Multiple sequence alignment - TraesCS5D01G253900
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5D01G253900 | chr5D | 100.000 | 5530 | 0 | 0 | 1 | 5530 | 360744709 | 360750238 | 0.000000e+00 | 10213.0 |
1 | TraesCS5D01G253900 | chr5D | 95.364 | 151 | 1 | 1 | 2595 | 2739 | 72499039 | 72498889 | 9.260000e-58 | 235.0 |
2 | TraesCS5D01G253900 | chr5A | 93.982 | 1861 | 85 | 11 | 759 | 2596 | 461516825 | 461518681 | 0.000000e+00 | 2791.0 |
3 | TraesCS5D01G253900 | chr5A | 93.245 | 755 | 45 | 4 | 3686 | 4436 | 461519638 | 461520390 | 0.000000e+00 | 1107.0 |
4 | TraesCS5D01G253900 | chr5A | 93.985 | 665 | 34 | 1 | 3049 | 3707 | 461518949 | 461519613 | 0.000000e+00 | 1002.0 |
5 | TraesCS5D01G253900 | chr5A | 88.732 | 852 | 51 | 25 | 4433 | 5272 | 461520482 | 461521300 | 0.000000e+00 | 1000.0 |
6 | TraesCS5D01G253900 | chr5A | 96.167 | 287 | 11 | 0 | 2735 | 3021 | 461518678 | 461518964 | 2.330000e-128 | 470.0 |
7 | TraesCS5D01G253900 | chr5A | 97.605 | 167 | 4 | 0 | 5364 | 5530 | 461522511 | 461522677 | 2.520000e-73 | 287.0 |
8 | TraesCS5D01G253900 | chr5B | 93.938 | 1864 | 70 | 20 | 773 | 2596 | 426063499 | 426065359 | 0.000000e+00 | 2776.0 |
9 | TraesCS5D01G253900 | chr5B | 93.073 | 1718 | 90 | 15 | 3049 | 4751 | 426065627 | 426067330 | 0.000000e+00 | 2486.0 |
10 | TraesCS5D01G253900 | chr5B | 91.753 | 485 | 17 | 7 | 5068 | 5530 | 426086506 | 426086989 | 0.000000e+00 | 652.0 |
11 | TraesCS5D01G253900 | chr5B | 95.122 | 287 | 14 | 0 | 2735 | 3021 | 426065356 | 426065642 | 2.350000e-123 | 453.0 |
12 | TraesCS5D01G253900 | chr5B | 91.262 | 103 | 7 | 2 | 773 | 874 | 426059043 | 426059144 | 7.470000e-29 | 139.0 |
13 | TraesCS5D01G253900 | chr5B | 91.262 | 103 | 7 | 2 | 773 | 874 | 426061271 | 426061372 | 7.470000e-29 | 139.0 |
14 | TraesCS5D01G253900 | chr5B | 90.385 | 104 | 7 | 3 | 773 | 874 | 426056815 | 426056917 | 3.480000e-27 | 134.0 |
15 | TraesCS5D01G253900 | chr5B | 91.176 | 68 | 2 | 3 | 5009 | 5075 | 426071524 | 426071588 | 7.630000e-14 | 89.8 |
16 | TraesCS5D01G253900 | chr3D | 95.958 | 767 | 26 | 5 | 1 | 765 | 214958973 | 214959736 | 0.000000e+00 | 1240.0 |
17 | TraesCS5D01G253900 | chr7D | 95.573 | 768 | 30 | 4 | 1 | 768 | 151540380 | 151541143 | 0.000000e+00 | 1227.0 |
18 | TraesCS5D01G253900 | chr7D | 95.784 | 759 | 29 | 3 | 1 | 757 | 114467582 | 114468339 | 0.000000e+00 | 1221.0 |
19 | TraesCS5D01G253900 | chr3A | 95.789 | 760 | 28 | 3 | 1 | 757 | 660861541 | 660860783 | 0.000000e+00 | 1223.0 |
20 | TraesCS5D01G253900 | chr3A | 94.667 | 150 | 8 | 0 | 2592 | 2741 | 41614328 | 41614477 | 3.330000e-57 | 233.0 |
21 | TraesCS5D01G253900 | chr2D | 95.646 | 758 | 31 | 2 | 1 | 757 | 161897749 | 161898505 | 0.000000e+00 | 1216.0 |
22 | TraesCS5D01G253900 | chr2D | 95.263 | 760 | 32 | 2 | 1 | 757 | 101660125 | 101660883 | 0.000000e+00 | 1201.0 |
23 | TraesCS5D01G253900 | chr2D | 95.257 | 759 | 32 | 4 | 1 | 757 | 70391190 | 70391946 | 0.000000e+00 | 1199.0 |
24 | TraesCS5D01G253900 | chr6D | 95.526 | 760 | 30 | 2 | 1 | 757 | 464214456 | 464213698 | 0.000000e+00 | 1212.0 |
25 | TraesCS5D01G253900 | chr6D | 95.509 | 757 | 33 | 1 | 1 | 757 | 232765171 | 232765926 | 0.000000e+00 | 1208.0 |
26 | TraesCS5D01G253900 | chr6D | 93.750 | 144 | 9 | 0 | 2592 | 2735 | 467805931 | 467806074 | 3.350000e-52 | 217.0 |
27 | TraesCS5D01G253900 | chr1D | 99.310 | 145 | 1 | 0 | 2593 | 2737 | 334233674 | 334233818 | 4.250000e-66 | 263.0 |
28 | TraesCS5D01G253900 | chr3B | 94.737 | 152 | 6 | 2 | 2587 | 2737 | 616891553 | 616891703 | 9.260000e-58 | 235.0 |
29 | TraesCS5D01G253900 | chr7B | 93.750 | 144 | 9 | 0 | 2592 | 2735 | 640260781 | 640260924 | 3.350000e-52 | 217.0 |
30 | TraesCS5D01G253900 | chr4A | 93.243 | 148 | 9 | 1 | 2596 | 2742 | 623949299 | 623949152 | 3.350000e-52 | 217.0 |
31 | TraesCS5D01G253900 | chr1B | 94.326 | 141 | 8 | 0 | 2595 | 2735 | 27237906 | 27238046 | 3.350000e-52 | 217.0 |
32 | TraesCS5D01G253900 | chr2A | 93.103 | 145 | 10 | 0 | 2595 | 2739 | 50059014 | 50059158 | 4.340000e-51 | 213.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5D01G253900 | chr5D | 360744709 | 360750238 | 5529 | False | 10213.000000 | 10213 | 100.000000 | 1 | 5530 | 1 | chr5D.!!$F1 | 5529 |
1 | TraesCS5D01G253900 | chr5A | 461516825 | 461522677 | 5852 | False | 1109.500000 | 2791 | 93.952667 | 759 | 5530 | 6 | chr5A.!!$F1 | 4771 |
2 | TraesCS5D01G253900 | chr5B | 426056815 | 426067330 | 10515 | False | 1021.166667 | 2776 | 92.507000 | 773 | 4751 | 6 | chr5B.!!$F3 | 3978 |
3 | TraesCS5D01G253900 | chr3D | 214958973 | 214959736 | 763 | False | 1240.000000 | 1240 | 95.958000 | 1 | 765 | 1 | chr3D.!!$F1 | 764 |
4 | TraesCS5D01G253900 | chr7D | 151540380 | 151541143 | 763 | False | 1227.000000 | 1227 | 95.573000 | 1 | 768 | 1 | chr7D.!!$F2 | 767 |
5 | TraesCS5D01G253900 | chr7D | 114467582 | 114468339 | 757 | False | 1221.000000 | 1221 | 95.784000 | 1 | 757 | 1 | chr7D.!!$F1 | 756 |
6 | TraesCS5D01G253900 | chr3A | 660860783 | 660861541 | 758 | True | 1223.000000 | 1223 | 95.789000 | 1 | 757 | 1 | chr3A.!!$R1 | 756 |
7 | TraesCS5D01G253900 | chr2D | 161897749 | 161898505 | 756 | False | 1216.000000 | 1216 | 95.646000 | 1 | 757 | 1 | chr2D.!!$F3 | 756 |
8 | TraesCS5D01G253900 | chr2D | 101660125 | 101660883 | 758 | False | 1201.000000 | 1201 | 95.263000 | 1 | 757 | 1 | chr2D.!!$F2 | 756 |
9 | TraesCS5D01G253900 | chr2D | 70391190 | 70391946 | 756 | False | 1199.000000 | 1199 | 95.257000 | 1 | 757 | 1 | chr2D.!!$F1 | 756 |
10 | TraesCS5D01G253900 | chr6D | 464213698 | 464214456 | 758 | True | 1212.000000 | 1212 | 95.526000 | 1 | 757 | 1 | chr6D.!!$R1 | 756 |
11 | TraesCS5D01G253900 | chr6D | 232765171 | 232765926 | 755 | False | 1208.000000 | 1208 | 95.509000 | 1 | 757 | 1 | chr6D.!!$F1 | 756 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
843 | 6759 | 0.033601 | CCCAATCCAATCAACCGGGA | 60.034 | 55.0 | 6.32 | 0.0 | 33.83 | 5.14 | F |
2617 | 8579 | 0.107897 | CGTGTTCGGAATCCATCCCA | 60.108 | 55.0 | 0.00 | 0.0 | 46.39 | 4.37 | F |
2652 | 8614 | 0.035458 | CGGAGTTGGGAAGCTCAGTT | 59.965 | 55.0 | 0.00 | 0.0 | 33.66 | 3.16 | F |
2673 | 8635 | 0.035820 | AGGCCGCTCCGTAAAAATGA | 60.036 | 50.0 | 0.00 | 0.0 | 40.77 | 2.57 | F |
4168 | 10185 | 0.321996 | ACCGGAAGCTCCAGAAGAAC | 59.678 | 55.0 | 9.46 | 0.0 | 35.91 | 3.01 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2633 | 8595 | 0.035458 | AACTGAGCTTCCCAACTCCG | 59.965 | 55.000 | 0.0 | 0.0 | 31.65 | 4.63 | R |
4149 | 10166 | 0.321996 | GTTCTTCTGGAGCTTCCGGT | 59.678 | 55.000 | 0.0 | 0.0 | 43.49 | 5.28 | R |
4176 | 10193 | 1.452108 | ATACCGCCAAGCAAGCTCC | 60.452 | 57.895 | 0.0 | 0.0 | 0.00 | 4.70 | R |
4179 | 10196 | 1.532868 | CTATCATACCGCCAAGCAAGC | 59.467 | 52.381 | 0.0 | 0.0 | 0.00 | 4.01 | R |
5219 | 11354 | 0.178990 | GCCAAACACCTTCACTCCCT | 60.179 | 55.000 | 0.0 | 0.0 | 0.00 | 4.20 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
51 | 52 | 1.073763 | TGCCCTAGTGTGATTGCAAGT | 59.926 | 47.619 | 4.94 | 0.00 | 0.00 | 3.16 |
263 | 269 | 2.087646 | TTGTAGCGCAATATGGCAACA | 58.912 | 42.857 | 11.47 | 0.50 | 41.52 | 3.33 |
264 | 270 | 2.489722 | TTGTAGCGCAATATGGCAACAA | 59.510 | 40.909 | 11.47 | 6.71 | 40.88 | 2.83 |
317 | 323 | 6.054295 | AGTTTTAAAATCATGGCAACTGCAA | 58.946 | 32.000 | 3.52 | 0.00 | 44.36 | 4.08 |
325 | 331 | 2.512692 | TGGCAACTGCAATAGACCAT | 57.487 | 45.000 | 3.76 | 0.00 | 44.36 | 3.55 |
704 | 712 | 1.279271 | GTCCTCTTAGGCACCACACAT | 59.721 | 52.381 | 0.00 | 0.00 | 34.61 | 3.21 |
776 | 784 | 7.858879 | GGCGTCCGACAATTAATACAAATTTAT | 59.141 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
