Multiple sequence alignment - TraesCS5D01G269100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G269100 chr5D 100.000 4070 0 0 1 4070 372049371 372045302 0.000000e+00 7516
1 TraesCS5D01G269100 chr5A 92.060 3388 210 21 717 4070 475373166 475376528 0.000000e+00 4711
2 TraesCS5D01G269100 chr5A 92.347 2901 214 6 917 3814 475327423 475324528 0.000000e+00 4120
3 TraesCS5D01G269100 chr5A 91.781 219 13 5 672 888 475327637 475327422 2.380000e-77 300
4 TraesCS5D01G269100 chr5A 96.825 126 4 0 514 639 475327759 475327634 1.150000e-50 211
5 TraesCS5D01G269100 chr5A 83.884 242 12 9 3813 4034 475324369 475324135 5.330000e-49 206
6 TraesCS5D01G269100 chr5B 92.569 3095 193 15 1000 4067 442382246 442379162 0.000000e+00 4407
7 TraesCS5D01G269100 chr5B 90.820 512 44 2 1286 1797 442391055 442390547 0.000000e+00 682
8 TraesCS5D01G269100 chr5B 93.651 441 24 3 816 1254 442391491 442391053 0.000000e+00 656
9 TraesCS5D01G269100 chr5B 93.662 142 8 1 673 814 442393956 442393816 1.150000e-50 211


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G269100 chr5D 372045302 372049371 4069 True 7516.000000 7516 100.00000 1 4070 1 chr5D.!!$R1 4069
1 TraesCS5D01G269100 chr5A 475373166 475376528 3362 False 4711.000000 4711 92.06000 717 4070 1 chr5A.!!$F1 3353
2 TraesCS5D01G269100 chr5A 475324135 475327759 3624 True 1209.250000 4120 91.20925 514 4034 4 chr5A.!!$R1 3520
3 TraesCS5D01G269100 chr5B 442379162 442382246 3084 True 4407.000000 4407 92.56900 1000 4067 1 chr5B.!!$R1 3067
4 TraesCS5D01G269100 chr5B 442390547 442393956 3409 True 516.333333 682 92.71100 673 1797 3 chr5B.!!$R2 1124

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
653 654 0.029267 AATCCCCTCCCTCATGCTCT 60.029 55.0 0.00 0.0 0.0 4.09 F
1262 3620 0.329596 AACATCTTGGCCAGGGAGAC 59.670 55.0 15.86 0.0 0.0 3.36 F
1491 3849 0.318441 CAAGAAGACTGACGCTCCCA 59.682 55.0 0.00 0.0 0.0 4.37 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1491 3849 0.389426 CGACGTCGTCCCCAAAATCT 60.389 55.0 29.08 0.0 34.11 2.40 R
2110 4468 0.457443 GCAAGAGGCAAGCCATTACC 59.543 55.0 14.40 0.0 43.97 2.85 R
3269 5627 0.324943 GTCAGCCAGCTCCCAAGTAA 59.675 55.0 0.00 0.0 0.00 2.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 3.741476 CGAAGCTGCTTGGGTGCC 61.741 66.667 21.25 2.92 0.00 5.01
36 37 3.376918 GAAGCTGCTTGGGTGCCC 61.377 66.667 21.25 0.00 0.00 5.36
40 41 2.677875 CTGCTTGGGTGCCCCTTC 60.678 66.667 11.10 2.19 45.70 3.46
41 42 4.659172 TGCTTGGGTGCCCCTTCG 62.659 66.667 11.10 2.00 45.70 3.79
42 43 4.660938 GCTTGGGTGCCCCTTCGT 62.661 66.667 11.10 0.00 45.70 3.85
43 44 2.115266 CTTGGGTGCCCCTTCGTT 59.885 61.111 11.10 0.00 45.70 3.85
44 45 1.530655 CTTGGGTGCCCCTTCGTTT 60.531 57.895 11.10 0.00 45.70 3.60
45 46 0.250989 CTTGGGTGCCCCTTCGTTTA 60.251 55.000 11.10 0.00 45.70 2.01
46 47 0.406361 TTGGGTGCCCCTTCGTTTAT 59.594 50.000 11.10 0.00 45.70 1.40
47 48 0.406361 TGGGTGCCCCTTCGTTTATT 59.594 50.000 11.10 0.00 45.70 1.40
48 49 1.203075 TGGGTGCCCCTTCGTTTATTT 60.203 47.619 11.10 0.00 45.70 1.40
49 50 2.041350 TGGGTGCCCCTTCGTTTATTTA 59.959 45.455 11.10 0.00 45.70 1.40
50 51 3.090790 GGGTGCCCCTTCGTTTATTTAA 58.909 45.455 3.16 0.00 41.34 1.52
51 52 3.129813 GGGTGCCCCTTCGTTTATTTAAG 59.870 47.826 3.16 0.00 41.34 1.85
52 53 3.129813 GGTGCCCCTTCGTTTATTTAAGG 59.870 47.826 0.00 0.00 39.63 2.69
53 54 4.011698 GTGCCCCTTCGTTTATTTAAGGA 58.988 43.478 0.00 0.00 42.01 3.36
54 55 4.460034 GTGCCCCTTCGTTTATTTAAGGAA 59.540 41.667 0.00 0.00 42.01 3.36
61 62 6.980051 TTCGTTTATTTAAGGAAGCTCTCC 57.020 37.500 6.79 6.79 45.81 3.71
71 72 3.913107 AGCTCTCCTGCTTGGGTT 58.087 55.556 0.00 0.00 40.93 4.11
72 73 2.158780 AGCTCTCCTGCTTGGGTTT 58.841 52.632 0.00 0.00 40.93 3.27
73 74 0.037447 AGCTCTCCTGCTTGGGTTTC 59.963 55.000 0.00 0.00 40.93 2.78
74 75 0.250901 GCTCTCCTGCTTGGGTTTCA 60.251 55.000 0.00 0.00 36.20 2.69
75 76 1.818642 CTCTCCTGCTTGGGTTTCAG 58.181 55.000 0.00 0.00 36.20 3.02
76 77 1.349026 CTCTCCTGCTTGGGTTTCAGA 59.651 52.381 0.00 0.00 36.20 3.27
77 78 1.349026 TCTCCTGCTTGGGTTTCAGAG 59.651 52.381 0.00 0.00 36.20 3.35
78 79 1.072965 CTCCTGCTTGGGTTTCAGAGT 59.927 52.381 0.00 0.00 36.20 3.24
79 80 1.202806 TCCTGCTTGGGTTTCAGAGTG 60.203 52.381 0.00 0.00 36.20 3.51
80 81 1.477558 CCTGCTTGGGTTTCAGAGTGT 60.478 52.381 0.00 0.00 0.00 3.55
81 82 2.301346 CTGCTTGGGTTTCAGAGTGTT 58.699 47.619 0.00 0.00 0.00 3.32
82 83 2.023673 TGCTTGGGTTTCAGAGTGTTG 58.976 47.619 0.00 0.00 0.00 3.33
83 84 2.024414 GCTTGGGTTTCAGAGTGTTGT 58.976 47.619 0.00 0.00 0.00 3.32
84 85 2.033424 GCTTGGGTTTCAGAGTGTTGTC 59.967 50.000 0.00 0.00 0.00 3.18
85 86 3.545703 CTTGGGTTTCAGAGTGTTGTCT 58.454 45.455 0.00 0.00 0.00 3.41
86 87 2.917933 TGGGTTTCAGAGTGTTGTCTG 58.082 47.619 0.00 0.00 44.71 3.51
87 88 2.238646 TGGGTTTCAGAGTGTTGTCTGT 59.761 45.455 1.03 0.00 43.89 3.41
88 89 3.279434 GGGTTTCAGAGTGTTGTCTGTT 58.721 45.455 1.03 0.00 43.89 3.16
89 90 3.694566 GGGTTTCAGAGTGTTGTCTGTTT 59.305 43.478 1.03 0.00 43.89 2.83
90 91 4.157840 GGGTTTCAGAGTGTTGTCTGTTTT 59.842 41.667 1.03 0.00 43.89 2.43
91 92 5.336451 GGGTTTCAGAGTGTTGTCTGTTTTT 60.336 40.000 1.03 0.00 43.89 1.94
92 93 5.800438 GGTTTCAGAGTGTTGTCTGTTTTTC 59.200 40.000 1.03 0.00 43.89 2.29
93 94 6.349363 GGTTTCAGAGTGTTGTCTGTTTTTCT 60.349 38.462 1.03 0.00 43.89 2.52
94 95 6.817765 TTCAGAGTGTTGTCTGTTTTTCTT 57.182 33.333 1.03 0.00 43.89 2.52
95 96 6.817765 TCAGAGTGTTGTCTGTTTTTCTTT 57.182 33.333 1.03 0.00 43.89 2.52
96 97 7.214467 TCAGAGTGTTGTCTGTTTTTCTTTT 57.786 32.000 1.03 0.00 43.89 2.27
97 98 7.657336 TCAGAGTGTTGTCTGTTTTTCTTTTT 58.343 30.769 1.03 0.00 43.89 1.94
98 99 7.807907 TCAGAGTGTTGTCTGTTTTTCTTTTTC 59.192 33.333 1.03 0.00 43.89 2.29
99 100 7.809806 CAGAGTGTTGTCTGTTTTTCTTTTTCT 59.190 33.333 0.00 0.00 39.39 2.52
100 101 8.360390 AGAGTGTTGTCTGTTTTTCTTTTTCTT 58.640 29.630 0.00 0.00 0.00 2.52
101 102 8.887036 AGTGTTGTCTGTTTTTCTTTTTCTTT 57.113 26.923 0.00 0.00 0.00 2.52
102 103 9.325198 AGTGTTGTCTGTTTTTCTTTTTCTTTT 57.675 25.926 0.00 0.00 0.00 2.27
103 104 9.929722 GTGTTGTCTGTTTTTCTTTTTCTTTTT 57.070 25.926 0.00 0.00 0.00 1.94
124 125 7.630242 TTTTTGAGAATTCAGAGTGTTGTCT 57.370 32.000 8.44 0.00 34.15 3.41
125 126 6.609237 TTTGAGAATTCAGAGTGTTGTCTG 57.391 37.500 8.44 0.00 44.71 3.51
126 127 5.282055 TGAGAATTCAGAGTGTTGTCTGT 57.718 39.130 8.44 0.00 43.89 3.41
127 128 5.674525 TGAGAATTCAGAGTGTTGTCTGTT 58.325 37.500 8.44 0.00 43.89 3.16
128 129 6.115446 TGAGAATTCAGAGTGTTGTCTGTTT 58.885 36.000 8.44 0.00 43.89 2.83
129 130 6.599244 TGAGAATTCAGAGTGTTGTCTGTTTT 59.401 34.615 8.44 0.00 43.89 2.43
130 131 7.121168 TGAGAATTCAGAGTGTTGTCTGTTTTT 59.879 33.333 8.44 0.00 43.89 1.94
154 155 9.457436 TTTTAGGGGTAAAGCTAGATTTTACTG 57.543 33.333 11.82 0.00 39.68 2.74
155 156 5.437946 AGGGGTAAAGCTAGATTTTACTGC 58.562 41.667 11.82 5.09 39.68 4.40
156 157 5.191921 AGGGGTAAAGCTAGATTTTACTGCT 59.808 40.000 11.82 0.00 39.68 4.24
157 158 5.527951 GGGGTAAAGCTAGATTTTACTGCTC 59.472 44.000 11.82 2.04 39.68 4.26
158 159 6.113411 GGGTAAAGCTAGATTTTACTGCTCA 58.887 40.000 11.82 0.00 39.68 4.26
159 160 6.598064 GGGTAAAGCTAGATTTTACTGCTCAA 59.402 38.462 11.82 0.00 39.68 3.02
160 161 7.120726 GGGTAAAGCTAGATTTTACTGCTCAAA 59.879 37.037 11.82 0.00 39.68 2.69
161 162 8.512138 GGTAAAGCTAGATTTTACTGCTCAAAA 58.488 33.333 11.82 0.00 39.68 2.44
162 163 9.893305 GTAAAGCTAGATTTTACTGCTCAAAAA 57.107 29.630 11.82 0.00 37.78 1.94
163 164 8.803201 AAAGCTAGATTTTACTGCTCAAAAAC 57.197 30.769 0.00 0.00 33.10 2.43
164 165 6.914259 AGCTAGATTTTACTGCTCAAAAACC 58.086 36.000 0.00 0.00 0.00 3.27
165 166 6.717084 AGCTAGATTTTACTGCTCAAAAACCT 59.283 34.615 0.00 0.00 0.00 3.50
166 167 7.231519 AGCTAGATTTTACTGCTCAAAAACCTT 59.768 33.333 0.00 0.00 0.00 3.50
167 168 7.327032 GCTAGATTTTACTGCTCAAAAACCTTG 59.673 37.037 0.00 0.00 0.00 3.61
