Multiple sequence alignment - TraesCS5D01G253300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G253300 chr5D 100.000 1448 0 0 1 1448 360128763 360130210 0.000000e+00 2675.0
1 TraesCS5D01G253300 chr5D 100.000 1380 0 0 1916 3295 360130678 360132057 0.000000e+00 2549.0
2 TraesCS5D01G253300 chr5D 95.291 446 20 1 1916 2360 556477134 556476689 0.000000e+00 706.0
3 TraesCS5D01G253300 chr5D 97.122 278 6 2 21 297 556478515 556478239 4.980000e-128 468.0
4 TraesCS5D01G253300 chr5D 95.392 217 10 0 3079 3295 242505405 242505621 2.430000e-91 346.0
5 TraesCS5D01G253300 chr1A 95.581 973 36 5 1 968 520173879 520172909 0.000000e+00 1552.0
6 TraesCS5D01G253300 chr1A 94.931 217 11 0 3079 3295 520163384 520163168 1.130000e-89 340.0
7 TraesCS5D01G253300 chr1A 94.578 166 6 3 44 208 49128947 49128784 1.520000e-63 254.0
8 TraesCS5D01G253300 chr1A 94.578 166 6 3 44 208 364162596 364162759 1.520000e-63 254.0
9 TraesCS5D01G253300 chr1A 94.969 159 7 1 44 201 532666895 532666737 7.060000e-62 248.0
10 TraesCS5D01G253300 chr1A 95.000 120 6 0 1329 1448 520164185 520164066 4.340000e-44 189.0
11 TraesCS5D01G253300 chr1A 96.053 76 3 0 126 201 7417364 7417439 1.240000e-24 124.0
12 TraesCS5D01G253300 chr1A 94.203 69 3 1 2728 2795 454499927 454499859 1.620000e-18 104.0
13 TraesCS5D01G253300 chr1A 96.721 61 2 0 230 290 49128785 49128725 5.820000e-18 102.0
14 TraesCS5D01G253300 chr1A 96.721 61 2 0 230 290 532666732 532666672 5.820000e-18 102.0
15 TraesCS5D01G253300 chr1A 95.082 61 3 0 230 290 364162758 364162818 2.710000e-16 97.1
16 TraesCS5D01G253300 chr6D 96.875 704 20 2 2 703 372423634 372422931 0.000000e+00 1177.0
17 TraesCS5D01G253300 chr6D 92.588 823 36 17 638 1435 61990638 61991460 0.000000e+00 1158.0
18 TraesCS5D01G253300 chr6D 97.931 435 7 2 1 434 61990190 61990623 0.000000e+00 752.0
19 TraesCS5D01G253300 chr6D 94.889 450 15 3 1916 2360 372369649 372369203 0.000000e+00 697.0
20 TraesCS5D01G253300 chr6D 95.909 220 9 0 3076 3295 61992178 61992397 1.120000e-94 357.0
21 TraesCS5D01G253300 chr6D 94.231 156 5 2 529 681 450543163 450543317 5.500000e-58 235.0
22 TraesCS5D01G253300 chr6D 96.324 136 5 0 545 680 30919852 30919987 1.190000e-54 224.0
23 TraesCS5D01G253300 chr6D 92.810 153 7 2 532 681 58716005 58716156 5.540000e-53 219.0
24 TraesCS5D01G253300 chr3D 93.325 809 26 19 667 1448 577470069 577469262 0.000000e+00 1170.0
25 TraesCS5D01G253300 chr3D 96.552 551 19 0 130 680 96221241 96221791 0.000000e+00 913.0
26 TraesCS5D01G253300 chr3D 95.067 446 21 1 1916 2360 83649710 83650155 0.000000e+00 701.0
27 TraesCS5D01G253300 chr3D 95.067 446 21 1 1916 2360 332616098 332616543 0.000000e+00 701.0
28 TraesCS5D01G253300 chr3D 97.340 376 10 0 2356 2731 593801370 593801745 9.970000e-180 640.0
29 TraesCS5D01G253300 chr3D 97.535 284 6 1 1 283 577479177 577478894 4.940000e-133 484.0
30 TraesCS5D01G253300 chr3D 95.683 278 10 2 21 297 83648285 83648561 2.330000e-121 446.0
31 TraesCS5D01G253300 chr3D 94.245 278 12 2 21 297 416996695 416996969 3.930000e-114 422.0
32 TraesCS5D01G253300 chr3D 90.102 293 25 4 2793 3082 251291482 251291773 8.630000e-101 377.0
33 TraesCS5D01G253300 chr3D 94.545 220 12 0 3076 3295 96252626 96252845 1.130000e-89 340.0
34 TraesCS5D01G253300 chr3D 96.795 156 5 0 279 434 577470250 577470095 9.070000e-66 261.0
35 TraesCS5D01G253300 chr3D 97.794 136 3 0 545 680 83648551 83648686 5.500000e-58 235.0
36 TraesCS5D01G253300 chr3D 97.794 136 3 0 545 680 332614874 332615009 5.500000e-58 235.0
37 TraesCS5D01G253300 chr3D 97.794 136 3 0 545 680 416996959 416997094 5.500000e-58 235.0
38 TraesCS5D01G253300 chr3D 73.506 385 68 26 2360 2726 614545012 614545380 7.470000e-22 115.0
39 TraesCS5D01G253300 chr4D 91.686 854 28 20 638 1448 506594985 506595838 0.000000e+00 1144.0
40 TraesCS5D01G253300 chr4D 95.291 446 20 1 1916 2360 485139255 485138810 0.000000e+00 706.0
41 TraesCS5D01G253300 chr4D 96.043 278 10 1 21 297 76231329 76231052 5.010000e-123 451.0
42 TraesCS5D01G253300 chr4D 91.039 279 23 2 20 296 74612796 74612518 3.100000e-100 375.0
43 TraesCS5D01G253300 chr4D 94.931 217 11 0 3079 3295 4334182 4333966 1.130000e-89 340.0
44 TraesCS5D01G253300 chr4D 97.059 136 4 0 545 680 369990285 369990150 2.560000e-56 230.0