843 | 6759 | 0.033601 | CCCAATCCAATCAACCGGGA | 60.034 | 55.000 | 6.32 | 0.00 | 33.83 | 5.14 |
870 | 6786 | 2.744202 | CGGAAAGAATCAGGTCCTGTTG | 59.256 | 50.000 | 18.65 | 0.00 | 32.61 | 3.33 |
1058 | 6994 | 4.803908 | CCCGCCCAAAGCTCTCCC | 62.804 | 72.222 | 0.00 | 0.00 | 40.39 | 4.30 |
1111 | 7050 | 2.418910 | CGCCTCTCCATGTCGACCT | 61.419 | 63.158 | 14.12 | 0.00 | 0.00 | 3.85 |
1116 | 7055 | 0.395862 | TCTCCATGTCGACCTCCTCC | 60.396 | 60.000 | 14.12 | 0.00 | 0.00 | 4.30 |
1245 | 7187 | 1.079819 | CATGACGAACTGCCTCGGT | 60.080 | 57.895 | 0.00 | 0.00 | 43.22 | 4.69 |
1329 | 7271 | 0.522076 | CGTCGACCTACCTGTTACGC | 60.522 | 60.000 | 10.58 | 0.00 | 0.00 | 4.42 |
1348 | 7290 | 3.816580 | GAGGTTCTCGACAGTTCCC | 57.183 | 57.895 | 0.00 | 0.00 | 0.00 | 3.97 |
1349 | 7291 | 0.109226 | GAGGTTCTCGACAGTTCCCG | 60.109 | 60.000 | 0.00 | 0.00 | 0.00 | 5.14 |
1361 | 7303 | 1.663702 | GTTCCCGTGAGTGACCGTG | 60.664 | 63.158 | 0.00 | 0.00 | 0.00 | 4.94 |
1386 | 7330 | 1.852157 | TTGATGGGCAGGTGAGGGAC | 61.852 | 60.000 | 0.00 | 0.00 | 0.00 | 4.46 |
1495 | 7439 | 1.449353 | CAGGTATGCTCCTCAGCCC | 59.551 | 63.158 | 0.00 | 0.00 | 46.26 | 5.19 |
1511 | 7455 | 4.717877 | TCAGCCCTTACCATCATATGTTG | 58.282 | 43.478 | 1.90 | 4.67 | 0.00 | 3.33 |
1556 | 7500 | 3.055167 | TCAGGTATGCTTCAAGCTTGCTA | 60.055 | 43.478 | 21.99 | 10.88 | 42.97 | 3.49 |
1560 | 7513 | 1.830279 | TGCTTCAAGCTTGCTATGCT | 58.170 | 45.000 | 21.99 | 0.00 | 42.97 | 3.79 |
1695 | 7649 | 8.743085 | AAGCATTTGTTCATAGTCATGTCTAT | 57.257 | 30.769 | 6.65 | 6.65 | 33.57 | 1.98 |
1880 | 7834 | 1.480545 | ACAAGCCTTTGGTGGTTCAAC | 59.519 | 47.619 | 0.00 | 0.00 | 38.66 | 3.18 |
1976 | 7930 | 6.019559 | GCTCAGTTTTTCCAGTTGAATTTGTC | 60.020 | 38.462 | 0.00 | 0.00 | 31.67 | 3.18 |
2040 | 7994 | 6.439375 | TCCTACTAGTTTGCAATCTTACCAGA | 59.561 | 38.462 | 14.92 | 5.51 | 0.00 | 3.86 |
2230 | 8186 | 4.278419 | GTCTCCTCCTTCTCTCTTATGAGC | 59.722 | 50.000 | 0.72 | 0.00 | 40.03 | 4.26 |
2433 | 8392 | 4.898861 | AGGATCAGATCTCCTCCAAACTAC | 59.101 | 45.833 | 18.18 | 0.00 | 38.87 | 2.73 |
2494 | 8455 | 9.253832 | TCTTGGATTATTTTCTAAGATTGGCAA | 57.746 | 29.630 | 0.68 | 0.68 | 38.03 | 4.52 |
2516 | 8478 | 9.208022 | GGCAAAGAATGATTAAAAGCTTAAAGT | 57.792 | 29.630 | 0.00 | 0.00 | 30.87 | 2.66 |
2602 | 8564 | 9.086758 | AGTAAATATATCTACTTTAGGCCGTGT | 57.913 | 33.333 | 0.00 | 0.00 | 0.00 | 4.49 |
2603 | 8565 | 9.702494 | GTAAATATATCTACTTTAGGCCGTGTT | 57.298 | 33.333 | 0.00 | 0.00 | 0.00 | 3.32 |
2604 | 8566 | 8.828688 | AAATATATCTACTTTAGGCCGTGTTC | 57.171 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
2605 | 8567 | 2.642139 | TCTACTTTAGGCCGTGTTCG | 57.358 | 50.000 | 0.00 | 0.00 | 0.00 | 3.95 |
2616 | 8578 | 2.690326 | CGTGTTCGGAATCCATCCC | 58.310 | 57.895 | 0.00 | 0.00 | 46.39 | 3.85 |
2617 | 8579 | 0.107897 | CGTGTTCGGAATCCATCCCA | 60.108 | 55.000 | 0.00 | 0.00 | 46.39 | 4.37 |
2618 | 8580 | 1.475034 | CGTGTTCGGAATCCATCCCAT | 60.475 | 52.381 | 0.00 | 0.00 | 46.39 | 4.00 |
2619 | 8581 | 2.222027 | GTGTTCGGAATCCATCCCATC | 58.778 | 52.381 | 0.00 | 0.00 | 46.39 | 3.51 |
2620 | 8582 | 1.142870 | TGTTCGGAATCCATCCCATCC | 59.857 | 52.381 | 0.00 | 0.00 | 46.39 | 3.51 |
2621 | 8583 | 4.701663 | CGGAATCCATCCCATCCG | 57.298 | 61.111 | 0.00 | 0.00 | 46.39 | 4.18 |
2622 | 8584 | 1.672356 | CGGAATCCATCCCATCCGC | 60.672 | 63.158 | 0.00 | 0.00 | 46.97 | 5.54 |
2623 | 8585 | 1.763770 | GGAATCCATCCCATCCGCT | 59.236 | 57.895 | 0.00 | 0.00 | 43.00 | 5.52 |
2624 | 8586 | 0.322008 | GGAATCCATCCCATCCGCTC | 60.322 | 60.000 | 0.00 | 0.00 | 43.00 | 5.03 |
2625 | 8587 | 0.322008 | GAATCCATCCCATCCGCTCC | 60.322 | 60.000 | 0.00 | 0.00 | 0.00 | 4.70 |
2626 | 8588 | 2.116983 | AATCCATCCCATCCGCTCCG | 62.117 | 60.000 | 0.00 | 0.00 | 0.00 | 4.63 |
2627 | 8589 | 3.233980 | CCATCCCATCCGCTCCGA | 61.234 | 66.667 | 0.00 | 0.00 | 0.00 | 4.55 |
2628 | 8590 | 2.029666 | CATCCCATCCGCTCCGAC | 59.970 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
2629 | 8591 | 2.123251 | ATCCCATCCGCTCCGACT | 60.123 | 61.111 | 0.00 | 0.00 | 0.00 | 4.18 |
2630 | 8592 | 2.203771 | ATCCCATCCGCTCCGACTC | 61.204 | 63.158 | 0.00 | 0.00 | 0.00 | 3.36 |
2631 | 8593 | 3.917760 | CCCATCCGCTCCGACTCC | 61.918 | 72.222 | 0.00 | 0.00 | 0.00 | 3.85 |
2632 | 8594 | 4.271816 | CCATCCGCTCCGACTCCG | 62.272 | 72.222 | 0.00 | 0.00 | 0.00 | 4.63 |
2633 | 8595 | 4.933064 | CATCCGCTCCGACTCCGC | 62.933 | 72.222 | 0.00 | 0.00 | 0.00 | 5.54 |
2645 | 8607 | 2.125512 | CTCCGCGGAGTTGGGAAG | 60.126 | 66.667 | 40.77 | 18.92 | 37.47 | 3.46 |
2646 | 8608 | 4.388499 | TCCGCGGAGTTGGGAAGC | 62.388 | 66.667 | 27.28 | 0.00 | 0.00 | 3.86 |
2647 | 8609 | 4.394712 | CCGCGGAGTTGGGAAGCT | 62.395 | 66.667 | 24.07 | 0.00 | 0.00 | 3.74 |
2648 | 8610 | 2.815647 | CGCGGAGTTGGGAAGCTC | 60.816 | 66.667 | 0.00 | 0.00 | 0.00 | 4.09 |
2649 | 8611 | 2.347490 | GCGGAGTTGGGAAGCTCA | 59.653 | 61.111 | 0.00 | 0.00 | 33.66 | 4.26 |
2650 | 8612 | 1.743252 | GCGGAGTTGGGAAGCTCAG | 60.743 | 63.158 | 0.00 | 0.00 | 33.66 | 3.35 |
2651 | 8613 | 1.674057 | CGGAGTTGGGAAGCTCAGT | 59.326 | 57.895 | 0.00 | 0.00 | 33.66 | 3.41 |
2652 | 8614 | 0.035458 | CGGAGTTGGGAAGCTCAGTT | 59.965 | 55.000 | 0.00 | 0.00 | 33.66 | 3.16 |
2653 | 8615 | 1.543429 | CGGAGTTGGGAAGCTCAGTTT | 60.543 | 52.381 | 0.00 | 0.00 | 33.66 | 2.66 |
2654 | 8616 | 2.289444 | CGGAGTTGGGAAGCTCAGTTTA | 60.289 | 50.000 | 0.00 | 0.00 | 33.66 | 2.01 |
2655 | 8617 | 3.339141 | GGAGTTGGGAAGCTCAGTTTAG | 58.661 | 50.000 | 0.00 | 0.00 | 33.66 | 1.85 |
2656 | 8618 | 3.339141 | GAGTTGGGAAGCTCAGTTTAGG | 58.661 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2657 | 8619 | 1.813178 | GTTGGGAAGCTCAGTTTAGGC | 59.187 | 52.381 | 0.00 | 0.00 | 0.00 | 3.93 |
2658 | 8620 | 0.328258 | TGGGAAGCTCAGTTTAGGCC | 59.672 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
2659 | 8621 | 0.744771 | GGGAAGCTCAGTTTAGGCCG | 60.745 | 60.000 | 0.00 | 0.00 | 0.00 | 6.13 |
2660 | 8622 | 1.369839 | GGAAGCTCAGTTTAGGCCGC | 61.370 | 60.000 | 0.00 | 0.00 | 0.00 | 6.53 |
2661 | 8623 | 0.391793 | GAAGCTCAGTTTAGGCCGCT | 60.392 | 55.000 | 0.00 | 0.00 | 0.00 | 5.52 |
2662 | 8624 | 0.391793 | AAGCTCAGTTTAGGCCGCTC | 60.392 | 55.000 | 0.00 | 0.00 | 0.00 | 5.03 |
2663 | 8625 | 1.815840 | GCTCAGTTTAGGCCGCTCC | 60.816 | 63.158 | 0.00 | 0.00 | 0.00 | 4.70 |
2664 | 8626 | 1.519455 | CTCAGTTTAGGCCGCTCCG | 60.519 | 63.158 | 0.00 | 0.00 | 40.77 | 4.63 |
2665 | 8627 | 2.227089 | CTCAGTTTAGGCCGCTCCGT | 62.227 | 60.000 | 0.00 | 0.00 | 40.77 | 4.69 |
2666 | 8628 | 0.966875 | TCAGTTTAGGCCGCTCCGTA | 60.967 | 55.000 | 0.00 | 0.00 | 40.77 | 4.02 |
2667 | 8629 | 0.108520 | CAGTTTAGGCCGCTCCGTAA | 60.109 | 55.000 | 0.00 | 0.00 | 40.77 | 3.18 |
2668 | 8630 | 0.609662 | AGTTTAGGCCGCTCCGTAAA | 59.390 | 50.000 | 0.00 | 0.00 | 40.77 | 2.01 |
2669 | 8631 | 1.002315 | AGTTTAGGCCGCTCCGTAAAA | 59.998 | 47.619 | 0.00 | 0.00 | 40.77 | 1.52 |
2670 | 8632 | 1.805943 | GTTTAGGCCGCTCCGTAAAAA | 59.194 | 47.619 | 0.00 | 0.00 | 40.77 | 1.94 |
2671 | 8633 | 2.406596 | TTAGGCCGCTCCGTAAAAAT | 57.593 | 45.000 | 0.00 | 0.00 | 40.77 | 1.82 |
2672 | 8634 | 1.658994 | TAGGCCGCTCCGTAAAAATG | 58.341 | 50.000 | 0.00 | 0.00 | 40.77 | 2.32 |
2673 | 8635 | 0.035820 | AGGCCGCTCCGTAAAAATGA | 60.036 | 50.000 | 0.00 | 0.00 | 40.77 | 2.57 |
2674 | 8636 | 0.806241 | GGCCGCTCCGTAAAAATGAA | 59.194 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2675 | 8637 | 1.466866 | GGCCGCTCCGTAAAAATGAAC | 60.467 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
2676 | 8638 | 1.467342 | GCCGCTCCGTAAAAATGAACT | 59.533 | 47.619 | 0.00 | 0.00 | 0.00 | 3.01 |