168 169 7.346751 AGATTTTACTGCTCAAAAACCTTGA 57.653 32.000 0.00 0.00 0.00 3.02
169 170 7.203218 AGATTTTACTGCTCAAAAACCTTGAC 58.797 34.615 0.00 0.00 0.00 3.18
170 171 5.906113 TTTACTGCTCAAAAACCTTGACA 57.094 34.783 0.00 0.00 0.00 3.58
171 172 5.906113 TTACTGCTCAAAAACCTTGACAA 57.094 34.783 0.00 0.00 0.00 3.18
172 173 4.110036 ACTGCTCAAAAACCTTGACAAC 57.890 40.909 0.00 0.00 0.00 3.32
173 174 3.509575 ACTGCTCAAAAACCTTGACAACA 59.490 39.130 0.00 0.00 0.00 3.33
174 175 3.843999 TGCTCAAAAACCTTGACAACAC 58.156 40.909 0.00 0.00 0.00 3.32
175 176 3.256879 TGCTCAAAAACCTTGACAACACA 59.743 39.130 0.00 0.00 0.00 3.72
176 177 3.859386 GCTCAAAAACCTTGACAACACAG 59.141 43.478 0.00 0.00 0.00 3.66
177 178 4.618227 GCTCAAAAACCTTGACAACACAGT 60.618 41.667 0.00 0.00 0.00 3.55
178 179 4.804108 TCAAAAACCTTGACAACACAGTG 58.196 39.130 0.00 0.00 0.00 3.66
179 180 2.939460 AAACCTTGACAACACAGTGC 57.061 45.000 0.00 0.00 0.00 4.40
180 181 0.732571 AACCTTGACAACACAGTGCG 59.267 50.000 0.00 0.00 0.00 5.34
181 182 0.392461 ACCTTGACAACACAGTGCGT 60.392 50.000 0.00 0.00 0.00 5.24
197 198 4.570663 GTGACCCGCCGGATCGAG 62.571 72.222 5.05 0.00 0.00 4.04
203 204 3.646976 CGCCGGATCGAGCTCGTA 61.647 66.667 33.33 21.14 40.80 3.43
204 205 2.955402 GCCGGATCGAGCTCGTAT 59.045 61.111 33.33 24.51 40.80 3.06
205 206 1.286260 GCCGGATCGAGCTCGTATT 59.714 57.895 33.33 20.25 40.80 1.89
206 207 0.318784 GCCGGATCGAGCTCGTATTT 60.319 55.000 33.33 17.84 40.80 1.40
207 208 1.868519 GCCGGATCGAGCTCGTATTTT 60.869 52.381 33.33 15.47 40.80 1.82
208 209 2.606308 GCCGGATCGAGCTCGTATTTTA 60.606 50.000 33.33 15.50 40.80 1.52
209 210 3.834610 CCGGATCGAGCTCGTATTTTAT 58.165 45.455 33.33 19.60 40.80 1.40
210 211 4.235360 CCGGATCGAGCTCGTATTTTATT 58.765 43.478 33.33 10.84 40.80 1.40
211 212 4.323868 CCGGATCGAGCTCGTATTTTATTC 59.676 45.833 33.33 17.23 40.80 1.75
212 213 5.154932 CGGATCGAGCTCGTATTTTATTCT 58.845 41.667 33.33 8.28 40.80 2.40
213 214 5.629849 CGGATCGAGCTCGTATTTTATTCTT 59.370 40.000 33.33 0.00 40.80 2.52
214 215 6.399039 CGGATCGAGCTCGTATTTTATTCTTG 60.399 42.308 33.33 4.32 40.80 3.02
215 216 6.128795 GGATCGAGCTCGTATTTTATTCTTGG 60.129 42.308 33.33 1.87 40.80 3.61
216 217 4.506654 TCGAGCTCGTATTTTATTCTTGGC 59.493 41.667 33.33 0.00 40.80 4.52
217 218 4.318831 CGAGCTCGTATTTTATTCTTGGCC 60.319 45.833 27.79 0.00 34.11 5.36
218 219 4.781934 AGCTCGTATTTTATTCTTGGCCT 58.218 39.130 3.32 0.00 0.00 5.19
219 220 4.816925 AGCTCGTATTTTATTCTTGGCCTC 59.183 41.667 3.32 0.00 0.00 4.70
220 221 4.574828 GCTCGTATTTTATTCTTGGCCTCA 59.425 41.667 3.32 0.00 0.00 3.86
221 222 5.239525 GCTCGTATTTTATTCTTGGCCTCAT 59.760 40.000 3.32 0.00 0.00 2.90
222 223 6.566753 GCTCGTATTTTATTCTTGGCCTCATC 60.567 42.308 3.32 0.00 0.00 2.92
223 224 5.763204 TCGTATTTTATTCTTGGCCTCATCC 59.237 40.000 3.32 0.00 0.00 3.51
224 225 5.765182 CGTATTTTATTCTTGGCCTCATCCT 59.235 40.000 3.32 0.00 0.00 3.24
225 226 6.073003 CGTATTTTATTCTTGGCCTCATCCTC 60.073 42.308 3.32 0.00 0.00 3.71
226 227 3.864789 TTATTCTTGGCCTCATCCTCC 57.135 47.619 3.32 0.00 0.00 4.30
227 228 0.849417 ATTCTTGGCCTCATCCTCCC 59.151 55.000 3.32 0.00 0.00 4.30
228 229 0.253347 TTCTTGGCCTCATCCTCCCT 60.253 55.000 3.32 0.00 0.00 4.20
229 230 0.692419 TCTTGGCCTCATCCTCCCTC 60.692 60.000 3.32 0.00 0.00 4.30
230 231 1.694169 TTGGCCTCATCCTCCCTCC 60.694 63.158 3.32 0.00 0.00 4.30
231 232 3.237741 GGCCTCATCCTCCCTCCG 61.238 72.222 0.00 0.00 0.00 4.63
232 233 3.237741 GCCTCATCCTCCCTCCGG 61.238 72.222 0.00 0.00 0.00 5.14
233 234 3.237741 CCTCATCCTCCCTCCGGC 61.238 72.222 0.00 0.00 0.00 6.13
234 235 2.444706 CTCATCCTCCCTCCGGCA 60.445 66.667 0.00 0.00 0.00 5.69
235 236 2.040442 TCATCCTCCCTCCGGCAA 59.960 61.111 0.00 0.00 0.00 4.52
236 237 2.037620 CTCATCCTCCCTCCGGCAAG 62.038 65.000 0.00 0.00 0.00 4.01
237 238 2.770048 ATCCTCCCTCCGGCAAGG 60.770 66.667 0.00 0.00 42.97 3.61
263 264 2.465920 GCGTCGACGACAAAGCTG 59.534 61.111 39.74 9.55 43.02 4.24
264 265 2.014554 GCGTCGACGACAAAGCTGA 61.015 57.895 39.74 0.00 43.02 4.26
265 266 1.545614 GCGTCGACGACAAAGCTGAA 61.546 55.000 39.74 0.00 43.02 3.02
266 267 0.431233 CGTCGACGACAAAGCTGAAG 59.569 55.000 33.35 4.23 43.02 3.02
267 268 0.161870 GTCGACGACAAAGCTGAAGC 59.838 55.000 22.66 0.00 35.32 3.86
268 269 0.944311 TCGACGACAAAGCTGAAGCC 60.944 55.000 0.00 0.00 43.38 4.35
269 270 1.221466 CGACGACAAAGCTGAAGCCA 61.221 55.000 0.00 0.00 43.38 4.75
270 271 1.160137 GACGACAAAGCTGAAGCCAT 58.840 50.000 0.00 0.00 43.38 4.40
271 272 0.877071 ACGACAAAGCTGAAGCCATG 59.123 50.000 0.00 1.20 43.38 3.66
272 273 0.169672 CGACAAAGCTGAAGCCATGG 59.830 55.000 7.63 7.63 43.38 3.66
273 274 0.529378 GACAAAGCTGAAGCCATGGG 59.471 55.000 15.13 0.00 43.38 4.00
274 275 0.178953 ACAAAGCTGAAGCCATGGGT 60.179 50.000 11.62 11.62 43.38 4.51
275 276 1.075374 ACAAAGCTGAAGCCATGGGTA 59.925 47.619 18.63 0.77 43.38 3.69
276 277 1.747355 CAAAGCTGAAGCCATGGGTAG 59.253 52.381 18.63 13.17 43.38 3.18
277 278 1.289160 AAGCTGAAGCCATGGGTAGA 58.711 50.000 18.63 5.73 43.38 2.59
278 279 1.289160 AGCTGAAGCCATGGGTAGAA 58.711 50.000 18.63 4.91 43.38 2.10
279 280 1.635487 AGCTGAAGCCATGGGTAGAAA 59.365 47.619 18.63 2.26 43.38 2.52
280 281 2.243221 AGCTGAAGCCATGGGTAGAAAT 59.757 45.455 18.63 0.00 43.38 2.17
281 282 2.360165 GCTGAAGCCATGGGTAGAAATG 59.640 50.000 18.63 5.96 34.31 2.32
282 283 2.360165 CTGAAGCCATGGGTAGAAATGC 59.640 50.000 18.63 0.00 0.00 3.56
283 284 2.291475 TGAAGCCATGGGTAGAAATGCA 60.291 45.455 18.63 4.45 0.00 3.96
284 285 2.062971 AGCCATGGGTAGAAATGCAG 57.937 50.000 16.58 0.00 0.00 4.41
285 286 0.386838 GCCATGGGTAGAAATGCAGC 59.613 55.000 15.13 0.00 0.00 5.25
286 287 0.664761 CCATGGGTAGAAATGCAGCG 59.335 55.000 2.85 0.00 0.00 5.18
287 288 0.029834 CATGGGTAGAAATGCAGCGC 59.970 55.000 0.00 0.00 0.00 5.92
288 289 0.107017 ATGGGTAGAAATGCAGCGCT 60.107 50.000 2.64 2.64 0.00 5.92
289 290 1.026182 TGGGTAGAAATGCAGCGCTG 61.026 55.000 32.83 32.83 0.00 5.18
290 291 0.744414 GGGTAGAAATGCAGCGCTGA 60.744 55.000 40.21 24.64 0.00 4.26
291 292 1.303309 GGTAGAAATGCAGCGCTGAT 58.697 50.000 40.21 25.69 0.00 2.90
292 293 1.262683 GGTAGAAATGCAGCGCTGATC 59.737 52.381 40.21 27.82 0.00 2.92
293 294 1.262683 GTAGAAATGCAGCGCTGATCC 59.737 52.381 40.21 22.95 0.00 3.36
294 295 1.099879 AGAAATGCAGCGCTGATCCC 61.100 55.000 40.21 22.58 0.00 3.85
295 296 2.384391 GAAATGCAGCGCTGATCCCG 62.384 60.000 40.21 14.10 0.00 5.14
320 321 2.741211 GGAACCAACCGACCGAGC 60.741 66.667 0.00 0.00 0.00 5.03
321 322 2.342648 GAACCAACCGACCGAGCT 59.657 61.111 0.00 0.00 0.00 4.09
322 323 1.301479 GAACCAACCGACCGAGCTT 60.301 57.895 0.00 0.00 0.00 3.74
323 324 1.566018 GAACCAACCGACCGAGCTTG 61.566 60.000 0.00 0.00 0.00 4.01
324 325 2.742372 CCAACCGACCGAGCTTGG 60.742 66.667 19.26 19.26 0.00 3.61
325 326 3.423154 CAACCGACCGAGCTTGGC 61.423 66.667 20.81 11.75 0.00 4.52
326 327 4.699522 AACCGACCGAGCTTGGCC 62.700 66.667 20.81 8.28 0.00 5.36
328 329 4.394712 CCGACCGAGCTTGGCCTT 62.395 66.667 20.81 0.00 0.00 4.35
329 330 3.121030 CGACCGAGCTTGGCCTTG 61.121 66.667 20.81 1.43 0.00 3.61
330 331 2.747855 GACCGAGCTTGGCCTTGG 60.748 66.667 20.81 0.00 41.41 3.61
331 332 4.351054 ACCGAGCTTGGCCTTGGG 62.351 66.667 20.81 0.27 40.18 4.12
332 333 4.351054 CCGAGCTTGGCCTTGGGT 62.351 66.667 7.18 0.00 33.45 4.51
333 334 3.058160 CGAGCTTGGCCTTGGGTG 61.058 66.667 3.32 0.00 0.00 4.61
334 335 2.677875 GAGCTTGGCCTTGGGTGG 60.678 66.667 3.32 0.00 0.00 4.61
335 336 3.185203 AGCTTGGCCTTGGGTGGA 61.185 61.111 3.32 0.00 0.00 4.02
336 337 2.991540 GCTTGGCCTTGGGTGGAC 60.992 66.667 3.32 0.00 35.14 4.02
337 338 2.672996 CTTGGCCTTGGGTGGACG 60.673 66.667 3.32 0.00 38.15 4.79
338 339 3.172106 TTGGCCTTGGGTGGACGA 61.172 61.111 3.32 0.00 38.15 4.20
339 340 2.690653 CTTGGCCTTGGGTGGACGAA 62.691 60.000 3.32 0.00 38.15 3.85
340 341 2.114411 GGCCTTGGGTGGACGAAA 59.886 61.111 0.00 0.00 0.00 3.46
341 342 1.529713 GGCCTTGGGTGGACGAAAA 60.530 57.895 0.00 0.00 0.00 2.29