45 TraesCS5D01G253300 chr4D 96.324 136 5 0 545 680 246480929 246481064 1.190000e-54 224.0
46 TraesCS5D01G253300 chr4D 96.324 136 5 0 545 680 485158853 485158718 1.190000e-54 224.0
47 TraesCS5D01G253300 chr4D 95.588 136 6 0 545 680 159758025 159757890 5.540000e-53 219.0
48 TraesCS5D01G253300 chr4D 94.783 115 6 0 320 434 506594825 506594939 2.610000e-41 180.0
49 TraesCS5D01G253300 chr4D 96.907 97 3 0 584 680 4337445 4337349 2.630000e-36 163.0
50 TraesCS5D01G253300 chr4D 94.845 97 5 0 584 680 33001815 33001911 5.690000e-33 152.0
51 TraesCS5D01G253300 chr4D 86.923 130 10 6 337 459 74612353 74612224 4.430000e-29 139.0
52 TraesCS5D01G253300 chr4D 95.652 69 2 1 2728 2795 369988614 369988546 3.480000e-20 110.0
53 TraesCS5D01G253300 chr4D 95.385 65 3 0 2728 2792 4334239 4334175 1.620000e-18 104.0
54 TraesCS5D01G253300 chr4D 95.385 65 3 0 2728 2792 33037382 33037446 1.620000e-18 104.0
55 TraesCS5D01G253300 chr4D 95.385 65 3 0 2728 2792 76215356 76215292 1.620000e-18 104.0
56 TraesCS5D01G253300 chr4D 95.918 49 2 0 545 593 225245945 225245993 2.730000e-11 80.5
57 TraesCS5D01G253300 chr1D 96.243 692 24 2 638 1328 473353825 473354515 0.000000e+00 1133.0
58 TraesCS5D01G253300 chr1D 95.516 446 19 1 1916 2360 414338060 414338505 0.000000e+00 712.0
59 TraesCS5D01G253300 chr1D 95.683 278 11 1 21 297 483536928 483537205 2.330000e-121 446.0
60 TraesCS5D01G253300 chr1D 97.794 136 3 0 545 680 382484081 382484216 5.500000e-58 235.0
61 TraesCS5D01G253300 chr1D 97.059 136 4 0 545 680 483537195 483537330 2.560000e-56 230.0
62 TraesCS5D01G253300 chr1D 98.214 112 2 0 323 434 104862168 104862279 2.590000e-46 196.0
63 TraesCS5D01G253300 chr1D 96.522 115 4 0 320 434 473353665 473353779 1.210000e-44 191.0
64 TraesCS5D01G253300 chr7D 92.547 805 31 19 672 1448 11604280 11605083 0.000000e+00 1127.0
65 TraesCS5D01G253300 chr7D 98.608 431 5 1 1 430 572475425 572475855 0.000000e+00 761.0
66 TraesCS5D01G253300 chr7D 95.740 446 18 1 1916 2360 572476912 572477357 0.000000e+00 717.0
67 TraesCS5D01G253300 chr7D 94.843 446 22 1 1916 2360 79622376 79622821 0.000000e+00 695.0
68 TraesCS5D01G253300 chr7D 96.751 277 9 0 21 297 54880853 54881129 2.320000e-126 462.0
69 TraesCS5D01G253300 chr7D 96.390 277 10 0 21 297 54865438 54865714 1.080000e-124 457.0
70 TraesCS5D01G253300 chr7D 95.455 220 10 0 3076 3295 572477409 572477628 5.230000e-93 351.0
71 TraesCS5D01G253300 chr7D 98.529 136 2 0 545 680 129104101 129103966 1.180000e-59 241.0
72 TraesCS5D01G253300 chr7D 83.799 179 20 9 2554 2726 14580363 14580188 9.460000e-36 161.0
73 TraesCS5D01G253300 chr4B 92.040 804 37 17 672 1448 626051759 626052562 0.000000e+00 1105.0
74 TraesCS5D01G253300 chr4B 95.025 402 20 0 274 675 267697437 267697838 1.670000e-177 632.0
75 TraesCS5D01G253300 chr4B 89.860 286 21 5 19 296 106976676 106976391 8.690000e-96 361.0
76 TraesCS5D01G253300 chr4B 92.672 232 13 2 21 249 192140645 192140875 6.820000e-87 331.0
77 TraesCS5D01G253300 chr4B 93.564 202 12 1 1 201 267697240 267697441 1.920000e-77 300.0
78 TraesCS5D01G253300 chr4B 92.233 103 4 2 376 477 106976179 106976080 3.430000e-30 143.0
79 TraesCS5D01G253300 chr4B 97.143 35 1 0 297 331 106976293 106976259 3.550000e-05 60.2
80 TraesCS5D01G253300 chr2A 95.888 681 27 1 1 680 59582827 59583507 0.000000e+00 1101.0
81 TraesCS5D01G253300 chr2A 95.291 446 20 1 1916 2360 360757154 360756709 0.000000e+00 706.0
82 TraesCS5D01G253300 chr2A 95.876 291 9 3 9 297 360762485 360762196 4.980000e-128 468.0
83 TraesCS5D01G253300 chr2A 95.392 217 10 0 3079 3295 360756654 360756438 2.430000e-91 346.0
84 TraesCS5D01G253300 chr2A 94.203 69 3 1 2728 2795 360756711 360756643 1.620000e-18 104.0
85 TraesCS5D01G253300 chr4A 91.885 801 36 20 675 1448 8970157 8969359 0.000000e+00 1092.0
86 TraesCS5D01G253300 chr4A 95.029 684 27 3 1 680 676926785 676927465 0.000000e+00 1068.0
87 TraesCS5D01G253300 chr4A 95.000 120 6 0 1329 1448 646062726 646062607 4.340000e-44 189.0
88 TraesCS5D01G253300 chr4A 96.923 65 2 0 2728 2792 639231860 639231924 3.480000e-20 110.0
89 TraesCS5D01G253300 chr2B 94.348 690 24 5 4 680 801167806 801167119 0.000000e+00 1044.0
90 TraesCS5D01G253300 chr2B 91.547 769 41 16 675 1435 801167000 801166248 0.000000e+00 1038.0
91 TraesCS5D01G253300 chr2B 96.250 400 15 0 281 680 670847989 670848388 0.000000e+00 656.0