2677 | 8639 | 2.674357 | GCCGCTCCGTAAAAATGAACTA | 59.326 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
2678 | 8640 | 3.242316 | GCCGCTCCGTAAAAATGAACTAG | 60.242 | 47.826 | 0.00 | 0.00 | 0.00 | 2.57 |
2679 | 8641 | 4.178540 | CCGCTCCGTAAAAATGAACTAGA | 58.821 | 43.478 | 0.00 | 0.00 | 0.00 | 2.43 |
2680 | 8642 | 4.267928 | CCGCTCCGTAAAAATGAACTAGAG | 59.732 | 45.833 | 0.00 | 0.00 | 0.00 | 2.43 |
2681 | 8643 | 4.267928 | CGCTCCGTAAAAATGAACTAGAGG | 59.732 | 45.833 | 0.00 | 0.00 | 0.00 | 3.69 |
2682 | 8644 | 4.034163 | GCTCCGTAAAAATGAACTAGAGGC | 59.966 | 45.833 | 0.00 | 0.00 | 0.00 | 4.70 |
2683 | 8645 | 5.416271 | TCCGTAAAAATGAACTAGAGGCT | 57.584 | 39.130 | 0.00 | 0.00 | 0.00 | 4.58 |
2684 | 8646 | 5.416947 | TCCGTAAAAATGAACTAGAGGCTC | 58.583 | 41.667 | 6.34 | 6.34 | 0.00 | 4.70 |
2685 | 8647 | 4.267928 | CCGTAAAAATGAACTAGAGGCTCG | 59.732 | 45.833 | 9.22 | 0.00 | 0.00 | 5.03 |
2686 | 8648 | 4.863131 | CGTAAAAATGAACTAGAGGCTCGT | 59.137 | 41.667 | 9.22 | 0.00 | 0.00 | 4.18 |
2687 | 8649 | 5.004535 | CGTAAAAATGAACTAGAGGCTCGTC | 59.995 | 44.000 | 9.22 | 6.26 | 0.00 | 4.20 |
2688 | 8650 | 3.528597 | AAATGAACTAGAGGCTCGTCC | 57.471 | 47.619 | 9.22 | 0.00 | 0.00 | 4.79 |
2689 | 8651 | 1.025812 | ATGAACTAGAGGCTCGTCCG | 58.974 | 55.000 | 9.22 | 1.51 | 40.77 | 4.79 |
2690 | 8652 | 1.064458 | GAACTAGAGGCTCGTCCGC | 59.936 | 63.158 | 9.22 | 0.00 | 40.77 | 5.54 |
2692 | 8654 | 1.378124 | AACTAGAGGCTCGTCCGCTC | 61.378 | 60.000 | 9.22 | 0.00 | 41.47 | 5.03 |
2693 | 8655 | 2.516460 | TAGAGGCTCGTCCGCTCC | 60.516 | 66.667 | 9.22 | 0.00 | 41.47 | 4.70 |
2694 | 8656 | 3.339738 | TAGAGGCTCGTCCGCTCCA | 62.340 | 63.158 | 9.22 | 0.00 | 41.47 | 3.86 |
2695 | 8657 | 4.200283 | GAGGCTCGTCCGCTCCAG | 62.200 | 72.222 | 0.00 | 0.00 | 40.77 | 3.86 |
2696 | 8658 | 4.742649 | AGGCTCGTCCGCTCCAGA | 62.743 | 66.667 | 0.00 | 0.00 | 40.77 | 3.86 |
2697 | 8659 | 4.200283 | GGCTCGTCCGCTCCAGAG | 62.200 | 72.222 | 0.00 | 0.00 | 0.00 | 3.35 |
2708 | 8670 | 2.363018 | TCCAGAGCGGAGTGGAGG | 60.363 | 66.667 | 0.00 | 0.00 | 39.64 | 4.30 |
2709 | 8671 | 3.465403 | CCAGAGCGGAGTGGAGGG | 61.465 | 72.222 | 0.00 | 0.00 | 35.67 | 4.30 |
2710 | 8672 | 2.363018 | CAGAGCGGAGTGGAGGGA | 60.363 | 66.667 | 0.00 | 0.00 | 0.00 | 4.20 |
2711 | 8673 | 2.043450 | AGAGCGGAGTGGAGGGAG | 60.043 | 66.667 | 0.00 | 0.00 | 0.00 | 4.30 |
2712 | 8674 | 3.844090 | GAGCGGAGTGGAGGGAGC | 61.844 | 72.222 | 0.00 | 0.00 | 0.00 | 4.70 |
2716 | 8678 | 3.151022 | GGAGTGGAGGGAGCGGAG | 61.151 | 72.222 | 0.00 | 0.00 | 0.00 | 4.63 |
2717 | 8679 | 2.043852 | GAGTGGAGGGAGCGGAGA | 60.044 | 66.667 | 0.00 | 0.00 | 0.00 | 3.71 |
2718 | 8680 | 2.043450 | AGTGGAGGGAGCGGAGAG | 60.043 | 66.667 | 0.00 | 0.00 | 0.00 | 3.20 |
2719 | 8681 | 3.151022 | GTGGAGGGAGCGGAGAGG | 61.151 | 72.222 | 0.00 | 0.00 | 0.00 | 3.69 |
2720 | 8682 | 3.347590 | TGGAGGGAGCGGAGAGGA | 61.348 | 66.667 | 0.00 | 0.00 | 0.00 | 3.71 |
2721 | 8683 | 2.520741 | GGAGGGAGCGGAGAGGAG | 60.521 | 72.222 | 0.00 | 0.00 | 0.00 | 3.69 |
2722 | 8684 | 3.223589 | GAGGGAGCGGAGAGGAGC | 61.224 | 72.222 | 0.00 | 0.00 | 0.00 | 4.70 |
2723 | 8685 | 4.851214 | AGGGAGCGGAGAGGAGCC | 62.851 | 72.222 | 0.00 | 0.00 | 0.00 | 4.70 |
2730 | 8692 | 4.856607 | GGAGAGGAGCCGAACGCG | 62.857 | 72.222 | 3.53 | 3.53 | 44.76 | 6.01 |
2753 | 8715 | 3.125316 | GCCTTAGTGTTGTGTAGTGCATC | 59.875 | 47.826 | 0.00 | 0.00 | 0.00 | 3.91 |
2793 | 8755 | 1.734465 | GAAATGTTCCTGCTGAGACCG | 59.266 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
2802 | 8764 | 1.446966 | GCTGAGACCGCCTTCTGTC | 60.447 | 63.158 | 0.00 | 0.00 | 0.00 | 3.51 |
2817 | 8779 | 6.183360 | CGCCTTCTGTCGTTACATTATTTTCT | 60.183 | 38.462 | 0.00 | 0.00 | 34.37 | 2.52 |
3009 | 8971 | 1.271054 | CCTCCCCAGTTGACTTCACTG | 60.271 | 57.143 | 0.00 | 0.00 | 0.00 | 3.66 |
3010 | 8972 | 1.694150 | CTCCCCAGTTGACTTCACTGA | 59.306 | 52.381 | 1.54 | 0.00 | 33.65 | 3.41 |
3011 | 8973 | 1.416401 | TCCCCAGTTGACTTCACTGAC | 59.584 | 52.381 | 1.54 | 0.00 | 33.65 | 3.51 |
3012 | 8974 | 1.543429 | CCCCAGTTGACTTCACTGACC | 60.543 | 57.143 | 1.54 | 0.00 | 33.65 | 4.02 |
3013 | 8975 | 1.140852 | CCCAGTTGACTTCACTGACCA | 59.859 | 52.381 | 1.54 | 0.00 | 33.65 | 4.02 |
3014 | 8976 | 2.421388 | CCCAGTTGACTTCACTGACCAA | 60.421 | 50.000 | 1.54 | 0.00 | 33.65 | 3.67 |
3015 | 8977 | 2.874701 | CCAGTTGACTTCACTGACCAAG | 59.125 | 50.000 | 1.54 | 0.00 | 33.65 | 3.61 |
3016 | 8978 | 2.289002 | CAGTTGACTTCACTGACCAAGC | 59.711 | 50.000 | 0.00 | 0.00 | 33.65 | 4.01 |
3017 | 8979 | 2.171448 | AGTTGACTTCACTGACCAAGCT | 59.829 | 45.455 | 0.00 | 0.00 | 0.00 | 3.74 |
3018 | 8980 | 2.945668 | GTTGACTTCACTGACCAAGCTT | 59.054 | 45.455 | 0.00 | 0.00 | 0.00 | 3.74 |
3019 | 8981 | 2.564771 | TGACTTCACTGACCAAGCTTG | 58.435 | 47.619 | 19.93 | 19.93 | 0.00 | 4.01 |
3020 | 8982 | 2.170397 | TGACTTCACTGACCAAGCTTGA | 59.830 | 45.455 | 28.05 | 7.10 | 0.00 | 3.02 |
3021 | 8983 | 3.206150 | GACTTCACTGACCAAGCTTGAA | 58.794 | 45.455 | 28.05 | 11.09 | 0.00 | 2.69 |
3022 | 8984 | 3.209410 | ACTTCACTGACCAAGCTTGAAG | 58.791 | 45.455 | 28.05 | 21.52 | 37.76 | 3.02 |
3023 | 8985 | 1.597742 | TCACTGACCAAGCTTGAAGC | 58.402 | 50.000 | 28.05 | 9.59 | 42.84 | 3.86 |
3038 | 9000 | 6.924629 | GCTTGAAGCTTAAGAATTGTCTTG | 57.075 | 37.500 | 10.44 | 0.00 | 40.30 | 3.02 |
3039 | 9001 | 5.344396 | GCTTGAAGCTTAAGAATTGTCTTGC | 59.656 | 40.000 | 10.44 | 0.00 | 40.30 | 4.01 |
3040 | 9002 | 6.389830 | TTGAAGCTTAAGAATTGTCTTGCA | 57.610 | 33.333 | 6.67 | 0.00 | 44.12 | 4.08 |
3041 | 9003 | 5.762045 | TGAAGCTTAAGAATTGTCTTGCAC | 58.238 | 37.500 | 6.67 | 0.00 | 44.12 | 4.57 |
3042 | 9004 | 5.299028 | TGAAGCTTAAGAATTGTCTTGCACA | 59.701 | 36.000 | 6.67 | 0.00 | 44.12 | 4.57 |
3085 | 9047 | 8.579850 | TTGACATATTGAGCTTGGAATACTTT | 57.420 | 30.769 | 0.00 | 0.00 | 0.00 | 2.66 |
3215 | 9183 | 6.985188 | TGTTTTGAGACAATATAGTCCAGC | 57.015 | 37.500 | 0.00 | 0.00 | 39.34 | 4.85 |
3216 | 9184 | 6.472016 | TGTTTTGAGACAATATAGTCCAGCA | 58.528 | 36.000 | 0.00 | 0.00 | 39.34 | 4.41 |
3217 | 9185 | 6.595326 | TGTTTTGAGACAATATAGTCCAGCAG | 59.405 | 38.462 | 0.00 | 0.00 | 39.34 | 4.24 |
3262 | 9230 | 1.900254 | TATCCACTGCCCACCCATAA | 58.100 | 50.000 | 0.00 | 0.00 | 0.00 | 1.90 |
3397 | 9365 | 4.963276 | TGAGGTTGTGTTTTCTGACTTG | 57.037 | 40.909 | 0.00 | 0.00 | 0.00 | 3.16 |
3403 | 9372 | 2.163412 | TGTGTTTTCTGACTTGCGCTTT | 59.837 | 40.909 | 9.73 | 0.00 | 0.00 | 3.51 |
3654 | 9623 | 6.529125 | GTGGCTGTATTCATTTTGTTGAGATG | 59.471 | 38.462 | 0.00 | 0.00 | 0.00 | 2.90 |
3674 | 9643 | 4.781775 | TGTTTCCTGGGAACTTGAGTTA | 57.218 | 40.909 | 18.42 | 0.00 | 38.56 | 2.24 |
3820 | 9835 | 6.877611 | AAATGTTGACAAGGTAACCTACAG | 57.122 | 37.500 | 0.00 | 0.00 | 31.13 | 2.74 |
4013 | 10028 | 0.687354 | TTCTTCCCAGTCTGGCTGTC | 59.313 | 55.000 | 13.99 | 0.00 | 43.55 | 3.51 |
4020 | 10035 | 1.475751 | CCAGTCTGGCTGTCAACACTT | 60.476 | 52.381 | 5.79 | 0.00 | 43.55 | 3.16 |
4032 | 10047 | 5.506317 | GCTGTCAACACTTCTTAAGCATGTT | 60.506 | 40.000 | 11.03 | 11.03 | 33.86 | 2.71 |
4100 | 10117 | 4.942852 | AGTCAAAAATTTCCATTGCGTCA | 58.057 | 34.783 | 0.00 | 0.00 | 0.00 | 4.35 |
4101 | 10118 | 4.984161 | AGTCAAAAATTTCCATTGCGTCAG | 59.016 | 37.500 | 0.00 | 0.00 | 0.00 | 3.51 |
4105 | 10122 | 2.900122 | ATTTCCATTGCGTCAGTTCG | 57.100 | 45.000 | 0.00 | 0.00 | 0.00 | 3.95 |
4106 | 10123 | 1.872388 | TTTCCATTGCGTCAGTTCGA | 58.128 | 45.000 | 0.00 | 0.00 | 0.00 | 3.71 |
4126 | 10143 | 9.988350 | AGTTCGATAGTTTGTTTATGCTTATTG | 57.012 | 29.630 | 0.00 | 0.00 | 37.40 | 1.90 |
