34.783 0.00 0.00 36.08 3.72
2908 4749 7.463961 TTCTTAACAACCCAAGTTTTGTGTA 57.536 32.000 0.00 0.00 36.08 2.90
2909 4750 7.648039 TCTTAACAACCCAAGTTTTGTGTAT 57.352 32.000 0.00 0.00 36.08 2.29
2910 4751 8.068892 TCTTAACAACCCAAGTTTTGTGTATT 57.931 30.769 0.00 0.00 36.08 1.89
2911 4752 8.532819 TCTTAACAACCCAAGTTTTGTGTATTT 58.467 29.630 0.00 0.00 36.08 1.40
2934 4775 7.496346 TTCATTTCACTAATCTGGGAGTAGT 57.504 36.000 2.44 2.44 42.88 2.73
2935 4776 8.603898 TTCATTTCACTAATCTGGGAGTAGTA 57.396 34.615 7.23 0.00 40.69 1.82
2936 4777 8.239038 TCATTTCACTAATCTGGGAGTAGTAG 57.761 38.462 7.23 3.89 40.69 2.57
2961 4802 7.591426 AGACATTTCATTGTTTTAGCTTTCGAC 59.409 33.333 0.00 0.00 0.00 4.20
2979 4820 4.507710 TCGACGACTCTTACTTAGGCTTA 58.492 43.478 0.00 0.00 0.00 3.09
2985 4826 8.252964 ACGACTCTTACTTAGGCTTAAATTTG 57.747 34.615 0.00 0.00 0.00 2.32
3003 4844 3.921119 TTGAACATGTCACATCCTTGC 57.079 42.857 0.00 0.00 35.39 4.01
3187 5654 2.624838 CTGAAAGCTGGTGGAATTGTGT 59.375 45.455 0.00 0.00 0.00 3.72
3231 5698 6.227298 TCCTCTGATCAGAAGGTAATTCAC 57.773 41.667 25.09 0.00 40.67 3.18
3314 5781 8.761575 TTTTAATTTTCTCTGCATTAGCCAAG 57.238 30.769 0.00 0.00 41.13 3.61
3353 5820 1.094785 CTACTCATGGGCGGTTTTGG 58.905 55.000 0.00 0.00 0.00 3.28
3361 5828 1.362355 GGCGGTTTTGGTGAAGTGG 59.638 57.895 0.00 0.00 0.00 4.00
3372 5839 0.880278 GTGAAGTGGACGCTTCTGCA 60.880 55.000 21.84 4.70 43.74 4.41
3391 5858 2.703416 CAACAAGCTCACAGGATAGCA 58.297 47.619 0.00 0.00 41.32 3.49
3417 5884 5.359716 AGTCTGTTACTGTGAGTAAGACG 57.640 43.478 8.77 0.00 40.70 4.18
3524 5992 6.239458 CCATCTTGGAGTATAGGTTCTTCCTC 60.239 46.154 0.00 0.00 42.64 3.71
3575 6043 4.332543 TCCAAAGATTGAAATCGATGACGG 59.667 41.667 0.00 0.00 40.35 4.79
3577 6045 2.905075 AGATTGAAATCGATGACGGCA 58.095 42.857 0.00 0.00 40.35 5.69
3664 6132 4.105577 TGGTATAGCCAACAAACCCTCTA 58.894 43.478 0.00 0.00 45.94 2.43
3674 6142 5.105106 CCAACAAACCCTCTAACCTTGTTTT 60.105 40.000 0.00 0.00 37.95 2.43
3676 6144 6.704289 ACAAACCCTCTAACCTTGTTTTAC 57.296 37.500 0.00 0.00 0.00 2.01
3701 6259 7.721399 ACTCTTGTGAAGATGTTTAATTCAGGT 59.279 33.333 0.00 0.00 36.82 4.00
3702 6260 8.463930 TCTTGTGAAGATGTTTAATTCAGGTT 57.536 30.769 0.00 0.00 33.83 3.50
3703 6261 8.912988 TCTTGTGAAGATGTTTAATTCAGGTTT 58.087 29.630 0.00 0.00 33.83 3.27
3706 6264 9.567776 TGTGAAGATGTTTAATTCAGGTTTAGA 57.432 29.630 0.00 0.00 33.83 2.10
3709 6267 9.508567 GAAGATGTTTAATTCAGGTTTAGATGC 57.491 33.333 0.00 0.00 0.00 3.91
3710 6268 8.814038 AGATGTTTAATTCAGGTTTAGATGCT 57.186 30.769 0.00 0.00 0.00 3.79
3711 6269 9.905713 AGATGTTTAATTCAGGTTTAGATGCTA 57.094 29.630 0.00 0.00 0.00 3.49
3720 6278 9.643693 ATTCAGGTTTAGATGCTAAAATTGTTG 57.356 29.630 1.56 0.00 0.00 3.33
3721 6279 7.601856 TCAGGTTTAGATGCTAAAATTGTTGG 58.398 34.615 1.56 0.00 0.00 3.77
3722 6280 6.311200 CAGGTTTAGATGCTAAAATTGTTGGC 59.689 38.462 1.56 0.00 0.00 4.52
3723 6281 6.211384 AGGTTTAGATGCTAAAATTGTTGGCT 59.789 34.615 1.56 0.00 0.00 4.75
3724 6282 6.311200 GGTTTAGATGCTAAAATTGTTGGCTG 59.689 38.462 1.56 0.00 0.00 4.85
3725 6283 6.588719 TTAGATGCTAAAATTGTTGGCTGT 57.411 33.333 0.00 0.00 0.00 4.40
3726 6284 5.473066 AGATGCTAAAATTGTTGGCTGTT 57.527 34.783 0.00 0.00 0.00 3.16
3727 6285 5.232463 AGATGCTAAAATTGTTGGCTGTTG 58.768 37.500 0.00 0.00 0.00 3.33
3728 6286 4.399004 TGCTAAAATTGTTGGCTGTTGT 57.601 36.364 0.00 0.00 0.00 3.32
3729 6287 4.764172 TGCTAAAATTGTTGGCTGTTGTT 58.236 34.783 0.00 0.00 0.00 2.83
3730 6288 5.181748 TGCTAAAATTGTTGGCTGTTGTTT 58.818 33.333 0.00 0.00 0.00 2.83
3731 6289 5.293079 TGCTAAAATTGTTGGCTGTTGTTTC 59.707 36.000 0.00 0.00 0.00 2.78
3732 6290 5.293079 GCTAAAATTGTTGGCTGTTGTTTCA 59.707 36.000 0.00 0.00 0.00 2.69
3733 6291 5.544136 AAAATTGTTGGCTGTTGTTTCAC 57.456 34.783 0.00 0.00 0.00 3.18
3734 6292 2.663826 TTGTTGGCTGTTGTTTCACC 57.336 45.000 0.00 0.00 0.00 4.02
3735 6293 1.550327 TGTTGGCTGTTGTTTCACCA 58.450 45.000 0.00 0.00 0.00 4.17
3736 6294 1.476085 TGTTGGCTGTTGTTTCACCAG 59.524 47.619 0.00 0.00 0.00 4.00
3737 6295 1.476488 GTTGGCTGTTGTTTCACCAGT 59.524 47.619 0.00 0.00 0.00 4.00
3738 6296 1.388547 TGGCTGTTGTTTCACCAGTC 58.611 50.000 0.00 0.00 0.00 3.51
3739 6297 0.307760 GGCTGTTGTTTCACCAGTCG 59.692 55.000 0.00 0.00 0.00 4.18
3740 6298 0.307760 GCTGTTGTTTCACCAGTCGG 59.692 55.000 0.00 0.00 38.77 4.79
3741 6299 1.948104 CTGTTGTTTCACCAGTCGGA 58.052 50.000 0.00 0.00 35.59 4.55
3742 6300 1.867233 CTGTTGTTTCACCAGTCGGAG 59.133 52.381 0.00 0.00 35.59 4.63
3743 6301 1.483004 TGTTGTTTCACCAGTCGGAGA 59.517 47.619 0.00 0.00 35.59 3.71
3744 6302 2.104111 TGTTGTTTCACCAGTCGGAGAT 59.896 45.455 0.00 0.00 40.67 2.75
3745 6303 3.139077 GTTGTTTCACCAGTCGGAGATT 58.861 45.455 0.00 0.00 40.67 2.40
3746 6304 2.766313 TGTTTCACCAGTCGGAGATTG 58.234 47.619 0.00 0.00 44.22 2.67
3747 6305 2.104111 TGTTTCACCAGTCGGAGATTGT 59.896 45.455 0.00 0.00 43.03 2.71
3748 6306 2.455674 TTCACCAGTCGGAGATTGTG 57.544 50.000 0.00 0.00 43.03 3.33
3749 6307 1.627864 TCACCAGTCGGAGATTGTGA 58.372 50.000 0.00 0.00 43.03 3.58
3750 6308 1.967779 TCACCAGTCGGAGATTGTGAA 59.032 47.619 0.00 0.00 43.03 3.18
3751 6309 2.029020 TCACCAGTCGGAGATTGTGAAG 60.029 50.000 0.00 0.00 43.03 3.02
3752 6310 1.971357 ACCAGTCGGAGATTGTGAAGT 59.029 47.619 0.00 0.00 43.03 3.01
3753 6311 2.289072 ACCAGTCGGAGATTGTGAAGTG 60.289 50.000 0.00 0.00 43.03 3.16
3754 6312 2.341257 CAGTCGGAGATTGTGAAGTGG 58.659 52.381 0.00 0.00 39.52 4.00
3755 6313 1.276421 AGTCGGAGATTGTGAAGTGGG 59.724 52.381 0.00 0.00 40.67 4.61
3756 6314 1.275291 GTCGGAGATTGTGAAGTGGGA 59.725 52.381 0.00 0.00 40.67 4.37
3757 6315 1.550524 TCGGAGATTGTGAAGTGGGAG 59.449 52.381 0.00 0.00 0.00 4.30
3758 6316 1.743996 GGAGATTGTGAAGTGGGAGC 58.256 55.000 0.00 0.00 0.00 4.70
3759 6317 1.680249 GGAGATTGTGAAGTGGGAGCC 60.680 57.143 0.00 0.00 0.00 4.70
3760 6318 1.003580 GAGATTGTGAAGTGGGAGCCA 59.996 52.381 0.00 0.00 0.00 4.75
3777 6335 2.074547 CCACAAAGAAGGCATGCAAG 57.925 50.000 21.36 3.00 0.00 4.01
3778 6336 1.614903 CCACAAAGAAGGCATGCAAGA 59.385 47.619 21.36 0.00 0.00 3.02
3779 6337 2.036217 CCACAAAGAAGGCATGCAAGAA 59.964 45.455 21.36 0.00 0.00 2.52
3780 6338 3.306502 CCACAAAGAAGGCATGCAAGAAT 60.307 43.478 21.36 0.00 0.00 2.40
3781 6339 4.312443 CACAAAGAAGGCATGCAAGAATT 58.688 39.130 21.36 5.74 0.00 2.17
3793 6351 2.512485 CAAGAATTGCAGTTGTGGCA 57.488 45.000 0.00 0.00 40.39 4.92
3794 6352 2.400399 CAAGAATTGCAGTTGTGGCAG 58.600 47.619 0.00 0.00 43.05 4.85
3795 6353 1.985473 AGAATTGCAGTTGTGGCAGA 58.015 45.000 0.00 0.00 43.05 4.26
3867 6425 1.740025 GATAACCCTGTGTCAGCTTGC 59.260 52.381 0.00 0.00 0.00 4.01
3919 6494 3.600388 GTGATTCCCACTAGTCAACTGG 58.400 50.000 0.00 0.00 42.44 4.00
3924 6499 1.205893 CCCACTAGTCAACTGGCTCTC 59.794 57.143 0.00 0.00 0.00 3.20
4074 6649 7.740805 AGGTAACCAATCTCTATTCCTCATTC 58.259 38.462 0.00 0.00 37.17 2.67
4091 6666 8.660295 TCCTCATTCTAACTTAACTAGGTTCA 57.340 34.615 0.00 0.00 0.00 3.18