92 TraesCS5D01G253300 chr2B 95.000 120 6 0 1329 1448 331057137 331057018 4.340000e-44 189.0
93 TraesCS5D01G253300 chr2B 95.000 120 6 0 1329 1448 799924654 799924773 4.340000e-44 189.0
94 TraesCS5D01G253300 chr5A 95.008 661 31 2 675 1333 431024135 431023475 0.000000e+00 1037.0
95 TraesCS5D01G253300 chr5A 93.539 681 24 5 1 680 683120148 683119487 0.000000e+00 996.0
96 TraesCS5D01G253300 chr5A 95.392 217 10 0 3079 3295 683112072 683111856 2.430000e-91 346.0
97 TraesCS5D01G253300 chr5A 78.358 134 21 5 2358 2490 471476166 471476292 2.730000e-11 80.5
98 TraesCS5D01G253300 chr5A 79.798 99 15 3 2360 2456 324509263 324509358 2.120000e-07 67.6
99 TraesCS5D01G253300 chr7A 97.112 277 7 1 158 434 46039111 46039386 1.790000e-127 466.0
100 TraesCS5D01G253300 chr7A 92.759 290 20 1 2793 3081 704890111 704890400 5.090000e-113 418.0
101 TraesCS5D01G253300 chr7A 90.033 301 24 6 2793 3090 730896153 730896450 5.160000e-103 385.0
102 TraesCS5D01G253300 chr7A 81.250 176 28 5 2554 2725 245929704 245929878 1.590000e-28 137.0
103 TraesCS5D01G253300 chrUn 92.334 287 21 1 2793 3078 42262231 42261945 1.100000e-109 407.0
104 TraesCS5D01G253300 chrUn 92.014 288 22 1 2793 3079 38969291 38969578 1.420000e-108 403.0
105 TraesCS5D01G253300 chrUn 90.657 289 26 1 2792 3079 61827202 61826914 1.860000e-102 383.0
106 TraesCS5D01G253300 chrUn 97.500 80 2 0 601 680 104734777 104734698 1.590000e-28 137.0
107 TraesCS5D01G253300 chrUn 92.045 88 7 0 532 619 216134351 216134264 1.240000e-24 124.0
108 TraesCS5D01G253300 chrUn 95.385 65 3 0 2728 2792 104733333 104733269 1.620000e-18 104.0
109 TraesCS5D01G253300 chr1B 91.753 291 22 2 2795 3084 524488155 524487866 1.420000e-108 403.0
110 TraesCS5D01G253300 chr1B 91.667 288 21 3 2793 3078 21355723 21355437 2.380000e-106 396.0
111 TraesCS5D01G253300 chr1B 95.000 120 6 0 1329 1448 94688320 94688439 4.340000e-44 189.0
112 TraesCS5D01G253300 chr1B 95.000 120 6 0 1329 1448 575702495 575702614 4.340000e-44 189.0
113 TraesCS5D01G253300 chr3B 90.972 288 23 3 2793 3078 683678481 683678767 5.160000e-103 385.0
114 TraesCS5D01G253300 chr3B 96.923 65 2 0 2728 2792 434688346 434688282 3.480000e-20 110.0
115 TraesCS5D01G253300 chr2D 95.023 221 10 1 3076 3295 418802991 418803211 2.430000e-91 346.0
116 TraesCS5D01G253300 chr2D 98.214 112 2 0 323 434 418779454 418779565 2.590000e-46 196.0
117 TraesCS5D01G253300 chr2D 95.000 120 6 0 1329 1448 481030722 481030841 4.340000e-44 189.0
118 TraesCS5D01G253300 chr6B 92.949 156 7 2 529 681 125715565 125715719 1.190000e-54 224.0
119 TraesCS5D01G253300 chr5B 95.000 120 6 0 1329 1448 93066653 93066772 4.340000e-44 189.0
120 TraesCS5D01G253300 chr5B 80.380 158 27 4 2362 2518 597329975 597329821 2.080000e-22 117.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G253300 chr5D 360128763 360132057 3294 False 2612.000000 2675 100.000000 1 3295 2 chr5D.!!$F2 3294
1 TraesCS5D01G253300 chr5D 556476689 556478515 1826 True 587.000000 706 96.206500 21 2360 2 chr5D.!!$R1 2339
2 TraesCS5D01G253300 chr1A 520172909 520173879 970 True 1552.000000 1552 95.581000 1 968 1 chr1A.!!$R2 967
3 TraesCS5D01G253300 chr1A 520163168 520164185 1017 True 264.500000 340 94.965500 1329 3295 2 chr1A.!!$R4 1966
4 TraesCS5D01G253300 chr6D 372422931 372423634 703 True 1177.000000 1177 96.875000 2 703 1 chr6D.!!$R2 701
5 TraesCS5D01G253300 chr6D 61990190 61992397 2207 False 755.666667 1158 95.476000 1 3295 3 chr6D.!!$F4 3294
6 TraesCS5D01G253300 chr3D 96221241 96221791 550 False 913.000000 913 96.552000 130 680 1 chr3D.!!$F1 550
7 TraesCS5D01G253300 chr3D 577469262 577470250 988 True 715.500000 1170 95.060000 279 1448 2 chr3D.!!$R2 1169
8 TraesCS5D01G253300 chr3D 332614874 332616543 1669 False 468.000000 701 96.430500 545 2360 2 chr3D.!!$F7 1815
9 TraesCS5D01G253300 chr3D 83648285 83650155 1870 False 460.666667 701 96.181333 21 2360 3 chr3D.!!$F6 2339
10 TraesCS5D01G253300 chr4D 506594825 506595838 1013 False 662.000000 1144 93.234500 320 1448 2 chr4D.!!$F5 1128
11 TraesCS5D01G253300 chr4D 74612224 74612796 572 True 257.000000 375 88.981000 20 459 2 chr4D.!!$R7 439
12 TraesCS5D01G253300 chr4D 4333966 4337445 3479 True 202.333333 340 95.741000 584 3295 3 chr4D.!!$R6 2711
