Multiple sequence alignment - TraesCS5D01G258400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G258400 chr5D 100.000 6436 0 0 1 6436 364768320 364761885 0.000000e+00 11886.0
1 TraesCS5D01G258400 chr5D 89.662 1896 146 30 1700 3577 364665244 364667107 0.000000e+00 2370.0
2 TraesCS5D01G258400 chr5D 86.992 1476 122 35 136 1568 364663280 364664728 0.000000e+00 1598.0
3 TraesCS5D01G258400 chr5D 86.013 765 63 16 4226 4949 364667780 364668541 0.000000e+00 780.0
4 TraesCS5D01G258400 chr5D 83.755 831 106 20 698 1503 364559724 364560550 0.000000e+00 760.0
5 TraesCS5D01G258400 chr5D 83.373 830 105 23 698 1503 364551184 364552004 0.000000e+00 737.0
6 TraesCS5D01G258400 chr5D 82.551 831 113 18 698 1503 364563100 364563923 0.000000e+00 702.0
7 TraesCS5D01G258400 chr5D 81.039 828 119 25 698 1503 364548787 364549598 5.480000e-175 625.0
8 TraesCS5D01G258400 chr5D 82.282 745 104 17 746 1477 364589110 364589839 2.550000e-173 619.0
9 TraesCS5D01G258400 chr5D 86.964 560 51 11 3579 4137 364667250 364667788 1.530000e-170 610.0
10 TraesCS5D01G258400 chr5D 86.239 545 58 8 4532 5060 30615835 30615292 5.600000e-160 575.0
11 TraesCS5D01G258400 chr5D 80.244 739 99 27 1 705 364550162 364550887 4.450000e-141 512.0
12 TraesCS5D01G258400 chr5D 80.197 712 103 19 25 705 364555685 364556389 3.460000e-137 499.0
13 TraesCS5D01G258400 chr5D 83.688 423 47 16 3046 3454 30673524 30673110 4.710000e-101 379.0
14 TraesCS5D01G258400 chr5D 87.113 194 20 2 2798 2986 30673727 30673534 1.410000e-51 215.0
15 TraesCS5D01G258400 chr5D 96.875 96 3 0 4133 4228 181922896 181922801 1.860000e-35 161.0
16 TraesCS5D01G258400 chr5D 93.396 106 6 1 4133 4237 335112266 335112371 8.640000e-34 156.0
17 TraesCS5D01G258400 chr5D 91.892 111 7 2 4133 4242 276797313 276797204 3.110000e-33 154.0
18 TraesCS5D01G258400 chr5A 97.626 1938 44 2 2201 4137 466038899 466036963 0.000000e+00 3323.0
19 TraesCS5D01G258400 chr5A 88.328 1645 109 40 60 1641 466041754 466040130 0.000000e+00 1897.0
20 TraesCS5D01G258400 chr5A 95.061 1073 41 6 4226 5293 466036971 466035906 0.000000e+00 1677.0
21 TraesCS5D01G258400 chr5A 90.508 1043 80 12 2543 3577 465992089 465993120 0.000000e+00 1360.0
22 TraesCS5D01G258400 chr5A 87.378 1022 87 21 4294 5284 465993902 465994912 0.000000e+00 1134.0
23 TraesCS5D01G258400 chr5A 85.377 1101 108 29 500 1568 465987726 465988805 0.000000e+00 1092.0
24 TraesCS5D01G258400 chr5A 85.537 968 78 28 1598 2544 465991059 465991985 0.000000e+00 955.0
25 TraesCS5D01G258400 chr5A 86.940 781 55 23 1697 2467 466039740 466038997 0.000000e+00 833.0
26 TraesCS5D01G258400 chr5A 89.680 562 46 7 3579 4137 465993263 465993815 0.000000e+00 706.0
27 TraesCS5D01G258400 chr5A 80.297 741 104 27 1 705 465647651 465648385 7.390000e-144 521.0
28 TraesCS5D01G258400 chr5A 80.645 713 97 24 27 705 465644670 465645375 1.240000e-141 514.0
29 TraesCS5D01G258400 chr5A 90.159 315 20 4 5286 5598 466035883 466035578 3.620000e-107 399.0
30 TraesCS5D01G258400 chr5A 86.667 120 14 2 587 705 465642853 465642971 1.460000e-26 132.0
31 TraesCS5D01G258400 chr5B 90.317 2520 156 47 3 2461 430754925 430752433 0.000000e+00 3221.0
32 TraesCS5D01G258400 chr5B 96.435 1599 46 3 2540 4137 430752338 430750750 0.000000e+00 2627.0
33 TraesCS5D01G258400 chr5B 92.352 1556 75 11 4226 5753 430750758 430749219 0.000000e+00 2174.0
34 TraesCS5D01G258400 chr5B 90.691 1042 78 8 2544 3577 430670621 430671651 0.000000e+00 1369.0
35 TraesCS5D01G258400 chr5B 85.867 1026 107 25 4294 5284 430672446 430673468 0.000000e+00 1057.0
36 TraesCS5D01G258400 chr5B 85.965 969 63 26 1598 2536 430669647 430670572 0.000000e+00 968.0
37 TraesCS5D01G258400 chr5B 86.386 830 76 20 755 1568 430668373 430669181 0.000000e+00 872.0
38 TraesCS5D01G258400 chr5B 82.005 828 119 20 698 1502 430625628 430626448 0.000000e+00 676.0
39 TraesCS5D01G258400 chr5B 87.847 576 43 15 3579 4137 430671794 430672359 0.000000e+00 651.0
40 TraesCS5D01G258400 chr5B 81.140 737 102 19 1 705 430618388 430619119 2.030000e-154 556.0
41 TraesCS5D01G258400 chr5B 81.440 722 92 26 19 705 430632115 430632829 2.620000e-153 553.0
42 TraesCS5D01G258400 chr5B 80.926 734 102 21 1 701 430621615 430622343 4.390000e-151 545.0
43 TraesCS5D01G258400 chr5B 83.831 569 77 14 698 1254 430619650 430620215 1.590000e-145 527.0
44 TraesCS5D01G258400 chr5B 80.584 582 88 17 1 571 430624206 430624773 5.960000e-115 425.0
45 TraesCS5D01G258400 chr5B 89.167 120 12 1 587 705 430625213 430625332 1.450000e-31 148.0
46 TraesCS5D01G258400 chr5B 86.667 120 9 4 5983 6096 430748741 430748623 6.770000e-25 126.0
47 TraesCS5D01G258400 chr1A 86.607 224 11 3 1667 1889 439339868 439339663 5.020000e-56 230.0
48 TraesCS5D01G258400 chr1A 77.500 160 30 6 6272 6429 392041314 392041469 2.470000e-14 91.6
49 TraesCS5D01G258400 chr4A 80.836 287 50 4 6153 6436 514437299 514437583 3.020000e-53 220.0
50 TraesCS5D01G258400 chr3A 85.057 174 26 0 6263 6436 380951147 380950974 1.840000e-40 178.0
51 TraesCS5D01G258400 chr1D 96.939 98 3 0 4133 4230 368254890 368254793 1.440000e-36 165.0
52 TraesCS5D01G258400 chr7D 96.875 96 3 0 4133 4228 478948812 478948717 1.860000e-35 161.0
53 TraesCS5D01G258400 chr4D 95.960 99 4 0 4133 4231 380265560 380265462 1.860000e-35 161.0
54 TraesCS5D01G258400 chr4D 96.000 100 3 1 4133 4231 466720705 466720606 1.860000e-35 161.0
55 TraesCS5D01G258400 chr4D 86.905 84 7 4 6270 6352 72796869 72796789 2.470000e-14 91.6
56 TraesCS5D01G258400 chr6A 95.918 98 4 0 4133 4230 400328802 400328899 6.680000e-35 159.0
57 TraesCS5D01G258400 chr7B 92.593 108 7 1 4133 4239 328855555 328855448 3.110000e-33 154.0
58 TraesCS5D01G258400 chr4B 79.070 172 29 6 6185 6352 105954796 105954628 1.900000e-20 111.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G258400 chr5D 364761885 364768320 6435 True 11886.000000 11886 100.000000 1 6436 1 chr5D.!!$R4 6435
1 TraesCS5D01G258400 chr5D 364663280 364668541 5261 False 1339.500000 2370 87.407750 136 4949 4 chr5D.!!$F4 4813
2 TraesCS5D01G258400 chr5D 364548787 364563923 15136 False 639.166667 760 81.859833 1 1503 6 chr5D.!!$F3 1502
3 TraesCS5D01G258400 chr5D 364589110 364589839 729 False 619.000000 619 82.282000 746 1477 1 chr5D.!!$F2 731
4 TraesCS5D01G258400 chr5D 30615292 30615835 543 True 575.000000 575 86.239000 4532 5060 1 chr5D.!!$R1 528
5 TraesCS5D01G258400 chr5D 30673110 30673727 617 True 297.000000 379 85.400500 2798 3454 2 chr5D.!!$R5 656
6 TraesCS5D01G258400 chr5A 466035578 466041754 6176 True 1625.800000 3323 91.622800 60 5598 5 chr5A.!!$R1 5538
7 TraesCS5D01G258400 chr5A 465987726 465994912 7186 False 1049.400000 1360 87.696000 500 5284 5 chr5A.!!$F2 4784
8 TraesCS5D01G258400 chr5A 465642853 465648385 5532 False 389.000000 521 82.536333 1 705 3 chr5A.!!$F1 704
9 TraesCS5D01G258400 chr5B 430748623 430754925 6302 True 2037.000000 3221 91.442750 3 6096 4 chr5B.!!$R1 6093
10 TraesCS5D01G258400 chr5B 430668373 430673468 5095 False 983.400000 1369 87.351200 755 5284 5 chr5B.!!$F3 4529
11 TraesCS5D01G258400 chr5B 430632115 430632829 714 False 553.000000 553 81.440000 19 705 1 chr5B.!!$F1 686
12 TraesCS5D01G258400 chr5B 430618388 430626448 8060 False 479.500000 676 82.942167 1 1502 6 chr5B.!!$F2 1501

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
149 4606 0.524816 CTGCCGTCATCATGCTTTGC 60.525 55.000 0.00 0.00 0.00 3.68 F
1666 23940 1.379044 CATCCCCACAGCCCACTTC 60.379 63.158 0.00 0.00 0.00 3.01 F
2067 24675 1.130955 GGCAATGTTCTTTGTGCACG 58.869 50.000 13.13 0.00 38.78 5.34 F
2073 24681 1.890041 TTCTTTGTGCACGACGGGG 60.890 57.895 13.13 1.09 0.00 5.73 F
2361 25326 1.902508 AGTGTCTGTCATCCGTTGGAT 59.097 47.619 0.00 0.00 44.21 3.41 F
4150 28517 1.239347 GACCCACTCAGTTTCAAGGC 58.761 55.000 0.00 0.00 0.00 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1797 24386 0.030908 CTACCGAATCGAGCCCAGAC 59.969 60.000 3.36 0.0 0.00 3.51 R
3603 27953 4.499696 GCAGAGGTTGTGTGCTTAATTGTT 60.500 41.667 0.00 0.0 42.31 2.83 R
3690 28047 7.255569 TCTACATAGTTGGAAGTCGTACATTG 58.744 38.462 0.00 0.0 0.00 2.82 R
3861 28225 9.613428 TGTACTCCCATTAGATTTTCAGTTATG 57.387 33.333 0.00 0.0 0.00 1.90 R
4152 28519 0.178987 ACCCCAAATTGCACGTACCA 60.179 50.000 0.00 0.0 0.00 3.25 R
5773 30253 0.037697 CCGTCGAGACAACATCCCAA 60.038 55.000 4.02 0.0 0.00 4.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 4505 2.068837 CAAGCATTGCGAACCATGTT 57.931 45.000 2.38 0.00 40.39 2.71
102 4559 5.847304 TCTGCGCAGTTAATATGAGAAGAT 58.153 37.500 34.70 0.00 28.30 2.40
105 4562 6.226052 TGCGCAGTTAATATGAGAAGATGAT 58.774 36.000 5.66 0.00 0.00 2.45
106 4563 6.146673 TGCGCAGTTAATATGAGAAGATGATG 59.853 38.462 5.66 0.00 0.00 3.07
107 4564 6.532311 CGCAGTTAATATGAGAAGATGATGC 58.468 40.000 0.00 0.00 0.00 3.91
109 4566 7.307573 CGCAGTTAATATGAGAAGATGATGCAA 60.308 37.037 0.00 0.00 0.00 4.08
149 4606 0.524816 CTGCCGTCATCATGCTTTGC 60.525 55.000 0.00 0.00 0.00 3.68
168 7051 2.224843 TGCAGTGAAGGATGGTCATGTT 60.225 45.455 0.00 0.00 0.00 2.71
169 7052 2.163010 GCAGTGAAGGATGGTCATGTTG 59.837 50.000 0.00 0.00 0.00 3.33
171 7054 4.578871 CAGTGAAGGATGGTCATGTTGTA 58.421 43.478 0.00 0.00 0.00 2.41
172 7055 4.393062 CAGTGAAGGATGGTCATGTTGTAC 59.607 45.833 0.00 0.00 0.00 2.90
173 7056 4.287067 AGTGAAGGATGGTCATGTTGTACT 59.713 41.667 0.00 0.00 0.00 2.73
