Multiple sequence alignment - TraesCS5D01G265100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G265100 chr5D 100.000 3806 0 0 1 3806 369577028 369580833 0.000000e+00 7029.0
1 TraesCS5D01G265100 chr5D 97.854 466 8 2 1 465 535137684 535137220 0.000000e+00 804.0
2 TraesCS5D01G265100 chr5D 88.235 68 6 2 458 524 532274700 532274634 3.150000e-11 80.5
3 TraesCS5D01G265100 chr5B 89.966 3279 236 62 571 3803 438794893 438798124 0.000000e+00 4146.0
4 TraesCS5D01G265100 chr5A 90.466 2874 171 47 992 3801 472110648 472113482 0.000000e+00 3694.0
5 TraesCS5D01G265100 chr5A 82.729 1048 118 38 2774 3803 472115728 472116730 0.000000e+00 874.0
6 TraesCS5D01G265100 chr5A 89.376 433 36 4 568 995 472110171 472110598 1.560000e-148 536.0
7 TraesCS5D01G265100 chr5A 78.779 344 62 9 1077 1416 38790202 38790538 1.780000e-53 220.0
8 TraesCS5D01G265100 chr5A 86.667 75 7 3 458 531 66797148 66797076 3.150000e-11 80.5
9 TraesCS5D01G265100 chr3B 85.933 1699 225 13 1027 2721 166655071 166653383 0.000000e+00 1801.0
10 TraesCS5D01G265100 chr3B 91.935 62 3 2 470 530 179670100 179670040 6.770000e-13 86.1
11 TraesCS5D01G265100 chr3D 85.630 1698 232 10 1027 2721 114204803 114206491 0.000000e+00 1773.0
12 TraesCS5D01G265100 chr3D 97.629 464 10 1 2 465 101556156 101556618 0.000000e+00 795.0
13 TraesCS5D01G265100 chr3D 97.204 465 13 0 1 465 566886274 566885810 0.000000e+00 787.0
14 TraesCS5D01G265100 chr3D 90.476 63 5 1 463 524 105890098 105890160 8.760000e-12 82.4
15 TraesCS5D01G265100 chr3A 85.580 1699 231 13 1027 2721 110069489 110071177 0.000000e+00 1768.0
16 TraesCS5D01G265100 chr7D 98.280 465 8 0 1 465 184569482 184569018 0.000000e+00 815.0
17 TraesCS5D01G265100 chr7D 98.280 465 8 0 1 465 588167736 588168200 0.000000e+00 815.0
18 TraesCS5D01G265100 chr7D 97.419 465 12 0 1 465 32949895 32950359 0.000000e+00 793.0
19 TraesCS5D01G265100 chr4B 97.204 465 13 0 1 465 373775101 373775565 0.000000e+00 787.0
20 TraesCS5D01G265100 chr4B 82.853 624 76 19 700 1314 97095473 97096074 7.240000e-147 531.0
21 TraesCS5D01G265100 chr7B 96.344 465 17 0 1 465 716033381 716033845 0.000000e+00 765.0
22 TraesCS5D01G265100 chr2B 96.129 465 18 0 1 465 250701378 250700914 0.000000e+00 760.0
23 TraesCS5D01G265100 chr2B 73.209 1717 368 76 1052 2719 639027476 639025803 4.330000e-149 538.0
24 TraesCS5D01G265100 chr4A 86.151 621 54 11 710 1314 92299162 92299766 3.210000e-180 641.0
25 TraesCS5D01G265100 chr4A 87.143 70 7 2 458 526 675933980 675934048 1.130000e-10 78.7
26 TraesCS5D01G265100 chr2A 85.668 621 47 12 710 1314 523848471 523847877 1.940000e-172 616.0
27 TraesCS5D01G265100 chr2A 87.500 72 6 3 454 524 465367819 465367750 3.150000e-11 80.5
28 TraesCS5D01G265100 chr7A 82.602 615 62 24 710 1314 468325334 468324755 5.680000e-138 501.0
29 TraesCS5D01G265100 chr1A 93.103 58 3 1 467 524 577989904 577989848 2.440000e-12 84.2
30 TraesCS5D01G265100 chr4D 87.324 71 7 2 458 527 20462862 20462931 3.150000e-11 80.5
31 TraesCS5D01G265100 chr4D 88.406 69 5 3 458 524 29317102 29317169 3.150000e-11 80.5
32 TraesCS5D01G265100 chr6D 78.512 121 24 2 1361 1480 346071291 346071172 1.130000e-10 78.7
33 TraesCS5D01G265100 chr1B 85.075 67 8 2 3693 3757 553022792 553022858 2.450000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G265100 chr5D 369577028 369580833 3805 False 7029.000000 7029 100.000000 1 3806 1 chr5D.!!$F1 3805
1 TraesCS5D01G265100 chr5B 438794893 438798124 3231 False 4146.000000 4146 89.966000 571 3803 1 chr5B.!!$F1 3232
2 TraesCS5D01G265100 chr5A 472110171 472116730 6559 False 1701.333333 3694 87.523667 568 3803 3 chr5A.!!$F2 3235
3 TraesCS5D01G265100 chr3B 166653383 166655071 1688 True 1801.000000 1801 85.933000 1027 2721 1 chr3B.!!$R1 1694
4 TraesCS5D01G265100 chr3D 114204803 114206491 1688 False 1773.000000 1773 85.630000 1027 2721 1 chr3D.!!$F3 1694
5 TraesCS5D01G265100 chr3A 110069489 110071177 1688 False 1768.000000 1768 85.580000 1027 2721 1 chr3A.!!$F1 1694
6 TraesCS5D01G265100 chr4B 97095473 97096074 601 False 531.000000 531 82.853000 700 1314 1 chr4B.!!$F1 614
7 TraesCS5D01G265100 chr2B 639025803 639027476 1673 True 538.000000 538 73.209000 1052 2719 1 chr2B.!!$R2 1667
8 TraesCS5D01G265100 chr4A 92299162 92299766 604 False 641.000000 641 86.151000 710 1314 1 chr4A.!!$F1 604
9 TraesCS5D01G265100 chr2A 523847877 523848471 594 True 616.000000 616 85.668000 710 1314 1 chr2A.!!$R2 604
10 TraesCS5D01G265100 chr7A 468324755 468325334 579 True 501.000000 501 82.602000 710 1314 1 chr7A.!!$R1 604

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
70 71 0.094216 CATGCTGACGTCTCGCTTTG 59.906 55.0 23.8 18.56 0.00 2.77 F
359 360 0.166379 TTTCGTTACGCCGCAAATCC 59.834 50.0 0.0 0.00 0.00 3.01 F
363 364 0.315869 GTTACGCCGCAAATCCGATG 60.316 55.0 0.0 0.00 0.00 3.84 F
372 373 0.461870 CAAATCCGATGTCGCCTCCA 60.462 55.0 0.0 0.00 38.18 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1774 1844 2.112297 GAACGGGGTCAGGTTGCA 59.888 61.111 0.00 0.00 0.00 4.08 R
2241 2317 2.167918 GACAAGAACGCGACGCAC 59.832 61.111 21.35 10.39 0.00 5.34 R
2256 2332 3.973267 GAGCACGTCGAGGCTGGAC 62.973 68.421 18.49 18.49 41.22 4.02 R
2895 2986 6.071672 TGCCACTTACTTATTTTGCTGCAATA 60.072 34.615 16.77 12.08 0.00 1.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.376808 GATGATCTCTACCCATGCGG 57.623 55.000 0.00 0.00 37.81 5.69
27 28 3.399046 ACCCATGCGGTGCTTCTA 58.601 55.556 5.20 0.00 46.09 2.10
28 29 1.078426 ACCCATGCGGTGCTTCTAC 60.078 57.895 5.20 0.00 46.09 2.59
29 30 1.078497 CCCATGCGGTGCTTCTACA 60.078 57.895 0.00 0.00 0.00 2.74
30 31 1.369091 CCCATGCGGTGCTTCTACAC 61.369 60.000 0.00 0.00 39.94 2.90
31 32 1.695893 CCATGCGGTGCTTCTACACG 61.696 60.000 0.00 0.00 41.65 4.49
32 33 2.100631 ATGCGGTGCTTCTACACGC 61.101 57.895 0.00 0.00 41.65 5.34
33 34 2.736995 GCGGTGCTTCTACACGCA 60.737 61.111 0.00 0.00 41.65 5.24
34 35 2.730672 GCGGTGCTTCTACACGCAG 61.731 63.158 0.00 0.00 41.65 5.18
49 50 4.335647 CAGTGGCCCGGTTGCTCT 62.336 66.667 0.00 0.00 0.00 4.09
50 51 4.021925 AGTGGCCCGGTTGCTCTC 62.022 66.667 0.00 0.00 0.00 3.20
53 54 4.115199 GGCCCGGTTGCTCTCCAT 62.115 66.667 0.00 0.00 0.00 3.41
54 55 2.825836 GCCCGGTTGCTCTCCATG 60.826 66.667 0.00 0.00 0.00 3.66
55 56 2.825836 CCCGGTTGCTCTCCATGC 60.826 66.667 0.00 0.00 0.00 4.06
56 57 2.270205 CCGGTTGCTCTCCATGCT 59.730 61.111 0.00 0.00 0.00 3.79
57 58 2.110967 CCGGTTGCTCTCCATGCTG 61.111 63.158 0.00 0.00 0.00 4.41
58 59 1.078918 CGGTTGCTCTCCATGCTGA 60.079 57.895 0.00 0.00 0.00 4.26
59 60 1.364626 CGGTTGCTCTCCATGCTGAC 61.365 60.000 0.00 0.00 0.00 3.51
60 61 1.364626 GGTTGCTCTCCATGCTGACG 61.365 60.000 0.00 0.00 0.00 4.35
61 62 0.671781 GTTGCTCTCCATGCTGACGT 60.672 55.000 0.00 0.00 0.00 4.34
62 63 0.390340 TTGCTCTCCATGCTGACGTC 60.390 55.000 9.11 9.11 0.00 4.34
63 64 1.253593 TGCTCTCCATGCTGACGTCT 61.254 55.000 17.92 0.00 0.00 4.18
64 65 0.527385 GCTCTCCATGCTGACGTCTC 60.527 60.000 17.92 9.16 0.00 3.36
65 66 0.248417 CTCTCCATGCTGACGTCTCG 60.248 60.000 17.92 9.01 0.00 4.04
66 67 1.875813 CTCCATGCTGACGTCTCGC 60.876 63.158 17.92 18.63 0.00 5.03
67 68 2.182791 CCATGCTGACGTCTCGCT 59.817 61.111 23.80 11.81 0.00 4.93
68 69 1.446792 CCATGCTGACGTCTCGCTT 60.447 57.895 23.80 17.63 0.00 4.68
69 70 1.016130 CCATGCTGACGTCTCGCTTT 61.016 55.000 23.80 13.18 0.00 3.51
70 71 0.094216 CATGCTGACGTCTCGCTTTG 59.906 55.000 23.80 18.56 0.00 2.77
71 72 1.016130 ATGCTGACGTCTCGCTTTGG 61.016 55.000 23.80 5.44 0.00 3.28
72 73 3.016474 GCTGACGTCTCGCTTTGGC 62.016 63.158 17.92 4.67 0.00 4.52
73 74 1.664649 CTGACGTCTCGCTTTGGCA 60.665 57.895 17.92 0.00 38.60 4.92
74 75 1.891060 CTGACGTCTCGCTTTGGCAC 61.891 60.000 17.92 0.00 38.60 5.01
75 76 3.000080 GACGTCTCGCTTTGGCACG 62.000 63.158 8.70 0.00 39.93 5.34
76 77 4.430423 CGTCTCGCTTTGGCACGC 62.430 66.667 0.00 0.00 38.60 5.34
77 78 3.044305 GTCTCGCTTTGGCACGCT 61.044 61.111 6.42 0.00 38.60 5.07
78 79 2.738521 TCTCGCTTTGGCACGCTC 60.739 61.111 6.42 0.00 38.60 5.03
79 80 4.139420 CTCGCTTTGGCACGCTCG 62.139 66.667 6.42 0.00 38.60 5.03
80 81 4.961511 TCGCTTTGGCACGCTCGT 62.962 61.111 6.42 0.00 38.60 4.18
81 82 4.430423 CGCTTTGGCACGCTCGTC 62.430 66.667 6.42 0.00 38.60 4.20
82 83 3.044305 GCTTTGGCACGCTCGTCT 61.044 61.111 0.00 0.00 38.54 4.18
83 84 3.016474 GCTTTGGCACGCTCGTCTC 62.016 63.158 0.00 0.00 38.54 3.36
84 85 2.720758 CTTTGGCACGCTCGTCTCG 61.721 63.158 0.00 0.00 0.00 4.04
85 86 4.717629 TTGGCACGCTCGTCTCGG 62.718 66.667 0.00 0.00 0.00 4.63
88 89 4.400109 GCACGCTCGTCTCGGTCA 62.400 66.667 0.00 0.00 0.00 4.02
89 90 2.485582 CACGCTCGTCTCGGTCAT 59.514 61.111 0.00 0.00 0.00 3.06
90 91 1.154016 CACGCTCGTCTCGGTCATT 60.154 57.895 0.00 0.00 0.00 2.57
91 92 1.134530 CACGCTCGTCTCGGTCATTC 61.135 60.000 0.00 0.00 0.00 2.67
92 93 1.586564 CGCTCGTCTCGGTCATTCC 60.587 63.158 0.00 0.00 0.00 3.01