4092 6667 8.529476 TCCTCATTCTAACTTAACTAGGTTCAC 58.471 37.037 0.00 0.00 0.00 3.18
4093 6668 8.532819 CCTCATTCTAACTTAACTAGGTTCACT 58.467 37.037 0.00 0.00 0.00 3.41
4094 6669 9.360093 CTCATTCTAACTTAACTAGGTTCACTG 57.640 37.037 0.00 0.00 0.00 3.66
4095 6670 8.867097 TCATTCTAACTTAACTAGGTTCACTGT 58.133 33.333 0.00 0.00 0.00 3.55
4096 6671 9.490379 CATTCTAACTTAACTAGGTTCACTGTT 57.510 33.333 0.00 0.00 0.00 3.16
4097 6672 9.708092 ATTCTAACTTAACTAGGTTCACTGTTC 57.292 33.333 0.00 0.00 0.00 3.18
4098 6673 8.474710 TCTAACTTAACTAGGTTCACTGTTCT 57.525 34.615 0.00 0.00 0.00 3.01
4099 6674 8.574737 TCTAACTTAACTAGGTTCACTGTTCTC 58.425 37.037 0.00 0.00 0.00 2.87
4100 6675 6.726490 ACTTAACTAGGTTCACTGTTCTCA 57.274 37.500 0.00 0.00 0.00 3.27
4101 6676 7.120923 ACTTAACTAGGTTCACTGTTCTCAA 57.879 36.000 0.00 0.00 0.00 3.02
4102 6677 7.562135 ACTTAACTAGGTTCACTGTTCTCAAA 58.438 34.615 0.00 0.00 0.00 2.69
4103 6678 8.044908 ACTTAACTAGGTTCACTGTTCTCAAAA 58.955 33.333 0.00 0.00 0.00 2.44
4104 6679 8.795842 TTAACTAGGTTCACTGTTCTCAAAAA 57.204 30.769 0.00 0.00 0.00 1.94
4145 6720 2.743183 CGAAGAGAGCTTTGGGGTATGG 60.743 54.545 0.00 0.00 33.61 2.74
4147 6722 0.548510 GAGAGCTTTGGGGTATGGCT 59.451 55.000 0.00 0.00 35.86 4.75
4155 6730 0.255890 TGGGGTATGGCTTGAGCTTC 59.744 55.000 2.66 0.00 41.70 3.86
4167 6742 5.711506 TGGCTTGAGCTTCTTTTGATGAATA 59.288 36.000 2.66 0.00 41.70 1.75
4184 6759 9.904198 TTGATGAATAATATGTTGACTCCTTCA 57.096 29.630 0.00 0.00 0.00 3.02
4194 6769 6.564709 TGTTGACTCCTTCATTTCTTGATG 57.435 37.500 0.00 0.00 32.84 3.07
4202 6777 4.768968 CCTTCATTTCTTGATGTCCAGGTT 59.231 41.667 0.00 0.00 33.34 3.50
4211 6786 2.304761 TGATGTCCAGGTTACCTTGTCC 59.695 50.000 0.00 0.00 0.00 4.02
4225 6800 2.548480 CCTTGTCCGACAACTTCCTTTC 59.452 50.000 9.99 0.00 33.96 2.62
4228 6803 1.866925 CCGACAACTTCCTTTCGGC 59.133 57.895 0.00 0.00 44.16 5.54
4229 6804 0.882927 CCGACAACTTCCTTTCGGCA 60.883 55.000 0.00 0.00 44.16 5.69
4265 6843 2.481952 GAGAGCCGTGGATATGAAATGC 59.518 50.000 0.00 0.00 0.00 3.56
4268 6846 1.537202 GCCGTGGATATGAAATGCCTC 59.463 52.381 0.00 0.00 0.00 4.70
4274 6852 4.335315 GTGGATATGAAATGCCTCGTTCAA 59.665 41.667 0.00 0.00 37.31 2.69
4294 6872 7.008447 CGTTCAATTTGTTGGTTCGTTAGAAAA 59.992 33.333 0.00 0.00 38.23 2.29
4315 6893 8.076178 AGAAAAGAATCTACGTTTTTCATGGTG 58.924 33.333 18.17 0.00 40.31 4.17
4328 6906 0.729116 CATGGTGAAGCATGGACGAC 59.271 55.000 13.44 0.00 0.00 4.34
4335 6913 1.537814 AAGCATGGACGACGGTGGTA 61.538 55.000 0.00 0.00 0.00 3.25
4364 6942 0.579156 GAAGATAAGCGCGCTTGGAG 59.421 55.000 46.58 1.80 37.47 3.86
4367 6945 1.079127 ATAAGCGCGCTTGGAGTGT 60.079 52.632 46.58 27.70 37.47 3.55
4375 6953 0.737715 CGCTTGGAGTGTGGTAGCTC 60.738 60.000 0.00 0.00 0.00 4.09
4386 6964 0.530744 TGGTAGCTCGTGTTAGCCTG 59.469 55.000 7.85 0.00 43.86 4.85
4430 7008 0.820871 GTTGAGGTGAGAGCGGATCT 59.179 55.000 0.00 0.00 42.61 2.75
4433 7011 0.529555 GAGGTGAGAGCGGATCTTGC 60.530 60.000 0.00 2.74 38.84 4.01
4442 7021 1.509787 CGGATCTTGCGTGCGTTTG 60.510 57.895 0.00 0.00 0.00 2.93
4455 7034 2.031857 GTGCGTTTGTATTTGGGACGAA 60.032 45.455 0.00 0.00 35.90 3.85
4460 7039 5.556470 CGTTTGTATTTGGGACGAATACTG 58.444 41.667 16.26 4.93 39.54 2.74
4470 7049 4.142249 TGGGACGAATACTGTACATGTCAG 60.142 45.833 18.12 18.12 38.68 3.51
4471 7050 4.097437 GGGACGAATACTGTACATGTCAGA 59.903 45.833 23.48 12.59 36.81 3.27
4493 7072 3.581024 ATGCTGCAATGACGATGTTTT 57.419 38.095 6.36 0.00 0.00 2.43
4495 7074 2.253603 GCTGCAATGACGATGTTTTCC 58.746 47.619 0.00 0.00 0.00 3.13
4518 7097 7.646314 TCCTATACTAGTAATCTTGAACGTGC 58.354 38.462 6.70 0.00 0.00 5.34
4519 7098 7.283807 TCCTATACTAGTAATCTTGAACGTGCA 59.716 37.037 6.70 0.00 0.00 4.57
4520 7099 7.919091 CCTATACTAGTAATCTTGAACGTGCAA 59.081 37.037 9.07 9.07 0.00 4.08
4521 7100 9.464714 CTATACTAGTAATCTTGAACGTGCAAT 57.535 33.333 10.00 0.00 0.00 3.56
4522 7101 6.408858 ACTAGTAATCTTGAACGTGCAATG 57.591 37.500 10.00 4.46 0.00 2.82
4523 7102 4.083581 AGTAATCTTGAACGTGCAATGC 57.916 40.909 10.00 0.00 0.00 3.56
4524 7103 1.967762 AATCTTGAACGTGCAATGCG 58.032 45.000 10.00 0.00 0.00 4.73
4525 7104 0.874390 ATCTTGAACGTGCAATGCGT 59.126 45.000 10.00 0.00 45.07 5.24
4526 7105 0.041400 TCTTGAACGTGCAATGCGTG 60.041 50.000 10.00 0.00 42.10 5.34
4527 7106 0.316937 CTTGAACGTGCAATGCGTGT 60.317 50.000 10.00 0.00 42.10 4.49
4528 7107 0.099613 TTGAACGTGCAATGCGTGTT 59.900 45.000 4.37 13.40 42.10 3.32
4529 7108 0.316607 TGAACGTGCAATGCGTGTTC 60.317 50.000 25.43 25.43 42.10 3.18
4530 7109 0.041312 GAACGTGCAATGCGTGTTCT 60.041 50.000 25.11 4.80 42.10 3.01
4531 7110 0.041312 AACGTGCAATGCGTGTTCTC 60.041 50.000 8.73 0.00 42.10 2.87
4532 7111 1.157257 ACGTGCAATGCGTGTTCTCA 61.157 50.000 0.00 0.00 41.33 3.27
4533 7112 0.722469 CGTGCAATGCGTGTTCTCAC 60.722 55.000 0.00 0.00 40.79 3.51
4534 7113 0.588252 GTGCAATGCGTGTTCTCACT 59.412 50.000 0.00 0.00 41.89 3.41
4535 7114 1.798223 GTGCAATGCGTGTTCTCACTA 59.202 47.619 0.00 0.00 41.89 2.74
4536 7115 2.416547 GTGCAATGCGTGTTCTCACTAT 59.583 45.455 0.00 0.00 41.89 2.12
4537 7116 2.672874 TGCAATGCGTGTTCTCACTATC 59.327 45.455 0.00 0.00 41.89 2.08
4538 7117 2.285256 GCAATGCGTGTTCTCACTATCG 60.285 50.000 0.00 0.00 41.89 2.92
4539 7118 3.179048 CAATGCGTGTTCTCACTATCGA 58.821 45.455 0.00 0.00 41.89 3.59
4540 7119 2.257974 TGCGTGTTCTCACTATCGAC 57.742 50.000 0.00 0.00 41.89 4.20
4541 7120 1.538075 TGCGTGTTCTCACTATCGACA 59.462 47.619 0.00 0.00 41.89 4.35
4542 7121 2.030628 TGCGTGTTCTCACTATCGACAA 60.031 45.455 0.00 0.00 41.89 3.18
4543 7122 2.984471 GCGTGTTCTCACTATCGACAAA 59.016 45.455 0.00 0.00 41.89 2.83
4544 7123 3.059570 GCGTGTTCTCACTATCGACAAAG 59.940 47.826 0.00 0.00 41.89 2.77
4545 7124 4.473199 CGTGTTCTCACTATCGACAAAGA 58.527 43.478 0.00 0.00 41.89 2.52
4546 7125 5.096169 CGTGTTCTCACTATCGACAAAGAT 58.904 41.667 0.00 0.00 41.89 2.40
4547 7126 6.255950 CGTGTTCTCACTATCGACAAAGATA 58.744 40.000 0.00 0.00 41.89 1.98
4548 7127 6.745907 CGTGTTCTCACTATCGACAAAGATAA 59.254 38.462 0.00 0.00 41.89 1.75
4549 7128 7.044641 CGTGTTCTCACTATCGACAAAGATAAG 60.045 40.741 0.00 0.00 41.89 1.73
4550 7129 7.755822 GTGTTCTCACTATCGACAAAGATAAGT 59.244 37.037 0.00 0.00 40.98 2.24
4551 7130 8.304596 TGTTCTCACTATCGACAAAGATAAGTT 58.695 33.333 0.00 0.00 33.24 2.66
4552 7131 8.800031 GTTCTCACTATCGACAAAGATAAGTTC 58.200 37.037 0.00 0.00 33.24 3.01
4553 7132 8.051901 TCTCACTATCGACAAAGATAAGTTCA 57.948 34.615 0.00 0.00 33.24 3.18
4554 7133 8.520351 TCTCACTATCGACAAAGATAAGTTCAA 58.480 33.333 0.00 0.00 33.24 2.69
4555 7134 9.307121 CTCACTATCGACAAAGATAAGTTCAAT 57.693 33.333 0.00 0.00 33.24 2.57
4561 7140 8.186178 TCGACAAAGATAAGTTCAATAGAAGC 57.814 34.615 0.00 0.00 33.63 3.86
4562 7141 7.817478 TCGACAAAGATAAGTTCAATAGAAGCA 59.183 33.333 0.00 0.00 33.63 3.91
4563 7142 8.607459 CGACAAAGATAAGTTCAATAGAAGCAT 58.393 33.333 0.00 0.00 33.63 3.79
4689 7269 9.874205 TCTTTGATCCCAAATAATTCACAAATC 57.126 29.630 0.00 0.00 41.03 2.17
