Multiple sequence alignment - TraesCS5D01G266100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G266100 chr5D 100.000 4313 0 0 1 4313 370454053 370449741 0.000000e+00 7965
1 TraesCS5D01G266100 chr5A 97.994 3390 50 5 928 4313 472920967 472917592 0.000000e+00 5867
2 TraesCS5D01G266100 chr5A 90.486 473 38 6 345 812 243180707 243180237 6.130000e-173 617
3 TraesCS5D01G266100 chr5A 89.641 473 42 5 345 812 262752982 262753452 2.870000e-166 595
4 TraesCS5D01G266100 chr5A 88.795 473 46 6 345 812 262874408 262874878 1.350000e-159 573
5 TraesCS5D01G266100 chr5A 93.137 102 7 0 816 917 472990053 472989952 2.690000e-32 150
6 TraesCS5D01G266100 chr2B 96.837 2276 62 7 1051 3319 143824839 143822567 0.000000e+00 3795
7 TraesCS5D01G266100 chr2D 96.435 2272 72 2 1051 3319 90818804 90816539 0.000000e+00 3738
8 TraesCS5D01G266100 chr2D 89.263 475 42 8 345 813 297283058 297283529 1.730000e-163 586
9 TraesCS5D01G266100 chr2D 89.293 467 44 4 351 812 413346564 413347029 8.040000e-162 580
10 TraesCS5D01G266100 chr2D 90.263 380 26 8 1 377 280498195 280497824 1.800000e-133 486
11 TraesCS5D01G266100 chr2A 97.342 1919 51 0 1401 3319 90578064 90576146 0.000000e+00 3262
12 TraesCS5D01G266100 chr5B 83.648 795 87 21 43 812 280652818 280652042 0.000000e+00 708
13 TraesCS5D01G266100 chr6D 90.405 469 36 8 345 808 204194719 204194255 3.690000e-170 608
14 TraesCS5D01G266100 chr6D 89.362 470 41 8 348 812 204187344 204186879 2.240000e-162 582
15 TraesCS5D01G266100 chr6D 89.823 452 38 7 365 812 162044484 162044931 1.350000e-159 573
16 TraesCS5D01G266100 chr6D 88.391 379 35 8 1 376 205751511 205751139 8.510000e-122 448
17 TraesCS5D01G266100 chr7D 89.384 471 42 6 348 812 332130916 332130448 1.730000e-163 586
18 TraesCS5D01G266100 chr7D 88.235 357 30 10 1 351 356610515 356610865 2.400000e-112 416
19 TraesCS5D01G266100 chr1D 91.316 380 25 5 1 377 179365452 179365078 2.970000e-141 512
20 TraesCS5D01G266100 chr1D 92.698 315 14 5 1 312 144037402 144037710 3.060000e-121 446
21 TraesCS5D01G266100 chr1D 89.736 341 26 6 1 333 181149232 181149571 1.110000e-115 427
22 TraesCS5D01G266100 chr3A 82.524 618 55 25 43 628 691575906 691576502 1.080000e-135 494
23 TraesCS5D01G266100 chr3D 86.494 385 32 15 1 377 408693312 408693684 5.190000e-109 405
24 TraesCS5D01G266100 chr6B 96.585 205 7 0 4096 4300 317753525 317753321 1.490000e-89 340
25 TraesCS5D01G266100 chr6B 96.098 205 7 1 4096 4300 455142312 455142515 2.490000e-87 333
26 TraesCS5D01G266100 chr3B 95.283 212 8 2 4091 4300 696947882 696948093 6.910000e-88 335
27 TraesCS5D01G266100 chr7B 79.793 193 24 8 187 374 195545259 195545441 4.530000e-25 126


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G266100 chr5D 370449741 370454053 4312 True 7965 7965 100.000 1 4313 1 chr5D.!!$R1 4312
1 TraesCS5D01G266100 chr5A 472917592 472920967 3375 True 5867 5867 97.994 928 4313 1 chr5A.!!$R2 3385
2 TraesCS5D01G266100 chr2B 143822567 143824839 2272 True 3795 3795 96.837 1051 3319 1 chr2B.!!$R1 2268
3 TraesCS5D01G266100 chr2D 90816539 90818804 2265 True 3738 3738 96.435 1051 3319 1 chr2D.!!$R1 2268
4 TraesCS5D01G266100 chr2A 90576146 90578064 1918 True 3262 3262 97.342 1401 3319 1 chr2A.!!$R1 1918
5 TraesCS5D01G266100 chr5B 280652042 280652818 776 True 708 708 83.648 43 812 1 chr5B.!!$R1 769
6 TraesCS5D01G266100 chr3A 691575906 691576502 596 False 494 494 82.524 43 628 1 chr3A.!!$F1 585

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
774 781 0.028902 GTGTCACTTGCCAAACGGAC 59.971 55.0 0.00 0.00 0.00 4.79 F
883 890 0.029834 GAATAGTCGCGCGGAACCTA 59.970 55.0 31.69 22.76 0.00 3.08 F
885 892 0.240411 ATAGTCGCGCGGAACCTATC 59.760 55.0 31.69 10.04 0.00 2.08 F
891 898 0.318784 GCGCGGAACCTATCCTGTAG 60.319 60.0 8.83 0.00 46.98 2.74 F
902 909 0.733729 ATCCTGTAGACGTGTCTCGC 59.266 55.0 5.66 2.02 44.19 5.03 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2233 2535 1.206745 GACGCATACACGATCCGGTG 61.207 60.000 0.0 0.0 43.54 4.94 R
2301 2603 4.161001 GCATCCACCATCTCCTTCAAAATT 59.839 41.667 0.0 0.0 0.00 1.82 R
2838 3140 5.075493 GGTATCCATTCAGCCTTCATCATT 58.925 41.667 0.0 0.0 0.00 2.57 R
3187 3489 9.599322 CAGCATATCCTCGTAAACAATAAAATC 57.401 33.333 0.0 0.0 0.00 2.17 R
3693 3995 3.107642 ACTGCCAGTAAGTGTGTGTAC 57.892 47.619 0.0 0.0 0.00 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 5.904362 AAGATACAAGGCAAAGTTCATCC 57.096 39.130 0.00 0.00 0.00 3.51
25 26 4.273318 AGATACAAGGCAAAGTTCATCCC 58.727 43.478 0.00 0.00 0.00 3.85
26 27 2.380064 ACAAGGCAAAGTTCATCCCA 57.620 45.000 0.00 0.00 0.00 4.37
27 28 2.676748 ACAAGGCAAAGTTCATCCCAA 58.323 42.857 0.00 0.00 0.00 4.12
28 29 3.242011 ACAAGGCAAAGTTCATCCCAAT 58.758 40.909 0.00 0.00 0.00 3.16
29 30 3.259123 ACAAGGCAAAGTTCATCCCAATC 59.741 43.478 0.00 0.00 0.00 2.67
30 31 2.460669 AGGCAAAGTTCATCCCAATCC 58.539 47.619 0.00 0.00 0.00 3.01
31 32 2.043526 AGGCAAAGTTCATCCCAATCCT 59.956 45.455 0.00 0.00 0.00 3.24
32 33 2.833943 GGCAAAGTTCATCCCAATCCTT 59.166 45.455 0.00 0.00 0.00 3.36
33 34 3.368739 GGCAAAGTTCATCCCAATCCTTG 60.369 47.826 0.00 0.00 0.00 3.61
62 66 1.978580 GGGGTCTTGATGATATCCCGT 59.021 52.381 0.00 0.00 36.11 5.28
80 84 3.724508 CGTAGGATCTTCTCACATGCT 57.275 47.619 0.00 0.00 0.00 3.79
81 85 3.637432 CGTAGGATCTTCTCACATGCTC 58.363 50.000 0.00 0.00 0.00 4.26
82 86 3.067320 CGTAGGATCTTCTCACATGCTCA 59.933 47.826 0.00 0.00 0.00 4.26
83 87 3.540314 AGGATCTTCTCACATGCTCAC 57.460 47.619 0.00 0.00 0.00 3.51
96 100 0.401356 TGCTCACATGAAGGGCTTGA 59.599 50.000 14.15 0.00 0.00 3.02
97 101 1.202915 TGCTCACATGAAGGGCTTGAA 60.203 47.619 14.15 0.00 0.00 2.69
103 107 2.042162 ACATGAAGGGCTTGAACTCCAT 59.958 45.455 0.00 0.00 0.00 3.41
104 108 2.205022 TGAAGGGCTTGAACTCCATG 57.795 50.000 0.00 0.00 0.00 3.66
122 126 2.810870 TGGGAGTGGTAGTCTCTCTC 57.189 55.000 0.00 0.00 33.93 3.20
123 127 2.280103 TGGGAGTGGTAGTCTCTCTCT 58.720 52.381 0.00 0.00 33.93 3.10
143 147 5.363868 TCTCTCTCTCTCTCAAGAGTAGAGG 59.636 48.000 25.09 19.79 46.73 3.69
195 199 5.163405 TGAGCTATCACTTTGCTAACCCTAG 60.163 44.000 0.00 0.00 37.16 3.02
199 203 6.258947 GCTATCACTTTGCTAACCCTAGAAAG 59.741 42.308 0.00 0.00 33.30 2.62
200 204 5.818678 TCACTTTGCTAACCCTAGAAAGA 57.181 39.130 0.00 0.00 32.44 2.52
201 205 6.182507 TCACTTTGCTAACCCTAGAAAGAA 57.817 37.500 0.00 0.00 32.44 2.52
204 208 5.073280 ACTTTGCTAACCCTAGAAAGAAGGT 59.927 40.000 0.00 0.00 32.44 3.50
226 230 5.481122 GGTGGAGGAGGTCTATTTATAGTCC 59.519 48.000 5.28 5.28 38.39 3.85
228 232 6.553852 GTGGAGGAGGTCTATTTATAGTCCAA 59.446 42.308 13.18 0.00 39.88 3.53
229 233 6.782988 TGGAGGAGGTCTATTTATAGTCCAAG 59.217 42.308 13.18 0.00 39.88 3.61
230 234 7.011382 GGAGGAGGTCTATTTATAGTCCAAGA 58.989 42.308 13.18 0.00 39.88 3.02
265 269 2.124445 GGGGGCGAATGGGTACAC 60.124 66.667 0.00 0.00 0.00 2.90
274 278 3.968837 ATGGGTACACGGGCCTCGA 62.969 63.158 18.74 0.00 42.43 4.04
287 292 1.811266 CCTCGACCCAAGTCATGCG 60.811 63.158 0.00 0.00 43.73 4.73
318 324 2.842936 GGATGATCCGGACGGGGT 60.843 66.667 6.12 0.00 36.01 4.95
329 335 1.749033 GACGGGGTCCCAGATGATC 59.251 63.158 15.84 0.00 35.37 2.92
333 339 2.520536 GGGTCCCAGATGATCCGGG 61.521 68.421 7.45 7.45 41.76 5.73
335 341 3.233980 TCCCAGATGATCCGGGCG 61.234 66.667 8.94 0.00 40.05 6.13
383 390 3.602677 GGATGATCCGGGCGTCGA 61.603 66.667 0.00 0.00 42.43 4.20
384 391 2.049985 GATGATCCGGGCGTCGAG 60.050 66.667 0.00 0.00 42.43 4.04
385 392 3.559657 GATGATCCGGGCGTCGAGG 62.560 68.421 0.00 0.00 42.43 4.63
407 414 2.842936 GGATGATCCGGACGGGGT 60.843 66.667 6.12 0.00 36.01 4.95
450 457 1.469335 AAGCCTTCGGGTGTCTTCGA 61.469 55.000 0.00 0.00 37.45 3.71
451 458 1.737008 GCCTTCGGGTGTCTTCGAC 60.737 63.158 0.00 0.00 37.45 4.20
452 459 1.443872 CCTTCGGGTGTCTTCGACG 60.444 63.158 0.00 0.00 34.95 5.12
453 460 2.049802 TTCGGGTGTCTTCGACGC 60.050 61.111 0.00 0.00 41.69 5.19
455 462 3.103911 CGGGTGTCTTCGACGCAC 61.104 66.667 9.43 4.96 43.87 5.34
465 472 0.179156 TTCGACGCACTTATCCGGAC 60.179 55.000 6.12 0.00 0.00 4.79
479 486 3.547513 GGACGATCCGGGGGAAGG 61.548 72.222 0.00 0.00 34.34 3.46
480 487 2.762875 GACGATCCGGGGGAAGGT 60.763 66.667 0.00 0.00 34.34 3.50
481 488 2.762875 ACGATCCGGGGGAAGGTC 60.763 66.667 0.00 0.00 34.34 3.85
482 489 3.547513 CGATCCGGGGGAAGGTCC 61.548 72.222 0.00 0.00 34.34 4.46
483 490 3.547513 GATCCGGGGGAAGGTCCG 61.548 72.222 0.00 0.00 45.29 4.79
