Multiple sequence alignment - TraesCS5D01G262400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G262400 chr5D 100.000 5399 0 0 1 5399 368329298 368334696 0.000000e+00 9971.0
1 TraesCS5D01G262400 chr5B 94.126 5056 194 49 1 5012 436255203 436260199 0.000000e+00 7596.0
2 TraesCS5D01G262400 chr5A 92.880 5000 213 67 1 4959 470192331 470197228 0.000000e+00 7129.0
3 TraesCS5D01G262400 chr5A 85.984 371 46 2 4989 5355 390228406 390228038 5.070000e-105 392.0
4 TraesCS5D01G262400 chr7A 79.964 2790 480 53 1078 3835 206910818 206913560 0.000000e+00 1982.0
5 TraesCS5D01G262400 chr7A 81.081 333 50 11 3941 4264 206913635 206913963 2.500000e-63 254.0
6 TraesCS5D01G262400 chr7D 79.670 2789 490 61 1078 3835 197610796 197613538 0.000000e+00 1938.0
7 TraesCS5D01G262400 chr7D 84.182 373 53 2 4987 5355 219707492 219707122 1.850000e-94 357.0
8 TraesCS5D01G262400 chr7D 80.480 333 52 11 3941 4264 197613806 197614134 5.400000e-60 243.0
9 TraesCS5D01G262400 chr7B 78.992 2799 504 58 1078 3841 161776639 161779388 0.000000e+00 1834.0
10 TraesCS5D01G262400 chr7B 79.769 346 55 13 3928 4264 161779449 161779788 2.510000e-58 237.0
11 TraesCS5D01G262400 chr6D 85.751 386 49 2 4974 5355 380574261 380574644 2.340000e-108 403.0
12 TraesCS5D01G262400 chr6D 78.042 378 71 11 4987 5355 97770897 97771271 1.510000e-55 228.0
13 TraesCS5D01G262400 chr4B 83.679 386 52 6 4974 5355 640457824 640457446 2.390000e-93 353.0
14 TraesCS5D01G262400 chr6B 78.571 378 65 13 4987 5353 51135704 51135332 9.040000e-58 235.0
15 TraesCS5D01G262400 chr3D 78.100 379 69 11 4987 5355 581084195 581083821 1.510000e-55 228.0
16 TraesCS5D01G262400 chr3D 83.478 115 13 6 3973 4083 609739077 609738965 9.570000e-18 102.0
17 TraesCS5D01G262400 chr3D 78.523 149 21 10 3937 4079 46583410 46583553 2.680000e-13 87.9
18 TraesCS5D01G262400 chr3B 78.215 381 65 15 4987 5355 46088186 46088560 1.510000e-55 228.0
19 TraesCS5D01G262400 chr3B 77.105 380 71 13 4987 5355 694178658 694178284 7.090000e-49 206.0
20 TraesCS5D01G262400 chr3A 83.478 115 13 6 3973 4083 743377872 743377760 9.570000e-18 102.0
21 TraesCS5D01G262400 chr3A 79.452 146 20 9 3939 4079 57944790 57944650 1.600000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G262400 chr5D 368329298 368334696 5398 False 9971.0 9971 100.0000 1 5399 1 chr5D.!!$F1 5398
1 TraesCS5D01G262400 chr5B 436255203 436260199 4996 False 7596.0 7596 94.1260 1 5012 1 chr5B.!!$F1 5011
2 TraesCS5D01G262400 chr5A 470192331 470197228 4897 False 7129.0 7129 92.8800 1 4959 1 chr5A.!!$F1 4958
3 TraesCS5D01G262400 chr7A 206910818 206913963 3145 False 1118.0 1982 80.5225 1078 4264 2 chr7A.!!$F1 3186
4 TraesCS5D01G262400 chr7D 197610796 197614134 3338 False 1090.5 1938 80.0750 1078 4264 2 chr7D.!!$F1 3186
5 TraesCS5D01G262400 chr7B 161776639 161779788 3149 False 1035.5 1834 79.3805 1078 4264 2 chr7B.!!$F1 3186

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
929 979 0.258484 TCCCCATCGCATCACCAAAT 59.742 50.0 0.00 0.00 0.0 2.32 F
950 1001 0.326927 AAACCATCCATCCGTCCGTT 59.673 50.0 0.00 0.00 0.0 4.44 F
2763 2823 0.874607 GTGACAACGCGTTCTCTGGT 60.875 55.0 23.92 16.78 0.0 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2745 2805 0.874175 CACCAGAGAACGCGTTGTCA 60.874 55.000 39.36 0.0 35.56 3.58 R
3106 3166 4.722700 GGCCAGCACGGACATGGT 62.723 66.667 0.00 0.0 45.64 3.55 R
4737 5029 0.106708 AGCGAGCAAGTCCAAACAGA 59.893 50.000 0.00 0.0 0.00 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 50 3.591527 TGGGAACATGAATGGGTACTTCT 59.408 43.478 0.00 0.00 33.40 2.85
72 75 7.930217 TGAGGTTCAGAACTAAAATTGTTGAG 58.070 34.615 13.13 0.00 0.00 3.02
134 146 5.852827 ACATTTGTACTGTTGGGAAAATGG 58.147 37.500 12.76 0.62 38.63 3.16
149 161 4.814771 GGAAAATGGGAGGTACAGTAATCG 59.185 45.833 0.00 0.00 0.00 3.34
207 219 4.630069 CAGCTGCAGTTAGTATTTTACCGT 59.370 41.667 16.64 0.00 0.00 4.83
220 232 7.212274 AGTATTTTACCGTCACTGTAAAGTGT 58.788 34.615 12.86 0.00 38.85 3.55
254 266 4.119862 TCTACAGAAGAACACTTGCACAC 58.880 43.478 0.00 0.00 0.00 3.82
370 383 3.425359 CGTCCTGCACATGCTAAAAAGAG 60.425 47.826 5.31 0.00 42.66 2.85
371 384 3.503748 GTCCTGCACATGCTAAAAAGAGT 59.496 43.478 5.31 0.00 42.66 3.24
397 420 2.282462 CCACTGTCAACCCCTGCC 60.282 66.667 0.00 0.00 0.00 4.85
577 601 1.353022 ACCTCGGGAGCCATTAACAAA 59.647 47.619 0.00 0.00 0.00 2.83
579 603 2.358898 CCTCGGGAGCCATTAACAAATG 59.641 50.000 0.00 0.00 0.00 2.32
580 604 3.016736 CTCGGGAGCCATTAACAAATGT 58.983 45.455 0.00 0.00 0.00 2.71
582 606 2.159254 CGGGAGCCATTAACAAATGTGG 60.159 50.000 0.00 0.00 34.84 4.17
725 769 1.717791 CTGCACACCACACCACACTG 61.718 60.000 0.00 0.00 0.00 3.66
726 770 3.110139 CACACCACACCACACTGC 58.890 61.111 0.00 0.00 0.00 4.40
727 771 1.748500 CACACCACACCACACTGCA 60.749 57.895 0.00 0.00 0.00 4.41
728 772 1.748879 ACACCACACCACACTGCAC 60.749 57.895 0.00 0.00 0.00 4.57
729 773 1.451927 CACCACACCACACTGCACT 60.452 57.895 0.00 0.00 0.00 4.40
753 797 4.559300 GCACTGCAGAAGCCAAAATCTTTA 60.559 41.667 23.35 0.00 41.13 1.85
756 800 5.713861 ACTGCAGAAGCCAAAATCTTTAGAT 59.286 36.000 23.35 0.00 41.13 1.98
921 971 2.203394 GCCACATCCCCATCGCAT 60.203 61.111 0.00 0.00 0.00 4.73
929 979 0.258484 TCCCCATCGCATCACCAAAT 59.742 50.000 0.00 0.00 0.00 2.32
940 991 3.055963 GCATCACCAAATCAAACCATCCA 60.056 43.478 0.00 0.00 0.00 3.41
950 1001 0.326927 AAACCATCCATCCGTCCGTT 59.673 50.000 0.00 0.00 0.00 4.44
961 1012 2.126580 GTCCGTTCGTCCACCTCG 60.127 66.667 0.00 0.00 0.00 4.63
1536 1596 2.643044 GCTCTACGACAACGAGCTG 58.357 57.895 0.00 0.00 42.66 4.24
2247 2307 2.878429 CAGTCGGTGGACCTCTCG 59.122 66.667 0.00 0.00 44.54 4.04
2653 2713 3.390521 TTGCCTCGATGCCGGAGT 61.391 61.111 5.05 0.00 36.24 3.85
2745 2805 3.699894 CAGCTGCTGGACCTCGGT 61.700 66.667 21.71 0.00 0.00 4.69
2763 2823 0.874607 GTGACAACGCGTTCTCTGGT 60.875 55.000 23.92 16.78 0.00 4.00
3069 3129 4.508128 GGCGATGGCTCCGACGAA 62.508 66.667 0.00 0.00 39.81 3.85
3072 3132 1.360551 CGATGGCTCCGACGAATCT 59.639 57.895 0.00 0.00 0.00 2.40
3081 3141 2.585247 GACGAATCTTCCCGGCGG 60.585 66.667 21.46 21.46 0.00 6.13
3106 3166 1.134367 CCCTCACGACGCTCAAGATAA 59.866 52.381 0.00 0.00 0.00 1.75
3117 3177 2.609459 GCTCAAGATAACCATGTCCGTG 59.391 50.000 0.00 0.00 0.00 4.94
3866 4071 1.067846 TCGCACTTGCAAGATCGTACT 60.068 47.619 32.50 5.49 42.21 2.73
3867 4072 1.059692 CGCACTTGCAAGATCGTACTG 59.940 52.381 32.50 18.48 42.21 2.74
3868 4073 1.201965 GCACTTGCAAGATCGTACTGC 60.202 52.381 32.50 23.78 41.59 4.40
3871 4076 2.283298 CTTGCAAGATCGTACTGCCAT 58.717 47.619 22.31 0.00 0.00 4.40
3872 4077 2.401583 TGCAAGATCGTACTGCCATT 57.598 45.000 8.87 0.00 0.00 3.16
3873 4078 3.535280 TGCAAGATCGTACTGCCATTA 57.465 42.857 8.87 0.00 0.00 1.90
3874 4079 3.194861 TGCAAGATCGTACTGCCATTAC 58.805 45.455 8.87 0.00 0.00 1.89
3875 4080 3.118775 TGCAAGATCGTACTGCCATTACT 60.119 43.478 8.87 0.00 0.00 2.24
3876 4081 3.246226 GCAAGATCGTACTGCCATTACTG 59.754 47.826 0.00 0.00 0.00 2.74
3877 4082 3.735237 AGATCGTACTGCCATTACTGG 57.265 47.619 0.00 0.00 46.17 4.00
3880 4085 2.453521 TCGTACTGCCATTACTGGAGT 58.546 47.619 2.72 6.41 46.37 3.85
3901 4106 6.039382 GGAGTACAGTTTGAACCTGATTGTTT 59.961 38.462 0.00 0.00 0.00 2.83
3902 4107 6.795399 AGTACAGTTTGAACCTGATTGTTTG 58.205 36.000 0.00 0.00 0.00 2.93
3903 4108 5.913137 ACAGTTTGAACCTGATTGTTTGA 57.087 34.783 0.00 0.00 0.00 2.69
3904 4109 6.469782 ACAGTTTGAACCTGATTGTTTGAT 57.530 33.333 0.00 0.00 0.00 2.57
3905 4110 6.877236 ACAGTTTGAACCTGATTGTTTGATT 58.123 32.000 0.00 0.00 0.00 2.57
3906 4111 6.757947 ACAGTTTGAACCTGATTGTTTGATTG 59.242 34.615 0.00 0.00 0.00 2.67