4690 7270 9.656040 CTTTGATCCCAAATAATTCACAAATCA 57.344 29.630 0.00 0.00 41.03 2.57
4739 7319 2.492012 AGCTGTGAGTGCTTTTCAGAG 58.508 47.619 0.00 5.78 37.52 3.35
4784 7364 4.612264 AAATTGCAGCTTGTGAGGAAAT 57.388 36.364 0.00 0.00 0.00 2.17
4785 7365 5.726980 AAATTGCAGCTTGTGAGGAAATA 57.273 34.783 0.00 0.00 0.00 1.40
4800 7380 6.205658 GTGAGGAAATAGAAACAAAGCAGAGT 59.794 38.462 0.00 0.00 0.00 3.24
4813 7393 5.525378 ACAAAGCAGAGTTTAGTCACTTGAG 59.475 40.000 0.00 0.00 0.00 3.02
4814 7394 4.946478 AGCAGAGTTTAGTCACTTGAGT 57.054 40.909 0.00 0.00 0.00 3.41
4815 7395 5.283457 AGCAGAGTTTAGTCACTTGAGTT 57.717 39.130 0.00 0.00 0.00 3.01
4816 7396 5.053145 AGCAGAGTTTAGTCACTTGAGTTG 58.947 41.667 0.00 0.00 0.00 3.16
4817 7397 4.811557 GCAGAGTTTAGTCACTTGAGTTGT 59.188 41.667 0.00 0.00 0.00 3.32
4818 7398 5.983720 GCAGAGTTTAGTCACTTGAGTTGTA 59.016 40.000 0.00 0.00 0.00 2.41
4819 7399 6.074249 GCAGAGTTTAGTCACTTGAGTTGTAC 60.074 42.308 0.00 0.00 0.00 2.90
4820 7400 6.978659 CAGAGTTTAGTCACTTGAGTTGTACA 59.021 38.462 0.00 0.00 0.00 2.90
4821 7401 7.653713 CAGAGTTTAGTCACTTGAGTTGTACAT 59.346 37.037 0.00 0.00 0.00 2.29
4822 7402 7.653713 AGAGTTTAGTCACTTGAGTTGTACATG 59.346 37.037 0.00 0.00 0.00 3.21
4823 7403 6.706270 AGTTTAGTCACTTGAGTTGTACATGG 59.294 38.462 0.00 0.00 0.00 3.66
4824 7404 4.008074 AGTCACTTGAGTTGTACATGGG 57.992 45.455 0.00 0.00 0.00 4.00
4825 7405 2.484264 GTCACTTGAGTTGTACATGGGC 59.516 50.000 0.00 0.00 0.00 5.36
4826 7406 2.105649 TCACTTGAGTTGTACATGGGCA 59.894 45.455 0.00 0.00 0.00 5.36
4827 7407 3.084039 CACTTGAGTTGTACATGGGCAT 58.916 45.455 0.00 0.00 0.00 4.40
4828 7408 3.507233 CACTTGAGTTGTACATGGGCATT 59.493 43.478 0.00 0.00 0.00 3.56
4829 7409 3.507233 ACTTGAGTTGTACATGGGCATTG 59.493 43.478 0.00 0.00 0.00 2.82
4830 7410 1.818060 TGAGTTGTACATGGGCATTGC 59.182 47.619 0.00 0.00 0.00 3.56
4831 7411 1.818060 GAGTTGTACATGGGCATTGCA 59.182 47.619 11.39 0.00 0.00 4.08
4832 7412 1.820519 AGTTGTACATGGGCATTGCAG 59.179 47.619 11.39 0.00 0.00 4.41
4833 7413 1.818060 GTTGTACATGGGCATTGCAGA 59.182 47.619 11.39 0.00 0.00 4.26
4834 7414 1.462616 TGTACATGGGCATTGCAGAC 58.537 50.000 11.39 0.66 0.00 3.51
4835 7415 0.740737 GTACATGGGCATTGCAGACC 59.259 55.000 11.39 3.19 0.00 3.85
4836 7416 0.330941 TACATGGGCATTGCAGACCA 59.669 50.000 11.39 2.47 37.41 4.02
4837 7417 0.542467 ACATGGGCATTGCAGACCAA 60.542 50.000 11.39 0.00 36.44 3.67
4838 7418 0.174845 CATGGGCATTGCAGACCAAG 59.825 55.000 11.39 0.00 36.76 3.61
4839 7419 0.251922 ATGGGCATTGCAGACCAAGT 60.252 50.000 11.39 0.00 36.76 3.16
4840 7420 0.469705 TGGGCATTGCAGACCAAGTT 60.470 50.000 11.39 0.00 36.76 2.66
4841 7421 0.681175 GGGCATTGCAGACCAAGTTT 59.319 50.000 11.39 0.00 36.76 2.66
4842 7422 1.337167 GGGCATTGCAGACCAAGTTTC 60.337 52.381 11.39 0.00 36.76 2.78
4843 7423 1.666888 GGCATTGCAGACCAAGTTTCG 60.667 52.381 11.39 0.00 36.76 3.46
4844 7424 1.689959 CATTGCAGACCAAGTTTCGC 58.310 50.000 0.00 0.00 36.76 4.70
4847 7427 0.179059 TGCAGACCAAGTTTCGCTGA 60.179 50.000 0.00 0.00 0.00 4.26
4851 7431 0.234884 GACCAAGTTTCGCTGAACCG 59.765 55.000 0.00 0.00 0.00 4.44
4861 7441 2.046892 CTGAACCGGCACCAGGAG 60.047 66.667 0.00 0.00 0.00 3.69
4862 7442 2.525629 TGAACCGGCACCAGGAGA 60.526 61.111 0.00 0.00 0.00 3.71
4863 7443 1.903877 CTGAACCGGCACCAGGAGAT 61.904 60.000 0.00 0.00 0.00 2.75
4864 7444 1.153349 GAACCGGCACCAGGAGATC 60.153 63.158 0.00 0.00 0.00 2.75
4866 7446 1.488705 AACCGGCACCAGGAGATCAA 61.489 55.000 0.00 0.00 0.00 2.57
4867 7447 1.299648 CCGGCACCAGGAGATCAAA 59.700 57.895 0.00 0.00 0.00 2.69
4868 7448 0.745845 CCGGCACCAGGAGATCAAAG 60.746 60.000 0.00 0.00 0.00 2.77
4869 7449 0.036010 CGGCACCAGGAGATCAAAGT 60.036 55.000 0.00 0.00 0.00 2.66
4870 7450 1.457346 GGCACCAGGAGATCAAAGTG 58.543 55.000 0.00 0.00 0.00 3.16
4877 7457 3.307691 CCAGGAGATCAAAGTGGCAAGTA 60.308 47.826 0.00 0.00 0.00 2.24
4881 7461 6.037610 CAGGAGATCAAAGTGGCAAGTATTAC 59.962 42.308 0.00 0.00 0.00 1.89
4884 7464 5.882557 AGATCAAAGTGGCAAGTATTACTGG 59.117 40.000 0.00 0.00 0.00 4.00
4903 7483 2.091555 TGGGAGGCACTAAAAGGTGTTT 60.092 45.455 0.00 0.00 41.55 2.83
4905 7485 3.243737 GGGAGGCACTAAAAGGTGTTTTG 60.244 47.826 0.00 0.00 41.55 2.44
4911 7491 4.629634 GCACTAAAAGGTGTTTTGCAGTTT 59.370 37.500 0.00 0.00 36.51 2.66
4920 7500 4.693095 GGTGTTTTGCAGTTTGAAGGAAAA 59.307 37.500 0.00 0.00 33.58 2.29
4929 7509 6.368516 TGCAGTTTGAAGGAAAAGAAACAAAG 59.631 34.615 0.00 0.00 31.92 2.77
4968 7548 2.080693 GTTGTACATGGACATTGCGGA 58.919 47.619 12.63 0.00 0.00 5.54
4988 7568 4.035208 CGGAGCAAGAAGTGTTAAACAAGT 59.965 41.667 0.00 0.00 0.00 3.16
5022 7663 0.555769 AGGGACTGCCAACCAGAAAA 59.444 50.000 0.00 0.00 44.64 2.29
5040 7681 7.231317 ACCAGAAAAGATTAGCAAATCAACTGA 59.769 33.333 0.00 0.00 43.44 3.41
5044 7685 9.500864 GAAAAGATTAGCAAATCAACTGATCTC 57.499 33.333 0.00 0.00 43.44 2.75
5058 7699 8.818141 TCAACTGATCTCGGATTTCATATAAC 57.182 34.615 0.00 0.00 0.00 1.89
5059 7700 7.872993 TCAACTGATCTCGGATTTCATATAACC 59.127 37.037 0.00 0.00 0.00 2.85
5080 7870 5.671493 ACCAACAGAAATATTACTCCCTCG 58.329 41.667 0.00 0.00 0.00 4.63
5081 7871 5.189145 ACCAACAGAAATATTACTCCCTCGT 59.811 40.000 0.00 0.00 0.00 4.18
5082 7872 6.113411 CCAACAGAAATATTACTCCCTCGTT 58.887 40.000 0.00 0.00 0.00 3.85
5083 7873 6.258068 CCAACAGAAATATTACTCCCTCGTTC 59.742 42.308 0.00 0.00 0.00 3.95
5084 7874 6.540438 ACAGAAATATTACTCCCTCGTTCA 57.460 37.500 0.00 0.00 0.00 3.18
5085 7875 6.338937 ACAGAAATATTACTCCCTCGTTCAC 58.661 40.000 0.00 0.00 0.00 3.18
5086 7876 6.154706 ACAGAAATATTACTCCCTCGTTCACT 59.845 38.462 0.00 0.00 0.00 3.41
5087 7877 7.042335 CAGAAATATTACTCCCTCGTTCACTT 58.958 38.462 0.00 0.00 0.00 3.16
5088 7878 7.549488 CAGAAATATTACTCCCTCGTTCACTTT 59.451 37.037 0.00 0.00 0.00 2.66
5089 7879 8.101419 AGAAATATTACTCCCTCGTTCACTTTT 58.899 33.333 0.00 0.00 0.00 2.27
5090 7880 7.611213 AATATTACTCCCTCGTTCACTTTTG 57.389 36.000 0.00 0.00 0.00 2.44
5091 7881 4.411256 TTACTCCCTCGTTCACTTTTGT 57.589 40.909 0.00 0.00 0.00 2.83
5092 7882 5.534207 TTACTCCCTCGTTCACTTTTGTA 57.466 39.130 0.00 0.00 0.00 2.41
5093 7883 4.411256 ACTCCCTCGTTCACTTTTGTAA 57.589 40.909 0.00 0.00 0.00 2.41
5094 7884 4.377897 ACTCCCTCGTTCACTTTTGTAAG 58.622 43.478 0.00 0.00 37.40 2.34
5095 7885 4.141779 ACTCCCTCGTTCACTTTTGTAAGT 60.142 41.667 0.00 0.00 45.40 2.24
5096 7886 4.773013 TCCCTCGTTCACTTTTGTAAGTT 58.227 39.130 0.00 0.00 41.85 2.66
5097 7887 4.573201 TCCCTCGTTCACTTTTGTAAGTTG 59.427 41.667 0.00 0.00 41.85 3.16
5098 7888 4.334481 CCCTCGTTCACTTTTGTAAGTTGT 59.666 41.667 0.00 0.00 41.85 3.32
5099 7889 5.163693 CCCTCGTTCACTTTTGTAAGTTGTT 60.164 40.000 0.00 0.00 41.85 2.83
5100 7890 6.319399 CCTCGTTCACTTTTGTAAGTTGTTT 58.681 36.000 0.00 0.00 41.85 2.83
5101 7891 6.468000 CCTCGTTCACTTTTGTAAGTTGTTTC 59.532 38.462 0.00 0.00 41.85 2.78
5102 7892 6.900189 TCGTTCACTTTTGTAAGTTGTTTCA 58.100 32.000 0.00 0.00 41.85 2.69
5103 7893 7.018826 TCGTTCACTTTTGTAAGTTGTTTCAG 58.981 34.615 0.00 0.00 41.85 3.02