13 TraesCS5D01G253300 chr1D 473353665 473354515 850 False 662.000000 1133 96.382500 320 1328 2 chr1D.!!$F4 1008
14 TraesCS5D01G253300 chr7D 11604280 11605083 803 False 1127.000000 1127 92.547000 672 1448 1 chr7D.!!$F1 776
15 TraesCS5D01G253300 chr7D 572475425 572477628 2203 False 609.666667 761 96.601000 1 3295 3 chr7D.!!$F5 3294
16 TraesCS5D01G253300 chr4B 626051759 626052562 803 False 1105.000000 1105 92.040000 672 1448 1 chr4B.!!$F2 776
17 TraesCS5D01G253300 chr4B 267697240 267697838 598 False 466.000000 632 94.294500 1 675 2 chr4B.!!$F3 674
18 TraesCS5D01G253300 chr2A 59582827 59583507 680 False 1101.000000 1101 95.888000 1 680 1 chr2A.!!$F1 679
19 TraesCS5D01G253300 chr2A 360756438 360757154 716 True 385.333333 706 94.962000 1916 3295 3 chr2A.!!$R2 1379
20 TraesCS5D01G253300 chr4A 8969359 8970157 798 True 1092.000000 1092 91.885000 675 1448 1 chr4A.!!$R1 773
21 TraesCS5D01G253300 chr4A 676926785 676927465 680 False 1068.000000 1068 95.029000 1 680 1 chr4A.!!$F2 679
22 TraesCS5D01G253300 chr2B 801166248 801167806 1558 True 1041.000000 1044 92.947500 4 1435 2 chr2B.!!$R2 1431
23 TraesCS5D01G253300 chr5A 431023475 431024135 660 True 1037.000000 1037 95.008000 675 1333 1 chr5A.!!$R1 658
24 TraesCS5D01G253300 chr5A 683119487 683120148 661 True 996.000000 996 93.539000 1 680 1 chr5A.!!$R3 679

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
363 503 1.068352 AGGGCTGGGAGTTGTCCTTT 61.068 55.0 0.0 0.0 43.36 3.11 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2360 4541 1.456705 TCACCAACCAAACAGCCCC 60.457 57.895 0.0 0.0 0.0 5.8 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
72 73 4.764823 TGTTAGTGAGCCCATTTTTGGTAG 59.235 41.667 0.00 0.00 0.00 3.18
126 141 7.070571 AGAGAGTTGTATCTGATCTAAAAGGGG 59.929 40.741 0.00 0.00 0.00 4.79
150 166 7.094631 GGGGTGTTTGCCTTTTATAGTTTTAG 58.905 38.462 0.00 0.00 0.00 1.85
240 256 6.481976 TCGTGCTGTTTTGAAAGATTCTAAGA 59.518 34.615 0.00 0.00 0.00 2.10
363 503 1.068352 AGGGCTGGGAGTTGTCCTTT 61.068 55.000 0.00 0.00 43.36 3.11
559 711 4.026886 GGCTGTTTTTGAACTACTTTTGCG 60.027 41.667 0.00 0.00 0.00 4.85
1085 1371 4.040829 TGAGTTGATCAGCTTCTCCTTCAA 59.959 41.667 13.75 0.00 32.77 2.69
1097 1383 4.696479 TCTCCTTCAAAGCAGAAAGACT 57.304 40.909 0.00 0.00 0.00 3.24
1123 2997 1.735018 TGGCCGTCATTTATGTCAACG 59.265 47.619 0.00 0.00 0.00 4.10
1162 3045 4.151121 AGATGATGAGGATGATGACGACT 58.849 43.478 0.00 0.00 0.00 4.18
1163 3046 4.588106 AGATGATGAGGATGATGACGACTT 59.412 41.667 0.00 0.00 0.00 3.01
1221 3104 1.371183 CGAGGAGGAGGTGTGCAAA 59.629 57.895 0.00 0.00 0.00 3.68
1230 3113 2.359900 GAGGTGTGCAAACTATGGGAG 58.640 52.381 7.04 0.00 0.00 4.30
1329 3213 5.942826 TGTCATGGTATGTTGCATTTACTGA 59.057 36.000 0.00 0.00 0.00 3.41
1330 3214 6.093909 TGTCATGGTATGTTGCATTTACTGAG 59.906 38.462 0.00 0.00 0.00 3.35
1331 3215 6.094048 GTCATGGTATGTTGCATTTACTGAGT 59.906 38.462 0.00 0.00 0.00 3.41
1332 3216 7.279981 GTCATGGTATGTTGCATTTACTGAGTA 59.720 37.037 0.00 0.00 0.00 2.59
1429 3608 7.881142 AGAGTCCGATGATATATATGCTTAGC 58.119 38.462 0.00 0.00 0.00 3.09
2073 4253 6.097554 CCTATCTGAGAGTTGTGGTATCAAGT 59.902 42.308 0.00 0.00 34.23 3.16
2111 4291 1.523758 CTGGAATATGCCTTACCGCC 58.476 55.000 0.11 0.00 0.00 6.13
2140 4320 0.103572 GTCACCACCTGTGTGTACGT 59.896 55.000 0.00 0.00 45.61 3.57
2239 4419 6.912951 TGGACAGGCTATCCTAATTACTAC 57.087 41.667 13.94 0.00 41.93 2.73
2362 4543 8.993404 AGTATGACTACCTAGTAAACTTAGGG 57.007 38.462 3.60 3.94 36.50 3.53
2363 4544 8.003629 AGTATGACTACCTAGTAAACTTAGGGG 58.996 40.741 3.60 0.00 36.50 4.79
2364 4545 4.958581 TGACTACCTAGTAAACTTAGGGGC 59.041 45.833 3.60 0.00 36.50 5.80
2365 4546 5.207354 GACTACCTAGTAAACTTAGGGGCT 58.793 45.833 3.60 0.00 36.50 5.19
2366 4547 4.961099 ACTACCTAGTAAACTTAGGGGCTG 59.039 45.833 3.60 0.00 34.13 4.85
2367 4548 3.799719 ACCTAGTAAACTTAGGGGCTGT 58.200 45.455 3.60 0.00 35.36 4.40
2368 4549 4.173594 ACCTAGTAAACTTAGGGGCTGTT 58.826 43.478 3.60 0.00 35.36 3.16
2369 4550 4.600547 ACCTAGTAAACTTAGGGGCTGTTT 59.399 41.667 3.60 0.00 37.60 2.83
2370 4551 4.941873 CCTAGTAAACTTAGGGGCTGTTTG 59.058 45.833 0.00 0.00 35.77 2.93
2371 4552 3.763057 AGTAAACTTAGGGGCTGTTTGG 58.237 45.455 0.00 0.00 35.77 3.28
2372 4553 2.767644 AAACTTAGGGGCTGTTTGGT 57.232 45.000 0.00 0.00 33.36 3.67