342 343 1.110518 GGCCTTGGGTGGACGAAAAA 61.111 55.000 0.00 0.00 0.00 1.94
343 344 0.031585 GCCTTGGGTGGACGAAAAAC 59.968 55.000 0.00 0.00 0.00 2.43
345 346 1.301423 CTTGGGTGGACGAAAAACGA 58.699 50.000 0.00 0.00 45.77 3.85
346 347 1.003223 CTTGGGTGGACGAAAAACGAC 60.003 52.381 0.00 0.00 45.77 4.34
347 348 0.178533 TGGGTGGACGAAAAACGACT 59.821 50.000 0.00 0.00 45.77 4.18
348 349 0.863799 GGGTGGACGAAAAACGACTC 59.136 55.000 0.00 0.00 45.77 3.36
349 350 0.505655 GGTGGACGAAAAACGACTCG 59.494 55.000 0.00 0.00 45.77 4.18
350 351 0.111398 GTGGACGAAAAACGACTCGC 60.111 55.000 0.00 0.00 45.77 5.03
351 352 0.249155 TGGACGAAAAACGACTCGCT 60.249 50.000 0.00 0.00 45.77 4.93
352 353 0.433871 GGACGAAAAACGACTCGCTC 59.566 55.000 0.00 0.00 45.77 5.03
353 354 1.126079 GACGAAAAACGACTCGCTCA 58.874 50.000 0.00 0.00 45.77 4.26
354 355 1.519758 GACGAAAAACGACTCGCTCAA 59.480 47.619 0.00 0.00 45.77 3.02
355 356 1.521423 ACGAAAAACGACTCGCTCAAG 59.479 47.619 0.00 0.00 45.77 3.02
356 357 1.784856 CGAAAAACGACTCGCTCAAGA 59.215 47.619 0.00 0.00 45.77 3.02
357 358 2.160091 CGAAAAACGACTCGCTCAAGAG 60.160 50.000 0.00 0.00 45.77 2.85
358 359 5.739701 CGAAAAACGACTCGCTCAAGAGC 62.740 52.174 11.94 11.94 46.89 4.09
376 377 2.203001 CATGCGTATGGTGGCCGA 60.203 61.111 5.47 0.00 0.00 5.54
377 378 2.108976 ATGCGTATGGTGGCCGAG 59.891 61.111 0.00 0.00 0.00 4.63
378 379 2.731571 ATGCGTATGGTGGCCGAGT 61.732 57.895 0.00 0.00 0.00 4.18
379 380 2.890474 GCGTATGGTGGCCGAGTG 60.890 66.667 0.00 0.00 0.00 3.51
380 381 2.577059 CGTATGGTGGCCGAGTGT 59.423 61.111 0.00 0.00 0.00 3.55
381 382 1.518572 CGTATGGTGGCCGAGTGTC 60.519 63.158 0.00 0.00 0.00 3.67
382 383 1.898154 GTATGGTGGCCGAGTGTCT 59.102 57.895 0.00 0.00 0.00 3.41
383 384 0.460284 GTATGGTGGCCGAGTGTCTG 60.460 60.000 0.00 0.00 0.00 3.51
384 385 0.902984 TATGGTGGCCGAGTGTCTGT 60.903 55.000 0.00 0.00 0.00 3.41
385 386 2.048127 GGTGGCCGAGTGTCTGTC 60.048 66.667 0.00 0.00 0.00 3.51
386 387 2.574955 GGTGGCCGAGTGTCTGTCT 61.575 63.158 0.00 0.00 0.00 3.41
387 388 1.367840 GTGGCCGAGTGTCTGTCTT 59.632 57.895 0.00 0.00 0.00 3.01
388 389 0.946221 GTGGCCGAGTGTCTGTCTTG 60.946 60.000 0.00 0.00 0.00 3.02
389 390 1.374758 GGCCGAGTGTCTGTCTTGG 60.375 63.158 0.00 0.00 38.97 3.61
390 391 1.666011 GCCGAGTGTCTGTCTTGGA 59.334 57.895 3.67 0.00 38.41 3.53
391 392 0.033504 GCCGAGTGTCTGTCTTGGAA 59.966 55.000 3.67 0.00 38.41 3.53
392 393 1.784525 CCGAGTGTCTGTCTTGGAAC 58.215 55.000 0.00 0.00 38.41 3.62
393 394 1.068588 CCGAGTGTCTGTCTTGGAACA 59.931 52.381 0.00 0.00 38.41 3.18
413 414 2.939460 AAAAACGAGCTGCACAAACT 57.061 40.000 1.02 0.00 0.00 2.66
414 415 2.193306 AAAACGAGCTGCACAAACTG 57.807 45.000 1.02 0.00 0.00 3.16
415 416 1.378531 AAACGAGCTGCACAAACTGA 58.621 45.000 1.02 0.00 0.00 3.41
416 417 0.657840 AACGAGCTGCACAAACTGAC 59.342 50.000 1.02 0.00 0.00 3.51
417 418 0.461870 ACGAGCTGCACAAACTGACA 60.462 50.000 1.02 0.00 0.00 3.58
418 419 0.657312 CGAGCTGCACAAACTGACAA 59.343 50.000 1.02 0.00 0.00 3.18
419 420 1.333524 CGAGCTGCACAAACTGACAAG 60.334 52.381 1.02 0.00 0.00 3.16
420 421 1.002033 GAGCTGCACAAACTGACAAGG 60.002 52.381 1.02 0.00 0.00 3.61
421 422 0.031178 GCTGCACAAACTGACAAGGG 59.969 55.000 0.00 0.00 0.00 3.95
422 423 1.392589 CTGCACAAACTGACAAGGGT 58.607 50.000 0.00 0.00 0.00 4.34
423 424 1.066002 CTGCACAAACTGACAAGGGTG 59.934 52.381 0.00 0.00 0.00 4.61
424 425 1.340502 TGCACAAACTGACAAGGGTGA 60.341 47.619 0.00 0.00 0.00 4.02
425 426 1.334869 GCACAAACTGACAAGGGTGAG 59.665 52.381 0.00 0.00 34.09 3.51
426 427 1.949525 CACAAACTGACAAGGGTGAGG 59.050 52.381 0.00 0.00 31.91 3.86
427 428 1.843851 ACAAACTGACAAGGGTGAGGA 59.156 47.619 0.00 0.00 31.91 3.71
428 429 2.222027 CAAACTGACAAGGGTGAGGAC 58.778 52.381 0.00 0.00 31.91 3.85
429 430 1.507140 AACTGACAAGGGTGAGGACA 58.493 50.000 0.00 0.00 31.91 4.02
430 431 1.507140 ACTGACAAGGGTGAGGACAA 58.493 50.000 0.00 0.00 31.91 3.18
431 432 1.843851 ACTGACAAGGGTGAGGACAAA 59.156 47.619 0.00 0.00 31.91 2.83
432 433 2.158755 ACTGACAAGGGTGAGGACAAAG 60.159 50.000 0.00 0.00 31.91 2.77
433 434 1.239347 GACAAGGGTGAGGACAAAGC 58.761 55.000 0.00 0.00 0.00 3.51
434 435 0.846693 ACAAGGGTGAGGACAAAGCT 59.153 50.000 0.00 0.00 0.00 3.74
435 436 2.038557 GACAAGGGTGAGGACAAAGCTA 59.961 50.000 0.00 0.00 0.00 3.32
436 437 2.039084 ACAAGGGTGAGGACAAAGCTAG 59.961 50.000 0.00 0.00 0.00 3.42
437 438 0.615850 AGGGTGAGGACAAAGCTAGC 59.384 55.000 6.62 6.62 0.00 3.42
438 439 0.393132 GGGTGAGGACAAAGCTAGCC 60.393 60.000 12.13 0.00 0.00 3.93
439 440 0.324943 GGTGAGGACAAAGCTAGCCA 59.675 55.000 12.13 0.00 0.00 4.75
440 441 1.065126 GGTGAGGACAAAGCTAGCCAT 60.065 52.381 12.13 0.00 0.00 4.40
441 442 2.012673 GTGAGGACAAAGCTAGCCATG 58.987 52.381 12.13 13.31 0.00 3.66
442 443 1.908619 TGAGGACAAAGCTAGCCATGA 59.091 47.619 20.66 0.00 0.00 3.07
443 444 2.093288 TGAGGACAAAGCTAGCCATGAG 60.093 50.000 20.66 6.54 0.00 2.90
444 445 1.211457 AGGACAAAGCTAGCCATGAGG 59.789 52.381 20.66 4.93 38.23 3.86
445 446 1.065126 GGACAAAGCTAGCCATGAGGT 60.065 52.381 20.66 7.83 37.19 3.85
446 447 2.284190 GACAAAGCTAGCCATGAGGTC 58.716 52.381 20.66 12.32 37.19 3.85
447 448 1.293924 CAAAGCTAGCCATGAGGTCG 58.706 55.000 12.13 0.00 37.19 4.79
448 449 0.905357 AAAGCTAGCCATGAGGTCGT 59.095 50.000 12.13 0.00 37.19 4.34
449 450 0.461961 AAGCTAGCCATGAGGTCGTC 59.538 55.000 12.13 0.00 37.19 4.20
450 451 1.068250 GCTAGCCATGAGGTCGTCC 59.932 63.158 2.29 0.00 37.19 4.79
451 452 1.676678 GCTAGCCATGAGGTCGTCCA 61.677 60.000 2.29 0.00 37.19 4.02
452 453 0.387202 CTAGCCATGAGGTCGTCCAG 59.613 60.000 0.51 0.00 37.19 3.86
453 454 1.676678 TAGCCATGAGGTCGTCCAGC 61.677 60.000 0.51 0.00 37.19 4.85
454 455 2.187946 CCATGAGGTCGTCCAGCC 59.812 66.667 0.51 0.00 35.89 4.85
455 456 2.187946 CATGAGGTCGTCCAGCCC 59.812 66.667 0.51 0.00 35.89 5.19
456 457 3.083997 ATGAGGTCGTCCAGCCCC 61.084 66.667 0.51 0.00 35.89 5.80
457 458 3.924013 ATGAGGTCGTCCAGCCCCA 62.924 63.158 0.51 0.00 35.89 4.96
458 459 3.775654 GAGGTCGTCCAGCCCCAG 61.776 72.222 0.51 0.00 35.89 4.45
470 471 3.636231 CCCCAGCCGGAGACACAA 61.636 66.667 5.05 0.00 0.00 3.33
471 472 2.429930 CCCAGCCGGAGACACAAA 59.570 61.111 5.05 0.00 0.00 2.83
472 473 1.966451 CCCAGCCGGAGACACAAAC 60.966 63.158 5.05 0.00 0.00 2.93
473 474 1.966451 CCAGCCGGAGACACAAACC 60.966 63.158 5.05 0.00 0.00 3.27
474 475 2.030562 AGCCGGAGACACAAACCG 59.969 61.111 5.05 0.00 45.24 4.44
477 478 2.280524 CGGAGACACAAACCGGCA 60.281 61.111 0.00 0.00 42.48 5.69
478 479 2.317609 CGGAGACACAAACCGGCAG 61.318 63.158 0.00 0.00 42.48 4.85
479 480 1.966451 GGAGACACAAACCGGCAGG 60.966 63.158 0.00 0.00 45.13 4.85
489 490 4.308458 CCGGCAGGTCAACGTCCA 62.308 66.667 0.00 0.00 0.00 4.02
490 491 3.041940 CGGCAGGTCAACGTCCAC 61.042 66.667 0.00 0.00 0.00 4.02
491 492 3.041940 GGCAGGTCAACGTCCACG 61.042 66.667 0.00 0.00 46.33 4.94
492 493 3.712881 GCAGGTCAACGTCCACGC 61.713 66.667 0.00 0.00 44.43 5.34
493 494 3.041940 CAGGTCAACGTCCACGCC 61.042 66.667 0.00 0.00 44.43 5.68
494 495 4.309950 AGGTCAACGTCCACGCCC 62.310 66.667 0.00 0.00 44.43 6.13
495 496 4.309950 GGTCAACGTCCACGCCCT 62.310 66.667 0.00 0.00 44.43 5.19
496 497 2.737376 GTCAACGTCCACGCCCTC 60.737 66.667 0.00 0.00 44.43 4.30
497 498 3.998672 TCAACGTCCACGCCCTCC 61.999 66.667 0.00 0.00 44.43 4.30
498 499 4.308458 CAACGTCCACGCCCTCCA 62.308 66.667 0.00 0.00 44.43 3.86
499 500 4.309950 AACGTCCACGCCCTCCAC 62.310 66.667 0.00 0.00 44.43 4.02
501 502 4.742201 CGTCCACGCCCTCCACAG 62.742 72.222 0.00 0.00 0.00 3.66
502 503 3.626924 GTCCACGCCCTCCACAGT 61.627 66.667 0.00 0.00 0.00 3.55
503 504 2.118732 TCCACGCCCTCCACAGTA 59.881 61.111 0.00 0.00 0.00 2.74
504 505 1.305802 TCCACGCCCTCCACAGTAT 60.306 57.895 0.00 0.00 0.00 2.12
505 506 0.907704 TCCACGCCCTCCACAGTATT 60.908 55.000 0.00 0.00 0.00 1.89
506 507 0.744414 CCACGCCCTCCACAGTATTG 60.744 60.000 0.00 0.00 0.00 1.90