3907 4112 6.757947 CAGTTTGAACCTGATTGTTTGATTGT 59.242 34.615 0.00 0.00 0.00 2.71
3908 4113 7.278424 CAGTTTGAACCTGATTGTTTGATTGTT 59.722 33.333 0.00 0.00 0.00 2.83
4547 4831 4.096681 AGTGGAGGATGTGTGTAGATCAA 58.903 43.478 0.00 0.00 0.00 2.57
4550 4835 3.462021 GAGGATGTGTGTAGATCAAGCC 58.538 50.000 0.00 0.00 0.00 4.35
4554 4839 1.977854 TGTGTGTAGATCAAGCCTGGT 59.022 47.619 0.00 0.00 0.00 4.00
4573 4862 7.657761 AGCCTGGTAAGTAATTAATCAATCGAG 59.342 37.037 0.00 0.00 0.00 4.04
4575 4864 8.148351 CCTGGTAAGTAATTAATCAATCGAGGA 58.852 37.037 0.00 0.00 0.00 3.71
4592 4881 6.630444 TCGAGGATGTACTTAGGTGTAATC 57.370 41.667 0.00 0.00 0.00 1.75
4620 4909 3.052414 TCTCTGGCCTTGTACATACCCTA 60.052 47.826 3.32 0.00 0.00 3.53
4623 4912 1.069668 GGCCTTGTACATACCCTACGG 59.930 57.143 0.00 0.00 0.00 4.02
4737 5029 4.990910 ACCTGCTGGTCCTGGGCT 62.991 66.667 9.88 0.00 44.78 5.19
4738 5038 4.106925 CCTGCTGGTCCTGGGCTC 62.107 72.222 0.00 0.00 0.00 4.70
4757 5057 0.947244 CTGTTTGGACTTGCTCGCTT 59.053 50.000 0.00 0.00 0.00 4.68
4758 5058 1.334869 CTGTTTGGACTTGCTCGCTTT 59.665 47.619 0.00 0.00 0.00 3.51
4759 5059 1.065401 TGTTTGGACTTGCTCGCTTTG 59.935 47.619 0.00 0.00 0.00 2.77
4760 5060 0.030638 TTTGGACTTGCTCGCTTTGC 59.969 50.000 0.00 0.00 0.00 3.68
4761 5061 0.819259 TTGGACTTGCTCGCTTTGCT 60.819 50.000 0.00 0.00 0.00 3.91
4762 5062 0.819259 TGGACTTGCTCGCTTTGCTT 60.819 50.000 0.00 0.00 0.00 3.91
4763 5063 0.386478 GGACTTGCTCGCTTTGCTTG 60.386 55.000 0.00 0.00 0.00 4.01
4764 5064 1.000736 GACTTGCTCGCTTTGCTTGC 61.001 55.000 0.00 0.00 0.00 4.01
4765 5065 1.285023 CTTGCTCGCTTTGCTTGCT 59.715 52.632 0.00 0.00 0.00 3.91
4766 5066 1.002250 CTTGCTCGCTTTGCTTGCTG 61.002 55.000 0.00 0.00 0.00 4.41
4767 5067 2.804090 GCTCGCTTTGCTTGCTGC 60.804 61.111 0.00 0.00 43.25 5.25
4780 5080 0.249955 TTGCTGCATCGAGATGGACA 59.750 50.000 14.13 9.56 39.16 4.02
4830 5130 3.378339 GGACGGACGATCGTTTAATGAT 58.622 45.455 23.63 0.00 43.96 2.45
4941 5245 1.430632 GCTTCGTGTCGACGGGATA 59.569 57.895 11.62 1.67 46.11 2.59
4979 5283 4.994907 TTTAGTGCGCCTTATAGACAGA 57.005 40.909 4.18 0.00 0.00 3.41
4980 5284 4.569761 TTAGTGCGCCTTATAGACAGAG 57.430 45.455 4.18 0.00 0.00 3.35
4981 5285 2.379972 AGTGCGCCTTATAGACAGAGT 58.620 47.619 4.18 0.00 0.00 3.24
5001 5309 8.088981 ACAGAGTGTCGATTACAAGAAAACTAT 58.911 33.333 5.71 0.00 40.63 2.12
5012 5320 2.263077 AGAAAACTATCACTCGCTGCG 58.737 47.619 17.25 17.25 0.00 5.18
5013 5321 2.094700 AGAAAACTATCACTCGCTGCGA 60.095 45.455 24.43 24.43 0.00 5.10
5014 5322 2.363788 AAACTATCACTCGCTGCGAA 57.636 45.000 25.86 11.91 34.74 4.70
5015 5323 1.630148 AACTATCACTCGCTGCGAAC 58.370 50.000 25.86 0.00 34.74 3.95
5016 5324 0.526211 ACTATCACTCGCTGCGAACA 59.474 50.000 25.86 12.51 34.74 3.18
5017 5325 0.917259 CTATCACTCGCTGCGAACAC 59.083 55.000 25.86 0.00 34.74 3.32
5018 5326 0.457853 TATCACTCGCTGCGAACACC 60.458 55.000 25.86 0.00 34.74 4.16
5019 5327 2.434658 ATCACTCGCTGCGAACACCA 62.435 55.000 25.86 8.57 34.74 4.17
5020 5328 2.108157 ACTCGCTGCGAACACCAA 59.892 55.556 25.86 1.37 34.74 3.67
5021 5329 1.956170 ACTCGCTGCGAACACCAAG 60.956 57.895 25.86 14.29 34.74 3.61
5022 5330 1.956170 CTCGCTGCGAACACCAAGT 60.956 57.895 25.86 0.00 34.74 3.16
5023 5331 2.162921 CTCGCTGCGAACACCAAGTG 62.163 60.000 25.86 6.97 39.75 3.16
5025 5333 1.218875 CGCTGCGAACACCAAGTGTA 61.219 55.000 18.66 0.00 46.79 2.90
5026 5334 1.156736 GCTGCGAACACCAAGTGTAT 58.843 50.000 0.00 0.00 46.79 2.29
5027 5335 1.128692 GCTGCGAACACCAAGTGTATC 59.871 52.381 0.00 1.32 46.79 2.24
5028 5336 2.412870 CTGCGAACACCAAGTGTATCA 58.587 47.619 0.00 0.00 46.79 2.15
5029 5337 2.139917 TGCGAACACCAAGTGTATCAC 58.860 47.619 0.00 0.00 46.79 3.06
5030 5338 2.139917 GCGAACACCAAGTGTATCACA 58.860 47.619 0.00 0.00 46.79 3.58
5031 5339 2.096417 GCGAACACCAAGTGTATCACAC 60.096 50.000 0.00 1.13 46.79 3.82
5042 5350 3.052455 TGTATCACACACACCACATCC 57.948 47.619 0.00 0.00 30.04 3.51
5043 5351 1.999735 GTATCACACACACCACATCCG 59.000 52.381 0.00 0.00 0.00 4.18
5044 5352 0.321564 ATCACACACACCACATCCGG 60.322 55.000 0.00 0.00 0.00 5.14
5045 5353 1.965930 CACACACACCACATCCGGG 60.966 63.158 0.00 0.00 0.00 5.73
5046 5354 2.144078 ACACACACCACATCCGGGA 61.144 57.895 0.00 0.00 0.00 5.14
5047 5355 1.072332 CACACACCACATCCGGGAA 59.928 57.895 0.00 0.00 0.00 3.97
5048 5356 0.536233 CACACACCACATCCGGGAAA 60.536 55.000 0.00 0.00 0.00 3.13
5049 5357 0.250727 ACACACCACATCCGGGAAAG 60.251 55.000 0.00 0.00 0.00 2.62
5050 5358 0.036164 CACACCACATCCGGGAAAGA 59.964 55.000 0.00 0.00 0.00 2.52
5051 5359 0.036306 ACACCACATCCGGGAAAGAC 59.964 55.000 0.00 0.00 0.00 3.01
5052 5360 0.676782 CACCACATCCGGGAAAGACC 60.677 60.000 0.00 0.00 38.08 3.85
5053 5361 1.131303 ACCACATCCGGGAAAGACCA 61.131 55.000 0.00 0.00 41.20 4.02
5054 5362 0.037590 CCACATCCGGGAAAGACCAA 59.962 55.000 0.00 0.00 41.20 3.67
5055 5363 1.546773 CCACATCCGGGAAAGACCAAA 60.547 52.381 0.00 0.00 41.20 3.28
5056 5364 1.812571 CACATCCGGGAAAGACCAAAG 59.187 52.381 0.00 0.00 41.20 2.77
5057 5365 1.702957 ACATCCGGGAAAGACCAAAGA 59.297 47.619 0.00 0.00 41.20 2.52
5058 5366 2.084546 CATCCGGGAAAGACCAAAGAC 58.915 52.381 0.00 0.00 41.20 3.01
5059 5367 1.430992 TCCGGGAAAGACCAAAGACT 58.569 50.000 0.00 0.00 41.20 3.24
5060 5368 1.071699 TCCGGGAAAGACCAAAGACTG 59.928 52.381 0.00 0.00 41.20 3.51
5068 5376 3.763671 CCAAAGACTGGCACCACC 58.236 61.111 0.00 0.00 38.76 4.61
5069 5377 2.260869 CCAAAGACTGGCACCACCG 61.261 63.158 0.00 0.00 43.94 4.94
5070 5378 2.594592 AAAGACTGGCACCACCGC 60.595 61.111 0.00 0.00 43.94 5.68
5071 5379 3.414136 AAAGACTGGCACCACCGCA 62.414 57.895 0.00 0.00 43.94 5.69
5072 5380 2.902423 AAAGACTGGCACCACCGCAA 62.902 55.000 0.00 0.00 43.94 4.85
5073 5381 2.902423 AAGACTGGCACCACCGCAAA 62.902 55.000 0.00 0.00 43.94 3.68
5074 5382 2.906897 ACTGGCACCACCGCAAAG 60.907 61.111 0.00 0.00 43.94 2.77
5075 5383 4.347453 CTGGCACCACCGCAAAGC 62.347 66.667 0.00 0.00 43.94 3.51
5077 5385 3.910490 GGCACCACCGCAAAGCAA 61.910 61.111 0.00 0.00 0.00 3.91
5078 5386 2.105930 GCACCACCGCAAAGCAAA 59.894 55.556 0.00 0.00 0.00 3.68
5079 5387 2.237066 GCACCACCGCAAAGCAAAC 61.237 57.895 0.00 0.00 0.00 2.93
5080 5388 1.437160 CACCACCGCAAAGCAAACT 59.563 52.632 0.00 0.00 0.00 2.66
5081 5389 0.665835 CACCACCGCAAAGCAAACTA 59.334 50.000 0.00 0.00 0.00 2.24
5082 5390 1.269448 CACCACCGCAAAGCAAACTAT 59.731 47.619 0.00 0.00 0.00 2.12
5083 5391 2.486203 CACCACCGCAAAGCAAACTATA 59.514 45.455 0.00 0.00 0.00 1.31
5084 5392 3.057876 CACCACCGCAAAGCAAACTATAA 60.058 43.478 0.00 0.00 0.00 0.98
5085 5393 3.057806 ACCACCGCAAAGCAAACTATAAC 60.058 43.478 0.00 0.00 0.00 1.89
5086 5394 3.057876 CCACCGCAAAGCAAACTATAACA 60.058 43.478 0.00 0.00 0.00 2.41
5087 5395 3.911964 CACCGCAAAGCAAACTATAACAC 59.088 43.478 0.00 0.00 0.00 3.32
5088 5396 3.566322 ACCGCAAAGCAAACTATAACACA 59.434 39.130 0.00 0.00 0.00 3.72
5089 5397 4.036971 ACCGCAAAGCAAACTATAACACAA 59.963 37.500 0.00 0.00 0.00 3.33
5090 5398 4.979197 CCGCAAAGCAAACTATAACACAAA 59.021 37.500 0.00 0.00 0.00 2.83
5091 5399 5.460419 CCGCAAAGCAAACTATAACACAAAA 59.540 36.000 0.00 0.00 0.00 2.44
5092 5400 6.345723 CCGCAAAGCAAACTATAACACAAAAG 60.346 38.462 0.00 0.00 0.00 2.27
5093 5401 6.345723 CGCAAAGCAAACTATAACACAAAAGG 60.346 38.462 0.00 0.00 0.00 3.11
5094 5402 6.073819 GCAAAGCAAACTATAACACAAAAGGG 60.074 38.462 0.00 0.00 0.00 3.95
5095 5403 5.134202 AGCAAACTATAACACAAAAGGGC 57.866 39.130 0.00 0.00 0.00 5.19
5096 5404 4.021456 AGCAAACTATAACACAAAAGGGCC 60.021 41.667 0.00 0.00 0.00 5.80
5097 5405 4.021456 GCAAACTATAACACAAAAGGGCCT 60.021 41.667 0.00 0.00 0.00 5.19
5098 5406 5.469479 CAAACTATAACACAAAAGGGCCTG 58.531 41.667 6.92 0.00 0.00 4.85