112 113 4.395080 CGCCGACGCTCTTCATAA 57.605 55.556 0.00 0.00 0.00 1.90
113 114 2.660944 CGCCGACGCTCTTCATAAA 58.339 52.632 0.00 0.00 0.00 1.40
114 115 0.996462 CGCCGACGCTCTTCATAAAA 59.004 50.000 0.00 0.00 0.00 1.52
115 116 1.593006 CGCCGACGCTCTTCATAAAAT 59.407 47.619 0.00 0.00 0.00 1.82
116 117 2.030457 CGCCGACGCTCTTCATAAAATT 59.970 45.455 0.00 0.00 0.00 1.82
117 118 3.485216 CGCCGACGCTCTTCATAAAATTT 60.485 43.478 0.00 0.00 0.00 1.82
118 119 4.412207 GCCGACGCTCTTCATAAAATTTT 58.588 39.130 8.75 8.75 0.00 1.82
119 120 4.262976 GCCGACGCTCTTCATAAAATTTTG 59.737 41.667 13.76 0.00 0.00 2.44
120 121 5.627172 CCGACGCTCTTCATAAAATTTTGA 58.373 37.500 13.76 0.92 0.00 2.69
121 122 5.734498 CCGACGCTCTTCATAAAATTTTGAG 59.266 40.000 13.76 11.38 0.00 3.02
122 123 5.225949 CGACGCTCTTCATAAAATTTTGAGC 59.774 40.000 21.53 21.53 41.12 4.26
123 124 6.012658 ACGCTCTTCATAAAATTTTGAGCA 57.987 33.333 26.66 7.14 43.66 4.26
124 125 5.858581 ACGCTCTTCATAAAATTTTGAGCAC 59.141 36.000 26.66 9.94 43.66 4.40
125 126 6.088824 CGCTCTTCATAAAATTTTGAGCACT 58.911 36.000 26.66 2.28 43.66 4.40
126 127 6.583806 CGCTCTTCATAAAATTTTGAGCACTT 59.416 34.615 26.66 1.67 43.66 3.16
127 128 7.115378 CGCTCTTCATAAAATTTTGAGCACTTT 59.885 33.333 26.66 1.07 43.66 2.66
128 129 8.768019 GCTCTTCATAAAATTTTGAGCACTTTT 58.232 29.630 24.39 0.00 43.18 2.27
130 131 9.260002 TCTTCATAAAATTTTGAGCACTTTTCC 57.740 29.630 13.76 0.00 0.00 3.13
131 132 7.961325 TCATAAAATTTTGAGCACTTTTCCC 57.039 32.000 13.76 0.00 0.00 3.97
132 133 7.734942 TCATAAAATTTTGAGCACTTTTCCCT 58.265 30.769 13.76 0.00 0.00 4.20
133 134 8.210265 TCATAAAATTTTGAGCACTTTTCCCTT 58.790 29.630 13.76 0.00 0.00 3.95
134 135 8.839343 CATAAAATTTTGAGCACTTTTCCCTTT 58.161 29.630 13.76 0.00 0.00 3.11
135 136 7.701539 AAAATTTTGAGCACTTTTCCCTTTT 57.298 28.000 1.75 0.00 0.00 2.27
136 137 6.925610 AATTTTGAGCACTTTTCCCTTTTC 57.074 33.333 0.00 0.00 0.00 2.29
137 138 5.413309 TTTTGAGCACTTTTCCCTTTTCA 57.587 34.783 0.00 0.00 0.00 2.69
138 139 5.612725 TTTGAGCACTTTTCCCTTTTCAT 57.387 34.783 0.00 0.00 0.00 2.57
139 140 4.589216 TGAGCACTTTTCCCTTTTCATG 57.411 40.909 0.00 0.00 0.00 3.07
140 141 3.960102 TGAGCACTTTTCCCTTTTCATGT 59.040 39.130 0.00 0.00 0.00 3.21
141 142 5.136828 TGAGCACTTTTCCCTTTTCATGTA 58.863 37.500 0.00 0.00 0.00 2.29
142 143 5.596361 TGAGCACTTTTCCCTTTTCATGTAA 59.404 36.000 0.00 0.00 0.00 2.41
143 144 6.267471 TGAGCACTTTTCCCTTTTCATGTAAT 59.733 34.615 0.00 0.00 0.00 1.89
144 145 7.450014 TGAGCACTTTTCCCTTTTCATGTAATA 59.550 33.333 0.00 0.00 0.00 0.98
145 146 8.189119 AGCACTTTTCCCTTTTCATGTAATAA 57.811 30.769 0.00 0.00 0.00 1.40
146 147 8.646900 AGCACTTTTCCCTTTTCATGTAATAAA 58.353 29.630 0.00 0.00 0.00 1.40
147 148 9.435688 GCACTTTTCCCTTTTCATGTAATAAAT 57.564 29.630 0.00 0.00 0.00 1.40
153 154 8.292444 TCCCTTTTCATGTAATAAATCAGTGG 57.708 34.615 0.00 0.00 0.00 4.00
154 155 6.980397 CCCTTTTCATGTAATAAATCAGTGGC 59.020 38.462 0.00 0.00 0.00 5.01
155 156 7.147846 CCCTTTTCATGTAATAAATCAGTGGCT 60.148 37.037 0.00 0.00 0.00 4.75
156 157 7.917505 CCTTTTCATGTAATAAATCAGTGGCTC 59.082 37.037 0.00 0.00 0.00 4.70
157 158 7.936496 TTTCATGTAATAAATCAGTGGCTCA 57.064 32.000 0.00 0.00 0.00 4.26
158 159 8.523915 TTTCATGTAATAAATCAGTGGCTCAT 57.476 30.769 0.00 0.00 0.00 2.90
159 160 9.625747 TTTCATGTAATAAATCAGTGGCTCATA 57.374 29.630 0.00 0.00 0.00 2.15
160 161 8.607441 TCATGTAATAAATCAGTGGCTCATAC 57.393 34.615 0.00 0.00 0.00 2.39
161 162 8.432013 TCATGTAATAAATCAGTGGCTCATACT 58.568 33.333 0.00 0.00 0.00 2.12
162 163 9.060347 CATGTAATAAATCAGTGGCTCATACTT 57.940 33.333 0.00 0.00 0.00 2.24
163 164 8.437360 TGTAATAAATCAGTGGCTCATACTTG 57.563 34.615 0.00 0.00 0.00 3.16
164 165 8.046708 TGTAATAAATCAGTGGCTCATACTTGT 58.953 33.333 0.00 0.00 0.00 3.16
165 166 7.559590 AATAAATCAGTGGCTCATACTTGTC 57.440 36.000 0.00 0.00 0.00 3.18
166 167 4.558226 AATCAGTGGCTCATACTTGTCA 57.442 40.909 0.00 0.00 0.00 3.58
167 168 4.767578 ATCAGTGGCTCATACTTGTCAT 57.232 40.909 0.00 0.00 0.00 3.06
168 169 3.865446 TCAGTGGCTCATACTTGTCATG 58.135 45.455 0.00 0.00 0.00 3.07
169 170 2.353889 CAGTGGCTCATACTTGTCATGC 59.646 50.000 0.00 0.00 0.00 4.06
170 171 2.238144 AGTGGCTCATACTTGTCATGCT 59.762 45.455 0.00 0.00 0.00 3.79
171 172 3.012518 GTGGCTCATACTTGTCATGCTT 58.987 45.455 0.00 0.00 0.00 3.91
172 173 3.011818 TGGCTCATACTTGTCATGCTTG 58.988 45.455 0.00 0.00 0.00 4.01
173 174 2.223433 GGCTCATACTTGTCATGCTTGC 60.223 50.000 0.00 0.00 0.00 4.01
174 175 2.223433 GCTCATACTTGTCATGCTTGCC 60.223 50.000 0.00 0.00 0.00 4.52
175 176 2.009051 TCATACTTGTCATGCTTGCCG 58.991 47.619 0.00 0.00 0.00 5.69
176 177 0.734889 ATACTTGTCATGCTTGCCGC 59.265 50.000 0.00 0.00 39.77 6.53
184 185 4.732568 TGCTTGCCGCATAGGAAA 57.267 50.000 0.00 0.00 45.47 3.13
185 186 2.954161 TGCTTGCCGCATAGGAAAA 58.046 47.368 0.00 0.00 45.47 2.29
186 187 0.525761 TGCTTGCCGCATAGGAAAAC 59.474 50.000 0.00 0.00 45.47 2.43
187 188 0.525761 GCTTGCCGCATAGGAAAACA 59.474 50.000 0.00 0.00 45.00 2.83
188 189 1.067915 GCTTGCCGCATAGGAAAACAA 60.068 47.619 0.00 0.00 45.00 2.83
189 190 2.867429 CTTGCCGCATAGGAAAACAAG 58.133 47.619 0.00 0.00 45.00 3.16
190 191 1.904287 TGCCGCATAGGAAAACAAGT 58.096 45.000 0.00 0.00 45.00 3.16
191 192 2.235016 TGCCGCATAGGAAAACAAGTT 58.765 42.857 0.00 0.00 45.00 2.66
192 193 2.227865 TGCCGCATAGGAAAACAAGTTC 59.772 45.455 0.00 0.00 45.00 3.01
193 194 2.727916 GCCGCATAGGAAAACAAGTTCG 60.728 50.000 0.00 0.00 45.00 3.95
194 195 2.482721 CCGCATAGGAAAACAAGTTCGT 59.517 45.455 0.00 0.00 45.00 3.85
195 196 3.424433 CCGCATAGGAAAACAAGTTCGTC 60.424 47.826 0.00 0.00 45.00 4.20
196 197 3.432252 CGCATAGGAAAACAAGTTCGTCT 59.568 43.478 0.00 0.00 0.00 4.18
197 198 4.624024 CGCATAGGAAAACAAGTTCGTCTA 59.376 41.667 0.00 0.00 0.00 2.59
198 199 5.291128 CGCATAGGAAAACAAGTTCGTCTAT 59.709 40.000 0.00 0.00 0.00 1.98
199 200 6.508088 CGCATAGGAAAACAAGTTCGTCTATC 60.508 42.308 0.00 0.00 0.00 2.08
200 201 6.508088 GCATAGGAAAACAAGTTCGTCTATCG 60.508 42.308 0.00 0.00 41.41 2.92
201 202 4.879598 AGGAAAACAAGTTCGTCTATCGT 58.120 39.130 0.00 0.00 40.80 3.73
202 203 5.295152 AGGAAAACAAGTTCGTCTATCGTT 58.705 37.500 0.00 0.00 40.80 3.85
203 204 5.756833 AGGAAAACAAGTTCGTCTATCGTTT 59.243 36.000 0.00 0.00 40.80 3.60
204 205 6.259387 AGGAAAACAAGTTCGTCTATCGTTTT 59.741 34.615 0.00 0.00 40.80 2.43
205 206 6.572621 GGAAAACAAGTTCGTCTATCGTTTTC 59.427 38.462 20.34 20.34 40.80 2.29
206 207 6.839820 AAACAAGTTCGTCTATCGTTTTCT 57.160 33.333 0.00 0.00 40.80 2.52
207 208 6.839820 AACAAGTTCGTCTATCGTTTTCTT 57.160 33.333 0.00 0.00 40.80 2.52
208 209 6.449448 ACAAGTTCGTCTATCGTTTTCTTC 57.551 37.500 0.00 0.00 40.80 2.87
209 210 5.981315 ACAAGTTCGTCTATCGTTTTCTTCA 59.019 36.000 0.00 0.00 40.80 3.02
210 211 6.645415 ACAAGTTCGTCTATCGTTTTCTTCAT 59.355 34.615 0.00 0.00 40.80 2.57
211 212 6.872670 AGTTCGTCTATCGTTTTCTTCATC 57.127 37.500 0.00 0.00 40.80 2.92
212 213 6.622549 AGTTCGTCTATCGTTTTCTTCATCT 58.377 36.000 0.00 0.00 40.80 2.90
213 214 7.091443 AGTTCGTCTATCGTTTTCTTCATCTT 58.909 34.615 0.00 0.00 40.80 2.40
214 215 7.273815 AGTTCGTCTATCGTTTTCTTCATCTTC 59.726 37.037 0.00 0.00 40.80 2.87
215 216 6.617879 TCGTCTATCGTTTTCTTCATCTTCA 58.382 36.000 0.00 0.00 40.80 3.02
216 217 7.258441 TCGTCTATCGTTTTCTTCATCTTCAT 58.742 34.615 0.00 0.00 40.80 2.57
217 218 7.432545 TCGTCTATCGTTTTCTTCATCTTCATC 59.567 37.037 0.00 0.00 40.80 2.92
218 219 7.220875 CGTCTATCGTTTTCTTCATCTTCATCA 59.779 37.037 0.00 0.00 34.52 3.07
219 220 8.873830 GTCTATCGTTTTCTTCATCTTCATCAA 58.126 33.333 0.00 0.00 0.00 2.57
220 221 9.605275 TCTATCGTTTTCTTCATCTTCATCAAT 57.395 29.630 0.00 0.00 0.00 2.57
222 223 8.906636 ATCGTTTTCTTCATCTTCATCAATTG 57.093 30.769 0.00 0.00 0.00 2.32
223 224 6.803320 TCGTTTTCTTCATCTTCATCAATTGC 59.197 34.615 0.00 0.00 0.00 3.56
224 225 6.805271 CGTTTTCTTCATCTTCATCAATTGCT 59.195 34.615 0.00 0.00 0.00 3.91
225 226 7.964559 CGTTTTCTTCATCTTCATCAATTGCTA 59.035 33.333 0.00 0.00 0.00 3.49
226 227 9.070149 GTTTTCTTCATCTTCATCAATTGCTAC 57.930 33.333 0.00 0.00 0.00 3.58
227 228 8.571461 TTTCTTCATCTTCATCAATTGCTACT 57.429 30.769 0.00 0.00 0.00 2.57
228 229 8.571461 TTCTTCATCTTCATCAATTGCTACTT 57.429 30.769 0.00 0.00 0.00 2.24
229 230 8.571461 TCTTCATCTTCATCAATTGCTACTTT 57.429 30.769 0.00 0.00 0.00 2.66
230 231 9.017509 TCTTCATCTTCATCAATTGCTACTTTT 57.982 29.630 0.00 0.00 0.00 2.27
231 232 9.286946 CTTCATCTTCATCAATTGCTACTTTTC 57.713 33.333 0.00 0.00 0.00 2.29
232 233 7.765307 TCATCTTCATCAATTGCTACTTTTCC 58.235 34.615 0.00 0.00 0.00 3.13
233 234 6.515272 TCTTCATCAATTGCTACTTTTCCC 57.485 37.500 0.00 0.00 0.00 3.97
234 235 6.248433 TCTTCATCAATTGCTACTTTTCCCT 58.752 36.000 0.00 0.00 0.00 4.20
235 236 6.721208 TCTTCATCAATTGCTACTTTTCCCTT 59.279 34.615 0.00 0.00 0.00 3.95
236 237 6.916360 TCATCAATTGCTACTTTTCCCTTT 57.084 33.333 0.00 0.00 0.00 3.11