2373 4554 2.767644 AACTTAGGGGCTGTTTGGTT 57.232 45.000 0.00 0.00 0.00 3.67
2374 4555 1.995376 ACTTAGGGGCTGTTTGGTTG 58.005 50.000 0.00 0.00 0.00 3.77
2375 4556 1.256812 CTTAGGGGCTGTTTGGTTGG 58.743 55.000 0.00 0.00 0.00 3.77
2376 4557 0.558712 TTAGGGGCTGTTTGGTTGGT 59.441 50.000 0.00 0.00 0.00 3.67
2377 4558 0.178975 TAGGGGCTGTTTGGTTGGTG 60.179 55.000 0.00 0.00 0.00 4.17
2378 4559 1.456705 GGGGCTGTTTGGTTGGTGA 60.457 57.895 0.00 0.00 0.00 4.02
2379 4560 1.739667 GGGCTGTTTGGTTGGTGAC 59.260 57.895 0.00 0.00 0.00 3.67
2387 4568 4.065110 GGTTGGTGACCTGAGCAC 57.935 61.111 2.11 0.00 45.55 4.40
2392 4573 2.359230 GTGACCTGAGCACCCTGC 60.359 66.667 0.00 0.00 45.46 4.85
2393 4574 3.640407 TGACCTGAGCACCCTGCC 61.640 66.667 0.00 0.00 46.52 4.85
2394 4575 3.325753 GACCTGAGCACCCTGCCT 61.326 66.667 0.00 0.00 46.52 4.75
2395 4576 3.618780 GACCTGAGCACCCTGCCTG 62.619 68.421 0.00 0.00 46.52 4.85
2396 4577 3.324930 CCTGAGCACCCTGCCTGA 61.325 66.667 0.00 0.00 46.52 3.86
2397 4578 2.268280 CTGAGCACCCTGCCTGAG 59.732 66.667 0.00 0.00 46.52 3.35
2398 4579 2.203832 TGAGCACCCTGCCTGAGA 60.204 61.111 0.00 0.00 46.52 3.27
2399 4580 1.834856 CTGAGCACCCTGCCTGAGAA 61.835 60.000 0.00 0.00 46.52 2.87
2400 4581 1.376466 GAGCACCCTGCCTGAGAAA 59.624 57.895 0.00 0.00 46.52 2.52
2401 4582 0.250901 GAGCACCCTGCCTGAGAAAA 60.251 55.000 0.00 0.00 46.52 2.29
2402 4583 0.185901 AGCACCCTGCCTGAGAAAAA 59.814 50.000 0.00 0.00 46.52 1.94
2403 4584 1.203100 AGCACCCTGCCTGAGAAAAAT 60.203 47.619 0.00 0.00 46.52 1.82
2404 4585 1.067354 GCACCCTGCCTGAGAAAAATG 60.067 52.381 0.00 0.00 37.42 2.32
2405 4586 1.547372 CACCCTGCCTGAGAAAAATGG 59.453 52.381 0.00 0.00 0.00 3.16
2406 4587 1.428912 ACCCTGCCTGAGAAAAATGGA 59.571 47.619 0.00 0.00 0.00 3.41
2407 4588 1.821136 CCCTGCCTGAGAAAAATGGAC 59.179 52.381 0.00 0.00 0.00 4.02
2408 4589 1.470098 CCTGCCTGAGAAAAATGGACG 59.530 52.381 0.00 0.00 0.00 4.79
2409 4590 0.881118 TGCCTGAGAAAAATGGACGC 59.119 50.000 0.00 0.00 0.00 5.19
2410 4591 0.171231 GCCTGAGAAAAATGGACGCC 59.829 55.000 0.00 0.00 0.00 5.68
2411 4592 1.826385 CCTGAGAAAAATGGACGCCT 58.174 50.000 0.00 0.00 0.00 5.52
2412 4593 1.470098 CCTGAGAAAAATGGACGCCTG 59.530 52.381 0.00 0.00 0.00 4.85
2413 4594 2.426522 CTGAGAAAAATGGACGCCTGA 58.573 47.619 0.00 0.00 0.00 3.86
2414 4595 3.012518 CTGAGAAAAATGGACGCCTGAT 58.987 45.455 0.00 0.00 0.00 2.90
2415 4596 4.191544 CTGAGAAAAATGGACGCCTGATA 58.808 43.478 0.00 0.00 0.00 2.15
2416 4597 4.191544 TGAGAAAAATGGACGCCTGATAG 58.808 43.478 0.00 0.00 0.00 2.08
2417 4598 4.192317 GAGAAAAATGGACGCCTGATAGT 58.808 43.478 0.00 0.00 0.00 2.12
2418 4599 4.589908 AGAAAAATGGACGCCTGATAGTT 58.410 39.130 0.00 0.00 0.00 2.24
2419 4600 4.396166 AGAAAAATGGACGCCTGATAGTTG 59.604 41.667 0.00 0.00 0.00 3.16
2420 4601 1.668419 AATGGACGCCTGATAGTTGC 58.332 50.000 0.00 0.00 0.00 4.17
2421 4602 0.179045 ATGGACGCCTGATAGTTGCC 60.179 55.000 0.00 0.00 0.00 4.52
2422 4603 1.883084 GGACGCCTGATAGTTGCCG 60.883 63.158 0.00 0.00 0.00 5.69
2423 4604 1.883084 GACGCCTGATAGTTGCCGG 60.883 63.158 0.00 0.00 0.00 6.13
2424 4605 2.292794 GACGCCTGATAGTTGCCGGA 62.293 60.000 5.05 0.00 0.00 5.14
2425 4606 1.592669 CGCCTGATAGTTGCCGGAG 60.593 63.158 5.05 0.00 0.00 4.63
2439 4620 3.888093 CGGAGGTTCTCGTGACTTT 57.112 52.632 0.00 0.00 0.00 2.66
2440 4621 2.150397 CGGAGGTTCTCGTGACTTTT 57.850 50.000 0.00 0.00 0.00 2.27
2441 4622 1.792949 CGGAGGTTCTCGTGACTTTTG 59.207 52.381 0.00 0.00 0.00 2.44
2442 4623 1.531578 GGAGGTTCTCGTGACTTTTGC 59.468 52.381 0.00 0.00 0.00 3.68
2443 4624 1.531578 GAGGTTCTCGTGACTTTTGCC 59.468 52.381 0.00 0.00 0.00 4.52
2444 4625 1.141053 AGGTTCTCGTGACTTTTGCCT 59.859 47.619 0.00 0.00 0.00 4.75
2445 4626 1.264288 GGTTCTCGTGACTTTTGCCTG 59.736 52.381 0.00 0.00 0.00 4.85
2446 4627 0.944386 TTCTCGTGACTTTTGCCTGC 59.056 50.000 0.00 0.00 0.00 4.85
2447 4628 0.106708 TCTCGTGACTTTTGCCTGCT 59.893 50.000 0.00 0.00 0.00 4.24
2448 4629 0.236711 CTCGTGACTTTTGCCTGCTG 59.763 55.000 0.00 0.00 0.00 4.41
2449 4630 0.463654 TCGTGACTTTTGCCTGCTGT 60.464 50.000 0.00 0.00 0.00 4.40
2450 4631 0.317269 CGTGACTTTTGCCTGCTGTG 60.317 55.000 0.00 0.00 0.00 3.66
2451 4632 0.031178 GTGACTTTTGCCTGCTGTGG 59.969 55.000 0.00 0.00 0.00 4.17
2463 4644 2.979676 CTGTGGCAGCCTTCGCAA 60.980 61.111 14.15 0.00 37.52 4.85
2464 4645 2.974489 CTGTGGCAGCCTTCGCAAG 61.974 63.158 14.15 0.00 37.52 4.01