5099 5407 4.382386 ACTATAACACAAAAGGGCCTGT 57.618 40.909 6.92 0.00 0.00 4.00
5100 5408 4.332828 ACTATAACACAAAAGGGCCTGTC 58.667 43.478 6.92 0.00 0.00 3.51
5101 5409 1.989706 TAACACAAAAGGGCCTGTCC 58.010 50.000 6.92 0.00 0.00 4.02
5102 5410 0.261696 AACACAAAAGGGCCTGTCCT 59.738 50.000 6.92 0.00 39.17 3.85
5103 5411 1.145571 ACACAAAAGGGCCTGTCCTA 58.854 50.000 6.92 0.00 35.80 2.94
5104 5412 1.497286 ACACAAAAGGGCCTGTCCTAA 59.503 47.619 6.92 0.00 35.80 2.69
5105 5413 2.110011 ACACAAAAGGGCCTGTCCTAAT 59.890 45.455 6.92 0.00 35.80 1.73
5106 5414 2.755103 CACAAAAGGGCCTGTCCTAATC 59.245 50.000 6.92 0.00 35.80 1.75
5107 5415 2.649816 ACAAAAGGGCCTGTCCTAATCT 59.350 45.455 6.92 0.00 35.80 2.40
5108 5416 3.850173 ACAAAAGGGCCTGTCCTAATCTA 59.150 43.478 6.92 0.00 35.80 1.98
5109 5417 4.291249 ACAAAAGGGCCTGTCCTAATCTAA 59.709 41.667 6.92 0.00 35.80 2.10
5110 5418 5.044105 ACAAAAGGGCCTGTCCTAATCTAAT 60.044 40.000 6.92 0.00 35.80 1.73
5111 5419 6.159751 ACAAAAGGGCCTGTCCTAATCTAATA 59.840 38.462 6.92 0.00 35.80 0.98
5112 5420 5.827326 AAGGGCCTGTCCTAATCTAATAC 57.173 43.478 6.92 0.00 35.80 1.89
5113 5421 4.827789 AGGGCCTGTCCTAATCTAATACA 58.172 43.478 4.50 0.00 34.92 2.29
5114 5422 4.593634 AGGGCCTGTCCTAATCTAATACAC 59.406 45.833 4.50 0.00 34.92 2.90
5115 5423 4.557205 GGCCTGTCCTAATCTAATACACG 58.443 47.826 0.00 0.00 0.00 4.49
5116 5424 4.280174 GGCCTGTCCTAATCTAATACACGA 59.720 45.833 0.00 0.00 0.00 4.35
5117 5425 5.221130 GCCTGTCCTAATCTAATACACGAC 58.779 45.833 0.00 0.00 0.00 4.34
5118 5426 5.221185 GCCTGTCCTAATCTAATACACGACA 60.221 44.000 0.00 0.00 0.00 4.35
5119 5427 6.207213 CCTGTCCTAATCTAATACACGACAC 58.793 44.000 0.00 0.00 0.00 3.67
5120 5428 6.140303 TGTCCTAATCTAATACACGACACC 57.860 41.667 0.00 0.00 0.00 4.16
5121 5429 5.210715 GTCCTAATCTAATACACGACACCG 58.789 45.833 0.00 0.00 42.50 4.94
5122 5430 3.979495 CCTAATCTAATACACGACACCGC 59.021 47.826 0.00 0.00 39.95 5.68
5123 5431 2.115348 ATCTAATACACGACACCGCG 57.885 50.000 0.00 0.00 39.95 6.46
5124 5432 0.804364 TCTAATACACGACACCGCGT 59.196 50.000 4.92 0.00 46.88 6.01
5125 5433 1.186030 CTAATACACGACACCGCGTC 58.814 55.000 4.92 0.00 43.59 5.19
5126 5434 0.520847 TAATACACGACACCGCGTCA 59.479 50.000 4.92 0.00 45.70 4.35
5127 5435 1.005294 AATACACGACACCGCGTCAC 61.005 55.000 4.92 0.00 45.70 3.67
5128 5436 1.859427 ATACACGACACCGCGTCACT 61.859 55.000 4.92 0.00 45.70 3.41
5129 5437 2.720561 TACACGACACCGCGTCACTG 62.721 60.000 4.92 0.00 45.70 3.66
5148 5456 4.351938 CGACGCCGGTCACCTTCA 62.352 66.667 1.90 0.00 43.61 3.02
5149 5457 2.029964 GACGCCGGTCACCTTCAA 59.970 61.111 1.90 0.00 42.91 2.69
5150 5458 1.595929 GACGCCGGTCACCTTCAAA 60.596 57.895 1.90 0.00 42.91 2.69
5151 5459 1.566018 GACGCCGGTCACCTTCAAAG 61.566 60.000 1.90 0.00 42.91 2.77
5152 5460 1.301401 CGCCGGTCACCTTCAAAGA 60.301 57.895 1.90 0.00 0.00 2.52
5153 5461 1.566018 CGCCGGTCACCTTCAAAGAC 61.566 60.000 1.90 0.00 0.00 3.01
5154 5462 1.235281 GCCGGTCACCTTCAAAGACC 61.235 60.000 1.90 0.00 46.48 3.85
5160 5468 4.338379 GTCACCTTCAAAGACCACTACT 57.662 45.455 0.00 0.00 0.00 2.57
5161 5469 4.704965 GTCACCTTCAAAGACCACTACTT 58.295 43.478 0.00 0.00 0.00 2.24
5162 5470 4.750598 GTCACCTTCAAAGACCACTACTTC 59.249 45.833 0.00 0.00 0.00 3.01
5163 5471 4.654262 TCACCTTCAAAGACCACTACTTCT 59.346 41.667 0.00 0.00 0.00 2.85
5164 5472 4.752101 CACCTTCAAAGACCACTACTTCTG 59.248 45.833 0.00 0.00 0.00 3.02
5165 5473 3.748568 CCTTCAAAGACCACTACTTCTGC 59.251 47.826 0.00 0.00 0.00 4.26
5166 5474 4.380531 CTTCAAAGACCACTACTTCTGCA 58.619 43.478 0.00 0.00 0.00 4.41
5167 5475 3.995199 TCAAAGACCACTACTTCTGCAG 58.005 45.455 7.63 7.63 0.00 4.41
5168 5476 3.641436 TCAAAGACCACTACTTCTGCAGA 59.359 43.478 13.74 13.74 0.00 4.26
5169 5477 3.951775 AAGACCACTACTTCTGCAGAG 57.048 47.619 17.43 13.36 0.00 3.35
5170 5478 1.548269 AGACCACTACTTCTGCAGAGC 59.452 52.381 17.43 0.55 0.00 4.09
5171 5479 1.548269 GACCACTACTTCTGCAGAGCT 59.452 52.381 17.43 8.42 0.00 4.09
5172 5480 1.974236 ACCACTACTTCTGCAGAGCTT 59.026 47.619 17.43 7.72 0.00 3.74
5173 5481 2.028567 ACCACTACTTCTGCAGAGCTTC 60.029 50.000 17.43 0.00 0.00 3.86
5174 5482 2.233431 CCACTACTTCTGCAGAGCTTCT 59.767 50.000 17.43 1.52 0.00 2.85
5175 5483 3.510719 CACTACTTCTGCAGAGCTTCTC 58.489 50.000 17.43 0.00 0.00 2.87
5176 5484 3.193267 CACTACTTCTGCAGAGCTTCTCT 59.807 47.826 17.43 0.00 42.11 3.10
5177 5485 3.831911 ACTACTTCTGCAGAGCTTCTCTT 59.168 43.478 17.43 0.00 38.99 2.85
5178 5486 5.013547 ACTACTTCTGCAGAGCTTCTCTTA 58.986 41.667 17.43 0.00 38.99 2.10
5179 5487 5.656416 ACTACTTCTGCAGAGCTTCTCTTAT 59.344 40.000 17.43 0.00 38.99 1.73
5180 5488 5.009854 ACTTCTGCAGAGCTTCTCTTATC 57.990 43.478 17.43 0.00 38.99 1.75
5181 5489 3.706802 TCTGCAGAGCTTCTCTTATCG 57.293 47.619 13.74 0.00 38.99 2.92
5182 5490 3.282885 TCTGCAGAGCTTCTCTTATCGA 58.717 45.455 13.74 0.00 38.99 3.59
5183 5491 3.066064 TCTGCAGAGCTTCTCTTATCGAC 59.934 47.826 13.74 0.00 38.99 4.20
5184 5492 2.223363 TGCAGAGCTTCTCTTATCGACG 60.223 50.000 0.00 0.00 38.99 5.12
5185 5493 2.380660 CAGAGCTTCTCTTATCGACGC 58.619 52.381 0.00 0.00 38.99 5.19
5186 5494 2.017782 AGAGCTTCTCTTATCGACGCA 58.982 47.619 0.00 0.00 37.60 5.24
5187 5495 2.621055 AGAGCTTCTCTTATCGACGCAT 59.379 45.455 0.00 0.00 37.60 4.73
5188 5496 2.977169 GAGCTTCTCTTATCGACGCATC 59.023 50.000 0.00 0.00 0.00 3.91
5189 5497 2.359214 AGCTTCTCTTATCGACGCATCA 59.641 45.455 0.00 0.00 0.00 3.07
5190 5498 3.005261 AGCTTCTCTTATCGACGCATCAT 59.995 43.478 0.00 0.00 0.00 2.45
5191 5499 3.363426 GCTTCTCTTATCGACGCATCATC 59.637 47.826 0.00 0.00 0.00 2.92
5192 5500 3.560902 TCTCTTATCGACGCATCATCC 57.439 47.619 0.00 0.00 0.00 3.51
5193 5501 2.884639 TCTCTTATCGACGCATCATCCA 59.115 45.455 0.00 0.00 0.00 3.41
5194 5502 2.983136 CTCTTATCGACGCATCATCCAC 59.017 50.000 0.00 0.00 0.00 4.02
5195 5503 2.623416 TCTTATCGACGCATCATCCACT 59.377 45.455 0.00 0.00 0.00 4.00
5196 5504 2.706555 TATCGACGCATCATCCACTC 57.293 50.000 0.00 0.00 0.00 3.51
5197 5505 1.035923 ATCGACGCATCATCCACTCT 58.964 50.000 0.00 0.00 0.00 3.24
5198 5506 0.101219 TCGACGCATCATCCACTCTG 59.899 55.000 0.00 0.00 0.00 3.35
5199 5507 0.101219 CGACGCATCATCCACTCTGA 59.899 55.000 0.00 0.00 0.00 3.27
5200 5508 1.850377 GACGCATCATCCACTCTGAG 58.150 55.000 2.45 2.45 0.00 3.35
5201 5509 0.179089 ACGCATCATCCACTCTGAGC 60.179 55.000 4.19 0.00 0.00 4.26
5202 5510 1.213733 CGCATCATCCACTCTGAGCG 61.214 60.000 4.19 0.00 35.56 5.03
5203 5511 1.497223 GCATCATCCACTCTGAGCGC 61.497 60.000 0.00 0.00 0.00 5.92
5204 5512 0.879400 CATCATCCACTCTGAGCGCC 60.879 60.000 2.29 0.00 0.00 6.53
5205 5513 1.047596 ATCATCCACTCTGAGCGCCT 61.048 55.000 2.29 0.00 0.00 5.52
5206 5514 0.395724 TCATCCACTCTGAGCGCCTA 60.396 55.000 2.29 0.00 0.00 3.93
5207 5515 0.461548 CATCCACTCTGAGCGCCTAA 59.538 55.000 2.29 0.00 0.00 2.69
5208 5516 0.749649 ATCCACTCTGAGCGCCTAAG 59.250 55.000 2.29 0.00 0.00 2.18
5209 5517 0.323451 TCCACTCTGAGCGCCTAAGA 60.323 55.000 2.29 3.68 0.00 2.10
5210 5518 0.102120 CCACTCTGAGCGCCTAAGAG 59.898 60.000 22.93 22.93 43.10 2.85
5211 5519 0.102120 CACTCTGAGCGCCTAAGAGG 59.898 60.000 26.16 15.95 42.05 3.69
5212 5520 0.033991 ACTCTGAGCGCCTAAGAGGA 60.034 55.000 26.16 8.10 42.05 3.71
5213 5521 1.107114 CTCTGAGCGCCTAAGAGGAA 58.893 55.000 18.94 0.00 35.86 3.36
5214 5522 1.066908 CTCTGAGCGCCTAAGAGGAAG 59.933 57.143 18.94 0.54 35.86 3.46
5215 5523 0.820871 CTGAGCGCCTAAGAGGAAGT 59.179 55.000 2.29 0.00 37.67 3.01
5216 5524 0.532573 TGAGCGCCTAAGAGGAAGTG 59.467 55.000 2.29 0.00 37.67 3.16
5217 5525 0.818296 GAGCGCCTAAGAGGAAGTGA 59.182 55.000 2.29 0.00 37.67 3.41
5218 5526 0.533032 AGCGCCTAAGAGGAAGTGAC 59.467 55.000 2.29 0.00 37.67 3.67