237 238 6.690530 TCATCAATTGCTACTTTTCCCTTTG 58.309 36.000 0.00 0.00 0.00 2.77
238 239 6.493115 TCATCAATTGCTACTTTTCCCTTTGA 59.507 34.615 0.00 0.00 0.00 2.69
239 240 6.916360 TCAATTGCTACTTTTCCCTTTGAT 57.084 33.333 0.00 0.00 0.00 2.57
240 241 8.469200 CATCAATTGCTACTTTTCCCTTTGATA 58.531 33.333 0.00 0.00 31.92 2.15
241 242 8.593945 TCAATTGCTACTTTTCCCTTTGATAT 57.406 30.769 0.00 0.00 0.00 1.63
242 243 9.034800 TCAATTGCTACTTTTCCCTTTGATATT 57.965 29.630 0.00 0.00 0.00 1.28
247 248 9.693739 TGCTACTTTTCCCTTTGATATTATTCA 57.306 29.630 0.00 0.00 0.00 2.57
256 257 9.645128 TCCCTTTGATATTATTCATTGTGATGT 57.355 29.630 0.00 0.00 34.77 3.06
272 273 2.220653 ATGTTTGGACATCCCCAGTG 57.779 50.000 0.00 0.00 42.83 3.66
273 274 0.539438 TGTTTGGACATCCCCAGTGC 60.539 55.000 0.00 0.00 37.53 4.40
274 275 1.076549 TTTGGACATCCCCAGTGCC 59.923 57.895 0.00 0.00 37.53 5.01
275 276 1.434513 TTTGGACATCCCCAGTGCCT 61.435 55.000 0.00 0.00 37.53 4.75
276 277 0.548926 TTGGACATCCCCAGTGCCTA 60.549 55.000 0.00 0.00 37.53 3.93
277 278 0.982852 TGGACATCCCCAGTGCCTAG 60.983 60.000 0.00 0.00 34.29 3.02
278 279 1.147153 GACATCCCCAGTGCCTAGC 59.853 63.158 0.00 0.00 0.00 3.42
279 280 1.616327 ACATCCCCAGTGCCTAGCA 60.616 57.895 0.00 0.00 35.60 3.49
280 281 1.207488 ACATCCCCAGTGCCTAGCAA 61.207 55.000 0.00 0.00 41.47 3.91
281 282 0.184451 CATCCCCAGTGCCTAGCAAT 59.816 55.000 0.00 0.00 41.47 3.56
282 283 0.929244 ATCCCCAGTGCCTAGCAATT 59.071 50.000 0.00 0.00 41.47 2.32
283 284 0.255890 TCCCCAGTGCCTAGCAATTC 59.744 55.000 0.00 0.00 41.47 2.17
284 285 1.097547 CCCCAGTGCCTAGCAATTCG 61.098 60.000 0.00 0.00 41.47 3.34
285 286 1.097547 CCCAGTGCCTAGCAATTCGG 61.098 60.000 0.00 0.00 41.47 4.30
286 287 1.097547 CCAGTGCCTAGCAATTCGGG 61.098 60.000 0.00 0.00 41.47 5.14
287 288 0.392998 CAGTGCCTAGCAATTCGGGT 60.393 55.000 0.00 0.00 41.47 5.28
288 289 0.328258 AGTGCCTAGCAATTCGGGTT 59.672 50.000 0.00 0.00 41.47 4.11
289 290 1.173913 GTGCCTAGCAATTCGGGTTT 58.826 50.000 0.00 0.00 41.47 3.27
290 291 2.026636 AGTGCCTAGCAATTCGGGTTTA 60.027 45.455 0.00 0.00 41.47 2.01
291 292 2.949644 GTGCCTAGCAATTCGGGTTTAT 59.050 45.455 0.00 0.00 41.47 1.40
292 293 3.003378 GTGCCTAGCAATTCGGGTTTATC 59.997 47.826 0.00 0.00 41.47 1.75
293 294 3.211045 GCCTAGCAATTCGGGTTTATCA 58.789 45.455 0.00 0.00 0.00 2.15
294 295 3.821033 GCCTAGCAATTCGGGTTTATCAT 59.179 43.478 0.00 0.00 0.00 2.45
295 296 5.001232 GCCTAGCAATTCGGGTTTATCATA 58.999 41.667 0.00 0.00 0.00 2.15
296 297 5.648092 GCCTAGCAATTCGGGTTTATCATAT 59.352 40.000 0.00 0.00 0.00 1.78
297 298 6.151144 GCCTAGCAATTCGGGTTTATCATATT 59.849 38.462 0.00 0.00 0.00 1.28
298 299 7.335924 GCCTAGCAATTCGGGTTTATCATATTA 59.664 37.037 0.00 0.00 0.00 0.98
299 300 8.665685 CCTAGCAATTCGGGTTTATCATATTAC 58.334 37.037 0.00 0.00 0.00 1.89
300 301 7.448748 AGCAATTCGGGTTTATCATATTACC 57.551 36.000 0.00 0.00 0.00 2.85
301 302 7.231467 AGCAATTCGGGTTTATCATATTACCT 58.769 34.615 0.00 0.00 0.00 3.08
302 303 7.724061 AGCAATTCGGGTTTATCATATTACCTT 59.276 33.333 0.00 0.00 0.00 3.50
303 304 7.807907 GCAATTCGGGTTTATCATATTACCTTG 59.192 37.037 0.00 0.00 0.00 3.61
304 305 8.846211 CAATTCGGGTTTATCATATTACCTTGT 58.154 33.333 0.00 0.00 0.00 3.16
305 306 7.795482 TTCGGGTTTATCATATTACCTTGTG 57.205 36.000 0.00 0.00 0.00 3.33
306 307 7.127012 TCGGGTTTATCATATTACCTTGTGA 57.873 36.000 0.00 0.00 0.00 3.58
307 308 7.741785 TCGGGTTTATCATATTACCTTGTGAT 58.258 34.615 0.00 0.00 35.62 3.06
308 309 8.215050 TCGGGTTTATCATATTACCTTGTGATT 58.785 33.333 0.00 0.00 33.65 2.57
309 310 8.846211 CGGGTTTATCATATTACCTTGTGATTT 58.154 33.333 0.00 0.00 33.65 2.17
324 325 9.696917 ACCTTGTGATTTTAGATGATTTTTCAC 57.303 29.630 0.00 0.00 34.33 3.18
325 326 9.695526 CCTTGTGATTTTAGATGATTTTTCACA 57.304 29.630 0.00 0.00 40.11 3.58
335 336 9.695526 TTAGATGATTTTTCACACTTCATTTGG 57.304 29.630 0.00 0.00 0.00 3.28
336 337 7.954835 AGATGATTTTTCACACTTCATTTGGA 58.045 30.769 0.00 0.00 0.00 3.53
337 338 7.869429 AGATGATTTTTCACACTTCATTTGGAC 59.131 33.333 0.00 0.00 0.00 4.02
338 339 7.111247 TGATTTTTCACACTTCATTTGGACT 57.889 32.000 0.00 0.00 0.00 3.85
339 340 7.555087 TGATTTTTCACACTTCATTTGGACTT 58.445 30.769 0.00 0.00 0.00 3.01
340 341 8.040132 TGATTTTTCACACTTCATTTGGACTTT 58.960 29.630 0.00 0.00 0.00 2.66
341 342 8.791327 ATTTTTCACACTTCATTTGGACTTTT 57.209 26.923 0.00 0.00 0.00 2.27
342 343 8.614469 TTTTTCACACTTCATTTGGACTTTTT 57.386 26.923 0.00 0.00 0.00 1.94
343 344 7.826260 TTTCACACTTCATTTGGACTTTTTC 57.174 32.000 0.00 0.00 0.00 2.29
344 345 5.577835 TCACACTTCATTTGGACTTTTTCG 58.422 37.500 0.00 0.00 0.00 3.46
345 346 5.124776 TCACACTTCATTTGGACTTTTTCGT 59.875 36.000 0.00 0.00 0.00 3.85
346 347 5.804979 CACACTTCATTTGGACTTTTTCGTT 59.195 36.000 0.00 0.00 0.00 3.85
347 348 6.970043 CACACTTCATTTGGACTTTTTCGTTA 59.030 34.615 0.00 0.00 0.00 3.18
348 349 6.970613 ACACTTCATTTGGACTTTTTCGTTAC 59.029 34.615 0.00 0.00 0.00 2.50
349 350 6.140108 CACTTCATTTGGACTTTTTCGTTACG 59.860 38.462 0.00 0.00 0.00 3.18
350 351 4.529446 TCATTTGGACTTTTTCGTTACGC 58.471 39.130 0.00 0.00 0.00 4.42
351 352 3.337301 TTTGGACTTTTTCGTTACGCC 57.663 42.857 0.00 0.00 0.00 5.68
352 353 0.860533 TGGACTTTTTCGTTACGCCG 59.139 50.000 0.00 0.00 0.00 6.46
353 354 0.451628 GGACTTTTTCGTTACGCCGC 60.452 55.000 0.00 0.00 0.00 6.53
354 355 0.232816 GACTTTTTCGTTACGCCGCA 59.767 50.000 0.00 0.00 0.00 5.69
355 356 0.656785 ACTTTTTCGTTACGCCGCAA 59.343 45.000 0.00 0.00 0.00 4.85
356 357 1.063764 ACTTTTTCGTTACGCCGCAAA 59.936 42.857 0.00 0.00 0.00 3.68
357 358 2.287129 ACTTTTTCGTTACGCCGCAAAT 60.287 40.909 0.00 0.00 0.00 2.32
358 359 1.953113 TTTTCGTTACGCCGCAAATC 58.047 45.000 0.00 0.00 0.00 2.17
359 360 0.166379 TTTCGTTACGCCGCAAATCC 59.834 50.000 0.00 0.00 0.00 3.01
360 361 1.957711 TTCGTTACGCCGCAAATCCG 61.958 55.000 0.00 0.00 0.00 4.18
361 362 2.446253 CGTTACGCCGCAAATCCGA 61.446 57.895 0.00 0.00 0.00 4.55
362 363 1.758319 CGTTACGCCGCAAATCCGAT 61.758 55.000 0.00 0.00 0.00 4.18
363 364 0.315869 GTTACGCCGCAAATCCGATG 60.316 55.000 0.00 0.00 0.00 3.84
364 365 0.741574 TTACGCCGCAAATCCGATGT 60.742 50.000 0.00 0.00 0.00 3.06
365 366 1.149361 TACGCCGCAAATCCGATGTC 61.149 55.000 0.00 0.00 0.00 3.06
366 367 2.324477 GCCGCAAATCCGATGTCG 59.676 61.111 0.00 0.00 39.44 4.35
367 368 2.324477 CCGCAAATCCGATGTCGC 59.676 61.111 0.00 0.00 38.18 5.19
368 369 2.324477 CGCAAATCCGATGTCGCC 59.676 61.111 0.00 0.00 38.18 5.54
369 370 2.173669 CGCAAATCCGATGTCGCCT 61.174 57.895 0.00 0.00 38.18 5.52
370 371 1.643832 GCAAATCCGATGTCGCCTC 59.356 57.895 0.00 0.00 38.18 4.70
371 372 1.776034 GCAAATCCGATGTCGCCTCC 61.776 60.000 0.00 0.00 38.18 4.30
372 373 0.461870 CAAATCCGATGTCGCCTCCA 60.462 55.000 0.00 0.00 38.18 3.86
373 374 0.462047 AAATCCGATGTCGCCTCCAC 60.462 55.000 0.00 0.00 38.18 4.02
374 375 2.311688 AATCCGATGTCGCCTCCACC 62.312 60.000 0.00 0.00 38.18 4.61
375 376 4.530857 CCGATGTCGCCTCCACCC 62.531 72.222 0.00 0.00 38.18 4.61
376 377 3.461773 CGATGTCGCCTCCACCCT 61.462 66.667 0.00 0.00 0.00 4.34
377 378 2.501610 GATGTCGCCTCCACCCTC 59.498 66.667 0.00 0.00 0.00 4.30
378 379 3.083997 ATGTCGCCTCCACCCTCC 61.084 66.667 0.00 0.00 0.00 4.30
379 380 3.924013 ATGTCGCCTCCACCCTCCA 62.924 63.158 0.00 0.00 0.00 3.86
380 381 4.083862 GTCGCCTCCACCCTCCAC 62.084 72.222 0.00 0.00 0.00 4.02
381 382 4.316823 TCGCCTCCACCCTCCACT 62.317 66.667 0.00 0.00 0.00 4.00
382 383 3.775654 CGCCTCCACCCTCCACTC 61.776 72.222 0.00 0.00 0.00 3.51
383 384 2.607750 GCCTCCACCCTCCACTCA 60.608 66.667 0.00 0.00 0.00 3.41
384 385 1.997874 GCCTCCACCCTCCACTCAT 60.998 63.158 0.00 0.00 0.00 2.90
385 386 1.566298 GCCTCCACCCTCCACTCATT 61.566 60.000 0.00 0.00 0.00 2.57
386 387 0.995024 CCTCCACCCTCCACTCATTT 59.005 55.000 0.00 0.00 0.00 2.32
387 388 1.355720 CCTCCACCCTCCACTCATTTT 59.644 52.381 0.00 0.00 0.00 1.82
388 389 2.576191 CCTCCACCCTCCACTCATTTTA 59.424 50.000 0.00 0.00 0.00 1.52
389 390 3.203040 CCTCCACCCTCCACTCATTTTAT 59.797 47.826 0.00 0.00 0.00 1.40
390 391 4.202441 CTCCACCCTCCACTCATTTTATG 58.798 47.826 0.00 0.00 0.00 1.90
391 392 2.689983 CCACCCTCCACTCATTTTATGC 59.310 50.000 0.00 0.00 0.00 3.14
392 393 2.689983 CACCCTCCACTCATTTTATGCC 59.310 50.000 0.00 0.00 0.00 4.40
393 394 2.582636 ACCCTCCACTCATTTTATGCCT 59.417 45.455 0.00 0.00 0.00 4.75
394 395 3.785887 ACCCTCCACTCATTTTATGCCTA 59.214 43.478 0.00 0.00 0.00 3.93
395 396 4.416848 ACCCTCCACTCATTTTATGCCTAT 59.583 41.667 0.00 0.00 0.00 2.57
396 397 4.763793 CCCTCCACTCATTTTATGCCTATG 59.236 45.833 0.00 0.00 0.00 2.23
397 398 5.380043 CCTCCACTCATTTTATGCCTATGT 58.620 41.667 0.00 0.00 0.00 2.29
398 399 5.471456 CCTCCACTCATTTTATGCCTATGTC 59.529 44.000 0.00 0.00 0.00 3.06
399 400 6.000246 TCCACTCATTTTATGCCTATGTCA 58.000 37.500 0.00 0.00 0.00 3.58
400 401 6.422333 TCCACTCATTTTATGCCTATGTCAA 58.578 36.000 0.00 0.00 0.00 3.18
401 402 6.318648 TCCACTCATTTTATGCCTATGTCAAC 59.681 38.462 0.00 0.00 0.00 3.18