317 7208 2.227194 CACTTTTAGGCCAACCGAACT 58.773 47.619 5.01 0.00 42.76 3.01
338 7229 2.257409 GACCACCTCCGATGGCATGT 62.257 60.000 3.81 0.00 41.31 3.21
399 7292 2.807107 TTCCATCGGCGATGAGGGG 61.807 63.158 42.19 29.11 42.09 4.79
497 7392 4.575885 TGCCAATCAAACACTACTACCTC 58.424 43.478 0.00 0.00 0.00 3.85
630 7549 6.325545 TGGGTACATATGAGTTCCTTCGTTAT 59.674 38.462 10.38 0.00 0.00 1.89
679 7598 1.542108 GCCTCTTTGTGTCTCACAGCT 60.542 52.381 2.93 0.00 45.39 4.24
744 8222 6.094325 TCGTCATTCAATTACATTGTTACCCC 59.906 38.462 0.00 0.00 41.02 4.95
803 11323 1.677820 GGGTACCGCACAAACTAGCAT 60.678 52.381 5.65 0.00 40.86 3.79
851 11371 1.503800 CCCCCACCGTAAATAGACCT 58.496 55.000 0.00 0.00 0.00 3.85
927 14825 2.990479 GACCCCGTCCTGCATCTT 59.010 61.111 0.00 0.00 0.00 2.40
938 14836 2.376518 TCCTGCATCTTTCCCAGTTCTT 59.623 45.455 0.00 0.00 0.00 2.52
939 14837 2.751806 CCTGCATCTTTCCCAGTTCTTC 59.248 50.000 0.00 0.00 0.00 2.87
940 14838 3.560882 CCTGCATCTTTCCCAGTTCTTCT 60.561 47.826 0.00 0.00 0.00 2.85
1074 20952 4.129148 GCCGCCCTTCCCCTTCAT 62.129 66.667 0.00 0.00 0.00 2.57
1158 21036 3.036429 GCCACGGAGGAGCAAGGAT 62.036 63.158 0.00 0.00 41.22 3.24
1211 21099 5.163754 CCGATTCCATCAGGTAGTGTTTTTC 60.164 44.000 0.00 0.00 35.89 2.29
1294 21182 3.935203 TCCGAATGTTGAGATTTCTGCTC 59.065 43.478 0.00 0.00 0.00 4.26
1304 21192 5.765176 TGAGATTTCTGCTCAATGTTTGTG 58.235 37.500 0.00 0.00 39.29 3.33
1444 21356 8.908172 AACAAATTGCCAATTAAACAAAACAG 57.092 26.923 2.54 0.00 0.00 3.16
1493 21412 4.007659 CCCCGCTGTCACTTTACTATTTT 58.992 43.478 0.00 0.00 0.00 1.82
1494 21413 5.180271 CCCCGCTGTCACTTTACTATTTTA 58.820 41.667 0.00 0.00 0.00 1.52
1495 21414 5.820947 CCCCGCTGTCACTTTACTATTTTAT 59.179 40.000 0.00 0.00 0.00 1.40
1571 21579 2.726822 AAGAAACGCGACCTCACCCC 62.727 60.000 15.93 0.00 0.00 4.95
1632 23880 2.104792 CAGTTGACTCCCAGACTTTCCA 59.895 50.000 0.00 0.00 0.00 3.53
1641 23889 1.912043 CCAGACTTTCCATCACTCCCT 59.088 52.381 0.00 0.00 0.00 4.20
1657 23905 3.016971 CTCCTGGCCATCCCCACA 61.017 66.667 5.51 0.00 0.00 4.17
1664 23938 3.341629 CCATCCCCACAGCCCACT 61.342 66.667 0.00 0.00 0.00 4.00
1665 23939 2.765969 CATCCCCACAGCCCACTT 59.234 61.111 0.00 0.00 0.00 3.16
1666 23940 1.379044 CATCCCCACAGCCCACTTC 60.379 63.158 0.00 0.00 0.00 3.01
1667 23941 2.971598 ATCCCCACAGCCCACTTCG 61.972 63.158 0.00 0.00 0.00 3.79
1670 23944 4.335647 CCACAGCCCACTTCGCCT 62.336 66.667 0.00 0.00 0.00 5.52
1671 23945 2.743928 CACAGCCCACTTCGCCTC 60.744 66.667 0.00 0.00 0.00 4.70
1672 23946 4.021925 ACAGCCCACTTCGCCTCC 62.022 66.667 0.00 0.00 0.00 4.30
1673 23947 4.785453 CAGCCCACTTCGCCTCCC 62.785 72.222 0.00 0.00 0.00 4.30
1676 23950 4.101448 CCCACTTCGCCTCCCCTG 62.101 72.222 0.00 0.00 0.00 4.45
1677 23951 4.785453 CCACTTCGCCTCCCCTGC 62.785 72.222 0.00 0.00 0.00 4.85
1678 23952 4.785453 CACTTCGCCTCCCCTGCC 62.785 72.222 0.00 0.00 0.00 4.85
1774 24363 2.036098 TTCTCCCCCGTCGCACTA 59.964 61.111 0.00 0.00 0.00 2.74
1778 24367 3.834799 CCCCCGTCGCACTAGACC 61.835 72.222 0.00 0.00 37.85 3.85
1800 24389 2.847234 TGGAGTTGGCACCCGTCT 60.847 61.111 0.00 0.00 0.00 4.18
1857 24448 3.479269 CGGCTCGCGTTCTGTTCC 61.479 66.667 5.77 0.00 0.00 3.62
1858 24449 2.048127 GGCTCGCGTTCTGTTCCT 60.048 61.111 5.77 0.00 0.00 3.36
1934 24536 1.674057 CGGCTGACCTTCCAAGAGT 59.326 57.895 0.00 0.00 0.00 3.24
2067 24675 1.130955 GGCAATGTTCTTTGTGCACG 58.869 50.000 13.13 0.00 38.78 5.34
2073 24681 1.890041 TTCTTTGTGCACGACGGGG 60.890 57.895 13.13 1.09 0.00 5.73
2074 24682 3.353836 CTTTGTGCACGACGGGGG 61.354 66.667 13.13 0.00 0.00 5.40
2133 24746 3.374220 TGCTTTTTCCACTTCAGCATG 57.626 42.857 0.00 0.00 35.56 4.06
2260 25220 8.348285 ACAATTGTACATAAAACCTATGCTGT 57.652 30.769 9.97 0.00 0.00 4.40
2261 25221 8.243426 ACAATTGTACATAAAACCTATGCTGTG 58.757 33.333 9.97 0.00 0.00 3.66
2352 25317 4.037565 TCAGTTGTAACGAGTGTCTGTCAT 59.962 41.667 0.00 0.00 0.00 3.06
2361 25326 1.902508 AGTGTCTGTCATCCGTTGGAT 59.097 47.619 0.00 0.00 44.21 3.41
2728 26900 9.162764 GTGCCATACTACTTCTTTTATGAGAAA 57.837 33.333 0.00 0.00 35.38 2.52
2883 27056 8.103305 TGCCACCTCTATTCCATCTAATATTTC 58.897 37.037 0.00 0.00 0.00 2.17
3068 27246 3.006323 CCTTGACAGAGCACAGTTACTCT 59.994 47.826 0.00 0.00 44.06 3.24
3110 27292 3.561310 TCTGCTTGTTGTTGCTGTAAGAG 59.439 43.478 0.00 0.00 34.07 2.85
3124 27306 5.587443 TGCTGTAAGAGATCATGAAACATGG 59.413 40.000 0.00 0.00 34.07 3.66
3267 27463 3.306156 GCTTCTGACGGAGGTACTTCTTT 60.306 47.826 4.85 0.00 41.55 2.52
3292 27488 6.561614 AGTCTTCAGCTTCATGCATTAAATG 58.438 36.000 0.00 0.00 45.94 2.32
3396 27598 8.942338 ATTTTCGTCTGATATTGTAGCAGTTA 57.058 30.769 2.63 0.00 42.52 2.24
3603 27953 2.224378 CCTTGTGAGAACAGAGCTCCAA 60.224 50.000 10.93 3.89 0.00 3.53
3861 28225 3.827008 TCACAAGTCAGCCAGATATCC 57.173 47.619 0.00 0.00 0.00 2.59
4138 28505 7.805163 TCAATCTATATTGACAATGACCCACT 58.195 34.615 11.05 0.00 45.17 4.00
4139 28506 7.933577 TCAATCTATATTGACAATGACCCACTC 59.066 37.037 11.05 0.00 45.17 3.51
4140 28507 6.806668 TCTATATTGACAATGACCCACTCA 57.193 37.500 11.05 0.00 0.00 3.41
4141 28508 6.820335 TCTATATTGACAATGACCCACTCAG 58.180 40.000 11.05 0.00 30.20 3.35
4142 28509 3.795688 ATTGACAATGACCCACTCAGT 57.204 42.857 0.00 0.00 30.20 3.41
4143 28510 3.576078 TTGACAATGACCCACTCAGTT 57.424 42.857 0.00 0.00 30.20 3.16
4144 28511 3.576078 TGACAATGACCCACTCAGTTT 57.424 42.857 0.00 0.00 30.20 2.66
4145 28512 3.476552 TGACAATGACCCACTCAGTTTC 58.523 45.455 0.00 0.00 30.20 2.78
4146 28513 3.118075 TGACAATGACCCACTCAGTTTCA 60.118 43.478 0.00 0.00 32.58 2.69
4147 28514 3.882888 GACAATGACCCACTCAGTTTCAA 59.117 43.478 0.00 0.00 30.20 2.69
4148 28515 3.885297 ACAATGACCCACTCAGTTTCAAG 59.115 43.478 0.00 0.00 30.20 3.02
4149 28516 2.638480 TGACCCACTCAGTTTCAAGG 57.362 50.000 0.00 0.00 0.00 3.61
4150 28517 1.239347 GACCCACTCAGTTTCAAGGC 58.761 55.000 0.00 0.00 0.00 4.35
4151 28518 0.550914 ACCCACTCAGTTTCAAGGCA 59.449 50.000 0.00 0.00 0.00 4.75
4152 28519 1.145738 ACCCACTCAGTTTCAAGGCAT 59.854 47.619 0.00 0.00 0.00 4.40
4153 28520 1.542915 CCCACTCAGTTTCAAGGCATG 59.457 52.381 0.00 0.00 0.00 4.06
4154 28521 1.542915 CCACTCAGTTTCAAGGCATGG 59.457 52.381 0.00 0.00 0.00 3.66
4155 28522 2.233271 CACTCAGTTTCAAGGCATGGT 58.767 47.619 0.00 0.00 0.00 3.55
4156 28523 3.411446 CACTCAGTTTCAAGGCATGGTA 58.589 45.455 0.00 0.00 0.00 3.25
4157 28524 3.189287 CACTCAGTTTCAAGGCATGGTAC 59.811 47.826 0.00 0.00 0.00 3.34
4158 28525 2.416547 CTCAGTTTCAAGGCATGGTACG 59.583 50.000 0.00 0.00 0.00 3.67
4159 28526 2.151202 CAGTTTCAAGGCATGGTACGT 58.849 47.619 0.00 0.00 0.00 3.57
4160 28527 2.095768 CAGTTTCAAGGCATGGTACGTG 60.096 50.000 0.00 0.00 0.00 4.49
4161 28528 0.878416 TTTCAAGGCATGGTACGTGC 59.122 50.000 12.06 12.06 41.78 5.34
4162 28529 0.250510 TTCAAGGCATGGTACGTGCA 60.251 50.000 19.45 0.00 44.25 4.57
4163 28530 0.250510 TCAAGGCATGGTACGTGCAA 60.251 50.000 19.45 0.00 44.25 4.08
4164 28531 0.810648 CAAGGCATGGTACGTGCAAT 59.189 50.000 19.45 0.00 44.25 3.56
4165 28532 1.202114 CAAGGCATGGTACGTGCAATT 59.798 47.619 19.45 12.42 44.25 2.32
4166 28533 1.544724 AGGCATGGTACGTGCAATTT 58.455 45.000 19.45 3.90 44.25 1.82
4167 28534 1.202114 AGGCATGGTACGTGCAATTTG 59.798 47.619 19.45 0.00 44.25 2.32
4168 28535 1.627879 GCATGGTACGTGCAATTTGG 58.372 50.000 14.74 0.00 42.08 3.28
4169 28536 1.735369 GCATGGTACGTGCAATTTGGG 60.735 52.381 14.74 0.00 42.08 4.12
4170 28537 1.135141 CATGGTACGTGCAATTTGGGG 60.135 52.381 5.86 0.00 0.00 4.96
4171 28538 0.178987 TGGTACGTGCAATTTGGGGT 60.179 50.000 5.86 0.00 0.00 4.95
4172 28539 0.963225 GGTACGTGCAATTTGGGGTT 59.037 50.000 5.86 0.00 0.00 4.11
4173 28540 1.336424 GGTACGTGCAATTTGGGGTTG 60.336 52.381 5.86 0.00 0.00 3.77
4174 28541 1.338655 GTACGTGCAATTTGGGGTTGT 59.661 47.619 0.00 0.00 0.00 3.32
4175 28542 0.827368 ACGTGCAATTTGGGGTTGTT 59.173 45.000 0.00 0.00 0.00 2.83
4176 28543 1.216122 CGTGCAATTTGGGGTTGTTG 58.784 50.000 0.00 0.00 0.00 3.33
4177 28544 0.943673 GTGCAATTTGGGGTTGTTGC 59.056 50.000 0.00 2.25 45.27 4.17
4178 28545 3.393472 GCAATTTGGGGTTGTTGCA 57.607 47.368 4.26 0.00 44.63 4.08
4179 28546 0.943673 GCAATTTGGGGTTGTTGCAC 59.056 50.000 4.26 0.00 44.63 4.57
4180 28547 1.592064 CAATTTGGGGTTGTTGCACC 58.408 50.000 0.00 0.00 35.88 5.01
4181 28548 1.134280 CAATTTGGGGTTGTTGCACCA 60.134 47.619 0.00 0.00 40.77 4.17
4183 28550 2.922162 TTGGGGTTGTTGCACCAAT 58.078 47.368 0.00 0.00 46.07 3.16
4184 28551 1.207791 TTGGGGTTGTTGCACCAATT 58.792 45.000 0.00 0.00 46.07 2.32
4185 28552 2.088104 TGGGGTTGTTGCACCAATTA 57.912 45.000 0.00 0.00 39.32 1.40
4186 28553 2.614259 TGGGGTTGTTGCACCAATTAT 58.386 42.857 0.00 0.00 39.32 1.28
4187 28554 3.779444 TGGGGTTGTTGCACCAATTATA 58.221 40.909 0.00 0.00 39.32 0.98
4188 28555 3.511934 TGGGGTTGTTGCACCAATTATAC 59.488 43.478 0.00 0.00 39.32 1.47
4189 28556 3.767131 GGGGTTGTTGCACCAATTATACT 59.233 43.478 0.00 0.00 38.79 2.12
4190 28557 4.381505 GGGGTTGTTGCACCAATTATACTG 60.382 45.833 0.00 0.00 38.79 2.74
4191 28558 4.219725 GGGTTGTTGCACCAATTATACTGT 59.780 41.667 0.00 0.00 38.79 3.55
4192 28559 5.416326 GGGTTGTTGCACCAATTATACTGTA 59.584 40.000 0.00 0.00 38.79 2.74
4193 28560 6.404293 GGGTTGTTGCACCAATTATACTGTAG 60.404 42.308 0.00 0.00 38.79 2.74
4194 28561 6.404293 GGTTGTTGCACCAATTATACTGTAGG 60.404 42.308 0.00 0.00 36.73 3.18
4195 28562 5.189928 TGTTGCACCAATTATACTGTAGGG 58.810 41.667 0.00 0.00 0.00 3.53