5219 5527 0.246635 GCGCCTAAGAGGAAGTGACA 59.753 55.000 0.00 0.00 37.67 3.58
5220 5528 1.337823 GCGCCTAAGAGGAAGTGACAA 60.338 52.381 0.00 0.00 37.67 3.18
5221 5529 2.611518 CGCCTAAGAGGAAGTGACAAG 58.388 52.381 0.00 0.00 37.67 3.16
5222 5530 2.028930 CGCCTAAGAGGAAGTGACAAGT 60.029 50.000 0.00 0.00 37.67 3.16
5223 5531 3.330267 GCCTAAGAGGAAGTGACAAGTG 58.670 50.000 0.00 0.00 37.67 3.16
5224 5532 3.866449 GCCTAAGAGGAAGTGACAAGTGG 60.866 52.174 0.00 0.00 37.67 4.00
5225 5533 3.578716 CCTAAGAGGAAGTGACAAGTGGA 59.421 47.826 0.00 0.00 37.67 4.02
5226 5534 4.223923 CCTAAGAGGAAGTGACAAGTGGAT 59.776 45.833 0.00 0.00 37.67 3.41
5227 5535 3.692257 AGAGGAAGTGACAAGTGGATG 57.308 47.619 0.00 0.00 0.00 3.51
5228 5536 2.975489 AGAGGAAGTGACAAGTGGATGT 59.025 45.455 0.00 0.00 35.90 3.06
5229 5537 9.874950 CCTAAGAGGAAGTGACAAGTGGATGTC 62.875 48.148 0.62 0.62 43.12 3.06
5237 5545 1.273606 ACAAGTGGATGTCAGGACTCG 59.726 52.381 0.65 0.00 0.00 4.18
5238 5546 1.546029 CAAGTGGATGTCAGGACTCGA 59.454 52.381 0.65 0.00 0.00 4.04
5239 5547 2.151502 AGTGGATGTCAGGACTCGAT 57.848 50.000 0.65 0.00 0.00 3.59
5240 5548 2.028130 AGTGGATGTCAGGACTCGATC 58.972 52.381 0.65 0.00 0.00 3.69
5252 5560 3.438297 GACTCGATCCAATCCGAAGAA 57.562 47.619 0.00 0.00 34.17 2.52
5253 5561 3.376540 GACTCGATCCAATCCGAAGAAG 58.623 50.000 0.00 0.00 34.17 2.85
5254 5562 3.024547 ACTCGATCCAATCCGAAGAAGA 58.975 45.455 0.00 0.00 34.17 2.87
5255 5563 3.181485 ACTCGATCCAATCCGAAGAAGAC 60.181 47.826 0.00 0.00 34.17 3.01
5256 5564 2.758423 TCGATCCAATCCGAAGAAGACA 59.242 45.455 0.00 0.00 0.00 3.41
5257 5565 2.860735 CGATCCAATCCGAAGAAGACAC 59.139 50.000 0.00 0.00 0.00 3.67
5258 5566 2.762535 TCCAATCCGAAGAAGACACC 57.237 50.000 0.00 0.00 0.00 4.16
5259 5567 1.067142 TCCAATCCGAAGAAGACACCG 60.067 52.381 0.00 0.00 0.00 4.94
5260 5568 1.337823 CCAATCCGAAGAAGACACCGT 60.338 52.381 0.00 0.00 0.00 4.83
5261 5569 1.993370 CAATCCGAAGAAGACACCGTC 59.007 52.381 0.00 0.00 0.00 4.79
5262 5570 1.546961 ATCCGAAGAAGACACCGTCT 58.453 50.000 0.00 0.00 45.64 4.18
5270 5578 3.914984 AGACACCGTCTTGGACATG 57.085 52.632 0.00 0.00 40.28 3.21
5271 5579 0.320771 AGACACCGTCTTGGACATGC 60.321 55.000 0.00 0.00 40.28 4.06
5272 5580 1.626654 GACACCGTCTTGGACATGCG 61.627 60.000 0.00 0.00 42.00 4.73
5273 5581 1.374125 CACCGTCTTGGACATGCGA 60.374 57.895 0.00 0.00 42.00 5.10
5274 5582 1.374252 ACCGTCTTGGACATGCGAC 60.374 57.895 0.00 0.00 42.00 5.19
5275 5583 2.444624 CCGTCTTGGACATGCGACG 61.445 63.158 12.26 12.26 46.21 5.12
5276 5584 2.444624 CGTCTTGGACATGCGACGG 61.445 63.158 11.69 0.00 43.80 4.79
5277 5585 2.100631 GTCTTGGACATGCGACGGG 61.101 63.158 0.00 0.00 32.09 5.28
5278 5586 3.499737 CTTGGACATGCGACGGGC 61.500 66.667 0.00 0.00 43.96 6.13
5288 5596 4.805231 CGACGGGCGTACATGGCA 62.805 66.667 0.00 0.00 35.84 4.92
5289 5597 3.192922 GACGGGCGTACATGGCAC 61.193 66.667 0.00 0.00 35.84 5.01
5290 5598 4.770874 ACGGGCGTACATGGCACC 62.771 66.667 0.00 0.00 35.84 5.01
5302 5610 4.467084 GGCACCGCCGAGGATCAA 62.467 66.667 3.89 0.00 45.00 2.57
5303 5611 2.892425 GCACCGCCGAGGATCAAG 60.892 66.667 3.89 0.00 45.00 3.02
5304 5612 2.892640 CACCGCCGAGGATCAAGA 59.107 61.111 3.89 0.00 45.00 3.02
5305 5613 1.218047 CACCGCCGAGGATCAAGAA 59.782 57.895 3.89 0.00 45.00 2.52
5306 5614 0.391130 CACCGCCGAGGATCAAGAAA 60.391 55.000 3.89 0.00 45.00 2.52
5307 5615 0.108138 ACCGCCGAGGATCAAGAAAG 60.108 55.000 3.89 0.00 45.00 2.62
5308 5616 0.811616 CCGCCGAGGATCAAGAAAGG 60.812 60.000 0.00 0.00 45.00 3.11
5309 5617 0.175760 CGCCGAGGATCAAGAAAGGA 59.824 55.000 0.00 0.00 33.17 3.36
5310 5618 1.657822 GCCGAGGATCAAGAAAGGAC 58.342 55.000 0.00 0.00 33.17 3.85
5311 5619 1.066143 GCCGAGGATCAAGAAAGGACA 60.066 52.381 0.00 0.00 33.17 4.02
5312 5620 2.615493 GCCGAGGATCAAGAAAGGACAA 60.615 50.000 0.00 0.00 33.17 3.18
5313 5621 3.003480 CCGAGGATCAAGAAAGGACAAC 58.997 50.000 0.00 0.00 33.17 3.32
5314 5622 3.557054 CCGAGGATCAAGAAAGGACAACA 60.557 47.826 0.00 0.00 33.17 3.33
5315 5623 3.681897 CGAGGATCAAGAAAGGACAACAG 59.318 47.826 0.00 0.00 33.17 3.16
5316 5624 3.416156 AGGATCAAGAAAGGACAACAGC 58.584 45.455 0.00 0.00 0.00 4.40
5317 5625 2.160417 GGATCAAGAAAGGACAACAGCG 59.840 50.000 0.00 0.00 0.00 5.18
5318 5626 2.613026 TCAAGAAAGGACAACAGCGA 57.387 45.000 0.00 0.00 0.00 4.93
5319 5627 2.483876 TCAAGAAAGGACAACAGCGAG 58.516 47.619 0.00 0.00 0.00 5.03
5320 5628 1.069636 CAAGAAAGGACAACAGCGAGC 60.070 52.381 0.00 0.00 0.00 5.03
5321 5629 0.106708 AGAAAGGACAACAGCGAGCA 59.893 50.000 0.00 0.00 0.00 4.26
5322 5630 0.235926 GAAAGGACAACAGCGAGCAC 59.764 55.000 0.00 0.00 0.00 4.40
5323 5631 1.166531 AAAGGACAACAGCGAGCACC 61.167 55.000 0.00 0.00 0.00 5.01
5324 5632 3.414700 GGACAACAGCGAGCACCG 61.415 66.667 0.00 0.00 42.21 4.94
5325 5633 3.414700 GACAACAGCGAGCACCGG 61.415 66.667 0.00 0.00 39.04 5.28
5326 5634 3.858868 GACAACAGCGAGCACCGGA 62.859 63.158 9.46 0.00 39.04 5.14
5327 5635 3.114616 CAACAGCGAGCACCGGAG 61.115 66.667 9.46 0.00 39.04 4.63
5340 5648 4.891566 CGGAGGAGAACAACGAGG 57.108 61.111 0.00 0.00 0.00 4.63
5341 5649 2.264124 CGGAGGAGAACAACGAGGA 58.736 57.895 0.00 0.00 0.00 3.71
5342 5650 0.601558 CGGAGGAGAACAACGAGGAA 59.398 55.000 0.00 0.00 0.00 3.36
5343 5651 1.402984 CGGAGGAGAACAACGAGGAAG 60.403 57.143 0.00 0.00 0.00 3.46
5344 5652 1.673329 GGAGGAGAACAACGAGGAAGC 60.673 57.143 0.00 0.00 0.00 3.86
5345 5653 1.000955 GAGGAGAACAACGAGGAAGCA 59.999 52.381 0.00 0.00 0.00 3.91
5346 5654 1.001406 AGGAGAACAACGAGGAAGCAG 59.999 52.381 0.00 0.00 0.00 4.24
5347 5655 0.793250 GAGAACAACGAGGAAGCAGC 59.207 55.000 0.00 0.00 0.00 5.25
5348 5656 0.603975 AGAACAACGAGGAAGCAGCC 60.604 55.000 0.00 0.00 0.00 4.85
5349 5657 0.884704 GAACAACGAGGAAGCAGCCA 60.885 55.000 0.00 0.00 0.00 4.75
5350 5658 0.250901 AACAACGAGGAAGCAGCCAT 60.251 50.000 0.00 0.00 0.00 4.40
5351 5659 0.957395 ACAACGAGGAAGCAGCCATG 60.957 55.000 0.00 0.00 0.00 3.66
5352 5660 0.957395 CAACGAGGAAGCAGCCATGT 60.957 55.000 0.00 0.00 0.00 3.21
5353 5661 0.674895 AACGAGGAAGCAGCCATGTC 60.675 55.000 0.00 0.00 0.00 3.06
5354 5662 1.220206 CGAGGAAGCAGCCATGTCT 59.780 57.895 0.00 0.00 0.00 3.41
5355 5663 1.088340 CGAGGAAGCAGCCATGTCTG 61.088 60.000 0.00 0.00 37.15 3.51
5356 5664 0.035630 GAGGAAGCAGCCATGTCTGT 60.036 55.000 5.53 0.00 36.49 3.41
5357 5665 0.403271 AGGAAGCAGCCATGTCTGTT 59.597 50.000 5.53 0.00 36.49 3.16
5358 5666 0.524862 GGAAGCAGCCATGTCTGTTG 59.475 55.000 5.53 0.00 36.49 3.33
5359 5667 1.527034 GAAGCAGCCATGTCTGTTGA 58.473 50.000 5.53 0.00 36.49 3.18
5360 5668 2.089980 GAAGCAGCCATGTCTGTTGAT 58.910 47.619 5.53 0.00 36.49 2.57
5361 5669 2.211250 AGCAGCCATGTCTGTTGATT 57.789 45.000 5.53 0.00 36.49 2.57
5362 5670 1.816835 AGCAGCCATGTCTGTTGATTG 59.183 47.619 5.53 0.00 36.49 2.67
5363 5671 1.135199 GCAGCCATGTCTGTTGATTGG 60.135 52.381 5.53 0.00 36.49 3.16
5364 5672 2.165167 CAGCCATGTCTGTTGATTGGT 58.835 47.619 0.00 0.00 33.50 3.67
5365 5673 2.094906 CAGCCATGTCTGTTGATTGGTG 60.095 50.000 0.00 0.00 33.50 4.17
5366 5674 2.161855 GCCATGTCTGTTGATTGGTGA 58.838 47.619 0.00 0.00 33.50 4.02
5367 5675 2.163010 GCCATGTCTGTTGATTGGTGAG 59.837 50.000 0.00 0.00 33.50 3.51
5368 5676 3.678289 CCATGTCTGTTGATTGGTGAGA 58.322 45.455 0.00 0.00 0.00 3.27
5369 5677 3.688185 CCATGTCTGTTGATTGGTGAGAG 59.312 47.826 0.00 0.00 0.00 3.20
5370 5678 3.407424 TGTCTGTTGATTGGTGAGAGG 57.593 47.619 0.00 0.00 0.00 3.69
5371 5679 2.038952 TGTCTGTTGATTGGTGAGAGGG 59.961 50.000 0.00 0.00 0.00 4.30
5372 5680 2.303022 GTCTGTTGATTGGTGAGAGGGA 59.697 50.000 0.00 0.00 0.00 4.20
5373 5681 2.303022 TCTGTTGATTGGTGAGAGGGAC 59.697 50.000 0.00 0.00 0.00 4.46