5104 7894 7.018826 CGTTCACTTTTGTAAGTTGTTTCAGA 58.981 34.615 0.00 0.00 41.85 3.27
5105 7895 7.007099 CGTTCACTTTTGTAAGTTGTTTCAGAC 59.993 37.037 0.00 0.00 41.85 3.51
5106 7896 7.441890 TCACTTTTGTAAGTTGTTTCAGACA 57.558 32.000 0.00 0.00 41.85 3.41
5107 7897 7.877003 TCACTTTTGTAAGTTGTTTCAGACAA 58.123 30.769 0.00 0.00 41.85 3.18
5119 7909 6.072112 TGTTTCAGACAACTCAAAATAGGC 57.928 37.500 0.00 0.00 34.69 3.93
5120 7910 5.592282 TGTTTCAGACAACTCAAAATAGGCA 59.408 36.000 0.00 0.00 34.69 4.75
5121 7911 5.947228 TTCAGACAACTCAAAATAGGCAG 57.053 39.130 0.00 0.00 0.00 4.85
5122 7912 4.973168 TCAGACAACTCAAAATAGGCAGT 58.027 39.130 0.00 0.00 0.00 4.40
5123 7913 5.376625 TCAGACAACTCAAAATAGGCAGTT 58.623 37.500 0.00 0.00 0.00 3.16
5124 7914 5.827797 TCAGACAACTCAAAATAGGCAGTTT 59.172 36.000 0.00 0.00 0.00 2.66
5125 7915 6.321181 TCAGACAACTCAAAATAGGCAGTTTT 59.679 34.615 0.00 0.00 0.00 2.43
5126 7916 6.418819 CAGACAACTCAAAATAGGCAGTTTTG 59.581 38.462 16.47 16.47 44.10 2.44
5142 7932 5.969741 CAGTTTTGCACATTGTCTGAAATG 58.030 37.500 0.00 9.50 42.21 2.32
5144 7934 5.750067 AGTTTTGCACATTGTCTGAAATGTC 59.250 36.000 12.25 9.51 45.47 3.06
5145 7935 5.518848 TTTGCACATTGTCTGAAATGTCT 57.481 34.783 12.25 0.00 45.47 3.41
5146 7936 5.518848 TTGCACATTGTCTGAAATGTCTT 57.481 34.783 12.25 0.00 45.47 3.01
5147 7937 5.112220 TGCACATTGTCTGAAATGTCTTC 57.888 39.130 12.25 7.82 45.47 2.87
5148 7938 4.579753 TGCACATTGTCTGAAATGTCTTCA 59.420 37.500 12.25 9.40 45.47 3.02
5149 7939 5.067544 TGCACATTGTCTGAAATGTCTTCAA 59.932 36.000 12.25 0.00 45.47 2.69
5150 7940 5.628193 GCACATTGTCTGAAATGTCTTCAAG 59.372 40.000 12.25 5.42 45.47 3.02
5151 7941 6.147581 CACATTGTCTGAAATGTCTTCAAGG 58.852 40.000 12.25 0.00 45.47 3.61
5152 7942 4.836125 TTGTCTGAAATGTCTTCAAGGC 57.164 40.909 0.00 0.00 0.00 4.35
5153 7943 3.149196 TGTCTGAAATGTCTTCAAGGCC 58.851 45.455 0.00 0.00 0.00 5.19
5154 7944 3.181440 TGTCTGAAATGTCTTCAAGGCCT 60.181 43.478 0.00 0.00 0.00 5.19
5155 7945 3.823304 GTCTGAAATGTCTTCAAGGCCTT 59.177 43.478 13.78 13.78 0.00 4.35
5156 7946 5.003804 GTCTGAAATGTCTTCAAGGCCTTA 58.996 41.667 20.00 2.00 0.00 2.69
5157 7947 5.649831 GTCTGAAATGTCTTCAAGGCCTTAT 59.350 40.000 20.00 3.68 0.00 1.73
5158 7948 6.823689 GTCTGAAATGTCTTCAAGGCCTTATA 59.176 38.462 20.00 6.65 0.00 0.98
5159 7949 7.336931 GTCTGAAATGTCTTCAAGGCCTTATAA 59.663 37.037 20.00 14.54 0.00 0.98
5160 7950 7.888021 TCTGAAATGTCTTCAAGGCCTTATAAA 59.112 33.333 20.00 11.96 0.00 1.40
5161 7951 8.415950 TGAAATGTCTTCAAGGCCTTATAAAA 57.584 30.769 20.00 9.43 0.00 1.52
5162 7952 8.522830 TGAAATGTCTTCAAGGCCTTATAAAAG 58.477 33.333 20.00 18.05 0.00 2.27
5163 7953 8.422577 AAATGTCTTCAAGGCCTTATAAAAGT 57.577 30.769 20.00 0.00 0.00 2.66
5164 7954 6.817765 TGTCTTCAAGGCCTTATAAAAGTG 57.182 37.500 20.00 3.72 0.00 3.16
5165 7955 6.539173 TGTCTTCAAGGCCTTATAAAAGTGA 58.461 36.000 20.00 6.54 0.00 3.41
5166 7956 7.001674 TGTCTTCAAGGCCTTATAAAAGTGAA 58.998 34.615 20.00 14.48 0.00 3.18
5167 7957 7.040686 TGTCTTCAAGGCCTTATAAAAGTGAAC 60.041 37.037 20.00 13.04 0.00 3.18
5168 7958 7.001674 TCTTCAAGGCCTTATAAAAGTGAACA 58.998 34.615 20.00 0.21 0.00 3.18
5169 7959 6.817765 TCAAGGCCTTATAAAAGTGAACAG 57.182 37.500 20.00 0.00 0.00 3.16
5170 7960 6.539173 TCAAGGCCTTATAAAAGTGAACAGA 58.461 36.000 20.00 2.74 0.00 3.41
5171 7961 6.655003 TCAAGGCCTTATAAAAGTGAACAGAG 59.345 38.462 20.00 0.00 0.00 3.35
5172 7962 5.501156 AGGCCTTATAAAAGTGAACAGAGG 58.499 41.667 0.00 0.00 0.00 3.69
5173 7963 5.250774 AGGCCTTATAAAAGTGAACAGAGGA 59.749 40.000 0.00 0.00 0.00 3.71
5174 7964 5.944007 GGCCTTATAAAAGTGAACAGAGGAA 59.056 40.000 0.00 0.00 0.00 3.36
5175 7965 6.094186 GGCCTTATAAAAGTGAACAGAGGAAG 59.906 42.308 0.00 0.00 0.00 3.46
5176 7966 6.655425 GCCTTATAAAAGTGAACAGAGGAAGT 59.345 38.462 0.00 0.00 0.00 3.01
5177 7967 7.822822 GCCTTATAAAAGTGAACAGAGGAAGTA 59.177 37.037 0.00 0.00 0.00 2.24
5178 7968 9.892130 CCTTATAAAAGTGAACAGAGGAAGTAT 57.108 33.333 0.00 0.00 0.00 2.12
5215 8005 6.753744 TCACTCAACTGATCATGTAAGAATCG 59.246 38.462 0.00 0.00 0.00 3.34
5227 8017 9.669353 ATCATGTAAGAATCGATTTTAATGTGC 57.331 29.630 12.81 0.00 0.00 4.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 9.309516 GAAGCATTATCACATTGATGTCAAATT 57.690 29.630 0.00 0.00 39.39 1.82
54 55 8.471609 TGAAGCATTATCACATTGATGTCAAAT 58.528 29.630 0.00 0.00 39.39 2.32
113 114 8.480643 AAACAAAAATAACAAATTCGACACCA 57.519 26.923 0.00 0.00 0.00 4.17
114 115 8.059502 GGAAACAAAAATAACAAATTCGACACC 58.940 33.333 0.00 0.00 0.00 4.16
232 235 7.438564 ACTCCCGTAGCACATTTTAAATTTTT 58.561 30.769 0.00 0.00 0.00 1.94
234 237 6.584185 ACTCCCGTAGCACATTTTAAATTT 57.416 33.333 0.00 0.00 0.00 1.82
235 238 7.554835 TCATACTCCCGTAGCACATTTTAAATT 59.445 33.333 0.00 0.00 0.00 1.82
236 239 7.051623 TCATACTCCCGTAGCACATTTTAAAT 58.948 34.615 0.00 0.00 0.00 1.40
239 242 5.601583 TCATACTCCCGTAGCACATTTTA 57.398 39.130 0.00 0.00 0.00 1.52
240 243 4.481368 TCATACTCCCGTAGCACATTTT 57.519 40.909 0.00 0.00 0.00 1.82
434 437 5.015178 ACTCATCATACTCCCCCTTTCAAAA 59.985 40.000 0.00 0.00 0.00 2.44
435 438 4.540099 ACTCATCATACTCCCCCTTTCAAA 59.460 41.667 0.00 0.00 0.00 2.69
436 439 4.111577 ACTCATCATACTCCCCCTTTCAA 58.888 43.478 0.00 0.00 0.00 2.69
437 440 3.736094 ACTCATCATACTCCCCCTTTCA 58.264 45.455 0.00 0.00 0.00 2.69
438 441 4.779993 AACTCATCATACTCCCCCTTTC 57.220 45.455 0.00 0.00 0.00 2.62
439 442 5.536497 AAAACTCATCATACTCCCCCTTT 57.464 39.130 0.00 0.00 0.00 3.11
440 443 5.536497 AAAAACTCATCATACTCCCCCTT 57.464 39.130 0.00 0.00 0.00 3.95
465 468 5.661503 TCATGCTCCCCCTATGATTAAAA 57.338 39.130 0.00 0.00 0.00 1.52
467 470 4.851540 TCATCATGCTCCCCCTATGATTAA 59.148 41.667 0.00 0.00 38.98 1.40
469 472 3.262842 TCATCATGCTCCCCCTATGATT 58.737 45.455 0.00 0.00 38.98 2.57
470 473 2.844966 CTCATCATGCTCCCCCTATGAT 59.155 50.000 0.00 0.00 41.01 2.45
472 475 1.983691 ACTCATCATGCTCCCCCTATG 59.016 52.381 0.00 0.00 0.00 2.23
474 477 1.770658 CAACTCATCATGCTCCCCCTA 59.229 52.381 0.00 0.00 0.00 3.53
475 478 0.549950 CAACTCATCATGCTCCCCCT 59.450 55.000 0.00 0.00 0.00 4.79
476 479 0.548031 TCAACTCATCATGCTCCCCC 59.452 55.000 0.00 0.00 0.00 5.40
477 480 2.653234 ATCAACTCATCATGCTCCCC 57.347 50.000 0.00 0.00 0.00 4.81
478 481 5.591877 AGTTTTATCAACTCATCATGCTCCC 59.408 40.000 0.00 0.00 0.00 4.30
479 482 6.493116 CAGTTTTATCAACTCATCATGCTCC 58.507 40.000 0.00 0.00 0.00 4.70
482 485 5.643664 TGCAGTTTTATCAACTCATCATGC 58.356 37.500 0.00 0.00 0.00 4.06
483 486 7.811236 ACTTTGCAGTTTTATCAACTCATCATG 59.189 33.333 0.00 0.00 0.00 3.07
511 514 1.830279 TCTCCAGCTCCAGCAAAATG 58.170 50.000 0.48 0.00 45.16 2.32
512 515 2.444421 CTTCTCCAGCTCCAGCAAAAT 58.556 47.619 0.48 0.00 45.16 1.82
513 516 1.546323 CCTTCTCCAGCTCCAGCAAAA 60.546 52.381 0.48 0.00 45.16 2.44
514 517 0.037303 CCTTCTCCAGCTCCAGCAAA 59.963 55.000 0.48 0.00 45.16 3.68
515 518 1.130054 ACCTTCTCCAGCTCCAGCAA 61.130 55.000 0.48 0.00 45.16 3.91
516 519 1.537397 ACCTTCTCCAGCTCCAGCA 60.537 57.895 0.48 0.00 45.16 4.41