4196 28563 4.431416 TGCACCAATTATACTGTAGGGG 57.569 45.455 0.00 0.00 0.00 4.79
4197 28564 3.137544 TGCACCAATTATACTGTAGGGGG 59.862 47.826 0.00 0.00 0.00 5.40
4198 28565 3.137728 GCACCAATTATACTGTAGGGGGT 59.862 47.826 0.00 0.00 0.00 4.95
4199 28566 4.385977 GCACCAATTATACTGTAGGGGGTT 60.386 45.833 0.00 0.00 0.00 4.11
4200 28567 5.374071 CACCAATTATACTGTAGGGGGTTC 58.626 45.833 0.00 0.00 0.00 3.62
4201 28568 4.414514 ACCAATTATACTGTAGGGGGTTCC 59.585 45.833 0.00 0.00 0.00 3.62
4214 28581 3.069079 GGGGTTCCCTTACAGTCTTTC 57.931 52.381 7.87 0.00 41.34 2.62
4215 28582 2.643304 GGGGTTCCCTTACAGTCTTTCT 59.357 50.000 7.87 0.00 41.34 2.52
4216 28583 3.559384 GGGGTTCCCTTACAGTCTTTCTG 60.559 52.174 7.87 0.00 44.11 3.02
4218 28585 7.771544 GGGGTTCCCTTACAGTCTTTCTGTC 62.772 52.000 7.87 0.00 46.24 3.51
4434 28834 4.834496 TCACATTTTTCTCAGCCATTTCCT 59.166 37.500 0.00 0.00 0.00 3.36
4883 29302 1.250154 TTAGGTGGCCATGCACAAGC 61.250 55.000 9.72 0.00 42.57 4.01
5194 29630 0.104855 TCCGTCCAGCAGATGTATGC 59.895 55.000 0.00 0.00 46.88 3.14
5216 29652 3.018856 AGGCGATGCTTGATTCATTTCA 58.981 40.909 0.00 0.00 0.00 2.69
5240 29676 1.523758 ACCGGTTTCAGCATCTGTTC 58.476 50.000 0.00 0.00 32.61 3.18
5401 29871 6.460399 GGTTGCTGAGTATTTGTGGTAAAACA 60.460 38.462 0.00 0.00 0.00 2.83
5402 29872 6.892658 TGCTGAGTATTTGTGGTAAAACAT 57.107 33.333 0.00 0.00 0.00 2.71
5403 29873 7.283625 TGCTGAGTATTTGTGGTAAAACATT 57.716 32.000 0.00 0.00 0.00 2.71
5404 29874 8.397575 TGCTGAGTATTTGTGGTAAAACATTA 57.602 30.769 0.00 0.00 0.00 1.90
5405 29875 8.851145 TGCTGAGTATTTGTGGTAAAACATTAA 58.149 29.630 0.00 0.00 0.00 1.40
5406 29876 9.124807 GCTGAGTATTTGTGGTAAAACATTAAC 57.875 33.333 0.00 0.00 0.00 2.01
5407 29877 9.325150 CTGAGTATTTGTGGTAAAACATTAACG 57.675 33.333 0.00 0.00 0.00 3.18
5408 29878 8.291032 TGAGTATTTGTGGTAAAACATTAACGG 58.709 33.333 0.00 0.00 0.00 4.44
5422 29892 2.772077 TAACGGATTAACCAGCTGCA 57.228 45.000 8.66 0.00 38.90 4.41
5487 29958 0.033208 TACCGTGTTATCCCTCGGGT 60.033 55.000 1.18 0.00 46.06 5.28
5492 29963 2.364579 TTATCCCTCGGGTGGCGT 60.365 61.111 1.18 0.00 36.47 5.68
5598 30069 2.103432 TGGTCGTTTTCTCCAACTAGCA 59.897 45.455 0.00 0.00 30.04 3.49
5619 30090 1.808945 CGATGCATATGGGGAAGCTTC 59.191 52.381 18.54 18.54 0.00 3.86
5620 30091 1.808945 GATGCATATGGGGAAGCTTCG 59.191 52.381 19.91 5.69 0.00 3.79
5624 30095 0.179018 ATATGGGGAAGCTTCGGTGC 60.179 55.000 19.91 6.15 0.00 5.01
5639 30110 3.872603 TGCGGTGGCCTGAGTTGT 61.873 61.111 3.32 0.00 38.85 3.32
5643 30114 1.148273 GGTGGCCTGAGTTGTGACA 59.852 57.895 3.32 0.00 0.00 3.58
5645 30116 1.148273 TGGCCTGAGTTGTGACACC 59.852 57.895 3.32 0.00 0.00 4.16
5647 30118 1.961277 GCCTGAGTTGTGACACCCG 60.961 63.158 2.45 0.00 0.00 5.28
5649 30120 0.321671 CCTGAGTTGTGACACCCGAT 59.678 55.000 2.45 0.00 0.00 4.18
5680 30151 2.751837 GGTGCACCTTAGGGCTGC 60.752 66.667 29.12 4.98 38.87 5.25
5686 30157 1.918800 ACCTTAGGGCTGCGTCCTT 60.919 57.895 2.32 0.00 39.09 3.36
5737 30208 2.358737 GGTTGTGCTCCGACCAGG 60.359 66.667 8.11 0.00 45.85 4.45
5772 30252 3.245158 CCATATCTGATGATGGGGTGCTT 60.245 47.826 13.76 0.00 39.23 3.91
5773 30253 4.404640 CATATCTGATGATGGGGTGCTTT 58.595 43.478 0.00 0.00 34.32 3.51
5775 30255 2.449464 TCTGATGATGGGGTGCTTTTG 58.551 47.619 0.00 0.00 0.00 2.44
5777 30257 0.826062 GATGATGGGGTGCTTTTGGG 59.174 55.000 0.00 0.00 0.00 4.12
5778 30258 0.413037 ATGATGGGGTGCTTTTGGGA 59.587 50.000 0.00 0.00 0.00 4.37
5779 30259 0.413037 TGATGGGGTGCTTTTGGGAT 59.587 50.000 0.00 0.00 0.00 3.85
5780 30260 0.826062 GATGGGGTGCTTTTGGGATG 59.174 55.000 0.00 0.00 0.00 3.51
5782 30262 0.105246 TGGGGTGCTTTTGGGATGTT 60.105 50.000 0.00 0.00 0.00 2.71
5784 30264 1.047801 GGGTGCTTTTGGGATGTTGT 58.952 50.000 0.00 0.00 0.00 3.32
5785 30265 1.000843 GGGTGCTTTTGGGATGTTGTC 59.999 52.381 0.00 0.00 0.00 3.18
5786 30266 1.963515 GGTGCTTTTGGGATGTTGTCT 59.036 47.619 0.00 0.00 0.00 3.41
5787 30267 2.029918 GGTGCTTTTGGGATGTTGTCTC 60.030 50.000 0.00 0.00 0.00 3.36
5791 30271 1.790755 TTTGGGATGTTGTCTCGACG 58.209 50.000 0.00 0.00 0.00 5.12
5792 30272 0.037697 TTGGGATGTTGTCTCGACGG 60.038 55.000 0.00 0.00 0.00 4.79
5793 30273 1.183030 TGGGATGTTGTCTCGACGGT 61.183 55.000 0.00 0.00 0.00 4.83
5794 30274 0.813184 GGGATGTTGTCTCGACGGTA 59.187 55.000 0.00 0.00 0.00 4.02
5795 30275 1.202268 GGGATGTTGTCTCGACGGTAG 60.202 57.143 0.00 0.00 0.00 3.18
5796 30276 1.202268 GGATGTTGTCTCGACGGTAGG 60.202 57.143 0.00 0.00 0.00 3.18
5797 30277 1.471684 GATGTTGTCTCGACGGTAGGT 59.528 52.381 0.00 0.00 0.00 3.08
5801 30281 1.154073 GTCTCGACGGTAGGTGTGC 60.154 63.158 0.00 0.00 0.00 4.57
5802 30282 1.601477 TCTCGACGGTAGGTGTGCA 60.601 57.895 0.00 0.00 0.00 4.57
5803 30283 1.443872 CTCGACGGTAGGTGTGCAC 60.444 63.158 10.75 10.75 0.00 4.57
5804 30284 1.863662 CTCGACGGTAGGTGTGCACT 61.864 60.000 19.41 0.00 0.00 4.40
5807 30287 1.145803 GACGGTAGGTGTGCACTTTC 58.854 55.000 19.41 8.43 0.00 2.62
5810 30290 1.429463 GGTAGGTGTGCACTTTCTCG 58.571 55.000 19.41 0.00 0.00 4.04
5811 30291 0.790814 GTAGGTGTGCACTTTCTCGC 59.209 55.000 19.41 6.03 0.00 5.03
5812 30292 0.320421 TAGGTGTGCACTTTCTCGCC 60.320 55.000 19.41 6.30 0.00 5.54
5813 30293 2.551270 GTGTGCACTTTCTCGCCG 59.449 61.111 19.41 0.00 0.00 6.46
5816 30296 0.249531 TGTGCACTTTCTCGCCGTTA 60.250 50.000 19.41 0.00 0.00 3.18
5817 30297 0.863144 GTGCACTTTCTCGCCGTTAA 59.137 50.000 10.32 0.00 0.00 2.01
5829 30497 1.429148 GCCGTTAATGTCGGGAGCTG 61.429 60.000 0.00 0.00 46.90 4.24
5841 30509 0.181350 GGGAGCTGGTGATGGTAAGG 59.819 60.000 0.00 0.00 0.00 2.69
5850 30518 1.065418 GTGATGGTAAGGTGAGGGTGG 60.065 57.143 0.00 0.00 0.00 4.61
5856 30524 1.697982 GTAAGGTGAGGGTGGTGTCTT 59.302 52.381 0.00 0.00 0.00 3.01
5863 30531 2.814835 GGGTGGTGTCTTCGGTGGT 61.815 63.158 0.00 0.00 0.00 4.16
5865 30533 1.597027 GTGGTGTCTTCGGTGGTGG 60.597 63.158 0.00 0.00 0.00 4.61
5867 30535 2.814835 GGTGTCTTCGGTGGTGGGT 61.815 63.158 0.00 0.00 0.00 4.51
5870 30538 3.307906 TCTTCGGTGGTGGGTCCG 61.308 66.667 0.00 0.00 46.93 4.79
5879 30547 4.280019 GTGGGTCCGTTTGGGGCT 62.280 66.667 0.00 0.00 41.51 5.19
5893 30561 1.250840 GGGGCTGACCATTGGTTGTC 61.251 60.000 10.29 7.73 42.91 3.18
5905 30573 0.106268 TGGTTGTCAGTGTTGGGCAT 60.106 50.000 0.00 0.00 0.00 4.40
5909 30577 1.039068 TGTCAGTGTTGGGCATTTGG 58.961 50.000 0.00 0.00 0.00 3.28
5920 30588 0.037975 GGCATTTGGAGCACACTTGG 60.038 55.000 0.00 0.00 0.00 3.61
5931 30599 1.733389 GCACACTTGGCATGCATGTAC 60.733 52.381 26.79 19.92 39.23 2.90
5933 30601 0.099259 CACTTGGCATGCATGTACCG 59.901 55.000 26.79 15.57 0.00 4.02
5948 30616 2.159338 TGTACCGTTAGACGAATCAGGC 60.159 50.000 1.51 0.00 46.05 4.85
5954 30622 0.975556 TAGACGAATCAGGCTGGCCA 60.976 55.000 15.73 4.71 38.92 5.36
5965 30633 2.596851 GCTGGCCACCCTCTCAAGA 61.597 63.158 0.00 0.00 0.00 3.02
5972 30640 0.900647 CACCCTCTCAAGACCGGAGT 60.901 60.000 9.46 0.00 34.04 3.85
5974 30642 0.612174 CCCTCTCAAGACCGGAGTGA 60.612 60.000 9.46 7.42 34.04 3.41
5977 30645 0.959553 TCTCAAGACCGGAGTGACAC 59.040 55.000 9.46 0.00 34.04 3.67
5981 30649 1.048601 AAGACCGGAGTGACACATGT 58.951 50.000 9.46 0.00 0.00 3.21
6013 30732 2.357034 TCTTGTCCTTCGCGGCAC 60.357 61.111 6.13 0.00 0.00 5.01
6039 30758 0.514691 GCTCTTCGGTGAAGTTGCAG 59.485 55.000 16.12 5.86 40.24 4.41
6044 30769 1.098869 TCGGTGAAGTTGCAGCAAAA 58.901 45.000 10.11 0.00 36.11 2.44
6046 30771 2.053627 CGGTGAAGTTGCAGCAAAATC 58.946 47.619 10.11 11.60 36.11 2.17
6056 30781 1.933853 GCAGCAAAATCGTCGGTCTAT 59.066 47.619 0.00 0.00 0.00 1.98
6078 30803 2.046700 ATGGTTGGCGGTGTACGG 60.047 61.111 0.00 0.00 44.51 4.02
6079 30804 2.886134 ATGGTTGGCGGTGTACGGT 61.886 57.895 0.00 0.00 44.51 4.83
6080 30805 3.045492 GGTTGGCGGTGTACGGTG 61.045 66.667 0.00 0.00 44.51 4.94
6081 30806 2.029369 GTTGGCGGTGTACGGTGA 59.971 61.111 0.00 0.00 44.51 4.02
6082 30807 2.029369 TTGGCGGTGTACGGTGAC 59.971 61.111 0.00 0.00 44.51 3.67
6083 30808 2.794028 TTGGCGGTGTACGGTGACA 61.794 57.895 0.00 0.00 44.51 3.58
6088 30813 4.981415 GTGTACGGTGACACCTCC 57.019 61.111 22.14 10.08 43.30 4.30
6089 30814 2.348665 GTGTACGGTGACACCTCCT 58.651 57.895 22.14 7.24 43.30 3.69
6090 30815 0.677842 GTGTACGGTGACACCTCCTT 59.322 55.000 22.14 6.60 43.30 3.36
6091 30816 1.069668 GTGTACGGTGACACCTCCTTT 59.930 52.381 22.14 4.24 43.30 3.11
6092 30817 1.764134 TGTACGGTGACACCTCCTTTT 59.236 47.619 22.14 2.57 35.66 2.27
6093 30818 2.171027 TGTACGGTGACACCTCCTTTTT 59.829 45.455 22.14 0.93 35.66 1.94
6117 30842 9.939802 TTTTTAGCAAAAACAGTAGGGTAAAAA 57.060 25.926 12.82 12.82 43.34 1.94
6118 30843 8.929827 TTTAGCAAAAACAGTAGGGTAAAAAC 57.070 30.769 0.00 0.00 31.06 2.43
6119 30844 5.909477 AGCAAAAACAGTAGGGTAAAAACC 58.091 37.500 0.00 0.00 0.00 3.27
6130 30855 4.916041 GGGTAAAAACCCTACAGTAGGT 57.084 45.455 23.04 10.21 46.39 3.08
6131 30856 4.582869 GGGTAAAAACCCTACAGTAGGTG 58.417 47.826 23.04 16.86 46.39 4.00
6132 30857 4.042062 GGGTAAAAACCCTACAGTAGGTGT 59.958 45.833 23.04 17.43 46.39 4.16
6133 30858 5.248248 GGGTAAAAACCCTACAGTAGGTGTA 59.752 44.000 23.04 4.02 46.39 2.90
6134 30859 6.166279 GGTAAAAACCCTACAGTAGGTGTAC 58.834 44.000 23.04 14.38 44.73 2.90
6135 30860 5.892524 AAAAACCCTACAGTAGGTGTACA 57.107 39.130 23.04 0.00 44.73 2.90
6140 30865 4.465305 ACCCTACAGTAGGTGTACAATGAC 59.535 45.833 23.04 0.00 44.73 3.06
6151 30876 4.453136 GGTGTACAATGACGCCTCTTTTAA 59.547 41.667 0.00 0.00 45.03 1.52