2474 4655 2.969443 CCTTCGCAAGGTAGTGTTTG 57.031 50.000 6.74 0.00 43.95 2.93
2475 4656 1.535462 CCTTCGCAAGGTAGTGTTTGG 59.465 52.381 6.74 0.00 43.95 3.28
2476 4657 2.218603 CTTCGCAAGGTAGTGTTTGGT 58.781 47.619 0.00 0.00 38.47 3.67
2477 4658 2.335316 TCGCAAGGTAGTGTTTGGTT 57.665 45.000 0.00 0.00 38.47 3.67
2478 4659 2.215196 TCGCAAGGTAGTGTTTGGTTC 58.785 47.619 0.00 0.00 38.47 3.62
2479 4660 1.944024 CGCAAGGTAGTGTTTGGTTCA 59.056 47.619 0.00 0.00 0.00 3.18
2480 4661 2.552315 CGCAAGGTAGTGTTTGGTTCAT 59.448 45.455 0.00 0.00 0.00 2.57
2481 4662 3.364964 CGCAAGGTAGTGTTTGGTTCATC 60.365 47.826 0.00 0.00 0.00 2.92
2482 4663 3.057526 GCAAGGTAGTGTTTGGTTCATCC 60.058 47.826 0.00 0.00 0.00 3.51
2483 4664 3.434940 AGGTAGTGTTTGGTTCATCCC 57.565 47.619 0.00 0.00 34.77 3.85
2484 4665 2.986728 AGGTAGTGTTTGGTTCATCCCT 59.013 45.455 0.00 0.00 34.77 4.20
2485 4666 3.397955 AGGTAGTGTTTGGTTCATCCCTT 59.602 43.478 0.00 0.00 34.77 3.95
2486 4667 3.506067 GGTAGTGTTTGGTTCATCCCTTG 59.494 47.826 0.00 0.00 34.77 3.61
2487 4668 3.593442 AGTGTTTGGTTCATCCCTTGA 57.407 42.857 0.00 0.00 34.77 3.02
2488 4669 3.490348 AGTGTTTGGTTCATCCCTTGAG 58.510 45.455 0.00 0.00 35.27 3.02
2489 4670 2.029918 GTGTTTGGTTCATCCCTTGAGC 60.030 50.000 0.00 0.00 35.27 4.26
2494 4675 2.035530 GTTCATCCCTTGAGCCTGAG 57.964 55.000 0.00 0.00 35.27 3.35
2495 4676 1.556911 GTTCATCCCTTGAGCCTGAGA 59.443 52.381 0.00 0.00 35.27 3.27
2496 4677 1.956869 TCATCCCTTGAGCCTGAGAA 58.043 50.000 0.00 0.00 0.00 2.87
2497 4678 2.269023 TCATCCCTTGAGCCTGAGAAA 58.731 47.619 0.00 0.00 0.00 2.52
2498 4679 2.848694 TCATCCCTTGAGCCTGAGAAAT 59.151 45.455 0.00 0.00 0.00 2.17
2499 4680 4.040047 TCATCCCTTGAGCCTGAGAAATA 58.960 43.478 0.00 0.00 0.00 1.40
2500 4681 4.474651 TCATCCCTTGAGCCTGAGAAATAA 59.525 41.667 0.00 0.00 0.00 1.40
2501 4682 4.927267 TCCCTTGAGCCTGAGAAATAAA 57.073 40.909 0.00 0.00 0.00 1.40
2502 4683 5.255397 TCCCTTGAGCCTGAGAAATAAAA 57.745 39.130 0.00 0.00 0.00 1.52
2503 4684 5.831103 TCCCTTGAGCCTGAGAAATAAAAT 58.169 37.500 0.00 0.00 0.00 1.82
2504 4685 6.969043 TCCCTTGAGCCTGAGAAATAAAATA 58.031 36.000 0.00 0.00 0.00 1.40
2505 4686 7.410174 TCCCTTGAGCCTGAGAAATAAAATAA 58.590 34.615 0.00 0.00 0.00 1.40
2506 4687 8.061304 TCCCTTGAGCCTGAGAAATAAAATAAT 58.939 33.333 0.00 0.00 0.00 1.28
2507 4688 9.354673 CCCTTGAGCCTGAGAAATAAAATAATA 57.645 33.333 0.00 0.00 0.00 0.98
2525 4706 9.687210 AAAATAATAATATCACACAGCATGCAG 57.313 29.630 21.98 15.38 42.53 4.41
2526 4707 7.991084 ATAATAATATCACACAGCATGCAGT 57.009 32.000 21.98 16.18 42.53 4.40
2527 4708 9.506018 AATAATAATATCACACAGCATGCAGTA 57.494 29.630 21.98 3.27 42.53 2.74
2528 4709 6.791887 ATAATATCACACAGCATGCAGTAC 57.208 37.500 21.98 0.00 42.53 2.73
2529 4710 2.477845 ATCACACAGCATGCAGTACA 57.522 45.000 21.98 5.45 42.53 2.90
2530 4711 1.511850 TCACACAGCATGCAGTACAC 58.488 50.000 21.98 0.00 42.53 2.90
2531 4712 0.164432 CACACAGCATGCAGTACACG 59.836 55.000 21.98 8.57 42.53 4.49
2532 4713 1.133253 CACAGCATGCAGTACACGC 59.867 57.895 21.98 0.00 42.53 5.34
2533 4714 1.301637 ACAGCATGCAGTACACGCA 60.302 52.632 21.98 11.80 40.84 5.24
2538 4719 3.874873 TGCAGTACACGCATGAGC 58.125 55.556 5.93 0.00 33.55 4.26
2548 4729 2.053638 GCATGAGCGCGTTGATCG 60.054 61.111 8.43 0.00 43.12 3.69
2557 4738 2.185350 CGTTGATCGCTCCTGCCT 59.815 61.111 0.00 0.00 35.36 4.75
2558 4739 2.169789 CGTTGATCGCTCCTGCCTG 61.170 63.158 0.00 0.00 35.36 4.85
2559 4740 1.219124 GTTGATCGCTCCTGCCTGA 59.781 57.895 0.00 0.00 35.36 3.86
2560 4741 0.809241 GTTGATCGCTCCTGCCTGAG 60.809 60.000 0.00 0.00 35.36 3.35
2561 4742 1.260538 TTGATCGCTCCTGCCTGAGT 61.261 55.000 2.04 0.00 34.74 3.41
2562 4743 1.067250 GATCGCTCCTGCCTGAGTC 59.933 63.158 2.04 0.00 34.74 3.36
2563 4744 1.670949 GATCGCTCCTGCCTGAGTCA 61.671 60.000 0.00 0.00 34.74 3.41
2564 4745 1.674764 ATCGCTCCTGCCTGAGTCAG 61.675 60.000 13.56 13.56 34.74 3.51
2572 4753 2.363018 CCTGAGTCAGGCCTCCGA 60.363 66.667 26.03 0.00 45.13 4.55
2573 4754 1.760086 CCTGAGTCAGGCCTCCGAT 60.760 63.158 26.03 0.00 45.13 4.18
2574 4755 1.333636 CCTGAGTCAGGCCTCCGATT 61.334 60.000 26.03 0.00 45.13 3.34
2575 4756 0.539051 CTGAGTCAGGCCTCCGATTT 59.461 55.000 12.67 0.00 0.00 2.17
2576 4757 0.984230 TGAGTCAGGCCTCCGATTTT 59.016 50.000 0.00 0.00 0.00 1.82