517 520 1.078567 CACCTTCTCCAGCTCCAGC 60.079 63.158 0.00 0.00 42.49 4.85
518 521 0.036577 CACACCTTCTCCAGCTCCAG 60.037 60.000 0.00 0.00 0.00 3.86
524 527 4.568359 CGAATGAATACACACCTTCTCCAG 59.432 45.833 0.00 0.00 0.00 3.86
525 528 4.020573 ACGAATGAATACACACCTTCTCCA 60.021 41.667 0.00 0.00 0.00 3.86
526 529 4.504858 ACGAATGAATACACACCTTCTCC 58.495 43.478 0.00 0.00 0.00 3.71
527 530 6.481954 AAACGAATGAATACACACCTTCTC 57.518 37.500 0.00 0.00 0.00 2.87
529 532 5.313623 CGAAACGAATGAATACACACCTTC 58.686 41.667 0.00 0.00 0.00 3.46
531 534 3.124636 GCGAAACGAATGAATACACACCT 59.875 43.478 0.00 0.00 0.00 4.00
546 549 0.937699 TCTGTCAACTCCGCGAAACG 60.938 55.000 8.23 0.00 43.15 3.60
547 550 1.214367 TTCTGTCAACTCCGCGAAAC 58.786 50.000 8.23 0.00 0.00 2.78
549 552 2.163818 ATTTCTGTCAACTCCGCGAA 57.836 45.000 8.23 0.00 0.00 4.70
550 553 2.163818 AATTTCTGTCAACTCCGCGA 57.836 45.000 8.23 0.00 0.00 5.87
551 554 2.734606 TGTAATTTCTGTCAACTCCGCG 59.265 45.455 0.00 0.00 0.00 6.46
552 555 3.120304 GGTGTAATTTCTGTCAACTCCGC 60.120 47.826 0.00 0.00 0.00 5.54
553 556 3.435671 GGGTGTAATTTCTGTCAACTCCG 59.564 47.826 0.00 0.00 0.00 4.63
554 557 4.652822 AGGGTGTAATTTCTGTCAACTCC 58.347 43.478 0.00 0.00 0.00 3.85
558 561 4.072131 GCAGAGGGTGTAATTTCTGTCAA 58.928 43.478 4.87 0.00 39.33 3.18
559 562 3.559171 GGCAGAGGGTGTAATTTCTGTCA 60.559 47.826 2.96 0.00 40.90 3.58
560 563 3.010420 GGCAGAGGGTGTAATTTCTGTC 58.990 50.000 4.87 0.00 39.33 3.51
562 565 2.749621 GTGGCAGAGGGTGTAATTTCTG 59.250 50.000 0.00 0.00 39.94 3.02
575 578 1.298157 TTCATTTCGCGGTGGCAGAG 61.298 55.000 6.13 0.00 39.92 3.35
713 716 2.586079 ATGAGAATGACGGCGGCG 60.586 61.111 31.06 31.06 0.00 6.46
727 745 1.252215 TGGTCACGGGTAAGCGATGA 61.252 55.000 0.00 0.00 0.00 2.92
744 762 4.742201 CAGAGGACCGCCACGTGG 62.742 72.222 30.66 30.66 39.41 4.94
845 863 3.500642 GGCGGCTTCTTCCTTCGC 61.501 66.667 0.00 0.00 44.80 4.70
917 935 1.263356 GGCCAAAAACTAAGGTCCCC 58.737 55.000 0.00 0.00 0.00 4.81
918 936 1.893137 CTGGCCAAAAACTAAGGTCCC 59.107 52.381 7.01 0.00 0.00 4.46
972 990 1.062587 GATCGAATCACCTGCAAACGG 59.937 52.381 0.00 0.00 0.00 4.44
975 993 1.368641 CGGATCGAATCACCTGCAAA 58.631 50.000 0.00 0.00 0.00 3.68
1095 1119 6.250344 AGTTTTTGGTTAAATACTCGCTCC 57.750 37.500 0.00 0.00 34.37 4.70
1096 1120 7.095102 TGGTAGTTTTTGGTTAAATACTCGCTC 60.095 37.037 0.00 0.00 38.47 5.03
1097 1121 6.711645 TGGTAGTTTTTGGTTAAATACTCGCT 59.288 34.615 0.00 0.00 38.47 4.93
1138 1162 6.592798 TTGTAAAGTGGTAGTTTTCTGTCG 57.407 37.500 0.00 0.00 0.00 4.35
1160 1184 6.413783 AGTGGTAATTTTCGGGACAAAATT 57.586 33.333 9.41 9.41 44.49 1.82
1216 1240 1.123038 GCAAAGCGAGCAATTTTCACG 59.877 47.619 0.00 0.00 0.00 4.35
1224 1248 1.391157 AACCCAAGCAAAGCGAGCAA 61.391 50.000 0.00 0.00 0.00 3.91
1362 1453 3.414700 GGTTGCACGACGAGCTGG 61.415 66.667 17.92 0.00 0.00 4.85
2286 2777 1.950909 CCGTGGCAGAAAACTACCAAA 59.049 47.619 0.00 0.00 33.03 3.28
2325 2816 6.472808 CCACTTTACGATTTTGTTCCGAAAAA 59.527 34.615 0.00 0.00 0.00 1.94
2332 2823 8.845942 AAAACTACCACTTTACGATTTTGTTC 57.154 30.769 0.00 0.00 0.00 3.18
2333 2824 8.680001 AGAAAACTACCACTTTACGATTTTGTT 58.320 29.630 0.00 0.00 0.00 2.83
2404 2895 3.507009 GACGACGACCTCCTCCGG 61.507 72.222 0.00 0.00 0.00 5.14
2405 2896 2.049475 GATGACGACGACCTCCTCCG 62.049 65.000 0.00 0.00 0.00 4.63
2523 3036 8.220021 ATGTAAACATGCAGAGGTCCTAACCA 62.220 42.308 0.00 0.00 40.70 3.67
2561 3817 6.405286 CGAGAAACACTATCCTCTCAGATGTT 60.405 42.308 0.00 0.00 35.12 2.71
2577 3833 0.109226 AGCTACCGCTCGAGAAACAC 60.109 55.000 18.75 0.00 45.15 3.32
2588 3844 3.695816 GAATTTGATTCCAAGCTACCGC 58.304 45.455 0.00 0.00 33.23 5.68
2620 3876 3.307242 CGCACTAAAGTCTAATGAGCACC 59.693 47.826 0.00 0.00 0.00 5.01
2634 4449 4.901868 AGAATACCCTTGAACGCACTAAA 58.098 39.130 0.00 0.00 0.00 1.85
2637 4452 3.259876 TGTAGAATACCCTTGAACGCACT 59.740 43.478 0.00 0.00 42.12 4.40
2638 4453 3.592059 TGTAGAATACCCTTGAACGCAC 58.408 45.455 0.00 0.00 42.12 5.34
2649 4464 9.448438 TGGCAATTATCATACATGTAGAATACC 57.552 33.333 11.91 12.13 42.12 2.73
2674 4491 2.210116 AGAGTAACACTTGTGCGGTTG 58.790 47.619 0.10 0.00 0.00 3.77
2676 4493 3.955650 ATAGAGTAACACTTGTGCGGT 57.044 42.857 0.10 0.00 0.00 5.68
2678 4495 5.805486 ACATGTATAGAGTAACACTTGTGCG 59.195 40.000 0.00 0.00 30.72 5.34
2717 4534 1.589803 ACCAGTTAGTGTGCGTTTCC 58.410 50.000 0.00 0.00 0.00 3.13
2723 4540 5.438761 AATTTCTCAACCAGTTAGTGTGC 57.561 39.130 0.00 0.00 0.00 4.57
2733 4550 7.060421 ACACCTCTCTTTTAATTTCTCAACCA 58.940 34.615 0.00 0.00 0.00 3.67
2751 4568 6.358178 TCGAAGTGAGAATATAGACACCTCT 58.642 40.000 0.00 0.00 34.33 3.69
2855 4672 2.806244 GCTGAAACACGGTGTCTGTAAT 59.194 45.455 15.09 0.00 0.00 1.89
2867 4684 4.639135 AAGAAAGACTTGGCTGAAACAC 57.361 40.909 0.00 0.00 37.45 3.32
2876 4717 5.359860 ACTTGGGTTGTTAAGAAAGACTTGG 59.640 40.000 0.00 0.00 39.38 3.61
2894 4735 7.710475 AGTGAAATGAAATACACAAAACTTGGG 59.290 33.333 0.00 0.00 40.79 4.12
2903 4744 8.106462 TCCCAGATTAGTGAAATGAAATACACA 58.894 33.333 0.00 0.00 36.61 3.72
2908 4749 8.552296 ACTACTCCCAGATTAGTGAAATGAAAT 58.448 33.333 0.00 0.00 29.13 2.17
2909 4750 7.918076 ACTACTCCCAGATTAGTGAAATGAAA 58.082 34.615 0.00 0.00 29.13 2.69
2910 4751 7.496346 ACTACTCCCAGATTAGTGAAATGAA 57.504 36.000 0.00 0.00 29.13 2.57
2911 4752 8.059461 TCTACTACTCCCAGATTAGTGAAATGA 58.941 37.037 5.23 0.00 31.97 2.57
2934 4775 8.779303 TCGAAAGCTAAAACAATGAAATGTCTA 58.221 29.630 0.00 0.00 31.81 2.59
2935 4776 7.591426 GTCGAAAGCTAAAACAATGAAATGTCT 59.409 33.333 0.00 0.00 31.81 3.41
2936 4777 7.408290 CGTCGAAAGCTAAAACAATGAAATGTC 60.408 37.037 0.00 0.00 31.81 3.06
2961 4802 8.475331 TCAAATTTAAGCCTAAGTAAGAGTCG 57.525 34.615 0.00 0.00 0.00 4.18
2979 4820 5.697633 GCAAGGATGTGACATGTTCAAATTT 59.302 36.000 1.23 0.00 31.56 1.82
2985 4826 4.445452 AATGCAAGGATGTGACATGTTC 57.555 40.909 1.23 0.00 0.00 3.18
2988 4829 6.392354 AGTTTTAATGCAAGGATGTGACATG 58.608 36.000 1.23 0.00 0.00 3.21
3187 5654 1.071699 GGGTGTGAAGCTCTGTACCAA 59.928 52.381 10.96 0.00 0.00 3.67
3231 5698 4.226761 GGATGTAAGCAAAAACTGTTCCG 58.773 43.478 0.00 0.00 0.00 4.30
3291 5758 6.071447 TGCTTGGCTAATGCAGAGAAAATTAA 60.071 34.615 2.62 0.00 41.91 1.40
3314 5781 1.201965 GCTGGCGCTCGATATAATTGC 60.202 52.381 7.64 0.00 0.00 3.56
3353 5820 0.880278 TGCAGAAGCGTCCACTTCAC 60.880 55.000 7.01 0.00 46.97 3.18
3361 5828 4.522460 GCTTGTTGCAGAAGCGTC 57.478 55.556 14.63 0.00 46.23 5.19
3372 5839 3.276857 CATGCTATCCTGTGAGCTTGTT 58.723 45.455 0.00 0.00 38.42 2.83
3413 5880 1.806542 CAGCCTTAACACAATGCGTCT 59.193 47.619 0.00 0.00 0.00 4.18
3417 5884 3.855689 ACATCAGCCTTAACACAATGC 57.144 42.857 0.00 0.00 0.00 3.56
3575 6043 4.083855 TGTCTTCGTCAATCAGTTCATTGC 60.084 41.667 0.00 0.00 34.26 3.56
3577 6045 4.153117 GCTGTCTTCGTCAATCAGTTCATT 59.847 41.667 0.00 0.00 0.00 2.57
3664 6132 7.339466 ACATCTTCACAAGAGTAAAACAAGGTT 59.661 33.333 0.00 0.00 41.61 3.50
3674 6142 9.219603 CCTGAATTAAACATCTTCACAAGAGTA 57.780 33.333 0.00 0.00 41.61 2.59