6153 30878 6.021596 GTGTACAATGACGCCTCTTTTAATG 58.978 40.000 0.00 0.00 0.00 1.90
6154 30879 4.701956 ACAATGACGCCTCTTTTAATGG 57.298 40.909 0.00 0.00 0.00 3.16
6155 30880 4.079253 ACAATGACGCCTCTTTTAATGGT 58.921 39.130 0.00 0.00 0.00 3.55
6156 30881 5.250200 ACAATGACGCCTCTTTTAATGGTA 58.750 37.500 0.00 0.00 0.00 3.25
6157 30882 5.708230 ACAATGACGCCTCTTTTAATGGTAA 59.292 36.000 0.00 0.00 0.00 2.85
6158 30883 6.377146 ACAATGACGCCTCTTTTAATGGTAAT 59.623 34.615 0.00 0.00 0.00 1.89
6159 30884 7.554835 ACAATGACGCCTCTTTTAATGGTAATA 59.445 33.333 0.00 0.00 0.00 0.98
6160 30885 8.402472 CAATGACGCCTCTTTTAATGGTAATAA 58.598 33.333 0.00 0.00 0.00 1.40
6161 30886 8.691661 ATGACGCCTCTTTTAATGGTAATAAT 57.308 30.769 0.00 0.00 0.00 1.28
6162 30887 7.925993 TGACGCCTCTTTTAATGGTAATAATG 58.074 34.615 0.00 0.00 0.00 1.90
6163 30888 7.771361 TGACGCCTCTTTTAATGGTAATAATGA 59.229 33.333 0.00 0.00 0.00 2.57
6164 30889 8.691661 ACGCCTCTTTTAATGGTAATAATGAT 57.308 30.769 0.00 0.00 0.00 2.45
6165 30890 9.787435 ACGCCTCTTTTAATGGTAATAATGATA 57.213 29.630 0.00 0.00 0.00 2.15
6178 30903 8.194104 TGGTAATAATGATAACACATTGTTGGC 58.806 33.333 0.00 0.00 41.30 4.52
6179 30904 8.194104 GGTAATAATGATAACACATTGTTGGCA 58.806 33.333 0.00 0.87 41.30 4.92
6180 30905 9.236691 GTAATAATGATAACACATTGTTGGCAG 57.763 33.333 0.00 0.00 41.30 4.85
6181 30906 5.981088 AATGATAACACATTGTTGGCAGA 57.019 34.783 1.73 0.00 41.30 4.26
6182 30907 5.981088 ATGATAACACATTGTTGGCAGAA 57.019 34.783 1.73 0.00 41.30 3.02
6183 30908 5.981088 TGATAACACATTGTTGGCAGAAT 57.019 34.783 1.73 0.00 41.30 2.40
6184 30909 7.643569 ATGATAACACATTGTTGGCAGAATA 57.356 32.000 1.73 0.00 41.30 1.75
6185 30910 7.459795 TGATAACACATTGTTGGCAGAATAA 57.540 32.000 1.73 0.00 41.30 1.40
6186 30911 8.065473 TGATAACACATTGTTGGCAGAATAAT 57.935 30.769 1.73 0.00 41.30 1.28
6187 30912 7.975058 TGATAACACATTGTTGGCAGAATAATG 59.025 33.333 12.67 12.67 41.30 1.90
6188 30913 5.075858 ACACATTGTTGGCAGAATAATGG 57.924 39.130 16.41 10.49 34.40 3.16
6189 30914 4.527816 ACACATTGTTGGCAGAATAATGGT 59.472 37.500 16.41 10.91 34.40 3.55
6190 30915 5.714333 ACACATTGTTGGCAGAATAATGGTA 59.286 36.000 16.41 0.00 34.40 3.25
6191 30916 6.380846 ACACATTGTTGGCAGAATAATGGTAT 59.619 34.615 16.41 4.42 34.40 2.73
6192 30917 7.093377 ACACATTGTTGGCAGAATAATGGTATT 60.093 33.333 16.41 0.00 34.40 1.89
6193 30918 7.223193 CACATTGTTGGCAGAATAATGGTATTG 59.777 37.037 16.41 6.62 34.40 1.90
6194 30919 5.850557 TGTTGGCAGAATAATGGTATTGG 57.149 39.130 0.00 0.00 29.69 3.16
6195 30920 5.514169 TGTTGGCAGAATAATGGTATTGGA 58.486 37.500 0.00 0.00 29.69 3.53
6196 30921 6.135454 TGTTGGCAGAATAATGGTATTGGAT 58.865 36.000 0.00 0.00 29.69 3.41
6197 30922 7.293828 TGTTGGCAGAATAATGGTATTGGATA 58.706 34.615 0.00 0.00 29.69 2.59
6198 30923 7.448161 TGTTGGCAGAATAATGGTATTGGATAG 59.552 37.037 0.00 0.00 29.69 2.08
6199 30924 7.328404 TGGCAGAATAATGGTATTGGATAGA 57.672 36.000 0.00 0.00 29.69 1.98
6200 30925 7.932134 TGGCAGAATAATGGTATTGGATAGAT 58.068 34.615 0.00 0.00 29.69 1.98
6201 30926 8.049117 TGGCAGAATAATGGTATTGGATAGATC 58.951 37.037 0.00 0.00 29.69 2.75
6235 30960 9.692749 TGATTACTATGAGATTTAATCGTCACC 57.307 33.333 8.47 0.00 34.83 4.02
6236 30961 9.141400 GATTACTATGAGATTTAATCGTCACCC 57.859 37.037 8.47 0.00 0.00 4.61
6237 30962 6.732896 ACTATGAGATTTAATCGTCACCCT 57.267 37.500 8.47 0.00 0.00 4.34
6238 30963 6.516718 ACTATGAGATTTAATCGTCACCCTG 58.483 40.000 8.47 4.28 0.00 4.45
6239 30964 4.819105 TGAGATTTAATCGTCACCCTGT 57.181 40.909 0.00 0.00 0.00 4.00
6240 30965 5.160607 TGAGATTTAATCGTCACCCTGTT 57.839 39.130 0.00 0.00 0.00 3.16
6241 30966 4.935205 TGAGATTTAATCGTCACCCTGTTG 59.065 41.667 0.00 0.00 0.00 3.33
6242 30967 4.906618 AGATTTAATCGTCACCCTGTTGT 58.093 39.130 0.00 0.00 0.00 3.32
6243 30968 5.313712 AGATTTAATCGTCACCCTGTTGTT 58.686 37.500 0.00 0.00 0.00 2.83
6244 30969 4.822036 TTTAATCGTCACCCTGTTGTTG 57.178 40.909 0.00 0.00 0.00 3.33
6245 30970 2.631160 AATCGTCACCCTGTTGTTGA 57.369 45.000 0.00 0.00 0.00 3.18
6246 30971 2.859165 ATCGTCACCCTGTTGTTGAT 57.141 45.000 0.00 0.00 0.00 2.57
6247 30972 3.973206 ATCGTCACCCTGTTGTTGATA 57.027 42.857 0.00 0.00 0.00 2.15
6248 30973 3.973206 TCGTCACCCTGTTGTTGATAT 57.027 42.857 0.00 0.00 0.00 1.63
6249 30974 4.280436 TCGTCACCCTGTTGTTGATATT 57.720 40.909 0.00 0.00 0.00 1.28
6250 30975 4.647611 TCGTCACCCTGTTGTTGATATTT 58.352 39.130 0.00 0.00 0.00 1.40
6251 30976 5.067273 TCGTCACCCTGTTGTTGATATTTT 58.933 37.500 0.00 0.00 0.00 1.82
6252 30977 5.180492 TCGTCACCCTGTTGTTGATATTTTC 59.820 40.000 0.00 0.00 0.00 2.29
6253 30978 5.049060 CGTCACCCTGTTGTTGATATTTTCA 60.049 40.000 0.00 0.00 0.00 2.69
6254 30979 6.349280 CGTCACCCTGTTGTTGATATTTTCAT 60.349 38.462 0.00 0.00 33.34 2.57
6255 30980 7.148323 CGTCACCCTGTTGTTGATATTTTCATA 60.148 37.037 0.00 0.00 33.34 2.15
6256 30981 8.686334 GTCACCCTGTTGTTGATATTTTCATAT 58.314 33.333 0.00 0.00 33.34 1.78
6257 30982 9.253832 TCACCCTGTTGTTGATATTTTCATATT 57.746 29.630 0.00 0.00 33.34 1.28
6289 31014 5.428496 CGTATAATCACGTCCTTAGACCA 57.572 43.478 0.00 0.00 40.12 4.02
6290 31015 6.010294 CGTATAATCACGTCCTTAGACCAT 57.990 41.667 0.00 0.00 40.12 3.55
6291 31016 5.856986 CGTATAATCACGTCCTTAGACCATG 59.143 44.000 0.00 0.00 40.12 3.66
6292 31017 6.293790 CGTATAATCACGTCCTTAGACCATGA 60.294 42.308 0.00 0.00 40.12 3.07
6293 31018 4.392921 AATCACGTCCTTAGACCATGAG 57.607 45.455 0.00 0.00 40.12 2.90
6294 31019 3.081710 TCACGTCCTTAGACCATGAGA 57.918 47.619 0.00 0.00 40.12 3.27
6295 31020 3.427573 TCACGTCCTTAGACCATGAGAA 58.572 45.455 0.00 0.00 40.12 2.87
6296 31021 4.023980 TCACGTCCTTAGACCATGAGAAT 58.976 43.478 0.00 0.00 40.12 2.40
6297 31022 5.198207 TCACGTCCTTAGACCATGAGAATA 58.802 41.667 0.00 0.00 40.12 1.75
6298 31023 5.833667 TCACGTCCTTAGACCATGAGAATAT 59.166 40.000 0.00 0.00 40.12 1.28
6299 31024 6.323996 TCACGTCCTTAGACCATGAGAATATT 59.676 38.462 0.00 0.00 40.12 1.28
6300 31025 6.422100 CACGTCCTTAGACCATGAGAATATTG 59.578 42.308 0.00 0.00 40.12 1.90
6301 31026 6.098409 ACGTCCTTAGACCATGAGAATATTGT 59.902 38.462 0.00 0.00 40.12 2.71
6302 31027 6.422100 CGTCCTTAGACCATGAGAATATTGTG 59.578 42.308 0.00 0.00 40.12 3.33
6303 31028 6.708054 GTCCTTAGACCATGAGAATATTGTGG 59.292 42.308 0.00 0.00 37.00 4.17
6304 31029 6.615316 TCCTTAGACCATGAGAATATTGTGGA 59.385 38.462 10.90 0.00 34.13 4.02
6305 31030 6.708054 CCTTAGACCATGAGAATATTGTGGAC 59.292 42.308 10.90 6.50 34.13 4.02
6306 31031 5.041191 AGACCATGAGAATATTGTGGACC 57.959 43.478 10.90 0.00 34.13 4.46
6307 31032 4.723789 AGACCATGAGAATATTGTGGACCT 59.276 41.667 10.90 6.35 34.13 3.85
6308 31033 5.192522 AGACCATGAGAATATTGTGGACCTT 59.807 40.000 10.90 0.00 34.13 3.50
6309 31034 5.440610 ACCATGAGAATATTGTGGACCTTC 58.559 41.667 10.90 0.00 34.13 3.46
6310 31035 5.044919 ACCATGAGAATATTGTGGACCTTCA 60.045 40.000 10.90 0.00 34.13 3.02
6311 31036 6.066690 CCATGAGAATATTGTGGACCTTCAT 58.933 40.000 0.00 0.00 31.59 2.57
6312 31037 7.147320 ACCATGAGAATATTGTGGACCTTCATA 60.147 37.037 10.90 0.00 34.13 2.15
6313 31038 7.173907 CCATGAGAATATTGTGGACCTTCATAC 59.826 40.741 0.00 0.00 31.59 2.39
6314 31039 6.591935 TGAGAATATTGTGGACCTTCATACC 58.408 40.000 0.00 0.00 0.00 2.73
6315 31040 5.611374 AGAATATTGTGGACCTTCATACCG 58.389 41.667 0.00 0.00 0.00 4.02
6316 31041 5.365605 AGAATATTGTGGACCTTCATACCGA 59.634 40.000 0.00 0.00 0.00 4.69
6317 31042 3.992943 ATTGTGGACCTTCATACCGAA 57.007 42.857 0.00 0.00 0.00 4.30
6318 31043 2.754946 TGTGGACCTTCATACCGAAC 57.245 50.000 0.00 0.00 0.00 3.95
6319 31044 1.067425 TGTGGACCTTCATACCGAACG 60.067 52.381 0.00 0.00 0.00 3.95
6320 31045 0.533491 TGGACCTTCATACCGAACGG 59.467 55.000 11.83 11.83 42.03 4.44
6331 31056 2.547026 CCGAACGGTTACTTTGGGG 58.453 57.895 4.99 0.00 0.00 4.96
6332 31057 0.250424 CCGAACGGTTACTTTGGGGT 60.250 55.000 4.99 0.00 0.00 4.95
6333 31058 1.596603 CGAACGGTTACTTTGGGGTT 58.403 50.000 0.00 0.00 0.00 4.11
6334 31059 1.948834 CGAACGGTTACTTTGGGGTTT 59.051 47.619 0.00 0.00 0.00 3.27
6335 31060 2.031769 CGAACGGTTACTTTGGGGTTTC 60.032 50.000 0.00 0.00 0.00 2.78
6336 31061 1.985473 ACGGTTACTTTGGGGTTTCC 58.015 50.000 0.00 0.00 0.00 3.13
6337 31062 1.214923 ACGGTTACTTTGGGGTTTCCA 59.785 47.619 0.00 0.00 45.43 3.53
6348 31073 2.553172 TGGGGTTTCCAAACGTTATTCG 59.447 45.455 0.00 0.00 43.84 3.34
6349 31074 2.553602 GGGGTTTCCAAACGTTATTCGT 59.446 45.455 0.00 0.00 44.69 3.85
6350 31075 3.750652 GGGGTTTCCAAACGTTATTCGTA 59.249 43.478 0.00 0.00 43.15 3.43
6351 31076 4.215185 GGGGTTTCCAAACGTTATTCGTAA 59.785 41.667 0.00 0.00 43.15 3.18
6352 31077 5.278218 GGGGTTTCCAAACGTTATTCGTAAA 60.278 40.000 0.00 0.00 43.15 2.01
6353 31078 6.570186 GGGGTTTCCAAACGTTATTCGTAAAT 60.570 38.462 0.00 0.00 43.15 1.40
6354 31079 8.516944 GGGGTTTCCAAACGTTATTCGTAAATG 61.517 40.741 0.00 0.00 43.15 2.32
6362 31087 5.977171 CGTTATTCGTAAATGGGTGATCA 57.023 39.130 0.00 0.00 34.52 2.92
6363 31088 6.539649 CGTTATTCGTAAATGGGTGATCAT 57.460 37.500 0.00 0.00 34.52 2.45
6364 31089 7.646446 CGTTATTCGTAAATGGGTGATCATA 57.354 36.000 0.00 0.00 34.52 2.15
6365 31090 8.078959 CGTTATTCGTAAATGGGTGATCATAA 57.921 34.615 0.00 0.00 34.52 1.90
6366 31091 8.007716 CGTTATTCGTAAATGGGTGATCATAAC 58.992 37.037 0.00 0.00 34.52 1.89
6367 31092 5.977171 TTCGTAAATGGGTGATCATAACG 57.023 39.130 0.00 2.25 37.68 3.18
6368 31093 4.373527 TCGTAAATGGGTGATCATAACGG 58.626 43.478 0.00 0.00 37.31 4.44