4149 | 10166 | 9.739276 | ATTGATTATTCTGAAACACAGGTTCTA | 57.261 | 29.630 | 0.00 | 0.00 | 45.76 | 2.10 |
4152 | 10169 | 3.380479 | TCTGAAACACAGGTTCTACCG | 57.620 | 47.619 | 0.00 | 0.00 | 44.90 | 4.02 |
4168 | 10185 | 0.321996 | ACCGGAAGCTCCAGAAGAAC | 59.678 | 55.000 | 9.46 | 0.00 | 35.91 | 3.01 |
4176 | 10193 | 4.181309 | AGCTCCAGAAGAACTAGTTTCG | 57.819 | 45.455 | 10.02 | 1.67 | 39.47 | 3.46 |
4179 | 10196 | 4.739195 | CTCCAGAAGAACTAGTTTCGGAG | 58.261 | 47.826 | 20.91 | 20.91 | 39.47 | 4.63 |
4196 | 10213 | 0.744414 | GAGCTTGCTTGGCGGTATGA | 60.744 | 55.000 | 0.00 | 0.00 | 34.52 | 2.15 |
4205 | 10222 | 3.248602 | GCTTGGCGGTATGATAGTTTCTG | 59.751 | 47.826 | 0.00 | 0.00 | 0.00 | 3.02 |
4226 | 10243 | 2.702270 | AGCTTCCCCTTGTTTTCCAT | 57.298 | 45.000 | 0.00 | 0.00 | 0.00 | 3.41 |
4227 | 10244 | 2.976440 | AGCTTCCCCTTGTTTTCCATT | 58.024 | 42.857 | 0.00 | 0.00 | 0.00 | 3.16 |
4231 | 10248 | 5.012046 | AGCTTCCCCTTGTTTTCCATTTAAG | 59.988 | 40.000 | 0.00 | 0.00 | 0.00 | 1.85 |
4232 | 10249 | 5.011635 | GCTTCCCCTTGTTTTCCATTTAAGA | 59.988 | 40.000 | 0.00 | 0.00 | 0.00 | 2.10 |
4248 | 10265 | 8.156165 | TCCATTTAAGAGCAATTTTTGAACCAT | 58.844 | 29.630 | 0.00 | 0.00 | 0.00 | 3.55 |
4258 | 10275 | 7.499895 | AGCAATTTTTGAACCATCAGATTGTTT | 59.500 | 29.630 | 1.52 | 0.00 | 36.10 | 2.83 |
4270 | 10287 | 7.335422 | ACCATCAGATTGTTTGTTCATCTCTAC | 59.665 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
4292 | 10311 | 6.170675 | ACGTATGAAACTGAAGAAAGCATC | 57.829 | 37.500 | 0.00 | 0.00 | 0.00 | 3.91 |
4296 | 10315 | 7.848051 | CGTATGAAACTGAAGAAAGCATCATAC | 59.152 | 37.037 | 10.87 | 10.87 | 40.85 | 2.39 |
4438 | 10552 | 6.486253 | TTTTATGCTTCTTGCTCAGTAGTG | 57.514 | 37.500 | 0.00 | 0.00 | 43.37 | 2.74 |
4569 | 10683 | 2.726066 | GCACTTGCTCGTGACAATAAGC | 60.726 | 50.000 | 9.63 | 0.00 | 37.06 | 3.09 |
4579 | 10693 | 1.804151 | TGACAATAAGCGGTGCACTTC | 59.196 | 47.619 | 17.98 | 8.75 | 0.00 | 3.01 |
4741 | 10867 | 2.682856 | TGAAAGTGGTCACTGTTTCTGC | 59.317 | 45.455 | 4.22 | 0.00 | 41.58 | 4.26 |
4771 | 10897 | 2.954318 | GCATCTGGTATGCTCCATTGTT | 59.046 | 45.455 | 2.78 | 0.00 | 41.52 | 2.83 |
4797 | 10923 | 3.947910 | AAATCATGTTTGGAGTGCTGG | 57.052 | 42.857 | 0.00 | 0.00 | 0.00 | 4.85 |
4805 | 10931 | 3.006247 | GTTTGGAGTGCTGGAGAAGATC | 58.994 | 50.000 | 0.00 | 0.00 | 0.00 | 2.75 |
4854 | 10981 | 3.312421 | TGTCTTGTGTAAAGTTGCAGAGC | 59.688 | 43.478 | 0.00 | 0.00 | 0.00 | 4.09 |
4865 | 10992 | 2.899339 | GCAGAGCTCGCCCCAATC | 60.899 | 66.667 | 16.50 | 0.00 | 0.00 | 2.67 |
4868 | 10995 | 0.393537 | CAGAGCTCGCCCCAATCTTT | 60.394 | 55.000 | 8.37 | 0.00 | 0.00 | 2.52 |
4875 | 11002 | 0.670239 | CGCCCCAATCTTTGTTTGCC | 60.670 | 55.000 | 0.00 | 0.00 | 0.00 | 4.52 |
4896 | 11023 | 4.394920 | GCCGAATTAACCATTTGACTCTGA | 59.605 | 41.667 | 0.00 | 0.00 | 0.00 | 3.27 |
4899 | 11026 | 6.183360 | CCGAATTAACCATTTGACTCTGACTC | 60.183 | 42.308 | 0.00 | 0.00 | 0.00 | 3.36 |
4908 | 11035 | 2.201732 | TGACTCTGACTCGTGCAAAAC | 58.798 | 47.619 | 0.00 | 0.00 | 0.00 | 2.43 |
4931 | 11058 | 3.066900 | CGTTTTGGTACACACATTTCCCA | 59.933 | 43.478 | 0.00 | 0.00 | 39.29 | 4.37 |
4933 | 11060 | 5.420409 | GTTTTGGTACACACATTTCCCAAA | 58.580 | 37.500 | 0.00 | 0.00 | 39.29 | 3.28 |
4948 | 11075 | 8.090214 | ACATTTCCCAAACTATTTGTGAAGATG | 58.910 | 33.333 | 13.37 | 13.37 | 38.07 | 2.90 |
4956 | 11083 | 7.539712 | AACTATTTGTGAAGATGACGTATGG | 57.460 | 36.000 | 0.00 | 0.00 | 0.00 | 2.74 |
4957 | 11084 | 6.640518 | ACTATTTGTGAAGATGACGTATGGT | 58.359 | 36.000 | 0.00 | 0.00 | 0.00 | 3.55 |
4958 | 11085 | 7.778083 | ACTATTTGTGAAGATGACGTATGGTA | 58.222 | 34.615 | 0.00 | 0.00 | 0.00 | 3.25 |
4959 | 11086 | 7.921214 | ACTATTTGTGAAGATGACGTATGGTAG | 59.079 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
4960 | 11087 | 5.907866 | TTGTGAAGATGACGTATGGTAGA | 57.092 | 39.130 | 0.00 | 0.00 | 0.00 | 2.59 |
4961 | 11088 | 6.465439 | TTGTGAAGATGACGTATGGTAGAT | 57.535 | 37.500 | 0.00 | 0.00 | 0.00 | 1.98 |
4962 | 11089 | 6.073327 | TGTGAAGATGACGTATGGTAGATC | 57.927 | 41.667 | 0.00 | 0.00 | 0.00 | 2.75 |
4963 | 11090 | 5.828328 | TGTGAAGATGACGTATGGTAGATCT | 59.172 | 40.000 | 0.00 | 0.00 | 32.06 | 2.75 |
4964 | 11091 | 6.996282 | TGTGAAGATGACGTATGGTAGATCTA | 59.004 | 38.462 | 0.00 | 0.00 | 31.06 | 1.98 |
4965 | 11092 | 7.665974 | TGTGAAGATGACGTATGGTAGATCTAT | 59.334 | 37.037 | 5.57 | 0.00 | 31.06 | 1.98 |
4966 | 11093 | 7.965655 | GTGAAGATGACGTATGGTAGATCTATG | 59.034 | 40.741 | 5.57 | 0.00 | 31.06 | 2.23 |
4971 | 11098 | 7.436430 | TGACGTATGGTAGATCTATGACTTC | 57.564 | 40.000 | 5.57 | 5.94 | 0.00 | 3.01 |
4973 | 11100 | 5.711036 | ACGTATGGTAGATCTATGACTTCCC | 59.289 | 44.000 | 5.57 | 1.09 | 0.00 | 3.97 |
4977 | 11104 | 6.275692 | TGGTAGATCTATGACTTCCCTGTA | 57.724 | 41.667 | 5.57 | 0.00 | 0.00 | 2.74 |
4984 | 11111 | 6.681729 | TCTATGACTTCCCTGTAACAACTT | 57.318 | 37.500 | 0.00 | 0.00 | 0.00 | 2.66 |
4985 | 11112 | 6.464222 | TCTATGACTTCCCTGTAACAACTTG | 58.536 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
4986 | 11113 | 3.815809 | TGACTTCCCTGTAACAACTTGG | 58.184 | 45.455 | 0.00 | 0.00 | 0.00 | 3.61 |
4987 | 11114 | 3.456644 | TGACTTCCCTGTAACAACTTGGA | 59.543 | 43.478 | 0.00 | 0.00 | 0.00 | 3.53 |
4988 | 11115 | 4.065789 | GACTTCCCTGTAACAACTTGGAG | 58.934 | 47.826 | 0.00 | 0.00 | 0.00 | 3.86 |
4990 | 11117 | 4.351111 | ACTTCCCTGTAACAACTTGGAGAT | 59.649 | 41.667 | 0.00 | 0.00 | 0.00 | 2.75 |
4993 | 11120 | 6.636454 | TCCCTGTAACAACTTGGAGATAAT | 57.364 | 37.500 | 0.00 | 0.00 | 0.00 | 1.28 |
4994 | 11121 | 7.743116 | TCCCTGTAACAACTTGGAGATAATA | 57.257 | 36.000 | 0.00 | 0.00 | 0.00 | 0.98 |
4996 | 11123 | 8.778059 | TCCCTGTAACAACTTGGAGATAATAAT | 58.222 | 33.333 | 0.00 | 0.00 | 0.00 | 1.28 |
4997 | 11124 | 8.840321 | CCCTGTAACAACTTGGAGATAATAATG | 58.160 | 37.037 | 0.00 | 0.00 | 0.00 | 1.90 |
5036 | 11163 | 4.371624 | AACACTCTGATCCACCATTTCA | 57.628 | 40.909 | 0.00 | 0.00 | 0.00 | 2.69 |
5041 | 11169 | 2.912295 | TCTGATCCACCATTTCAGTCCA | 59.088 | 45.455 | 0.00 | 0.00 | 38.39 | 4.02 |
5042 | 11170 | 3.012518 | CTGATCCACCATTTCAGTCCAC | 58.987 | 50.000 | 0.00 | 0.00 | 33.72 | 4.02 |
5043 | 11171 | 2.374839 | TGATCCACCATTTCAGTCCACA | 59.625 | 45.455 | 0.00 | 0.00 | 0.00 | 4.17 |
5049 | 11177 | 1.667724 | CCATTTCAGTCCACATCTCGC | 59.332 | 52.381 | 0.00 | 0.00 | 0.00 | 5.03 |
5053 | 11181 | 1.478631 | TCAGTCCACATCTCGCTGAT | 58.521 | 50.000 | 0.00 | 0.00 | 32.09 | 2.90 |
5062 | 11190 | 6.017605 | GTCCACATCTCGCTGATTATTTGAAT | 60.018 | 38.462 | 0.00 | 0.00 | 32.05 | 2.57 |
5066 | 11194 | 9.720667 | CACATCTCGCTGATTATTTGAATTAAA | 57.279 | 29.630 | 0.00 | 0.00 | 32.05 | 1.52 |
5111 | 11239 | 4.230314 | GAGTTTTGACTCCTTGGAAAGC | 57.770 | 45.455 | 0.00 | 0.00 | 44.44 | 3.51 |
5221 | 11356 | 2.183409 | CCAACAATGGCGGAGAAGG | 58.817 | 57.895 | 0.00 | 0.00 | 40.58 | 3.46 |
5222 | 11357 | 1.315257 | CCAACAATGGCGGAGAAGGG | 61.315 | 60.000 | 0.00 | 0.00 | 40.58 | 3.95 |
5223 | 11358 | 0.322456 | CAACAATGGCGGAGAAGGGA | 60.322 | 55.000 | 0.00 | 0.00 | 0.00 | 4.20 |
5224 | 11359 | 0.035056 | AACAATGGCGGAGAAGGGAG | 60.035 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
5225 | 11360 | 1.201429 | ACAATGGCGGAGAAGGGAGT | 61.201 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
5268 | 11403 | 4.935495 | CCGATGGCCATCCGGGTG | 62.935 | 72.222 | 34.76 | 22.10 | 39.65 | 4.61 |
5300 | 11435 | 3.766691 | GCTGAAGGGCGTCGGGTA | 61.767 | 66.667 | 0.00 | 0.00 | 0.00 | 3.69 |
5301 | 11436 | 2.183555 | CTGAAGGGCGTCGGGTAC | 59.816 | 66.667 | 0.00 | 0.00 | 0.00 | 3.34 |
5320 | 11455 | 1.712663 | GAGTACGTCGACGAGGACC | 59.287 | 63.158 | 41.52 | 22.79 | 43.02 | 4.46 |