5374 5682 2.038952 CTGTTGATTGGTGAGAGGGACA 59.961 50.000 0.00 0.00 0.00 4.02
5375 5683 2.441375 TGTTGATTGGTGAGAGGGACAA 59.559 45.455 0.00 0.00 0.00 3.18
5376 5684 3.077359 GTTGATTGGTGAGAGGGACAAG 58.923 50.000 0.00 0.00 0.00 3.16
5377 5685 1.630369 TGATTGGTGAGAGGGACAAGG 59.370 52.381 0.00 0.00 0.00 3.61
5378 5686 0.995024 ATTGGTGAGAGGGACAAGGG 59.005 55.000 0.00 0.00 0.00 3.95
5379 5687 1.779061 TTGGTGAGAGGGACAAGGGC 61.779 60.000 0.00 0.00 0.00 5.19
5380 5688 2.266055 GTGAGAGGGACAAGGGCG 59.734 66.667 0.00 0.00 0.00 6.13
5381 5689 2.119611 TGAGAGGGACAAGGGCGA 59.880 61.111 0.00 0.00 0.00 5.54
5382 5690 1.306141 TGAGAGGGACAAGGGCGAT 60.306 57.895 0.00 0.00 0.00 4.58
5383 5691 1.144936 GAGAGGGACAAGGGCGATG 59.855 63.158 0.00 0.00 0.00 3.84
5384 5692 2.190578 GAGGGACAAGGGCGATGG 59.809 66.667 0.00 0.00 0.00 3.51
5385 5693 2.610859 AGGGACAAGGGCGATGGT 60.611 61.111 0.00 0.00 0.00 3.55
5386 5694 2.438434 GGGACAAGGGCGATGGTG 60.438 66.667 0.00 0.00 0.00 4.17
5387 5695 2.668632 GGACAAGGGCGATGGTGA 59.331 61.111 0.00 0.00 0.00 4.02
5388 5696 1.745489 GGACAAGGGCGATGGTGAC 60.745 63.158 0.00 0.00 0.00 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 3.472652 TCATCAGGTGGTGTGTGTTTAC 58.527 45.455 0.00 0.00 0.00 2.01
12 13 1.004628 TGTTCCCATCATCAGGTGGTG 59.995 52.381 0.00 0.00 38.74 4.17
47 50 7.556275 ACTCAACAATTTTAGTTCTGAACCTCA 59.444 33.333 16.48 0.29 0.00 3.86
66 69 2.023673 CCTTTGCTGGTCAACTCAACA 58.976 47.619 0.00 0.00 33.73 3.33
72 75 5.391312 ACATAATTCCTTTGCTGGTCAAC 57.609 39.130 0.00 0.00 33.73 3.18
134 146 1.117150 TGCCCGATTACTGTACCTCC 58.883 55.000 0.00 0.00 0.00 4.30
254 266 2.890371 GGCTGCCTCTTTGCATGG 59.110 61.111 12.43 0.00 41.16 3.66
303 315 8.776470 TGTTAGGTTAACCTTCTAAATGTTTCG 58.224 33.333 31.47 0.00 46.09 3.46
329 341 1.608590 CGCATGACCCTTTCTTTGTGT 59.391 47.619 0.00 0.00 0.00 3.72
331 343 1.880027 GACGCATGACCCTTTCTTTGT 59.120 47.619 0.00 0.00 0.00 2.83
370 383 3.064931 GGTTGACAGTGGCTGTTACTAC 58.935 50.000 0.00 0.00 45.44 2.73
371 384 2.038033 GGGTTGACAGTGGCTGTTACTA 59.962 50.000 0.00 0.00 45.44 1.82
410 433 4.517832 GGTAAACCTGGTTCCTTTGTACTG 59.482 45.833 13.36 0.00 0.00 2.74
437 460 0.107263 TTGTGCAGTGTCAGGCTCAA 60.107 50.000 8.89 8.89 40.08 3.02
577 601 0.328258 GACAGTGCCCCTAACCACAT 59.672 55.000 0.00 0.00 34.48 3.21
579 603 0.328258 ATGACAGTGCCCCTAACCAC 59.672 55.000 0.00 0.00 0.00 4.16
580 604 0.327924 CATGACAGTGCCCCTAACCA 59.672 55.000 0.00 0.00 0.00 3.67
582 606 1.032114 GCCATGACAGTGCCCCTAAC 61.032 60.000 0.00 0.00 0.00 2.34
729 773 1.000060 GATTTTGGCTTCTGCAGTGCA 60.000 47.619 26.29 18.58 41.91 4.57
753 797 8.364142 TCCCGTTTGTTTTTATCATCAAAATCT 58.636 29.630 0.00 0.00 32.81 2.40
756 800 8.894768 AATCCCGTTTGTTTTTATCATCAAAA 57.105 26.923 0.00 0.00 32.81 2.44
921 971 3.768757 GGATGGATGGTTTGATTTGGTGA 59.231 43.478 0.00 0.00 0.00 4.02
929 979 0.107897 CGGACGGATGGATGGTTTGA 60.108 55.000 0.00 0.00 0.00 2.69
940 991 2.570181 GTGGACGAACGGACGGAT 59.430 61.111 8.20 0.00 37.61 4.18
971 1022 4.838486 GACCGACGAGGCGAGCTG 62.838 72.222 0.00 0.00 46.52 4.24
1305 1365 2.737376 GTGAGGTTCGTGCCGGAC 60.737 66.667 5.05 0.00 34.15 4.79
2059 2119 3.426568 GCAGTTGGACAGCTCCGC 61.427 66.667 0.00 0.00 39.88 5.54
2247 2307 1.232621 GCCCGGTGAGGTTGTTGTAC 61.233 60.000 0.00 0.00 38.74 2.90
2520 2580 0.904865 TGGAGTGCAGGTCGAGGAAT 60.905 55.000 0.00 0.00 0.00 3.01
2745 2805 0.874175 CACCAGAGAACGCGTTGTCA 60.874 55.000 39.36 0.00 35.56 3.58
3106 3166 4.722700 GGCCAGCACGGACATGGT 62.723 66.667 0.00 0.00 45.64 3.55
3498 3570 1.134670 GGCAGGTAGCTGTAGAACAGG 60.135 57.143 22.21 0.00 46.01 4.00
3847 3934 1.059692 CAGTACGATCTTGCAAGTGCG 59.940 52.381 28.59 28.59 45.83 5.34
3875 4080 4.974645 ATCAGGTTCAAACTGTACTCCA 57.025 40.909 1.39 0.00 37.25 3.86
3876 4081 5.063880 ACAATCAGGTTCAAACTGTACTCC 58.936 41.667 1.39 0.00 37.25 3.85
3877 4082 6.619801 AACAATCAGGTTCAAACTGTACTC 57.380 37.500 1.39 0.00 37.25 2.59
3880 4085 7.581213 ATCAAACAATCAGGTTCAAACTGTA 57.419 32.000 1.39 0.00 37.25 2.74
3884 4089 7.538303 AACAATCAAACAATCAGGTTCAAAC 57.462 32.000 0.00 0.00 0.00 2.93
3901 4106 6.979817 CCAGACAAAAATGTCAGAAACAATCA 59.020 34.615 11.17 0.00 42.37 2.57
3902 4107 6.980397 ACCAGACAAAAATGTCAGAAACAATC 59.020 34.615 11.17 0.00 42.37 2.67
3903 4108 6.877236 ACCAGACAAAAATGTCAGAAACAAT 58.123 32.000 11.17 0.00 42.37 2.71
3904 4109 6.279513 ACCAGACAAAAATGTCAGAAACAA 57.720 33.333 11.17 0.00 42.37 2.83
3905 4110 5.913137 ACCAGACAAAAATGTCAGAAACA 57.087 34.783 11.17 0.00 43.51 2.83
3906 4111 7.595311 AAAACCAGACAAAAATGTCAGAAAC 57.405 32.000 11.17 0.00 41.02 2.78
3907 4112 7.118971 CCAAAAACCAGACAAAAATGTCAGAAA 59.881 33.333 11.17 0.00 41.02 2.52
3908 4113 6.593382 CCAAAAACCAGACAAAAATGTCAGAA 59.407 34.615 11.17 0.00 41.02 3.02
4547 4831 7.506114 TCGATTGATTAATTACTTACCAGGCT 58.494 34.615 0.00 0.00 0.00 4.58
4550 4835 9.712305 ATCCTCGATTGATTAATTACTTACCAG 57.288 33.333 0.00 0.00 0.00 4.00
4573 4862 9.209175 GATGATTGATTACACCTAAGTACATCC 57.791 37.037 0.00 0.00 0.00 3.51
4575 4864 9.988815 GAGATGATTGATTACACCTAAGTACAT 57.011 33.333 0.00 0.00 0.00 2.29
4592 4881 3.877559 TGTACAAGGCCAGAGATGATTG 58.122 45.455 5.01 0.00 0.00 2.67
4620 4909 2.496899 AGAACCAAGATTCATGCCGT 57.503 45.000 0.00 0.00 0.00 5.68
4623 4912 4.488879 GACCAAAGAACCAAGATTCATGC 58.511 43.478 0.00 0.00 0.00 4.06
4704 4996 0.331616 AGGTCCCAATTCGGAAAGGG 59.668 55.000 19.99 19.99 42.86 3.95
4737 5029 0.106708 AGCGAGCAAGTCCAAACAGA 59.893 50.000 0.00 0.00 0.00 3.41
4738 5038 0.947244 AAGCGAGCAAGTCCAAACAG 59.053 50.000 0.00 0.00 0.00 3.16
4759 5059 0.812811 TCCATCTCGATGCAGCAAGC 60.813 55.000 1.53 0.00 45.96 4.01
4760 5060 0.935898 GTCCATCTCGATGCAGCAAG 59.064 55.000 1.53 0.00 37.49 4.01
4761 5061 0.249955 TGTCCATCTCGATGCAGCAA 59.750 50.000 1.53 0.00 37.49 3.91
4762 5062 0.466963 ATGTCCATCTCGATGCAGCA 59.533 50.000 1.53 0.00 37.49 4.41
4763 5063 0.866427 CATGTCCATCTCGATGCAGC 59.134 55.000 0.00 0.00 37.49 5.25
4764 5064 2.133553 GTCATGTCCATCTCGATGCAG 58.866 52.381 1.37 0.00 37.49 4.41
4765 5065 1.758862 AGTCATGTCCATCTCGATGCA 59.241 47.619 1.37 0.00 37.49 3.96
4766 5066 2.522836 AGTCATGTCCATCTCGATGC 57.477 50.000 1.37 0.00 37.49 3.91
4767 5067 2.543012 GCAAGTCATGTCCATCTCGATG 59.457 50.000 0.00 0.00 38.51 3.84
4768 5068 2.433604 AGCAAGTCATGTCCATCTCGAT 59.566 45.455 0.00 0.00 0.00 3.59
4769 5069 1.827344 AGCAAGTCATGTCCATCTCGA 59.173 47.619 0.00 0.00 0.00 4.04
4770 5070 1.931841 CAGCAAGTCATGTCCATCTCG 59.068 52.381 0.00 0.00 0.00 4.04
4771 5071 3.257469 TCAGCAAGTCATGTCCATCTC 57.743 47.619 0.00 0.00 0.00 2.75
4772 5072 3.199289 TCATCAGCAAGTCATGTCCATCT 59.801 43.478 0.00 0.00 0.00 2.90
4773 5073 3.538591 TCATCAGCAAGTCATGTCCATC 58.461 45.455 0.00 0.00 0.00 3.51
4780 5080 3.021695 CCACCAATCATCAGCAAGTCAT 58.978 45.455 0.00 0.00 0.00 3.06
4883 5183 2.154074 GGAGAACCCACCCCACTGT 61.154 63.158 0.00 0.00 34.14 3.55
4961 5265 2.099921 CACTCTGTCTATAAGGCGCACT 59.900 50.000 10.83 0.02 0.00 4.40
4964 5268 2.733517 GACACTCTGTCTATAAGGCGC 58.266 52.381 0.00 0.00 43.73 6.53
4965 5269 2.612672 TCGACACTCTGTCTATAAGGCG 59.387 50.000 1.14 0.00 44.85 5.52
4966 5270 4.839668 ATCGACACTCTGTCTATAAGGC 57.160 45.455 0.00 0.00 44.85 4.35
4967 5271 7.260558 TGTAATCGACACTCTGTCTATAAGG 57.739 40.000 0.00 0.00 44.85 2.69
4968 5272 8.613482 TCTTGTAATCGACACTCTGTCTATAAG 58.387 37.037 0.00 2.07 44.85 1.73
4970 5274 8.502105 TTCTTGTAATCGACACTCTGTCTATA 57.498 34.615 0.00 0.00 44.85 1.31
4971 5275 7.392494 TTCTTGTAATCGACACTCTGTCTAT 57.608 36.000 0.00 0.00 44.85 1.98
4972 5276 6.812879 TTCTTGTAATCGACACTCTGTCTA 57.187 37.500 0.00 0.00 44.85 2.59