507 508 0.249120 CACGCCCTCCACAGTATTGA 59.751 55.000 0.00 0.00 0.00 2.57
508 509 0.981183 ACGCCCTCCACAGTATTGAA 59.019 50.000 0.00 0.00 0.00 2.69
509 510 1.349688 ACGCCCTCCACAGTATTGAAA 59.650 47.619 0.00 0.00 0.00 2.69
510 511 1.737793 CGCCCTCCACAGTATTGAAAC 59.262 52.381 0.00 0.00 0.00 2.78
511 512 2.790433 GCCCTCCACAGTATTGAAACA 58.210 47.619 0.00 0.00 0.00 2.83
512 513 3.356290 GCCCTCCACAGTATTGAAACAT 58.644 45.455 0.00 0.00 0.00 2.71
563 564 3.677190 GCATGAGCTGACTTGAGAATG 57.323 47.619 0.00 0.00 37.91 2.67
564 565 3.268330 GCATGAGCTGACTTGAGAATGA 58.732 45.455 0.00 0.00 37.91 2.57
568 569 4.502016 TGAGCTGACTTGAGAATGATGTC 58.498 43.478 0.00 0.00 0.00 3.06
635 636 1.213678 CCCAGATCCAGCAGAATCCAA 59.786 52.381 0.00 0.00 0.00 3.53
636 637 2.158505 CCCAGATCCAGCAGAATCCAAT 60.159 50.000 0.00 0.00 0.00 3.16
637 638 3.147629 CCAGATCCAGCAGAATCCAATC 58.852 50.000 0.00 0.00 0.00 2.67
638 639 3.147629 CAGATCCAGCAGAATCCAATCC 58.852 50.000 0.00 0.00 0.00 3.01
639 640 2.107901 AGATCCAGCAGAATCCAATCCC 59.892 50.000 0.00 0.00 0.00 3.85
640 641 0.552848 TCCAGCAGAATCCAATCCCC 59.447 55.000 0.00 0.00 0.00 4.81
641 642 0.554792 CCAGCAGAATCCAATCCCCT 59.445 55.000 0.00 0.00 0.00 4.79
642 643 1.478288 CCAGCAGAATCCAATCCCCTC 60.478 57.143 0.00 0.00 0.00 4.30
643 644 0.849417 AGCAGAATCCAATCCCCTCC 59.151 55.000 0.00 0.00 0.00 4.30
644 645 0.178978 GCAGAATCCAATCCCCTCCC 60.179 60.000 0.00 0.00 0.00 4.30
645 646 1.527457 CAGAATCCAATCCCCTCCCT 58.473 55.000 0.00 0.00 0.00 4.20
646 647 1.423161 CAGAATCCAATCCCCTCCCTC 59.577 57.143 0.00 0.00 0.00 4.30
647 648 1.011293 AGAATCCAATCCCCTCCCTCA 59.989 52.381 0.00 0.00 0.00 3.86
648 649 2.068977 GAATCCAATCCCCTCCCTCAT 58.931 52.381 0.00 0.00 0.00 2.90
649 650 1.453633 ATCCAATCCCCTCCCTCATG 58.546 55.000 0.00 0.00 0.00 3.07
650 651 1.152368 CCAATCCCCTCCCTCATGC 59.848 63.158 0.00 0.00 0.00 4.06
651 652 1.358830 CCAATCCCCTCCCTCATGCT 61.359 60.000 0.00 0.00 0.00 3.79
652 653 0.110104 CAATCCCCTCCCTCATGCTC 59.890 60.000 0.00 0.00 0.00 4.26
653 654 0.029267 AATCCCCTCCCTCATGCTCT 60.029 55.000 0.00 0.00 0.00 4.09
654 655 0.029267 ATCCCCTCCCTCATGCTCTT 60.029 55.000 0.00 0.00 0.00 2.85
655 656 0.692419 TCCCCTCCCTCATGCTCTTC 60.692 60.000 0.00 0.00 0.00 2.87
656 657 0.984961 CCCCTCCCTCATGCTCTTCA 60.985 60.000 0.00 0.00 0.00 3.02
657 658 1.138568 CCCTCCCTCATGCTCTTCAT 58.861 55.000 0.00 0.00 35.31 2.57
658 659 1.493871 CCCTCCCTCATGCTCTTCATT 59.506 52.381 0.00 0.00 31.79 2.57
659 660 2.486907 CCCTCCCTCATGCTCTTCATTC 60.487 54.545 0.00 0.00 31.79 2.67
660 661 2.438763 CCTCCCTCATGCTCTTCATTCT 59.561 50.000 0.00 0.00 31.79 2.40
661 662 3.468770 CTCCCTCATGCTCTTCATTCTG 58.531 50.000 0.00 0.00 31.79 3.02
662 663 2.842496 TCCCTCATGCTCTTCATTCTGT 59.158 45.455 0.00 0.00 31.79 3.41
663 664 3.265221 TCCCTCATGCTCTTCATTCTGTT 59.735 43.478 0.00 0.00 31.79 3.16
664 665 3.626670 CCCTCATGCTCTTCATTCTGTTC 59.373 47.826 0.00 0.00 31.79 3.18
665 666 4.515361 CCTCATGCTCTTCATTCTGTTCT 58.485 43.478 0.00 0.00 31.79 3.01
666 667 4.333095 CCTCATGCTCTTCATTCTGTTCTG 59.667 45.833 0.00 0.00 31.79 3.02
667 668 4.259356 TCATGCTCTTCATTCTGTTCTGG 58.741 43.478 0.00 0.00 31.79 3.86
668 669 4.019950 TCATGCTCTTCATTCTGTTCTGGA 60.020 41.667 0.00 0.00 31.79 3.86
669 670 4.564782 TGCTCTTCATTCTGTTCTGGAT 57.435 40.909 0.00 0.00 0.00 3.41
670 671 4.259356 TGCTCTTCATTCTGTTCTGGATG 58.741 43.478 0.00 0.00 0.00 3.51
757 763 0.984961 CCCCTCCCTCATGCTCTTCA 60.985 60.000 0.00 0.00 0.00 3.02
797 808 6.498304 CACCACATAAATGTCTAATTGCTCC 58.502 40.000 0.00 0.00 39.39 4.70
831 3169 1.805345 CTTGGCTTCTGCTTCTGTCTG 59.195 52.381 0.00 0.00 39.59 3.51
840 3178 1.963515 TGCTTCTGTCTGCAGTGAGTA 59.036 47.619 14.67 3.97 43.05 2.59
841 3179 2.029560 TGCTTCTGTCTGCAGTGAGTAG 60.030 50.000 14.67 13.81 43.05 2.57
842 3180 2.673610 GCTTCTGTCTGCAGTGAGTAGG 60.674 54.545 14.67 6.76 43.05 3.18
872 3210 3.065925 CAGCAGCAAATTAGCTAGGTTCC 59.934 47.826 0.00 0.00 44.54 3.62
877 3215 3.804873 GCAAATTAGCTAGGTTCCTCTCG 59.195 47.826 0.00 0.00 0.00 4.04
998 3356 2.589014 GCAGCAGAAATCGTTTTGAGG 58.411 47.619 0.00 0.00 0.00 3.86
1170 3528 1.443828 GATGGAGAGGGGCGAGAAC 59.556 63.158 0.00 0.00 0.00 3.01
1262 3620 0.329596 AACATCTTGGCCAGGGAGAC 59.670 55.000 15.86 0.00 0.00 3.36
1392 3750 2.026449 AGTTGGGGCAATCTTCAGAGAG 60.026 50.000 0.00 0.00 34.85 3.20
1398 3756 1.322936 GCAATCTTCAGAGAGTTCGCG 59.677 52.381 0.00 0.00 34.85 5.87
1411 3769 3.684788 AGAGTTCGCGAAATACAGCATTT 59.315 39.130 25.24 0.00 39.63 2.32
1437 3795 1.478510 AGTACTGGCCTGAATGAGACG 59.521 52.381 17.64 0.00 0.00 4.18
1441 3799 0.532573 TGGCCTGAATGAGACGAGAC 59.467 55.000 3.32 0.00 0.00 3.36
1465 3823 5.297029 CACAGTATGGATGAGAACGAGAGTA 59.703 44.000 0.00 0.00 43.79 2.59
1491 3849 0.318441 CAAGAAGACTGACGCTCCCA 59.682 55.000 0.00 0.00 0.00 4.37
1863 4221 7.288810 AGTCTTAGATGATGTCTGGAGAATC 57.711 40.000 0.00 0.00 37.83 2.52
1962 4320 1.901833 GCAGTTTCCAATCACCCCAAT 59.098 47.619 0.00 0.00 0.00 3.16
2050 4408 1.777272 AGGCATTCCCTTCCTATGTCC 59.223 52.381 0.00 0.00 43.06 4.02
2096 4454 2.626840 CTTCAGAGAACTAGGCAAGGC 58.373 52.381 0.00 0.00 0.00 4.35
2112 4470 2.302733 CAAGGCCCTTGCATTAAAAGGT 59.697 45.455 11.22 0.00 39.97 3.50
2200 4558 1.538047 GAGAAGAATGGTTGCCAGCA 58.462 50.000 0.00 0.00 36.75 4.41
2223 4581 4.525912 AAACTGGGATGCAATGAAGAAC 57.474 40.909 0.00 0.00 0.00 3.01
2285 4643 6.611613 TGATCTGTCAAGTAATCTGAAGGT 57.388 37.500 0.00 0.00 0.00 3.50
2322 4680 6.100859 ACATCACATCATTCCCAGAAGACTAT 59.899 38.462 0.00 0.00 0.00 2.12
2384 4742 1.149987 GGTTTCATACCGAACGTGCA 58.850 50.000 0.00 0.00 37.12 4.57
2740 5098 0.618458 AGGCTTGAATTACCTGCGGA 59.382 50.000 0.00 0.00 30.82 5.54
2851 5209 3.054434 TGGCACATATGTACTTCCTGCTT 60.054 43.478 8.32 0.00 0.00 3.91
2934 5292 5.480642 TCCCTATTGATCTCTTGAGCATC 57.519 43.478 0.00 0.00 38.48 3.91
2952 5310 2.820059 TCTCGACACTGAAGCATGTT 57.180 45.000 0.00 0.00 0.00 2.71
2997 5355 1.822990 TCCGTGTGGAAGACTACCATC 59.177 52.381 0.00 0.00 42.85 3.51
3082 5440 4.096081 GGAGCAATTGACAGAATGGAAGAG 59.904 45.833 10.34 0.00 43.62 2.85
3268 5626 0.928505 ATGATGAAGACCCCATGCCA 59.071 50.000 0.00 0.00 0.00 4.92
3269 5627 0.928505 TGATGAAGACCCCATGCCAT 59.071 50.000 0.00 0.00 0.00 4.40
3270 5628 1.288633 TGATGAAGACCCCATGCCATT 59.711 47.619 0.00 0.00 0.00 3.16
3424 5782 2.982488 GGAGTGGATATTGGAGGATGGT 59.018 50.000 0.00 0.00 0.00 3.55
3435 5793 1.380785 AGGATGGTGCCATGCCAAG 60.381 57.895 17.26 0.00 44.29 3.61
3476 5834 1.311859 CAAGTGCACCAAGCTGAAGA 58.688 50.000 14.63 0.00 45.94 2.87
3688 6046 2.756760 CAGCTGGTAGAACAATGCCATT 59.243 45.455 5.57 0.00 34.19 3.16
3700 6058 4.935702 ACAATGCCATTAAATCCATCGTG 58.064 39.130 0.00 0.00 0.00 4.35
3716 6078 3.844577 TCGTGAGCTGGTACTTAACTC 57.155 47.619 0.00 0.00 0.00 3.01
3737 6101 6.518493 ACTCGTTTCACCTGAGTTAAATACA 58.482 36.000 0.00 0.00 39.87 2.29
3742 6108 8.166706 CGTTTCACCTGAGTTAAATACACATAC 58.833 37.037 0.00 0.00 0.00 2.39
3783 6149 4.158764 AGAGAGAGGACAGAAATAACGGTG 59.841 45.833 0.00 0.00 0.00 4.94
3787 6153 1.467342 GGACAGAAATAACGGTGGCAC 59.533 52.381 9.70 9.70 0.00 5.01
3791 6157 0.725117 GAAATAACGGTGGCACGGAG 59.275 55.000 28.85 16.81 38.39 4.63
3806 6173 2.729882 CACGGAGAACCTCAAAGTAACG 59.270 50.000 0.00 0.00 31.08 3.18
3862 6392 9.787532 TCAGTTTTAACATTTAGCATGCTATTC 57.212 29.630 27.35 7.51 0.00 1.75
3879 6412 5.768317 GCTATTCAAAGCACCACTGTTTTA 58.232 37.500 0.00 0.00 42.30 1.52
4005 6555 1.674441 CACTGCCATCTTACATGCTGG 59.326 52.381 0.00 0.00 0.00 4.85
4006 6556 1.315690 CTGCCATCTTACATGCTGGG 58.684 55.000 0.00 0.00 0.00 4.45
4007 6557 0.106569 TGCCATCTTACATGCTGGGG 60.107 55.000 0.00 0.00 0.00 4.96
4008 6558 1.458639 GCCATCTTACATGCTGGGGC 61.459 60.000 0.00 0.00 39.26 5.80
4009 6559 0.825010 CCATCTTACATGCTGGGGCC 60.825 60.000 0.00 0.00 37.74 5.80