487 494 3.861797 CGGGGGAAGGTCCGGATG 61.862 72.222 7.81 0.00 42.32 3.51
488 495 2.366435 GGGGGAAGGTCCGGATGA 60.366 66.667 7.81 0.00 37.43 2.92
489 496 1.770518 GGGGGAAGGTCCGGATGAT 60.771 63.158 7.81 0.00 37.43 2.45
490 497 1.755384 GGGGAAGGTCCGGATGATC 59.245 63.158 7.81 6.08 37.43 2.92
491 498 1.755384 GGGAAGGTCCGGATGATCC 59.245 63.158 18.95 18.95 37.43 3.36
500 507 4.664677 GGATGATCCGGACGGCGG 62.665 72.222 6.12 0.00 34.68 6.13
501 508 3.912907 GATGATCCGGACGGCGGT 61.913 66.667 6.12 0.00 34.68 5.68
502 509 3.843117 GATGATCCGGACGGCGGTC 62.843 68.421 6.12 15.59 42.66 4.79
510 517 2.202756 GACGGCGGTCCAGATGTC 60.203 66.667 13.24 0.00 37.19 3.06
511 518 3.718210 GACGGCGGTCCAGATGTCC 62.718 68.421 13.24 0.00 37.19 4.02
512 519 4.873129 CGGCGGTCCAGATGTCCG 62.873 72.222 0.00 8.62 45.94 4.79
513 520 3.771160 GGCGGTCCAGATGTCCGT 61.771 66.667 12.72 0.00 45.11 4.69
514 521 2.202756 GCGGTCCAGATGTCCGTC 60.203 66.667 12.72 4.86 45.11 4.79
515 522 2.494918 CGGTCCAGATGTCCGTCC 59.505 66.667 0.00 0.00 39.51 4.79
516 523 2.052690 CGGTCCAGATGTCCGTCCT 61.053 63.158 0.00 0.00 39.51 3.85
517 524 1.517832 GGTCCAGATGTCCGTCCTG 59.482 63.158 0.00 0.00 0.00 3.86
518 525 1.517832 GTCCAGATGTCCGTCCTGG 59.482 63.158 0.00 0.00 46.64 4.45
519 526 2.187946 CCAGATGTCCGTCCTGGC 59.812 66.667 0.00 0.00 40.69 4.85
520 527 2.362369 CCAGATGTCCGTCCTGGCT 61.362 63.158 0.00 0.00 40.69 4.75
521 528 1.142748 CAGATGTCCGTCCTGGCTC 59.857 63.158 0.00 0.00 37.80 4.70
522 529 2.060980 AGATGTCCGTCCTGGCTCC 61.061 63.158 0.00 0.00 37.80 4.70
523 530 2.284625 ATGTCCGTCCTGGCTCCA 60.285 61.111 0.00 0.00 37.80 3.86
524 531 2.303549 GATGTCCGTCCTGGCTCCAG 62.304 65.000 8.93 8.93 43.26 3.86
525 532 4.459089 GTCCGTCCTGGCTCCAGC 62.459 72.222 10.37 0.00 42.35 4.85
527 534 4.463879 CCGTCCTGGCTCCAGCAG 62.464 72.222 10.37 3.94 44.36 4.24
541 548 4.443266 GCAGCCGCTCCGTCTTCT 62.443 66.667 0.00 0.00 34.30 2.85
542 549 2.262915 CAGCCGCTCCGTCTTCTT 59.737 61.111 0.00 0.00 0.00 2.52
543 550 1.807573 CAGCCGCTCCGTCTTCTTC 60.808 63.158 0.00 0.00 0.00 2.87
544 551 1.979693 AGCCGCTCCGTCTTCTTCT 60.980 57.895 0.00 0.00 0.00 2.85
545 552 1.517475 GCCGCTCCGTCTTCTTCTC 60.517 63.158 0.00 0.00 0.00 2.87
546 553 1.139947 CCGCTCCGTCTTCTTCTCC 59.860 63.158 0.00 0.00 0.00 3.71
547 554 1.316706 CCGCTCCGTCTTCTTCTCCT 61.317 60.000 0.00 0.00 0.00 3.69
548 555 0.528470 CGCTCCGTCTTCTTCTCCTT 59.472 55.000 0.00 0.00 0.00 3.36
549 556 1.067495 CGCTCCGTCTTCTTCTCCTTT 60.067 52.381 0.00 0.00 0.00 3.11
550 557 2.612604 GCTCCGTCTTCTTCTCCTTTC 58.387 52.381 0.00 0.00 0.00 2.62
551 558 2.232696 GCTCCGTCTTCTTCTCCTTTCT 59.767 50.000 0.00 0.00 0.00 2.52
552 559 3.306433 GCTCCGTCTTCTTCTCCTTTCTT 60.306 47.826 0.00 0.00 0.00 2.52
553 560 4.490743 CTCCGTCTTCTTCTCCTTTCTTC 58.509 47.826 0.00 0.00 0.00 2.87
554 561 3.258622 TCCGTCTTCTTCTCCTTTCTTCC 59.741 47.826 0.00 0.00 0.00 3.46
555 562 3.246619 CGTCTTCTTCTCCTTTCTTCCG 58.753 50.000 0.00 0.00 0.00 4.30
556 563 3.305471 CGTCTTCTTCTCCTTTCTTCCGT 60.305 47.826 0.00 0.00 0.00 4.69
557 564 4.239304 GTCTTCTTCTCCTTTCTTCCGTC 58.761 47.826 0.00 0.00 0.00 4.79
558 565 4.021807 GTCTTCTTCTCCTTTCTTCCGTCT 60.022 45.833 0.00 0.00 0.00 4.18
559 566 4.589374 TCTTCTTCTCCTTTCTTCCGTCTT 59.411 41.667 0.00 0.00 0.00 3.01
560 567 4.522722 TCTTCTCCTTTCTTCCGTCTTC 57.477 45.455 0.00 0.00 0.00 2.87
561 568 4.153411 TCTTCTCCTTTCTTCCGTCTTCT 58.847 43.478 0.00 0.00 0.00 2.85
562 569 4.218852 TCTTCTCCTTTCTTCCGTCTTCTC 59.781 45.833 0.00 0.00 0.00 2.87
563 570 3.768878 TCTCCTTTCTTCCGTCTTCTCT 58.231 45.455 0.00 0.00 0.00 3.10
564 571 4.153411 TCTCCTTTCTTCCGTCTTCTCTT 58.847 43.478 0.00 0.00 0.00 2.85
565 572 4.218852 TCTCCTTTCTTCCGTCTTCTCTTC 59.781 45.833 0.00 0.00 0.00 2.87
566 573 3.258622 TCCTTTCTTCCGTCTTCTCTTCC 59.741 47.826 0.00 0.00 0.00 3.46
567 574 3.006967 CCTTTCTTCCGTCTTCTCTTCCA 59.993 47.826 0.00 0.00 0.00 3.53
568 575 3.662247 TTCTTCCGTCTTCTCTTCCAC 57.338 47.619 0.00 0.00 0.00 4.02
569 576 1.540267 TCTTCCGTCTTCTCTTCCACG 59.460 52.381 0.00 0.00 0.00 4.94
570 577 0.038526 TTCCGTCTTCTCTTCCACGC 60.039 55.000 0.00 0.00 0.00 5.34
571 578 0.894184 TCCGTCTTCTCTTCCACGCT 60.894 55.000 0.00 0.00 0.00 5.07
572 579 0.038159 CCGTCTTCTCTTCCACGCTT 60.038 55.000 0.00 0.00 0.00 4.68
573 580 1.341606 CGTCTTCTCTTCCACGCTTC 58.658 55.000 0.00 0.00 0.00 3.86
574 581 1.715993 GTCTTCTCTTCCACGCTTCC 58.284 55.000 0.00 0.00 0.00 3.46
575 582 0.608640 TCTTCTCTTCCACGCTTCCC 59.391 55.000 0.00 0.00 0.00 3.97
576 583 0.610687 CTTCTCTTCCACGCTTCCCT 59.389 55.000 0.00 0.00 0.00 4.20
577 584 0.608640 TTCTCTTCCACGCTTCCCTC 59.391 55.000 0.00 0.00 0.00 4.30
578 585 1.153745 CTCTTCCACGCTTCCCTCG 60.154 63.158 0.00 0.00 0.00 4.63
579 586 2.815647 CTTCCACGCTTCCCTCGC 60.816 66.667 0.00 0.00 0.00 5.03
586 593 4.162690 GCTTCCCTCGCGGATGGT 62.163 66.667 6.13 0.00 41.63 3.55
587 594 2.202932 CTTCCCTCGCGGATGGTG 60.203 66.667 6.13 1.51 41.63 4.17
588 595 3.000819 TTCCCTCGCGGATGGTGT 61.001 61.111 6.13 0.00 41.63 4.16
589 596 1.672854 CTTCCCTCGCGGATGGTGTA 61.673 60.000 6.13 0.00 41.63 2.90
590 597 1.672854 TTCCCTCGCGGATGGTGTAG 61.673 60.000 6.13 0.00 41.63 2.74
591 598 2.423898 CCCTCGCGGATGGTGTAGT 61.424 63.158 6.13 0.00 0.00 2.73
592 599 1.515954 CCTCGCGGATGGTGTAGTT 59.484 57.895 6.13 0.00 0.00 2.24
593 600 0.806102 CCTCGCGGATGGTGTAGTTG 60.806 60.000 6.13 0.00 0.00 3.16
594 601 0.108804 CTCGCGGATGGTGTAGTTGT 60.109 55.000 6.13 0.00 0.00 3.32
595 602 1.133598 CTCGCGGATGGTGTAGTTGTA 59.866 52.381 6.13 0.00 0.00 2.41
596 603 1.135315 TCGCGGATGGTGTAGTTGTAC 60.135 52.381 6.13 0.00 0.00 2.90
597 604 1.403116 CGCGGATGGTGTAGTTGTACA 60.403 52.381 0.00 0.00 36.78 2.90
605 612 2.519377 TGTAGTTGTACACTTGCGCT 57.481 45.000 9.73 0.00 36.88 5.92
606 613 2.400399 TGTAGTTGTACACTTGCGCTC 58.600 47.619 9.73 0.00 36.88 5.03
607 614 1.385743 GTAGTTGTACACTTGCGCTCG 59.614 52.381 9.73 1.27 36.88 5.03
608 615 1.154654 GTTGTACACTTGCGCTCGC 60.155 57.895 9.73 7.38 42.35 5.03
618 625 4.863925 GCGCTCGCACTCCTCCTC 62.864 72.222 9.59 0.00 41.49 3.71
619 626 4.544689 CGCTCGCACTCCTCCTCG 62.545 72.222 0.00 0.00 0.00 4.63
620 627 3.444805 GCTCGCACTCCTCCTCGT 61.445 66.667 0.00 0.00 0.00 4.18
621 628 2.795297 CTCGCACTCCTCCTCGTC 59.205 66.667 0.00 0.00 0.00 4.20
622 629 3.102107 CTCGCACTCCTCCTCGTCG 62.102 68.421 0.00 0.00 0.00 5.12
623 630 3.432588 CGCACTCCTCCTCGTCGT 61.433 66.667 0.00 0.00 0.00 4.34
624 631 2.486042 GCACTCCTCCTCGTCGTC 59.514 66.667 0.00 0.00 0.00 4.20
625 632 3.053849 GCACTCCTCCTCGTCGTCC 62.054 68.421 0.00 0.00 0.00 4.79
626 633 2.436292 ACTCCTCCTCGTCGTCCG 60.436 66.667 0.00 0.00 38.13 4.79
627 634 2.436292 CTCCTCCTCGTCGTCCGT 60.436 66.667 0.00 0.00 37.94 4.69
628 635 1.153489 CTCCTCCTCGTCGTCCGTA 60.153 63.158 0.00 0.00 37.94 4.02
629 636 1.152989 CTCCTCCTCGTCGTCCGTAG 61.153 65.000 0.00 0.00 37.94 3.51
630 637 1.449246 CCTCCTCGTCGTCCGTAGT 60.449 63.158 0.00 0.00 37.94 2.73
631 638 1.703438 CCTCCTCGTCGTCCGTAGTG 61.703 65.000 0.00 0.00 37.94 2.74
632 639 1.004560 TCCTCGTCGTCCGTAGTGT 60.005 57.895 0.00 0.00 37.94 3.55
633 640 0.603707 TCCTCGTCGTCCGTAGTGTT 60.604 55.000 0.00 0.00 37.94 3.32
634 641 0.179205 CCTCGTCGTCCGTAGTGTTC 60.179 60.000 0.00 0.00 37.94 3.18
635 642 0.179205 CTCGTCGTCCGTAGTGTTCC 60.179 60.000 0.00 0.00 37.94 3.62
636 643 1.510623 CGTCGTCCGTAGTGTTCCG 60.511 63.158 0.00 0.00 0.00 4.30
637 644 1.868997 GTCGTCCGTAGTGTTCCGA 59.131 57.895 0.00 0.00 0.00 4.55
638 645 0.449388 GTCGTCCGTAGTGTTCCGAT 59.551 55.000 0.00 0.00 0.00 4.18
639 646 1.665679 GTCGTCCGTAGTGTTCCGATA 59.334 52.381 0.00 0.00 0.00 2.92
640 647 2.095853 GTCGTCCGTAGTGTTCCGATAA 59.904 50.000 0.00 0.00 0.00 1.75
641 648 2.945008 TCGTCCGTAGTGTTCCGATAAT 59.055 45.455 0.00 0.00 0.00 1.28
642 649 4.024893 GTCGTCCGTAGTGTTCCGATAATA 60.025 45.833 0.00 0.00 0.00 0.98
643 650 4.024893 TCGTCCGTAGTGTTCCGATAATAC 60.025 45.833 0.00 0.00 0.00 1.89
644 651 4.540824 GTCCGTAGTGTTCCGATAATACC 58.459 47.826 0.00 0.00 0.00 2.73
645 652 4.276926 GTCCGTAGTGTTCCGATAATACCT 59.723 45.833 0.00 0.00 0.00 3.08
646 653 5.470098 GTCCGTAGTGTTCCGATAATACCTA 59.530 44.000 0.00 0.00 0.00 3.08
647 654 6.150140 GTCCGTAGTGTTCCGATAATACCTAT 59.850 42.308 0.00 0.00 0.00 2.57
648 655 6.149973 TCCGTAGTGTTCCGATAATACCTATG 59.850 42.308 0.00 0.00 0.00 2.23