2577 4758 1.339055 TGAGTCAGGCCTCCGATTTTG 60.339 52.381 0.00 0.00 0.00 2.44
2578 4759 0.035056 AGTCAGGCCTCCGATTTTGG 60.035 55.000 0.00 0.00 0.00 3.28
2579 4760 0.322546 GTCAGGCCTCCGATTTTGGT 60.323 55.000 0.00 0.00 0.00 3.67
2580 4761 0.322456 TCAGGCCTCCGATTTTGGTG 60.322 55.000 0.00 0.00 0.00 4.17
2581 4762 1.000896 AGGCCTCCGATTTTGGTGG 60.001 57.895 0.00 1.18 43.98 4.61
2583 4764 3.603365 CCTCCGATTTTGGTGGCC 58.397 61.111 0.00 0.00 35.99 5.36
2584 4765 1.000896 CCTCCGATTTTGGTGGCCT 60.001 57.895 3.32 0.00 35.99 5.19
2585 4766 1.315257 CCTCCGATTTTGGTGGCCTG 61.315 60.000 3.32 0.00 35.99 4.85
2586 4767 0.322456 CTCCGATTTTGGTGGCCTGA 60.322 55.000 3.32 0.00 0.00 3.86
2587 4768 0.608035 TCCGATTTTGGTGGCCTGAC 60.608 55.000 3.32 0.00 0.00 3.51
2588 4769 0.609131 CCGATTTTGGTGGCCTGACT 60.609 55.000 3.32 0.00 0.00 3.41
2589 4770 0.804989 CGATTTTGGTGGCCTGACTC 59.195 55.000 3.32 0.00 0.00 3.36
2590 4771 1.177401 GATTTTGGTGGCCTGACTCC 58.823 55.000 3.32 0.00 0.00 3.85
2591 4772 0.609131 ATTTTGGTGGCCTGACTCCG 60.609 55.000 3.32 0.00 0.00 4.63
2592 4773 1.701031 TTTTGGTGGCCTGACTCCGA 61.701 55.000 3.32 0.00 0.00 4.55
2593 4774 2.391724 TTTGGTGGCCTGACTCCGAC 62.392 60.000 3.32 0.00 0.00 4.79
2594 4775 2.997897 GGTGGCCTGACTCCGACT 60.998 66.667 3.32 0.00 0.00 4.18
2595 4776 1.681327 GGTGGCCTGACTCCGACTA 60.681 63.158 3.32 0.00 0.00 2.59
2596 4777 1.255667 GGTGGCCTGACTCCGACTAA 61.256 60.000 3.32 0.00 0.00 2.24
2597 4778 0.824759 GTGGCCTGACTCCGACTAAT 59.175 55.000 3.32 0.00 0.00 1.73
2598 4779 1.207329 GTGGCCTGACTCCGACTAATT 59.793 52.381 3.32 0.00 0.00 1.40
2599 4780 2.429610 GTGGCCTGACTCCGACTAATTA 59.570 50.000 3.32 0.00 0.00 1.40
2600 4781 2.693591 TGGCCTGACTCCGACTAATTAG 59.306 50.000 11.05 11.05 0.00 1.73
2601 4782 2.546162 GGCCTGACTCCGACTAATTAGC 60.546 54.545 12.54 4.82 0.00 3.09
2602 4783 2.362717 GCCTGACTCCGACTAATTAGCT 59.637 50.000 12.54 0.00 0.00 3.32
2603 4784 3.797184 GCCTGACTCCGACTAATTAGCTG 60.797 52.174 12.54 5.10 0.00 4.24
2604 4785 3.376540 CTGACTCCGACTAATTAGCTGC 58.623 50.000 12.54 0.00 0.00 5.25
2605 4786 2.100916 TGACTCCGACTAATTAGCTGCC 59.899 50.000 12.54 0.00 0.00 4.85
2606 4787 1.067212 ACTCCGACTAATTAGCTGCCG 59.933 52.381 12.54 10.41 0.00 5.69
2607 4788 0.387929 TCCGACTAATTAGCTGCCGG 59.612 55.000 20.71 20.71 37.08 6.13
2608 4789 0.600255 CCGACTAATTAGCTGCCGGG 60.600 60.000 19.75 8.21 32.64 5.73
2609 4790 0.104304 CGACTAATTAGCTGCCGGGT 59.896 55.000 12.54 0.00 0.00 5.28
2610 4791 1.583054 GACTAATTAGCTGCCGGGTG 58.417 55.000 12.54 0.00 0.00 4.61
2611 4792 1.138266 GACTAATTAGCTGCCGGGTGA 59.862 52.381 12.54 0.00 0.00 4.02
2612 4793 1.139058 ACTAATTAGCTGCCGGGTGAG 59.861 52.381 12.54 0.00 0.00 3.51
2613 4794 0.179056 TAATTAGCTGCCGGGTGAGC 60.179 55.000 2.18 11.07 35.28 4.26
2615 4796 2.317149 ATTAGCTGCCGGGTGAGCTC 62.317 60.000 21.41 6.82 44.55 4.09
2618 4799 4.463879 CTGCCGGGTGAGCTCAGG 62.464 72.222 18.89 16.38 0.00 3.86
2620 4801 4.459089 GCCGGGTGAGCTCAGGTC 62.459 72.222 18.89 9.81 0.00 3.85
2621 4802 2.997315 CCGGGTGAGCTCAGGTCA 60.997 66.667 18.89 1.28 37.74 4.02
2622 4803 2.575993 CGGGTGAGCTCAGGTCAG 59.424 66.667 18.89 7.01 40.79 3.51
2623 4804 2.985456 GGGTGAGCTCAGGTCAGG 59.015 66.667 18.89 0.00 40.79 3.86
2624 4805 2.267324 GGTGAGCTCAGGTCAGGC 59.733 66.667 18.89 2.83 40.79 4.85
2625 4806 2.289532 GGTGAGCTCAGGTCAGGCT 61.290 63.158 18.89 0.00 40.79 4.58
2626 4807 1.079266 GTGAGCTCAGGTCAGGCTG 60.079 63.158 18.89 8.58 40.79 4.85
2627 4808 2.125188 GAGCTCAGGTCAGGCTGC 60.125 66.667 10.34 4.94 36.37 5.25
2628 4809 2.607134 AGCTCAGGTCAGGCTGCT 60.607 61.111 10.34 0.00 34.82 4.24
2629 4810 2.436292 GCTCAGGTCAGGCTGCTG 60.436 66.667 10.34 12.52 0.00 4.41
2630 4811 2.952293 GCTCAGGTCAGGCTGCTGA 61.952 63.158 19.43 19.43 0.00 4.26
2631 4812 1.675801 CTCAGGTCAGGCTGCTGAA 59.324 57.895 20.50 9.05 34.88 3.02
2632 4813 0.035881 CTCAGGTCAGGCTGCTGAAA 59.964 55.000 20.50 5.26 34.88 2.69
2633 4814 0.473755 TCAGGTCAGGCTGCTGAAAA 59.526 50.000 18.66 1.31 34.88 2.29
2634 4815 1.133823 TCAGGTCAGGCTGCTGAAAAA 60.134 47.619 18.66 1.00 34.88 1.94
2635 4816 1.891150 CAGGTCAGGCTGCTGAAAAAT 59.109 47.619 14.71 0.00 34.88 1.82
2636 4817 2.298163 CAGGTCAGGCTGCTGAAAAATT 59.702 45.455 14.71 0.00 34.88 1.82
2637 4818 2.298163 AGGTCAGGCTGCTGAAAAATTG 59.702 45.455 10.34 0.00 34.88 2.32