4010 6560 0.184451 CATCTTACATGCTGGGGCCT 59.816 55.000 0.84 0.00 37.74 5.19
4044 6594 3.655276 TCTTCGAAAGGTGTACAGGTC 57.345 47.619 0.00 0.00 0.00 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 2.402388 CCAAGCAGCTTCGCGATG 59.598 61.111 10.88 14.54 36.85 3.84
14 15 2.821366 CCCAAGCAGCTTCGCGAT 60.821 61.111 10.88 0.00 36.85 4.58
15 16 4.314440 ACCCAAGCAGCTTCGCGA 62.314 61.111 3.71 3.71 36.85 5.87
16 17 4.093952 CACCCAAGCAGCTTCGCG 62.094 66.667 4.07 0.00 36.85 5.87
17 18 4.410743 GCACCCAAGCAGCTTCGC 62.411 66.667 4.07 2.10 0.00 4.70
18 19 3.741476 GGCACCCAAGCAGCTTCG 61.741 66.667 4.07 0.00 35.83 3.79
31 32 4.011698 TCCTTAAATAAACGAAGGGGCAC 58.988 43.478 0.00 0.00 40.23 5.01
32 33 4.304048 TCCTTAAATAAACGAAGGGGCA 57.696 40.909 0.00 0.00 40.23 5.36
33 34 4.439700 GCTTCCTTAAATAAACGAAGGGGC 60.440 45.833 0.00 0.00 40.23 5.80
34 35 4.948004 AGCTTCCTTAAATAAACGAAGGGG 59.052 41.667 0.00 0.00 40.23 4.79
35 36 5.880887 AGAGCTTCCTTAAATAAACGAAGGG 59.119 40.000 0.00 0.00 40.23 3.95
36 37 6.037281 GGAGAGCTTCCTTAAATAAACGAAGG 59.963 42.308 7.46 0.00 43.16 3.46
37 38 7.006187 GGAGAGCTTCCTTAAATAAACGAAG 57.994 40.000 7.46 0.00 43.16 3.79
38 39 6.980051 GGAGAGCTTCCTTAAATAAACGAA 57.020 37.500 7.46 0.00 43.16 3.85
55 56 0.250901 TGAAACCCAAGCAGGAGAGC 60.251 55.000 0.00 0.00 41.22 4.09
56 57 1.349026 TCTGAAACCCAAGCAGGAGAG 59.651 52.381 0.00 0.00 41.22 3.20
57 58 1.349026 CTCTGAAACCCAAGCAGGAGA 59.651 52.381 0.00 0.00 41.22 3.71
58 59 1.072965 ACTCTGAAACCCAAGCAGGAG 59.927 52.381 0.00 0.00 41.22 3.69
59 60 1.140312 ACTCTGAAACCCAAGCAGGA 58.860 50.000 0.00 0.00 41.22 3.86
60 61 1.242076 CACTCTGAAACCCAAGCAGG 58.758 55.000 0.00 0.00 37.03 4.85
61 62 1.972872 ACACTCTGAAACCCAAGCAG 58.027 50.000 0.00 0.00 0.00 4.24
62 63 2.023673 CAACACTCTGAAACCCAAGCA 58.976 47.619 0.00 0.00 0.00 3.91
63 64 2.024414 ACAACACTCTGAAACCCAAGC 58.976 47.619 0.00 0.00 0.00 4.01
64 65 3.313526 CAGACAACACTCTGAAACCCAAG 59.686 47.826 0.00 0.00 40.28 3.61
65 66 3.278574 CAGACAACACTCTGAAACCCAA 58.721 45.455 0.00 0.00 40.28 4.12
66 67 2.238646 ACAGACAACACTCTGAAACCCA 59.761 45.455 3.23 0.00 40.28 4.51
67 68 2.919228 ACAGACAACACTCTGAAACCC 58.081 47.619 3.23 0.00 40.28 4.11
68 69 4.965119 AAACAGACAACACTCTGAAACC 57.035 40.909 3.23 0.00 40.28 3.27
69 70 6.612306 AGAAAAACAGACAACACTCTGAAAC 58.388 36.000 3.23 0.00 40.28 2.78
70 71 6.817765 AGAAAAACAGACAACACTCTGAAA 57.182 33.333 3.23 0.00 40.28 2.69
71 72 6.817765 AAGAAAAACAGACAACACTCTGAA 57.182 33.333 3.23 0.00 40.28 3.02
72 73 6.817765 AAAGAAAAACAGACAACACTCTGA 57.182 33.333 3.23 0.00 40.28 3.27
73 74 7.809806 AGAAAAAGAAAAACAGACAACACTCTG 59.190 33.333 0.00 0.00 43.06 3.35
74 75 7.886338 AGAAAAAGAAAAACAGACAACACTCT 58.114 30.769 0.00 0.00 0.00 3.24
75 76 8.520835 AAGAAAAAGAAAAACAGACAACACTC 57.479 30.769 0.00 0.00 0.00 3.51
76 77 8.887036 AAAGAAAAAGAAAAACAGACAACACT 57.113 26.923 0.00 0.00 0.00 3.55
77 78 9.929722 AAAAAGAAAAAGAAAAACAGACAACAC 57.070 25.926 0.00 0.00 0.00 3.32
100 101 7.121168 ACAGACAACACTCTGAATTCTCAAAAA 59.879 33.333 7.05 0.00 40.28 1.94
101 102 6.599244 ACAGACAACACTCTGAATTCTCAAAA 59.401 34.615 7.05 0.00 40.28 2.44
102 103 6.115446 ACAGACAACACTCTGAATTCTCAAA 58.885 36.000 7.05 0.00 40.28 2.69
103 104 5.674525 ACAGACAACACTCTGAATTCTCAA 58.325 37.500 7.05 0.00 40.28 3.02
104 105 5.282055 ACAGACAACACTCTGAATTCTCA 57.718 39.130 7.05 0.00 40.28 3.27
105 106 6.610741 AAACAGACAACACTCTGAATTCTC 57.389 37.500 7.05 0.00 40.28 2.87
106 107 7.396540 AAAAACAGACAACACTCTGAATTCT 57.603 32.000 7.05 0.00 40.28 2.40
128 129 9.457436 CAGTAAAATCTAGCTTTACCCCTAAAA 57.543 33.333 17.14 0.00 39.18 1.52
129 130 7.555195 GCAGTAAAATCTAGCTTTACCCCTAAA 59.445 37.037 17.14 0.00 39.18 1.85
130 131 7.052248 GCAGTAAAATCTAGCTTTACCCCTAA 58.948 38.462 17.14 0.00 39.18 2.69
131 132 6.386050 AGCAGTAAAATCTAGCTTTACCCCTA 59.614 38.462 17.14 0.00 39.18 3.53
132 133 5.191921 AGCAGTAAAATCTAGCTTTACCCCT 59.808 40.000 17.14 12.95 39.18 4.79
133 134 5.437946 AGCAGTAAAATCTAGCTTTACCCC 58.562 41.667 17.14 11.62 39.18 4.95
134 135 6.113411 TGAGCAGTAAAATCTAGCTTTACCC 58.887 40.000 17.14 11.85 39.18 3.69
135 136 7.611213 TTGAGCAGTAAAATCTAGCTTTACC 57.389 36.000 17.14 8.42 39.18 2.85
136 137 9.893305 TTTTTGAGCAGTAAAATCTAGCTTTAC 57.107 29.630 14.69 14.69 38.83 2.01
137 138 9.893305 GTTTTTGAGCAGTAAAATCTAGCTTTA 57.107 29.630 0.00 0.00 35.36 1.85
138 139 7.867909 GGTTTTTGAGCAGTAAAATCTAGCTTT 59.132 33.333 0.00 0.00 35.36 3.51
139 140 7.231519 AGGTTTTTGAGCAGTAAAATCTAGCTT 59.768 33.333 0.00 0.00 33.99 3.74
140 141 6.717084 AGGTTTTTGAGCAGTAAAATCTAGCT 59.283 34.615 0.00 0.00 33.99 3.32
141 142 6.914259 AGGTTTTTGAGCAGTAAAATCTAGC 58.086 36.000 0.00 0.00 33.99 3.42
142 143 8.567948 TCAAGGTTTTTGAGCAGTAAAATCTAG 58.432 33.333 0.00 0.00 34.50 2.43
143 144 8.349983 GTCAAGGTTTTTGAGCAGTAAAATCTA 58.650 33.333 0.00 0.00 34.50 1.98
144 145 7.147915 TGTCAAGGTTTTTGAGCAGTAAAATCT 60.148 33.333 0.00 0.00 36.52 2.40
145 146 6.978080 TGTCAAGGTTTTTGAGCAGTAAAATC 59.022 34.615 0.00 0.00 0.00 2.17
146 147 6.872920 TGTCAAGGTTTTTGAGCAGTAAAAT 58.127 32.000 0.00 0.00 0.00 1.82
147 148 6.274157 TGTCAAGGTTTTTGAGCAGTAAAA 57.726 33.333 0.00 0.00 0.00 1.52
148 149 5.906113 TGTCAAGGTTTTTGAGCAGTAAA 57.094 34.783 0.00 0.00 0.00 2.01
149 150 5.184096 TGTTGTCAAGGTTTTTGAGCAGTAA 59.816 36.000 0.00 0.00 0.00 2.24
150 151 4.702612 TGTTGTCAAGGTTTTTGAGCAGTA 59.297 37.500 0.00 0.00 0.00 2.74
151 152 3.509575 TGTTGTCAAGGTTTTTGAGCAGT 59.490 39.130 0.00 0.00 0.00 4.40
152 153 3.859386 GTGTTGTCAAGGTTTTTGAGCAG 59.141 43.478 0.00 0.00 0.00 4.24
153 154 3.256879 TGTGTTGTCAAGGTTTTTGAGCA 59.743 39.130 0.00 0.00 0.00 4.26
154 155 3.843999 TGTGTTGTCAAGGTTTTTGAGC 58.156 40.909 0.00 0.00 0.00 4.26
155 156 4.858692 CACTGTGTTGTCAAGGTTTTTGAG 59.141 41.667 0.00 0.00 0.00 3.02
156 157 4.804108 CACTGTGTTGTCAAGGTTTTTGA 58.196 39.130 0.00 0.00 0.00 2.69
157 158 3.367630 GCACTGTGTTGTCAAGGTTTTTG 59.632 43.478 9.86 0.00 0.00 2.44
158 159 3.584834 GCACTGTGTTGTCAAGGTTTTT 58.415 40.909 9.86 0.00 0.00 1.94
159 160 2.415357 CGCACTGTGTTGTCAAGGTTTT 60.415 45.455 9.86 0.00 0.00 2.43
160 161 1.132262 CGCACTGTGTTGTCAAGGTTT 59.868 47.619 9.86 0.00 0.00 3.27
161 162 0.732571 CGCACTGTGTTGTCAAGGTT 59.267 50.000 9.86 0.00 0.00 3.50
162 163 0.392461 ACGCACTGTGTTGTCAAGGT 60.392 50.000 9.86 0.00 0.00 3.50
163 164 0.027979 CACGCACTGTGTTGTCAAGG 59.972 55.000 9.86 0.00 43.88 3.61
164 165 3.514510 CACGCACTGTGTTGTCAAG 57.485 52.632 9.86 0.00 43.88 3.02
180 181 4.570663 CTCGATCCGGCGGGTCAC 62.571 72.222 35.73 13.96 33.83 3.67
186 187 2.459421 AATACGAGCTCGATCCGGCG 62.459 60.000 40.58 14.47 43.02 6.46
187 188 0.318784 AAATACGAGCTCGATCCGGC 60.319 55.000 40.58 0.00 43.02 6.13
188 189 2.135664 AAAATACGAGCTCGATCCGG 57.864 50.000 40.58 12.87 43.02 5.14
189 190 5.154932 AGAATAAAATACGAGCTCGATCCG 58.845 41.667 40.58 16.87 43.02 4.18
190 191 6.128795 CCAAGAATAAAATACGAGCTCGATCC 60.129 42.308 40.58 12.26 43.02 3.36
191 192 6.616682 GCCAAGAATAAAATACGAGCTCGATC 60.617 42.308 40.58 22.04 43.02 3.69
192 193 5.177696 GCCAAGAATAAAATACGAGCTCGAT 59.822 40.000 40.58 25.46 43.02 3.59
193 194 4.506654 GCCAAGAATAAAATACGAGCTCGA 59.493 41.667 40.58 24.42 43.02 4.04
194 195 4.318831 GGCCAAGAATAAAATACGAGCTCG 60.319 45.833 33.45 33.45 46.33 5.03
195 196 4.816925 AGGCCAAGAATAAAATACGAGCTC 59.183 41.667 5.01 2.73 0.00 4.09
196 197 4.781934 AGGCCAAGAATAAAATACGAGCT 58.218 39.130 5.01 0.00 0.00 4.09
197 198 4.574828 TGAGGCCAAGAATAAAATACGAGC 59.425 41.667 5.01 0.00 0.00 5.03
198 199 6.073003 GGATGAGGCCAAGAATAAAATACGAG 60.073 42.308 5.01 0.00 0.00 4.18
199 200 5.763204 GGATGAGGCCAAGAATAAAATACGA 59.237 40.000 5.01 0.00 0.00 3.43
200 201 5.765182 AGGATGAGGCCAAGAATAAAATACG 59.235 40.000 5.01 0.00 0.00 3.06
201 202 6.207614 GGAGGATGAGGCCAAGAATAAAATAC 59.792 42.308 5.01 0.00 0.00 1.89