649 656 5.798934 CGTAGTGTTCCGATAATACCTATGC 59.201 44.000 0.00 0.00 0.00 3.14
650 657 5.801531 AGTGTTCCGATAATACCTATGCA 57.198 39.130 0.00 0.00 0.00 3.96
651 658 6.360370 AGTGTTCCGATAATACCTATGCAT 57.640 37.500 3.79 3.79 0.00 3.96
652 659 6.166279 AGTGTTCCGATAATACCTATGCATG 58.834 40.000 10.16 0.00 0.00 4.06
653 660 4.935205 TGTTCCGATAATACCTATGCATGC 59.065 41.667 11.82 11.82 0.00 4.06
654 661 4.817318 TCCGATAATACCTATGCATGCA 57.183 40.909 25.04 25.04 0.00 3.96
655 662 4.503910 TCCGATAATACCTATGCATGCAC 58.496 43.478 25.37 4.94 0.00 4.57
656 663 4.020662 TCCGATAATACCTATGCATGCACA 60.021 41.667 25.37 11.52 0.00 4.57
657 664 4.877823 CCGATAATACCTATGCATGCACAT 59.122 41.667 25.37 11.24 0.00 3.21
658 665 5.220719 CCGATAATACCTATGCATGCACATG 60.221 44.000 25.37 11.68 41.60 3.21
659 666 5.581874 CGATAATACCTATGCATGCACATGA 59.418 40.000 25.37 8.10 41.20 3.07
660 667 6.238022 CGATAATACCTATGCATGCACATGAG 60.238 42.308 25.37 16.98 41.20 2.90
661 668 4.628963 ATACCTATGCATGCACATGAGA 57.371 40.909 25.37 7.53 41.20 3.27
662 669 2.847441 ACCTATGCATGCACATGAGAG 58.153 47.619 25.37 12.76 41.20 3.20
663 670 2.152016 CCTATGCATGCACATGAGAGG 58.848 52.381 25.37 17.58 41.20 3.69
664 671 2.152016 CTATGCATGCACATGAGAGGG 58.848 52.381 25.37 0.00 41.20 4.30
665 672 0.467474 ATGCATGCACATGAGAGGGG 60.467 55.000 25.37 0.00 41.20 4.79
666 673 1.077212 GCATGCACATGAGAGGGGT 60.077 57.895 14.21 0.00 41.20 4.95
667 674 1.381928 GCATGCACATGAGAGGGGTG 61.382 60.000 14.21 0.00 41.20 4.61
668 675 0.034767 CATGCACATGAGAGGGGTGT 60.035 55.000 4.57 0.00 41.20 4.16
669 676 0.254178 ATGCACATGAGAGGGGTGTC 59.746 55.000 0.00 0.00 35.05 3.67
670 677 1.126948 TGCACATGAGAGGGGTGTCA 61.127 55.000 0.00 0.00 35.05 3.58
671 678 0.036732 GCACATGAGAGGGGTGTCAA 59.963 55.000 0.00 0.00 35.05 3.18
672 679 1.947678 GCACATGAGAGGGGTGTCAAG 60.948 57.143 0.00 0.00 35.05 3.02
673 680 1.349026 CACATGAGAGGGGTGTCAAGT 59.651 52.381 0.00 0.00 0.00 3.16
674 681 2.567169 CACATGAGAGGGGTGTCAAGTA 59.433 50.000 0.00 0.00 0.00 2.24
675 682 2.834549 ACATGAGAGGGGTGTCAAGTAG 59.165 50.000 0.00 0.00 0.00 2.57
676 683 2.696526 TGAGAGGGGTGTCAAGTAGT 57.303 50.000 0.00 0.00 0.00 2.73
677 684 3.820195 TGAGAGGGGTGTCAAGTAGTA 57.180 47.619 0.00 0.00 0.00 1.82
678 685 4.332683 TGAGAGGGGTGTCAAGTAGTAT 57.667 45.455 0.00 0.00 0.00 2.12
679 686 5.461516 TGAGAGGGGTGTCAAGTAGTATA 57.538 43.478 0.00 0.00 0.00 1.47
680 687 5.198965 TGAGAGGGGTGTCAAGTAGTATAC 58.801 45.833 0.00 0.00 43.47 1.47
681 688 4.544683 AGAGGGGTGTCAAGTAGTATACC 58.455 47.826 0.00 0.00 44.47 2.73
682 689 4.016851 AGAGGGGTGTCAAGTAGTATACCA 60.017 45.833 0.00 0.00 44.47 3.25
683 690 4.892198 AGGGGTGTCAAGTAGTATACCAT 58.108 43.478 0.00 0.00 44.47 3.55
684 691 4.900054 AGGGGTGTCAAGTAGTATACCATC 59.100 45.833 0.00 0.00 44.47 3.51
685 692 4.040095 GGGGTGTCAAGTAGTATACCATCC 59.960 50.000 0.00 0.00 44.47 3.51
686 693 4.900054 GGGTGTCAAGTAGTATACCATCCT 59.100 45.833 0.00 0.00 44.47 3.24
687 694 5.010820 GGGTGTCAAGTAGTATACCATCCTC 59.989 48.000 0.00 0.00 44.47 3.71
688 695 5.278364 GGTGTCAAGTAGTATACCATCCTCG 60.278 48.000 0.00 0.00 44.47 4.63
689 696 5.530171 GTGTCAAGTAGTATACCATCCTCGA 59.470 44.000 0.00 0.00 44.47 4.04
690 697 6.039047 GTGTCAAGTAGTATACCATCCTCGAA 59.961 42.308 0.00 0.00 44.47 3.71
691 698 6.262496 TGTCAAGTAGTATACCATCCTCGAAG 59.738 42.308 0.00 0.00 44.47 3.79
692 699 5.768662 TCAAGTAGTATACCATCCTCGAAGG 59.231 44.000 0.00 0.00 44.47 3.46
693 700 4.664392 AGTAGTATACCATCCTCGAAGGG 58.336 47.826 0.00 0.00 44.47 3.95
694 701 2.890814 AGTATACCATCCTCGAAGGGG 58.109 52.381 0.00 0.00 35.59 4.79
695 702 2.179424 AGTATACCATCCTCGAAGGGGT 59.821 50.000 0.00 4.16 35.59 4.95
696 703 1.718280 ATACCATCCTCGAAGGGGTC 58.282 55.000 2.16 0.00 35.59 4.46
697 704 0.337082 TACCATCCTCGAAGGGGTCA 59.663 55.000 2.16 0.00 35.59 4.02
698 705 0.546747 ACCATCCTCGAAGGGGTCAA 60.547 55.000 0.00 0.00 35.59 3.18
699 706 0.179000 CCATCCTCGAAGGGGTCAAG 59.821 60.000 0.00 0.00 35.59 3.02
700 707 0.905357 CATCCTCGAAGGGGTCAAGT 59.095 55.000 0.00 0.00 35.59 3.16
701 708 0.905357 ATCCTCGAAGGGGTCAAGTG 59.095 55.000 0.00 0.00 35.59 3.16
702 709 0.178944 TCCTCGAAGGGGTCAAGTGA 60.179 55.000 0.00 0.00 35.59 3.41
703 710 0.247736 CCTCGAAGGGGTCAAGTGAG 59.752 60.000 0.00 0.00 0.00 3.51
704 711 0.390472 CTCGAAGGGGTCAAGTGAGC 60.390 60.000 1.81 1.81 41.50 4.26
705 712 1.118965 TCGAAGGGGTCAAGTGAGCA 61.119 55.000 12.21 0.00 43.82 4.26
706 713 0.951040 CGAAGGGGTCAAGTGAGCAC 60.951 60.000 12.21 8.66 45.68 4.40
708 715 2.426023 GGGGTCAAGTGAGCACGT 59.574 61.111 12.21 0.00 43.82 4.49
709 716 1.961277 GGGGTCAAGTGAGCACGTG 60.961 63.158 12.28 12.28 43.82 4.49
710 717 1.227556 GGGTCAAGTGAGCACGTGT 60.228 57.895 18.38 3.69 43.82 4.49
711 718 0.032952 GGGTCAAGTGAGCACGTGTA 59.967 55.000 18.38 1.01 43.82 2.90
712 719 1.539496 GGGTCAAGTGAGCACGTGTAA 60.539 52.381 18.38 0.00 43.82 2.41
713 720 2.206750 GGTCAAGTGAGCACGTGTAAA 58.793 47.619 18.38 0.00 40.76 2.01
714 721 2.221055 GGTCAAGTGAGCACGTGTAAAG 59.779 50.000 18.38 1.51 40.76 1.85
715 722 3.120792 GTCAAGTGAGCACGTGTAAAGA 58.879 45.455 18.38 3.92 40.76 2.52
716 723 3.554324 GTCAAGTGAGCACGTGTAAAGAA 59.446 43.478 18.38 0.00 40.76 2.52
717 724 3.802139 TCAAGTGAGCACGTGTAAAGAAG 59.198 43.478 18.38 3.47 40.76 2.85
718 725 3.728076 AGTGAGCACGTGTAAAGAAGA 57.272 42.857 18.38 0.00 36.20 2.87
719 726 4.258702 AGTGAGCACGTGTAAAGAAGAT 57.741 40.909 18.38 0.00 36.20 2.40
720 727 3.990469 AGTGAGCACGTGTAAAGAAGATG 59.010 43.478 18.38 0.00 36.20 2.90
721 728 3.987868 GTGAGCACGTGTAAAGAAGATGA 59.012 43.478 18.38 0.00 0.00 2.92
722 729 4.627467 GTGAGCACGTGTAAAGAAGATGAT 59.373 41.667 18.38 0.00 0.00 2.45
723 730 5.120830 GTGAGCACGTGTAAAGAAGATGATT 59.879 40.000 18.38 0.00 0.00 2.57
724 731 5.348724 TGAGCACGTGTAAAGAAGATGATTC 59.651 40.000 18.38 0.00 0.00 2.52
725 732 5.237815 AGCACGTGTAAAGAAGATGATTCA 58.762 37.500 18.38 0.00 0.00 2.57
726 733 5.120830 AGCACGTGTAAAGAAGATGATTCAC 59.879 40.000 18.38 0.00 0.00 3.18
727 734 5.671329 GCACGTGTAAAGAAGATGATTCACC 60.671 44.000 18.38 0.00 0.00 4.02
728 735 5.639506 CACGTGTAAAGAAGATGATTCACCT 59.360 40.000 7.58 0.00 0.00 4.00
729 736 6.147821 CACGTGTAAAGAAGATGATTCACCTT 59.852 38.462 7.58 0.00 0.00 3.50
730 737 6.710744 ACGTGTAAAGAAGATGATTCACCTTT 59.289 34.615 0.00 3.33 33.38 3.11
731 738 7.876068 ACGTGTAAAGAAGATGATTCACCTTTA 59.124 33.333 0.00 2.49 32.09 1.85
732 739 8.883731 CGTGTAAAGAAGATGATTCACCTTTAT 58.116 33.333 0.00 0.00 34.04 1.40
733 740 9.994432 GTGTAAAGAAGATGATTCACCTTTATG 57.006 33.333 0.00 0.00 34.04 1.90
734 741 9.739276 TGTAAAGAAGATGATTCACCTTTATGT 57.261 29.630 0.00 0.00 34.04 2.29
738 745 9.911788 AAGAAGATGATTCACCTTTATGTATGT 57.088 29.630 0.00 0.00 0.00 2.29
739 746 9.334947 AGAAGATGATTCACCTTTATGTATGTG 57.665 33.333 0.00 0.00 0.00 3.21
740 747 9.330063 GAAGATGATTCACCTTTATGTATGTGA 57.670 33.333 0.00 0.00 36.04 3.58
748 755 7.782049 TCACCTTTATGTATGTGAAGTAGAGG 58.218 38.462 0.00 0.00 34.98 3.69
749 756 7.399191 TCACCTTTATGTATGTGAAGTAGAGGT 59.601 37.037 0.00 0.00 34.98 3.85
750 757 7.707035 CACCTTTATGTATGTGAAGTAGAGGTC 59.293 40.741 0.00 0.00 30.17 3.85
751 758 6.918569 CCTTTATGTATGTGAAGTAGAGGTCG 59.081 42.308 0.00 0.00 0.00 4.79
752 759 3.777465 TGTATGTGAAGTAGAGGTCGC 57.223 47.619 0.00 0.00 0.00 5.19
753 760 3.086282 TGTATGTGAAGTAGAGGTCGCA 58.914 45.455 0.00 0.00 38.54 5.10
754 761 2.656560 ATGTGAAGTAGAGGTCGCAC 57.343 50.000 0.00 0.00 37.11 5.34
755 762 0.240145 TGTGAAGTAGAGGTCGCACG 59.760 55.000 0.00 0.00 29.56 5.34
756 763 0.240411 GTGAAGTAGAGGTCGCACGT 59.760 55.000 0.00 0.00 0.00 4.49
757 764 0.240145 TGAAGTAGAGGTCGCACGTG 59.760 55.000 12.28 12.28 0.00 4.49
758 765 0.240411 GAAGTAGAGGTCGCACGTGT 59.760 55.000 18.38 0.00 0.00 4.49
759 766 0.240411 AAGTAGAGGTCGCACGTGTC 59.760 55.000 18.38 6.19 0.00 3.67
760 767 0.887836 AGTAGAGGTCGCACGTGTCA 60.888 55.000 18.38 0.32 0.00 3.58
761 768 0.728466 GTAGAGGTCGCACGTGTCAC 60.728 60.000 18.38 13.44 0.00 3.67
762 769 0.887836 TAGAGGTCGCACGTGTCACT 60.888 55.000 18.38 10.43 0.00 3.41
763 770 1.299926 GAGGTCGCACGTGTCACTT 60.300 57.895 18.38 10.25 0.00 3.16
764 771 1.548973 GAGGTCGCACGTGTCACTTG 61.549 60.000 18.38 5.12 0.00 3.16
765 772 2.245532 GTCGCACGTGTCACTTGC 59.754 61.111 21.27 21.27 39.63 4.01
766 773 2.964925 TCGCACGTGTCACTTGCC 60.965 61.111 24.07 10.26 39.84 4.52
767 774 3.268603 CGCACGTGTCACTTGCCA 61.269 61.111 24.07 0.00 39.84 4.92