6369 31094 4.124238 CGTAAATGGGTGATCATAACGGT 58.876 43.478 0.00 0.00 35.18 4.83
6370 31095 5.068855 TCGTAAATGGGTGATCATAACGGTA 59.931 40.000 0.00 0.00 37.31 4.02
6371 31096 5.754406 CGTAAATGGGTGATCATAACGGTAA 59.246 40.000 0.00 0.00 35.18 2.85
6372 31097 6.292488 CGTAAATGGGTGATCATAACGGTAAC 60.292 42.308 0.00 0.00 35.18 2.50
6373 31098 5.367945 AATGGGTGATCATAACGGTAACT 57.632 39.130 0.00 0.00 0.00 2.24
6374 31099 4.829872 TGGGTGATCATAACGGTAACTT 57.170 40.909 0.00 0.00 0.00 2.66
6375 31100 4.761975 TGGGTGATCATAACGGTAACTTC 58.238 43.478 0.00 0.00 0.00 3.01
6376 31101 4.124970 GGGTGATCATAACGGTAACTTCC 58.875 47.826 0.00 0.00 0.00 3.46
6385 31110 2.214387 CGGTAACTTCCGGGTACATC 57.786 55.000 0.00 0.00 45.88 3.06
6386 31111 1.477700 CGGTAACTTCCGGGTACATCA 59.522 52.381 0.00 0.00 45.88 3.07
6387 31112 2.480759 CGGTAACTTCCGGGTACATCAG 60.481 54.545 0.00 0.00 45.88 2.90
6388 31113 2.762327 GGTAACTTCCGGGTACATCAGA 59.238 50.000 0.00 0.00 39.73 3.27
6389 31114 3.196254 GGTAACTTCCGGGTACATCAGAA 59.804 47.826 0.00 0.00 39.73 3.02
6390 31115 4.322953 GGTAACTTCCGGGTACATCAGAAA 60.323 45.833 0.00 0.00 39.73 2.52
6391 31116 4.360951 AACTTCCGGGTACATCAGAAAA 57.639 40.909 0.00 0.00 0.00 2.29
6392 31117 3.939066 ACTTCCGGGTACATCAGAAAAG 58.061 45.455 0.00 0.00 0.00 2.27
6393 31118 3.326880 ACTTCCGGGTACATCAGAAAAGT 59.673 43.478 0.00 0.00 0.00 2.66
6394 31119 4.202430 ACTTCCGGGTACATCAGAAAAGTT 60.202 41.667 0.00 0.00 0.00 2.66
6395 31120 4.360951 TCCGGGTACATCAGAAAAGTTT 57.639 40.909 0.00 0.00 0.00 2.66
6396 31121 4.069304 TCCGGGTACATCAGAAAAGTTTG 58.931 43.478 0.00 0.00 0.00 2.93
6397 31122 3.818773 CCGGGTACATCAGAAAAGTTTGT 59.181 43.478 0.00 0.00 0.00 2.83
6398 31123 4.083484 CCGGGTACATCAGAAAAGTTTGTC 60.083 45.833 0.00 0.00 0.00 3.18
6399 31124 4.513692 CGGGTACATCAGAAAAGTTTGTCA 59.486 41.667 0.00 0.00 0.00 3.58
6400 31125 5.560183 CGGGTACATCAGAAAAGTTTGTCAC 60.560 44.000 0.00 0.00 0.00 3.67
6401 31126 5.440685 GGTACATCAGAAAAGTTTGTCACG 58.559 41.667 0.00 0.00 0.00 4.35
6402 31127 4.552166 ACATCAGAAAAGTTTGTCACGG 57.448 40.909 0.00 0.00 0.00 4.94
6403 31128 3.315191 ACATCAGAAAAGTTTGTCACGGG 59.685 43.478 0.00 0.00 0.00 5.28
6404 31129 3.269538 TCAGAAAAGTTTGTCACGGGA 57.730 42.857 0.00 0.00 0.00 5.14
6405 31130 2.940410 TCAGAAAAGTTTGTCACGGGAC 59.060 45.455 11.93 11.93 44.57 4.46
6406 31131 2.943033 CAGAAAAGTTTGTCACGGGACT 59.057 45.455 20.37 0.00 44.61 3.85
6407 31132 3.002348 CAGAAAAGTTTGTCACGGGACTC 59.998 47.826 20.37 6.10 44.61 3.36
6408 31133 1.578583 AAAGTTTGTCACGGGACTCG 58.421 50.000 20.37 0.00 44.61 4.18
6409 31134 0.748450 AAGTTTGTCACGGGACTCGA 59.252 50.000 20.37 1.95 44.61 4.04
6410 31135 0.966920 AGTTTGTCACGGGACTCGAT 59.033 50.000 20.37 0.00 44.61 3.59
6411 31136 2.165167 AGTTTGTCACGGGACTCGATA 58.835 47.619 20.37 0.00 44.61 2.92
6412 31137 2.163815 AGTTTGTCACGGGACTCGATAG 59.836 50.000 20.37 0.00 44.61 2.08
6413 31138 1.830279 TTGTCACGGGACTCGATAGT 58.170 50.000 20.37 0.00 44.61 2.12
6414 31139 2.696989 TGTCACGGGACTCGATAGTA 57.303 50.000 20.37 0.00 44.61 1.82
6415 31140 2.283298 TGTCACGGGACTCGATAGTAC 58.717 52.381 20.37 0.00 44.61 2.73
6416 31141 2.283298 GTCACGGGACTCGATAGTACA 58.717 52.381 11.49 0.00 38.45 2.90
6417 31142 2.679837 GTCACGGGACTCGATAGTACAA 59.320 50.000 11.49 0.00 38.45 2.41
6418 31143 2.941064 TCACGGGACTCGATAGTACAAG 59.059 50.000 0.00 0.00 38.45 3.16
6419 31144 2.941064 CACGGGACTCGATAGTACAAGA 59.059 50.000 0.00 0.00 38.45 3.02
6420 31145 2.941720 ACGGGACTCGATAGTACAAGAC 59.058 50.000 0.00 0.00 38.45 3.01
6421 31146 3.204526 CGGGACTCGATAGTACAAGACT 58.795 50.000 0.00 0.00 38.45 3.24
6422 31147 3.002451 CGGGACTCGATAGTACAAGACTG 59.998 52.174 0.00 0.00 38.45 3.51
6423 31148 3.315749 GGGACTCGATAGTACAAGACTGG 59.684 52.174 0.00 0.00 38.45 4.00
6424 31149 4.197750 GGACTCGATAGTACAAGACTGGA 58.802 47.826 0.00 0.00 39.39 3.86
6425 31150 4.639310 GGACTCGATAGTACAAGACTGGAA 59.361 45.833 0.00 0.00 39.39 3.53
6426 31151 5.299782 GGACTCGATAGTACAAGACTGGAAT 59.700 44.000 0.00 0.00 39.39 3.01
6427 31152 6.183360 GGACTCGATAGTACAAGACTGGAATT 60.183 42.308 0.00 0.00 39.39 2.17
6428 31153 7.171630 ACTCGATAGTACAAGACTGGAATTT 57.828 36.000 0.00 0.00 39.39 1.82
6429 31154 7.036220 ACTCGATAGTACAAGACTGGAATTTG 58.964 38.462 0.00 0.00 39.39 2.32
6430 31155 5.810587 TCGATAGTACAAGACTGGAATTTGC 59.189 40.000 0.00 0.00 39.39 3.68
6431 31156 5.812642 CGATAGTACAAGACTGGAATTTGCT 59.187 40.000 0.00 0.00 39.39 3.91
6432 31157 6.313905 CGATAGTACAAGACTGGAATTTGCTT 59.686 38.462 0.00 0.00 39.39 3.91
6433 31158 5.948992 AGTACAAGACTGGAATTTGCTTC 57.051 39.130 0.00 0.00 36.87 3.86
6434 31159 5.625150 AGTACAAGACTGGAATTTGCTTCT 58.375 37.500 0.00 0.00 36.87 2.85
6435 31160 5.703130 AGTACAAGACTGGAATTTGCTTCTC 59.297 40.000 0.00 0.00 36.87 2.87
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 4495 0.948623 TGTCCTGCGAACATGGTTCG 60.949 55.000 22.91 22.91 44.06 3.95
41 4497 0.889186 GGTGTCCTGCGAACATGGTT 60.889 55.000 0.00 0.00 0.00 3.67
49 4505 0.534203 GAACAAAGGGTGTCCTGCGA 60.534 55.000 0.00 0.00 44.07 5.10
102 4559 1.410507 CCCCAGATGGTCATTGCATCA 60.411 52.381 0.00 0.00 0.00 3.07
105 4562 0.256752 CTCCCCAGATGGTCATTGCA 59.743 55.000 0.00 0.00 0.00 4.08
106 4563 1.105759 GCTCCCCAGATGGTCATTGC 61.106 60.000 0.00 0.00 0.00 3.56
107 4564 0.549950 AGCTCCCCAGATGGTCATTG 59.450 55.000 0.00 0.00 0.00 2.82
109 4566 2.228711 CAGCTCCCCAGATGGTCAT 58.771 57.895 0.00 0.00 31.89 3.06
149 4606 3.415212 ACAACATGACCATCCTTCACTG 58.585 45.455 0.00 0.00 0.00 3.66
317 7208 3.458163 GCCATCGGAGGTGGTCGA 61.458 66.667 0.98 0.00 39.01 4.20
338 7229 4.039245 CACCTCTCCTTCCTTCGCATATAA 59.961 45.833 0.00 0.00 0.00 0.98
399 7292 0.035458 CGAAGTATCCTGGCCATCCC 59.965 60.000 5.51 0.00 0.00 3.85
497 7392 4.452455 ACCTCACAAGAAACGAGCAAATAG 59.548 41.667 0.00 0.00 0.00 1.73
630 7549 3.090037 AGTAGACAAGAGCGCCTAAGAA 58.910 45.455 2.29 0.00 0.00 2.52
635 7554 0.969894 ACAAGTAGACAAGAGCGCCT 59.030 50.000 2.29 0.00 0.00 5.52
706 8184 8.560576 AATTGAATGACGAGTAACAAAAGTTG 57.439 30.769 0.00 0.00 0.00 3.16
744 8222 4.488126 ACCAAACATGTTCACGAGAATG 57.512 40.909 12.39 3.62 35.92 2.67
851 11371 1.621814 CTCACCCTTGTCCGGTAAAGA 59.378 52.381 17.10 1.07 30.42 2.52
927 14825 4.127171 CGACAAAGAAGAAGAACTGGGAA 58.873 43.478 0.00 0.00 0.00 3.97
938 14836 1.549170 GCCCCTAGACGACAAAGAAGA 59.451 52.381 0.00 0.00 0.00 2.87
939 14837 1.550976 AGCCCCTAGACGACAAAGAAG 59.449 52.381 0.00 0.00 0.00 2.85
940 14838 1.640917 AGCCCCTAGACGACAAAGAA 58.359 50.000 0.00 0.00 0.00 2.52
1074 20952 2.942796 CGCCAGCACCACCTGTCTA 61.943 63.158 0.00 0.00 0.00 2.59
1112 20990 1.319947 TGTGGAGTAGGGGGAGATCT 58.680 55.000 0.00 0.00 0.00 2.75
1118 20996 0.322546 GTTGCTTGTGGAGTAGGGGG 60.323 60.000 0.00 0.00 0.00 5.40
1211 21099 6.565435 CGAAGATCGAAATTTGGATCCATGAG 60.565 42.308 28.99 17.37 43.74 2.90
1437 21349 9.262472 GCGTATTCTTTACTGTATTCTGTTTTG 57.738 33.333 0.00 0.00 0.00 2.44
1438 21350 8.166706 CGCGTATTCTTTACTGTATTCTGTTTT 58.833 33.333 0.00 0.00 0.00 2.43
1443 21355 5.345702 TGCGCGTATTCTTTACTGTATTCT 58.654 37.500 8.43 0.00 0.00 2.40
1444 21356 5.630896 TGCGCGTATTCTTTACTGTATTC 57.369 39.130 8.43 0.00 0.00 1.75
1449 21361 4.317839 GGTGTATGCGCGTATTCTTTACTG 60.318 45.833 16.54 0.00 0.00 2.74
1518 21500 0.240945 CGTACTCGTAAACGGTGGGT 59.759 55.000 2.24 0.68 40.29 4.51
1519 21501 1.072666 GCGTACTCGTAAACGGTGGG 61.073 60.000 2.24 0.00 39.46 4.61
1520 21502 1.072666 GGCGTACTCGTAAACGGTGG 61.073 60.000 2.24 0.00 39.46 4.61
1521 21503 1.398022 CGGCGTACTCGTAAACGGTG 61.398 60.000 0.00 0.00 39.46 4.94
1525 21513 1.408474 CCAGCGGCGTACTCGTAAAC 61.408 60.000 9.37 0.00 39.49 2.01
1571 21579 2.037208 AATTTGGTGGGCCCTCCG 59.963 61.111 32.62 0.00 38.76 4.63
1573 21581 0.034863 TACGAATTTGGTGGGCCCTC 60.035 55.000 25.70 20.64 0.00 4.30
1632 23880 1.005289 ATGGCCAGGAGGGAGTGAT 59.995 57.895 13.05 0.00 40.01 3.06
1641 23889 3.016971 CTGTGGGGATGGCCAGGA 61.017 66.667 13.05 0.00 35.15 3.86
1720 24309 3.382865 GGCTGATGGGGAGAAATTTCTTC 59.617 47.826 21.33 19.15 37.73 2.87
1721 24310 3.369175 GGCTGATGGGGAGAAATTTCTT 58.631 45.455 21.33 5.61 37.73 2.52
1774 24363 4.003788 CCAACTCCACGCCGGTCT 62.004 66.667 1.90 0.00 35.57 3.85
1797 24386 0.030908 CTACCGAATCGAGCCCAGAC 59.969 60.000 3.36 0.00 0.00 3.51
1800 24389 0.974010 AACCTACCGAATCGAGCCCA 60.974 55.000 3.36 0.00 0.00 5.36
1857 24448 5.880054 AAAATGAACACTCGGATTACCAG 57.120 39.130 0.00 0.00 35.59 4.00
1858 24449 6.001460 AGAAAAATGAACACTCGGATTACCA 58.999 36.000 0.00 0.00 35.59 3.25
2073 24681 2.358737 CTGAACGGTGTGCTCCCC 60.359 66.667 0.00 0.00 0.00 4.81
2074 24682 0.818040 AAACTGAACGGTGTGCTCCC 60.818 55.000 0.00 0.00 0.00 4.30
2260 25220 9.620259 AGCCAAAATTGTAAAAATTAACTTCCA 57.380 25.926 0.00 0.00 0.00 3.53
2352 25317 2.116827 ATAAAACGGCATCCAACGGA 57.883 45.000 0.00 0.00 35.55 4.69
2361 25326 0.453793 CGGCCATGAATAAAACGGCA 59.546 50.000 2.24 0.00 44.82 5.69
2470 25439 7.044052 GCAAACAATTCACTGTGTTACTCTTTC 60.044 37.037 7.79 0.00 36.97 2.62
2722 26894 9.515226 AGTAAAGTTATATGCCACTTTTTCTCA 57.485 29.630 12.24 0.00 39.69 3.27
2728 26900 8.769359 AGGTCTAGTAAAGTTATATGCCACTTT 58.231 33.333 11.87 11.87 43.91 2.66
2883 27056 8.791327 AAAGGTTCAAATATTTATGGCAAAGG 57.209 30.769 0.00 0.00 0.00 3.11