202 203 6.306987 GGAGGATGAGGCCAAGAATAAAATA 58.693 40.000 5.01 0.00 0.00 1.40
203 204 5.143369 GGAGGATGAGGCCAAGAATAAAAT 58.857 41.667 5.01 0.00 0.00 1.82
204 205 4.536765 GGAGGATGAGGCCAAGAATAAAA 58.463 43.478 5.01 0.00 0.00 1.52
205 206 3.117512 GGGAGGATGAGGCCAAGAATAAA 60.118 47.826 5.01 0.00 0.00 1.40
206 207 2.443255 GGGAGGATGAGGCCAAGAATAA 59.557 50.000 5.01 0.00 0.00 1.40
207 208 2.057922 GGGAGGATGAGGCCAAGAATA 58.942 52.381 5.01 0.00 0.00 1.75
208 209 0.849417 GGGAGGATGAGGCCAAGAAT 59.151 55.000 5.01 0.00 0.00 2.40
209 210 0.253347 AGGGAGGATGAGGCCAAGAA 60.253 55.000 5.01 0.00 0.00 2.52
210 211 0.692419 GAGGGAGGATGAGGCCAAGA 60.692 60.000 5.01 0.00 0.00 3.02
211 212 1.704007 GGAGGGAGGATGAGGCCAAG 61.704 65.000 5.01 0.00 0.00 3.61
212 213 1.694169 GGAGGGAGGATGAGGCCAA 60.694 63.158 5.01 0.00 0.00 4.52
213 214 2.040464 GGAGGGAGGATGAGGCCA 60.040 66.667 5.01 0.00 0.00 5.36
214 215 3.237741 CGGAGGGAGGATGAGGCC 61.238 72.222 0.00 0.00 0.00 5.19
240 241 3.851845 TTGTCGTCGACGCCCTTGG 62.852 63.158 32.19 5.51 39.60 3.61
241 242 1.886861 CTTTGTCGTCGACGCCCTTG 61.887 60.000 32.19 17.48 39.60 3.61
242 243 1.663702 CTTTGTCGTCGACGCCCTT 60.664 57.895 32.19 0.00 39.60 3.95
243 244 2.049433 CTTTGTCGTCGACGCCCT 60.049 61.111 32.19 0.00 39.60 5.19
244 245 3.774702 GCTTTGTCGTCGACGCCC 61.775 66.667 32.19 23.76 39.60 6.13
245 246 2.733593 AGCTTTGTCGTCGACGCC 60.734 61.111 32.19 23.24 39.60 5.68
246 247 1.545614 TTCAGCTTTGTCGTCGACGC 61.546 55.000 32.19 25.53 39.60 5.19
247 248 0.431233 CTTCAGCTTTGTCGTCGACG 59.569 55.000 31.30 31.30 41.45 5.12
248 249 0.161870 GCTTCAGCTTTGTCGTCGAC 59.838 55.000 18.51 18.51 38.21 4.20
249 250 0.944311 GGCTTCAGCTTTGTCGTCGA 60.944 55.000 0.00 0.00 41.70 4.20
250 251 1.221466 TGGCTTCAGCTTTGTCGTCG 61.221 55.000 0.00 0.00 41.70 5.12
251 252 1.135859 CATGGCTTCAGCTTTGTCGTC 60.136 52.381 0.00 0.00 41.70 4.20
252 253 0.877071 CATGGCTTCAGCTTTGTCGT 59.123 50.000 0.00 0.00 41.70 4.34
253 254 0.169672 CCATGGCTTCAGCTTTGTCG 59.830 55.000 0.00 0.00 41.70 4.35
254 255 0.529378 CCCATGGCTTCAGCTTTGTC 59.471 55.000 6.09 0.00 41.70 3.18
255 256 0.178953 ACCCATGGCTTCAGCTTTGT 60.179 50.000 6.09 0.00 41.70 2.83
256 257 1.747355 CTACCCATGGCTTCAGCTTTG 59.253 52.381 6.09 0.00 41.70 2.77
257 258 1.635487 TCTACCCATGGCTTCAGCTTT 59.365 47.619 6.09 0.00 41.70 3.51
258 259 1.289160 TCTACCCATGGCTTCAGCTT 58.711 50.000 6.09 0.00 41.70 3.74
259 260 1.289160 TTCTACCCATGGCTTCAGCT 58.711 50.000 6.09 0.00 41.70 4.24
260 261 2.128771 TTTCTACCCATGGCTTCAGC 57.871 50.000 6.09 0.00 41.14 4.26
261 262 2.360165 GCATTTCTACCCATGGCTTCAG 59.640 50.000 6.09 0.00 0.00 3.02
262 263 2.291475 TGCATTTCTACCCATGGCTTCA 60.291 45.455 6.09 0.00 0.00 3.02
263 264 2.360165 CTGCATTTCTACCCATGGCTTC 59.640 50.000 6.09 0.00 0.00 3.86
264 265 2.381911 CTGCATTTCTACCCATGGCTT 58.618 47.619 6.09 0.00 0.00 4.35
265 266 2.025863 GCTGCATTTCTACCCATGGCT 61.026 52.381 6.09 0.00 0.00 4.75
266 267 0.386838 GCTGCATTTCTACCCATGGC 59.613 55.000 6.09 0.00 0.00 4.40
267 268 0.664761 CGCTGCATTTCTACCCATGG 59.335 55.000 4.14 4.14 0.00 3.66
268 269 0.029834 GCGCTGCATTTCTACCCATG 59.970 55.000 0.00 0.00 0.00 3.66
269 270 0.107017 AGCGCTGCATTTCTACCCAT 60.107 50.000 10.39 0.00 0.00 4.00
270 271 1.026182 CAGCGCTGCATTTCTACCCA 61.026 55.000 26.68 0.00 0.00 4.51
271 272 0.744414 TCAGCGCTGCATTTCTACCC 60.744 55.000 32.44 0.00 0.00 3.69
272 273 1.262683 GATCAGCGCTGCATTTCTACC 59.737 52.381 32.44 0.00 0.00 3.18
273 274 1.262683 GGATCAGCGCTGCATTTCTAC 59.737 52.381 32.44 14.98 0.00 2.59
274 275 1.586422 GGATCAGCGCTGCATTTCTA 58.414 50.000 32.44 14.05 0.00 2.10
275 276 1.099879 GGGATCAGCGCTGCATTTCT 61.100 55.000 32.44 11.84 0.00 2.52
276 277 1.358046 GGGATCAGCGCTGCATTTC 59.642 57.895 32.44 22.79 0.00 2.17
277 278 2.475466 CGGGATCAGCGCTGCATTT 61.475 57.895 32.44 16.35 0.00 2.32
278 279 2.898840 CGGGATCAGCGCTGCATT 60.899 61.111 32.44 18.94 0.00 3.56
301 302 3.927163 CTCGGTCGGTTGGTTCCCG 62.927 68.421 0.00 0.00 46.83 5.14
302 303 2.047560 CTCGGTCGGTTGGTTCCC 60.048 66.667 0.00 0.00 0.00 3.97
303 304 2.726822 AAGCTCGGTCGGTTGGTTCC 62.727 60.000 0.00 0.00 0.00 3.62
304 305 1.301479 AAGCTCGGTCGGTTGGTTC 60.301 57.895 0.00 0.00 0.00 3.62
305 306 1.597027 CAAGCTCGGTCGGTTGGTT 60.597 57.895 0.00 0.00 38.39 3.67
306 307 2.030562 CAAGCTCGGTCGGTTGGT 59.969 61.111 0.00 0.00 38.39 3.67
308 309 3.423154 GCCAAGCTCGGTCGGTTG 61.423 66.667 0.00 0.00 40.91 3.77
309 310 4.699522 GGCCAAGCTCGGTCGGTT 62.700 66.667 0.00 0.00 0.00 4.44
311 312 4.394712 AAGGCCAAGCTCGGTCGG 62.395 66.667 5.01 0.00 35.10 4.79
312 313 3.121030 CAAGGCCAAGCTCGGTCG 61.121 66.667 5.01 0.00 35.10 4.79
313 314 2.747855 CCAAGGCCAAGCTCGGTC 60.748 66.667 5.01 0.00 0.00 4.79
314 315 4.351054 CCCAAGGCCAAGCTCGGT 62.351 66.667 5.01 0.00 0.00 4.69
315 316 4.351054 ACCCAAGGCCAAGCTCGG 62.351 66.667 5.01 0.00 0.00 4.63
316 317 3.058160 CACCCAAGGCCAAGCTCG 61.058 66.667 5.01 0.00 0.00 5.03
317 318 2.677875 CCACCCAAGGCCAAGCTC 60.678 66.667 5.01 0.00 0.00 4.09
318 319 3.185203 TCCACCCAAGGCCAAGCT 61.185 61.111 5.01 0.00 0.00 3.74
319 320 2.991540 GTCCACCCAAGGCCAAGC 60.992 66.667 5.01 0.00 0.00 4.01
320 321 2.672996 CGTCCACCCAAGGCCAAG 60.673 66.667 5.01 0.00 0.00 3.61
321 322 2.285889 TTTCGTCCACCCAAGGCCAA 62.286 55.000 5.01 0.00 0.00 4.52
322 323 2.285889 TTTTCGTCCACCCAAGGCCA 62.286 55.000 5.01 0.00 0.00 5.36
323 324 1.110518 TTTTTCGTCCACCCAAGGCC 61.111 55.000 0.00 0.00 0.00 5.19
324 325 0.031585 GTTTTTCGTCCACCCAAGGC 59.968 55.000 0.00 0.00 0.00 4.35
325 326 0.309612 CGTTTTTCGTCCACCCAAGG 59.690 55.000 0.00 0.00 34.52 3.61
326 327 1.003223 GTCGTTTTTCGTCCACCCAAG 60.003 52.381 0.00 0.00 40.80 3.61
327 328 1.015868 GTCGTTTTTCGTCCACCCAA 58.984 50.000 0.00 0.00 40.80 4.12
328 329 0.178533 AGTCGTTTTTCGTCCACCCA 59.821 50.000 0.00 0.00 40.80 4.51
329 330 0.863799 GAGTCGTTTTTCGTCCACCC 59.136 55.000 0.00 0.00 40.80 4.61
330 331 0.505655 CGAGTCGTTTTTCGTCCACC 59.494 55.000 3.82 0.00 40.80 4.61
331 332 0.111398 GCGAGTCGTTTTTCGTCCAC 60.111 55.000 15.08 0.00 38.96 4.02
332 333 0.249155 AGCGAGTCGTTTTTCGTCCA 60.249 50.000 15.08 0.00 38.96 4.02
333 334 0.433871 GAGCGAGTCGTTTTTCGTCC 59.566 55.000 15.08 0.00 38.96 4.79
334 335 1.126079 TGAGCGAGTCGTTTTTCGTC 58.874 50.000 15.08 0.00 38.96 4.20
335 336 1.521423 CTTGAGCGAGTCGTTTTTCGT 59.479 47.619 15.08 0.00 38.96 3.85
336 337 1.784856 TCTTGAGCGAGTCGTTTTTCG 59.215 47.619 15.08 0.00 39.69 3.46
337 338 2.410389 GCTCTTGAGCGAGTCGTTTTTC 60.410 50.000 15.08 7.81 33.55 2.29
338 339 1.527311 GCTCTTGAGCGAGTCGTTTTT 59.473 47.619 15.08 0.00 33.55 1.94
339 340 1.140816 GCTCTTGAGCGAGTCGTTTT 58.859 50.000 15.08 0.00 33.55 2.43
340 341 0.667792 GGCTCTTGAGCGAGTCGTTT 60.668 55.000 15.08 2.65 35.24 3.60
341 342 1.080434 GGCTCTTGAGCGAGTCGTT 60.080 57.895 15.08 8.27 35.24 3.85
342 343 1.599606 ATGGCTCTTGAGCGAGTCGT 61.600 55.000 15.08 0.47 38.46 4.34
343 344 1.140589 ATGGCTCTTGAGCGAGTCG 59.859 57.895 8.54 8.54 38.46 4.18
344 345 1.427592 GCATGGCTCTTGAGCGAGTC 61.428 60.000 15.30 5.19 36.21 3.36
345 346 1.449246 GCATGGCTCTTGAGCGAGT 60.449 57.895 15.30 2.54 35.24 4.18
346 347 3.407657 GCATGGCTCTTGAGCGAG 58.592 61.111 15.30 9.20 35.24 5.03
349 350 0.585357 CATACGCATGGCTCTTGAGC 59.415 55.000 13.69 13.69 0.00 4.26
350 351 1.224075 CCATACGCATGGCTCTTGAG 58.776 55.000 0.63 0.00 45.29 3.02
351 352 3.384816 CCATACGCATGGCTCTTGA 57.615 52.632 0.63 0.00 45.29 3.02
359 360 2.203001 TCGGCCACCATACGCATG 60.203 61.111 2.24 0.00 0.00 4.06
360 361 2.108976 CTCGGCCACCATACGCAT 59.891 61.111 2.24 0.00 0.00 4.73
361 362 3.387091 ACTCGGCCACCATACGCA 61.387 61.111 2.24 0.00 0.00 5.24
362 363 2.890474 CACTCGGCCACCATACGC 60.890 66.667 2.24 0.00 0.00 4.42
363 364 1.518572 GACACTCGGCCACCATACG 60.519 63.158 2.24 0.00 0.00 3.06