5321 | 11456 | 0.739112 | GAGTACGTCGACGAGGACCT | 60.739 | 60.000 | 41.52 | 26.47 | 43.02 | 3.85 |
5322 | 11457 | 0.739112 | AGTACGTCGACGAGGACCTC | 60.739 | 60.000 | 41.52 | 21.44 | 43.02 | 3.85 |
5331 | 11466 | 2.125350 | GAGGACCTCGCCAGCAAG | 60.125 | 66.667 | 5.55 | 0.00 | 0.00 | 4.01 |
5332 | 11467 | 2.604686 | AGGACCTCGCCAGCAAGA | 60.605 | 61.111 | 0.00 | 0.00 | 0.00 | 3.02 |
5333 | 11468 | 2.125350 | GGACCTCGCCAGCAAGAG | 60.125 | 66.667 | 0.00 | 0.00 | 0.00 | 2.85 |
5416 | 12670 | 3.822192 | CGATCGCCGAGTCCACCA | 61.822 | 66.667 | 0.26 | 0.00 | 41.76 | 4.17 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
79 | 83 | 3.788333 | AACATATGGCAACTGACATGC | 57.212 | 42.857 | 8.36 | 0.00 | 44.95 | 4.06 |
252 | 258 | 6.481643 | ACTAACACTAGGTTGTTGCCATATT | 58.518 | 36.000 | 8.58 | 0.00 | 40.04 | 1.28 |
254 | 260 | 5.492855 | ACTAACACTAGGTTGTTGCCATA | 57.507 | 39.130 | 8.58 | 0.00 | 40.04 | 2.74 |
263 | 269 | 3.513517 | TGCCACCTACTAACACTAGGTT | 58.486 | 45.455 | 0.00 | 0.00 | 41.13 | 3.50 |
264 | 270 | 3.179902 | TGCCACCTACTAACACTAGGT | 57.820 | 47.619 | 0.00 | 0.00 | 44.20 | 3.08 |
371 | 377 | 5.010012 | CAGTTGCCATCTTAGGTCAAAGTTT | 59.990 | 40.000 | 0.00 | 0.00 | 0.00 | 2.66 |
679 | 687 | 1.268283 | GGTGCCTAAGAGGACCAGCT | 61.268 | 60.000 | 0.00 | 0.00 | 37.67 | 4.24 |
704 | 712 | 0.981183 | AGGAATCTGCCCACACGTTA | 59.019 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
843 | 6759 | 4.226168 | AGGACCTGATTCTTTCCGAGATTT | 59.774 | 41.667 | 0.00 | 0.00 | 33.49 | 2.17 |
870 | 6786 | 1.556911 | TGAGAAAGGAGGGTGATGCTC | 59.443 | 52.381 | 0.00 | 0.00 | 0.00 | 4.26 |
1065 | 7001 | 1.304547 | AGTGGAGGACGGTGAGAGG | 60.305 | 63.158 | 0.00 | 0.00 | 0.00 | 3.69 |
1224 | 7166 | 2.434884 | AGGCAGTTCGTCATGGCG | 60.435 | 61.111 | 14.91 | 14.91 | 45.91 | 5.69 |
1245 | 7187 | 1.304217 | GAGGTCGAGGTGGGTCTCA | 60.304 | 63.158 | 0.00 | 0.00 | 33.59 | 3.27 |
1341 | 7283 | 1.372997 | CGGTCACTCACGGGAACTG | 60.373 | 63.158 | 0.00 | 0.00 | 42.99 | 3.16 |
1342 | 7284 | 1.831286 | ACGGTCACTCACGGGAACT | 60.831 | 57.895 | 0.00 | 0.00 | 0.00 | 3.01 |
1348 | 7290 | 2.355837 | CACCCACGGTCACTCACG | 60.356 | 66.667 | 0.00 | 0.00 | 31.02 | 4.35 |
1349 | 7291 | 0.463116 | AAACACCCACGGTCACTCAC | 60.463 | 55.000 | 0.00 | 0.00 | 31.02 | 3.51 |
1361 | 7303 | 1.228862 | ACCTGCCCATCAAACACCC | 60.229 | 57.895 | 0.00 | 0.00 | 0.00 | 4.61 |
1386 | 7330 | 2.513204 | TCCCCGCTCTCGTAGACG | 60.513 | 66.667 | 0.00 | 0.00 | 41.45 | 4.18 |
1511 | 7455 | 8.613060 | TGAAGAATCCTATGCTTATCAACATC | 57.387 | 34.615 | 0.00 | 0.00 | 0.00 | 3.06 |
1571 | 7524 | 0.325933 | AACCTGCAGCATACAGAGCA | 59.674 | 50.000 | 8.66 | 0.00 | 37.32 | 4.26 |
1572 | 7525 | 1.457346 | AAACCTGCAGCATACAGAGC | 58.543 | 50.000 | 8.66 | 0.00 | 37.32 | 4.09 |
1574 | 7527 | 3.423539 | AGAAAACCTGCAGCATACAGA | 57.576 | 42.857 | 8.66 | 0.00 | 37.32 | 3.41 |
1576 | 7529 | 4.253685 | GAGTAGAAAACCTGCAGCATACA | 58.746 | 43.478 | 8.66 | 0.00 | 0.00 | 2.29 |
1582 | 7535 | 7.615582 | TGAATTATGAGTAGAAAACCTGCAG | 57.384 | 36.000 | 6.78 | 6.78 | 0.00 | 4.41 |
1619 | 7572 | 5.579904 | GGAACGTCATAACTTTAAGAGGGAC | 59.420 | 44.000 | 0.00 | 0.53 | 0.00 | 4.46 |
1667 | 7621 | 9.013229 | AGACATGACTATGAACAAATGCTTTTA | 57.987 | 29.630 | 0.00 | 0.00 | 37.73 | 1.52 |
1668 | 7622 | 7.889469 | AGACATGACTATGAACAAATGCTTTT | 58.111 | 30.769 | 0.00 | 0.00 | 37.73 | 2.27 |
1669 | 7623 | 7.458409 | AGACATGACTATGAACAAATGCTTT | 57.542 | 32.000 | 0.00 | 0.00 | 37.73 | 3.51 |
1695 | 7649 | 1.070242 | CAACGTTGTGCGCATCAACTA | 60.070 | 47.619 | 32.72 | 12.94 | 46.11 | 2.24 |
1880 | 7834 | 1.066573 | GGAGTGATGTGACTGGTCCTG | 60.067 | 57.143 | 0.00 | 0.00 | 0.00 | 3.86 |
1976 | 7930 | 1.478510 | AGCATGAGTTAGGTCTCACCG | 59.521 | 52.381 | 0.00 | 0.00 | 45.40 | 4.94 |
2040 | 7994 | 7.994911 | TGATTAGCACTTCCATCAAGATTATGT | 59.005 | 33.333 | 0.00 | 0.00 | 35.82 | 2.29 |
2230 | 8186 | 2.107950 | TGCCTGTAACAAGGAATCCG | 57.892 | 50.000 | 0.00 | 0.00 | 40.02 | 4.18 |
2516 | 8478 | 7.821359 | CAGAAACCTTCTTACAGAATGATGAGA | 59.179 | 37.037 | 0.00 | 0.00 | 36.38 | 3.27 |
2539 | 8501 | 6.097356 | ACGATAAACTTCAATAACTCGCAGA | 58.903 | 36.000 | 0.00 | 0.00 | 0.00 | 4.26 |
2544 | 8506 | 9.530129 | CAAGTGAACGATAAACTTCAATAACTC | 57.470 | 33.333 | 0.00 | 0.00 | 31.88 | 3.01 |
2592 | 8554 | 0.108041 | GGATTCCGAACACGGCCTAA | 60.108 | 55.000 | 0.00 | 0.00 | 45.52 | 2.69 |
2593 | 8555 | 1.259142 | TGGATTCCGAACACGGCCTA | 61.259 | 55.000 | 0.00 | 0.00 | 45.52 | 3.93 |
2594 | 8556 | 1.910580 | ATGGATTCCGAACACGGCCT | 61.911 | 55.000 | 0.00 | 0.00 | 45.52 | 5.19 |
2595 | 8557 | 1.436983 | GATGGATTCCGAACACGGCC | 61.437 | 60.000 | 3.67 | 0.00 | 45.52 | 6.13 |
2596 | 8558 | 1.436983 | GGATGGATTCCGAACACGGC | 61.437 | 60.000 | 3.67 | 0.00 | 45.52 | 5.68 |
2597 | 8559 | 0.814010 | GGGATGGATTCCGAACACGG | 60.814 | 60.000 | 0.00 | 0.00 | 46.52 | 4.94 |
2598 | 8560 | 0.107897 | TGGGATGGATTCCGAACACG | 60.108 | 55.000 | 0.00 | 0.00 | 46.52 | 4.49 |
2599 | 8561 | 2.222027 | GATGGGATGGATTCCGAACAC | 58.778 | 52.381 | 0.00 | 0.00 | 46.52 | 3.32 |
2600 | 8562 | 1.142870 | GGATGGGATGGATTCCGAACA | 59.857 | 52.381 | 0.00 | 0.00 | 46.52 | 3.18 |
2601 | 8563 | 1.897560 | GGATGGGATGGATTCCGAAC | 58.102 | 55.000 | 0.00 | 0.00 | 46.52 | 3.95 |
2604 | 8566 | 4.701663 | CGGATGGGATGGATTCCG | 57.298 | 61.111 | 0.00 | 0.00 | 46.52 | 4.30 |
2605 | 8567 | 0.322008 | GAGCGGATGGGATGGATTCC | 60.322 | 60.000 | 0.00 | 0.00 | 44.62 | 3.01 |
2606 | 8568 | 0.322008 | GGAGCGGATGGGATGGATTC | 60.322 | 60.000 | 0.00 | 0.00 | 0.00 | 2.52 |
2607 | 8569 | 1.763770 | GGAGCGGATGGGATGGATT | 59.236 | 57.895 | 0.00 | 0.00 | 0.00 | 3.01 |
2608 | 8570 | 2.587247 | CGGAGCGGATGGGATGGAT | 61.587 | 63.158 | 0.00 | 0.00 | 0.00 | 3.41 |
2609 | 8571 | 3.233980 | CGGAGCGGATGGGATGGA | 61.234 | 66.667 | 0.00 | 0.00 | 0.00 | 3.41 |
2610 | 8572 | 3.233980 | TCGGAGCGGATGGGATGG | 61.234 | 66.667 | 0.00 | 0.00 | 0.00 | 3.51 |
2611 | 8573 | 2.029666 | GTCGGAGCGGATGGGATG | 59.970 | 66.667 | 0.00 | 0.00 | 0.00 | 3.51 |
2612 | 8574 | 2.123251 | AGTCGGAGCGGATGGGAT | 60.123 | 61.111 | 0.00 | 0.00 | 0.00 | 3.85 |
2613 | 8575 | 2.833582 | GAGTCGGAGCGGATGGGA | 60.834 | 66.667 | 0.00 | 0.00 | 0.00 | 4.37 |
2614 | 8576 | 3.917760 | GGAGTCGGAGCGGATGGG | 61.918 | 72.222 | 0.00 | 0.00 | 0.00 | 4.00 |
2615 | 8577 | 4.271816 | CGGAGTCGGAGCGGATGG | 62.272 | 72.222 | 0.00 | 0.00 | 0.00 | 3.51 |
2616 | 8578 | 4.933064 | GCGGAGTCGGAGCGGATG | 62.933 | 72.222 | 1.18 | 0.00 | 36.79 | 3.51 |
2628 | 8590 | 2.125512 | CTTCCCAACTCCGCGGAG | 60.126 | 66.667 | 45.26 | 45.26 | 46.91 | 4.63 |
2629 | 8591 | 4.388499 | GCTTCCCAACTCCGCGGA | 62.388 | 66.667 | 29.03 | 29.03 | 0.00 | 5.54 |
2630 | 8592 | 4.394712 | AGCTTCCCAACTCCGCGG | 62.395 | 66.667 | 22.12 | 22.12 | 0.00 | 6.46 |
2631 | 8593 | 2.815647 | GAGCTTCCCAACTCCGCG | 60.816 | 66.667 | 0.00 | 0.00 | 0.00 | 6.46 |
2632 | 8594 | 1.743252 | CTGAGCTTCCCAACTCCGC | 60.743 | 63.158 | 0.00 | 0.00 | 31.65 | 5.54 |
2633 | 8595 | 0.035458 | AACTGAGCTTCCCAACTCCG | 59.965 | 55.000 | 0.00 | 0.00 | 31.65 | 4.63 |
2634 | 8596 | 2.278332 | AAACTGAGCTTCCCAACTCC | 57.722 | 50.000 | 0.00 | 0.00 | 31.65 | 3.85 |
2635 | 8597 | 3.339141 | CCTAAACTGAGCTTCCCAACTC | 58.661 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2636 | 8598 | 2.553247 | GCCTAAACTGAGCTTCCCAACT | 60.553 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2637 | 8599 | 1.813178 | GCCTAAACTGAGCTTCCCAAC | 59.187 | 52.381 | 0.00 | 0.00 | 0.00 | 3.77 |
2638 | 8600 | 1.271926 | GGCCTAAACTGAGCTTCCCAA | 60.272 | 52.381 | 0.00 | 0.00 | 0.00 | 4.12 |