2944 27118 5.587043 CCGAAGCCCATGTGTATTTAGTTTA 59.413 40.000 0.00 0.00 0.00 2.01
3068 27246 8.677148 AGCAGAAGATAAAGTCTGTAACAAAA 57.323 30.769 2.90 0.00 42.72 2.44
3110 27292 8.723942 AGAACTTACTACCATGTTTCATGATC 57.276 34.615 10.75 0.00 0.00 2.92
3124 27306 7.063544 CACATGAGTAGGCAAAGAACTTACTAC 59.936 40.741 0.00 12.01 0.00 2.73
3267 27463 7.201758 CCATTTAATGCATGAAGCTGAAGACTA 60.202 37.037 0.00 0.00 45.94 2.59
3396 27598 6.460781 ACTTGATGCATTGTGAACAAATGAT 58.539 32.000 0.00 0.00 39.55 2.45
3449 27652 8.229253 ACAAGTACGAGGTTTAATTCCTTTTT 57.771 30.769 0.00 0.00 35.20 1.94
3603 27953 4.499696 GCAGAGGTTGTGTGCTTAATTGTT 60.500 41.667 0.00 0.00 42.31 2.83
3690 28047 7.255569 TCTACATAGTTGGAAGTCGTACATTG 58.744 38.462 0.00 0.00 0.00 2.82
3861 28225 9.613428 TGTACTCCCATTAGATTTTCAGTTATG 57.387 33.333 0.00 0.00 0.00 1.90
4133 28500 1.542915 CATGCCTTGAAACTGAGTGGG 59.457 52.381 0.00 0.00 0.00 4.61
4134 28501 1.542915 CCATGCCTTGAAACTGAGTGG 59.457 52.381 0.00 0.00 0.00 4.00
4135 28502 2.233271 ACCATGCCTTGAAACTGAGTG 58.767 47.619 0.00 0.00 0.00 3.51
4136 28503 2.664402 ACCATGCCTTGAAACTGAGT 57.336 45.000 0.00 0.00 0.00 3.41
4137 28504 2.416547 CGTACCATGCCTTGAAACTGAG 59.583 50.000 0.00 0.00 0.00 3.35
4138 28505 2.224426 ACGTACCATGCCTTGAAACTGA 60.224 45.455 0.00 0.00 0.00 3.41
4139 28506 2.095768 CACGTACCATGCCTTGAAACTG 60.096 50.000 0.00 0.00 0.00 3.16
4140 28507 2.151202 CACGTACCATGCCTTGAAACT 58.849 47.619 0.00 0.00 0.00 2.66
4141 28508 1.401018 GCACGTACCATGCCTTGAAAC 60.401 52.381 5.61 0.00 37.08 2.78
4142 28509 0.878416 GCACGTACCATGCCTTGAAA 59.122 50.000 5.61 0.00 37.08 2.69
4143 28510 0.250510 TGCACGTACCATGCCTTGAA 60.251 50.000 12.85 0.00 42.69 2.69
4144 28511 0.250510 TTGCACGTACCATGCCTTGA 60.251 50.000 12.85 0.00 42.69 3.02
4145 28512 0.810648 ATTGCACGTACCATGCCTTG 59.189 50.000 12.85 0.00 42.69 3.61
4146 28513 1.544724 AATTGCACGTACCATGCCTT 58.455 45.000 12.85 5.45 42.69 4.35
4147 28514 1.202114 CAAATTGCACGTACCATGCCT 59.798 47.619 12.85 0.16 42.69 4.75
4148 28515 1.627879 CAAATTGCACGTACCATGCC 58.372 50.000 12.85 0.00 42.69 4.40
4149 28516 1.627879 CCAAATTGCACGTACCATGC 58.372 50.000 9.35 9.35 43.68 4.06
4150 28517 1.135141 CCCCAAATTGCACGTACCATG 60.135 52.381 0.00 0.00 0.00 3.66
4151 28518 1.181786 CCCCAAATTGCACGTACCAT 58.818 50.000 0.00 0.00 0.00 3.55
4152 28519 0.178987 ACCCCAAATTGCACGTACCA 60.179 50.000 0.00 0.00 0.00 3.25
4153 28520 0.963225 AACCCCAAATTGCACGTACC 59.037 50.000 0.00 0.00 0.00 3.34
4154 28521 1.338655 ACAACCCCAAATTGCACGTAC 59.661 47.619 0.00 0.00 0.00 3.67
4155 28522 1.693627 ACAACCCCAAATTGCACGTA 58.306 45.000 0.00 0.00 0.00 3.57
4156 28523 0.827368 AACAACCCCAAATTGCACGT 59.173 45.000 0.00 0.00 0.00 4.49
4157 28524 1.216122 CAACAACCCCAAATTGCACG 58.784 50.000 0.00 0.00 0.00 5.34
4158 28525 0.943673 GCAACAACCCCAAATTGCAC 59.056 50.000 3.06 0.00 45.38 4.57
4159 28526 3.393472 GCAACAACCCCAAATTGCA 57.607 47.368 3.06 0.00 45.38 4.08
4160 28527 0.943673 GTGCAACAACCCCAAATTGC 59.056 50.000 0.00 0.94 46.08 3.56
4161 28528 1.134280 TGGTGCAACAACCCCAAATTG 60.134 47.619 0.00 0.00 39.70 2.32
4162 28529 1.207791 TGGTGCAACAACCCCAAATT 58.792 45.000 0.00 0.00 39.70 1.82
4163 28530 1.207791 TTGGTGCAACAACCCCAAAT 58.792 45.000 14.57 0.00 39.70 2.32
4164 28531 1.207791 ATTGGTGCAACAACCCCAAA 58.792 45.000 21.66 0.00 40.16 3.28
4165 28532 1.207791 AATTGGTGCAACAACCCCAA 58.792 45.000 21.66 13.19 39.70 4.12
4166 28533 2.088104 TAATTGGTGCAACAACCCCA 57.912 45.000 21.66 2.74 39.70 4.96
4167 28534 3.767131 AGTATAATTGGTGCAACAACCCC 59.233 43.478 21.66 6.34 39.70 4.95
4168 28535 4.219725 ACAGTATAATTGGTGCAACAACCC 59.780 41.667 21.66 5.97 39.70 4.11
4169 28536 5.385509 ACAGTATAATTGGTGCAACAACC 57.614 39.130 21.66 0.70 39.98 3.77
4170 28537 6.404293 CCCTACAGTATAATTGGTGCAACAAC 60.404 42.308 21.66 7.46 39.98 3.32
4171 28538 5.650266 CCCTACAGTATAATTGGTGCAACAA 59.350 40.000 21.46 21.46 39.98 2.83
4172 28539 5.189928 CCCTACAGTATAATTGGTGCAACA 58.810 41.667 0.00 0.00 39.98 3.33
4173 28540 4.578928 CCCCTACAGTATAATTGGTGCAAC 59.421 45.833 0.00 0.00 0.00 4.17
4174 28541 4.385865 CCCCCTACAGTATAATTGGTGCAA 60.386 45.833 0.00 0.00 0.00 4.08
4175 28542 3.137544 CCCCCTACAGTATAATTGGTGCA 59.862 47.826 0.00 0.00 0.00 4.57
4176 28543 3.137728 ACCCCCTACAGTATAATTGGTGC 59.862 47.826 0.00 0.00 0.00 5.01
4177 28544 5.374071 GAACCCCCTACAGTATAATTGGTG 58.626 45.833 0.00 0.00 0.00 4.17
4178 28545 4.414514 GGAACCCCCTACAGTATAATTGGT 59.585 45.833 0.00 0.00 0.00 3.67
4179 28546 4.981812 GGAACCCCCTACAGTATAATTGG 58.018 47.826 0.00 0.00 0.00 3.16
4193 28560 6.627612 CAGAAAGACTGTAAGGGAACCCCC 62.628 54.167 6.23 0.00 45.84 5.40
4194 28561 3.559384 CAGAAAGACTGTAAGGGAACCCC 60.559 52.174 6.23 0.00 45.84 4.95
4195 28562 3.676093 CAGAAAGACTGTAAGGGAACCC 58.324 50.000 0.94 0.94 45.84 4.11
4225 28592 8.873144 CCCCATATTAAGAAACAATGGATCATT 58.127 33.333 1.26 0.00 39.60 2.57
4226 28593 7.038799 GCCCCATATTAAGAAACAATGGATCAT 60.039 37.037 1.26 0.00 39.60 2.45
4227 28594 6.267471 GCCCCATATTAAGAAACAATGGATCA 59.733 38.462 1.26 0.00 39.60 2.92
4228 28595 6.295292 GGCCCCATATTAAGAAACAATGGATC 60.295 42.308 0.00 0.00 39.60 3.36
4229 28596 5.543790 GGCCCCATATTAAGAAACAATGGAT 59.456 40.000 0.00 0.00 39.60 3.41
4317 28711 6.384224 TCAAGATGTTGATCAAATCACTTGC 58.616 36.000 24.65 9.78 38.50 4.01
4846 29265 7.244192 CCACCTAAGAACGAAAAATGAAGATC 58.756 38.462 0.00 0.00 0.00 2.75
4851 29270 3.504520 GGCCACCTAAGAACGAAAAATGA 59.495 43.478 0.00 0.00 0.00 2.57
5045 29467 0.321122 CCTGTCTCTTGGCAGGTGTC 60.321 60.000 8.38 0.00 45.28 3.67
5174 29602 1.473257 GCATACATCTGCTGGACGGAA 60.473 52.381 0.00 0.00 39.12 4.30
5194 29630 3.181494 TGAAATGAATCAAGCATCGCCTG 60.181 43.478 0.00 0.00 0.00 4.85
5216 29652 1.066143 AGATGCTGAAACCGGTTCGAT 60.066 47.619 22.53 4.66 39.30 3.59
5265 29705 5.476091 AGCTTCAGGTAGCATATACCTTC 57.524 43.478 3.81 0.00 45.06 3.46
5401 29871 3.616219 TGCAGCTGGTTAATCCGTTAAT 58.384 40.909 17.12 0.00 39.52 1.40
5402 29872 3.060736 TGCAGCTGGTTAATCCGTTAA 57.939 42.857 17.12 0.00 39.52 2.01
5403 29873 2.745281 GTTGCAGCTGGTTAATCCGTTA 59.255 45.455 17.12 0.00 39.52 3.18
5404 29874 1.539827 GTTGCAGCTGGTTAATCCGTT 59.460 47.619 17.12 0.00 39.52 4.44
5405 29875 1.165270 GTTGCAGCTGGTTAATCCGT 58.835 50.000 17.12 0.00 39.52 4.69
5406 29876 1.398390 GAGTTGCAGCTGGTTAATCCG 59.602 52.381 17.12 0.00 39.52 4.18
5407 29877 2.421424 CAGAGTTGCAGCTGGTTAATCC 59.579 50.000 17.12 0.00 0.00 3.01
5408 29878 3.338249 TCAGAGTTGCAGCTGGTTAATC 58.662 45.455 17.12 0.00 33.05 1.75
5422 29892 8.043113 TCAAAGTGCATATTGATACTCAGAGTT 58.957 33.333 8.80 0.00 30.94 3.01
5460 29930 5.124936 CGAGGGATAACACGGTATGATATCA 59.875 44.000 8.10 8.10 42.25 2.15
5471 29942 1.143183 CCACCCGAGGGATAACACG 59.857 63.158 16.26 0.00 38.96 4.49
5487 29958 2.114411 GTTTCTTCCCCCACGCCA 59.886 61.111 0.00 0.00 0.00 5.69
5498 29969 1.611977 GCAGCGGTTTTAGGGTTTCTT 59.388 47.619 0.00 0.00 0.00 2.52
5565 30036 2.131776 AACGACCAACAGGGAAACAA 57.868 45.000 0.00 0.00 41.15 2.83
5598 30069 0.767375 AGCTTCCCCATATGCATCGT 59.233 50.000 0.19 0.00 0.00 3.73
5605 30076 0.179018 GCACCGAAGCTTCCCCATAT 60.179 55.000 20.62 0.00 0.00 1.78
5610 30081 4.699522 ACCGCACCGAAGCTTCCC 62.700 66.667 20.62 6.01 0.00 3.97
5620 30091 4.643387 AACTCAGGCCACCGCACC 62.643 66.667 5.01 0.00 36.38 5.01
5624 30095 1.961277 GTCACAACTCAGGCCACCG 60.961 63.158 5.01 0.00 0.00 4.94
5631 30102 1.270305 ACATCGGGTGTCACAACTCAG 60.270 52.381 5.12 0.00 35.77 3.35
5643 30114 2.646175 CCACTCCACGACATCGGGT 61.646 63.158 6.21 0.00 42.08 5.28
5645 30116 1.139734 CTCCACTCCACGACATCGG 59.860 63.158 6.21 0.00 44.95 4.18
5647 30118 0.108615 CACCTCCACTCCACGACATC 60.109 60.000 0.00 0.00 0.00 3.06
5649 30120 2.867855 GCACCTCCACTCCACGACA 61.868 63.158 0.00 0.00 0.00 4.35
5653 30124 2.032681 GGTGCACCTCCACTCCAC 59.967 66.667 29.12 0.00 36.03 4.02
5654 30125 2.122413 AGGTGCACCTCCACTCCA 60.122 61.111 33.20 0.00 44.77 3.86
5673 30144 2.032681 GAACAAGGACGCAGCCCT 59.967 61.111 0.00 0.00 35.03 5.19
5676 30147 2.558313 GCTGAACAAGGACGCAGC 59.442 61.111 0.00 0.00 45.64 5.25
5677 30148 0.320247 AGAGCTGAACAAGGACGCAG 60.320 55.000 0.00 0.00 0.00 5.18
5680 30151 0.734253 CCGAGAGCTGAACAAGGACG 60.734 60.000 0.00 0.00 0.00 4.79
5686 30157 1.602605 TCGACCCGAGAGCTGAACA 60.603 57.895 0.00 0.00 0.00 3.18
5708 30179 3.582120 ACAACCAACAGCACCGCG 61.582 61.111 0.00 0.00 0.00 6.46
5710 30181 2.026014 GCACAACCAACAGCACCG 59.974 61.111 0.00 0.00 0.00 4.94
5715 30186 1.507141 GGTCGGAGCACAACCAACAG 61.507 60.000 1.64 0.00 33.11 3.16
5719 30190 2.425592 CTGGTCGGAGCACAACCA 59.574 61.111 5.66 7.28 40.70 3.67
5743 30214 3.518303 CCATCATCAGATATGGAGCTCCA 59.482 47.826 36.73 36.73 44.62 3.86
5762 30242 0.116940 ACATCCCAAAAGCACCCCAT 59.883 50.000 0.00 0.00 0.00 4.00
5772 30252 1.606994 CCGTCGAGACAACATCCCAAA 60.607 52.381 4.02 0.00 0.00 3.28
5773 30253 0.037697 CCGTCGAGACAACATCCCAA 60.038 55.000 4.02 0.00 0.00 4.12
5775 30255 0.813184 TACCGTCGAGACAACATCCC 59.187 55.000 4.02 0.00 0.00 3.85
5777 30257 1.471684 ACCTACCGTCGAGACAACATC 59.528 52.381 4.02 0.00 0.00 3.06
5778 30258 1.201647 CACCTACCGTCGAGACAACAT 59.798 52.381 4.02 0.00 0.00 2.71
5779 30259 0.594602 CACCTACCGTCGAGACAACA 59.405 55.000 4.02 0.00 0.00 3.33
5780 30260 0.595095 ACACCTACCGTCGAGACAAC 59.405 55.000 4.02 0.00 0.00 3.32