768 775 2.818487 CGCACGTGTCACTTGCCAA 61.818 57.895 24.07 0.00 39.84 4.52
769 776 1.431440 GCACGTGTCACTTGCCAAA 59.569 52.632 20.73 0.00 37.39 3.28
770 777 0.865639 GCACGTGTCACTTGCCAAAC 60.866 55.000 20.73 0.00 37.39 2.93
771 778 0.588730 CACGTGTCACTTGCCAAACG 60.589 55.000 7.58 0.00 37.09 3.60
772 779 1.010125 CGTGTCACTTGCCAAACGG 60.010 57.895 0.65 0.00 0.00 4.44
773 780 1.433053 CGTGTCACTTGCCAAACGGA 61.433 55.000 0.65 0.00 0.00 4.69
774 781 0.028902 GTGTCACTTGCCAAACGGAC 59.971 55.000 0.00 0.00 0.00 4.79
775 782 0.107410 TGTCACTTGCCAAACGGACT 60.107 50.000 0.00 0.00 0.00 3.85
776 783 0.586802 GTCACTTGCCAAACGGACTC 59.413 55.000 0.00 0.00 0.00 3.36
777 784 0.468226 TCACTTGCCAAACGGACTCT 59.532 50.000 0.00 0.00 0.00 3.24
778 785 1.134220 TCACTTGCCAAACGGACTCTT 60.134 47.619 0.00 0.00 0.00 2.85
779 786 1.002468 CACTTGCCAAACGGACTCTTG 60.002 52.381 0.00 0.00 0.00 3.02
780 787 0.040067 CTTGCCAAACGGACTCTTGC 60.040 55.000 0.00 0.00 0.00 4.01
781 788 1.452145 TTGCCAAACGGACTCTTGCC 61.452 55.000 0.00 0.00 0.00 4.52
782 789 1.896660 GCCAAACGGACTCTTGCCA 60.897 57.895 0.00 0.00 0.00 4.92
783 790 1.244019 GCCAAACGGACTCTTGCCAT 61.244 55.000 0.00 0.00 0.00 4.40
784 791 0.523072 CCAAACGGACTCTTGCCATG 59.477 55.000 0.00 0.00 0.00 3.66
785 792 1.522668 CAAACGGACTCTTGCCATGA 58.477 50.000 0.00 0.00 0.00 3.07
786 793 2.086869 CAAACGGACTCTTGCCATGAT 58.913 47.619 0.00 0.00 0.00 2.45
787 794 1.742761 AACGGACTCTTGCCATGATG 58.257 50.000 0.00 0.00 0.00 3.07
788 795 0.904649 ACGGACTCTTGCCATGATGA 59.095 50.000 0.00 0.00 0.00 2.92
789 796 1.487976 ACGGACTCTTGCCATGATGAT 59.512 47.619 0.00 0.00 0.00 2.45
790 797 1.871676 CGGACTCTTGCCATGATGATG 59.128 52.381 0.00 0.00 0.00 3.07
791 798 2.744166 CGGACTCTTGCCATGATGATGT 60.744 50.000 0.00 0.00 0.00 3.06
792 799 2.617308 GGACTCTTGCCATGATGATGTG 59.383 50.000 0.00 0.00 0.00 3.21
793 800 2.022195 ACTCTTGCCATGATGATGTGC 58.978 47.619 0.00 0.00 0.00 4.57
794 801 1.002792 CTCTTGCCATGATGATGTGCG 60.003 52.381 0.00 0.00 31.77 5.34
795 802 0.736636 CTTGCCATGATGATGTGCGT 59.263 50.000 0.00 0.00 31.77 5.24
796 803 1.941975 CTTGCCATGATGATGTGCGTA 59.058 47.619 0.00 0.00 31.77 4.42
797 804 1.585297 TGCCATGATGATGTGCGTAG 58.415 50.000 0.00 0.00 31.77 3.51
798 805 0.870393 GCCATGATGATGTGCGTAGG 59.130 55.000 0.00 0.00 0.00 3.18
799 806 1.541015 GCCATGATGATGTGCGTAGGA 60.541 52.381 0.00 0.00 0.00 2.94
800 807 2.873245 GCCATGATGATGTGCGTAGGAT 60.873 50.000 0.00 0.00 0.00 3.24
801 808 2.740447 CCATGATGATGTGCGTAGGATG 59.260 50.000 0.00 0.00 0.00 3.51
802 809 1.869774 TGATGATGTGCGTAGGATGC 58.130 50.000 0.00 0.00 0.00 3.91
803 810 1.413812 TGATGATGTGCGTAGGATGCT 59.586 47.619 0.00 0.00 0.00 3.79
804 811 2.064762 GATGATGTGCGTAGGATGCTC 58.935 52.381 0.00 0.00 0.00 4.26
805 812 0.104855 TGATGTGCGTAGGATGCTCC 59.895 55.000 0.00 0.00 36.58 4.70
806 813 0.941463 GATGTGCGTAGGATGCTCCG 60.941 60.000 0.00 0.00 42.75 4.63
807 814 2.962253 GTGCGTAGGATGCTCCGC 60.962 66.667 17.14 17.14 42.75 5.54
817 824 3.712287 TGCTCCGCATCAGGAAGA 58.288 55.556 0.00 0.00 40.25 2.87
818 825 1.219124 TGCTCCGCATCAGGAAGAC 59.781 57.895 0.00 0.00 40.25 3.01
819 826 1.260538 TGCTCCGCATCAGGAAGACT 61.261 55.000 0.00 0.00 40.25 3.24
820 827 3.435687 TGCTCCGCATCAGGAAGACTG 62.436 57.143 0.00 0.00 40.35 3.51
829 836 0.248843 CAGGAAGACTGTGGAGGAGC 59.751 60.000 0.00 0.00 42.42 4.70
830 837 0.178921 AGGAAGACTGTGGAGGAGCA 60.179 55.000 0.00 0.00 0.00 4.26
831 838 0.248843 GGAAGACTGTGGAGGAGCAG 59.751 60.000 0.00 0.00 38.58 4.24
832 839 1.261480 GAAGACTGTGGAGGAGCAGA 58.739 55.000 0.00 0.00 36.62 4.26
833 840 1.204467 GAAGACTGTGGAGGAGCAGAG 59.796 57.143 0.00 0.00 36.62 3.35
834 841 1.217779 GACTGTGGAGGAGCAGAGC 59.782 63.158 0.00 0.00 36.62 4.09
835 842 2.237534 GACTGTGGAGGAGCAGAGCC 62.238 65.000 0.00 0.00 36.62 4.70
836 843 2.203832 TGTGGAGGAGCAGAGCCA 60.204 61.111 0.00 0.00 0.00 4.75
837 844 2.267324 GTGGAGGAGCAGAGCCAC 59.733 66.667 0.00 0.00 43.34 5.01
838 845 3.385384 TGGAGGAGCAGAGCCACG 61.385 66.667 0.00 0.00 0.00 4.94
839 846 3.071206 GGAGGAGCAGAGCCACGA 61.071 66.667 0.00 0.00 0.00 4.35
840 847 2.183046 GAGGAGCAGAGCCACGAC 59.817 66.667 0.00 0.00 0.00 4.34
841 848 3.691744 GAGGAGCAGAGCCACGACG 62.692 68.421 0.00 0.00 0.00 5.12
842 849 4.803426 GGAGCAGAGCCACGACGG 62.803 72.222 0.00 0.00 38.11 4.79
851 858 4.873129 CCACGACGGCCGGAGATG 62.873 72.222 31.76 20.63 43.93 2.90
852 859 3.822192 CACGACGGCCGGAGATGA 61.822 66.667 31.76 0.00 43.93 2.92
853 860 3.066190 ACGACGGCCGGAGATGAA 61.066 61.111 31.76 0.00 43.93 2.57
854 861 2.183300 CGACGGCCGGAGATGAAA 59.817 61.111 31.76 0.00 33.91 2.69
855 862 1.878522 CGACGGCCGGAGATGAAAG 60.879 63.158 31.76 5.40 33.91 2.62
856 863 1.515954 GACGGCCGGAGATGAAAGA 59.484 57.895 31.76 0.00 0.00 2.52
857 864 0.108329 GACGGCCGGAGATGAAAGAA 60.108 55.000 31.76 0.00 0.00 2.52
858 865 0.323629 ACGGCCGGAGATGAAAGAAA 59.676 50.000 31.76 0.00 0.00 2.52
859 866 1.271163 ACGGCCGGAGATGAAAGAAAA 60.271 47.619 31.76 0.00 0.00 2.29
860 867 1.810151 CGGCCGGAGATGAAAGAAAAA 59.190 47.619 20.10 0.00 0.00 1.94
861 868 2.159517 CGGCCGGAGATGAAAGAAAAAG 60.160 50.000 20.10 0.00 0.00 2.27
862 869 3.081804 GGCCGGAGATGAAAGAAAAAGA 58.918 45.455 5.05 0.00 0.00 2.52
863 870 3.127721 GGCCGGAGATGAAAGAAAAAGAG 59.872 47.826 5.05 0.00 0.00 2.85
864 871 3.127721 GCCGGAGATGAAAGAAAAAGAGG 59.872 47.826 5.05 0.00 0.00 3.69
865 872 4.579869 CCGGAGATGAAAGAAAAAGAGGA 58.420 43.478 0.00 0.00 0.00 3.71
866 873 5.003804 CCGGAGATGAAAGAAAAAGAGGAA 58.996 41.667 0.00 0.00 0.00 3.36
867 874 5.649831 CCGGAGATGAAAGAAAAAGAGGAAT 59.350 40.000 0.00 0.00 0.00 3.01
868 875 6.823689 CCGGAGATGAAAGAAAAAGAGGAATA 59.176 38.462 0.00 0.00 0.00 1.75
869 876 7.011857 CCGGAGATGAAAGAAAAAGAGGAATAG 59.988 40.741 0.00 0.00 0.00 1.73
870 877 7.550906 CGGAGATGAAAGAAAAAGAGGAATAGT 59.449 37.037 0.00 0.00 0.00 2.12
871 878 8.888716 GGAGATGAAAGAAAAAGAGGAATAGTC 58.111 37.037 0.00 0.00 0.00 2.59
872 879 8.485976 AGATGAAAGAAAAAGAGGAATAGTCG 57.514 34.615 0.00 0.00 0.00 4.18
873 880 6.481954 TGAAAGAAAAAGAGGAATAGTCGC 57.518 37.500 0.00 0.00 0.00 5.19
874 881 5.120208 TGAAAGAAAAAGAGGAATAGTCGCG 59.880 40.000 0.00 0.00 0.00 5.87
875 882 2.930682 AGAAAAAGAGGAATAGTCGCGC 59.069 45.455 0.00 0.00 0.00 6.86
876 883 1.278238 AAAAGAGGAATAGTCGCGCG 58.722 50.000 26.76 26.76 0.00 6.86
877 884 0.527817 AAAGAGGAATAGTCGCGCGG 60.528 55.000 31.69 11.75 0.00 6.46
878 885 1.381928 AAGAGGAATAGTCGCGCGGA 61.382 55.000 31.69 16.31 0.00 5.54
879 886 1.065273 GAGGAATAGTCGCGCGGAA 59.935 57.895 31.69 16.07 0.00 4.30
880 887 1.207377 GAGGAATAGTCGCGCGGAAC 61.207 60.000 31.69 21.88 0.00 3.62
881 888 2.235699 GGAATAGTCGCGCGGAACC 61.236 63.158 31.69 19.59 0.00 3.62
882 889 1.226888 GAATAGTCGCGCGGAACCT 60.227 57.895 31.69 21.41 0.00 3.50
883 890 0.029834 GAATAGTCGCGCGGAACCTA 59.970 55.000 31.69 22.76 0.00 3.08
884 891 0.672342 AATAGTCGCGCGGAACCTAT 59.328 50.000 31.69 23.83 0.00 2.57
885 892 0.240411 ATAGTCGCGCGGAACCTATC 59.760 55.000 31.69 10.04 0.00 2.08
886 893 1.789078 TAGTCGCGCGGAACCTATCC 61.789 60.000 31.69 6.60 45.57 2.59
887 894 2.831742 TCGCGCGGAACCTATCCT 60.832 61.111 31.69 0.00 46.98 3.24
888 895 2.658593 CGCGCGGAACCTATCCTG 60.659 66.667 24.84 0.00 46.98 3.86
889 896 2.499685 GCGCGGAACCTATCCTGT 59.500 61.111 8.83 0.00 46.98 4.00
890 897 1.737816 GCGCGGAACCTATCCTGTA 59.262 57.895 8.83 0.00 46.98 2.74
891 898 0.318784 GCGCGGAACCTATCCTGTAG 60.319 60.000 8.83 0.00 46.98 2.74
892 899 1.315690 CGCGGAACCTATCCTGTAGA 58.684 55.000 0.00 0.00 46.98 2.59
893 900 1.001597 CGCGGAACCTATCCTGTAGAC 60.002 57.143 0.00 0.00 46.98 2.59
894 901 1.001597 GCGGAACCTATCCTGTAGACG 60.002 57.143 0.00 0.00 46.98 4.18
895 902 2.295885 CGGAACCTATCCTGTAGACGT 58.704 52.381 0.00 0.00 46.98 4.34
896 903 2.033049 CGGAACCTATCCTGTAGACGTG 59.967 54.545 0.00 0.00 46.98 4.49
897 904 3.022406 GGAACCTATCCTGTAGACGTGT 58.978 50.000 0.00 0.00 45.56 4.49
898 905 3.066481 GGAACCTATCCTGTAGACGTGTC 59.934 52.174 0.00 0.00 45.56 3.67
899 906 3.648507 ACCTATCCTGTAGACGTGTCT 57.351 47.619 7.77 7.77 43.40 3.41
900 907 3.543665 ACCTATCCTGTAGACGTGTCTC 58.456 50.000 5.66 0.00 40.93 3.36
901 908 2.544686 CCTATCCTGTAGACGTGTCTCG 59.455 54.545 5.66 0.00 46.00 4.04
902 909 0.733729 ATCCTGTAGACGTGTCTCGC 59.266 55.000 5.66 2.02 44.19 5.03