402 403 6.095300 CCACTCATTTTATGCCTATGTCAACA 59.905 38.462 0.00 0.00 0.00 3.33
403 404 6.968904 CACTCATTTTATGCCTATGTCAACAC 59.031 38.462 0.00 0.00 0.00 3.32
404 405 6.095440 ACTCATTTTATGCCTATGTCAACACC 59.905 38.462 0.00 0.00 0.00 4.16
405 406 5.359576 TCATTTTATGCCTATGTCAACACCC 59.640 40.000 0.00 0.00 0.00 4.61
406 407 4.308526 TTTATGCCTATGTCAACACCCA 57.691 40.909 0.00 0.00 0.00 4.51
407 408 4.518278 TTATGCCTATGTCAACACCCAT 57.482 40.909 0.00 0.00 0.00 4.00
408 409 2.897271 TGCCTATGTCAACACCCATT 57.103 45.000 0.00 0.00 0.00 3.16
409 410 3.168035 TGCCTATGTCAACACCCATTT 57.832 42.857 0.00 0.00 0.00 2.32
410 411 3.505386 TGCCTATGTCAACACCCATTTT 58.495 40.909 0.00 0.00 0.00 1.82
411 412 3.509575 TGCCTATGTCAACACCCATTTTC 59.490 43.478 0.00 0.00 0.00 2.29
412 413 3.509575 GCCTATGTCAACACCCATTTTCA 59.490 43.478 0.00 0.00 0.00 2.69
413 414 4.160252 GCCTATGTCAACACCCATTTTCAT 59.840 41.667 0.00 0.00 0.00 2.57
414 415 5.679638 GCCTATGTCAACACCCATTTTCATC 60.680 44.000 0.00 0.00 0.00 2.92
415 416 3.913548 TGTCAACACCCATTTTCATCG 57.086 42.857 0.00 0.00 0.00 3.84
416 417 2.030363 TGTCAACACCCATTTTCATCGC 60.030 45.455 0.00 0.00 0.00 4.58
417 418 2.030363 GTCAACACCCATTTTCATCGCA 60.030 45.455 0.00 0.00 0.00 5.10
418 419 2.030363 TCAACACCCATTTTCATCGCAC 60.030 45.455 0.00 0.00 0.00 5.34
419 420 0.887933 ACACCCATTTTCATCGCACC 59.112 50.000 0.00 0.00 0.00 5.01
420 421 0.887247 CACCCATTTTCATCGCACCA 59.113 50.000 0.00 0.00 0.00 4.17
421 422 1.477700 CACCCATTTTCATCGCACCAT 59.522 47.619 0.00 0.00 0.00 3.55
422 423 2.094078 CACCCATTTTCATCGCACCATT 60.094 45.455 0.00 0.00 0.00 3.16
423 424 2.094078 ACCCATTTTCATCGCACCATTG 60.094 45.455 0.00 0.00 0.00 2.82
424 425 1.928503 CCATTTTCATCGCACCATTGC 59.071 47.619 0.00 0.00 46.21 3.56
435 436 3.581024 GCACCATTGCTCATCTTCAAA 57.419 42.857 0.00 0.00 46.17 2.69
436 437 3.248266 GCACCATTGCTCATCTTCAAAC 58.752 45.455 0.00 0.00 46.17 2.93
437 438 3.841643 CACCATTGCTCATCTTCAAACC 58.158 45.455 0.00 0.00 0.00 3.27
438 439 2.489329 ACCATTGCTCATCTTCAAACCG 59.511 45.455 0.00 0.00 0.00 4.44
439 440 2.749076 CCATTGCTCATCTTCAAACCGA 59.251 45.455 0.00 0.00 0.00 4.69
440 441 3.379372 CCATTGCTCATCTTCAAACCGAT 59.621 43.478 0.00 0.00 0.00 4.18
441 442 4.576053 CCATTGCTCATCTTCAAACCGATA 59.424 41.667 0.00 0.00 0.00 2.92
442 443 5.066375 CCATTGCTCATCTTCAAACCGATAA 59.934 40.000 0.00 0.00 0.00 1.75
443 444 5.545658 TTGCTCATCTTCAAACCGATAAC 57.454 39.130 0.00 0.00 0.00 1.89
444 445 3.616821 TGCTCATCTTCAAACCGATAACG 59.383 43.478 0.00 0.00 39.43 3.18
462 463 8.543071 CGATAACGGAAAAGAATTTGATAACC 57.457 34.615 0.00 0.00 35.36 2.85
463 464 8.395633 CGATAACGGAAAAGAATTTGATAACCT 58.604 33.333 0.00 0.00 35.36 3.50
464 465 9.717892 GATAACGGAAAAGAATTTGATAACCTC 57.282 33.333 0.00 0.00 39.02 3.85
465 466 7.519032 AACGGAAAAGAATTTGATAACCTCA 57.481 32.000 0.00 0.00 39.02 3.86
466 467 7.145932 ACGGAAAAGAATTTGATAACCTCAG 57.854 36.000 0.00 0.00 39.02 3.35
467 468 6.715264 ACGGAAAAGAATTTGATAACCTCAGT 59.285 34.615 0.00 0.00 39.02 3.41
468 469 7.881232 ACGGAAAAGAATTTGATAACCTCAGTA 59.119 33.333 0.00 0.00 39.02 2.74
469 470 8.893727 CGGAAAAGAATTTGATAACCTCAGTAT 58.106 33.333 0.00 0.00 39.02 2.12
521 522 9.780186 AAGATTTATATTTAGAAACGGAGGGAG 57.220 33.333 0.00 0.00 0.00 4.30
522 523 8.935741 AGATTTATATTTAGAAACGGAGGGAGT 58.064 33.333 0.00 0.00 0.00 3.85
524 525 9.993454 ATTTATATTTAGAAACGGAGGGAGTAC 57.007 33.333 0.00 0.00 0.00 2.73
525 526 8.773033 TTATATTTAGAAACGGAGGGAGTACT 57.227 34.615 0.00 0.00 0.00 2.73
526 527 7.672122 ATATTTAGAAACGGAGGGAGTACTT 57.328 36.000 0.00 0.00 0.00 2.24
527 528 8.773033 ATATTTAGAAACGGAGGGAGTACTTA 57.227 34.615 0.00 0.00 0.00 2.24
528 529 6.521151 TTTAGAAACGGAGGGAGTACTTAG 57.479 41.667 0.00 0.00 0.00 2.18
529 530 4.044946 AGAAACGGAGGGAGTACTTAGT 57.955 45.455 0.00 0.00 0.00 2.24
530 531 3.762823 AGAAACGGAGGGAGTACTTAGTG 59.237 47.826 0.00 0.00 0.00 2.74
531 532 2.140839 ACGGAGGGAGTACTTAGTGG 57.859 55.000 0.00 0.00 0.00 4.00
532 533 0.745468 CGGAGGGAGTACTTAGTGGC 59.255 60.000 0.00 0.00 0.00 5.01
533 534 1.861982 GGAGGGAGTACTTAGTGGCA 58.138 55.000 0.00 0.00 0.00 4.92
534 535 1.757699 GGAGGGAGTACTTAGTGGCAG 59.242 57.143 0.00 0.00 0.00 4.85
535 536 2.623502 GGAGGGAGTACTTAGTGGCAGA 60.624 54.545 0.00 0.00 0.00 4.26
536 537 2.691011 GAGGGAGTACTTAGTGGCAGAG 59.309 54.545 0.00 0.00 0.00 3.35
537 538 1.757699 GGGAGTACTTAGTGGCAGAGG 59.242 57.143 0.00 0.00 0.00 3.69
538 539 2.623502 GGGAGTACTTAGTGGCAGAGGA 60.624 54.545 0.00 0.00 0.00 3.71
539 540 2.691011 GGAGTACTTAGTGGCAGAGGAG 59.309 54.545 0.00 0.00 0.00 3.69
540 541 2.100087 GAGTACTTAGTGGCAGAGGAGC 59.900 54.545 0.00 0.00 0.00 4.70
541 542 1.103803 TACTTAGTGGCAGAGGAGCG 58.896 55.000 0.00 0.00 34.64 5.03
542 543 1.520342 CTTAGTGGCAGAGGAGCGC 60.520 63.158 0.00 0.00 34.64 5.92
543 544 1.954362 CTTAGTGGCAGAGGAGCGCT 61.954 60.000 11.27 11.27 34.64 5.92
544 545 2.230994 TTAGTGGCAGAGGAGCGCTG 62.231 60.000 18.48 0.53 34.50 5.18
551 552 4.863925 GAGGAGCGCTGCCTCGAC 62.864 72.222 28.31 14.89 42.22 4.20
554 555 4.427661 GAGCGCTGCCTCGACTGT 62.428 66.667 18.48 0.00 0.00 3.55
555 556 3.052620 GAGCGCTGCCTCGACTGTA 62.053 63.158 18.48 0.00 0.00 2.74
556 557 2.580867 GCGCTGCCTCGACTGTAG 60.581 66.667 0.00 0.00 0.00 2.74
557 558 2.580867 CGCTGCCTCGACTGTAGC 60.581 66.667 9.42 9.42 0.00 3.58
558 559 2.202810 GCTGCCTCGACTGTAGCC 60.203 66.667 8.54 0.00 0.00 3.93
559 560 3.006756 GCTGCCTCGACTGTAGCCA 62.007 63.158 8.54 0.00 0.00 4.75
560 561 1.153745 CTGCCTCGACTGTAGCCAC 60.154 63.158 0.00 0.00 0.00 5.01
561 562 1.599606 CTGCCTCGACTGTAGCCACT 61.600 60.000 0.00 0.00 0.00 4.00
562 563 1.153745 GCCTCGACTGTAGCCACTG 60.154 63.158 0.00 0.00 0.00 3.66
563 564 1.878656 GCCTCGACTGTAGCCACTGT 61.879 60.000 0.00 0.00 39.31 3.55
564 565 0.603569 CCTCGACTGTAGCCACTGTT 59.396 55.000 0.00 0.00 37.01 3.16
565 566 1.000955 CCTCGACTGTAGCCACTGTTT 59.999 52.381 0.00 0.00 37.01 2.83
566 567 2.548067 CCTCGACTGTAGCCACTGTTTT 60.548 50.000 0.00 0.00 37.01 2.43
656 658 8.976197 GCTTAGTGCCATGTTTGATGAACAGG 62.976 46.154 0.00 0.00 46.66 4.00
683 685 1.200483 CGTGGCTTCTACTGTATGCG 58.800 55.000 0.00 0.00 0.00 4.73
708 715 3.005554 GTGTCCACAAGATCACATCCTG 58.994 50.000 0.00 0.00 31.06 3.86
725 732 3.773560 TCCTGGGTATCCCTTTGTTTTG 58.226 45.455 6.38 0.00 45.70 2.44
784 791 3.791353 CCAAGAAAAACAAAGTCGTGCTC 59.209 43.478 0.00 0.00 0.00 4.26
797 804 2.029244 GTCGTGCTCGGTATGTGATTTG 59.971 50.000 8.49 0.00 37.69 2.32
814 821 3.889196 TTTGTGGTGCACGATAAAGAC 57.111 42.857 17.49 0.00 37.14 3.01
828 835 2.138656 AAAGACAGGACGGACGGACG 62.139 60.000 0.00 0.00 40.31 4.79
868 875 2.556287 CGAGTTGGCGACCAAAGC 59.444 61.111 12.01 7.19 45.73 3.51
882 893 1.946768 CCAAAGCAAGAAGACAACGGA 59.053 47.619 0.00 0.00 0.00 4.69
885 896 4.222114 CAAAGCAAGAAGACAACGGATTC 58.778 43.478 0.00 0.00 0.00 2.52
1266 1336 2.357517 CTCACGTGGCTCGGCTTT 60.358 61.111 17.00 0.00 44.69 3.51
1615 1685 2.877582 CGTTCGGCGAAGGGTACG 60.878 66.667 28.90 22.38 44.77 3.67
2895 2986 4.930963 TGTTTGACAACGAAGATGCAAAT 58.069 34.783 0.00 0.00 38.03 2.32
2928 3019 6.683974 AAATAAGTAAGTGGCAGCTATGTG 57.316 37.500 0.00 0.00 0.00 3.21
2983 3074 9.696917 ATGTCAGTCAACTGGATTTTAAATTTC 57.303 29.630 10.13 0.00 43.91 2.17
2985 3076 7.326063 GTCAGTCAACTGGATTTTAAATTTCGG 59.674 37.037 10.13 0.00 43.91 4.30
2986 3077 6.089417 CAGTCAACTGGATTTTAAATTTCGGC 59.911 38.462 2.08 0.00 40.20 5.54
2990 3081 3.855858 TGGATTTTAAATTTCGGCCAGC 58.144 40.909 2.24 0.00 0.00 4.85
2992 3083 3.368948 GGATTTTAAATTTCGGCCAGCCA 60.369 43.478 9.78 0.00 35.37 4.75
2994 3085 3.971245 TTTAAATTTCGGCCAGCCAAT 57.029 38.095 9.78 0.00 35.37 3.16
2995 3086 3.971245 TTAAATTTCGGCCAGCCAATT 57.029 38.095 9.78 5.38 35.37 2.32
2997 3088 2.385013 AATTTCGGCCAGCCAATTTC 57.615 45.000 9.78 0.00 35.37 2.17
2998 3089 0.536724 ATTTCGGCCAGCCAATTTCC 59.463 50.000 9.78 0.00 35.37 3.13
2999 3090 0.541764 TTTCGGCCAGCCAATTTCCT 60.542 50.000 9.78 0.00 35.37 3.36
3000 3091 1.250154 TTCGGCCAGCCAATTTCCTG 61.250 55.000 9.78 0.00 35.37 3.86
3008 3101 0.243636 GCCAATTTCCTGGTCGTTGG 59.756 55.000 16.73 16.73 41.67 3.77
3010 3103 1.539827 CCAATTTCCTGGTCGTTGGTC 59.460 52.381 14.33 0.00 35.68 4.02
3061 3180 4.592485 TTTGTTCTGTTTGTGGTGTGTT 57.408 36.364 0.00 0.00 0.00 3.32
3093 3213 2.336809 CCCTATCGCCGCTCACTC 59.663 66.667 0.00 0.00 0.00 3.51
3101 3221 1.079127 GCCGCTCACTCTGGCTAAA 60.079 57.895 0.00 0.00 45.40 1.85
3114 3235 2.179764 GCTAAAGCCGGCACATCAA 58.820 52.632 31.54 6.48 34.31 2.57
3117 3238 0.885196 TAAAGCCGGCACATCAAACC 59.115 50.000 31.54 0.00 0.00 3.27
3161 3283 5.104735 AGCCCATTCTGGTGTTTTGTTTTTA 60.105 36.000 0.00 0.00 35.17 1.52
3165 3287 7.928706 CCCATTCTGGTGTTTTGTTTTTACATA 59.071 33.333 0.00 0.00 35.17 2.29
3225 3355 7.778470 AATGTTTGCACTTTCCGAATTTAAA 57.222 28.000 0.00 0.00 0.00 1.52