3676 6144 8.103948 ACCTGAATTAAACATCTTCACAAGAG 57.896 34.615 0.00 0.00 41.61 2.85
3701 6259 6.991938 ACAGCCAACAATTTTAGCATCTAAA 58.008 32.000 0.00 0.00 0.00 1.85
3702 6260 6.588719 ACAGCCAACAATTTTAGCATCTAA 57.411 33.333 0.00 0.00 0.00 2.10
3703 6261 6.015519 ACAACAGCCAACAATTTTAGCATCTA 60.016 34.615 0.00 0.00 0.00 1.98
3704 6262 5.221501 ACAACAGCCAACAATTTTAGCATCT 60.222 36.000 0.00 0.00 0.00 2.90
3705 6263 4.990426 ACAACAGCCAACAATTTTAGCATC 59.010 37.500 0.00 0.00 0.00 3.91
3706 6264 4.959723 ACAACAGCCAACAATTTTAGCAT 58.040 34.783 0.00 0.00 0.00 3.79
3707 6265 4.399004 ACAACAGCCAACAATTTTAGCA 57.601 36.364 0.00 0.00 0.00 3.49
3708 6266 5.293079 TGAAACAACAGCCAACAATTTTAGC 59.707 36.000 0.00 0.00 0.00 3.09
3709 6267 6.238076 GGTGAAACAACAGCCAACAATTTTAG 60.238 38.462 0.00 0.00 39.98 1.85
3710 6268 5.582665 GGTGAAACAACAGCCAACAATTTTA 59.417 36.000 0.00 0.00 39.98 1.52
3711 6269 4.394610 GGTGAAACAACAGCCAACAATTTT 59.605 37.500 0.00 0.00 39.98 1.82
3712 6270 3.938334 GGTGAAACAACAGCCAACAATTT 59.062 39.130 0.00 0.00 39.98 1.82
3713 6271 3.055530 TGGTGAAACAACAGCCAACAATT 60.056 39.130 0.00 0.00 39.98 2.32
3714 6272 2.499289 TGGTGAAACAACAGCCAACAAT 59.501 40.909 0.00 0.00 39.98 2.71
3715 6273 1.895798 TGGTGAAACAACAGCCAACAA 59.104 42.857 0.00 0.00 39.98 2.83
3716 6274 1.476085 CTGGTGAAACAACAGCCAACA 59.524 47.619 3.89 0.00 42.40 3.33
3717 6275 2.208326 CTGGTGAAACAACAGCCAAC 57.792 50.000 3.89 0.00 42.40 3.77
3723 6281 1.483004 TCTCCGACTGGTGAAACAACA 59.517 47.619 0.00 0.00 39.98 3.33
3724 6282 2.234300 TCTCCGACTGGTGAAACAAC 57.766 50.000 0.00 0.00 39.98 3.32
3725 6283 3.138304 CAATCTCCGACTGGTGAAACAA 58.862 45.455 0.00 0.00 40.90 2.83
3726 6284 2.104111 ACAATCTCCGACTGGTGAAACA 59.896 45.455 0.00 0.00 40.90 2.83
3727 6285 2.480419 CACAATCTCCGACTGGTGAAAC 59.520 50.000 0.00 0.00 40.90 2.78
3728 6286 2.367241 TCACAATCTCCGACTGGTGAAA 59.633 45.455 0.00 0.00 40.90 2.69
3729 6287 1.967779 TCACAATCTCCGACTGGTGAA 59.032 47.619 0.00 0.00 40.90 3.18
3730 6288 1.627864 TCACAATCTCCGACTGGTGA 58.372 50.000 0.00 0.00 41.71 4.02
3731 6289 2.289072 ACTTCACAATCTCCGACTGGTG 60.289 50.000 0.00 0.00 36.30 4.17
3732 6290 1.971357 ACTTCACAATCTCCGACTGGT 59.029 47.619 0.00 0.00 36.30 4.00
3733 6291 2.341257 CACTTCACAATCTCCGACTGG 58.659 52.381 0.00 0.00 0.00 4.00
3734 6292 2.341257 CCACTTCACAATCTCCGACTG 58.659 52.381 0.00 0.00 0.00 3.51
3735 6293 1.276421 CCCACTTCACAATCTCCGACT 59.724 52.381 0.00 0.00 0.00 4.18
3736 6294 1.275291 TCCCACTTCACAATCTCCGAC 59.725 52.381 0.00 0.00 0.00 4.79
3737 6295 1.550524 CTCCCACTTCACAATCTCCGA 59.449 52.381 0.00 0.00 0.00 4.55
3738 6296 2.009042 GCTCCCACTTCACAATCTCCG 61.009 57.143 0.00 0.00 0.00 4.63
3739 6297 1.680249 GGCTCCCACTTCACAATCTCC 60.680 57.143 0.00 0.00 0.00 3.71
3740 6298 1.003580 TGGCTCCCACTTCACAATCTC 59.996 52.381 0.00 0.00 0.00 2.75
3741 6299 1.067295 TGGCTCCCACTTCACAATCT 58.933 50.000 0.00 0.00 0.00 2.40
3742 6300 3.650647 TGGCTCCCACTTCACAATC 57.349 52.632 0.00 0.00 0.00 2.67
3752 6310 1.228552 GCCTTCTTTGTGGCTCCCA 60.229 57.895 0.00 0.00 45.26 4.37
3753 6311 3.686760 GCCTTCTTTGTGGCTCCC 58.313 61.111 0.00 0.00 45.26 4.30
3758 6316 1.614903 TCTTGCATGCCTTCTTTGTGG 59.385 47.619 16.68 0.00 0.00 4.17
3759 6317 3.374220 TTCTTGCATGCCTTCTTTGTG 57.626 42.857 16.68 0.00 0.00 3.33
3760 6318 4.312443 CAATTCTTGCATGCCTTCTTTGT 58.688 39.130 16.68 0.00 0.00 2.83
3761 6319 4.921470 CAATTCTTGCATGCCTTCTTTG 57.079 40.909 16.68 9.99 0.00 2.77
3774 6332 2.034939 TCTGCCACAACTGCAATTCTTG 59.965 45.455 0.00 0.00 38.46 3.02
3775 6333 2.295349 CTCTGCCACAACTGCAATTCTT 59.705 45.455 0.00 0.00 38.46 2.52
3776 6334 1.884579 CTCTGCCACAACTGCAATTCT 59.115 47.619 0.00 0.00 38.46 2.40
3777 6335 1.668047 GCTCTGCCACAACTGCAATTC 60.668 52.381 0.00 0.00 38.46 2.17
3778 6336 0.316204 GCTCTGCCACAACTGCAATT 59.684 50.000 0.00 0.00 38.46 2.32
3779 6337 0.538977 AGCTCTGCCACAACTGCAAT 60.539 50.000 0.00 0.00 38.46 3.56
3780 6338 1.152902 AGCTCTGCCACAACTGCAA 60.153 52.632 0.00 0.00 38.46 4.08
3781 6339 1.895231 CAGCTCTGCCACAACTGCA 60.895 57.895 0.00 0.00 37.17 4.41
3782 6340 1.575576 CTCAGCTCTGCCACAACTGC 61.576 60.000 0.00 0.00 0.00 4.40
3783 6341 0.954449 CCTCAGCTCTGCCACAACTG 60.954 60.000 0.00 0.00 0.00 3.16
3784 6342 1.374190 CCTCAGCTCTGCCACAACT 59.626 57.895 0.00 0.00 0.00 3.16
3785 6343 2.331132 GCCTCAGCTCTGCCACAAC 61.331 63.158 0.00 0.00 35.50 3.32
3786 6344 2.033141 GCCTCAGCTCTGCCACAA 59.967 61.111 0.00 0.00 35.50 3.33
3867 6425 4.365899 TGTATGTCTACTTACACTGCCG 57.634 45.455 5.10 0.00 33.37 5.69
3919 6494 0.598562 TCAGTCGGTGACTTGAGAGC 59.401 55.000 0.00 0.00 41.37 4.09
3924 6499 8.135529 TGTAAGATATAATCAGTCGGTGACTTG 58.864 37.037 0.00 0.00 41.37 3.16
4015 6590 4.335647 CGGTGCCAGGCCTCTGTT 62.336 66.667 9.64 0.00 39.31 3.16
4074 6649 8.358148 TGAGAACAGTGAACCTAGTTAAGTTAG 58.642 37.037 0.00 0.00 0.00 2.34
4105 6680 9.760077 TCTCTTCGTGAATCTAGTTAAGTTTTT 57.240 29.630 0.00 0.00 0.00 1.94
4106 6681 9.413048 CTCTCTTCGTGAATCTAGTTAAGTTTT 57.587 33.333 0.00 0.00 0.00 2.43
4107 6682 7.542824 GCTCTCTTCGTGAATCTAGTTAAGTTT 59.457 37.037 0.00 0.00 0.00 2.66
4108 6683 7.030768 GCTCTCTTCGTGAATCTAGTTAAGTT 58.969 38.462 0.00 0.00 0.00 2.66
4109 6684 6.376018 AGCTCTCTTCGTGAATCTAGTTAAGT 59.624 38.462 0.00 0.00 0.00 2.24
4110 6685 6.791303 AGCTCTCTTCGTGAATCTAGTTAAG 58.209 40.000 0.00 0.00 0.00 1.85
4111 6686 6.761099 AGCTCTCTTCGTGAATCTAGTTAA 57.239 37.500 0.00 0.00 0.00 2.01
4112 6687 6.761099 AAGCTCTCTTCGTGAATCTAGTTA 57.239 37.500 0.00 0.00 0.00 2.24
4113 6688 5.652994 AAGCTCTCTTCGTGAATCTAGTT 57.347 39.130 0.00 0.00 0.00 2.24
4114 6689 5.406649 CAAAGCTCTCTTCGTGAATCTAGT 58.593 41.667 0.00 0.00 0.00 2.57
4115 6690 4.803088 CCAAAGCTCTCTTCGTGAATCTAG 59.197 45.833 0.00 0.00 0.00 2.43
4116 6691 4.382040 CCCAAAGCTCTCTTCGTGAATCTA 60.382 45.833 0.00 0.00 0.00 1.98
4117 6692 3.594134 CCAAAGCTCTCTTCGTGAATCT 58.406 45.455 0.00 0.00 0.00 2.40
4118 6693 2.675348 CCCAAAGCTCTCTTCGTGAATC 59.325 50.000 0.00 0.00 0.00 2.52
4130 6705 1.106285 CAAGCCATACCCCAAAGCTC 58.894 55.000 0.00 0.00 32.19 4.09
4145 6720 9.962783 ATATTATTCATCAAAAGAAGCTCAAGC 57.037 29.630 0.00 0.00 42.49 4.01
4167 6742 8.868522 TCAAGAAATGAAGGAGTCAACATATT 57.131 30.769 0.00 0.00 40.50 1.28
4173 6748 5.707298 GGACATCAAGAAATGAAGGAGTCAA 59.293 40.000 0.00 0.00 42.54 3.18
4182 6757 5.014123 AGGTAACCTGGACATCAAGAAATGA 59.986 40.000 0.00 0.00 35.72 2.57
4183 6758 5.256474 AGGTAACCTGGACATCAAGAAATG 58.744 41.667 0.00 0.00 29.57 2.32
4184 6759 5.520748 AGGTAACCTGGACATCAAGAAAT 57.479 39.130 0.00 0.00 29.57 2.17
4191 6766 2.677037 CGGACAAGGTAACCTGGACATC 60.677 54.545 0.00 0.00 32.13 3.06
4194 6769 0.971386 TCGGACAAGGTAACCTGGAC 59.029 55.000 0.00 0.00 32.13 4.02
4202 6777 2.322658 AGGAAGTTGTCGGACAAGGTA 58.677 47.619 22.99 0.00 39.00 3.08
4225 6800 1.293963 CCGCCATCATATGTCTGCCG 61.294 60.000 1.90 3.83 0.00 5.69