903 910 1.226046 CCTGTAGACGTGTCTCGCG 60.226 63.158 5.66 0.00 44.19 5.87
904 911 1.863880 CTGTAGACGTGTCTCGCGC 60.864 63.158 5.66 0.00 44.19 6.86
918 925 4.337060 GCGCGGGGTGGTTGTTTC 62.337 66.667 8.83 0.00 0.00 2.78
919 926 4.020378 CGCGGGGTGGTTGTTTCG 62.020 66.667 0.00 0.00 0.00 3.46
920 927 2.903350 GCGGGGTGGTTGTTTCGT 60.903 61.111 0.00 0.00 0.00 3.85
921 928 3.027292 CGGGGTGGTTGTTTCGTG 58.973 61.111 0.00 0.00 0.00 4.35
922 929 1.524165 CGGGGTGGTTGTTTCGTGA 60.524 57.895 0.00 0.00 0.00 4.35
923 930 1.778027 CGGGGTGGTTGTTTCGTGAC 61.778 60.000 0.00 0.00 0.00 3.67
924 931 1.644913 GGGTGGTTGTTTCGTGACG 59.355 57.895 0.00 0.00 0.00 4.35
925 932 1.010462 GGTGGTTGTTTCGTGACGC 60.010 57.895 0.00 0.00 0.00 5.19
926 933 1.367195 GTGGTTGTTTCGTGACGCG 60.367 57.895 3.53 3.53 43.01 6.01
966 973 3.056328 GGACTGCCGGCTCCAAAC 61.056 66.667 29.70 12.46 0.00 2.93
985 992 5.402270 CCAAACGTTTTCCAATCATGAAGTC 59.598 40.000 11.66 0.00 0.00 3.01
993 1000 2.608970 AATCATGAAGTCCCGCCGGG 62.609 60.000 18.41 18.41 46.11 5.73
1037 1044 4.154347 CCCAGGGCAGACTCGCTC 62.154 72.222 0.00 0.00 0.00 5.03
1187 1208 1.016627 CACACAATCTACCATGGCCG 58.983 55.000 13.04 2.64 0.00 6.13
1264 1285 2.452114 CCACCTCTCCTGGACCCT 59.548 66.667 0.00 0.00 0.00 4.34
1265 1286 1.992277 CCACCTCTCCTGGACCCTG 60.992 68.421 0.00 0.00 0.00 4.45
1266 1287 2.284995 ACCTCTCCTGGACCCTGC 60.285 66.667 0.00 0.00 0.00 4.85
1267 1288 2.040278 CCTCTCCTGGACCCTGCT 59.960 66.667 0.00 0.00 0.00 4.24
1268 1289 2.063378 CCTCTCCTGGACCCTGCTC 61.063 68.421 0.00 0.00 0.00 4.26
1269 1290 2.039624 TCTCCTGGACCCTGCTCC 59.960 66.667 0.00 0.00 0.00 4.70
1270 1291 2.284921 CTCCTGGACCCTGCTCCA 60.285 66.667 0.00 0.00 38.05 3.86
1271 1292 2.607750 TCCTGGACCCTGCTCCAC 60.608 66.667 0.00 0.00 35.23 4.02
1272 1293 3.721706 CCTGGACCCTGCTCCACC 61.722 72.222 0.00 0.00 35.23 4.61
1383 1413 1.153449 TCCGTCGCATTCCACATCC 60.153 57.895 0.00 0.00 0.00 3.51
1797 2099 2.736682 CCGCCGGTTTCGACATGAC 61.737 63.158 1.90 0.00 39.00 3.06
2197 2499 4.572795 GGATGGTAGAGAAAGCAGCTAAAC 59.427 45.833 0.00 0.00 33.91 2.01
2233 2535 2.769663 AGGAAAAAGGGGTTGTTGGTTC 59.230 45.455 0.00 0.00 0.00 3.62
2301 2603 1.279025 GGGTTGGGGATGGCTGTAGA 61.279 60.000 0.00 0.00 0.00 2.59
2838 3140 2.079158 GCTTGCTCATGCTACAACTCA 58.921 47.619 0.00 0.00 40.48 3.41
3138 3440 1.166531 ACGCAACTTCAACTGGAGCC 61.167 55.000 0.00 0.00 0.00 4.70
3187 3489 8.088463 AGATAGGGATATTATTTCAGAGGCTG 57.912 38.462 0.00 0.00 0.00 4.85
3555 3857 9.574516 AGTTATGGGTGATTCATATTTCTTACC 57.425 33.333 0.00 0.00 0.00 2.85
3693 3995 5.008019 AGTGTGTCTTTTACAAGCATCAGTG 59.992 40.000 0.00 0.00 40.63 3.66
3734 4036 3.838244 TTGGATATCTGTACTGCACCC 57.162 47.619 2.05 0.00 0.00 4.61
3821 4123 2.490115 GGGCAAATGTGGTATCGTTGAA 59.510 45.455 0.00 0.00 0.00 2.69
3843 4145 2.826488 AGTGAGAGAAGGCACCAGTAT 58.174 47.619 0.00 0.00 35.67 2.12
3892 4194 8.690680 ACTAACGAGTCAGAAACTGAAATATC 57.309 34.615 2.98 0.35 42.46 1.63
3984 4286 6.585695 TGTATTACGAGGAATAGGGATCAC 57.414 41.667 0.00 0.00 0.00 3.06
4060 4362 3.595819 GTGAATCCACAGCCTGCC 58.404 61.111 0.00 0.00 42.72 4.85
4157 4459 7.602644 TGTTGTACTATGGAATGTTCAGACTTC 59.397 37.037 0.00 0.00 0.00 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 5.185828 GGGATGAACTTTGCCTTGTATCTTT 59.814 40.000 0.00 0.00 0.00 2.52
2 3 4.706962 GGGATGAACTTTGCCTTGTATCTT 59.293 41.667 0.00 0.00 0.00 2.40
3 4 4.263905 TGGGATGAACTTTGCCTTGTATCT 60.264 41.667 0.00 0.00 0.00 1.98
4 5 4.016444 TGGGATGAACTTTGCCTTGTATC 58.984 43.478 0.00 0.00 0.00 2.24
5 6 4.046286 TGGGATGAACTTTGCCTTGTAT 57.954 40.909 0.00 0.00 0.00 2.29
6 7 3.517296 TGGGATGAACTTTGCCTTGTA 57.483 42.857 0.00 0.00 0.00 2.41
7 8 2.380064 TGGGATGAACTTTGCCTTGT 57.620 45.000 0.00 0.00 0.00 3.16
8 9 3.368739 GGATTGGGATGAACTTTGCCTTG 60.369 47.826 0.00 0.00 0.00 3.61
9 10 2.833943 GGATTGGGATGAACTTTGCCTT 59.166 45.455 0.00 0.00 0.00 4.35
10 11 2.043526 AGGATTGGGATGAACTTTGCCT 59.956 45.455 0.00 0.00 0.00 4.75
11 12 2.460669 AGGATTGGGATGAACTTTGCC 58.539 47.619 0.00 0.00 0.00 4.52
12 13 3.853475 CAAGGATTGGGATGAACTTTGC 58.147 45.455 0.00 0.00 43.94 3.68
25 26 1.341383 CCCCAACTCCTCCAAGGATTG 60.341 57.143 0.00 4.24 44.81 2.67
26 27 1.002857 CCCCAACTCCTCCAAGGATT 58.997 55.000 0.00 0.00 44.81 3.01
27 28 0.178831 ACCCCAACTCCTCCAAGGAT 60.179 55.000 0.00 0.00 44.81 3.24
28 29 0.840722 GACCCCAACTCCTCCAAGGA 60.841 60.000 0.00 0.00 43.43 3.36
29 30 0.842467 AGACCCCAACTCCTCCAAGG 60.842 60.000 0.00 0.00 36.46 3.61
30 31 1.068121 AAGACCCCAACTCCTCCAAG 58.932 55.000 0.00 0.00 0.00 3.61
31 32 0.771127 CAAGACCCCAACTCCTCCAA 59.229 55.000 0.00 0.00 0.00 3.53
32 33 0.104672 TCAAGACCCCAACTCCTCCA 60.105 55.000 0.00 0.00 0.00 3.86
33 34 1.065126 CATCAAGACCCCAACTCCTCC 60.065 57.143 0.00 0.00 0.00 4.30
34 35 1.909302 TCATCAAGACCCCAACTCCTC 59.091 52.381 0.00 0.00 0.00 3.71
35 36 2.044793 TCATCAAGACCCCAACTCCT 57.955 50.000 0.00 0.00 0.00 3.69
36 37 4.505742 GGATATCATCAAGACCCCAACTCC 60.506 50.000 4.83 0.00 0.00 3.85
37 38 4.505742 GGGATATCATCAAGACCCCAACTC 60.506 50.000 4.83 0.00 32.77 3.01
38 39 3.395941 GGGATATCATCAAGACCCCAACT 59.604 47.826 4.83 0.00 32.77 3.16
39 40 3.756117 GGGATATCATCAAGACCCCAAC 58.244 50.000 4.83 0.00 32.77 3.77
40 41 2.371841 CGGGATATCATCAAGACCCCAA 59.628 50.000 4.83 0.00 34.45 4.12
41 42 1.977854 CGGGATATCATCAAGACCCCA 59.022 52.381 4.83 0.00 34.45 4.96
62 66 4.026052 TGTGAGCATGTGAGAAGATCCTA 58.974 43.478 0.00 0.00 0.00 2.94
77 81 0.401356 TCAAGCCCTTCATGTGAGCA 59.599 50.000 0.00 0.00 0.00 4.26
78 82 1.200948 GTTCAAGCCCTTCATGTGAGC 59.799 52.381 0.00 0.00 0.00 4.26
79 83 2.746362 GAGTTCAAGCCCTTCATGTGAG 59.254 50.000 0.00 0.00 0.00 3.51
80 84 2.553028 GGAGTTCAAGCCCTTCATGTGA 60.553 50.000 0.00 0.00 0.00 3.58
81 85 1.815003 GGAGTTCAAGCCCTTCATGTG 59.185 52.381 0.00 0.00 0.00 3.21
82 86 1.425066 TGGAGTTCAAGCCCTTCATGT 59.575 47.619 0.00 0.00 0.00 3.21
83 87 2.205022 TGGAGTTCAAGCCCTTCATG 57.795 50.000 0.00 0.00 0.00 3.07
87 91 0.040204 CCCATGGAGTTCAAGCCCTT 59.960 55.000 15.22 0.00 0.00 3.95
103 107 2.240160 GAGAGAGAGACTACCACTCCCA 59.760 54.545 0.00 0.00 35.27 4.37
104 108 2.508300 AGAGAGAGAGACTACCACTCCC 59.492 54.545 0.00 0.00 35.27 4.30
110 114 4.649674 TGAGAGAGAGAGAGAGAGACTACC 59.350 50.000 0.00 0.00 0.00 3.18
113 117 5.026121 TCTTGAGAGAGAGAGAGAGAGACT 58.974 45.833 0.00 0.00 0.00 3.24
164 168 8.616076 GTTAGCAAAGTGATAGCTCATTTGTAT 58.384 33.333 0.00 0.00 39.68 2.29
167 171 6.261118 GGTTAGCAAAGTGATAGCTCATTTG 58.739 40.000 0.00 0.00 39.68 2.32
168 172 5.358160 GGGTTAGCAAAGTGATAGCTCATTT 59.642 40.000 0.00 0.00 39.68 2.32
195 199 2.261729 AGACCTCCTCCACCTTCTTTC 58.738 52.381 0.00 0.00 0.00 2.62
199 203 6.783482 ACTATAAATAGACCTCCTCCACCTTC 59.217 42.308 4.02 0.00 34.50 3.46
200 204 6.694611 ACTATAAATAGACCTCCTCCACCTT 58.305 40.000 4.02 0.00 34.50 3.50
201 205 6.296435 ACTATAAATAGACCTCCTCCACCT 57.704 41.667 4.02 0.00 34.50 4.00
204 208 6.289482 TGGACTATAAATAGACCTCCTCCA 57.711 41.667 16.07 9.28 42.91 3.86
226 230 0.613777 ACTTACCCCTTCGCCTCTTG 59.386 55.000 0.00 0.00 0.00 3.02
228 232 0.252103 TCACTTACCCCTTCGCCTCT 60.252 55.000 0.00 0.00 0.00 3.69
229 233 0.175989 CTCACTTACCCCTTCGCCTC 59.824 60.000 0.00 0.00 0.00 4.70
230 234 1.265454 CCTCACTTACCCCTTCGCCT 61.265 60.000 0.00 0.00 0.00 5.52
280 284 4.403137 TTTGCCTGCGCGCATGAC 62.403 61.111 35.42 26.32 38.87 3.06
281 285 4.105733 CTTTGCCTGCGCGCATGA 62.106 61.111 35.42 19.98 38.87 3.07
313 319 2.872388 CGGATCATCTGGGACCCCG 61.872 68.421 8.45 0.61 39.42 5.73
346 352 2.735237 GACCCGTCCGGATCATCC 59.265 66.667 7.81 0.00 37.50 3.51
377 384 4.570663 CATCCGGACCCTCGACGC 62.571 72.222 6.12 0.00 0.00 5.19
379 386 1.660917 GATCATCCGGACCCTCGAC 59.339 63.158 6.12 0.00 0.00 4.20
450 457 0.030369 GATCGTCCGGATAAGTGCGT 59.970 55.000 7.81 0.00 37.49 5.24
451 458 0.663568 GGATCGTCCGGATAAGTGCG 60.664 60.000 7.81 5.31 34.82 5.34
452 459 3.196613 GGATCGTCCGGATAAGTGC 57.803 57.895 7.81 0.00 34.82 4.40
465 472 3.547513 GGACCTTCCCCCGGATCG 61.548 72.222 0.73 0.00 0.00 3.69
473 480 1.755384 GGATCATCCGGACCTTCCC 59.245 63.158 6.12 0.43 31.13 3.97
493 500 2.202756 GACATCTGGACCGCCGTC 60.203 66.667 0.00 0.00 38.38 4.79
494 501 3.771160 GGACATCTGGACCGCCGT 61.771 66.667 0.00 0.00 36.79 5.68
495 502 4.873129 CGGACATCTGGACCGCCG 62.873 72.222 0.00 0.00 40.19 6.46