3302 3433 5.866503 AAAAATCGTTCGCTTCTTTTCAC 57.133 34.783 0.00 0.00 0.00 3.18
3314 6699 5.743398 CGCTTCTTTTCACAAGAAATGTTCA 59.257 36.000 0.00 0.00 42.90 3.18
3427 6820 3.469739 TCCGAAAATATTAGCGGTTCCC 58.530 45.455 21.33 0.00 43.92 3.97
3451 6844 7.731556 CAATTTTTGGACGCATTTTCAAAAA 57.268 28.000 12.91 12.91 46.23 1.94
3476 6869 1.801309 TTCCCCCTTTTCAAAGCGCG 61.801 55.000 0.00 0.00 34.69 6.86
3478 6871 1.657556 CCCCTTTTCAAAGCGCGAA 59.342 52.632 12.10 0.00 34.69 4.70
3488 6881 6.814076 TTTCAAAGCGCGAATTTTCTTAAA 57.186 29.167 12.10 5.25 0.00 1.52
3516 6909 9.985318 TTGAGCACAAAATAACAATTTGAAAAG 57.015 25.926 2.79 0.00 39.56 2.27
3536 6929 7.543868 TGAAAAGCACGAAGAAATTCTGAAAAA 59.456 29.630 0.00 0.00 0.00 1.94
3540 6933 5.204833 CACGAAGAAATTCTGAAAAAGCGA 58.795 37.500 0.00 0.00 0.00 4.93
3597 6990 9.460019 AATGGAAGAAAAATTTGAAAAAGTCCA 57.540 25.926 0.00 0.00 34.94 4.02
3647 7040 6.973006 AAAAATCGCATTTTCACAATTTGC 57.027 29.167 0.00 0.00 41.30 3.68
3650 7043 2.979151 TCGCATTTTCACAATTTGCTCG 59.021 40.909 0.00 0.00 0.00 5.03
3652 7045 3.059166 GCATTTTCACAATTTGCTCGGT 58.941 40.909 0.00 0.00 0.00 4.69
3657 7050 7.062839 GCATTTTCACAATTTGCTCGGTATTTA 59.937 33.333 0.00 0.00 0.00 1.40
3658 7051 8.920665 CATTTTCACAATTTGCTCGGTATTTAA 58.079 29.630 0.00 0.00 0.00 1.52
3659 7052 8.873215 TTTTCACAATTTGCTCGGTATTTAAA 57.127 26.923 0.00 0.00 0.00 1.52
3660 7053 8.873215 TTTCACAATTTGCTCGGTATTTAAAA 57.127 26.923 0.00 0.00 0.00 1.52
3661 7054 8.873215 TTCACAATTTGCTCGGTATTTAAAAA 57.127 26.923 0.00 0.00 0.00 1.94
3662 7055 9.482627 TTCACAATTTGCTCGGTATTTAAAAAT 57.517 25.926 0.00 0.00 0.00 1.82
3663 7056 9.482627 TCACAATTTGCTCGGTATTTAAAAATT 57.517 25.926 0.00 0.00 0.00 1.82
3715 7108 6.535274 AATTCAGAAAATGCTTGTGCTTTC 57.465 33.333 0.00 0.00 40.48 2.62
3717 7110 5.008619 TCAGAAAATGCTTGTGCTTTCAA 57.991 34.783 0.00 0.00 36.45 2.69
3778 7173 8.967218 CAAAACTTATTCGATGTGTTCAAACAT 58.033 29.630 0.00 0.00 43.47 2.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.376808 CCGCATGGGTAGAGATCATC 57.623 55.000 9.14 0.00 0.00 2.92
11 12 1.078497 TGTAGAAGCACCGCATGGG 60.078 57.895 2.06 2.06 40.75 4.00
12 13 1.695893 CGTGTAGAAGCACCGCATGG 61.696 60.000 0.00 0.00 42.84 3.66
13 14 1.709760 CGTGTAGAAGCACCGCATG 59.290 57.895 0.00 0.00 36.08 4.06
14 15 2.100631 GCGTGTAGAAGCACCGCAT 61.101 57.895 0.00 0.00 38.12 4.73
15 16 2.736995 GCGTGTAGAAGCACCGCA 60.737 61.111 0.00 0.00 38.12 5.69
16 17 2.730672 CTGCGTGTAGAAGCACCGC 61.731 63.158 0.00 0.00 38.59 5.68
17 18 1.372997 ACTGCGTGTAGAAGCACCG 60.373 57.895 0.00 0.00 38.59 4.94
18 19 1.291877 CCACTGCGTGTAGAAGCACC 61.292 60.000 0.00 0.00 38.59 5.01
19 20 1.901650 GCCACTGCGTGTAGAAGCAC 61.902 60.000 0.00 0.00 38.59 4.40
20 21 1.667830 GCCACTGCGTGTAGAAGCA 60.668 57.895 0.00 0.00 41.55 3.91
21 22 2.391389 GGCCACTGCGTGTAGAAGC 61.391 63.158 0.00 0.00 38.85 3.86
22 23 1.741770 GGGCCACTGCGTGTAGAAG 60.742 63.158 4.39 0.00 38.85 2.85
23 24 2.345991 GGGCCACTGCGTGTAGAA 59.654 61.111 4.39 0.00 38.85 2.10
24 25 4.063967 CGGGCCACTGCGTGTAGA 62.064 66.667 4.39 0.00 38.85 2.59
32 33 4.335647 AGAGCAACCGGGCCACTG 62.336 66.667 6.32 0.00 0.00 3.66
33 34 4.021925 GAGAGCAACCGGGCCACT 62.022 66.667 6.32 2.98 0.00 4.00
36 37 4.115199 ATGGAGAGCAACCGGGCC 62.115 66.667 6.32 0.00 0.00 5.80
37 38 2.825836 CATGGAGAGCAACCGGGC 60.826 66.667 6.32 0.00 0.00 6.13
38 39 2.825836 GCATGGAGAGCAACCGGG 60.826 66.667 6.32 0.00 0.00 5.73
39 40 2.110967 CAGCATGGAGAGCAACCGG 61.111 63.158 0.00 0.00 0.00 5.28
40 41 1.078918 TCAGCATGGAGAGCAACCG 60.079 57.895 0.00 0.00 36.16 4.44
41 42 1.364626 CGTCAGCATGGAGAGCAACC 61.365 60.000 0.00 0.00 36.16 3.77
42 43 0.671781 ACGTCAGCATGGAGAGCAAC 60.672 55.000 0.00 0.00 36.16 4.17
43 44 0.390340 GACGTCAGCATGGAGAGCAA 60.390 55.000 11.55 0.00 36.16 3.91
44 45 1.216444 GACGTCAGCATGGAGAGCA 59.784 57.895 11.55 0.00 36.16 4.26
45 46 0.527385 GAGACGTCAGCATGGAGAGC 60.527 60.000 19.50 0.00 36.16 4.09
46 47 0.248417 CGAGACGTCAGCATGGAGAG 60.248 60.000 19.50 0.00 36.16 3.20
47 48 1.803289 CGAGACGTCAGCATGGAGA 59.197 57.895 19.50 0.00 36.16 3.71
48 49 1.875813 GCGAGACGTCAGCATGGAG 60.876 63.158 24.66 6.68 36.16 3.86
49 50 1.877576 AAGCGAGACGTCAGCATGGA 61.878 55.000 28.90 0.00 36.16 3.41
50 51 1.016130 AAAGCGAGACGTCAGCATGG 61.016 55.000 28.90 9.02 36.16 3.66
51 52 0.094216 CAAAGCGAGACGTCAGCATG 59.906 55.000 28.90 23.61 37.54 4.06
52 53 1.016130 CCAAAGCGAGACGTCAGCAT 61.016 55.000 28.90 19.35 0.00 3.79
53 54 1.664649 CCAAAGCGAGACGTCAGCA 60.665 57.895 28.90 0.00 0.00 4.41
54 55 3.016474 GCCAAAGCGAGACGTCAGC 62.016 63.158 22.95 22.95 0.00 4.26
55 56 1.664649 TGCCAAAGCGAGACGTCAG 60.665 57.895 19.50 12.41 44.31 3.51
56 57 1.954146 GTGCCAAAGCGAGACGTCA 60.954 57.895 19.50 0.00 44.31 4.35
57 58 2.853914 GTGCCAAAGCGAGACGTC 59.146 61.111 7.70 7.70 44.31 4.34
58 59 3.036084 CGTGCCAAAGCGAGACGT 61.036 61.111 0.00 0.00 44.31 4.34
59 60 4.430423 GCGTGCCAAAGCGAGACG 62.430 66.667 0.00 0.00 44.31 4.18
60 61 3.016474 GAGCGTGCCAAAGCGAGAC 62.016 63.158 0.00 0.00 44.31 3.36
61 62 2.738521 GAGCGTGCCAAAGCGAGA 60.739 61.111 0.00 0.00 44.31 4.04
62 63 4.139420 CGAGCGTGCCAAAGCGAG 62.139 66.667 0.00 0.00 44.31 5.03
63 64 4.961511 ACGAGCGTGCCAAAGCGA 62.962 61.111 0.00 0.00 44.31 4.93
64 65 4.430423 GACGAGCGTGCCAAAGCG 62.430 66.667 0.00 0.00 44.31 4.68
65 66 3.016474 GAGACGAGCGTGCCAAAGC 62.016 63.158 0.00 0.00 40.48 3.51
66 67 2.720758 CGAGACGAGCGTGCCAAAG 61.721 63.158 0.00 0.00 0.00 2.77
67 68 2.733218 CGAGACGAGCGTGCCAAA 60.733 61.111 0.00 0.00 0.00 3.28
68 69 4.717629 CCGAGACGAGCGTGCCAA 62.718 66.667 0.00 0.00 0.00 4.52
71 72 3.685214 ATGACCGAGACGAGCGTGC 62.685 63.158 0.00 0.00 0.00 5.34
72 73 1.134530 GAATGACCGAGACGAGCGTG 61.135 60.000 0.00 0.00 0.00 5.34
73 74 1.136984 GAATGACCGAGACGAGCGT 59.863 57.895 0.00 0.00 0.00 5.07
74 75 1.586564 GGAATGACCGAGACGAGCG 60.587 63.158 0.00 0.00 0.00 5.03
75 76 4.403976 GGAATGACCGAGACGAGC 57.596 61.111 0.00 0.00 0.00 5.03
95 96 0.996462 TTTTATGAAGAGCGTCGGCG 59.004 50.000 4.29 4.29 46.35 6.46
96 97 3.675467 AATTTTATGAAGAGCGTCGGC 57.325 42.857 0.00 0.00 40.37 5.54
97 98 5.627172 TCAAAATTTTATGAAGAGCGTCGG 58.373 37.500 2.44 0.00 0.00 4.79
98 99 5.225949 GCTCAAAATTTTATGAAGAGCGTCG 59.774 40.000 18.70 0.00 37.81 5.12
99 100 6.546056 GCTCAAAATTTTATGAAGAGCGTC 57.454 37.500 18.70 1.93 37.81 5.19
102 103 7.880059 AAGTGCTCAAAATTTTATGAAGAGC 57.120 32.000 23.34 23.34 45.23 4.09
104 105 9.260002 GGAAAAGTGCTCAAAATTTTATGAAGA 57.740 29.630 2.44 0.00 0.00 2.87
105 106 8.498358 GGGAAAAGTGCTCAAAATTTTATGAAG 58.502 33.333 2.44 0.94 0.00 3.02
106 107 8.210265 AGGGAAAAGTGCTCAAAATTTTATGAA 58.790 29.630 2.44 0.00 0.00 2.57
107 108 7.734942 AGGGAAAAGTGCTCAAAATTTTATGA 58.265 30.769 2.44 0.00 0.00 2.15
108 109 7.967890 AGGGAAAAGTGCTCAAAATTTTATG 57.032 32.000 2.44 0.84 0.00 1.90
109 110 8.978874 AAAGGGAAAAGTGCTCAAAATTTTAT 57.021 26.923 2.44 0.00 0.00 1.40
110 111 8.800370 AAAAGGGAAAAGTGCTCAAAATTTTA 57.200 26.923 2.44 0.00 0.00 1.52
111 112 7.392953 TGAAAAGGGAAAAGTGCTCAAAATTTT 59.607 29.630 0.00 0.00 0.00 1.82
112 113 6.883756 TGAAAAGGGAAAAGTGCTCAAAATTT 59.116 30.769 0.00 0.00 0.00 1.82
113 114 6.413892 TGAAAAGGGAAAAGTGCTCAAAATT 58.586 32.000 0.00 0.00 0.00 1.82
114 115 5.988287 TGAAAAGGGAAAAGTGCTCAAAAT 58.012 33.333 0.00 0.00 0.00 1.82
115 116 5.413309 TGAAAAGGGAAAAGTGCTCAAAA 57.587 34.783 0.00 0.00 0.00 2.44
116 117 5.104982 ACATGAAAAGGGAAAAGTGCTCAAA 60.105 36.000 0.00 0.00 0.00 2.69
117 118 4.405358 ACATGAAAAGGGAAAAGTGCTCAA 59.595 37.500 0.00 0.00 0.00 3.02
118 119 3.960102 ACATGAAAAGGGAAAAGTGCTCA 59.040 39.130 0.00 0.00 0.00 4.26
119 120 4.590850 ACATGAAAAGGGAAAAGTGCTC 57.409 40.909 0.00 0.00 0.00 4.26
120 121 6.670695 ATTACATGAAAAGGGAAAAGTGCT 57.329 33.333 0.00 0.00 0.00 4.40
121 122 8.825667 TTTATTACATGAAAAGGGAAAAGTGC 57.174 30.769 0.00 0.00 0.00 4.40
127 128 8.748412 CCACTGATTTATTACATGAAAAGGGAA 58.252 33.333 0.00 0.00 0.00 3.97
128 129 7.147915 GCCACTGATTTATTACATGAAAAGGGA 60.148 37.037 0.00 0.00 0.00 4.20
129 130 6.980397 GCCACTGATTTATTACATGAAAAGGG 59.020 38.462 0.00 0.00 0.00 3.95
130 131 7.775120 AGCCACTGATTTATTACATGAAAAGG 58.225 34.615 0.00 0.00 0.00 3.11
131 132 8.461222 TGAGCCACTGATTTATTACATGAAAAG 58.539 33.333 0.00 0.00 0.00 2.27
132 133 8.347004 TGAGCCACTGATTTATTACATGAAAA 57.653 30.769 0.00 0.00 0.00 2.29
133 134 7.936496 TGAGCCACTGATTTATTACATGAAA 57.064 32.000 0.00 0.00 0.00 2.69
134 135 9.056005 GTATGAGCCACTGATTTATTACATGAA 57.944 33.333 0.00 0.00 0.00 2.57
135 136 8.432013 AGTATGAGCCACTGATTTATTACATGA 58.568 33.333 0.00 0.00 0.00 3.07
136 137 8.613060 AGTATGAGCCACTGATTTATTACATG 57.387 34.615 0.00 0.00 0.00 3.21
137 138 9.060347 CAAGTATGAGCCACTGATTTATTACAT 57.940 33.333 0.00 0.00 0.00 2.29
138 139 8.046708 ACAAGTATGAGCCACTGATTTATTACA 58.953 33.333 0.00 0.00 0.00 2.41