4228 6803 2.930023 GCTCTCCGCCATCATATGTCTG 60.930 54.545 1.90 2.14 0.00 3.51
4229 6804 1.274728 GCTCTCCGCCATCATATGTCT 59.725 52.381 1.90 0.00 0.00 3.41
4252 6830 4.149511 TGAACGAGGCATTTCATATCCA 57.850 40.909 0.00 0.00 0.00 3.41
4257 6835 5.138125 ACAAATTGAACGAGGCATTTCAT 57.862 34.783 0.00 0.00 31.87 2.57
4258 6836 4.582701 ACAAATTGAACGAGGCATTTCA 57.417 36.364 0.00 0.00 0.00 2.69
4265 6843 3.242936 ACGAACCAACAAATTGAACGAGG 60.243 43.478 0.00 0.00 38.15 4.63
4268 6846 5.503498 TCTAACGAACCAACAAATTGAACG 58.497 37.500 0.00 0.00 38.15 3.95
4274 6852 8.630037 AGATTCTTTTCTAACGAACCAACAAAT 58.370 29.630 0.00 0.00 0.00 2.32
4294 6872 6.348540 GCTTCACCATGAAAAACGTAGATTCT 60.349 38.462 0.00 0.00 35.73 2.40
4315 6893 2.100631 CCACCGTCGTCCATGCTTC 61.101 63.158 0.00 0.00 0.00 3.86
4328 6906 2.875933 TCTTCTTTTGCTGTTACCACCG 59.124 45.455 0.00 0.00 0.00 4.94
4335 6913 3.667960 CGCGCTTATCTTCTTTTGCTGTT 60.668 43.478 5.56 0.00 0.00 3.16
4364 6942 1.347320 GCTAACACGAGCTACCACAC 58.653 55.000 0.00 0.00 39.50 3.82
4367 6945 0.530744 CAGGCTAACACGAGCTACCA 59.469 55.000 0.00 0.00 42.43 3.25
4375 6953 2.380410 GGCACGACAGGCTAACACG 61.380 63.158 0.00 0.00 0.00 4.49
4386 6964 2.740055 CTGACTGCAGGGCACGAC 60.740 66.667 19.93 1.04 38.51 4.34
4430 7008 1.600663 CCCAAATACAAACGCACGCAA 60.601 47.619 0.00 0.00 0.00 4.85
4433 7011 1.723384 CGTCCCAAATACAAACGCACG 60.723 52.381 0.00 0.00 0.00 5.34
4442 7021 6.759827 ACATGTACAGTATTCGTCCCAAATAC 59.240 38.462 0.00 0.00 39.04 1.89
4455 7034 6.162079 GCAGCATATCTGACATGTACAGTAT 58.838 40.000 18.61 14.19 45.72 2.12
4460 7039 5.467735 TCATTGCAGCATATCTGACATGTAC 59.532 40.000 0.00 0.00 45.72 2.90
4470 7049 4.478843 AACATCGTCATTGCAGCATATC 57.521 40.909 0.00 0.00 0.00 1.63
4471 7050 4.906065 AAACATCGTCATTGCAGCATAT 57.094 36.364 0.00 0.00 0.00 1.78
4493 7072 7.283807 TGCACGTTCAAGATTACTAGTATAGGA 59.716 37.037 2.79 0.00 44.97 2.94
4495 7074 8.851960 TTGCACGTTCAAGATTACTAGTATAG 57.148 34.615 2.79 0.00 46.50 1.31
4512 7091 0.041312 GAGAACACGCATTGCACGTT 60.041 50.000 9.69 10.61 42.96 3.99
4515 7094 3.077339 GTGAGAACACGCATTGCAC 57.923 52.632 9.69 0.00 37.28 4.57
4524 7103 7.755822 ACTTATCTTTGTCGATAGTGAGAACAC 59.244 37.037 0.00 0.00 46.24 3.32
4525 7104 7.827701 ACTTATCTTTGTCGATAGTGAGAACA 58.172 34.615 0.00 0.00 37.40 3.18
4526 7105 8.690680 AACTTATCTTTGTCGATAGTGAGAAC 57.309 34.615 0.00 0.00 37.40 3.01
4527 7106 8.520351 TGAACTTATCTTTGTCGATAGTGAGAA 58.480 33.333 0.00 0.00 37.40 2.87
4528 7107 8.051901 TGAACTTATCTTTGTCGATAGTGAGA 57.948 34.615 0.00 0.00 37.40 3.27
4529 7108 8.689251 TTGAACTTATCTTTGTCGATAGTGAG 57.311 34.615 0.00 0.00 37.40 3.51
4535 7114 8.821894 GCTTCTATTGAACTTATCTTTGTCGAT 58.178 33.333 0.00 0.00 0.00 3.59
4536 7115 7.817478 TGCTTCTATTGAACTTATCTTTGTCGA 59.183 33.333 0.00 0.00 0.00 4.20
4537 7116 7.963981 TGCTTCTATTGAACTTATCTTTGTCG 58.036 34.615 0.00 0.00 0.00 4.35
4567 7146 9.939802 ACGTAACCTCTCTTTTAATAGAATTGT 57.060 29.630 0.00 0.00 0.00 2.71
4612 7192 4.141181 ACTCATATTTGGGGCATGAGCTTA 60.141 41.667 10.01 0.00 46.27 3.09
4624 7204 5.757320 GGTGATCTCACTGACTCATATTTGG 59.243 44.000 9.98 0.00 45.73 3.28
4707 7287 7.636150 AGCACTCACAGCTTAATTTATTCAT 57.364 32.000 0.00 0.00 39.87 2.57
4721 7301 5.698089 TGATAACTCTGAAAAGCACTCACAG 59.302 40.000 0.00 0.00 0.00 3.66
4764 7344 5.012239 TCTATTTCCTCACAAGCTGCAATT 58.988 37.500 1.02 0.00 0.00 2.32
4769 7349 5.947228 TGTTTCTATTTCCTCACAAGCTG 57.053 39.130 0.00 0.00 0.00 4.24
4770 7350 6.515696 GCTTTGTTTCTATTTCCTCACAAGCT 60.516 38.462 0.00 0.00 0.00 3.74
4772 7352 6.738114 TGCTTTGTTTCTATTTCCTCACAAG 58.262 36.000 0.00 0.00 0.00 3.16
4784 7364 7.272978 AGTGACTAAACTCTGCTTTGTTTCTA 58.727 34.615 5.17 0.00 37.53 2.10
4785 7365 6.116126 AGTGACTAAACTCTGCTTTGTTTCT 58.884 36.000 5.17 0.00 37.53 2.52
4800 7380 5.995282 CCCATGTACAACTCAAGTGACTAAA 59.005 40.000 0.00 0.00 0.00 1.85
4813 7393 1.818060 TCTGCAATGCCCATGTACAAC 59.182 47.619 1.53 0.00 0.00 3.32
4814 7394 1.818060 GTCTGCAATGCCCATGTACAA 59.182 47.619 1.53 0.00 0.00 2.41
4815 7395 1.462616 GTCTGCAATGCCCATGTACA 58.537 50.000 1.53 0.00 0.00 2.90
4816 7396 0.740737 GGTCTGCAATGCCCATGTAC 59.259 55.000 1.53 0.00 0.00 2.90
4817 7397 0.330941 TGGTCTGCAATGCCCATGTA 59.669 50.000 1.53 0.00 0.00 2.29
4818 7398 0.542467 TTGGTCTGCAATGCCCATGT 60.542 50.000 1.53 0.00 0.00 3.21
4819 7399 0.174845 CTTGGTCTGCAATGCCCATG 59.825 55.000 1.53 1.70 0.00 3.66
4820 7400 0.251922 ACTTGGTCTGCAATGCCCAT 60.252 50.000 1.53 0.00 0.00 4.00
4821 7401 0.469705 AACTTGGTCTGCAATGCCCA 60.470 50.000 1.53 0.00 0.00 5.36
4822 7402 0.681175 AAACTTGGTCTGCAATGCCC 59.319 50.000 1.53 0.00 0.00 5.36
4823 7403 1.666888 CGAAACTTGGTCTGCAATGCC 60.667 52.381 1.53 0.00 0.00 4.40
4824 7404 1.689959 CGAAACTTGGTCTGCAATGC 58.310 50.000 0.00 0.00 0.00 3.56
4825 7405 1.267806 AGCGAAACTTGGTCTGCAATG 59.732 47.619 0.00 0.00 0.00 2.82
4826 7406 1.267806 CAGCGAAACTTGGTCTGCAAT 59.732 47.619 0.00 0.00 0.00 3.56
4827 7407 0.662619 CAGCGAAACTTGGTCTGCAA 59.337 50.000 0.00 0.00 0.00 4.08
4828 7408 0.179059 TCAGCGAAACTTGGTCTGCA 60.179 50.000 0.00 0.00 0.00 4.41
4829 7409 0.944386 TTCAGCGAAACTTGGTCTGC 59.056 50.000 0.00 0.00 0.00 4.26
4830 7410 1.264288 GGTTCAGCGAAACTTGGTCTG 59.736 52.381 4.59 0.00 0.00 3.51
4831 7411 1.594331 GGTTCAGCGAAACTTGGTCT 58.406 50.000 4.59 0.00 0.00 3.85
4832 7412 0.234884 CGGTTCAGCGAAACTTGGTC 59.765 55.000 5.13 0.00 0.00 4.02
4833 7413 1.164041 CCGGTTCAGCGAAACTTGGT 61.164 55.000 0.00 0.00 0.00 3.67
4834 7414 1.574428 CCGGTTCAGCGAAACTTGG 59.426 57.895 0.00 4.12 0.00 3.61
4835 7415 1.082104 GCCGGTTCAGCGAAACTTG 60.082 57.895 1.90 0.00 0.00 3.16
4836 7416 1.525077 TGCCGGTTCAGCGAAACTT 60.525 52.632 1.90 0.00 0.00 2.66
4837 7417 2.110213 TGCCGGTTCAGCGAAACT 59.890 55.556 1.90 0.00 0.00 2.66
4838 7418 2.251371 GTGCCGGTTCAGCGAAAC 59.749 61.111 1.90 0.00 0.00 2.78
4839 7419 2.975799 GGTGCCGGTTCAGCGAAA 60.976 61.111 1.90 0.00 0.00 3.46
4840 7420 4.243008 TGGTGCCGGTTCAGCGAA 62.243 61.111 1.90 0.00 37.28 4.70
4841 7421 4.680237 CTGGTGCCGGTTCAGCGA 62.680 66.667 1.90 0.00 37.28 4.93
4843 7423 4.329545 TCCTGGTGCCGGTTCAGC 62.330 66.667 1.90 3.49 35.22 4.26
4844 7424 1.903877 ATCTCCTGGTGCCGGTTCAG 61.904 60.000 1.90 8.54 0.00 3.02
4847 7427 1.488705 TTGATCTCCTGGTGCCGGTT 61.489 55.000 1.90 0.00 0.00 4.44
4851 7431 1.457346 CACTTTGATCTCCTGGTGCC 58.543 55.000 0.00 0.00 0.00 5.01
4861 7441 5.066505 CCCAGTAATACTTGCCACTTTGATC 59.933 44.000 0.00 0.00 0.00 2.92
4862 7442 4.949856 CCCAGTAATACTTGCCACTTTGAT 59.050 41.667 0.00 0.00 0.00 2.57
4863 7443 4.042311 TCCCAGTAATACTTGCCACTTTGA 59.958 41.667 0.00 0.00 0.00 2.69
4864 7444 4.331968 TCCCAGTAATACTTGCCACTTTG 58.668 43.478 0.00 0.00 0.00 2.77
4866 7446 3.054361 CCTCCCAGTAATACTTGCCACTT 60.054 47.826 0.00 0.00 0.00 3.16
4867 7447 2.505819 CCTCCCAGTAATACTTGCCACT 59.494 50.000 0.00 0.00 0.00 4.00
4868 7448 2.919228 CCTCCCAGTAATACTTGCCAC 58.081 52.381 0.00 0.00 0.00 5.01