499 506 1.517832 CAGGACGGACATCTGGACC 59.482 63.158 0.00 0.00 0.00 4.46
503 510 1.142748 GAGCCAGGACGGACATCTG 59.857 63.158 0.00 0.00 36.56 2.90
504 511 2.060980 GGAGCCAGGACGGACATCT 61.061 63.158 0.00 0.00 36.56 2.90
505 512 2.303549 CTGGAGCCAGGACGGACATC 62.304 65.000 8.69 0.00 40.17 3.06
506 513 2.284625 TGGAGCCAGGACGGACAT 60.285 61.111 0.00 0.00 36.56 3.06
507 514 2.997315 CTGGAGCCAGGACGGACA 60.997 66.667 8.69 0.00 40.17 4.02
508 515 4.459089 GCTGGAGCCAGGACGGAC 62.459 72.222 17.64 0.00 43.77 4.79
510 517 4.463879 CTGCTGGAGCCAGGACGG 62.464 72.222 17.64 3.93 43.77 4.79
527 534 1.517475 GAGAAGAAGACGGAGCGGC 60.517 63.158 0.00 0.00 33.59 6.53
528 535 1.139947 GGAGAAGAAGACGGAGCGG 59.860 63.158 0.00 0.00 0.00 5.52
529 536 0.528470 AAGGAGAAGAAGACGGAGCG 59.472 55.000 0.00 0.00 0.00 5.03
530 537 2.232696 AGAAAGGAGAAGAAGACGGAGC 59.767 50.000 0.00 0.00 0.00 4.70
531 538 4.490743 GAAGAAAGGAGAAGAAGACGGAG 58.509 47.826 0.00 0.00 0.00 4.63
532 539 3.258622 GGAAGAAAGGAGAAGAAGACGGA 59.741 47.826 0.00 0.00 0.00 4.69
533 540 3.591023 GGAAGAAAGGAGAAGAAGACGG 58.409 50.000 0.00 0.00 0.00 4.79
534 541 3.246619 CGGAAGAAAGGAGAAGAAGACG 58.753 50.000 0.00 0.00 0.00 4.18
535 542 4.021807 AGACGGAAGAAAGGAGAAGAAGAC 60.022 45.833 0.00 0.00 0.00 3.01
536 543 4.153411 AGACGGAAGAAAGGAGAAGAAGA 58.847 43.478 0.00 0.00 0.00 2.87
537 544 4.529109 AGACGGAAGAAAGGAGAAGAAG 57.471 45.455 0.00 0.00 0.00 2.85
538 545 4.589374 AGAAGACGGAAGAAAGGAGAAGAA 59.411 41.667 0.00 0.00 0.00 2.52
539 546 4.153411 AGAAGACGGAAGAAAGGAGAAGA 58.847 43.478 0.00 0.00 0.00 2.87
540 547 4.219725 AGAGAAGACGGAAGAAAGGAGAAG 59.780 45.833 0.00 0.00 0.00 2.85
541 548 4.153411 AGAGAAGACGGAAGAAAGGAGAA 58.847 43.478 0.00 0.00 0.00 2.87
542 549 3.768878 AGAGAAGACGGAAGAAAGGAGA 58.231 45.455 0.00 0.00 0.00 3.71
543 550 4.490743 GAAGAGAAGACGGAAGAAAGGAG 58.509 47.826 0.00 0.00 0.00 3.69
544 551 3.258622 GGAAGAGAAGACGGAAGAAAGGA 59.741 47.826 0.00 0.00 0.00 3.36
545 552 3.006967 TGGAAGAGAAGACGGAAGAAAGG 59.993 47.826 0.00 0.00 0.00 3.11
546 553 3.991121 GTGGAAGAGAAGACGGAAGAAAG 59.009 47.826 0.00 0.00 0.00 2.62
547 554 3.552273 CGTGGAAGAGAAGACGGAAGAAA 60.552 47.826 0.00 0.00 0.00 2.52
548 555 2.030185 CGTGGAAGAGAAGACGGAAGAA 60.030 50.000 0.00 0.00 0.00 2.52
549 556 1.540267 CGTGGAAGAGAAGACGGAAGA 59.460 52.381 0.00 0.00 0.00 2.87
550 557 1.983972 CGTGGAAGAGAAGACGGAAG 58.016 55.000 0.00 0.00 0.00 3.46
551 558 0.038526 GCGTGGAAGAGAAGACGGAA 60.039 55.000 0.00 0.00 32.45 4.30
552 559 0.894184 AGCGTGGAAGAGAAGACGGA 60.894 55.000 0.00 0.00 32.45 4.69
553 560 0.038159 AAGCGTGGAAGAGAAGACGG 60.038 55.000 0.00 0.00 32.45 4.79
554 561 1.341606 GAAGCGTGGAAGAGAAGACG 58.658 55.000 0.00 0.00 34.93 4.18
555 562 1.673329 GGGAAGCGTGGAAGAGAAGAC 60.673 57.143 0.00 0.00 0.00 3.01
556 563 0.608640 GGGAAGCGTGGAAGAGAAGA 59.391 55.000 0.00 0.00 0.00 2.87
557 564 0.610687 AGGGAAGCGTGGAAGAGAAG 59.389 55.000 0.00 0.00 0.00 2.85
558 565 0.608640 GAGGGAAGCGTGGAAGAGAA 59.391 55.000 0.00 0.00 0.00 2.87
559 566 1.595993 CGAGGGAAGCGTGGAAGAGA 61.596 60.000 0.00 0.00 0.00 3.10
560 567 1.153745 CGAGGGAAGCGTGGAAGAG 60.154 63.158 0.00 0.00 0.00 2.85
561 568 2.970639 CGAGGGAAGCGTGGAAGA 59.029 61.111 0.00 0.00 0.00 2.87
562 569 2.815647 GCGAGGGAAGCGTGGAAG 60.816 66.667 0.00 0.00 0.00 3.46
575 582 0.108804 ACAACTACACCATCCGCGAG 60.109 55.000 8.23 0.00 0.00 5.03
576 583 1.135315 GTACAACTACACCATCCGCGA 60.135 52.381 8.23 0.00 0.00 5.87
577 584 1.274596 GTACAACTACACCATCCGCG 58.725 55.000 0.00 0.00 0.00 6.46
578 585 1.997606 GTGTACAACTACACCATCCGC 59.002 52.381 0.00 0.00 44.99 5.54
586 593 2.400399 GAGCGCAAGTGTACAACTACA 58.600 47.619 11.47 0.00 38.56 2.74
587 594 1.385743 CGAGCGCAAGTGTACAACTAC 59.614 52.381 11.47 0.00 38.56 2.73
588 595 1.693467 CGAGCGCAAGTGTACAACTA 58.307 50.000 11.47 0.00 38.56 2.24
589 596 1.557443 GCGAGCGCAAGTGTACAACT 61.557 55.000 11.47 0.00 42.60 3.16
590 597 1.154654 GCGAGCGCAAGTGTACAAC 60.155 57.895 11.47 0.00 41.49 3.32
591 598 3.240203 GCGAGCGCAAGTGTACAA 58.760 55.556 11.47 0.00 41.49 2.41
601 608 4.863925 GAGGAGGAGTGCGAGCGC 62.864 72.222 8.08 8.08 42.35 5.92
602 609 4.544689 CGAGGAGGAGTGCGAGCG 62.545 72.222 0.00 0.00 0.00 5.03
603 610 3.404141 GACGAGGAGGAGTGCGAGC 62.404 68.421 0.00 0.00 0.00 5.03
604 611 2.795297 GACGAGGAGGAGTGCGAG 59.205 66.667 0.00 0.00 0.00 5.03
605 612 3.125573 CGACGAGGAGGAGTGCGA 61.126 66.667 0.00 0.00 0.00 5.10
606 613 3.384014 GACGACGAGGAGGAGTGCG 62.384 68.421 0.00 0.00 0.00 5.34
607 614 2.486042 GACGACGAGGAGGAGTGC 59.514 66.667 0.00 0.00 0.00 4.40
608 615 3.188965 GGACGACGAGGAGGAGTG 58.811 66.667 0.00 0.00 0.00 3.51
619 626 0.449388 ATCGGAACACTACGGACGAC 59.551 55.000 0.00 0.00 32.90 4.34
620 627 2.022764 TATCGGAACACTACGGACGA 57.977 50.000 0.00 0.00 34.70 4.20
621 628 2.830772 TTATCGGAACACTACGGACG 57.169 50.000 0.00 0.00 0.00 4.79
622 629 4.276926 AGGTATTATCGGAACACTACGGAC 59.723 45.833 0.00 0.00 0.00 4.79
623 630 4.464008 AGGTATTATCGGAACACTACGGA 58.536 43.478 0.00 0.00 0.00 4.69
624 631 4.843220 AGGTATTATCGGAACACTACGG 57.157 45.455 0.00 0.00 0.00 4.02
625 632 5.798934 GCATAGGTATTATCGGAACACTACG 59.201 44.000 0.00 0.00 0.00 3.51
626 633 6.684686 TGCATAGGTATTATCGGAACACTAC 58.315 40.000 0.00 0.00 0.00 2.73
627 634 6.904463 TGCATAGGTATTATCGGAACACTA 57.096 37.500 0.00 0.00 0.00 2.74
628 635 5.801531 TGCATAGGTATTATCGGAACACT 57.198 39.130 0.00 0.00 0.00 3.55
629 636 5.163854 GCATGCATAGGTATTATCGGAACAC 60.164 44.000 14.21 0.00 0.00 3.32
630 637 4.935205 GCATGCATAGGTATTATCGGAACA 59.065 41.667 14.21 0.00 0.00 3.18
631 638 4.935205 TGCATGCATAGGTATTATCGGAAC 59.065 41.667 18.46 0.00 0.00 3.62
632 639 4.935205 GTGCATGCATAGGTATTATCGGAA 59.065 41.667 25.64 0.00 0.00 4.30
633 640 4.020662 TGTGCATGCATAGGTATTATCGGA 60.021 41.667 25.64 0.00 0.00 4.55
634 641 4.252878 TGTGCATGCATAGGTATTATCGG 58.747 43.478 25.64 0.00 0.00 4.18
635 642 5.581874 TCATGTGCATGCATAGGTATTATCG 59.418 40.000 25.64 2.94 38.65 2.92
636 643 6.820152 TCTCATGTGCATGCATAGGTATTATC 59.180 38.462 25.64 7.17 38.65 1.75
637 644 6.714278 TCTCATGTGCATGCATAGGTATTAT 58.286 36.000 25.64 0.51 38.65 1.28
638 645 6.112927 TCTCATGTGCATGCATAGGTATTA 57.887 37.500 25.64 5.85 38.65 0.98
639 646 4.976864 TCTCATGTGCATGCATAGGTATT 58.023 39.130 25.64 2.18 38.65 1.89
640 647 4.565028 CCTCTCATGTGCATGCATAGGTAT 60.565 45.833 25.64 10.65 38.65 2.73
641 648 3.244318 CCTCTCATGTGCATGCATAGGTA 60.244 47.826 25.64 14.10 38.65 3.08
642 649 2.486727 CCTCTCATGTGCATGCATAGGT 60.487 50.000 25.64 3.88 38.65 3.08
643 650 2.152016 CCTCTCATGTGCATGCATAGG 58.848 52.381 25.64 23.22 38.65 2.57
644 651 2.152016 CCCTCTCATGTGCATGCATAG 58.848 52.381 25.64 18.00 38.65 2.23
645 652 1.202842 CCCCTCTCATGTGCATGCATA 60.203 52.381 25.64 22.69 38.65 3.14
646 653 0.467474 CCCCTCTCATGTGCATGCAT 60.467 55.000 25.64 5.67 38.65 3.96
647 654 1.077285 CCCCTCTCATGTGCATGCA 60.077 57.895 18.46 18.46 38.65 3.96
648 655 1.077212 ACCCCTCTCATGTGCATGC 60.077 57.895 11.82 11.82 38.65 4.06
649 656 0.034767 ACACCCCTCTCATGTGCATG 60.035 55.000 5.86 5.86 40.09 4.06
650 657 0.254178 GACACCCCTCTCATGTGCAT 59.746 55.000 0.00 0.00 33.30 3.96
651 658 1.126948 TGACACCCCTCTCATGTGCA 61.127 55.000 0.00 0.00 33.30 4.57
652 659 0.036732 TTGACACCCCTCTCATGTGC 59.963 55.000 0.00 0.00 33.30 4.57
653 660 1.349026 ACTTGACACCCCTCTCATGTG 59.651 52.381 0.00 0.00 36.11 3.21
654 661 1.734655 ACTTGACACCCCTCTCATGT 58.265 50.000 0.00 0.00 0.00 3.21
655 662 2.834549 ACTACTTGACACCCCTCTCATG 59.165 50.000 0.00 0.00 0.00 3.07
656 663 3.191888 ACTACTTGACACCCCTCTCAT 57.808 47.619 0.00 0.00 0.00 2.90
657 664 2.696526 ACTACTTGACACCCCTCTCA 57.303 50.000 0.00 0.00 0.00 3.27
658 665 4.583907 GGTATACTACTTGACACCCCTCTC 59.416 50.000 2.25 0.00 0.00 3.20
659 666 4.016851 TGGTATACTACTTGACACCCCTCT 60.017 45.833 2.25 0.00 0.00 3.69
660 667 4.284178 TGGTATACTACTTGACACCCCTC 58.716 47.826 2.25 0.00 0.00 4.30
661 668 4.341863 TGGTATACTACTTGACACCCCT 57.658 45.455 2.25 0.00 0.00 4.79
662 669 4.040095 GGATGGTATACTACTTGACACCCC 59.960 50.000 2.25 0.00 0.00 4.95
663 670 4.900054 AGGATGGTATACTACTTGACACCC 59.100 45.833 2.25 0.00 0.00 4.61
664 671 5.278364 CGAGGATGGTATACTACTTGACACC 60.278 48.000 2.25 0.00 0.00 4.16
665 672 5.530171 TCGAGGATGGTATACTACTTGACAC 59.470 44.000 2.25 0.00 0.00 3.67
666 673 5.687780 TCGAGGATGGTATACTACTTGACA 58.312 41.667 2.25 0.00 0.00 3.58