139 140 8.438676 ACAAGTATGAGCCACTGATTTATTAC 57.561 34.615 0.00 0.00 0.00 1.89
140 141 8.264347 TGACAAGTATGAGCCACTGATTTATTA 58.736 33.333 0.00 0.00 0.00 0.98
141 142 7.112122 TGACAAGTATGAGCCACTGATTTATT 58.888 34.615 0.00 0.00 0.00 1.40
142 143 6.653020 TGACAAGTATGAGCCACTGATTTAT 58.347 36.000 0.00 0.00 0.00 1.40
143 144 6.048732 TGACAAGTATGAGCCACTGATTTA 57.951 37.500 0.00 0.00 0.00 1.40
144 145 4.910195 TGACAAGTATGAGCCACTGATTT 58.090 39.130 0.00 0.00 0.00 2.17
145 146 4.558226 TGACAAGTATGAGCCACTGATT 57.442 40.909 0.00 0.00 0.00 2.57
146 147 4.449131 CATGACAAGTATGAGCCACTGAT 58.551 43.478 0.00 0.00 0.00 2.90
147 148 3.865446 CATGACAAGTATGAGCCACTGA 58.135 45.455 0.00 0.00 0.00 3.41
148 149 2.353889 GCATGACAAGTATGAGCCACTG 59.646 50.000 0.00 0.00 0.00 3.66
149 150 2.238144 AGCATGACAAGTATGAGCCACT 59.762 45.455 0.00 0.00 0.00 4.00
150 151 2.636830 AGCATGACAAGTATGAGCCAC 58.363 47.619 0.00 0.00 0.00 5.01
151 152 3.011818 CAAGCATGACAAGTATGAGCCA 58.988 45.455 0.00 0.00 0.00 4.75
152 153 2.223433 GCAAGCATGACAAGTATGAGCC 60.223 50.000 0.00 0.00 0.00 4.70
153 154 2.223433 GGCAAGCATGACAAGTATGAGC 60.223 50.000 0.00 0.00 33.41 4.26
154 155 2.031314 CGGCAAGCATGACAAGTATGAG 59.969 50.000 0.00 0.00 32.33 2.90
155 156 2.009051 CGGCAAGCATGACAAGTATGA 58.991 47.619 0.00 0.00 32.33 2.15
156 157 2.463553 CGGCAAGCATGACAAGTATG 57.536 50.000 0.00 0.00 32.33 2.39
169 170 2.228822 ACTTGTTTTCCTATGCGGCAAG 59.771 45.455 6.82 5.99 36.08 4.01
170 171 2.235016 ACTTGTTTTCCTATGCGGCAA 58.765 42.857 6.82 0.00 0.00 4.52
171 172 1.904287 ACTTGTTTTCCTATGCGGCA 58.096 45.000 4.58 4.58 0.00 5.69
172 173 2.727916 CGAACTTGTTTTCCTATGCGGC 60.728 50.000 0.00 0.00 0.00 6.53
173 174 2.482721 ACGAACTTGTTTTCCTATGCGG 59.517 45.455 0.00 0.00 0.00 5.69
174 175 3.432252 AGACGAACTTGTTTTCCTATGCG 59.568 43.478 0.00 0.00 0.00 4.73
175 176 6.508088 CGATAGACGAACTTGTTTTCCTATGC 60.508 42.308 0.00 0.00 45.77 3.14
176 177 6.530534 ACGATAGACGAACTTGTTTTCCTATG 59.469 38.462 0.00 0.00 45.77 2.23
177 178 6.628185 ACGATAGACGAACTTGTTTTCCTAT 58.372 36.000 0.00 0.00 45.77 2.57
178 179 6.017400 ACGATAGACGAACTTGTTTTCCTA 57.983 37.500 0.00 0.00 45.77 2.94
179 180 4.879598 ACGATAGACGAACTTGTTTTCCT 58.120 39.130 0.00 0.00 45.77 3.36
180 181 5.587033 AACGATAGACGAACTTGTTTTCC 57.413 39.130 0.00 0.00 45.77 3.13
181 182 7.342942 AGAAAACGATAGACGAACTTGTTTTC 58.657 34.615 23.04 23.04 43.79 2.29
182 183 7.242914 AGAAAACGATAGACGAACTTGTTTT 57.757 32.000 15.72 15.72 45.77 2.43
183 184 6.839820 AGAAAACGATAGACGAACTTGTTT 57.160 33.333 0.00 0.00 45.77 2.83
184 185 6.477688 TGAAGAAAACGATAGACGAACTTGTT 59.522 34.615 0.00 0.00 45.77 2.83
185 186 5.981315 TGAAGAAAACGATAGACGAACTTGT 59.019 36.000 0.00 0.00 45.77 3.16
186 187 6.448053 TGAAGAAAACGATAGACGAACTTG 57.552 37.500 0.00 0.00 45.77 3.16
187 188 7.091443 AGATGAAGAAAACGATAGACGAACTT 58.909 34.615 0.00 0.00 45.77 2.66
188 189 6.622549 AGATGAAGAAAACGATAGACGAACT 58.377 36.000 0.00 0.00 45.77 3.01
189 190 6.872670 AGATGAAGAAAACGATAGACGAAC 57.127 37.500 0.00 0.00 45.77 3.95
190 191 7.088272 TGAAGATGAAGAAAACGATAGACGAA 58.912 34.615 0.00 0.00 45.77 3.85
191 192 6.617879 TGAAGATGAAGAAAACGATAGACGA 58.382 36.000 0.00 0.00 45.77 4.20
193 194 8.412608 TGATGAAGATGAAGAAAACGATAGAC 57.587 34.615 0.00 0.00 41.38 2.59
194 195 9.605275 ATTGATGAAGATGAAGAAAACGATAGA 57.395 29.630 0.00 0.00 41.38 1.98
196 197 9.992910 CAATTGATGAAGATGAAGAAAACGATA 57.007 29.630 0.00 0.00 0.00 2.92
197 198 7.487189 GCAATTGATGAAGATGAAGAAAACGAT 59.513 33.333 10.34 0.00 0.00 3.73
198 199 6.803320 GCAATTGATGAAGATGAAGAAAACGA 59.197 34.615 10.34 0.00 0.00 3.85
199 200 6.805271 AGCAATTGATGAAGATGAAGAAAACG 59.195 34.615 10.34 0.00 0.00 3.60
200 201 9.070149 GTAGCAATTGATGAAGATGAAGAAAAC 57.930 33.333 10.34 0.00 0.00 2.43
201 202 9.017509 AGTAGCAATTGATGAAGATGAAGAAAA 57.982 29.630 10.34 0.00 0.00 2.29
202 203 8.571461 AGTAGCAATTGATGAAGATGAAGAAA 57.429 30.769 10.34 0.00 0.00 2.52
203 204 8.571461 AAGTAGCAATTGATGAAGATGAAGAA 57.429 30.769 10.34 0.00 0.00 2.52
204 205 8.571461 AAAGTAGCAATTGATGAAGATGAAGA 57.429 30.769 10.34 0.00 0.00 2.87
205 206 9.286946 GAAAAGTAGCAATTGATGAAGATGAAG 57.713 33.333 10.34 0.00 0.00 3.02
206 207 8.246180 GGAAAAGTAGCAATTGATGAAGATGAA 58.754 33.333 10.34 0.00 0.00 2.57
207 208 7.148018 GGGAAAAGTAGCAATTGATGAAGATGA 60.148 37.037 10.34 0.00 0.00 2.92
208 209 6.976925 GGGAAAAGTAGCAATTGATGAAGATG 59.023 38.462 10.34 0.00 0.00 2.90
209 210 6.894103 AGGGAAAAGTAGCAATTGATGAAGAT 59.106 34.615 10.34 0.00 0.00 2.40
210 211 6.248433 AGGGAAAAGTAGCAATTGATGAAGA 58.752 36.000 10.34 0.00 0.00 2.87
211 212 6.521151 AGGGAAAAGTAGCAATTGATGAAG 57.479 37.500 10.34 0.00 0.00 3.02
212 213 6.916360 AAGGGAAAAGTAGCAATTGATGAA 57.084 33.333 10.34 0.00 0.00 2.57
213 214 6.493115 TCAAAGGGAAAAGTAGCAATTGATGA 59.507 34.615 10.34 0.00 0.00 2.92
214 215 6.690530 TCAAAGGGAAAAGTAGCAATTGATG 58.309 36.000 10.34 0.00 0.00 3.07
215 216 6.916360 TCAAAGGGAAAAGTAGCAATTGAT 57.084 33.333 10.34 5.28 0.00 2.57
216 217 6.916360 ATCAAAGGGAAAAGTAGCAATTGA 57.084 33.333 10.34 0.00 0.00 2.57
221 222 9.693739 TGAATAATATCAAAGGGAAAAGTAGCA 57.306 29.630 0.00 0.00 0.00 3.49
230 231 9.645128 ACATCACAATGAATAATATCAAAGGGA 57.355 29.630 0.00 0.00 36.67 4.20
254 255 0.539438 GCACTGGGGATGTCCAAACA 60.539 55.000 0.86 0.00 40.38 2.83
255 256 1.250840 GGCACTGGGGATGTCCAAAC 61.251 60.000 0.86 0.00 36.21 2.93
256 257 1.076549 GGCACTGGGGATGTCCAAA 59.923 57.895 0.86 0.00 36.21 3.28
257 258 0.548926 TAGGCACTGGGGATGTCCAA 60.549 55.000 0.86 0.00 41.52 3.53
258 259 0.982852 CTAGGCACTGGGGATGTCCA 60.983 60.000 0.86 0.00 41.52 4.02
259 260 1.832912 CTAGGCACTGGGGATGTCC 59.167 63.158 0.00 0.00 41.52 4.02
260 261 1.147153 GCTAGGCACTGGGGATGTC 59.853 63.158 0.00 0.00 41.52 3.06
261 262 1.207488 TTGCTAGGCACTGGGGATGT 61.207 55.000 0.00 0.00 41.52 3.06
262 263 0.184451 ATTGCTAGGCACTGGGGATG 59.816 55.000 0.00 0.00 41.52 3.51
263 264 0.929244 AATTGCTAGGCACTGGGGAT 59.071 50.000 0.00 0.00 41.52 3.85
264 265 0.255890 GAATTGCTAGGCACTGGGGA 59.744 55.000 0.00 0.00 41.52 4.81
265 266 1.097547 CGAATTGCTAGGCACTGGGG 61.098 60.000 0.00 0.00 41.52 4.96
266 267 1.097547 CCGAATTGCTAGGCACTGGG 61.098 60.000 0.00 0.00 41.52 4.45
267 268 1.097547 CCCGAATTGCTAGGCACTGG 61.098 60.000 0.00 0.00 41.52 4.00
268 269 0.392998 ACCCGAATTGCTAGGCACTG 60.393 55.000 0.00 0.00 41.52 3.66
269 270 0.328258 AACCCGAATTGCTAGGCACT 59.672 50.000 0.00 0.00 38.71 4.40
270 271 1.173913 AAACCCGAATTGCTAGGCAC 58.826 50.000 0.00 0.00 38.71 5.01
271 272 2.791347 TAAACCCGAATTGCTAGGCA 57.209 45.000 0.00 0.00 36.47 4.75
272 273 3.211045 TGATAAACCCGAATTGCTAGGC 58.789 45.455 0.00 0.00 0.00 3.93
273 274 7.687941 AATATGATAAACCCGAATTGCTAGG 57.312 36.000 0.00 0.00 0.00 3.02
274 275 8.665685 GGTAATATGATAAACCCGAATTGCTAG 58.334 37.037 0.00 0.00 0.00 3.42
275 276 8.380099 AGGTAATATGATAAACCCGAATTGCTA 58.620 33.333 4.31 0.00 32.10 3.49
276 277 7.231467 AGGTAATATGATAAACCCGAATTGCT 58.769 34.615 4.31 0.00 32.10 3.91
277 278 7.448748 AGGTAATATGATAAACCCGAATTGC 57.551 36.000 4.31 0.00 32.10 3.56
278 279 8.846211 ACAAGGTAATATGATAAACCCGAATTG 58.154 33.333 4.31 5.25 32.10 2.32
279 280 8.846211 CACAAGGTAATATGATAAACCCGAATT 58.154 33.333 4.31 0.00 32.10 2.17
280 281 8.215050 TCACAAGGTAATATGATAAACCCGAAT 58.785 33.333 4.31 0.00 32.10 3.34
281 282 7.566569 TCACAAGGTAATATGATAAACCCGAA 58.433 34.615 4.31 0.00 32.10 4.30
282 283 7.127012 TCACAAGGTAATATGATAAACCCGA 57.873 36.000 4.31 0.00 32.10 5.14
283 284 7.979444 ATCACAAGGTAATATGATAAACCCG 57.021 36.000 4.31 0.45 32.10 5.28
298 299 9.696917 GTGAAAAATCATCTAAAATCACAAGGT 57.303 29.630 0.00 0.00 36.75 3.50
299 300 9.695526 TGTGAAAAATCATCTAAAATCACAAGG 57.304 29.630 3.05 0.00 41.87 3.61
309 310 9.695526 CCAAATGAAGTGTGAAAAATCATCTAA 57.304 29.630 0.00 0.00 30.76 2.10
310 311 9.076781 TCCAAATGAAGTGTGAAAAATCATCTA 57.923 29.630 0.00 0.00 30.76 1.98
311 312 7.869429 GTCCAAATGAAGTGTGAAAAATCATCT 59.131 33.333 0.00 0.00 30.76 2.90
312 313 7.869429 AGTCCAAATGAAGTGTGAAAAATCATC 59.131 33.333 0.00 0.00 30.76 2.92
313 314 7.729116 AGTCCAAATGAAGTGTGAAAAATCAT 58.271 30.769 0.00 0.00 32.36 2.45
314 315 7.111247 AGTCCAAATGAAGTGTGAAAAATCA 57.889 32.000 0.00 0.00 0.00 2.57
315 316 8.424274 AAAGTCCAAATGAAGTGTGAAAAATC 57.576 30.769 0.00 0.00 0.00 2.17
316 317 8.791327 AAAAGTCCAAATGAAGTGTGAAAAAT 57.209 26.923 0.00 0.00 0.00 1.82
317 318 8.614469 AAAAAGTCCAAATGAAGTGTGAAAAA 57.386 26.923 0.00 0.00 0.00 1.94
318 319 7.062839 CGAAAAAGTCCAAATGAAGTGTGAAAA 59.937 33.333 0.00 0.00 0.00 2.29
319 320 6.529829 CGAAAAAGTCCAAATGAAGTGTGAAA 59.470 34.615 0.00 0.00 0.00 2.69
320 321 6.033341 CGAAAAAGTCCAAATGAAGTGTGAA 58.967 36.000 0.00 0.00 0.00 3.18
321 322 5.124776 ACGAAAAAGTCCAAATGAAGTGTGA 59.875 36.000 0.00 0.00 0.00 3.58