5782 30262 1.859427 GCACACCTACCGTCGAGACA 61.859 60.000 4.02 0.00 0.00 3.41
5784 30264 1.601477 TGCACACCTACCGTCGAGA 60.601 57.895 0.00 0.00 0.00 4.04
5785 30265 1.443872 GTGCACACCTACCGTCGAG 60.444 63.158 13.17 0.00 0.00 4.04
5786 30266 1.457823 AAGTGCACACCTACCGTCGA 61.458 55.000 21.04 0.00 0.00 4.20
5787 30267 0.599204 AAAGTGCACACCTACCGTCG 60.599 55.000 21.04 0.00 0.00 5.12
5791 30271 1.429463 CGAGAAAGTGCACACCTACC 58.571 55.000 21.04 2.43 0.00 3.18
5792 30272 0.790814 GCGAGAAAGTGCACACCTAC 59.209 55.000 21.04 6.46 0.00 3.18
5793 30273 0.320421 GGCGAGAAAGTGCACACCTA 60.320 55.000 21.04 0.00 0.00 3.08
5794 30274 1.598130 GGCGAGAAAGTGCACACCT 60.598 57.895 21.04 12.35 0.00 4.00
5795 30275 2.946762 GGCGAGAAAGTGCACACC 59.053 61.111 21.04 7.33 0.00 4.16
5796 30276 1.772063 AACGGCGAGAAAGTGCACAC 61.772 55.000 21.04 10.00 0.00 3.82
5797 30277 0.249531 TAACGGCGAGAAAGTGCACA 60.250 50.000 21.04 0.00 0.00 4.57
5801 30281 2.222508 CGACATTAACGGCGAGAAAGTG 60.223 50.000 16.62 7.05 0.00 3.16
5802 30282 1.990563 CGACATTAACGGCGAGAAAGT 59.009 47.619 16.62 10.04 0.00 2.66
5803 30283 1.323534 CCGACATTAACGGCGAGAAAG 59.676 52.381 16.62 6.56 43.74 2.62
5804 30284 1.352114 CCGACATTAACGGCGAGAAA 58.648 50.000 16.62 4.69 43.74 2.52
5812 30292 0.108329 ACCAGCTCCCGACATTAACG 60.108 55.000 0.00 0.00 0.00 3.18
5813 30293 1.066430 TCACCAGCTCCCGACATTAAC 60.066 52.381 0.00 0.00 0.00 2.01
5816 30296 0.107508 CATCACCAGCTCCCGACATT 60.108 55.000 0.00 0.00 0.00 2.71
5817 30297 1.524002 CATCACCAGCTCCCGACAT 59.476 57.895 0.00 0.00 0.00 3.06
5823 30491 0.912486 ACCTTACCATCACCAGCTCC 59.088 55.000 0.00 0.00 0.00 4.70
5829 30497 1.065418 CACCCTCACCTTACCATCACC 60.065 57.143 0.00 0.00 0.00 4.02
5841 30509 1.004918 CCGAAGACACCACCCTCAC 60.005 63.158 0.00 0.00 0.00 3.51
5850 30518 1.301479 GACCCACCACCGAAGACAC 60.301 63.158 0.00 0.00 0.00 3.67
5863 30531 4.278513 CAGCCCCAAACGGACCCA 62.279 66.667 0.00 0.00 0.00 4.51
5865 30533 2.671963 GTCAGCCCCAAACGGACC 60.672 66.667 0.00 0.00 0.00 4.46
5867 30535 2.075355 AATGGTCAGCCCCAAACGGA 62.075 55.000 0.00 0.00 38.20 4.69
5870 30538 0.831711 ACCAATGGTCAGCCCCAAAC 60.832 55.000 0.00 0.00 38.20 2.93
5879 30547 2.687425 CAACACTGACAACCAATGGTCA 59.313 45.455 4.95 0.00 41.44 4.02
5893 30561 0.037975 GCTCCAAATGCCCAACACTG 60.038 55.000 0.00 0.00 0.00 3.66
5905 30573 0.675083 CATGCCAAGTGTGCTCCAAA 59.325 50.000 0.00 0.00 0.00 3.28
5909 30577 0.457853 CATGCATGCCAAGTGTGCTC 60.458 55.000 14.93 0.00 39.52 4.26
5920 30588 1.257936 CGTCTAACGGTACATGCATGC 59.742 52.381 26.53 11.82 38.08 4.06
5931 30599 1.560923 CAGCCTGATTCGTCTAACGG 58.439 55.000 0.00 0.00 42.81 4.44
5933 30601 1.291132 GCCAGCCTGATTCGTCTAAC 58.709 55.000 0.00 0.00 0.00 2.34
5948 30616 1.298014 GTCTTGAGAGGGTGGCCAG 59.702 63.158 5.11 0.00 0.00 4.85
5954 30622 0.900647 CACTCCGGTCTTGAGAGGGT 60.901 60.000 0.00 0.00 33.95 4.34
5974 30642 3.245016 ACCTCCACAATCATGACATGTGT 60.245 43.478 28.27 15.97 42.17 3.72
5977 30645 3.882444 AGACCTCCACAATCATGACATG 58.118 45.455 9.28 9.28 0.00 3.21
5981 30649 3.307691 GGACAAGACCTCCACAATCATGA 60.308 47.826 0.00 0.00 0.00 3.07
6017 30736 0.868406 CAACTTCACCGAAGAGCACC 59.132 55.000 10.58 0.00 41.71 5.01
6039 30758 2.033662 GCTCATAGACCGACGATTTTGC 60.034 50.000 0.00 0.00 0.00 3.68
6044 30769 1.270826 CCATGCTCATAGACCGACGAT 59.729 52.381 0.00 0.00 0.00 3.73
6046 30771 0.385751 ACCATGCTCATAGACCGACG 59.614 55.000 0.00 0.00 0.00 5.12
6056 30781 2.118233 TACACCGCCAACCATGCTCA 62.118 55.000 0.00 0.00 0.00 4.26
6091 30816 9.939802 TTTTTACCCTACTGTTTTTGCTAAAAA 57.060 25.926 7.64 5.35 37.99 1.94
6092 30817 9.368674 GTTTTTACCCTACTGTTTTTGCTAAAA 57.631 29.630 1.76 1.76 0.00 1.52
6093 30818 7.980662 GGTTTTTACCCTACTGTTTTTGCTAAA 59.019 33.333 0.00 0.00 0.00 1.85
6094 30819 7.417683 GGGTTTTTACCCTACTGTTTTTGCTAA 60.418 37.037 6.11 0.00 46.39 3.09
6095 30820 6.040729 GGGTTTTTACCCTACTGTTTTTGCTA 59.959 38.462 6.11 0.00 46.39 3.49
6096 30821 5.163385 GGGTTTTTACCCTACTGTTTTTGCT 60.163 40.000 6.11 0.00 46.39 3.91
6097 30822 5.051816 GGGTTTTTACCCTACTGTTTTTGC 58.948 41.667 6.11 0.00 46.39 3.68
6120 30845 4.103357 GCGTCATTGTACACCTACTGTAG 58.897 47.826 7.87 7.87 35.93 2.74
6121 30846 3.119388 GGCGTCATTGTACACCTACTGTA 60.119 47.826 0.00 0.00 33.91 2.74
6122 30847 2.353406 GGCGTCATTGTACACCTACTGT 60.353 50.000 0.00 0.00 36.82 3.55
6123 30848 2.094182 AGGCGTCATTGTACACCTACTG 60.094 50.000 0.00 0.00 30.06 2.74
6124 30849 2.165845 GAGGCGTCATTGTACACCTACT 59.834 50.000 0.00 0.00 32.03 2.57
6125 30850 2.165845 AGAGGCGTCATTGTACACCTAC 59.834 50.000 9.41 0.00 32.03 3.18
6126 30851 2.453521 AGAGGCGTCATTGTACACCTA 58.546 47.619 9.41 0.00 32.03 3.08
6127 30852 1.267121 AGAGGCGTCATTGTACACCT 58.733 50.000 9.41 0.00 34.59 4.00
6128 30853 2.094762 AAGAGGCGTCATTGTACACC 57.905 50.000 9.41 0.00 0.00 4.16
6129 30854 5.600908 TTAAAAGAGGCGTCATTGTACAC 57.399 39.130 9.41 0.00 0.00 2.90
6130 30855 5.123186 CCATTAAAAGAGGCGTCATTGTACA 59.877 40.000 9.41 0.00 0.00 2.90
6131 30856 5.123344 ACCATTAAAAGAGGCGTCATTGTAC 59.877 40.000 9.41 0.00 0.00 2.90
6132 30857 5.250200 ACCATTAAAAGAGGCGTCATTGTA 58.750 37.500 9.41 0.00 0.00 2.41
6133 30858 4.079253 ACCATTAAAAGAGGCGTCATTGT 58.921 39.130 9.41 0.00 0.00 2.71
6134 30859 4.701956 ACCATTAAAAGAGGCGTCATTG 57.298 40.909 9.41 0.00 0.00 2.82
6135 30860 8.514330 TTATTACCATTAAAAGAGGCGTCATT 57.486 30.769 9.41 0.00 0.00 2.57
6153 30878 8.194104 TGCCAACAATGTGTTATCATTATTACC 58.806 33.333 0.00 0.00 38.77 2.85
6154 30879 9.236691 CTGCCAACAATGTGTTATCATTATTAC 57.763 33.333 0.00 0.00 38.77 1.89
6155 30880 9.183368 TCTGCCAACAATGTGTTATCATTATTA 57.817 29.630 0.00 0.00 38.77 0.98
6156 30881 8.065473 TCTGCCAACAATGTGTTATCATTATT 57.935 30.769 0.00 0.00 38.77 1.40
6157 30882 7.643569 TCTGCCAACAATGTGTTATCATTAT 57.356 32.000 0.00 0.00 38.77 1.28
6158 30883 7.459795 TTCTGCCAACAATGTGTTATCATTA 57.540 32.000 0.00 0.00 38.77 1.90
6159 30884 5.981088 TCTGCCAACAATGTGTTATCATT 57.019 34.783 0.00 0.00 38.77 2.57
6160 30885 5.981088 TTCTGCCAACAATGTGTTATCAT 57.019 34.783 0.00 0.00 38.77 2.45
6161 30886 5.981088 ATTCTGCCAACAATGTGTTATCA 57.019 34.783 0.00 0.00 38.77 2.15
6162 30887 7.436080 CCATTATTCTGCCAACAATGTGTTATC 59.564 37.037 0.00 0.00 38.77 1.75
6163 30888 7.093377 ACCATTATTCTGCCAACAATGTGTTAT 60.093 33.333 0.00 0.00 38.77 1.89
6164 30889 6.210385 ACCATTATTCTGCCAACAATGTGTTA 59.790 34.615 0.00 0.00 38.77 2.41
6165 30890 5.011943 ACCATTATTCTGCCAACAATGTGTT 59.988 36.000 0.00 0.00 42.08 3.32
6166 30891 4.527816 ACCATTATTCTGCCAACAATGTGT 59.472 37.500 0.00 0.00 0.00 3.72
6167 30892 5.075858 ACCATTATTCTGCCAACAATGTG 57.924 39.130 0.00 0.00 0.00 3.21
6168 30893 7.267128 CAATACCATTATTCTGCCAACAATGT 58.733 34.615 0.00 0.00 0.00 2.71
6169 30894 6.702723 CCAATACCATTATTCTGCCAACAATG 59.297 38.462 0.00 0.00 0.00 2.82
6170 30895 6.610830 TCCAATACCATTATTCTGCCAACAAT 59.389 34.615 0.00 0.00 0.00 2.71
6171 30896 5.954752 TCCAATACCATTATTCTGCCAACAA 59.045 36.000 0.00 0.00 0.00 2.83
6172 30897 5.514169 TCCAATACCATTATTCTGCCAACA 58.486 37.500 0.00 0.00 0.00 3.33
6173 30898 6.655078 ATCCAATACCATTATTCTGCCAAC 57.345 37.500 0.00 0.00 0.00 3.77
6174 30899 7.754624 TCTATCCAATACCATTATTCTGCCAA 58.245 34.615 0.00 0.00 0.00 4.52
6175 30900 7.328404 TCTATCCAATACCATTATTCTGCCA 57.672 36.000 0.00 0.00 0.00 4.92
6176 30901 7.500559 GGATCTATCCAATACCATTATTCTGCC 59.499 40.741 4.04 0.00 46.38 4.85
6177 30902 8.443953 GGATCTATCCAATACCATTATTCTGC 57.556 38.462 4.04 0.00 46.38 4.26
6209 30934 9.692749 GGTGACGATTAAATCTCATAGTAATCA 57.307 33.333 0.00 0.00 34.16 2.57
6210 30935 9.141400 GGGTGACGATTAAATCTCATAGTAATC 57.859 37.037 0.00 0.00 32.15 1.75
6211 30936 8.871125 AGGGTGACGATTAAATCTCATAGTAAT 58.129 33.333 0.00 0.00 0.00 1.89
6212 30937 8.141909 CAGGGTGACGATTAAATCTCATAGTAA 58.858 37.037 0.00 0.00 0.00 2.24
6213 30938 7.287005 ACAGGGTGACGATTAAATCTCATAGTA 59.713 37.037 0.00 0.00 0.00 1.82
6214 30939 6.098409 ACAGGGTGACGATTAAATCTCATAGT 59.902 38.462 0.00 0.00 0.00 2.12
6215 30940 6.516718 ACAGGGTGACGATTAAATCTCATAG 58.483 40.000 0.00 0.00 0.00 2.23
6216 30941 6.479972 ACAGGGTGACGATTAAATCTCATA 57.520 37.500 0.00 0.00 0.00 2.15
6217 30942 5.359194 ACAGGGTGACGATTAAATCTCAT 57.641 39.130 0.00 0.00 0.00 2.90
6218 30943 4.819105 ACAGGGTGACGATTAAATCTCA 57.181 40.909 0.00 0.00 0.00 3.27
6219 30944 4.935808 ACAACAGGGTGACGATTAAATCTC 59.064 41.667 0.00 0.00 0.00 2.75
6220 30945 4.906618 ACAACAGGGTGACGATTAAATCT 58.093 39.130 0.00 0.00 0.00 2.40
6221 30946 5.180492 TCAACAACAGGGTGACGATTAAATC 59.820 40.000 0.00 0.00 0.00 2.17
6222 30947 5.067273 TCAACAACAGGGTGACGATTAAAT 58.933 37.500 0.00 0.00 0.00 1.40
6223 30948 4.452825 TCAACAACAGGGTGACGATTAAA 58.547 39.130 0.00 0.00 0.00 1.52
6224 30949 4.074627 TCAACAACAGGGTGACGATTAA 57.925 40.909 0.00 0.00 0.00 1.40
6225 30950 3.755112 TCAACAACAGGGTGACGATTA 57.245 42.857 0.00 0.00 0.00 1.75
6226 30951 2.631160 TCAACAACAGGGTGACGATT 57.369 45.000 0.00 0.00 0.00 3.34
6227 30952 2.859165 ATCAACAACAGGGTGACGAT 57.141 45.000 0.00 0.00 0.00 3.73
6228 30953 3.973206 ATATCAACAACAGGGTGACGA 57.027 42.857 0.00 0.00 0.00 4.20
6229 30954 5.049060 TGAAAATATCAACAACAGGGTGACG 60.049 40.000 0.00 0.00 34.30 4.35
6230 30955 6.325919 TGAAAATATCAACAACAGGGTGAC 57.674 37.500 0.00 0.00 34.30 3.67
6231 30956 8.821686 ATATGAAAATATCAACAACAGGGTGA 57.178 30.769 0.00 0.00 42.54 4.02