4869 7449 1.211949 GCCTCCCAGTAATACTTGCCA 59.788 52.381 0.00 0.00 0.00 4.92
4870 7450 1.211949 TGCCTCCCAGTAATACTTGCC 59.788 52.381 0.00 0.00 0.00 4.52
4877 7457 3.591977 ACCTTTTAGTGCCTCCCAGTAAT 59.408 43.478 0.00 0.00 38.71 1.89
4881 7461 1.073923 ACACCTTTTAGTGCCTCCCAG 59.926 52.381 0.00 0.00 41.67 4.45
4884 7464 3.798889 GCAAAACACCTTTTAGTGCCTCC 60.799 47.826 0.00 0.00 41.67 4.30
4903 7483 5.788450 TGTTTCTTTTCCTTCAAACTGCAA 58.212 33.333 0.00 0.00 31.29 4.08
4905 7485 6.673076 GCTTTGTTTCTTTTCCTTCAAACTGC 60.673 38.462 0.00 0.00 31.29 4.40
4911 7491 5.418840 ACTCTGCTTTGTTTCTTTTCCTTCA 59.581 36.000 0.00 0.00 0.00 3.02
4920 7500 6.599638 AGTTAACTGAACTCTGCTTTGTTTCT 59.400 34.615 7.48 0.00 45.81 2.52
4968 7548 4.440112 GGCACTTGTTTAACACTTCTTGCT 60.440 41.667 0.00 0.00 0.00 3.91
4975 7555 4.207165 ACTCATGGCACTTGTTTAACACT 58.793 39.130 0.00 0.00 0.00 3.55
4985 7565 2.629617 CCCTCAAAAACTCATGGCACTT 59.370 45.455 0.00 0.00 0.00 3.16
4988 7568 2.158475 AGTCCCTCAAAAACTCATGGCA 60.158 45.455 0.00 0.00 0.00 4.92
5022 7663 5.757320 CCGAGATCAGTTGATTTGCTAATCT 59.243 40.000 19.31 0.81 40.68 2.40
5040 7681 7.735917 TCTGTTGGTTATATGAAATCCGAGAT 58.264 34.615 0.00 0.00 0.00 2.75
5057 7698 5.189145 ACGAGGGAGTAATATTTCTGTTGGT 59.811 40.000 0.00 0.00 0.00 3.67
5058 7699 5.671493 ACGAGGGAGTAATATTTCTGTTGG 58.329 41.667 0.00 0.00 0.00 3.77
5059 7700 6.816640 TGAACGAGGGAGTAATATTTCTGTTG 59.183 38.462 0.00 0.00 0.00 3.33
5073 7863 4.377897 ACTTACAAAAGTGAACGAGGGAG 58.622 43.478 0.00 0.00 44.40 4.30
5075 7865 4.334481 ACAACTTACAAAAGTGAACGAGGG 59.666 41.667 0.00 0.00 45.37 4.30
5077 7867 7.018826 TGAAACAACTTACAAAAGTGAACGAG 58.981 34.615 0.00 0.00 45.37 4.18
5079 7869 7.007099 GTCTGAAACAACTTACAAAAGTGAACG 59.993 37.037 0.00 0.00 45.37 3.95
5080 7870 7.806014 TGTCTGAAACAACTTACAAAAGTGAAC 59.194 33.333 0.00 0.00 45.37 3.18
5081 7871 7.877003 TGTCTGAAACAACTTACAAAAGTGAA 58.123 30.769 0.00 0.00 45.37 3.18
5082 7872 7.441890 TGTCTGAAACAACTTACAAAAGTGA 57.558 32.000 0.00 0.00 45.37 3.41
5095 7885 6.096141 TGCCTATTTTGAGTTGTCTGAAACAA 59.904 34.615 5.82 0.00 45.60 2.83
5096 7886 5.592282 TGCCTATTTTGAGTTGTCTGAAACA 59.408 36.000 5.82 0.00 35.59 2.83
5097 7887 6.072112 TGCCTATTTTGAGTTGTCTGAAAC 57.928 37.500 0.00 0.00 0.00 2.78
5098 7888 5.827797 ACTGCCTATTTTGAGTTGTCTGAAA 59.172 36.000 0.00 0.00 0.00 2.69
5099 7889 5.376625 ACTGCCTATTTTGAGTTGTCTGAA 58.623 37.500 0.00 0.00 0.00 3.02
5100 7890 4.973168 ACTGCCTATTTTGAGTTGTCTGA 58.027 39.130 0.00 0.00 0.00 3.27
5101 7891 5.695851 AACTGCCTATTTTGAGTTGTCTG 57.304 39.130 0.00 0.00 0.00 3.51
5102 7892 6.507023 CAAAACTGCCTATTTTGAGTTGTCT 58.493 36.000 10.18 0.00 45.75 3.41
5103 7893 5.175673 GCAAAACTGCCTATTTTGAGTTGTC 59.824 40.000 16.86 0.44 45.75 3.18
5104 7894 5.049828 GCAAAACTGCCTATTTTGAGTTGT 58.950 37.500 16.86 0.00 45.75 3.32
5105 7895 5.049167 TGCAAAACTGCCTATTTTGAGTTG 58.951 37.500 16.86 0.00 45.75 3.16
5106 7896 5.049828 GTGCAAAACTGCCTATTTTGAGTT 58.950 37.500 16.86 0.00 45.75 3.01
5107 7897 4.099266 TGTGCAAAACTGCCTATTTTGAGT 59.901 37.500 16.86 0.00 45.75 3.41
5108 7898 4.619973 TGTGCAAAACTGCCTATTTTGAG 58.380 39.130 16.86 0.00 45.75 3.02
5109 7899 4.662468 TGTGCAAAACTGCCTATTTTGA 57.338 36.364 16.86 4.36 45.75 2.69
5110 7900 5.236911 ACAATGTGCAAAACTGCCTATTTTG 59.763 36.000 11.01 11.01 45.68 2.44
5111 7901 5.367302 ACAATGTGCAAAACTGCCTATTTT 58.633 33.333 0.00 0.00 0.00 1.82
5112 7902 4.959723 ACAATGTGCAAAACTGCCTATTT 58.040 34.783 0.00 0.00 0.00 1.40
5113 7903 4.281688 AGACAATGTGCAAAACTGCCTATT 59.718 37.500 0.00 0.00 0.00 1.73
5114 7904 3.828451 AGACAATGTGCAAAACTGCCTAT 59.172 39.130 0.00 0.00 0.00 2.57
5115 7905 3.004629 CAGACAATGTGCAAAACTGCCTA 59.995 43.478 0.00 0.00 0.00 3.93
5116 7906 2.034124 AGACAATGTGCAAAACTGCCT 58.966 42.857 0.00 0.00 0.00 4.75
5117 7907 2.129607 CAGACAATGTGCAAAACTGCC 58.870 47.619 0.00 0.00 0.00 4.85
5118 7908 3.082698 TCAGACAATGTGCAAAACTGC 57.917 42.857 0.00 0.00 0.00 4.40
5119 7909 5.521010 ACATTTCAGACAATGTGCAAAACTG 59.479 36.000 0.00 0.00 44.19 3.16
5120 7910 5.663456 ACATTTCAGACAATGTGCAAAACT 58.337 33.333 0.00 0.00 44.19 2.66
5121 7911 5.750067 AGACATTTCAGACAATGTGCAAAAC 59.250 36.000 12.82 2.36 45.55 2.43
5122 7912 5.904941 AGACATTTCAGACAATGTGCAAAA 58.095 33.333 12.82 0.00 45.55 2.44
5123 7913 5.518848 AGACATTTCAGACAATGTGCAAA 57.481 34.783 12.82 0.00 45.55 3.68
5124 7914 5.067544 TGAAGACATTTCAGACAATGTGCAA 59.932 36.000 12.82 0.00 45.55 4.08
5125 7915 4.579753 TGAAGACATTTCAGACAATGTGCA 59.420 37.500 12.82 0.00 45.55 4.57
5126 7916 5.112220 TGAAGACATTTCAGACAATGTGC 57.888 39.130 12.82 7.29 45.55 4.57
5127 7917 6.147581 CCTTGAAGACATTTCAGACAATGTG 58.852 40.000 12.82 2.31 45.55 3.21
5129 7919 5.159209 GCCTTGAAGACATTTCAGACAATG 58.841 41.667 0.00 0.00 39.67 2.82
5130 7920 4.219288 GGCCTTGAAGACATTTCAGACAAT 59.781 41.667 0.00 0.00 0.00 2.71
5131 7921 3.569701 GGCCTTGAAGACATTTCAGACAA 59.430 43.478 0.00 0.00 0.00 3.18
5132 7922 3.149196 GGCCTTGAAGACATTTCAGACA 58.851 45.455 0.00 0.00 0.00 3.41
5133 7923 3.416156 AGGCCTTGAAGACATTTCAGAC 58.584 45.455 0.00 0.00 0.00 3.51
5134 7924 3.795688 AGGCCTTGAAGACATTTCAGA 57.204 42.857 0.00 0.00 0.00 3.27
5135 7925 7.630242 TTATAAGGCCTTGAAGACATTTCAG 57.370 36.000 28.77 0.00 0.00 3.02
5136 7926 8.415950 TTTTATAAGGCCTTGAAGACATTTCA 57.584 30.769 28.77 3.15 0.00 2.69
5137 7927 8.523658 ACTTTTATAAGGCCTTGAAGACATTTC 58.476 33.333 28.77 0.00 35.61 2.17
5138 7928 8.306761 CACTTTTATAAGGCCTTGAAGACATTT 58.693 33.333 28.77 0.00 35.61 2.32
5139 7929 7.669722 TCACTTTTATAAGGCCTTGAAGACATT 59.330 33.333 28.77 0.00 35.61 2.71
5140 7930 7.175104 TCACTTTTATAAGGCCTTGAAGACAT 58.825 34.615 28.77 14.50 35.61 3.06
5141 7931 6.539173 TCACTTTTATAAGGCCTTGAAGACA 58.461 36.000 28.77 7.10 35.61 3.41
5142 7932 7.040686 TGTTCACTTTTATAAGGCCTTGAAGAC 60.041 37.037 28.77 17.56 35.61 3.01
5143 7933 7.001674 TGTTCACTTTTATAAGGCCTTGAAGA 58.998 34.615 28.77 15.87 35.61 2.87
5144 7934 7.174946 TCTGTTCACTTTTATAAGGCCTTGAAG 59.825 37.037 28.77 24.09 35.61 3.02
5145 7935 7.001674 TCTGTTCACTTTTATAAGGCCTTGAA 58.998 34.615 28.77 17.44 35.61 2.69
5146 7936 6.539173 TCTGTTCACTTTTATAAGGCCTTGA 58.461 36.000 28.77 11.98 35.61 3.02
5147 7937 6.127897 CCTCTGTTCACTTTTATAAGGCCTTG 60.128 42.308 28.77 12.48 35.61 3.61
5148 7938 5.946377 CCTCTGTTCACTTTTATAAGGCCTT 59.054 40.000 24.18 24.18 35.61 4.35
5149 7939 5.250774 TCCTCTGTTCACTTTTATAAGGCCT 59.749 40.000 0.00 0.00 35.61 5.19
5150 7940 5.497474 TCCTCTGTTCACTTTTATAAGGCC 58.503 41.667 0.00 0.00 35.61 5.19
5151 7941 6.655425 ACTTCCTCTGTTCACTTTTATAAGGC 59.345 38.462 0.00 0.00 35.61 4.35
5152 7942 9.892130 ATACTTCCTCTGTTCACTTTTATAAGG 57.108 33.333 0.00 0.00 35.61 2.69
5180 7970 9.322773 CATGATCAGTTGAGTGAAGTTATATGT 57.677 33.333 0.09 0.00 0.00 2.29
5181 7971 9.322773 ACATGATCAGTTGAGTGAAGTTATATG 57.677 33.333 0.00 0.00 0.00 1.78


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.