667 674 6.294065 CCTTCGAGGATGGTATACTACTTGAC 60.294 46.154 2.25 0.00 37.67 3.18
668 675 5.768662 CCTTCGAGGATGGTATACTACTTGA 59.231 44.000 2.25 0.00 37.67 3.02
669 676 5.047943 CCCTTCGAGGATGGTATACTACTTG 60.048 48.000 2.25 0.00 37.67 3.16
670 677 5.078256 CCCTTCGAGGATGGTATACTACTT 58.922 45.833 2.25 0.00 37.67 2.24
671 678 4.508763 CCCCTTCGAGGATGGTATACTACT 60.509 50.000 2.25 0.00 37.67 2.57
672 679 3.762823 CCCCTTCGAGGATGGTATACTAC 59.237 52.174 2.25 0.00 37.67 2.73
673 680 3.400322 ACCCCTTCGAGGATGGTATACTA 59.600 47.826 6.88 0.00 37.67 1.82
674 681 2.179424 ACCCCTTCGAGGATGGTATACT 59.821 50.000 6.88 0.00 37.67 2.12
675 682 2.561858 GACCCCTTCGAGGATGGTATAC 59.438 54.545 8.36 0.00 37.67 1.47
676 683 2.178325 TGACCCCTTCGAGGATGGTATA 59.822 50.000 8.36 0.40 37.67 1.47
677 684 1.062428 TGACCCCTTCGAGGATGGTAT 60.062 52.381 8.36 0.00 37.67 2.73
678 685 0.337082 TGACCCCTTCGAGGATGGTA 59.663 55.000 8.36 0.00 37.67 3.25
679 686 0.546747 TTGACCCCTTCGAGGATGGT 60.547 55.000 8.16 8.16 37.67 3.55
680 687 0.179000 CTTGACCCCTTCGAGGATGG 59.821 60.000 0.00 0.00 37.67 3.51
681 688 0.905357 ACTTGACCCCTTCGAGGATG 59.095 55.000 0.00 0.00 39.87 3.51
682 689 0.905357 CACTTGACCCCTTCGAGGAT 59.095 55.000 0.00 0.00 39.87 3.24
683 690 0.178944 TCACTTGACCCCTTCGAGGA 60.179 55.000 0.00 0.00 39.87 3.71
684 691 0.247736 CTCACTTGACCCCTTCGAGG 59.752 60.000 0.00 0.00 39.87 4.63
685 692 0.390472 GCTCACTTGACCCCTTCGAG 60.390 60.000 0.00 0.00 41.23 4.04
686 693 1.118965 TGCTCACTTGACCCCTTCGA 61.119 55.000 0.00 0.00 0.00 3.71
687 694 0.951040 GTGCTCACTTGACCCCTTCG 60.951 60.000 0.00 0.00 0.00 3.79
688 695 0.951040 CGTGCTCACTTGACCCCTTC 60.951 60.000 0.00 0.00 0.00 3.46
689 696 1.071471 CGTGCTCACTTGACCCCTT 59.929 57.895 0.00 0.00 0.00 3.95
690 697 2.140792 ACGTGCTCACTTGACCCCT 61.141 57.895 0.00 0.00 0.00 4.79
691 698 1.961277 CACGTGCTCACTTGACCCC 60.961 63.158 0.82 0.00 32.98 4.95
692 699 0.032952 TACACGTGCTCACTTGACCC 59.967 55.000 17.22 0.00 34.99 4.46
693 700 1.860676 TTACACGTGCTCACTTGACC 58.139 50.000 17.22 0.00 34.99 4.02
694 701 3.120792 TCTTTACACGTGCTCACTTGAC 58.879 45.455 17.22 0.00 34.99 3.18
695 702 3.446310 TCTTTACACGTGCTCACTTGA 57.554 42.857 17.22 2.33 34.99 3.02
696 703 3.802139 TCTTCTTTACACGTGCTCACTTG 59.198 43.478 17.22 5.15 36.73 3.16
697 704 4.054780 TCTTCTTTACACGTGCTCACTT 57.945 40.909 17.22 0.00 0.00 3.16
698 705 3.728076 TCTTCTTTACACGTGCTCACT 57.272 42.857 17.22 0.00 0.00 3.41
699 706 3.987868 TCATCTTCTTTACACGTGCTCAC 59.012 43.478 17.22 0.00 0.00 3.51
700 707 4.251543 TCATCTTCTTTACACGTGCTCA 57.748 40.909 17.22 0.00 0.00 4.26
701 708 5.348724 TGAATCATCTTCTTTACACGTGCTC 59.651 40.000 17.22 0.00 0.00 4.26
702 709 5.120830 GTGAATCATCTTCTTTACACGTGCT 59.879 40.000 17.22 5.64 0.00 4.40
703 710 5.316770 GTGAATCATCTTCTTTACACGTGC 58.683 41.667 17.22 0.00 0.00 5.34
704 711 5.639506 AGGTGAATCATCTTCTTTACACGTG 59.360 40.000 15.48 15.48 0.00 4.49
705 712 5.794894 AGGTGAATCATCTTCTTTACACGT 58.205 37.500 0.00 0.00 0.00 4.49
706 713 6.727824 AAGGTGAATCATCTTCTTTACACG 57.272 37.500 2.36 0.00 27.16 4.49
707 714 9.994432 CATAAAGGTGAATCATCTTCTTTACAC 57.006 33.333 9.44 0.00 33.23 2.90
708 715 9.739276 ACATAAAGGTGAATCATCTTCTTTACA 57.261 29.630 9.44 0.00 33.23 2.41
712 719 9.911788 ACATACATAAAGGTGAATCATCTTCTT 57.088 29.630 9.44 0.00 33.23 2.52
713 720 9.334947 CACATACATAAAGGTGAATCATCTTCT 57.665 33.333 9.44 3.15 33.23 2.85
714 721 9.330063 TCACATACATAAAGGTGAATCATCTTC 57.670 33.333 9.44 0.00 33.23 2.87
715 722 9.685276 TTCACATACATAAAGGTGAATCATCTT 57.315 29.630 2.36 2.36 43.19 2.40
716 723 9.334947 CTTCACATACATAAAGGTGAATCATCT 57.665 33.333 6.53 0.00 45.84 2.90
717 724 9.113838 ACTTCACATACATAAAGGTGAATCATC 57.886 33.333 6.53 0.00 45.84 2.92
719 726 9.599866 CTACTTCACATACATAAAGGTGAATCA 57.400 33.333 6.53 0.00 45.84 2.57
720 727 9.817809 TCTACTTCACATACATAAAGGTGAATC 57.182 33.333 6.53 0.00 45.84 2.52
721 728 9.823647 CTCTACTTCACATACATAAAGGTGAAT 57.176 33.333 6.53 1.62 45.84 2.57
722 729 8.258007 CCTCTACTTCACATACATAAAGGTGAA 58.742 37.037 0.00 0.00 45.12 3.18
723 730 7.399191 ACCTCTACTTCACATACATAAAGGTGA 59.601 37.037 0.00 0.00 38.41 4.02
724 731 7.556844 ACCTCTACTTCACATACATAAAGGTG 58.443 38.462 0.00 0.00 31.33 4.00
725 732 7.416438 CGACCTCTACTTCACATACATAAAGGT 60.416 40.741 0.00 0.00 35.05 3.50
726 733 6.918569 CGACCTCTACTTCACATACATAAAGG 59.081 42.308 0.00 0.00 0.00 3.11
727 734 6.418226 GCGACCTCTACTTCACATACATAAAG 59.582 42.308 0.00 0.00 0.00 1.85
728 735 6.127563 TGCGACCTCTACTTCACATACATAAA 60.128 38.462 0.00 0.00 0.00 1.40
729 736 5.358725 TGCGACCTCTACTTCACATACATAA 59.641 40.000 0.00 0.00 0.00 1.90
730 737 4.885325 TGCGACCTCTACTTCACATACATA 59.115 41.667 0.00 0.00 0.00 2.29
731 738 3.699538 TGCGACCTCTACTTCACATACAT 59.300 43.478 0.00 0.00 0.00 2.29
732 739 3.086282 TGCGACCTCTACTTCACATACA 58.914 45.455 0.00 0.00 0.00 2.29
733 740 3.436496 GTGCGACCTCTACTTCACATAC 58.564 50.000 0.00 0.00 0.00 2.39
734 741 2.096980 CGTGCGACCTCTACTTCACATA 59.903 50.000 0.00 0.00 0.00 2.29
735 742 1.135373 CGTGCGACCTCTACTTCACAT 60.135 52.381 0.00 0.00 0.00 3.21
736 743 0.240145 CGTGCGACCTCTACTTCACA 59.760 55.000 0.00 0.00 0.00 3.58
737 744 0.240411 ACGTGCGACCTCTACTTCAC 59.760 55.000 0.00 0.00 0.00 3.18
738 745 0.240145 CACGTGCGACCTCTACTTCA 59.760 55.000 0.82 0.00 0.00 3.02
739 746 0.240411 ACACGTGCGACCTCTACTTC 59.760 55.000 17.22 0.00 0.00 3.01
740 747 0.240411 GACACGTGCGACCTCTACTT 59.760 55.000 17.22 0.00 0.00 2.24
741 748 0.887836 TGACACGTGCGACCTCTACT 60.888 55.000 17.22 0.00 0.00 2.57
742 749 0.728466 GTGACACGTGCGACCTCTAC 60.728 60.000 17.22 3.14 0.00 2.59
743 750 0.887836 AGTGACACGTGCGACCTCTA 60.888 55.000 17.22 0.00 0.00 2.43
744 751 1.735376 AAGTGACACGTGCGACCTCT 61.735 55.000 17.22 6.08 0.00 3.69
745 752 1.299926 AAGTGACACGTGCGACCTC 60.300 57.895 17.22 5.76 0.00 3.85
746 753 1.591594 CAAGTGACACGTGCGACCT 60.592 57.895 17.22 3.50 0.00 3.85
747 754 2.928361 CAAGTGACACGTGCGACC 59.072 61.111 17.22 3.10 0.00 4.79
748 755 2.245532 GCAAGTGACACGTGCGAC 59.754 61.111 26.66 12.48 43.01 5.19
752 759 0.588730 CGTTTGGCAAGTGACACGTG 60.589 55.000 15.48 15.48 29.05 4.49
753 760 1.711060 CCGTTTGGCAAGTGACACGT 61.711 55.000 17.13 0.00 29.05 4.49
754 761 1.010125 CCGTTTGGCAAGTGACACG 60.010 57.895 13.00 13.00 29.05 4.49
755 762 0.028902 GTCCGTTTGGCAAGTGACAC 59.971 55.000 16.20 0.00 29.05 3.67
756 763 0.107410 AGTCCGTTTGGCAAGTGACA 60.107 50.000 20.51 0.00 34.14 3.58
757 764 0.586802 GAGTCCGTTTGGCAAGTGAC 59.413 55.000 14.33 14.33 34.14 3.67
758 765 0.468226 AGAGTCCGTTTGGCAAGTGA 59.532 50.000 0.00 0.00 34.14 3.41
759 766 1.002468 CAAGAGTCCGTTTGGCAAGTG 60.002 52.381 0.00 0.00 34.14 3.16
760 767 1.308998 CAAGAGTCCGTTTGGCAAGT 58.691 50.000 0.00 0.00 34.14 3.16
761 768 0.040067 GCAAGAGTCCGTTTGGCAAG 60.040 55.000 0.00 0.00 34.14 4.01
762 769 1.452145 GGCAAGAGTCCGTTTGGCAA 61.452 55.000 11.00 0.00 45.84 4.52
763 770 1.896660 GGCAAGAGTCCGTTTGGCA 60.897 57.895 11.00 0.00 45.84 4.92
764 771 1.244019 ATGGCAAGAGTCCGTTTGGC 61.244 55.000 9.45 9.45 46.49 4.52
765 772 0.523072 CATGGCAAGAGTCCGTTTGG 59.477 55.000 0.00 0.00 0.00 3.28
766 773 1.522668 TCATGGCAAGAGTCCGTTTG 58.477 50.000 0.00 0.00 0.00 2.93
767 774 2.086869 CATCATGGCAAGAGTCCGTTT 58.913 47.619 0.00 0.00 0.00 3.60
768 775 1.278985 TCATCATGGCAAGAGTCCGTT 59.721 47.619 0.00 0.00 0.00 4.44
769 776 0.904649 TCATCATGGCAAGAGTCCGT 59.095 50.000 0.00 0.00 0.00 4.69
770 777 1.871676 CATCATCATGGCAAGAGTCCG 59.128 52.381 0.00 0.00 0.00 4.79
771 778 2.617308 CACATCATCATGGCAAGAGTCC 59.383 50.000 0.00 0.00 33.82 3.85
772 779 2.033049 GCACATCATCATGGCAAGAGTC 59.967 50.000 0.00 0.00 33.82 3.36
773 780 2.022195 GCACATCATCATGGCAAGAGT 58.978 47.619 0.00 0.00 33.82 3.24
774 781 1.002792 CGCACATCATCATGGCAAGAG 60.003 52.381 0.00 0.00 33.82 2.85
775 782 1.018910 CGCACATCATCATGGCAAGA 58.981 50.000 0.00 0.00 33.82 3.02
776 783 0.736636 ACGCACATCATCATGGCAAG 59.263 50.000 0.00 0.00 33.82 4.01
777 784 1.941975 CTACGCACATCATCATGGCAA 59.058 47.619 0.00 0.00 33.82 4.52
778 785 1.585297 CTACGCACATCATCATGGCA 58.415 50.000 0.00 0.00 33.82 4.92
779 786 0.870393 CCTACGCACATCATCATGGC 59.130 55.000 0.00 0.00 33.82 4.40
780 787 2.531522 TCCTACGCACATCATCATGG 57.468 50.000 0.00 0.00 33.82 3.66
781 788 2.159037 GCATCCTACGCACATCATCATG 59.841 50.000 0.00 0.00 35.92 3.07