2639 | 8601 | 0.328258 | GGCCTAAACTGAGCTTCCCA | 59.672 | 55.000 | 0.00 | 0.00 | 0.00 | 4.37 |
2640 | 8602 | 0.744771 | CGGCCTAAACTGAGCTTCCC | 60.745 | 60.000 | 0.00 | 0.00 | 0.00 | 3.97 |
2641 | 8603 | 1.369839 | GCGGCCTAAACTGAGCTTCC | 61.370 | 60.000 | 0.00 | 0.00 | 0.00 | 3.46 |
2642 | 8604 | 0.391793 | AGCGGCCTAAACTGAGCTTC | 60.392 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
2643 | 8605 | 0.391793 | GAGCGGCCTAAACTGAGCTT | 60.392 | 55.000 | 0.00 | 0.00 | 34.85 | 3.74 |
2644 | 8606 | 1.219393 | GAGCGGCCTAAACTGAGCT | 59.781 | 57.895 | 0.00 | 0.00 | 37.69 | 4.09 |
2645 | 8607 | 1.815840 | GGAGCGGCCTAAACTGAGC | 60.816 | 63.158 | 0.00 | 0.00 | 0.00 | 4.26 |
2646 | 8608 | 1.519455 | CGGAGCGGCCTAAACTGAG | 60.519 | 63.158 | 0.00 | 0.00 | 0.00 | 3.35 |
2647 | 8609 | 0.966875 | TACGGAGCGGCCTAAACTGA | 60.967 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2648 | 8610 | 0.108520 | TTACGGAGCGGCCTAAACTG | 60.109 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2649 | 8611 | 0.609662 | TTTACGGAGCGGCCTAAACT | 59.390 | 50.000 | 0.00 | 0.00 | 0.00 | 2.66 |
2650 | 8612 | 1.441738 | TTTTACGGAGCGGCCTAAAC | 58.558 | 50.000 | 0.00 | 0.00 | 0.00 | 2.01 |
2651 | 8613 | 2.181954 | TTTTTACGGAGCGGCCTAAA | 57.818 | 45.000 | 0.00 | 0.00 | 0.00 | 1.85 |
2652 | 8614 | 2.011222 | CATTTTTACGGAGCGGCCTAA | 58.989 | 47.619 | 0.00 | 0.00 | 0.00 | 2.69 |
2653 | 8615 | 1.207570 | TCATTTTTACGGAGCGGCCTA | 59.792 | 47.619 | 0.00 | 0.00 | 0.00 | 3.93 |
2654 | 8616 | 0.035820 | TCATTTTTACGGAGCGGCCT | 60.036 | 50.000 | 0.00 | 0.00 | 0.00 | 5.19 |
2655 | 8617 | 0.806241 | TTCATTTTTACGGAGCGGCC | 59.194 | 50.000 | 0.00 | 0.00 | 0.00 | 6.13 |
2656 | 8618 | 1.467342 | AGTTCATTTTTACGGAGCGGC | 59.533 | 47.619 | 0.00 | 0.00 | 0.00 | 6.53 |
2657 | 8619 | 4.178540 | TCTAGTTCATTTTTACGGAGCGG | 58.821 | 43.478 | 0.00 | 0.00 | 0.00 | 5.52 |
2658 | 8620 | 4.267928 | CCTCTAGTTCATTTTTACGGAGCG | 59.732 | 45.833 | 0.00 | 0.00 | 0.00 | 5.03 |
2659 | 8621 | 4.034163 | GCCTCTAGTTCATTTTTACGGAGC | 59.966 | 45.833 | 0.00 | 0.00 | 0.00 | 4.70 |
2660 | 8622 | 5.420409 | AGCCTCTAGTTCATTTTTACGGAG | 58.580 | 41.667 | 0.00 | 0.00 | 0.00 | 4.63 |
2661 | 8623 | 5.416271 | AGCCTCTAGTTCATTTTTACGGA | 57.584 | 39.130 | 0.00 | 0.00 | 0.00 | 4.69 |
2662 | 8624 | 4.267928 | CGAGCCTCTAGTTCATTTTTACGG | 59.732 | 45.833 | 0.00 | 0.00 | 0.00 | 4.02 |
2663 | 8625 | 4.863131 | ACGAGCCTCTAGTTCATTTTTACG | 59.137 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
2664 | 8626 | 5.291371 | GGACGAGCCTCTAGTTCATTTTTAC | 59.709 | 44.000 | 0.00 | 0.00 | 0.00 | 2.01 |
2665 | 8627 | 5.416947 | GGACGAGCCTCTAGTTCATTTTTA | 58.583 | 41.667 | 0.00 | 0.00 | 0.00 | 1.52 |
2666 | 8628 | 4.254492 | GGACGAGCCTCTAGTTCATTTTT | 58.746 | 43.478 | 0.00 | 0.00 | 0.00 | 1.94 |
2667 | 8629 | 3.676324 | CGGACGAGCCTCTAGTTCATTTT | 60.676 | 47.826 | 0.00 | 0.00 | 0.00 | 1.82 |
2668 | 8630 | 2.159226 | CGGACGAGCCTCTAGTTCATTT | 60.159 | 50.000 | 0.00 | 0.00 | 0.00 | 2.32 |
2669 | 8631 | 1.405821 | CGGACGAGCCTCTAGTTCATT | 59.594 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
2670 | 8632 | 1.025812 | CGGACGAGCCTCTAGTTCAT | 58.974 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2671 | 8633 | 1.654954 | GCGGACGAGCCTCTAGTTCA | 61.655 | 60.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2672 | 8634 | 1.064458 | GCGGACGAGCCTCTAGTTC | 59.936 | 63.158 | 0.00 | 0.00 | 0.00 | 3.01 |
2673 | 8635 | 1.378124 | GAGCGGACGAGCCTCTAGTT | 61.378 | 60.000 | 0.00 | 0.00 | 38.01 | 2.24 |
2674 | 8636 | 1.820481 | GAGCGGACGAGCCTCTAGT | 60.820 | 63.158 | 0.00 | 0.00 | 38.01 | 2.57 |
2675 | 8637 | 2.548295 | GGAGCGGACGAGCCTCTAG | 61.548 | 68.421 | 0.00 | 0.00 | 38.01 | 2.43 |
2676 | 8638 | 2.516460 | GGAGCGGACGAGCCTCTA | 60.516 | 66.667 | 0.00 | 0.00 | 38.01 | 2.43 |
2677 | 8639 | 4.742649 | TGGAGCGGACGAGCCTCT | 62.743 | 66.667 | 0.00 | 0.00 | 38.01 | 3.69 |
2678 | 8640 | 4.200283 | CTGGAGCGGACGAGCCTC | 62.200 | 72.222 | 0.00 | 0.00 | 38.01 | 4.70 |
2679 | 8641 | 4.742649 | TCTGGAGCGGACGAGCCT | 62.743 | 66.667 | 0.00 | 0.00 | 38.01 | 4.58 |
2680 | 8642 | 4.200283 | CTCTGGAGCGGACGAGCC | 62.200 | 72.222 | 0.00 | 0.00 | 38.01 | 4.70 |
2681 | 8643 | 4.863925 | GCTCTGGAGCGGACGAGC | 62.864 | 72.222 | 6.84 | 5.59 | 45.29 | 5.03 |
2692 | 8654 | 3.465403 | CCCTCCACTCCGCTCTGG | 61.465 | 72.222 | 0.00 | 0.00 | 40.09 | 3.86 |
2693 | 8655 | 2.363018 | TCCCTCCACTCCGCTCTG | 60.363 | 66.667 | 0.00 | 0.00 | 0.00 | 3.35 |
2694 | 8656 | 2.043450 | CTCCCTCCACTCCGCTCT | 60.043 | 66.667 | 0.00 | 0.00 | 0.00 | 4.09 |
2695 | 8657 | 3.844090 | GCTCCCTCCACTCCGCTC | 61.844 | 72.222 | 0.00 | 0.00 | 0.00 | 5.03 |
2699 | 8661 | 3.151022 | CTCCGCTCCCTCCACTCC | 61.151 | 72.222 | 0.00 | 0.00 | 0.00 | 3.85 |
2700 | 8662 | 2.043852 | TCTCCGCTCCCTCCACTC | 60.044 | 66.667 | 0.00 | 0.00 | 0.00 | 3.51 |
2701 | 8663 | 2.043450 | CTCTCCGCTCCCTCCACT | 60.043 | 66.667 | 0.00 | 0.00 | 0.00 | 4.00 |
2702 | 8664 | 3.151022 | CCTCTCCGCTCCCTCCAC | 61.151 | 72.222 | 0.00 | 0.00 | 0.00 | 4.02 |
2703 | 8665 | 3.347590 | TCCTCTCCGCTCCCTCCA | 61.348 | 66.667 | 0.00 | 0.00 | 0.00 | 3.86 |
2704 | 8666 | 2.520741 | CTCCTCTCCGCTCCCTCC | 60.521 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
2705 | 8667 | 3.223589 | GCTCCTCTCCGCTCCCTC | 61.224 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
2706 | 8668 | 4.851214 | GGCTCCTCTCCGCTCCCT | 62.851 | 72.222 | 0.00 | 0.00 | 0.00 | 4.20 |
2709 | 8671 | 3.141488 | TTCGGCTCCTCTCCGCTC | 61.141 | 66.667 | 0.00 | 0.00 | 46.05 | 5.03 |
2710 | 8672 | 3.453679 | GTTCGGCTCCTCTCCGCT | 61.454 | 66.667 | 0.00 | 0.00 | 46.05 | 5.52 |
2711 | 8673 | 4.856607 | CGTTCGGCTCCTCTCCGC | 62.857 | 72.222 | 0.00 | 0.00 | 46.05 | 5.54 |
2713 | 8675 | 4.856607 | CGCGTTCGGCTCCTCTCC | 62.857 | 72.222 | 0.00 | 0.00 | 40.44 | 3.71 |
2723 | 8685 | 2.025418 | AACACTAAGGCCGCGTTCG | 61.025 | 57.895 | 4.92 | 0.00 | 0.00 | 3.95 |
2724 | 8686 | 1.226030 | ACAACACTAAGGCCGCGTTC | 61.226 | 55.000 | 4.92 | 0.00 | 0.00 | 3.95 |
2725 | 8687 | 1.227734 | ACAACACTAAGGCCGCGTT | 60.228 | 52.632 | 4.92 | 3.47 | 0.00 | 4.84 |
2726 | 8688 | 1.959226 | CACAACACTAAGGCCGCGT | 60.959 | 57.895 | 4.92 | 0.00 | 0.00 | 6.01 |
2727 | 8689 | 0.668096 | TACACAACACTAAGGCCGCG | 60.668 | 55.000 | 0.00 | 0.00 | 0.00 | 6.46 |
2728 | 8690 | 1.076332 | CTACACAACACTAAGGCCGC | 58.924 | 55.000 | 0.00 | 0.00 | 0.00 | 6.53 |
2729 | 8691 | 2.066262 | CACTACACAACACTAAGGCCG | 58.934 | 52.381 | 0.00 | 0.00 | 0.00 | 6.13 |
2730 | 8692 | 1.804748 | GCACTACACAACACTAAGGCC | 59.195 | 52.381 | 0.00 | 0.00 | 0.00 | 5.19 |
2731 | 8693 | 2.489971 | TGCACTACACAACACTAAGGC | 58.510 | 47.619 | 0.00 | 0.00 | 0.00 | 4.35 |
2732 | 8694 | 4.152402 | GTGATGCACTACACAACACTAAGG | 59.848 | 45.833 | 13.26 | 0.00 | 37.05 | 2.69 |
2733 | 8695 | 4.749598 | TGTGATGCACTACACAACACTAAG | 59.250 | 41.667 | 16.94 | 0.00 | 42.72 | 2.18 |
2776 | 8738 | 1.078848 | GCGGTCTCAGCAGGAACAT | 60.079 | 57.895 | 0.00 | 0.00 | 34.19 | 2.71 |
2793 | 8755 | 6.961554 | CAGAAAATAATGTAACGACAGAAGGC | 59.038 | 38.462 | 0.00 | 0.00 | 39.50 | 4.35 |
2802 | 8764 | 8.840867 | GCTCTTTCAACAGAAAATAATGTAACG | 58.159 | 33.333 | 0.00 | 0.00 | 31.38 | 3.18 |
2817 | 8779 | 6.489603 | TCATAAATAAGGGGCTCTTTCAACA | 58.510 | 36.000 | 4.22 | 0.00 | 36.93 | 3.33 |
3014 | 8976 | 6.675987 | CAAGACAATTCTTAAGCTTCAAGCT | 58.324 | 36.000 | 5.91 | 5.91 | 46.84 | 3.74 |
3015 | 8977 | 5.344396 | GCAAGACAATTCTTAAGCTTCAAGC | 59.656 | 40.000 | 0.00 | 0.00 | 40.34 | 4.01 |
3016 | 8978 | 6.361748 | GTGCAAGACAATTCTTAAGCTTCAAG | 59.638 | 38.462 | 0.00 | 5.81 | 40.34 | 3.02 |