322 323 5.339990 ACGAAAAAGTCCAAATGAAGTGTG 58.660 37.500 0.00 0.00 0.00 3.82
323 324 5.576447 ACGAAAAAGTCCAAATGAAGTGT 57.424 34.783 0.00 0.00 0.00 3.55
324 325 6.140108 CGTAACGAAAAAGTCCAAATGAAGTG 59.860 38.462 0.00 0.00 0.00 3.16
325 326 6.196571 CGTAACGAAAAAGTCCAAATGAAGT 58.803 36.000 0.00 0.00 0.00 3.01
326 327 5.115021 GCGTAACGAAAAAGTCCAAATGAAG 59.885 40.000 0.00 0.00 0.00 3.02
327 328 4.971220 GCGTAACGAAAAAGTCCAAATGAA 59.029 37.500 0.00 0.00 0.00 2.57
328 329 4.529446 GCGTAACGAAAAAGTCCAAATGA 58.471 39.130 0.00 0.00 0.00 2.57
329 330 3.666797 GGCGTAACGAAAAAGTCCAAATG 59.333 43.478 0.00 0.00 0.00 2.32
330 331 3.607542 CGGCGTAACGAAAAAGTCCAAAT 60.608 43.478 0.00 0.00 35.47 2.32
331 332 2.286301 CGGCGTAACGAAAAAGTCCAAA 60.286 45.455 0.00 0.00 35.47 3.28
332 333 1.261089 CGGCGTAACGAAAAAGTCCAA 59.739 47.619 0.00 0.00 35.47 3.53
333 334 0.860533 CGGCGTAACGAAAAAGTCCA 59.139 50.000 0.00 0.00 35.47 4.02
334 335 0.451628 GCGGCGTAACGAAAAAGTCC 60.452 55.000 9.37 0.00 35.47 3.85
335 336 0.232816 TGCGGCGTAACGAAAAAGTC 59.767 50.000 9.37 0.00 35.47 3.01
336 337 0.656785 TTGCGGCGTAACGAAAAAGT 59.343 45.000 6.25 0.00 35.47 2.66
337 338 1.744374 TTTGCGGCGTAACGAAAAAG 58.256 45.000 10.62 0.00 38.36 2.27
338 339 2.308811 GATTTGCGGCGTAACGAAAAA 58.691 42.857 10.62 0.00 43.87 1.94
339 340 1.399984 GGATTTGCGGCGTAACGAAAA 60.400 47.619 10.62 0.00 44.68 2.29
340 341 0.166379 GGATTTGCGGCGTAACGAAA 59.834 50.000 10.62 0.00 35.47 3.46
341 342 1.789116 GGATTTGCGGCGTAACGAA 59.211 52.632 10.62 0.00 35.47 3.85
342 343 2.446253 CGGATTTGCGGCGTAACGA 61.446 57.895 10.62 0.00 35.47 3.85
343 344 1.758319 ATCGGATTTGCGGCGTAACG 61.758 55.000 10.62 11.28 0.00 3.18
344 345 0.315869 CATCGGATTTGCGGCGTAAC 60.316 55.000 10.62 0.00 0.00 2.50
345 346 0.741574 ACATCGGATTTGCGGCGTAA 60.742 50.000 6.25 6.25 0.00 3.18
346 347 1.149361 GACATCGGATTTGCGGCGTA 61.149 55.000 9.37 0.00 0.00 4.42
347 348 2.435938 ACATCGGATTTGCGGCGT 60.436 55.556 9.37 0.00 0.00 5.68
348 349 2.324477 GACATCGGATTTGCGGCG 59.676 61.111 0.51 0.51 0.00 6.46
349 350 2.324477 CGACATCGGATTTGCGGC 59.676 61.111 0.00 0.00 35.37 6.53
350 351 2.324477 GCGACATCGGATTTGCGG 59.676 61.111 3.08 0.00 40.23 5.69
351 352 2.094126 GAGGCGACATCGGATTTGCG 62.094 60.000 3.08 0.00 40.23 4.85
352 353 1.643832 GAGGCGACATCGGATTTGC 59.356 57.895 3.08 0.00 40.23 3.68
353 354 0.461870 TGGAGGCGACATCGGATTTG 60.462 55.000 3.08 0.00 40.23 2.32
354 355 0.462047 GTGGAGGCGACATCGGATTT 60.462 55.000 3.08 0.00 40.23 2.17
355 356 1.144057 GTGGAGGCGACATCGGATT 59.856 57.895 3.08 0.00 40.23 3.01
356 357 2.797278 GGTGGAGGCGACATCGGAT 61.797 63.158 3.08 0.00 40.23 4.18
357 358 3.458163 GGTGGAGGCGACATCGGA 61.458 66.667 3.08 0.00 40.23 4.55
358 359 4.530857 GGGTGGAGGCGACATCGG 62.531 72.222 3.08 0.00 40.23 4.18
359 360 3.432051 GAGGGTGGAGGCGACATCG 62.432 68.421 0.00 0.00 43.27 3.84
360 361 2.501610 GAGGGTGGAGGCGACATC 59.498 66.667 0.00 0.00 0.00 3.06
361 362 3.083997 GGAGGGTGGAGGCGACAT 61.084 66.667 0.00 0.00 0.00 3.06
362 363 4.631740 TGGAGGGTGGAGGCGACA 62.632 66.667 0.00 0.00 0.00 4.35
363 364 4.083862 GTGGAGGGTGGAGGCGAC 62.084 72.222 0.00 0.00 0.00 5.19
364 365 4.316823 AGTGGAGGGTGGAGGCGA 62.317 66.667 0.00 0.00 0.00 5.54
365 366 3.775654 GAGTGGAGGGTGGAGGCG 61.776 72.222 0.00 0.00 0.00 5.52
366 367 1.566298 AATGAGTGGAGGGTGGAGGC 61.566 60.000 0.00 0.00 0.00 4.70
367 368 0.995024 AAATGAGTGGAGGGTGGAGG 59.005 55.000 0.00 0.00 0.00 4.30
368 369 2.887151 AAAATGAGTGGAGGGTGGAG 57.113 50.000 0.00 0.00 0.00 3.86
369 370 3.624707 GCATAAAATGAGTGGAGGGTGGA 60.625 47.826 0.00 0.00 0.00 4.02
370 371 2.689983 GCATAAAATGAGTGGAGGGTGG 59.310 50.000 0.00 0.00 0.00 4.61
371 372 2.689983 GGCATAAAATGAGTGGAGGGTG 59.310 50.000 0.00 0.00 0.00 4.61
372 373 2.582636 AGGCATAAAATGAGTGGAGGGT 59.417 45.455 0.00 0.00 0.00 4.34
373 374 3.303351 AGGCATAAAATGAGTGGAGGG 57.697 47.619 0.00 0.00 0.00 4.30
374 375 5.380043 ACATAGGCATAAAATGAGTGGAGG 58.620 41.667 0.00 0.00 0.00 4.30
375 376 6.057533 TGACATAGGCATAAAATGAGTGGAG 58.942 40.000 0.00 0.00 0.00 3.86
376 377 6.000246 TGACATAGGCATAAAATGAGTGGA 58.000 37.500 0.00 0.00 0.00 4.02
377 378 6.095300 TGTTGACATAGGCATAAAATGAGTGG 59.905 38.462 0.00 0.00 0.00 4.00
378 379 6.968904 GTGTTGACATAGGCATAAAATGAGTG 59.031 38.462 0.00 0.00 0.00 3.51
379 380 6.095440 GGTGTTGACATAGGCATAAAATGAGT 59.905 38.462 0.00 0.00 0.00 3.41
380 381 6.460123 GGGTGTTGACATAGGCATAAAATGAG 60.460 42.308 0.00 0.00 0.00 2.90
381 382 5.359576 GGGTGTTGACATAGGCATAAAATGA 59.640 40.000 0.00 0.00 0.00 2.57
382 383 5.126869 TGGGTGTTGACATAGGCATAAAATG 59.873 40.000 0.00 0.00 0.00 2.32
383 384 5.268387 TGGGTGTTGACATAGGCATAAAAT 58.732 37.500 0.00 0.00 0.00 1.82
384 385 4.667573 TGGGTGTTGACATAGGCATAAAA 58.332 39.130 0.00 0.00 0.00 1.52
385 386 4.308526 TGGGTGTTGACATAGGCATAAA 57.691 40.909 0.00 0.00 0.00 1.40
386 387 4.518278 ATGGGTGTTGACATAGGCATAA 57.482 40.909 0.00 0.00 0.00 1.90
387 388 4.518278 AATGGGTGTTGACATAGGCATA 57.482 40.909 0.00 0.00 0.00 3.14
388 389 3.386932 AATGGGTGTTGACATAGGCAT 57.613 42.857 0.00 0.00 0.00 4.40
389 390 2.897271 AATGGGTGTTGACATAGGCA 57.103 45.000 0.00 0.00 0.00 4.75
390 391 3.509575 TGAAAATGGGTGTTGACATAGGC 59.490 43.478 0.00 0.00 0.00 3.93
391 392 5.449041 CGATGAAAATGGGTGTTGACATAGG 60.449 44.000 0.00 0.00 0.00 2.57
392 393 5.572211 CGATGAAAATGGGTGTTGACATAG 58.428 41.667 0.00 0.00 0.00 2.23
393 394 4.142491 GCGATGAAAATGGGTGTTGACATA 60.142 41.667 0.00 0.00 0.00 2.29
394 395 3.367292 GCGATGAAAATGGGTGTTGACAT 60.367 43.478 0.00 0.00 0.00 3.06
395 396 2.030363 GCGATGAAAATGGGTGTTGACA 60.030 45.455 0.00 0.00 0.00 3.58
396 397 2.030363 TGCGATGAAAATGGGTGTTGAC 60.030 45.455 0.00 0.00 0.00 3.18
397 398 2.030363 GTGCGATGAAAATGGGTGTTGA 60.030 45.455 0.00 0.00 0.00 3.18
398 399 2.327568 GTGCGATGAAAATGGGTGTTG 58.672 47.619 0.00 0.00 0.00 3.33
399 400 1.272212 GGTGCGATGAAAATGGGTGTT 59.728 47.619 0.00 0.00 0.00 3.32
400 401 0.887933 GGTGCGATGAAAATGGGTGT 59.112 50.000 0.00 0.00 0.00 4.16
401 402 0.887247 TGGTGCGATGAAAATGGGTG 59.113 50.000 0.00 0.00 0.00 4.61
402 403 1.851304 ATGGTGCGATGAAAATGGGT 58.149 45.000 0.00 0.00 0.00 4.51
403 404 2.542597 CAATGGTGCGATGAAAATGGG 58.457 47.619 0.00 0.00 0.00 4.00
404 405 1.928503 GCAATGGTGCGATGAAAATGG 59.071 47.619 0.00 0.00 41.93 3.16
416 417 3.671433 CGGTTTGAAGATGAGCAATGGTG 60.671 47.826 0.00 0.00 0.00 4.17
417 418 2.489329 CGGTTTGAAGATGAGCAATGGT 59.511 45.455 0.00 0.00 0.00 3.55
418 419 2.749076 TCGGTTTGAAGATGAGCAATGG 59.251 45.455 0.00 0.00 0.00 3.16
419 420 4.627611 ATCGGTTTGAAGATGAGCAATG 57.372 40.909 0.00 0.00 0.00 2.82
420 421 5.220662 CGTTATCGGTTTGAAGATGAGCAAT 60.221 40.000 0.00 0.00 0.00 3.56
421 422 4.092821 CGTTATCGGTTTGAAGATGAGCAA 59.907 41.667 0.00 0.00 0.00 3.91
422 423 3.616821 CGTTATCGGTTTGAAGATGAGCA 59.383 43.478 0.00 0.00 0.00 4.26
423 424 4.183539 CGTTATCGGTTTGAAGATGAGC 57.816 45.455 0.00 0.00 0.00 4.26
437 438 8.395633 AGGTTATCAAATTCTTTTCCGTTATCG 58.604 33.333 0.00 0.00 0.00 2.92
438 439 9.717892 GAGGTTATCAAATTCTTTTCCGTTATC 57.282 33.333 0.00 0.00 0.00 1.75
439 440 9.238368 TGAGGTTATCAAATTCTTTTCCGTTAT 57.762 29.630 0.00 0.00 34.02 1.89
440 441 8.624367 TGAGGTTATCAAATTCTTTTCCGTTA 57.376 30.769 0.00 0.00 34.02 3.18
441 442 7.230712 ACTGAGGTTATCAAATTCTTTTCCGTT 59.769 33.333 0.00 0.00 37.52 4.44
442 443 6.715264 ACTGAGGTTATCAAATTCTTTTCCGT 59.285 34.615 0.00 0.00 37.52 4.69
443 444 7.145932 ACTGAGGTTATCAAATTCTTTTCCG 57.854 36.000 0.00 0.00 37.52 4.30
495 496 9.780186 CTCCCTCCGTTTCTAAATATAAATCTT 57.220 33.333 0.00 0.00 0.00 2.40
496 497 8.935741 ACTCCCTCCGTTTCTAAATATAAATCT 58.064 33.333 0.00 0.00 0.00 2.40
498 499 9.993454 GTACTCCCTCCGTTTCTAAATATAAAT 57.007 33.333 0.00 0.00 0.00 1.40
499 500 9.205513 AGTACTCCCTCCGTTTCTAAATATAAA 57.794 33.333 0.00 0.00 0.00 1.40
500 501 8.773033 AGTACTCCCTCCGTTTCTAAATATAA 57.227 34.615 0.00 0.00 0.00 0.98
501 502 8.773033 AAGTACTCCCTCCGTTTCTAAATATA 57.227 34.615 0.00 0.00 0.00 0.86
502 503 7.672122 AAGTACTCCCTCCGTTTCTAAATAT 57.328 36.000 0.00 0.00 0.00 1.28
503 504 7.836183 ACTAAGTACTCCCTCCGTTTCTAAATA 59.164 37.037 0.00 0.00 0.00 1.40
504 505 6.666980 ACTAAGTACTCCCTCCGTTTCTAAAT 59.333 38.462 0.00 0.00 0.00 1.40
505 506 6.012745 ACTAAGTACTCCCTCCGTTTCTAAA 58.987 40.000 0.00 0.00 0.00 1.85
506 507 5.416952 CACTAAGTACTCCCTCCGTTTCTAA 59.583 44.000 0.00 0.00 0.00 2.10
507 508 4.946157 CACTAAGTACTCCCTCCGTTTCTA 59.054 45.833 0.00 0.00 0.00 2.10
508 509 3.762823 CACTAAGTACTCCCTCCGTTTCT 59.237 47.826 0.00 0.00 0.00 2.52
509 510 3.119209 CCACTAAGTACTCCCTCCGTTTC 60.119 52.174 0.00 0.00 0.00 2.78
510 511 2.830321 CCACTAAGTACTCCCTCCGTTT 59.170 50.000 0.00 0.00 0.00 3.60
511 512 2.454538 CCACTAAGTACTCCCTCCGTT 58.545 52.381 0.00 0.00 0.00 4.44
512 513 1.959028 GCCACTAAGTACTCCCTCCGT 60.959 57.143 0.00 0.00 0.00 4.69