4973 5277 5.707242 TTCTTGTAATCGACACTCTGTCT 57.293 39.130 0.00 0.00 44.85 3.41
4974 5278 6.421202 AGTTTTCTTGTAATCGACACTCTGTC 59.579 38.462 0.00 0.00 43.65 3.51
4975 5279 6.281405 AGTTTTCTTGTAATCGACACTCTGT 58.719 36.000 0.00 0.00 37.96 3.41
4976 5280 6.771188 AGTTTTCTTGTAATCGACACTCTG 57.229 37.500 0.00 0.00 37.96 3.35
4979 5283 8.088981 AGTGATAGTTTTCTTGTAATCGACACT 58.911 33.333 0.00 0.00 37.96 3.55
4980 5284 8.240883 AGTGATAGTTTTCTTGTAATCGACAC 57.759 34.615 0.00 0.00 37.96 3.67
4981 5285 7.272731 CGAGTGATAGTTTTCTTGTAATCGACA 59.727 37.037 0.00 0.00 35.78 4.35
4985 5293 7.394872 CAGCGAGTGATAGTTTTCTTGTAATC 58.605 38.462 0.00 0.00 0.00 1.75
4994 5302 2.363788 TCGCAGCGAGTGATAGTTTT 57.636 45.000 15.11 0.00 0.00 2.43
5001 5309 2.355837 GGTGTTCGCAGCGAGTGA 60.356 61.111 18.62 0.00 37.14 3.41
5022 5330 2.611722 CGGATGTGGTGTGTGTGATACA 60.612 50.000 0.00 0.00 36.82 2.29
5023 5331 1.999735 CGGATGTGGTGTGTGTGATAC 59.000 52.381 0.00 0.00 0.00 2.24
5024 5332 1.066502 CCGGATGTGGTGTGTGTGATA 60.067 52.381 0.00 0.00 0.00 2.15
5025 5333 0.321564 CCGGATGTGGTGTGTGTGAT 60.322 55.000 0.00 0.00 0.00 3.06
5026 5334 1.070615 CCGGATGTGGTGTGTGTGA 59.929 57.895 0.00 0.00 0.00 3.58
5027 5335 1.965930 CCCGGATGTGGTGTGTGTG 60.966 63.158 0.73 0.00 0.00 3.82
5028 5336 1.701031 TTCCCGGATGTGGTGTGTGT 61.701 55.000 0.73 0.00 0.00 3.72
5029 5337 0.536233 TTTCCCGGATGTGGTGTGTG 60.536 55.000 0.73 0.00 0.00 3.82
5030 5338 0.250727 CTTTCCCGGATGTGGTGTGT 60.251 55.000 0.73 0.00 0.00 3.72
5031 5339 0.036164 TCTTTCCCGGATGTGGTGTG 59.964 55.000 0.73 0.00 0.00 3.82
5032 5340 0.036306 GTCTTTCCCGGATGTGGTGT 59.964 55.000 0.73 0.00 0.00 4.16
5033 5341 0.676782 GGTCTTTCCCGGATGTGGTG 60.677 60.000 0.73 0.00 0.00 4.17
5034 5342 1.131303 TGGTCTTTCCCGGATGTGGT 61.131 55.000 0.73 0.00 34.77 4.16
5035 5343 0.037590 TTGGTCTTTCCCGGATGTGG 59.962 55.000 0.73 0.00 34.77 4.17
5036 5344 1.812571 CTTTGGTCTTTCCCGGATGTG 59.187 52.381 0.73 0.00 34.77 3.21
5037 5345 1.702957 TCTTTGGTCTTTCCCGGATGT 59.297 47.619 0.73 0.00 34.77 3.06
5038 5346 2.084546 GTCTTTGGTCTTTCCCGGATG 58.915 52.381 0.73 0.00 34.77 3.51
5039 5347 1.985895 AGTCTTTGGTCTTTCCCGGAT 59.014 47.619 0.73 0.00 34.77 4.18
5040 5348 1.071699 CAGTCTTTGGTCTTTCCCGGA 59.928 52.381 0.73 0.00 34.77 5.14
5041 5349 1.523758 CAGTCTTTGGTCTTTCCCGG 58.476 55.000 0.00 0.00 34.77 5.73
5042 5350 1.523758 CCAGTCTTTGGTCTTTCCCG 58.476 55.000 0.00 0.00 42.41 5.14
5052 5360 2.908073 GCGGTGGTGCCAGTCTTTG 61.908 63.158 0.00 0.00 36.97 2.77
5053 5361 2.594592 GCGGTGGTGCCAGTCTTT 60.595 61.111 0.00 0.00 36.97 2.52
5054 5362 2.902423 TTTGCGGTGGTGCCAGTCTT 62.902 55.000 0.00 0.00 36.97 3.01
5055 5363 3.414136 TTTGCGGTGGTGCCAGTCT 62.414 57.895 0.00 0.00 36.97 3.24
5056 5364 2.904866 TTTGCGGTGGTGCCAGTC 60.905 61.111 0.00 0.00 36.97 3.51
5057 5365 2.906897 CTTTGCGGTGGTGCCAGT 60.907 61.111 0.00 0.00 36.97 4.00
5058 5366 4.347453 GCTTTGCGGTGGTGCCAG 62.347 66.667 0.00 0.00 36.97 4.85
5060 5368 3.438017 TTTGCTTTGCGGTGGTGCC 62.438 57.895 0.00 0.00 0.00 5.01
5061 5369 2.105930 TTTGCTTTGCGGTGGTGC 59.894 55.556 0.00 0.00 0.00 5.01
5062 5370 0.665835 TAGTTTGCTTTGCGGTGGTG 59.334 50.000 0.00 0.00 0.00 4.17
5063 5371 1.616159 ATAGTTTGCTTTGCGGTGGT 58.384 45.000 0.00 0.00 0.00 4.16
5064 5372 3.057876 TGTTATAGTTTGCTTTGCGGTGG 60.058 43.478 0.00 0.00 0.00 4.61
5065 5373 3.911964 GTGTTATAGTTTGCTTTGCGGTG 59.088 43.478 0.00 0.00 0.00 4.94
5066 5374 3.566322 TGTGTTATAGTTTGCTTTGCGGT 59.434 39.130 0.00 0.00 0.00 5.68
5067 5375 4.153958 TGTGTTATAGTTTGCTTTGCGG 57.846 40.909 0.00 0.00 0.00 5.69
5068 5376 6.345723 CCTTTTGTGTTATAGTTTGCTTTGCG 60.346 38.462 0.00 0.00 0.00 4.85
5069 5377 6.073819 CCCTTTTGTGTTATAGTTTGCTTTGC 60.074 38.462 0.00 0.00 0.00 3.68
5070 5378 6.073819 GCCCTTTTGTGTTATAGTTTGCTTTG 60.074 38.462 0.00 0.00 0.00 2.77
5071 5379 5.989168 GCCCTTTTGTGTTATAGTTTGCTTT 59.011 36.000 0.00 0.00 0.00 3.51
5072 5380 5.510690 GGCCCTTTTGTGTTATAGTTTGCTT 60.511 40.000 0.00 0.00 0.00 3.91
5073 5381 4.021456 GGCCCTTTTGTGTTATAGTTTGCT 60.021 41.667 0.00 0.00 0.00 3.91
5074 5382 4.021456 AGGCCCTTTTGTGTTATAGTTTGC 60.021 41.667 0.00 0.00 0.00 3.68
5075 5383 5.010617 ACAGGCCCTTTTGTGTTATAGTTTG 59.989 40.000 0.00 0.00 0.00 2.93
5076 5384 5.144832 ACAGGCCCTTTTGTGTTATAGTTT 58.855 37.500 0.00 0.00 0.00 2.66
5077 5385 4.736473 ACAGGCCCTTTTGTGTTATAGTT 58.264 39.130 0.00 0.00 0.00 2.24
5078 5386 4.332828 GACAGGCCCTTTTGTGTTATAGT 58.667 43.478 0.00 0.00 0.00 2.12
5079 5387 3.694566 GGACAGGCCCTTTTGTGTTATAG 59.305 47.826 0.00 0.00 0.00 1.31
5080 5388 3.332485 AGGACAGGCCCTTTTGTGTTATA 59.668 43.478 0.00 0.00 37.37 0.98
5081 5389 2.110011 AGGACAGGCCCTTTTGTGTTAT 59.890 45.455 0.00 0.00 37.37 1.89
5082 5390 1.497286 AGGACAGGCCCTTTTGTGTTA 59.503 47.619 0.00 0.00 37.37 2.41
5083 5391 0.261696 AGGACAGGCCCTTTTGTGTT 59.738 50.000 0.00 0.00 37.37 3.32
5084 5392 1.145571 TAGGACAGGCCCTTTTGTGT 58.854 50.000 0.00 0.00 37.74 3.72
5085 5393 2.286365 TTAGGACAGGCCCTTTTGTG 57.714 50.000 0.00 0.00 37.74 3.33
5086 5394 2.649816 AGATTAGGACAGGCCCTTTTGT 59.350 45.455 0.00 0.00 37.74 2.83
5087 5395 3.372440 AGATTAGGACAGGCCCTTTTG 57.628 47.619 0.00 0.00 37.74 2.44
5088 5396 5.734031 ATTAGATTAGGACAGGCCCTTTT 57.266 39.130 0.00 0.00 37.74 2.27
5089 5397 5.670361 TGTATTAGATTAGGACAGGCCCTTT 59.330 40.000 0.00 0.00 37.74 3.11
5090 5398 5.071923 GTGTATTAGATTAGGACAGGCCCTT 59.928 44.000 0.00 0.00 37.74 3.95
5091 5399 4.593634 GTGTATTAGATTAGGACAGGCCCT 59.406 45.833 0.00 0.00 40.29 5.19
5092 5400 4.560919 CGTGTATTAGATTAGGACAGGCCC 60.561 50.000 0.00 0.00 37.37 5.80
5093 5401 4.280174 TCGTGTATTAGATTAGGACAGGCC 59.720 45.833 0.00 0.00 0.00 5.19
5094 5402 5.221130 GTCGTGTATTAGATTAGGACAGGC 58.779 45.833 0.00 0.00 0.00 4.85
5095 5403 6.207213 GTGTCGTGTATTAGATTAGGACAGG 58.793 44.000 0.00 0.00 38.23 4.00
5096 5404 6.207213 GGTGTCGTGTATTAGATTAGGACAG 58.793 44.000 0.00 0.00 38.23 3.51
5097 5405 5.220912 CGGTGTCGTGTATTAGATTAGGACA 60.221 44.000 0.00 0.00 36.11 4.02
5098 5406 5.210715 CGGTGTCGTGTATTAGATTAGGAC 58.789 45.833 0.00 0.00 0.00 3.85
5099 5407 4.261322 GCGGTGTCGTGTATTAGATTAGGA 60.261 45.833 0.00 0.00 38.89 2.94
5100 5408 3.979495 GCGGTGTCGTGTATTAGATTAGG 59.021 47.826 0.00 0.00 38.89 2.69
5101 5409 3.662645 CGCGGTGTCGTGTATTAGATTAG 59.337 47.826 0.00 0.00 41.47 1.73
5102 5410 3.620761 CGCGGTGTCGTGTATTAGATTA 58.379 45.455 0.00 0.00 41.47 1.75
5103 5411 2.456989 CGCGGTGTCGTGTATTAGATT 58.543 47.619 0.00 0.00 41.47 2.40
5104 5412 2.115348 CGCGGTGTCGTGTATTAGAT 57.885 50.000 0.00 0.00 41.47 1.98
5105 5413 3.609604 CGCGGTGTCGTGTATTAGA 57.390 52.632 0.00 0.00 41.47 2.10
5131 5439 3.851845 TTGAAGGTGACCGGCGTCG 62.852 63.158 0.29 0.29 42.37 5.12
5132 5440 1.566018 CTTTGAAGGTGACCGGCGTC 61.566 60.000 6.01 4.26 39.66 5.19
5133 5441 1.597027 CTTTGAAGGTGACCGGCGT 60.597 57.895 6.01 0.00 0.00 5.68
5134 5442 1.301401 TCTTTGAAGGTGACCGGCG 60.301 57.895 0.00 0.00 0.00 6.46
5135 5443 1.235281 GGTCTTTGAAGGTGACCGGC 61.235 60.000 0.00 0.00 40.44 6.13
5136 5444 2.928416 GGTCTTTGAAGGTGACCGG 58.072 57.895 0.00 0.00 40.44 5.28
5139 5447 4.338379 AGTAGTGGTCTTTGAAGGTGAC 57.662 45.455 0.00 0.00 0.00 3.67
5140 5448 4.654262 AGAAGTAGTGGTCTTTGAAGGTGA 59.346 41.667 0.00 0.00 0.00 4.02
5141 5449 4.752101 CAGAAGTAGTGGTCTTTGAAGGTG 59.248 45.833 0.00 0.00 0.00 4.00
5142 5450 4.743955 GCAGAAGTAGTGGTCTTTGAAGGT 60.744 45.833 0.00 0.00 0.00 3.50
5143 5451 3.748568 GCAGAAGTAGTGGTCTTTGAAGG 59.251 47.826 0.00 0.00 0.00 3.46
5144 5452 4.380531 TGCAGAAGTAGTGGTCTTTGAAG 58.619 43.478 0.00 0.00 0.00 3.02