3017 | 8979 | 6.183360 | TGTGCAAGACAATTCTTAAGCTTCAA | 60.183 | 34.615 | 0.00 | 0.00 | 40.34 | 2.69 |
3018 | 8980 | 5.299028 | TGTGCAAGACAATTCTTAAGCTTCA | 59.701 | 36.000 | 0.00 | 0.00 | 40.34 | 3.02 |
3019 | 8981 | 5.762045 | TGTGCAAGACAATTCTTAAGCTTC | 58.238 | 37.500 | 0.00 | 0.00 | 40.34 | 3.86 |
3020 | 8982 | 5.772825 | TGTGCAAGACAATTCTTAAGCTT | 57.227 | 34.783 | 3.48 | 3.48 | 40.34 | 3.74 |
3021 | 8983 | 5.300286 | ACTTGTGCAAGACAATTCTTAAGCT | 59.700 | 36.000 | 17.62 | 0.00 | 43.78 | 3.74 |
3022 | 8984 | 5.400485 | CACTTGTGCAAGACAATTCTTAAGC | 59.600 | 40.000 | 17.62 | 0.00 | 43.78 | 3.09 |
3023 | 8985 | 6.634436 | GTCACTTGTGCAAGACAATTCTTAAG | 59.366 | 38.462 | 17.62 | 0.00 | 43.78 | 1.85 |
3024 | 8986 | 6.094742 | TGTCACTTGTGCAAGACAATTCTTAA | 59.905 | 34.615 | 17.62 | 0.00 | 43.78 | 1.85 |
3025 | 8987 | 5.588246 | TGTCACTTGTGCAAGACAATTCTTA | 59.412 | 36.000 | 17.62 | 0.00 | 43.78 | 2.10 |
3026 | 8988 | 4.398988 | TGTCACTTGTGCAAGACAATTCTT | 59.601 | 37.500 | 17.62 | 0.00 | 43.78 | 2.52 |
3027 | 8989 | 3.947196 | TGTCACTTGTGCAAGACAATTCT | 59.053 | 39.130 | 17.62 | 0.00 | 43.78 | 2.40 |
3028 | 8990 | 4.037690 | GTGTCACTTGTGCAAGACAATTC | 58.962 | 43.478 | 17.62 | 0.01 | 43.78 | 2.17 |
3029 | 8991 | 3.696051 | AGTGTCACTTGTGCAAGACAATT | 59.304 | 39.130 | 17.62 | 3.76 | 43.78 | 2.32 |
3030 | 8992 | 3.065786 | CAGTGTCACTTGTGCAAGACAAT | 59.934 | 43.478 | 17.62 | 9.50 | 43.78 | 2.71 |
3031 | 8993 | 2.419673 | CAGTGTCACTTGTGCAAGACAA | 59.580 | 45.455 | 17.62 | 0.00 | 42.55 | 3.18 |
3032 | 8994 | 2.009051 | CAGTGTCACTTGTGCAAGACA | 58.991 | 47.619 | 17.62 | 10.16 | 40.79 | 3.41 |
3033 | 8995 | 2.030946 | GTCAGTGTCACTTGTGCAAGAC | 59.969 | 50.000 | 17.62 | 2.28 | 40.79 | 3.01 |
3034 | 8996 | 2.279741 | GTCAGTGTCACTTGTGCAAGA | 58.720 | 47.619 | 17.62 | 0.00 | 40.79 | 3.02 |
3035 | 8997 | 1.331756 | GGTCAGTGTCACTTGTGCAAG | 59.668 | 52.381 | 1.67 | 10.09 | 43.79 | 4.01 |
3036 | 8998 | 1.339535 | TGGTCAGTGTCACTTGTGCAA | 60.340 | 47.619 | 1.67 | 0.00 | 0.00 | 4.08 |
3037 | 8999 | 0.251634 | TGGTCAGTGTCACTTGTGCA | 59.748 | 50.000 | 1.67 | 0.00 | 0.00 | 4.57 |
3038 | 9000 | 1.265095 | CATGGTCAGTGTCACTTGTGC | 59.735 | 52.381 | 1.67 | 0.00 | 0.00 | 4.57 |
3039 | 9001 | 2.564771 | ACATGGTCAGTGTCACTTGTG | 58.435 | 47.619 | 1.67 | 1.07 | 0.00 | 3.33 |
3040 | 9002 | 3.281727 | AACATGGTCAGTGTCACTTGT | 57.718 | 42.857 | 1.67 | 1.91 | 0.00 | 3.16 |
3041 | 9003 | 3.627123 | TCAAACATGGTCAGTGTCACTTG | 59.373 | 43.478 | 1.67 | 1.22 | 0.00 | 3.16 |
3042 | 9004 | 3.627577 | GTCAAACATGGTCAGTGTCACTT | 59.372 | 43.478 | 1.67 | 0.00 | 0.00 | 3.16 |
3043 | 9005 | 3.206150 | GTCAAACATGGTCAGTGTCACT | 58.794 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
3044 | 9006 | 2.942376 | TGTCAAACATGGTCAGTGTCAC | 59.058 | 45.455 | 0.00 | 0.00 | 0.00 | 3.67 |
3045 | 9007 | 3.274095 | TGTCAAACATGGTCAGTGTCA | 57.726 | 42.857 | 0.00 | 0.00 | 0.00 | 3.58 |
3046 | 9008 | 6.149308 | TCAATATGTCAAACATGGTCAGTGTC | 59.851 | 38.462 | 0.00 | 0.00 | 39.53 | 3.67 |
3047 | 9009 | 6.003326 | TCAATATGTCAAACATGGTCAGTGT | 58.997 | 36.000 | 0.00 | 0.00 | 39.53 | 3.55 |
3048 | 9010 | 6.499234 | TCAATATGTCAAACATGGTCAGTG | 57.501 | 37.500 | 0.00 | 0.00 | 39.53 | 3.66 |
3049 | 9011 | 5.124457 | GCTCAATATGTCAAACATGGTCAGT | 59.876 | 40.000 | 0.00 | 0.00 | 39.53 | 3.41 |
3050 | 9012 | 5.356190 | AGCTCAATATGTCAAACATGGTCAG | 59.644 | 40.000 | 0.00 | 0.00 | 39.53 | 3.51 |
3105 | 9067 | 6.237915 | GGACAAGCAACAAGAATCAAAACTTG | 60.238 | 38.462 | 0.00 | 0.00 | 45.85 | 3.16 |
3106 | 9068 | 5.812127 | GGACAAGCAACAAGAATCAAAACTT | 59.188 | 36.000 | 0.00 | 0.00 | 0.00 | 2.66 |
3116 | 9078 | 6.959639 | AAATTAAGAGGACAAGCAACAAGA | 57.040 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
3216 | 9184 | 0.037303 | CATGCACAGGGTCTCAACCT | 59.963 | 55.000 | 0.00 | 0.00 | 45.66 | 3.50 |
3217 | 9185 | 1.589716 | GCATGCACAGGGTCTCAACC | 61.590 | 60.000 | 14.21 | 0.00 | 45.65 | 3.77 |
3262 | 9230 | 3.511934 | AGAAGAGAACAATCAGCTACGGT | 59.488 | 43.478 | 0.00 | 0.00 | 0.00 | 4.83 |
3325 | 9293 | 7.918562 | GCTGTTTTTCCAAACTCATACTTTGTA | 59.081 | 33.333 | 0.00 | 0.00 | 42.61 | 2.41 |
3397 | 9365 | 3.433615 | ACTGAACACATAGAAGAAAGCGC | 59.566 | 43.478 | 0.00 | 0.00 | 0.00 | 5.92 |
3403 | 9372 | 8.342634 | GCAAAAAGTAACTGAACACATAGAAGA | 58.657 | 33.333 | 0.00 | 0.00 | 0.00 | 2.87 |
3654 | 9623 | 6.940867 | AGTAATAACTCAAGTTCCCAGGAAAC | 59.059 | 38.462 | 0.00 | 0.00 | 39.31 | 2.78 |
3820 | 9835 | 4.379374 | AGCGTTTGTGTGTACGAATAAC | 57.621 | 40.909 | 0.00 | 0.00 | 40.03 | 1.89 |
3925 | 9940 | 4.162320 | CCACAGCCTTAAGAACTCCTGATA | 59.838 | 45.833 | 3.36 | 0.00 | 0.00 | 2.15 |
3988 | 10003 | 2.959030 | GCCAGACTGGGAAGAAAAAGTT | 59.041 | 45.455 | 23.09 | 0.00 | 38.19 | 2.66 |
3991 | 10006 | 2.586425 | CAGCCAGACTGGGAAGAAAAA | 58.414 | 47.619 | 23.09 | 0.00 | 43.19 | 1.94 |
4013 | 10028 | 6.272318 | TGGAAAACATGCTTAAGAAGTGTTG | 58.728 | 36.000 | 6.67 | 0.00 | 33.67 | 3.33 |
4032 | 10047 | 5.692115 | TGATAACTGGCTCAGTATGGAAA | 57.308 | 39.130 | 8.07 | 0.00 | 44.62 | 3.13 |
4086 | 10103 | 2.422597 | TCGAACTGACGCAATGGAAAT | 58.577 | 42.857 | 0.00 | 0.00 | 0.00 | 2.17 |
4100 | 10117 | 9.988350 | CAATAAGCATAAACAAACTATCGAACT | 57.012 | 29.630 | 0.00 | 0.00 | 0.00 | 3.01 |
4101 | 10118 | 9.982291 | TCAATAAGCATAAACAAACTATCGAAC | 57.018 | 29.630 | 0.00 | 0.00 | 0.00 | 3.95 |
4126 | 10143 | 7.201530 | CGGTAGAACCTGTGTTTCAGAATAATC | 60.202 | 40.741 | 0.00 | 0.00 | 46.27 | 1.75 |
4149 | 10166 | 0.321996 | GTTCTTCTGGAGCTTCCGGT | 59.678 | 55.000 | 0.00 | 0.00 | 43.49 | 5.28 |
4152 | 10169 | 4.545208 | AACTAGTTCTTCTGGAGCTTCC | 57.455 | 45.455 | 1.12 | 0.00 | 36.84 | 3.46 |
4168 | 10185 | 1.734465 | CCAAGCAAGCTCCGAAACTAG | 59.266 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
4176 | 10193 | 1.452108 | ATACCGCCAAGCAAGCTCC | 60.452 | 57.895 | 0.00 | 0.00 | 0.00 | 4.70 |
4179 | 10196 | 1.532868 | CTATCATACCGCCAAGCAAGC | 59.467 | 52.381 | 0.00 | 0.00 | 0.00 | 4.01 |
4196 | 10213 | 4.536489 | ACAAGGGGAAGCTACAGAAACTAT | 59.464 | 41.667 | 0.00 | 0.00 | 0.00 | 2.12 |
4205 | 10222 | 2.871453 | TGGAAAACAAGGGGAAGCTAC | 58.129 | 47.619 | 0.00 | 0.00 | 0.00 | 3.58 |
4226 | 10243 | 8.420222 | TCTGATGGTTCAAAAATTGCTCTTAAA | 58.580 | 29.630 | 0.00 | 0.00 | 0.00 | 1.52 |
4227 | 10244 | 7.950512 | TCTGATGGTTCAAAAATTGCTCTTAA | 58.049 | 30.769 | 0.00 | 0.00 | 0.00 | 1.85 |
4231 | 10248 | 6.647895 | ACAATCTGATGGTTCAAAAATTGCTC | 59.352 | 34.615 | 0.00 | 0.00 | 0.00 | 4.26 |
4232 | 10249 | 6.527423 | ACAATCTGATGGTTCAAAAATTGCT | 58.473 | 32.000 | 0.00 | 0.00 | 0.00 | 3.91 |
4241 | 10258 | 6.491062 | AGATGAACAAACAATCTGATGGTTCA | 59.509 | 34.615 | 10.72 | 14.54 | 33.71 | 3.18 |
4242 | 10259 | 6.917533 | AGATGAACAAACAATCTGATGGTTC | 58.082 | 36.000 | 10.72 | 10.33 | 0.00 | 3.62 |
4248 | 10265 | 6.455647 | ACGTAGAGATGAACAAACAATCTGA | 58.544 | 36.000 | 0.00 | 0.00 | 0.00 | 3.27 |
4258 | 10275 | 7.153217 | TCAGTTTCATACGTAGAGATGAACA | 57.847 | 36.000 | 10.28 | 1.84 | 40.77 | 3.18 |
4270 | 10287 | 6.169419 | TGATGCTTTCTTCAGTTTCATACG | 57.831 | 37.500 | 0.00 | 0.00 | 0.00 | 3.06 |
4292 | 10311 | 7.220300 | CAGTTTAGCGAACTACTACAAGGTATG | 59.780 | 40.741 | 7.98 | 0.00 | 46.75 | 2.39 |
4296 | 10315 | 5.467705 | ACAGTTTAGCGAACTACTACAAGG | 58.532 | 41.667 | 7.98 | 0.00 | 46.75 | 3.61 |
4374 | 10393 | 5.200483 | TGTGTTTCTGGGATCTCAAACTTT | 58.800 | 37.500 | 10.70 | 0.00 | 31.29 | 2.66 |
4438 | 10552 | 5.453567 | AAACAAGGCTCAAGTATTTGGTC | 57.546 | 39.130 | 0.00 | 0.00 | 34.97 | 4.02 |