364 365 0.460284 CAGACACTCGGCCACCATAC 60.460 60.000 2.24 0.00 0.00 2.39
365 366 0.902984 ACAGACACTCGGCCACCATA 60.903 55.000 2.24 0.00 0.00 2.74
366 367 2.172483 GACAGACACTCGGCCACCAT 62.172 60.000 2.24 0.00 0.00 3.55
367 368 2.842462 ACAGACACTCGGCCACCA 60.842 61.111 2.24 0.00 0.00 4.17
368 369 2.048127 GACAGACACTCGGCCACC 60.048 66.667 2.24 0.00 0.00 4.61
369 370 0.946221 CAAGACAGACACTCGGCCAC 60.946 60.000 2.24 0.00 0.00 5.01
370 371 1.367471 CAAGACAGACACTCGGCCA 59.633 57.895 2.24 0.00 0.00 5.36
371 372 1.374758 CCAAGACAGACACTCGGCC 60.375 63.158 0.00 0.00 0.00 6.13
372 373 0.033504 TTCCAAGACAGACACTCGGC 59.966 55.000 0.00 0.00 0.00 5.54
373 374 1.068588 TGTTCCAAGACAGACACTCGG 59.931 52.381 0.00 0.00 0.00 4.63
374 375 2.509052 TGTTCCAAGACAGACACTCG 57.491 50.000 0.00 0.00 0.00 4.18
375 376 5.560966 TTTTTGTTCCAAGACAGACACTC 57.439 39.130 0.00 0.00 0.00 3.51
394 395 2.163412 TCAGTTTGTGCAGCTCGTTTTT 59.837 40.909 0.00 0.00 0.00 1.94
395 396 1.742831 TCAGTTTGTGCAGCTCGTTTT 59.257 42.857 0.00 0.00 0.00 2.43
396 397 1.064060 GTCAGTTTGTGCAGCTCGTTT 59.936 47.619 0.00 0.00 0.00 3.60
397 398 0.657840 GTCAGTTTGTGCAGCTCGTT 59.342 50.000 0.00 0.00 0.00 3.85
398 399 0.461870 TGTCAGTTTGTGCAGCTCGT 60.462 50.000 0.00 0.00 0.00 4.18
399 400 0.657312 TTGTCAGTTTGTGCAGCTCG 59.343 50.000 0.00 0.00 0.00 5.03
400 401 1.002033 CCTTGTCAGTTTGTGCAGCTC 60.002 52.381 0.00 0.00 0.00 4.09
401 402 1.027357 CCTTGTCAGTTTGTGCAGCT 58.973 50.000 0.00 0.00 0.00 4.24
402 403 0.031178 CCCTTGTCAGTTTGTGCAGC 59.969 55.000 0.00 0.00 0.00 5.25
403 404 1.066002 CACCCTTGTCAGTTTGTGCAG 59.934 52.381 0.00 0.00 0.00 4.41
404 405 1.102154 CACCCTTGTCAGTTTGTGCA 58.898 50.000 0.00 0.00 0.00 4.57
405 406 1.334869 CTCACCCTTGTCAGTTTGTGC 59.665 52.381 0.00 0.00 0.00 4.57
406 407 1.949525 CCTCACCCTTGTCAGTTTGTG 59.050 52.381 0.00 0.00 0.00 3.33
407 408 1.843851 TCCTCACCCTTGTCAGTTTGT 59.156 47.619 0.00 0.00 0.00 2.83
408 409 2.222027 GTCCTCACCCTTGTCAGTTTG 58.778 52.381 0.00 0.00 0.00 2.93
409 410 1.843851 TGTCCTCACCCTTGTCAGTTT 59.156 47.619 0.00 0.00 0.00 2.66
410 411 1.507140 TGTCCTCACCCTTGTCAGTT 58.493 50.000 0.00 0.00 0.00 3.16
411 412 1.507140 TTGTCCTCACCCTTGTCAGT 58.493 50.000 0.00 0.00 0.00 3.41
412 413 2.498167 CTTTGTCCTCACCCTTGTCAG 58.502 52.381 0.00 0.00 0.00 3.51
413 414 1.476833 GCTTTGTCCTCACCCTTGTCA 60.477 52.381 0.00 0.00 0.00 3.58
414 415 1.202818 AGCTTTGTCCTCACCCTTGTC 60.203 52.381 0.00 0.00 0.00 3.18
415 416 0.846693 AGCTTTGTCCTCACCCTTGT 59.153 50.000 0.00 0.00 0.00 3.16
416 417 2.704572 CTAGCTTTGTCCTCACCCTTG 58.295 52.381 0.00 0.00 0.00 3.61
417 418 1.003696 GCTAGCTTTGTCCTCACCCTT 59.996 52.381 7.70 0.00 0.00 3.95
418 419 0.615850 GCTAGCTTTGTCCTCACCCT 59.384 55.000 7.70 0.00 0.00 4.34
419 420 0.393132 GGCTAGCTTTGTCCTCACCC 60.393 60.000 15.72 0.00 0.00 4.61
420 421 0.324943 TGGCTAGCTTTGTCCTCACC 59.675 55.000 15.72 0.00 0.00 4.02
421 422 2.012673 CATGGCTAGCTTTGTCCTCAC 58.987 52.381 15.72 0.00 0.00 3.51
422 423 1.908619 TCATGGCTAGCTTTGTCCTCA 59.091 47.619 15.72 1.24 0.00 3.86
423 424 2.559440 CTCATGGCTAGCTTTGTCCTC 58.441 52.381 15.72 0.00 0.00 3.71
424 425 1.211457 CCTCATGGCTAGCTTTGTCCT 59.789 52.381 15.72 0.00 0.00 3.85
425 426 1.065126 ACCTCATGGCTAGCTTTGTCC 60.065 52.381 15.72 0.00 36.63 4.02
426 427 2.284190 GACCTCATGGCTAGCTTTGTC 58.716 52.381 15.72 9.21 36.63 3.18
427 428 1.406069 CGACCTCATGGCTAGCTTTGT 60.406 52.381 15.72 3.76 36.63 2.83
428 429 1.293924 CGACCTCATGGCTAGCTTTG 58.706 55.000 15.72 12.43 36.63 2.77
429 430 0.905357 ACGACCTCATGGCTAGCTTT 59.095 50.000 15.72 0.00 36.63 3.51
430 431 0.461961 GACGACCTCATGGCTAGCTT 59.538 55.000 15.72 0.00 36.63 3.74
431 432 1.395826 GGACGACCTCATGGCTAGCT 61.396 60.000 15.72 0.00 36.63 3.32
432 433 1.068250 GGACGACCTCATGGCTAGC 59.932 63.158 6.04 6.04 36.63 3.42
433 434 0.387202 CTGGACGACCTCATGGCTAG 59.613 60.000 5.33 0.00 36.63 3.42
434 435 1.676678 GCTGGACGACCTCATGGCTA 61.677 60.000 5.33 0.00 36.63 3.93
435 436 3.023949 GCTGGACGACCTCATGGCT 62.024 63.158 5.33 0.00 36.63 4.75
436 437 2.512515 GCTGGACGACCTCATGGC 60.513 66.667 5.33 0.00 36.63 4.40
437 438 2.187946 GGCTGGACGACCTCATGG 59.812 66.667 5.33 0.00 37.04 3.66
438 439 2.187946 GGGCTGGACGACCTCATG 59.812 66.667 5.33 0.00 38.04 3.07
439 440 3.083997 GGGGCTGGACGACCTCAT 61.084 66.667 5.33 0.00 42.26 2.90
440 441 4.631740 TGGGGCTGGACGACCTCA 62.632 66.667 5.33 0.00 42.26 3.86
441 442 3.775654 CTGGGGCTGGACGACCTC 61.776 72.222 5.33 0.00 42.26 3.85
453 454 3.190738 TTTGTGTCTCCGGCTGGGG 62.191 63.158 12.87 8.98 36.91 4.96
454 455 1.966451 GTTTGTGTCTCCGGCTGGG 60.966 63.158 12.87 2.35 35.24 4.45
455 456 1.966451 GGTTTGTGTCTCCGGCTGG 60.966 63.158 4.71 4.71 0.00 4.85
456 457 2.317609 CGGTTTGTGTCTCCGGCTG 61.318 63.158 0.00 0.00 40.49 4.85
457 458 2.030562 CGGTTTGTGTCTCCGGCT 59.969 61.111 0.00 0.00 40.49 5.52
460 461 2.280524 TGCCGGTTTGTGTCTCCG 60.281 61.111 1.90 0.00 43.30 4.63
461 462 1.966451 CCTGCCGGTTTGTGTCTCC 60.966 63.158 1.90 0.00 0.00 3.71
462 463 1.227853 ACCTGCCGGTTTGTGTCTC 60.228 57.895 1.90 0.00 42.13 3.36
463 464 1.227853 GACCTGCCGGTTTGTGTCT 60.228 57.895 1.90 0.00 45.73 3.41
464 465 1.098712 TTGACCTGCCGGTTTGTGTC 61.099 55.000 1.90 4.09 45.73 3.67
465 466 1.077357 TTGACCTGCCGGTTTGTGT 60.077 52.632 1.90 0.00 45.73 3.72
466 467 1.358759 GTTGACCTGCCGGTTTGTG 59.641 57.895 1.90 0.00 45.73 3.33
467 468 2.184167 CGTTGACCTGCCGGTTTGT 61.184 57.895 1.90 0.00 45.73 2.83
468 469 2.113131 GACGTTGACCTGCCGGTTTG 62.113 60.000 1.90 0.00 45.73 2.93
469 470 1.890510 GACGTTGACCTGCCGGTTT 60.891 57.895 1.90 0.00 45.73 3.27
470 471 2.280592 GACGTTGACCTGCCGGTT 60.281 61.111 1.90 0.00 45.73 4.44
472 473 4.308458 TGGACGTTGACCTGCCGG 62.308 66.667 0.00 0.00 0.00 6.13
473 474 3.041940 GTGGACGTTGACCTGCCG 61.042 66.667 0.00 0.00 0.00 5.69
474 475 3.041940 CGTGGACGTTGACCTGCC 61.042 66.667 0.00 0.00 34.11 4.85
475 476 3.712881 GCGTGGACGTTGACCTGC 61.713 66.667 0.52 0.00 42.22 4.85
476 477 3.041940 GGCGTGGACGTTGACCTG 61.042 66.667 0.52 0.00 42.22 4.00
477 478 4.309950 GGGCGTGGACGTTGACCT 62.310 66.667 0.52 0.00 42.22 3.85
478 479 4.309950 AGGGCGTGGACGTTGACC 62.310 66.667 0.52 0.00 42.22 4.02
479 480 2.737376 GAGGGCGTGGACGTTGAC 60.737 66.667 0.52 0.00 42.22 3.18
480 481 3.998672 GGAGGGCGTGGACGTTGA 61.999 66.667 0.52 0.00 42.22 3.18
481 482 4.308458 TGGAGGGCGTGGACGTTG 62.308 66.667 0.52 0.00 42.22 4.10
482 483 4.309950 GTGGAGGGCGTGGACGTT 62.310 66.667 0.52 0.00 42.22 3.99
484 485 4.742201 CTGTGGAGGGCGTGGACG 62.742 72.222 0.00 0.00 43.27 4.79
485 486 1.614241 ATACTGTGGAGGGCGTGGAC 61.614 60.000 0.00 0.00 0.00 4.02
486 487 0.907704 AATACTGTGGAGGGCGTGGA 60.908 55.000 0.00 0.00 0.00 4.02
487 488 0.744414 CAATACTGTGGAGGGCGTGG 60.744 60.000 0.00 0.00 0.00 4.94
488 489 0.249120 TCAATACTGTGGAGGGCGTG 59.751 55.000 0.00 0.00 0.00 5.34
489 490 0.981183 TTCAATACTGTGGAGGGCGT 59.019 50.000 0.00 0.00 0.00 5.68
490 491 1.737793 GTTTCAATACTGTGGAGGGCG 59.262 52.381 0.00 0.00 0.00 6.13
491 492 2.790433 TGTTTCAATACTGTGGAGGGC 58.210 47.619 0.00 0.00 0.00 5.19
492 493 8.156820 TGATATATGTTTCAATACTGTGGAGGG 58.843 37.037 0.00 0.00 0.00 4.30
493 494 9.730705 ATGATATATGTTTCAATACTGTGGAGG 57.269 33.333 0.00 0.00 0.00 4.30
498 499 9.950496 GGGAGATGATATATGTTTCAATACTGT 57.050 33.333 0.00 0.00 0.00 3.55
503 504 8.888419 AGTGAGGGAGATGATATATGTTTCAAT 58.112 33.333 0.00 0.00 0.00 2.57
504 505 8.152898 CAGTGAGGGAGATGATATATGTTTCAA 58.847 37.037 0.00 0.00 0.00 2.69
505 506 7.510343 TCAGTGAGGGAGATGATATATGTTTCA 59.490 37.037 0.00 0.00 0.00 2.69
506 507 7.816995 GTCAGTGAGGGAGATGATATATGTTTC 59.183 40.741 0.00 0.00 0.00 2.78
507 508 7.524532 CGTCAGTGAGGGAGATGATATATGTTT 60.525 40.741 4.87 0.00 0.00 2.83
508 509 6.071672 CGTCAGTGAGGGAGATGATATATGTT 60.072 42.308 4.87 0.00 0.00 2.71