5145 5453 4.100963 TCTGCAGAAGTAGTGGTCTTTGAA 59.899 41.667 15.67 0.00 0.00 2.69
5146 5454 3.641436 TCTGCAGAAGTAGTGGTCTTTGA 59.359 43.478 15.67 0.00 0.00 2.69
5147 5455 3.993081 CTCTGCAGAAGTAGTGGTCTTTG 59.007 47.826 18.85 0.00 0.00 2.77
5148 5456 3.556004 GCTCTGCAGAAGTAGTGGTCTTT 60.556 47.826 18.85 0.00 0.00 2.52
5149 5457 2.028567 GCTCTGCAGAAGTAGTGGTCTT 60.029 50.000 18.85 0.00 0.00 3.01
5150 5458 1.548269 GCTCTGCAGAAGTAGTGGTCT 59.452 52.381 18.85 0.00 0.00 3.85
5151 5459 1.548269 AGCTCTGCAGAAGTAGTGGTC 59.452 52.381 18.85 1.17 27.96 4.02
5152 5460 1.638529 AGCTCTGCAGAAGTAGTGGT 58.361 50.000 18.85 7.58 0.00 4.16
5153 5461 2.233431 AGAAGCTCTGCAGAAGTAGTGG 59.767 50.000 18.85 5.15 0.00 4.00
5154 5462 3.193267 AGAGAAGCTCTGCAGAAGTAGTG 59.807 47.826 18.85 5.93 39.62 2.74
5155 5463 3.430453 AGAGAAGCTCTGCAGAAGTAGT 58.570 45.455 18.85 2.41 39.62 2.73
5156 5464 4.454728 AAGAGAAGCTCTGCAGAAGTAG 57.545 45.455 18.85 7.12 40.28 2.57
5157 5465 5.220951 CGATAAGAGAAGCTCTGCAGAAGTA 60.221 44.000 18.85 0.00 40.28 2.24
5158 5466 4.439974 CGATAAGAGAAGCTCTGCAGAAGT 60.440 45.833 18.85 4.64 40.28 3.01
5159 5467 4.043750 CGATAAGAGAAGCTCTGCAGAAG 58.956 47.826 18.85 12.76 40.28 2.85
5160 5468 3.696548 TCGATAAGAGAAGCTCTGCAGAA 59.303 43.478 18.85 0.00 40.28 3.02
5161 5469 3.066064 GTCGATAAGAGAAGCTCTGCAGA 59.934 47.826 17.19 17.19 40.28 4.26
5162 5470 3.371168 GTCGATAAGAGAAGCTCTGCAG 58.629 50.000 7.63 7.63 40.28 4.41
5163 5471 2.223363 CGTCGATAAGAGAAGCTCTGCA 60.223 50.000 0.00 0.00 40.28 4.41
5164 5472 2.380660 CGTCGATAAGAGAAGCTCTGC 58.619 52.381 0.00 0.00 40.28 4.26
5165 5473 2.223363 TGCGTCGATAAGAGAAGCTCTG 60.223 50.000 0.00 0.00 40.28 3.35
5166 5474 2.017782 TGCGTCGATAAGAGAAGCTCT 58.982 47.619 0.00 0.00 43.37 4.09
5167 5475 2.476873 TGCGTCGATAAGAGAAGCTC 57.523 50.000 0.00 0.00 42.20 4.09
5168 5476 2.359214 TGATGCGTCGATAAGAGAAGCT 59.641 45.455 0.58 0.00 42.20 3.74
5169 5477 2.732366 TGATGCGTCGATAAGAGAAGC 58.268 47.619 0.58 0.00 42.08 3.86
5170 5478 3.917380 GGATGATGCGTCGATAAGAGAAG 59.083 47.826 0.58 0.00 0.00 2.85
5171 5479 3.317993 TGGATGATGCGTCGATAAGAGAA 59.682 43.478 0.58 0.00 0.00 2.87
5172 5480 2.884639 TGGATGATGCGTCGATAAGAGA 59.115 45.455 0.58 0.00 0.00 3.10
5173 5481 2.983136 GTGGATGATGCGTCGATAAGAG 59.017 50.000 0.58 0.00 0.00 2.85
5174 5482 2.623416 AGTGGATGATGCGTCGATAAGA 59.377 45.455 0.58 0.00 0.00 2.10
5175 5483 2.983136 GAGTGGATGATGCGTCGATAAG 59.017 50.000 0.58 0.00 0.00 1.73
5176 5484 2.623416 AGAGTGGATGATGCGTCGATAA 59.377 45.455 0.58 0.00 0.00 1.75
5177 5485 2.030805 CAGAGTGGATGATGCGTCGATA 60.031 50.000 0.58 0.00 0.00 2.92
5178 5486 1.035923 AGAGTGGATGATGCGTCGAT 58.964 50.000 0.58 0.00 0.00 3.59
5179 5487 0.101219 CAGAGTGGATGATGCGTCGA 59.899 55.000 0.58 0.00 0.00 4.20
5180 5488 0.101219 TCAGAGTGGATGATGCGTCG 59.899 55.000 0.58 0.00 0.00 5.12
5181 5489 1.850377 CTCAGAGTGGATGATGCGTC 58.150 55.000 0.00 0.00 0.00 5.19
5182 5490 0.179089 GCTCAGAGTGGATGATGCGT 60.179 55.000 0.00 0.00 0.00 5.24
5183 5491 1.213733 CGCTCAGAGTGGATGATGCG 61.214 60.000 2.68 0.00 37.68 4.73
5184 5492 1.497223 GCGCTCAGAGTGGATGATGC 61.497 60.000 13.02 0.00 0.00 3.91
5185 5493 0.879400 GGCGCTCAGAGTGGATGATG 60.879 60.000 13.02 0.00 0.00 3.07
5186 5494 1.047596 AGGCGCTCAGAGTGGATGAT 61.048 55.000 13.02 0.00 0.00 2.45
5187 5495 0.395724 TAGGCGCTCAGAGTGGATGA 60.396 55.000 13.02 0.00 0.00 2.92
5188 5496 0.461548 TTAGGCGCTCAGAGTGGATG 59.538 55.000 13.02 0.00 0.00 3.51
5189 5497 0.749649 CTTAGGCGCTCAGAGTGGAT 59.250 55.000 13.02 0.00 0.00 3.41
5190 5498 0.323451 TCTTAGGCGCTCAGAGTGGA 60.323 55.000 13.02 0.00 0.00 4.02
5191 5499 0.102120 CTCTTAGGCGCTCAGAGTGG 59.898 60.000 13.02 0.00 29.97 4.00
5192 5500 0.102120 CCTCTTAGGCGCTCAGAGTG 59.898 60.000 21.62 6.62 31.91 3.51
5193 5501 0.033991 TCCTCTTAGGCGCTCAGAGT 60.034 55.000 21.62 0.81 31.91 3.24
5194 5502 1.066908 CTTCCTCTTAGGCGCTCAGAG 59.933 57.143 18.51 18.51 34.61 3.35
5195 5503 1.107114 CTTCCTCTTAGGCGCTCAGA 58.893 55.000 7.64 5.43 34.61 3.27
5196 5504 0.820871 ACTTCCTCTTAGGCGCTCAG 59.179 55.000 7.64 0.41 34.61 3.35
5197 5505 0.532573 CACTTCCTCTTAGGCGCTCA 59.467 55.000 7.64 0.00 34.61 4.26
5198 5506 0.818296 TCACTTCCTCTTAGGCGCTC 59.182 55.000 7.64 0.00 34.61 5.03
5199 5507 0.533032 GTCACTTCCTCTTAGGCGCT 59.467 55.000 7.64 0.00 34.61 5.92
5200 5508 0.246635 TGTCACTTCCTCTTAGGCGC 59.753 55.000 0.00 0.00 34.61 6.53
5201 5509 2.028930 ACTTGTCACTTCCTCTTAGGCG 60.029 50.000 0.00 0.00 34.61 5.52
5202 5510 3.330267 CACTTGTCACTTCCTCTTAGGC 58.670 50.000 0.00 0.00 34.61 3.93
5203 5511 3.578716 TCCACTTGTCACTTCCTCTTAGG 59.421 47.826 0.00 0.00 36.46 2.69
5204 5512 4.873746 TCCACTTGTCACTTCCTCTTAG 57.126 45.455 0.00 0.00 0.00 2.18
5205 5513 4.593206 ACATCCACTTGTCACTTCCTCTTA 59.407 41.667 0.00 0.00 0.00 2.10
5206 5514 3.392616 ACATCCACTTGTCACTTCCTCTT 59.607 43.478 0.00 0.00 0.00 2.85
5207 5515 2.975489 ACATCCACTTGTCACTTCCTCT 59.025 45.455 0.00 0.00 0.00 3.69
5208 5516 3.330267 GACATCCACTTGTCACTTCCTC 58.670 50.000 0.00 0.00 44.38 3.71
5209 5517 3.409026 GACATCCACTTGTCACTTCCT 57.591 47.619 0.00 0.00 44.38 3.36
5216 5524 2.672478 CGAGTCCTGACATCCACTTGTC 60.672 54.545 0.00 0.00 45.05 3.18
5217 5525 1.273606 CGAGTCCTGACATCCACTTGT 59.726 52.381 0.00 0.00 0.00 3.16
5218 5526 1.546029 TCGAGTCCTGACATCCACTTG 59.454 52.381 0.00 0.00 0.00 3.16
5219 5527 1.924731 TCGAGTCCTGACATCCACTT 58.075 50.000 0.00 0.00 0.00 3.16
5220 5528 2.028130 GATCGAGTCCTGACATCCACT 58.972 52.381 0.00 0.00 0.00 4.00
5221 5529 1.067821 GGATCGAGTCCTGACATCCAC 59.932 57.143 9.21 0.00 44.16 4.02
5222 5530 1.403814 GGATCGAGTCCTGACATCCA 58.596 55.000 9.21 0.00 44.16 3.41
5232 5540 3.066900 TCTTCTTCGGATTGGATCGAGTC 59.933 47.826 0.00 0.00 36.72 3.36
5233 5541 3.024547 TCTTCTTCGGATTGGATCGAGT 58.975 45.455 0.00 0.00 36.72 4.18
5234 5542 3.181486 TGTCTTCTTCGGATTGGATCGAG 60.181 47.826 0.00 0.00 36.72 4.04
5235 5543 2.758423 TGTCTTCTTCGGATTGGATCGA 59.242 45.455 0.00 0.00 0.00 3.59
5236 5544 2.860735 GTGTCTTCTTCGGATTGGATCG 59.139 50.000 0.00 0.00 0.00 3.69
5237 5545 3.198872 GGTGTCTTCTTCGGATTGGATC 58.801 50.000 0.00 0.00 0.00 3.36
5238 5546 2.418746 CGGTGTCTTCTTCGGATTGGAT 60.419 50.000 0.00 0.00 0.00 3.41
5239 5547 1.067142 CGGTGTCTTCTTCGGATTGGA 60.067 52.381 0.00 0.00 0.00 3.53
5240 5548 1.337823 ACGGTGTCTTCTTCGGATTGG 60.338 52.381 0.00 0.00 0.00 3.16
5241 5549 1.993370 GACGGTGTCTTCTTCGGATTG 59.007 52.381 0.00 0.00 0.00 2.67
5242 5550 1.893801 AGACGGTGTCTTCTTCGGATT 59.106 47.619 0.00 0.00 40.28 3.01
5243 5551 1.546961 AGACGGTGTCTTCTTCGGAT 58.453 50.000 0.00 0.00 40.28 4.18
5244 5552 3.031916 AGACGGTGTCTTCTTCGGA 57.968 52.632 0.00 0.00 40.28 4.55
5252 5560 0.320771 GCATGTCCAAGACGGTGTCT 60.321 55.000 0.00 0.00 45.64 3.41
5253 5561 1.626654 CGCATGTCCAAGACGGTGTC 61.627 60.000 0.00 0.00 34.95 3.67
5254 5562 1.667830 CGCATGTCCAAGACGGTGT 60.668 57.895 0.00 0.00 34.95 4.16
5255 5563 1.374125 TCGCATGTCCAAGACGGTG 60.374 57.895 0.00 0.00 34.95 4.94
5256 5564 1.374252 GTCGCATGTCCAAGACGGT 60.374 57.895 0.00 0.00 34.95 4.83
5257 5565 3.474806 GTCGCATGTCCAAGACGG 58.525 61.111 0.00 0.00 34.95 4.79
5259 5567 2.100631 CCCGTCGCATGTCCAAGAC 61.101 63.158 0.00 0.00 0.00 3.01
5260 5568 2.264480 CCCGTCGCATGTCCAAGA 59.736 61.111 0.00 0.00 0.00 3.02
5261 5569 3.499737 GCCCGTCGCATGTCCAAG 61.500 66.667 0.00 0.00 37.47 3.61
5264 5572 4.501714 TACGCCCGTCGCATGTCC 62.502 66.667 0.00 0.00 43.23 4.02
5265 5573 3.252484 GTACGCCCGTCGCATGTC 61.252 66.667 0.00 0.00 43.23 3.06
5266 5574 3.365291 ATGTACGCCCGTCGCATGT 62.365 57.895 0.00 0.00 43.23 3.21