782 789 2.038164 AGCATCCTACGCACATCATCAT 59.962 45.455 0.00 0.00 0.00 2.45
783 790 1.413812 AGCATCCTACGCACATCATCA 59.586 47.619 0.00 0.00 0.00 3.07
784 791 2.064762 GAGCATCCTACGCACATCATC 58.935 52.381 0.00 0.00 0.00 2.92
785 792 2.160822 GAGCATCCTACGCACATCAT 57.839 50.000 0.00 0.00 0.00 2.45
786 793 3.667448 GAGCATCCTACGCACATCA 57.333 52.632 0.00 0.00 0.00 3.07
802 809 0.534412 ACAGTCTTCCTGATGCGGAG 59.466 55.000 0.00 0.00 44.49 4.63
803 810 0.247460 CACAGTCTTCCTGATGCGGA 59.753 55.000 0.00 0.00 44.49 5.54
804 811 0.742281 CCACAGTCTTCCTGATGCGG 60.742 60.000 0.00 0.00 44.49 5.69
805 812 0.247460 TCCACAGTCTTCCTGATGCG 59.753 55.000 0.00 0.00 44.49 4.73
806 813 1.406614 CCTCCACAGTCTTCCTGATGC 60.407 57.143 0.00 0.00 44.49 3.91
807 814 2.168106 CTCCTCCACAGTCTTCCTGATG 59.832 54.545 0.00 0.00 44.49 3.07
808 815 2.465813 CTCCTCCACAGTCTTCCTGAT 58.534 52.381 0.00 0.00 44.49 2.90
809 816 1.930251 CTCCTCCACAGTCTTCCTGA 58.070 55.000 0.00 0.00 44.49 3.86
811 818 0.178921 TGCTCCTCCACAGTCTTCCT 60.179 55.000 0.00 0.00 0.00 3.36
812 819 0.248843 CTGCTCCTCCACAGTCTTCC 59.751 60.000 0.00 0.00 0.00 3.46
813 820 1.204467 CTCTGCTCCTCCACAGTCTTC 59.796 57.143 0.00 0.00 35.37 2.87
814 821 1.265236 CTCTGCTCCTCCACAGTCTT 58.735 55.000 0.00 0.00 35.37 3.01
815 822 1.257055 GCTCTGCTCCTCCACAGTCT 61.257 60.000 0.00 0.00 35.37 3.24
816 823 1.217779 GCTCTGCTCCTCCACAGTC 59.782 63.158 0.00 0.00 35.37 3.51
817 824 2.289532 GGCTCTGCTCCTCCACAGT 61.290 63.158 0.00 0.00 35.37 3.55
818 825 2.288778 TGGCTCTGCTCCTCCACAG 61.289 63.158 0.00 0.00 35.15 3.66
819 826 2.203832 TGGCTCTGCTCCTCCACA 60.204 61.111 0.00 0.00 0.00 4.17
820 827 2.267324 GTGGCTCTGCTCCTCCAC 59.733 66.667 0.00 0.00 41.66 4.02
821 828 3.385384 CGTGGCTCTGCTCCTCCA 61.385 66.667 0.00 0.00 0.00 3.86
822 829 3.071206 TCGTGGCTCTGCTCCTCC 61.071 66.667 0.00 0.00 0.00 4.30
823 830 2.183046 GTCGTGGCTCTGCTCCTC 59.817 66.667 0.00 0.00 0.00 3.71
824 831 3.753434 CGTCGTGGCTCTGCTCCT 61.753 66.667 0.00 0.00 0.00 3.69
825 832 4.803426 CCGTCGTGGCTCTGCTCC 62.803 72.222 0.00 0.00 0.00 4.70
834 841 4.873129 CATCTCCGGCCGTCGTGG 62.873 72.222 26.12 8.39 42.50 4.94
835 842 2.829043 TTTCATCTCCGGCCGTCGTG 62.829 60.000 26.12 16.65 37.11 4.35
836 843 2.558554 CTTTCATCTCCGGCCGTCGT 62.559 60.000 26.12 3.84 37.11 4.34
837 844 1.878522 CTTTCATCTCCGGCCGTCG 60.879 63.158 26.12 14.66 38.88 5.12
838 845 0.108329 TTCTTTCATCTCCGGCCGTC 60.108 55.000 26.12 0.00 0.00 4.79
839 846 0.323629 TTTCTTTCATCTCCGGCCGT 59.676 50.000 26.12 1.14 0.00 5.68
840 847 1.448985 TTTTCTTTCATCTCCGGCCG 58.551 50.000 21.04 21.04 0.00 6.13
841 848 3.081804 TCTTTTTCTTTCATCTCCGGCC 58.918 45.455 0.00 0.00 0.00 6.13
842 849 3.127721 CCTCTTTTTCTTTCATCTCCGGC 59.872 47.826 0.00 0.00 0.00 6.13
843 850 4.579869 TCCTCTTTTTCTTTCATCTCCGG 58.420 43.478 0.00 0.00 0.00 5.14
844 851 6.749923 ATTCCTCTTTTTCTTTCATCTCCG 57.250 37.500 0.00 0.00 0.00 4.63
845 852 8.800370 ACTATTCCTCTTTTTCTTTCATCTCC 57.200 34.615 0.00 0.00 0.00 3.71
846 853 8.599774 CGACTATTCCTCTTTTTCTTTCATCTC 58.400 37.037 0.00 0.00 0.00 2.75
847 854 7.065204 GCGACTATTCCTCTTTTTCTTTCATCT 59.935 37.037 0.00 0.00 0.00 2.90
848 855 7.183433 GCGACTATTCCTCTTTTTCTTTCATC 58.817 38.462 0.00 0.00 0.00 2.92
849 856 6.183360 CGCGACTATTCCTCTTTTTCTTTCAT 60.183 38.462 0.00 0.00 0.00 2.57
850 857 5.120208 CGCGACTATTCCTCTTTTTCTTTCA 59.880 40.000 0.00 0.00 0.00 2.69
851 858 5.551893 CGCGACTATTCCTCTTTTTCTTTC 58.448 41.667 0.00 0.00 0.00 2.62
852 859 4.142881 GCGCGACTATTCCTCTTTTTCTTT 60.143 41.667 12.10 0.00 0.00 2.52
853 860 3.371285 GCGCGACTATTCCTCTTTTTCTT 59.629 43.478 12.10 0.00 0.00 2.52
854 861 2.930682 GCGCGACTATTCCTCTTTTTCT 59.069 45.455 12.10 0.00 0.00 2.52
855 862 2.285084 CGCGCGACTATTCCTCTTTTTC 60.285 50.000 28.94 0.00 0.00 2.29
856 863 1.659098 CGCGCGACTATTCCTCTTTTT 59.341 47.619 28.94 0.00 0.00 1.94
857 864 1.278238 CGCGCGACTATTCCTCTTTT 58.722 50.000 28.94 0.00 0.00 2.27
858 865 0.527817 CCGCGCGACTATTCCTCTTT 60.528 55.000 34.63 0.00 0.00 2.52
859 866 1.065928 CCGCGCGACTATTCCTCTT 59.934 57.895 34.63 0.00 0.00 2.85
860 867 1.381928 TTCCGCGCGACTATTCCTCT 61.382 55.000 34.63 0.00 0.00 3.69
861 868 1.065273 TTCCGCGCGACTATTCCTC 59.935 57.895 34.63 0.00 0.00 3.71
862 869 1.226888 GTTCCGCGCGACTATTCCT 60.227 57.895 34.63 0.00 0.00 3.36
863 870 2.235699 GGTTCCGCGCGACTATTCC 61.236 63.158 34.63 19.34 0.00 3.01
864 871 0.029834 TAGGTTCCGCGCGACTATTC 59.970 55.000 34.63 15.04 0.00 1.75
865 872 0.672342 ATAGGTTCCGCGCGACTATT 59.328 50.000 34.63 16.02 0.00 1.73
866 873 0.240411 GATAGGTTCCGCGCGACTAT 59.760 55.000 34.63 28.41 0.00 2.12
867 874 1.650912 GATAGGTTCCGCGCGACTA 59.349 57.895 34.63 25.33 0.00 2.59
868 875 2.412112 GATAGGTTCCGCGCGACT 59.588 61.111 34.63 24.04 0.00 4.18
869 876 2.657620 GGATAGGTTCCGCGCGAC 60.658 66.667 34.63 22.70 33.93 5.19
876 883 3.022406 ACACGTCTACAGGATAGGTTCC 58.978 50.000 0.00 0.00 45.85 3.62
877 884 3.946558 AGACACGTCTACAGGATAGGTTC 59.053 47.826 0.00 0.00 38.35 3.62
878 885 3.946558 GAGACACGTCTACAGGATAGGTT 59.053 47.826 0.00 0.00 40.61 3.50
879 886 3.543665 GAGACACGTCTACAGGATAGGT 58.456 50.000 0.00 0.00 40.61 3.08
880 887 2.544686 CGAGACACGTCTACAGGATAGG 59.455 54.545 0.00 0.00 40.61 2.57
881 888 2.032722 GCGAGACACGTCTACAGGATAG 60.033 54.545 0.00 0.00 44.60 2.08
882 889 1.938577 GCGAGACACGTCTACAGGATA 59.061 52.381 0.00 0.00 44.60 2.59
883 890 0.733729 GCGAGACACGTCTACAGGAT 59.266 55.000 0.00 0.00 44.60 3.24
884 891 1.632948 CGCGAGACACGTCTACAGGA 61.633 60.000 0.00 0.00 44.60 3.86
885 892 1.226046 CGCGAGACACGTCTACAGG 60.226 63.158 0.00 0.00 44.60 4.00
886 893 1.863880 GCGCGAGACACGTCTACAG 60.864 63.158 12.10 0.00 44.60 2.74
887 894 2.175078 GCGCGAGACACGTCTACA 59.825 61.111 12.10 0.00 44.60 2.74
888 895 2.938002 CGCGCGAGACACGTCTAC 60.938 66.667 28.94 0.00 44.60 2.59
889 896 4.156622 CCGCGCGAGACACGTCTA 62.157 66.667 34.63 0.00 44.60 2.59
901 908 4.337060 GAAACAACCACCCCGCGC 62.337 66.667 0.00 0.00 0.00 6.86
902 909 4.020378 CGAAACAACCACCCCGCG 62.020 66.667 0.00 0.00 0.00 6.46
903 910 2.903350 ACGAAACAACCACCCCGC 60.903 61.111 0.00 0.00 0.00 6.13
904 911 1.524165 TCACGAAACAACCACCCCG 60.524 57.895 0.00 0.00 0.00 5.73
905 912 1.778027 CGTCACGAAACAACCACCCC 61.778 60.000 0.00 0.00 0.00 4.95
906 913 1.644913 CGTCACGAAACAACCACCC 59.355 57.895 0.00 0.00 0.00 4.61
907 914 1.010462 GCGTCACGAAACAACCACC 60.010 57.895 0.00 0.00 0.00 4.61
908 915 4.582452 GCGTCACGAAACAACCAC 57.418 55.556 0.00 0.00 0.00 4.16
951 958 3.767630 AACGTTTGGAGCCGGCAGT 62.768 57.895 31.54 9.09 0.00 4.40
966 973 3.426159 CGGGACTTCATGATTGGAAAACG 60.426 47.826 0.00 0.00 0.00 3.60
993 1000 3.499737 CTCCGGCACATCCAACGC 61.500 66.667 0.00 0.00 34.01 4.84
1034 1041 2.529619 GGGAGAAATGCGAGCGAGC 61.530 63.158 0.00 0.00 37.71 5.03
1035 1042 1.884926 GGGGAGAAATGCGAGCGAG 60.885 63.158 0.00 0.00 0.00 5.03
1036 1043 2.186903 GGGGAGAAATGCGAGCGA 59.813 61.111 0.00 0.00 0.00 4.93
1037 1044 1.884926 GAGGGGAGAAATGCGAGCG 60.885 63.158 0.00 0.00 0.00 5.03
1173 1194 2.111043 CGGCGGCCATGGTAGATT 59.889 61.111 20.71 0.00 0.00 2.40
1266 1287 3.787001 GAAGGGGAGCGGGTGGAG 61.787 72.222 0.00 0.00 0.00 3.86
1364 1394 1.429148 GGATGTGGAATGCGACGGAC 61.429 60.000 0.00 0.00 0.00 4.79
1797 2099 1.447489 CTGCGGCTGGACAGAGAAG 60.447 63.158 3.00 0.00 35.90 2.85
2197 2499 3.439857 TTTCCTCATCCCCTCAAACAG 57.560 47.619 0.00 0.00 0.00 3.16
2233 2535 1.206745 GACGCATACACGATCCGGTG 61.207 60.000 0.00 0.00 43.54 4.94
2301 2603 4.161001 GCATCCACCATCTCCTTCAAAATT 59.839 41.667 0.00 0.00 0.00 1.82
2838 3140 5.075493 GGTATCCATTCAGCCTTCATCATT 58.925 41.667 0.00 0.00 0.00 2.57
3187 3489 9.599322 CAGCATATCCTCGTAAACAATAAAATC 57.401 33.333 0.00 0.00 0.00 2.17
3693 3995 3.107642 ACTGCCAGTAAGTGTGTGTAC 57.892 47.619 0.00 0.00 0.00 2.90
3821 4123 1.771255 ACTGGTGCCTTCTCTCACTTT 59.229 47.619 0.00 0.00 33.91 2.66
3955 4257 8.945195 TCCCTATTCCTCGTAATACATTAGAA 57.055 34.615 0.00 0.00 0.00 2.10
3978 4280 4.694509 GCTCCTGTGATATGAATGTGATCC 59.305 45.833 0.00 0.00 0.00 3.36
3984 4286 2.735663 GCTCGCTCCTGTGATATGAATG 59.264 50.000 0.00 0.00 31.73 2.67
4128 4430 7.063544 GTCTGAACATTCCATAGTACAACAGAC 59.936 40.741 0.00 0.00 41.04 3.51
4157 4459 9.683069 GGTATTCTAAACATATTTCAAGGCATG 57.317 33.333 0.00 0.00 0.00 4.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.