509 510 5.417266 CGTCAGTGAGGGAGATGATATATGT 59.583 44.000 4.87 0.00 0.00 2.29
510 511 5.678361 GCGTCAGTGAGGGAGATGATATATG 60.678 48.000 14.33 0.00 0.00 1.78
511 512 4.400884 GCGTCAGTGAGGGAGATGATATAT 59.599 45.833 14.33 0.00 0.00 0.86
512 513 3.759086 GCGTCAGTGAGGGAGATGATATA 59.241 47.826 14.33 0.00 0.00 0.86
563 564 4.478206 TCTCATCCAAAGTCCAGACATC 57.522 45.455 0.00 0.00 0.00 3.06
564 565 4.472470 TCATCTCATCCAAAGTCCAGACAT 59.528 41.667 0.00 0.00 0.00 3.06
568 569 4.387598 GGATCATCTCATCCAAAGTCCAG 58.612 47.826 0.00 0.00 42.02 3.86
635 636 0.029267 AAGAGCATGAGGGAGGGGAT 60.029 55.000 0.00 0.00 0.00 3.85
636 637 0.692419 GAAGAGCATGAGGGAGGGGA 60.692 60.000 0.00 0.00 0.00 4.81
637 638 0.984961 TGAAGAGCATGAGGGAGGGG 60.985 60.000 0.00 0.00 0.00 4.79
638 639 1.138568 ATGAAGAGCATGAGGGAGGG 58.861 55.000 0.00 0.00 35.42 4.30
639 640 2.438763 AGAATGAAGAGCATGAGGGAGG 59.561 50.000 0.00 0.00 37.28 4.30
640 641 3.118334 ACAGAATGAAGAGCATGAGGGAG 60.118 47.826 0.00 0.00 39.69 4.30
641 642 2.842496 ACAGAATGAAGAGCATGAGGGA 59.158 45.455 0.00 0.00 39.69 4.20
642 643 3.278668 ACAGAATGAAGAGCATGAGGG 57.721 47.619 0.00 0.00 39.69 4.30
643 644 4.333095 CAGAACAGAATGAAGAGCATGAGG 59.667 45.833 0.00 0.00 39.69 3.86
644 645 4.333095 CCAGAACAGAATGAAGAGCATGAG 59.667 45.833 0.00 0.00 39.69 2.90
645 646 4.019950 TCCAGAACAGAATGAAGAGCATGA 60.020 41.667 0.00 0.00 39.69 3.07
646 647 4.259356 TCCAGAACAGAATGAAGAGCATG 58.741 43.478 0.00 0.00 39.69 4.06
647 648 4.564782 TCCAGAACAGAATGAAGAGCAT 57.435 40.909 0.00 0.00 39.69 3.79
648 649 4.259356 CATCCAGAACAGAATGAAGAGCA 58.741 43.478 0.00 0.00 39.69 4.26
649 650 3.626670 CCATCCAGAACAGAATGAAGAGC 59.373 47.826 0.00 0.00 39.69 4.09
650 651 4.841422 ACCATCCAGAACAGAATGAAGAG 58.159 43.478 0.00 0.00 39.69 2.85
651 652 4.323792 GGACCATCCAGAACAGAATGAAGA 60.324 45.833 0.00 0.00 36.44 2.87
652 653 3.944015 GGACCATCCAGAACAGAATGAAG 59.056 47.826 0.00 0.00 36.44 3.02
653 654 3.330405 TGGACCATCCAGAACAGAATGAA 59.670 43.478 0.00 0.00 42.67 2.57
654 655 2.912295 TGGACCATCCAGAACAGAATGA 59.088 45.455 0.00 0.00 42.67 2.57
655 656 3.354948 TGGACCATCCAGAACAGAATG 57.645 47.619 0.00 0.00 42.67 2.67
665 666 1.873270 CGACGACACTGGACCATCCA 61.873 60.000 0.00 0.00 45.98 3.41
666 667 1.153823 CGACGACACTGGACCATCC 60.154 63.158 0.00 0.00 36.96 3.51
667 668 0.456312 GACGACGACACTGGACCATC 60.456 60.000 0.00 0.00 0.00 3.51
668 669 1.585006 GACGACGACACTGGACCAT 59.415 57.895 0.00 0.00 0.00 3.55
669 670 2.558286 GGACGACGACACTGGACCA 61.558 63.158 0.00 0.00 0.00 4.02
670 671 2.197643 GAGGACGACGACACTGGACC 62.198 65.000 0.00 0.00 0.00 4.46
757 763 1.347707 TGGTGCGAACAGAAGAGGATT 59.652 47.619 0.00 0.00 0.00 3.01
797 808 3.795623 AGCCAAGATGCAAGCAAATAG 57.204 42.857 0.00 0.00 0.00 1.73
831 3169 1.337447 TGCGTTTACCCTACTCACTGC 60.337 52.381 0.00 0.00 0.00 4.40
840 3178 0.821711 TTTGCTGCTGCGTTTACCCT 60.822 50.000 11.21 0.00 43.34 4.34
841 3179 0.243636 ATTTGCTGCTGCGTTTACCC 59.756 50.000 11.21 0.00 43.34 3.69
842 3180 2.064573 AATTTGCTGCTGCGTTTACC 57.935 45.000 11.21 0.00 43.34 2.85
872 3210 2.478200 GCTCCGAGTAAAAGGACGAGAG 60.478 54.545 0.00 0.00 32.33 3.20
1170 3528 1.088340 CCAGTTGGCTGAGCATCTCG 61.088 60.000 6.82 0.00 45.28 4.04
1377 3735 1.663135 GCGAACTCTCTGAAGATTGCC 59.337 52.381 0.00 0.00 0.00 4.52
1411 3769 4.610333 TCATTCAGGCCAGTACTAGAAGA 58.390 43.478 5.01 0.00 0.00 2.87
1414 3772 3.954904 GTCTCATTCAGGCCAGTACTAGA 59.045 47.826 5.01 0.00 0.00 2.43
1415 3773 3.243234 CGTCTCATTCAGGCCAGTACTAG 60.243 52.174 5.01 0.00 0.00 2.57
1416 3774 2.688446 CGTCTCATTCAGGCCAGTACTA 59.312 50.000 5.01 0.00 0.00 1.82
1423 3781 0.532573 TGTCTCGTCTCATTCAGGCC 59.467 55.000 0.00 0.00 0.00 5.19
1437 3795 4.096532 TCGTTCTCATCCATACTGTGTCTC 59.903 45.833 0.00 0.00 0.00 3.36
1441 3799 4.097135 ACTCTCGTTCTCATCCATACTGTG 59.903 45.833 0.00 0.00 0.00 3.66
1465 3823 1.374631 TCAGTCTTCTTGCGCGCAT 60.375 52.632 36.83 15.94 0.00 4.73
1491 3849 0.389426 CGACGTCGTCCCCAAAATCT 60.389 55.000 29.08 0.00 34.11 2.40
1863 4221 2.821991 GGACCATATCCCAGTCTTCG 57.178 55.000 0.00 0.00 42.46 3.79
1922 4280 2.057316 CTGAGTTGCGAGTTGTCAGAG 58.943 52.381 0.00 0.00 37.43 3.35
1962 4320 5.332743 ACCTCCTGGATTATTTTTCTTGCA 58.667 37.500 0.00 0.00 37.04 4.08
2050 4408 3.046968 CAGATCATCTCTGCCATGGAG 57.953 52.381 18.40 10.38 44.73 3.86
2096 4454 4.162131 AGCCATTACCTTTTAATGCAAGGG 59.838 41.667 6.35 0.00 44.70 3.95
2097 4455 5.343307 AGCCATTACCTTTTAATGCAAGG 57.657 39.130 0.00 0.00 45.74 3.61
2110 4468 0.457443 GCAAGAGGCAAGCCATTACC 59.543 55.000 14.40 0.00 43.97 2.85
2200 4558 5.163622 CGTTCTTCATTGCATCCCAGTTTAT 60.164 40.000 0.00 0.00 0.00 1.40
2211 4569 1.071542 TCACCCTCGTTCTTCATTGCA 59.928 47.619 0.00 0.00 0.00 4.08
2223 4581 1.142748 GGCTCTGATGTCACCCTCG 59.857 63.158 0.00 0.00 0.00 4.63
2285 4643 5.764487 TGATGTGATGTACAAAAAGCACA 57.236 34.783 15.92 15.92 43.77 4.57
2384 4742 0.984230 TTCTTCAAGGGAGCGTCCAT 59.016 50.000 6.41 0.00 38.64 3.41
2622 4980 1.134521 ACCTTCACGCAAACAGAGTCA 60.135 47.619 0.00 0.00 0.00 3.41
2740 5098 6.239543 CCTCTCATGCCATCAAAGTAGAGTAT 60.240 42.308 0.00 0.00 0.00 2.12
2851 5209 4.866508 AGTTTGTGAGATTACTGACGGA 57.133 40.909 0.00 0.00 33.11 4.69
2934 5292 2.407090 TGAACATGCTTCAGTGTCGAG 58.593 47.619 6.62 0.00 0.00 4.04
2952 5310 5.241728 CCATGACTCGACCTTGTAGATATGA 59.758 44.000 0.00 0.00 0.00 2.15
2991 5349 1.951209 TCAGGTTGCTCTGGATGGTA 58.049 50.000 0.00 0.00 35.58 3.25
2997 5355 1.622811 AGAGACTTCAGGTTGCTCTGG 59.377 52.381 0.00 0.00 34.85 3.86
3027 5385 4.603535 GGGTGTTGGCTGCCAGGT 62.604 66.667 22.17 0.00 33.81 4.00
3082 5440 0.895559 CAAAGCACCAGGAGGGGTTC 60.896 60.000 0.00 0.00 41.86 3.62
3232 5590 5.993055 TCATCATTCAGCAGATTAGGACAA 58.007 37.500 0.00 0.00 0.00 3.18
3268 5626 1.065126 GTCAGCCAGCTCCCAAGTAAT 60.065 52.381 0.00 0.00 0.00 1.89
3269 5627 0.324943 GTCAGCCAGCTCCCAAGTAA 59.675 55.000 0.00 0.00 0.00 2.24
3270 5628 1.888436 CGTCAGCCAGCTCCCAAGTA 61.888 60.000 0.00 0.00 0.00 2.24
3435 5793 3.005367 GCAGAGAGTTAGTATCCTGAGCC 59.995 52.174 0.00 0.00 0.00 4.70
3476 5834 2.233271 CTGCAATCCTTGTGGAAGTGT 58.767 47.619 0.00 0.00 46.80 3.55
3499 5857 5.808366 TCAGCTTCTTAAGTTCCTTCAGA 57.192 39.130 1.63 0.00 0.00 3.27
3700 6058 4.385146 GTGAAACGAGTTAAGTACCAGCTC 59.615 45.833 0.00 0.00 0.00 4.09
3716 6078 6.533819 TGTGTATTTAACTCAGGTGAAACG 57.466 37.500 0.00 0.00 38.12 3.60
3750 6116 9.799106 ATTTCTGTCCTCTCTCTTGAAATTTAA 57.201 29.630 0.00 0.00 31.31 1.52
3761 6127 4.425520 CACCGTTATTTCTGTCCTCTCTC 58.574 47.826 0.00 0.00 0.00 3.20
3783 6149 0.250338 ACTTTGAGGTTCTCCGTGCC 60.250 55.000 0.00 0.00 39.05 5.01
3787 6153 2.985139 GTCGTTACTTTGAGGTTCTCCG 59.015 50.000 0.00 0.00 39.05 4.63
3791 6157 3.391049 AGCTGTCGTTACTTTGAGGTTC 58.609 45.455 0.00 0.00 0.00 3.62
3806 6173 6.609237 TTGCATCAGTGAATTATAGCTGTC 57.391 37.500 0.00 0.00 0.00 3.51
3861 6391 6.096141 TCAGAATTAAAACAGTGGTGCTTTGA 59.904 34.615 0.00 0.00 0.00 2.69
3862 6392 6.272318 TCAGAATTAAAACAGTGGTGCTTTG 58.728 36.000 0.00 0.00 0.00 2.77
3879 6412 9.778741 TTAGTCATAAGTGTTCACTTCAGAATT 57.221 29.630 19.37 12.74 0.00 2.17
3921 6454 1.483827 CATACTTGCTGCAGGAGAGGA 59.516 52.381 19.16 10.11 0.00 3.71
4005 6555 1.705997 ATATCCGTTCCACCAGGCCC 61.706 60.000 0.00 0.00 33.74 5.80
4006 6556 0.250338 GATATCCGTTCCACCAGGCC 60.250 60.000 0.00 0.00 33.74 5.19
4007 6557 0.759346 AGATATCCGTTCCACCAGGC 59.241 55.000 0.00 0.00 33.74 4.85
4008 6558 2.545952 CGAAGATATCCGTTCCACCAGG 60.546 54.545 0.00 0.00 0.00 4.45
4009 6559 2.361119 TCGAAGATATCCGTTCCACCAG 59.639 50.000 0.00 0.00 0.00 4.00
4010 6560 2.380941 TCGAAGATATCCGTTCCACCA 58.619 47.619 0.00 0.00 0.00 4.17
4018 6568 4.928601 TGTACACCTTTCGAAGATATCCG 58.071 43.478 0.00 0.00 35.04 4.18
4044 6594 1.134848 GGTCAGTAGCTTGCAGGAGAG 60.135 57.143 0.00 0.00 0.00 3.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.