5267 5575 2.584970 ATGTACGCCCGTCGCATG 60.585 61.111 0.00 0.00 43.23 4.06
5268 5576 2.584970 CATGTACGCCCGTCGCAT 60.585 61.111 0.00 1.05 43.23 4.73
5269 5577 4.805231 CCATGTACGCCCGTCGCA 62.805 66.667 0.00 0.00 43.23 5.10
5271 5579 4.805231 TGCCATGTACGCCCGTCG 62.805 66.667 0.00 0.00 45.38 5.12
5272 5580 3.192922 GTGCCATGTACGCCCGTC 61.193 66.667 0.00 0.00 0.00 4.79
5273 5581 4.770874 GGTGCCATGTACGCCCGT 62.771 66.667 4.58 0.00 0.00 5.28
5285 5593 4.467084 TTGATCCTCGGCGGTGCC 62.467 66.667 7.21 0.00 46.75 5.01
5286 5594 2.852495 TTCTTGATCCTCGGCGGTGC 62.852 60.000 7.21 0.00 0.00 5.01
5287 5595 0.391130 TTTCTTGATCCTCGGCGGTG 60.391 55.000 7.21 0.00 0.00 4.94
5288 5596 0.108138 CTTTCTTGATCCTCGGCGGT 60.108 55.000 7.21 0.00 0.00 5.68
5289 5597 0.811616 CCTTTCTTGATCCTCGGCGG 60.812 60.000 7.21 0.00 0.00 6.13
5290 5598 0.175760 TCCTTTCTTGATCCTCGGCG 59.824 55.000 0.00 0.00 0.00 6.46
5291 5599 1.066143 TGTCCTTTCTTGATCCTCGGC 60.066 52.381 0.00 0.00 0.00 5.54
5292 5600 3.003480 GTTGTCCTTTCTTGATCCTCGG 58.997 50.000 0.00 0.00 0.00 4.63
5293 5601 3.664107 TGTTGTCCTTTCTTGATCCTCG 58.336 45.455 0.00 0.00 0.00 4.63
5294 5602 3.438434 GCTGTTGTCCTTTCTTGATCCTC 59.562 47.826 0.00 0.00 0.00 3.71
5295 5603 3.416156 GCTGTTGTCCTTTCTTGATCCT 58.584 45.455 0.00 0.00 0.00 3.24
5296 5604 2.160417 CGCTGTTGTCCTTTCTTGATCC 59.840 50.000 0.00 0.00 0.00 3.36
5297 5605 3.067106 TCGCTGTTGTCCTTTCTTGATC 58.933 45.455 0.00 0.00 0.00 2.92
5298 5606 3.070018 CTCGCTGTTGTCCTTTCTTGAT 58.930 45.455 0.00 0.00 0.00 2.57
5299 5607 2.483876 CTCGCTGTTGTCCTTTCTTGA 58.516 47.619 0.00 0.00 0.00 3.02
5300 5608 1.069636 GCTCGCTGTTGTCCTTTCTTG 60.070 52.381 0.00 0.00 0.00 3.02
5301 5609 1.230324 GCTCGCTGTTGTCCTTTCTT 58.770 50.000 0.00 0.00 0.00 2.52
5302 5610 0.106708 TGCTCGCTGTTGTCCTTTCT 59.893 50.000 0.00 0.00 0.00 2.52
5303 5611 0.235926 GTGCTCGCTGTTGTCCTTTC 59.764 55.000 0.00 0.00 0.00 2.62
5304 5612 1.166531 GGTGCTCGCTGTTGTCCTTT 61.167 55.000 0.00 0.00 0.00 3.11
5305 5613 1.598130 GGTGCTCGCTGTTGTCCTT 60.598 57.895 0.00 0.00 0.00 3.36
5306 5614 2.031163 GGTGCTCGCTGTTGTCCT 59.969 61.111 0.00 0.00 0.00 3.85
5307 5615 3.414700 CGGTGCTCGCTGTTGTCC 61.415 66.667 0.00 0.00 0.00 4.02
5308 5616 3.414700 CCGGTGCTCGCTGTTGTC 61.415 66.667 0.00 0.00 37.59 3.18
5309 5617 3.865929 CTCCGGTGCTCGCTGTTGT 62.866 63.158 0.00 0.00 37.59 3.32
5310 5618 3.114616 CTCCGGTGCTCGCTGTTG 61.115 66.667 0.00 0.00 37.59 3.33
5311 5619 4.379243 CCTCCGGTGCTCGCTGTT 62.379 66.667 0.00 0.00 37.59 3.16
5313 5621 4.504916 CTCCTCCGGTGCTCGCTG 62.505 72.222 0.00 0.00 37.59 5.18
5314 5622 4.742649 TCTCCTCCGGTGCTCGCT 62.743 66.667 0.00 0.00 37.59 4.93
5315 5623 3.760035 TTCTCCTCCGGTGCTCGC 61.760 66.667 0.00 0.00 37.59 5.03
5316 5624 2.154798 TTGTTCTCCTCCGGTGCTCG 62.155 60.000 0.00 0.00 38.88 5.03
5317 5625 0.670854 GTTGTTCTCCTCCGGTGCTC 60.671 60.000 0.00 0.00 0.00 4.26
5318 5626 1.371558 GTTGTTCTCCTCCGGTGCT 59.628 57.895 0.00 0.00 0.00 4.40
5319 5627 2.027625 CGTTGTTCTCCTCCGGTGC 61.028 63.158 0.00 0.00 0.00 5.01
5320 5628 0.388649 CTCGTTGTTCTCCTCCGGTG 60.389 60.000 0.00 0.00 0.00 4.94
5321 5629 1.533469 CCTCGTTGTTCTCCTCCGGT 61.533 60.000 0.00 0.00 0.00 5.28
5322 5630 1.215647 CCTCGTTGTTCTCCTCCGG 59.784 63.158 0.00 0.00 0.00 5.14
5323 5631 0.601558 TTCCTCGTTGTTCTCCTCCG 59.398 55.000 0.00 0.00 0.00 4.63
5324 5632 1.673329 GCTTCCTCGTTGTTCTCCTCC 60.673 57.143 0.00 0.00 0.00 4.30
5325 5633 1.000955 TGCTTCCTCGTTGTTCTCCTC 59.999 52.381 0.00 0.00 0.00 3.71
5326 5634 1.001406 CTGCTTCCTCGTTGTTCTCCT 59.999 52.381 0.00 0.00 0.00 3.69
5327 5635 1.433534 CTGCTTCCTCGTTGTTCTCC 58.566 55.000 0.00 0.00 0.00 3.71
5328 5636 0.793250 GCTGCTTCCTCGTTGTTCTC 59.207 55.000 0.00 0.00 0.00 2.87
5329 5637 0.603975 GGCTGCTTCCTCGTTGTTCT 60.604 55.000 0.00 0.00 0.00 3.01
5330 5638 0.884704 TGGCTGCTTCCTCGTTGTTC 60.885 55.000 0.00 0.00 0.00 3.18
5331 5639 0.250901 ATGGCTGCTTCCTCGTTGTT 60.251 50.000 0.00 0.00 0.00 2.83
5332 5640 0.957395 CATGGCTGCTTCCTCGTTGT 60.957 55.000 0.00 0.00 0.00 3.32
5333 5641 0.957395 ACATGGCTGCTTCCTCGTTG 60.957 55.000 0.00 0.00 0.00 4.10
5334 5642 0.674895 GACATGGCTGCTTCCTCGTT 60.675 55.000 0.00 0.00 0.00 3.85
5335 5643 1.078848 GACATGGCTGCTTCCTCGT 60.079 57.895 0.00 0.00 0.00 4.18
5336 5644 1.088340 CAGACATGGCTGCTTCCTCG 61.088 60.000 17.42 0.00 0.00 4.63
5337 5645 0.035630 ACAGACATGGCTGCTTCCTC 60.036 55.000 28.95 0.00 39.51 3.71
5338 5646 0.403271 AACAGACATGGCTGCTTCCT 59.597 50.000 28.95 5.52 39.51 3.36
5339 5647 0.524862 CAACAGACATGGCTGCTTCC 59.475 55.000 28.95 0.00 39.51 3.46
5340 5648 1.527034 TCAACAGACATGGCTGCTTC 58.473 50.000 28.95 0.00 39.51 3.86
5341 5649 2.211250 ATCAACAGACATGGCTGCTT 57.789 45.000 28.95 18.07 39.51 3.91
5342 5650 1.816835 CAATCAACAGACATGGCTGCT 59.183 47.619 28.95 14.54 39.51 4.24
5343 5651 1.135199 CCAATCAACAGACATGGCTGC 60.135 52.381 28.95 0.00 39.51 5.25
5344 5652 2.094906 CACCAATCAACAGACATGGCTG 60.095 50.000 27.47 27.47 41.63 4.85
5345 5653 2.165167 CACCAATCAACAGACATGGCT 58.835 47.619 0.00 0.00 34.45 4.75
5346 5654 2.161855 TCACCAATCAACAGACATGGC 58.838 47.619 0.00 0.00 34.45 4.40
5347 5655 3.678289 TCTCACCAATCAACAGACATGG 58.322 45.455 0.00 0.00 37.19 3.66
5348 5656 3.688185 CCTCTCACCAATCAACAGACATG 59.312 47.826 0.00 0.00 0.00 3.21
5349 5657 3.307975 CCCTCTCACCAATCAACAGACAT 60.308 47.826 0.00 0.00 0.00 3.06
5350 5658 2.038952 CCCTCTCACCAATCAACAGACA 59.961 50.000 0.00 0.00 0.00 3.41
5351 5659 2.303022 TCCCTCTCACCAATCAACAGAC 59.697 50.000 0.00 0.00 0.00 3.51
5352 5660 2.303022 GTCCCTCTCACCAATCAACAGA 59.697 50.000 0.00 0.00 0.00 3.41
5353 5661 2.038952 TGTCCCTCTCACCAATCAACAG 59.961 50.000 0.00 0.00 0.00 3.16
5354 5662 2.054021 TGTCCCTCTCACCAATCAACA 58.946 47.619 0.00 0.00 0.00 3.33
5355 5663 2.859165 TGTCCCTCTCACCAATCAAC 57.141 50.000 0.00 0.00 0.00 3.18
5356 5664 2.040278 CCTTGTCCCTCTCACCAATCAA 59.960 50.000 0.00 0.00 0.00 2.57
5357 5665 1.630369 CCTTGTCCCTCTCACCAATCA 59.370 52.381 0.00 0.00 0.00 2.57
5358 5666 1.065126 CCCTTGTCCCTCTCACCAATC 60.065 57.143 0.00 0.00 0.00 2.67
5359 5667 0.995024 CCCTTGTCCCTCTCACCAAT 59.005 55.000 0.00 0.00 0.00 3.16
5360 5668 1.779061 GCCCTTGTCCCTCTCACCAA 61.779 60.000 0.00 0.00 0.00 3.67
5361 5669 2.224159 GCCCTTGTCCCTCTCACCA 61.224 63.158 0.00 0.00 0.00 4.17
5362 5670 2.671682 GCCCTTGTCCCTCTCACC 59.328 66.667 0.00 0.00 0.00 4.02
5363 5671 1.617947 ATCGCCCTTGTCCCTCTCAC 61.618 60.000 0.00 0.00 0.00 3.51
5364 5672 1.306141 ATCGCCCTTGTCCCTCTCA 60.306 57.895 0.00 0.00 0.00 3.27
5365 5673 1.144936 CATCGCCCTTGTCCCTCTC 59.855 63.158 0.00 0.00 0.00 3.20
5366 5674 2.370445 CCATCGCCCTTGTCCCTCT 61.370 63.158 0.00 0.00 0.00 3.69
5367 5675 2.190578 CCATCGCCCTTGTCCCTC 59.809 66.667 0.00 0.00 0.00 4.30
5368 5676 2.610859 ACCATCGCCCTTGTCCCT 60.611 61.111 0.00 0.00 0.00 4.20
5369 5677 2.438434 CACCATCGCCCTTGTCCC 60.438 66.667 0.00 0.00 0.00 4.46
5370 5678 1.745489 GTCACCATCGCCCTTGTCC 60.745 63.158 0.00 0.00 0.00 4.02
5371 5679 0.392998 ATGTCACCATCGCCCTTGTC 60.393 55.000 0.00 0.00 0.00 3.18
5372 5680 0.908910 TATGTCACCATCGCCCTTGT 59.091 50.000 0.00 0.00 32.29 3.16
5373 5681 1.134401 ACTATGTCACCATCGCCCTTG 60.134 52.381 0.00 0.00 32.29 3.61
5374 5682 1.134401 CACTATGTCACCATCGCCCTT 60.134 52.381 0.00 0.00 32.29 3.95
5375 5683 0.465705 CACTATGTCACCATCGCCCT 59.534 55.000 0.00 0.00 32.29 5.19
5376 5684 0.464036 TCACTATGTCACCATCGCCC 59.536 55.000 0.00 0.00 32.29 6.13
5377 5685 2.159099 TCTTCACTATGTCACCATCGCC 60.159 50.000 0.00 0.00 32.29 5.54
5378 5686 3.165058 TCTTCACTATGTCACCATCGC 57.835 47.619 0.00 0.00 32.29 4.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.