6268 30993 6.978338 TCATGGTCTAAGGACGTGATTATAC 58.022 40.000 0.00 0.00 42.97 1.47
6269 30994 7.002276 TCTCATGGTCTAAGGACGTGATTATA 58.998 38.462 0.00 0.00 42.97 0.98
6270 30995 5.833667 TCTCATGGTCTAAGGACGTGATTAT 59.166 40.000 0.00 0.00 42.97 1.28
6271 30996 5.198207 TCTCATGGTCTAAGGACGTGATTA 58.802 41.667 0.00 0.00 42.97 1.75
6272 30997 4.023980 TCTCATGGTCTAAGGACGTGATT 58.976 43.478 0.00 0.00 42.97 2.57
6273 30998 3.632333 TCTCATGGTCTAAGGACGTGAT 58.368 45.455 0.00 0.00 42.97 3.06
6274 30999 3.081710 TCTCATGGTCTAAGGACGTGA 57.918 47.619 0.00 0.00 42.97 4.35
6275 31000 3.868757 TTCTCATGGTCTAAGGACGTG 57.131 47.619 0.00 0.00 42.97 4.49
6276 31001 6.098409 ACAATATTCTCATGGTCTAAGGACGT 59.902 38.462 0.00 0.00 42.97 4.34
6277 31002 6.422100 CACAATATTCTCATGGTCTAAGGACG 59.578 42.308 0.00 0.00 42.97 4.79
6278 31003 6.708054 CCACAATATTCTCATGGTCTAAGGAC 59.292 42.308 0.00 0.00 41.43 3.85
6279 31004 6.615316 TCCACAATATTCTCATGGTCTAAGGA 59.385 38.462 0.00 0.00 0.00 3.36
6280 31005 6.708054 GTCCACAATATTCTCATGGTCTAAGG 59.292 42.308 0.00 0.00 0.00 2.69
6281 31006 6.708054 GGTCCACAATATTCTCATGGTCTAAG 59.292 42.308 0.00 0.00 0.00 2.18
6282 31007 6.386927 AGGTCCACAATATTCTCATGGTCTAA 59.613 38.462 0.00 0.00 0.00 2.10
6283 31008 5.905331 AGGTCCACAATATTCTCATGGTCTA 59.095 40.000 0.00 0.00 0.00 2.59
6284 31009 4.723789 AGGTCCACAATATTCTCATGGTCT 59.276 41.667 0.00 2.98 0.00 3.85
6285 31010 5.041191 AGGTCCACAATATTCTCATGGTC 57.959 43.478 0.00 1.15 0.00 4.02
6286 31011 5.044919 TGAAGGTCCACAATATTCTCATGGT 60.045 40.000 0.00 0.00 0.00 3.55
6287 31012 5.439721 TGAAGGTCCACAATATTCTCATGG 58.560 41.667 0.00 0.00 0.00 3.66
6288 31013 7.173907 GGTATGAAGGTCCACAATATTCTCATG 59.826 40.741 0.00 0.00 0.00 3.07
6289 31014 7.227156 GGTATGAAGGTCCACAATATTCTCAT 58.773 38.462 0.00 0.00 0.00 2.90
6290 31015 6.591935 GGTATGAAGGTCCACAATATTCTCA 58.408 40.000 0.00 0.00 0.00 3.27
6291 31016 5.696724 CGGTATGAAGGTCCACAATATTCTC 59.303 44.000 0.00 0.00 0.00 2.87
6292 31017 5.365605 TCGGTATGAAGGTCCACAATATTCT 59.634 40.000 0.00 0.00 0.00 2.40
6293 31018 5.607477 TCGGTATGAAGGTCCACAATATTC 58.393 41.667 0.00 0.00 0.00 1.75
6294 31019 5.623956 TCGGTATGAAGGTCCACAATATT 57.376 39.130 0.00 0.00 0.00 1.28
6295 31020 5.365619 GTTCGGTATGAAGGTCCACAATAT 58.634 41.667 0.00 0.00 37.23 1.28
6296 31021 4.678574 CGTTCGGTATGAAGGTCCACAATA 60.679 45.833 0.00 0.00 37.23 1.90
6297 31022 3.606687 GTTCGGTATGAAGGTCCACAAT 58.393 45.455 0.00 0.00 37.23 2.71
6298 31023 2.610976 CGTTCGGTATGAAGGTCCACAA 60.611 50.000 0.00 0.00 37.23 3.33
6299 31024 1.067425 CGTTCGGTATGAAGGTCCACA 60.067 52.381 0.00 0.00 37.23 4.17
6300 31025 1.636988 CGTTCGGTATGAAGGTCCAC 58.363 55.000 0.00 0.00 37.23 4.02
6301 31026 0.533491 CCGTTCGGTATGAAGGTCCA 59.467 55.000 2.82 0.00 40.12 4.02
6302 31027 0.533951 ACCGTTCGGTATGAAGGTCC 59.466 55.000 15.43 0.00 40.12 4.46
6303 31028 2.375173 AACCGTTCGGTATGAAGGTC 57.625 50.000 17.21 0.00 40.12 3.85
6304 31029 2.827921 AGTAACCGTTCGGTATGAAGGT 59.172 45.455 17.21 2.76 40.12 3.50
6305 31030 3.515330 AGTAACCGTTCGGTATGAAGG 57.485 47.619 17.21 0.00 41.14 3.46
6306 31031 4.092383 CCAAAGTAACCGTTCGGTATGAAG 59.908 45.833 17.21 6.51 37.23 3.02
6307 31032 3.995705 CCAAAGTAACCGTTCGGTATGAA 59.004 43.478 17.21 1.48 37.57 2.57
6308 31033 3.587923 CCAAAGTAACCGTTCGGTATGA 58.412 45.455 17.21 3.65 37.57 2.15
6309 31034 2.674357 CCCAAAGTAACCGTTCGGTATG 59.326 50.000 17.21 10.89 37.57 2.39
6310 31035 2.355007 CCCCAAAGTAACCGTTCGGTAT 60.355 50.000 17.21 10.05 37.57 2.73
6311 31036 1.001860 CCCCAAAGTAACCGTTCGGTA 59.998 52.381 17.21 3.76 37.57 4.02
6312 31037 0.250424 CCCCAAAGTAACCGTTCGGT 60.250 55.000 11.27 11.27 40.78 4.69
6313 31038 0.250424 ACCCCAAAGTAACCGTTCGG 60.250 55.000 9.81 9.81 0.00 4.30
6314 31039 1.596603 AACCCCAAAGTAACCGTTCG 58.403 50.000 0.00 0.00 0.00 3.95
6315 31040 2.294233 GGAAACCCCAAAGTAACCGTTC 59.706 50.000 0.00 0.00 34.14 3.95
6316 31041 2.309613 GGAAACCCCAAAGTAACCGTT 58.690 47.619 0.00 0.00 34.14 4.44
6317 31042 1.214923 TGGAAACCCCAAAGTAACCGT 59.785 47.619 0.00 0.00 43.29 4.83
6318 31043 1.984066 TGGAAACCCCAAAGTAACCG 58.016 50.000 0.00 0.00 43.29 4.44
6327 31052 2.553172 CGAATAACGTTTGGAAACCCCA 59.447 45.455 5.91 0.00 39.17 4.96
6328 31053 3.206034 CGAATAACGTTTGGAAACCCC 57.794 47.619 5.91 0.00 35.51 4.95
6341 31066 8.007716 CGTTATGATCACCCATTTACGAATAAC 58.992 37.037 0.00 0.00 36.43 1.89
6342 31067 7.171848 CCGTTATGATCACCCATTTACGAATAA 59.828 37.037 0.00 0.00 36.43 1.40
6343 31068 6.647481 CCGTTATGATCACCCATTTACGAATA 59.353 38.462 0.00 0.00 36.43 1.75
6344 31069 5.468746 CCGTTATGATCACCCATTTACGAAT 59.531 40.000 0.00 0.00 36.43 3.34
6345 31070 4.812091 CCGTTATGATCACCCATTTACGAA 59.188 41.667 0.00 0.00 36.43 3.85
6346 31071 4.141892 ACCGTTATGATCACCCATTTACGA 60.142 41.667 0.00 0.00 36.43 3.43
6347 31072 4.124238 ACCGTTATGATCACCCATTTACG 58.876 43.478 0.00 0.00 35.28 3.18
6348 31073 6.764560 AGTTACCGTTATGATCACCCATTTAC 59.235 38.462 0.00 0.00 0.00 2.01
6349 31074 6.891388 AGTTACCGTTATGATCACCCATTTA 58.109 36.000 0.00 0.00 0.00 1.40
6350 31075 5.751586 AGTTACCGTTATGATCACCCATTT 58.248 37.500 0.00 0.00 0.00 2.32
6351 31076 5.367945 AGTTACCGTTATGATCACCCATT 57.632 39.130 0.00 0.00 0.00 3.16
6352 31077 5.365619 GAAGTTACCGTTATGATCACCCAT 58.634 41.667 0.00 0.00 0.00 4.00
6353 31078 4.383335 GGAAGTTACCGTTATGATCACCCA 60.383 45.833 0.00 0.00 0.00 4.51
6354 31079 4.124970 GGAAGTTACCGTTATGATCACCC 58.875 47.826 0.00 0.00 0.00 4.61
6355 31080 3.800506 CGGAAGTTACCGTTATGATCACC 59.199 47.826 0.00 0.00 46.70 4.02
6367 31092 2.762327 TCTGATGTACCCGGAAGTTACC 59.238 50.000 0.73 0.00 0.00 2.85
6368 31093 4.460948 TTCTGATGTACCCGGAAGTTAC 57.539 45.455 0.73 0.00 0.00 2.50
6369 31094 5.012354 ACTTTTCTGATGTACCCGGAAGTTA 59.988 40.000 0.73 0.00 31.35 2.24
6370 31095 4.202430 ACTTTTCTGATGTACCCGGAAGTT 60.202 41.667 0.73 0.00 31.35 2.66
6371 31096 3.326880 ACTTTTCTGATGTACCCGGAAGT 59.673 43.478 0.73 0.00 31.35 3.01
6372 31097 3.939066 ACTTTTCTGATGTACCCGGAAG 58.061 45.455 0.73 0.00 31.35 3.46
6373 31098 4.360951 AACTTTTCTGATGTACCCGGAA 57.639 40.909 0.73 3.35 0.00 4.30
6374 31099 4.069304 CAAACTTTTCTGATGTACCCGGA 58.931 43.478 0.73 0.00 0.00 5.14
6375 31100 3.818773 ACAAACTTTTCTGATGTACCCGG 59.181 43.478 0.00 0.00 0.00 5.73
6376 31101 4.513692 TGACAAACTTTTCTGATGTACCCG 59.486 41.667 0.00 0.00 0.00 5.28
6377 31102 5.560183 CGTGACAAACTTTTCTGATGTACCC 60.560 44.000 0.00 0.00 0.00 3.69
6378 31103 5.440685 CGTGACAAACTTTTCTGATGTACC 58.559 41.667 0.00 0.00 0.00 3.34
6379 31104 5.440685 CCGTGACAAACTTTTCTGATGTAC 58.559 41.667 0.00 0.00 0.00 2.90
6380 31105 4.513692 CCCGTGACAAACTTTTCTGATGTA 59.486 41.667 0.00 0.00 0.00 2.29
6381 31106 3.315191 CCCGTGACAAACTTTTCTGATGT 59.685 43.478 0.00 0.00 0.00 3.06
6382 31107 3.563808 TCCCGTGACAAACTTTTCTGATG 59.436 43.478 0.00 0.00 0.00 3.07
6383 31108 3.564225 GTCCCGTGACAAACTTTTCTGAT 59.436 43.478 0.00 0.00 41.37 2.90
6384 31109 2.940410 GTCCCGTGACAAACTTTTCTGA 59.060 45.455 0.00 0.00 41.37 3.27
6385 31110 2.943033 AGTCCCGTGACAAACTTTTCTG 59.057 45.455 0.00 0.00 44.33 3.02
6386 31111 3.203716 GAGTCCCGTGACAAACTTTTCT 58.796 45.455 0.00 0.00 44.33 2.52
6387 31112 2.033151 CGAGTCCCGTGACAAACTTTTC 60.033 50.000 0.00 0.00 44.33 2.29
6388 31113 1.937899 CGAGTCCCGTGACAAACTTTT 59.062 47.619 0.00 0.00 44.33 2.27
6389 31114 1.137479 TCGAGTCCCGTGACAAACTTT 59.863 47.619 0.00 0.00 44.33 2.66
6390 31115 0.748450 TCGAGTCCCGTGACAAACTT 59.252 50.000 0.00 0.00 44.33 2.66
6391 31116 0.966920 ATCGAGTCCCGTGACAAACT 59.033 50.000 0.00 0.00 44.33 2.66
6392 31117 2.094854 ACTATCGAGTCCCGTGACAAAC 60.095 50.000 0.00 0.00 44.33 2.93
6393 31118 2.165167 ACTATCGAGTCCCGTGACAAA 58.835 47.619 0.00 0.00 44.33 2.83
6394 31119 1.830279 ACTATCGAGTCCCGTGACAA 58.170 50.000 0.00 0.00 44.33 3.18
6395 31120 2.283298 GTACTATCGAGTCCCGTGACA 58.717 52.381 0.00 0.00 44.33 3.58
6396 31121 2.283298 TGTACTATCGAGTCCCGTGAC 58.717 52.381 0.00 0.00 42.09 3.67
6397 31122 2.696989 TGTACTATCGAGTCCCGTGA 57.303 50.000 0.00 0.00 37.10 4.35
6398 31123 2.941064 TCTTGTACTATCGAGTCCCGTG 59.059 50.000 0.00 0.00 37.10 4.94
6399 31124 2.941720 GTCTTGTACTATCGAGTCCCGT 59.058 50.000 0.00 0.00 37.10 5.28
6400 31125 3.002451 CAGTCTTGTACTATCGAGTCCCG 59.998 52.174 0.00 0.00 35.76 5.14
6401 31126 3.315749 CCAGTCTTGTACTATCGAGTCCC 59.684 52.174 0.00 0.00 35.76 4.46
6402 31127 4.197750 TCCAGTCTTGTACTATCGAGTCC 58.802 47.826 0.00 0.00 35.76 3.85
6403 31128 5.814764 TTCCAGTCTTGTACTATCGAGTC 57.185 43.478 0.00 0.00 35.76 3.36
6404 31129 6.777213 AATTCCAGTCTTGTACTATCGAGT 57.223 37.500 0.00 0.00 35.76 4.18
6405 31130 6.019479 GCAAATTCCAGTCTTGTACTATCGAG 60.019 42.308 0.00 0.00 35.76 4.04
6406 31131 5.810587 GCAAATTCCAGTCTTGTACTATCGA 59.189 40.000 0.00 0.00 35.76 3.59
6407 31132 5.812642 AGCAAATTCCAGTCTTGTACTATCG 59.187 40.000 0.00 0.00 35.76 2.92
6408 31133 7.550906 AGAAGCAAATTCCAGTCTTGTACTATC 59.449 37.037 0.00 0.00 38.84 2.08
6409 31134 7.398024 AGAAGCAAATTCCAGTCTTGTACTAT 58.602 34.615 0.00 0.00 38.84 2.12
6410 31135 6.769512 AGAAGCAAATTCCAGTCTTGTACTA 58.230 36.000 0.00 0.00 38.84 1.82
6411 31136 5.625150 AGAAGCAAATTCCAGTCTTGTACT 58.375 37.500 0.00 0.00 38.84 2.73
6412 31137 5.932661 GAGAAGCAAATTCCAGTCTTGTAC 58.067 41.667 0.00 0.00 38.84 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.