513 514 0.745468 GCCACTAAGTACTCCCTCCG 59.255 60.000 0.00 0.00 0.00 4.63
514 515 1.757699 CTGCCACTAAGTACTCCCTCC 59.242 57.143 0.00 0.00 0.00 4.30
515 516 2.691011 CTCTGCCACTAAGTACTCCCTC 59.309 54.545 0.00 0.00 0.00 4.30
516 517 2.624557 CCTCTGCCACTAAGTACTCCCT 60.625 54.545 0.00 0.00 0.00 4.20
517 518 1.757699 CCTCTGCCACTAAGTACTCCC 59.242 57.143 0.00 0.00 0.00 4.30
518 519 2.691011 CTCCTCTGCCACTAAGTACTCC 59.309 54.545 0.00 0.00 0.00 3.85
519 520 2.100087 GCTCCTCTGCCACTAAGTACTC 59.900 54.545 0.00 0.00 0.00 2.59
520 521 2.104170 GCTCCTCTGCCACTAAGTACT 58.896 52.381 0.00 0.00 0.00 2.73
521 522 1.202313 CGCTCCTCTGCCACTAAGTAC 60.202 57.143 0.00 0.00 0.00 2.73
522 523 1.103803 CGCTCCTCTGCCACTAAGTA 58.896 55.000 0.00 0.00 0.00 2.24
523 524 1.893786 CGCTCCTCTGCCACTAAGT 59.106 57.895 0.00 0.00 0.00 2.24
524 525 1.520342 GCGCTCCTCTGCCACTAAG 60.520 63.158 0.00 0.00 0.00 2.18
525 526 1.984570 AGCGCTCCTCTGCCACTAA 60.985 57.895 2.64 0.00 0.00 2.24
526 527 2.363018 AGCGCTCCTCTGCCACTA 60.363 61.111 2.64 0.00 0.00 2.74
527 528 4.079850 CAGCGCTCCTCTGCCACT 62.080 66.667 7.13 0.00 0.00 4.00
532 533 4.869440 CGAGGCAGCGCTCCTCTG 62.869 72.222 33.52 26.93 46.11 3.35
534 535 4.863925 GTCGAGGCAGCGCTCCTC 62.864 72.222 30.43 30.43 45.12 3.71
537 538 2.928313 CTACAGTCGAGGCAGCGCTC 62.928 65.000 7.13 2.01 0.00 5.03
538 539 3.057547 CTACAGTCGAGGCAGCGCT 62.058 63.158 2.64 2.64 0.00 5.92
539 540 2.580867 CTACAGTCGAGGCAGCGC 60.581 66.667 0.00 0.00 0.00 5.92
540 541 2.580867 GCTACAGTCGAGGCAGCG 60.581 66.667 0.00 0.00 0.00 5.18
541 542 2.202810 GGCTACAGTCGAGGCAGC 60.203 66.667 1.45 1.45 39.24 5.25
542 543 3.288484 TGGCTACAGTCGAGGCAG 58.712 61.111 0.00 0.00 43.87 4.85
543 544 1.606601 AGTGGCTACAGTCGAGGCA 60.607 57.895 2.02 0.00 46.27 4.75
544 545 1.153745 CAGTGGCTACAGTCGAGGC 60.154 63.158 2.02 0.00 39.84 4.70
545 546 0.603569 AACAGTGGCTACAGTCGAGG 59.396 55.000 2.02 0.00 0.00 4.63
546 547 2.440539 AAACAGTGGCTACAGTCGAG 57.559 50.000 2.02 0.00 0.00 4.04
547 548 2.479837 CAAAACAGTGGCTACAGTCGA 58.520 47.619 2.02 0.00 0.00 4.20
548 549 1.069906 GCAAAACAGTGGCTACAGTCG 60.070 52.381 2.02 0.00 0.00 4.18
549 550 1.946768 TGCAAAACAGTGGCTACAGTC 59.053 47.619 2.02 0.00 0.00 3.51
550 551 1.676006 GTGCAAAACAGTGGCTACAGT 59.324 47.619 2.02 0.00 0.00 3.55
551 552 1.949525 AGTGCAAAACAGTGGCTACAG 59.050 47.619 2.02 0.00 0.00 2.74
552 553 2.051334 AGTGCAAAACAGTGGCTACA 57.949 45.000 2.02 0.00 0.00 2.74
553 554 3.119849 CCATAGTGCAAAACAGTGGCTAC 60.120 47.826 0.00 0.00 31.42 3.58
554 555 3.081061 CCATAGTGCAAAACAGTGGCTA 58.919 45.455 0.00 0.00 31.42 3.93
555 556 1.888512 CCATAGTGCAAAACAGTGGCT 59.111 47.619 0.00 0.00 31.42 4.75
556 557 2.352503 CCATAGTGCAAAACAGTGGC 57.647 50.000 0.00 0.00 31.42 5.01
557 558 1.888512 AGCCATAGTGCAAAACAGTGG 59.111 47.619 0.00 0.00 38.15 4.00
558 559 3.753272 AGTAGCCATAGTGCAAAACAGTG 59.247 43.478 0.00 0.00 32.79 3.66
559 560 3.753272 CAGTAGCCATAGTGCAAAACAGT 59.247 43.478 0.00 0.00 35.57 3.55
560 561 3.753272 ACAGTAGCCATAGTGCAAAACAG 59.247 43.478 0.00 0.00 36.00 3.16
561 562 3.750371 ACAGTAGCCATAGTGCAAAACA 58.250 40.909 0.00 0.00 36.00 2.83
562 563 4.475944 CAACAGTAGCCATAGTGCAAAAC 58.524 43.478 0.00 0.00 36.00 2.43
563 564 3.057596 GCAACAGTAGCCATAGTGCAAAA 60.058 43.478 0.00 0.00 36.00 2.44
564 565 2.487762 GCAACAGTAGCCATAGTGCAAA 59.512 45.455 0.00 0.00 36.00 3.68
565 566 2.083774 GCAACAGTAGCCATAGTGCAA 58.916 47.619 0.00 0.00 36.00 4.08
566 567 1.278985 AGCAACAGTAGCCATAGTGCA 59.721 47.619 0.00 0.00 36.00 4.57
607 609 2.203209 GGGGCCAGGATTAGCGTG 60.203 66.667 4.39 0.00 0.00 5.34
656 658 1.274447 AGTAGAAGCCACGGGTTACAC 59.726 52.381 0.00 2.34 35.84 2.90
683 685 1.160137 GTGATCTTGTGGACACAGCC 58.840 55.000 5.21 0.00 42.94 4.85
725 732 1.929836 CTTGCTCTGACGATTGGCTAC 59.070 52.381 0.00 0.00 0.00 3.58
784 791 1.809547 TGCACCACAAATCACATACCG 59.190 47.619 0.00 0.00 0.00 4.02
797 804 1.732259 CCTGTCTTTATCGTGCACCAC 59.268 52.381 12.15 0.00 0.00 4.16
814 821 4.112341 GTCCGTCCGTCCGTCCTG 62.112 72.222 0.00 0.00 0.00 3.86
832 839 2.494918 CATCGTCGTGGACTCCCC 59.505 66.667 0.00 0.00 0.00 4.81
959 973 4.662961 TCTGTCCGCGCACAGGTG 62.663 66.667 28.68 5.92 43.59 4.00
960 974 4.664677 GTCTGTCCGCGCACAGGT 62.665 66.667 28.68 0.00 43.59 4.00
975 989 1.269988 TGAGCACAGCTTCACTCTGTC 60.270 52.381 7.84 0.00 42.38 3.51
1600 1670 2.568090 GTCGTACCCTTCGCCGAA 59.432 61.111 0.00 0.00 0.00 4.30
1615 1685 2.413765 GATGGGGTCGAGCTCGTC 59.586 66.667 33.33 27.89 40.80 4.20
1774 1844 2.112297 GAACGGGGTCAGGTTGCA 59.888 61.111 0.00 0.00 0.00 4.08
2241 2317 2.167918 GACAAGAACGCGACGCAC 59.832 61.111 21.35 10.39 0.00 5.34
2256 2332 3.973267 GAGCACGTCGAGGCTGGAC 62.973 68.421 18.49 18.49 41.22 4.02
2895 2986 6.071672 TGCCACTTACTTATTTTGCTGCAATA 60.072 34.615 16.77 12.08 0.00 1.90
2908 2999 3.517901 ACCACATAGCTGCCACTTACTTA 59.482 43.478 0.00 0.00 0.00 2.24
2928 3019 3.874392 AGTGCTAATGAAAATGCCACC 57.126 42.857 0.00 0.00 0.00 4.61
2983 3074 2.713967 CCAGGAAATTGGCTGGCCG 61.714 63.158 7.14 0.00 39.42 6.13
2985 3076 1.893062 GACCAGGAAATTGGCTGGC 59.107 57.895 0.00 0.00 42.18 4.85
2986 3077 0.609131 ACGACCAGGAAATTGGCTGG 60.609 55.000 0.00 0.00 42.18 4.85
2990 3081 1.539827 GACCAACGACCAGGAAATTGG 59.460 52.381 15.03 15.03 44.48 3.16
2992 3083 2.951229 AGACCAACGACCAGGAAATT 57.049 45.000 0.00 0.00 0.00 1.82
2994 3085 2.294074 CAAAGACCAACGACCAGGAAA 58.706 47.619 0.00 0.00 0.00 3.13
2995 3086 1.961793 CAAAGACCAACGACCAGGAA 58.038 50.000 0.00 0.00 0.00 3.36
2997 3088 0.535102 AGCAAAGACCAACGACCAGG 60.535 55.000 0.00 0.00 0.00 4.45
2998 3089 0.868406 GAGCAAAGACCAACGACCAG 59.132 55.000 0.00 0.00 0.00 4.00
2999 3090 0.468226 AGAGCAAAGACCAACGACCA 59.532 50.000 0.00 0.00 0.00 4.02
3000 3091 0.868406 CAGAGCAAAGACCAACGACC 59.132 55.000 0.00 0.00 0.00 4.79
3008 3101 2.093467 GCACGAATCTCAGAGCAAAGAC 59.907 50.000 0.00 0.00 0.00 3.01
3010 3103 2.344950 AGCACGAATCTCAGAGCAAAG 58.655 47.619 0.00 0.00 0.00 2.77
3043 3162 4.303282 ACAAAACACACCACAAACAGAAC 58.697 39.130 0.00 0.00 0.00 3.01
3061 3180 3.759618 CGATAGGGGTTAGCCAAAACAAA 59.240 43.478 1.94 0.00 36.17 2.83
3098 3218 0.885196 GGTTTGATGTGCCGGCTTTA 59.115 50.000 29.70 14.27 0.00 1.85
3101 3221 3.055719 CGGTTTGATGTGCCGGCT 61.056 61.111 29.70 7.33 41.60 5.52
3108 3229 2.359478 GGCGTCCCGGTTTGATGT 60.359 61.111 0.00 0.00 0.00 3.06
3197 3327 5.462034 TTCGGAAAGTGCAAACATTTTTG 57.538 34.783 0.00 0.00 44.42 2.44
3272 3403 8.568732 AAGAAGCGAACGATTTTTAAAATTCA 57.431 26.923 18.16 0.00 0.00 2.57
3286 3417 3.585748 TCTTGTGAAAAGAAGCGAACG 57.414 42.857 0.00 0.00 0.00 3.95
3400 6793 7.166970 GGAACCGCTAATATTTTCGGAAATTTC 59.833 37.037 25.28 19.15 44.23 2.17
3401 6794 6.976349 GGAACCGCTAATATTTTCGGAAATTT 59.024 34.615 25.28 14.21 44.23 1.82
3405 6798 3.878699 GGGAACCGCTAATATTTTCGGAA 59.121 43.478 25.28 0.00 44.23 4.30
3427 6820 7.731556 TTTTTGAAAATGCGTCCAAAAATTG 57.268 28.000 16.10 0.00 41.00 2.32
3451 6844 3.118408 GCTTTGAAAAGGGGGAACAGTTT 60.118 43.478 5.02 0.00 36.53 2.66
3454 6847 1.000274 CGCTTTGAAAAGGGGGAACAG 60.000 52.381 11.02 0.00 43.03 3.16
3455 6848 1.036707 CGCTTTGAAAAGGGGGAACA 58.963 50.000 11.02 0.00 43.03 3.18
3462 6855 3.735746 AGAAAATTCGCGCTTTGAAAAGG 59.264 39.130 5.56 0.00 36.53 3.11
3463 6856 4.954238 AGAAAATTCGCGCTTTGAAAAG 57.046 36.364 5.56 0.00 39.03 2.27
3468 6861 7.280055 TCAAATTTAAGAAAATTCGCGCTTTG 58.720 30.769 5.56 4.24 43.04 2.77
3495 6888 8.113062 TCGTGCTTTTCAAATTGTTATTTTGTG 58.887 29.630 0.00 0.00 35.90 3.33
3506 6899 7.706179 TCAGAATTTCTTCGTGCTTTTCAAATT 59.294 29.630 0.00 0.00 36.45 1.82
3516 6909 4.143742 CGCTTTTTCAGAATTTCTTCGTGC 60.144 41.667 0.00 0.00 36.45 5.34
3624 7017 6.727215 AGCAAATTGTGAAAATGCGATTTTT 58.273 28.000 7.84 2.25 42.15 1.94
3664 7057 9.447157 TGAGACCAAAATTTTGAAACTGAAAAT 57.553 25.926 28.44 5.68 40.55 1.82
3665 7058 8.839310 TGAGACCAAAATTTTGAAACTGAAAA 57.161 26.923 28.44 5.71 40.55 2.29
3666 7059 8.839310 TTGAGACCAAAATTTTGAAACTGAAA 57.161 26.923 28.44 16.71 40.55 2.69
3667 7060 8.839310 TTTGAGACCAAAATTTTGAAACTGAA 57.161 26.923 28.44 19.95 39.15 3.02
3668 7061 8.839310 TTTTGAGACCAAAATTTTGAAACTGA 57.161 26.923 28.44 16.24 44.62 3.41
3685 7078 7.561556 CACAAGCATTTTCTGAATTTTGAGAC 58.438 34.615 0.00 0.00 0.00 3.36
3752 7145 8.334016 TGTTTGAACACATCGAATAAGTTTTG 57.666 30.769 0.00 0.00 33.95 2.44
3757 7150 7.006476 CGACAATGTTTGAACACATCGAATAAG 59.994 37.037 15.51 0.00 42.51 1.73
3758 7151 6.794636 CGACAATGTTTGAACACATCGAATAA 59.205 34.615 15.51 0.00 42.51 1.40
3759 7152 6.303370 CGACAATGTTTGAACACATCGAATA 58.697 36.000 15.51 0.00 42.51 1.75
3766 7161 4.909696 AATCCGACAATGTTTGAACACA 57.090 36.364 0.00 0.00 42.51 3.72
3778 7173 6.683715 GGAATAACCTTTGAAAATCCGACAA 58.316 36.000 0.00 0.00 35.41 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.