4487 | 10601 | 2.238646 | TGCCACGTTCCTTGATATCCTT | 59.761 | 45.455 | 0.00 | 0.00 | 0.00 | 3.36 |
4579 | 10693 | 6.276847 | CAACTACAGGGAATCTTAGTAGCAG | 58.723 | 44.000 | 0.00 | 0.00 | 36.51 | 4.24 |
4637 | 10761 | 9.405587 | GTCGAAAATAAAACCAATCTTCAATCA | 57.594 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
4638 | 10762 | 8.575454 | CGTCGAAAATAAAACCAATCTTCAATC | 58.425 | 33.333 | 0.00 | 0.00 | 0.00 | 2.67 |
4741 | 10867 | 2.569059 | CATACCAGATGCTCACCCAAG | 58.431 | 52.381 | 0.00 | 0.00 | 0.00 | 3.61 |
4767 | 10893 | 7.920151 | CACTCCAAACATGATTTAGTCAAACAA | 59.080 | 33.333 | 0.00 | 0.00 | 40.97 | 2.83 |
4771 | 10897 | 5.769662 | AGCACTCCAAACATGATTTAGTCAA | 59.230 | 36.000 | 0.00 | 0.00 | 40.97 | 3.18 |
4821 | 10947 | 7.562135 | ACTTTACACAAGACAGGTAGAAGAAA | 58.438 | 34.615 | 0.00 | 0.00 | 0.00 | 2.52 |
4822 | 10948 | 7.120923 | ACTTTACACAAGACAGGTAGAAGAA | 57.879 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
4823 | 10949 | 6.726490 | ACTTTACACAAGACAGGTAGAAGA | 57.274 | 37.500 | 0.00 | 0.00 | 0.00 | 2.87 |
4854 | 10981 | 1.669795 | GCAAACAAAGATTGGGGCGAG | 60.670 | 52.381 | 0.00 | 0.00 | 34.12 | 5.03 |
4865 | 10992 | 6.201806 | TCAAATGGTTAATTCGGCAAACAAAG | 59.798 | 34.615 | 0.00 | 0.00 | 0.00 | 2.77 |
4868 | 10995 | 4.985409 | GTCAAATGGTTAATTCGGCAAACA | 59.015 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
4875 | 11002 | 6.454318 | CGAGTCAGAGTCAAATGGTTAATTCG | 60.454 | 42.308 | 6.07 | 0.00 | 0.00 | 3.34 |
4896 | 11023 | 1.468395 | CCAAAACGGTTTTGCACGAGT | 60.468 | 47.619 | 31.19 | 2.99 | 46.58 | 4.18 |
4908 | 11035 | 3.551250 | GGGAAATGTGTGTACCAAAACGG | 60.551 | 47.826 | 0.00 | 0.00 | 42.50 | 4.44 |
4931 | 11058 | 7.606456 | ACCATACGTCATCTTCACAAATAGTTT | 59.394 | 33.333 | 0.00 | 0.00 | 0.00 | 2.66 |
4933 | 11060 | 6.640518 | ACCATACGTCATCTTCACAAATAGT | 58.359 | 36.000 | 0.00 | 0.00 | 0.00 | 2.12 |
4948 | 11075 | 6.127952 | GGGAAGTCATAGATCTACCATACGTC | 60.128 | 46.154 | 4.10 | 8.37 | 0.00 | 4.34 |
4956 | 11083 | 7.584122 | TGTTACAGGGAAGTCATAGATCTAC | 57.416 | 40.000 | 4.10 | 0.00 | 0.00 | 2.59 |
4957 | 11084 | 7.839705 | AGTTGTTACAGGGAAGTCATAGATCTA | 59.160 | 37.037 | 4.57 | 4.57 | 0.00 | 1.98 |
4958 | 11085 | 6.670027 | AGTTGTTACAGGGAAGTCATAGATCT | 59.330 | 38.462 | 0.00 | 0.00 | 0.00 | 2.75 |
4959 | 11086 | 6.879400 | AGTTGTTACAGGGAAGTCATAGATC | 58.121 | 40.000 | 0.00 | 0.00 | 0.00 | 2.75 |
4960 | 11087 | 6.875972 | AGTTGTTACAGGGAAGTCATAGAT | 57.124 | 37.500 | 0.00 | 0.00 | 0.00 | 1.98 |
4961 | 11088 | 6.464222 | CAAGTTGTTACAGGGAAGTCATAGA | 58.536 | 40.000 | 0.00 | 0.00 | 0.00 | 1.98 |
4962 | 11089 | 5.643777 | CCAAGTTGTTACAGGGAAGTCATAG | 59.356 | 44.000 | 1.45 | 0.00 | 0.00 | 2.23 |
4963 | 11090 | 5.308497 | TCCAAGTTGTTACAGGGAAGTCATA | 59.692 | 40.000 | 1.45 | 0.00 | 0.00 | 2.15 |
4964 | 11091 | 4.104102 | TCCAAGTTGTTACAGGGAAGTCAT | 59.896 | 41.667 | 1.45 | 0.00 | 0.00 | 3.06 |
4965 | 11092 | 3.456644 | TCCAAGTTGTTACAGGGAAGTCA | 59.543 | 43.478 | 1.45 | 0.00 | 0.00 | 3.41 |
4966 | 11093 | 4.065789 | CTCCAAGTTGTTACAGGGAAGTC | 58.934 | 47.826 | 1.45 | 0.00 | 31.12 | 3.01 |
4971 | 11098 | 8.840321 | CATTATTATCTCCAAGTTGTTACAGGG | 58.160 | 37.037 | 1.45 | 0.00 | 0.00 | 4.45 |
5010 | 11137 | 4.743057 | TGGTGGATCAGAGTGTTATCTG | 57.257 | 45.455 | 0.00 | 0.00 | 46.70 | 2.90 |
5018 | 11145 | 3.054802 | GGACTGAAATGGTGGATCAGAGT | 60.055 | 47.826 | 8.84 | 0.00 | 42.48 | 3.24 |
5036 | 11163 | 4.679373 | AATAATCAGCGAGATGTGGACT | 57.321 | 40.909 | 0.00 | 0.00 | 36.96 | 3.85 |
5068 | 11196 | 9.743581 | AACTCCCTCCGAAAGTAATTTAATTTA | 57.256 | 29.630 | 2.13 | 0.00 | 0.00 | 1.40 |
5072 | 11200 | 7.720515 | TCAAAACTCCCTCCGAAAGTAATTTAA | 59.279 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
5073 | 11201 | 7.173735 | GTCAAAACTCCCTCCGAAAGTAATTTA | 59.826 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
5074 | 11202 | 6.016527 | GTCAAAACTCCCTCCGAAAGTAATTT | 60.017 | 38.462 | 0.00 | 0.00 | 0.00 | 1.82 |
5075 | 11203 | 5.472478 | GTCAAAACTCCCTCCGAAAGTAATT | 59.528 | 40.000 | 0.00 | 0.00 | 0.00 | 1.40 |
5076 | 11204 | 5.001874 | GTCAAAACTCCCTCCGAAAGTAAT | 58.998 | 41.667 | 0.00 | 0.00 | 0.00 | 1.89 |
5077 | 11205 | 4.102054 | AGTCAAAACTCCCTCCGAAAGTAA | 59.898 | 41.667 | 0.00 | 0.00 | 0.00 | 2.24 |
5153 | 11281 | 1.066908 | GATCCCTCTTCTGCTCGTGAG | 59.933 | 57.143 | 0.00 | 0.00 | 0.00 | 3.51 |
5165 | 11299 | 3.618351 | CTGCTTTGATGTTGATCCCTCT | 58.382 | 45.455 | 0.00 | 0.00 | 0.00 | 3.69 |
5196 | 11331 | 2.398554 | CGCCATTGTTGGACCTCCG | 61.399 | 63.158 | 0.00 | 0.00 | 46.92 | 4.63 |
5202 | 11337 | 0.322456 | CCTTCTCCGCCATTGTTGGA | 60.322 | 55.000 | 0.00 | 0.00 | 46.92 | 3.53 |
5217 | 11352 | 2.230660 | CCAAACACCTTCACTCCCTTC | 58.769 | 52.381 | 0.00 | 0.00 | 0.00 | 3.46 |
5218 | 11353 | 1.754201 | GCCAAACACCTTCACTCCCTT | 60.754 | 52.381 | 0.00 | 0.00 | 0.00 | 3.95 |
5219 | 11354 | 0.178990 | GCCAAACACCTTCACTCCCT | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 4.20 |
5220 | 11355 | 0.467290 | TGCCAAACACCTTCACTCCC | 60.467 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
5221 | 11356 | 1.270550 | CATGCCAAACACCTTCACTCC | 59.729 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
5222 | 11357 | 1.956477 | ACATGCCAAACACCTTCACTC | 59.044 | 47.619 | 0.00 | 0.00 | 0.00 | 3.51 |
5223 | 11358 | 1.682854 | CACATGCCAAACACCTTCACT | 59.317 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
5224 | 11359 | 1.269726 | CCACATGCCAAACACCTTCAC | 60.270 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
5225 | 11360 | 1.039068 | CCACATGCCAAACACCTTCA | 58.961 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
5278 | 11413 | 4.821589 | GACGCCCTTCAGCCGGAG | 62.822 | 72.222 | 5.05 | 0.00 | 0.00 | 4.63 |
5283 | 11418 | 3.766691 | TACCCGACGCCCTTCAGC | 61.767 | 66.667 | 0.00 | 0.00 | 0.00 | 4.26 |
5284 | 11419 | 2.183555 | GTACCCGACGCCCTTCAG | 59.816 | 66.667 | 0.00 | 0.00 | 0.00 | 3.02 |
5301 | 11436 | 1.343147 | GTCCTCGTCGACGTACTCG | 59.657 | 63.158 | 34.40 | 18.85 | 44.44 | 4.18 |
5302 | 11437 | 0.739112 | AGGTCCTCGTCGACGTACTC | 60.739 | 60.000 | 34.40 | 22.58 | 40.80 | 2.59 |
5304 | 11439 | 1.712663 | GAGGTCCTCGTCGACGTAC | 59.287 | 63.158 | 34.40 | 27.81 | 40.80 | 3.67 |
5305 | 11440 | 4.192000 | GAGGTCCTCGTCGACGTA | 57.808 | 61.111 | 34.40 | 21.01 | 40.80 | 3.57 |
5314 | 11449 | 2.125350 | CTTGCTGGCGAGGTCCTC | 60.125 | 66.667 | 9.05 | 9.05 | 0.00 | 3.71 |
5315 | 11450 | 2.604686 | TCTTGCTGGCGAGGTCCT | 60.605 | 61.111 | 9.62 | 0.00 | 0.00 | 3.85 |
5316 | 11451 | 2.125350 | CTCTTGCTGGCGAGGTCC | 60.125 | 66.667 | 9.62 | 0.00 | 0.00 | 4.46 |
5317 | 11452 | 2.817396 | GCTCTTGCTGGCGAGGTC | 60.817 | 66.667 | 9.62 | 0.00 | 36.03 | 3.85 |
5348 | 11483 | 4.572571 | TGGTCACCGGGTTGTGGC | 62.573 | 66.667 | 6.32 | 0.00 | 40.12 | 5.01 |
5349 | 11484 | 1.896660 | CTTGGTCACCGGGTTGTGG | 60.897 | 63.158 | 6.32 | 0.00 | 36.87 | 4.17 |
5350 | 11485 | 0.464735 | TTCTTGGTCACCGGGTTGTG | 60.465 | 55.000 | 6.32 | 0.00 | 37.59 | 3.33 |
5351 | 11486 | 0.179029 | CTTCTTGGTCACCGGGTTGT | 60.179 | 55.000 | 6.32 | 0.00 | 0.00 | 3.32 |
5352 | 11487 | 0.889186 | CCTTCTTGGTCACCGGGTTG | 60.889 | 60.000 | 6.32 | 0.00 | 0.00 | 3.77 |
5353 | 11488 | 1.454539 | CCTTCTTGGTCACCGGGTT | 59.545 | 57.895 | 6.32 | 0.00 | 0.00 | 4.11 |
5354 | 11489 | 3.157680 | CCTTCTTGGTCACCGGGT | 58.842 | 61.111 | 6.32 | 0.00 | 0.00 | 5.28 |
5400 | 12654 | 1.300233 | GATGGTGGACTCGGCGATC | 60.300 | 63.158 | 11.27 | 10.31 | 0.00 | 3.69 |
5496 | 12750 | 1.002011 | GAACCTGGCCCAGAACCTC | 60.002 | 63.158 | 13.74 | 0.00 | 32.44 | 3.85 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.