2638 4819 2.611224 GGTCAGGCTGCTGAAAAATTGG 60.611 50.000 10.34 0.00 34.88 3.16
2639 4820 2.036346 GTCAGGCTGCTGAAAAATTGGT 59.964 45.455 10.34 0.00 34.88 3.67
2640 4821 2.297033 TCAGGCTGCTGAAAAATTGGTC 59.703 45.455 10.34 0.00 0.00 4.02
2641 4822 2.036217 CAGGCTGCTGAAAAATTGGTCA 59.964 45.455 0.00 0.00 0.00 4.02
2642 4823 2.298163 AGGCTGCTGAAAAATTGGTCAG 59.702 45.455 12.31 12.31 43.46 3.51
2643 4824 2.611224 GGCTGCTGAAAAATTGGTCAGG 60.611 50.000 16.45 5.94 41.36 3.86
2644 4825 2.680577 CTGCTGAAAAATTGGTCAGGC 58.319 47.619 16.45 11.01 41.36 4.85
2645 4826 2.036217 CTGCTGAAAAATTGGTCAGGCA 59.964 45.455 16.45 13.76 41.36 4.75
2646 4827 2.224018 TGCTGAAAAATTGGTCAGGCAC 60.224 45.455 16.45 4.99 41.36 5.01
2654 4835 4.268720 GGTCAGGCACCAACCAAA 57.731 55.556 6.43 0.00 45.98 3.28
2655 4836 1.739667 GGTCAGGCACCAACCAAAC 59.260 57.895 6.43 0.00 45.98 2.93
2656 4837 1.040339 GGTCAGGCACCAACCAAACA 61.040 55.000 6.43 0.00 45.98 2.83
2657 4838 0.820871 GTCAGGCACCAACCAAACAA 59.179 50.000 0.00 0.00 0.00 2.83
2658 4839 1.110442 TCAGGCACCAACCAAACAAG 58.890 50.000 0.00 0.00 0.00 3.16
2659 4840 1.110442 CAGGCACCAACCAAACAAGA 58.890 50.000 0.00 0.00 0.00 3.02
2660 4841 1.111277 AGGCACCAACCAAACAAGAC 58.889 50.000 0.00 0.00 0.00 3.01
2661 4842 0.248866 GGCACCAACCAAACAAGACG 60.249 55.000 0.00 0.00 0.00 4.18
2662 4843 0.454196 GCACCAACCAAACAAGACGT 59.546 50.000 0.00 0.00 0.00 4.34
2663 4844 1.671845 GCACCAACCAAACAAGACGTA 59.328 47.619 0.00 0.00 0.00 3.57
2664 4845 2.286772 GCACCAACCAAACAAGACGTAG 60.287 50.000 0.00 0.00 0.00 3.51
2665 4846 2.289547 CACCAACCAAACAAGACGTAGG 59.710 50.000 0.00 0.00 0.00 3.18
2666 4847 1.265905 CCAACCAAACAAGACGTAGGC 59.734 52.381 0.00 0.00 0.00 3.93
2667 4848 1.265905 CAACCAAACAAGACGTAGGCC 59.734 52.381 0.00 0.00 0.00 5.19
2668 4849 0.470766 ACCAAACAAGACGTAGGCCA 59.529 50.000 5.01 0.00 0.00 5.36
2669 4850 1.156736 CCAAACAAGACGTAGGCCAG 58.843 55.000 5.01 0.00 0.00 4.85
2670 4851 1.542547 CCAAACAAGACGTAGGCCAGT 60.543 52.381 5.01 0.82 0.00 4.00
2671 4852 1.531149 CAAACAAGACGTAGGCCAGTG 59.469 52.381 5.01 0.00 0.00 3.66
2672 4853 0.756903 AACAAGACGTAGGCCAGTGT 59.243 50.000 5.01 0.00 0.00 3.55
2673 4854 0.317479 ACAAGACGTAGGCCAGTGTC 59.683 55.000 5.01 9.47 0.00 3.67
2674 4855 0.389948 CAAGACGTAGGCCAGTGTCC 60.390 60.000 5.01 0.00 31.75 4.02
2675 4856 1.874345 AAGACGTAGGCCAGTGTCCG 61.874 60.000 5.01 0.00 31.75 4.79
2676 4857 3.352338 GACGTAGGCCAGTGTCCGG 62.352 68.421 5.01 0.00 0.00 5.14
2683 4864 2.743928 CCAGTGTCCGGCTTGCTC 60.744 66.667 0.00 0.00 0.00 4.26
2684 4865 2.743928 CAGTGTCCGGCTTGCTCC 60.744 66.667 0.00 0.00 0.00 4.70
2685 4866 4.021925 AGTGTCCGGCTTGCTCCC 62.022 66.667 0.00 0.00 0.00 4.30
2691 4872 4.899239 CGGCTTGCTCCCGGCTAG 62.899 72.222 0.00 0.00 44.44 3.42
2692 4873 4.554036 GGCTTGCTCCCGGCTAGG 62.554 72.222 0.00 0.00 42.48 3.02
2694 4875 3.785859 CTTGCTCCCGGCTAGGCA 61.786 66.667 17.45 0.68 39.48 4.75
2695 4876 3.746949 CTTGCTCCCGGCTAGGCAG 62.747 68.421 17.45 4.61 39.48 4.85
2696 4877 4.777854 TGCTCCCGGCTAGGCAGA 62.778 66.667 17.45 11.15 42.39 4.26
2697 4878 3.237741 GCTCCCGGCTAGGCAGAT 61.238 66.667 17.45 0.00 39.21 2.90
2698 4879 2.812619 GCTCCCGGCTAGGCAGATT 61.813 63.158 17.45 0.00 39.21 2.40
2699 4880 1.832912 CTCCCGGCTAGGCAGATTT 59.167 57.895 17.45 0.00 39.21 2.17
2700 4881 0.250081 CTCCCGGCTAGGCAGATTTC 60.250 60.000 17.45 0.00 39.21 2.17
2701 4882 0.691078 TCCCGGCTAGGCAGATTTCT 60.691 55.000 17.45 0.00 39.21 2.52
2702 4883 0.250081 CCCGGCTAGGCAGATTTCTC 60.250 60.000 17.45 0.00 39.21 2.87
2703 4884 0.755686 CCGGCTAGGCAGATTTCTCT 59.244 55.000 17.45 0.00 0.00 3.10
2704 4885 1.139853 CCGGCTAGGCAGATTTCTCTT 59.860 52.381 17.45 0.00 0.00 2.85
2705 4886 2.365617 CCGGCTAGGCAGATTTCTCTTA 59.634 50.000 17.45 0.00 0.00 2.10
2706 4887 3.553922 CCGGCTAGGCAGATTTCTCTTAG 60.554 52.174 17.45 0.00 0.00 2.18
2707 4888 3.553922 CGGCTAGGCAGATTTCTCTTAGG 60.554 52.174 17.45 0.00 0.00 2.69
2708 4889 3.244387 GGCTAGGCAGATTTCTCTTAGGG 60.244 52.174 12.16 0.00 0.00 3.53
2709 4890 3.389656 GCTAGGCAGATTTCTCTTAGGGT 59.610 47.826 0.00 0.00 0.00 4.34
2710 4891 4.589374 GCTAGGCAGATTTCTCTTAGGGTA 59.411 45.833 0.00 0.00 0.00 3.69
2711 4892 5.279256 GCTAGGCAGATTTCTCTTAGGGTAG 60.279 48.000 0.00 0.00 0.00 3.18
2712 4893 3.389656 AGGCAGATTTCTCTTAGGGTAGC 59.610 47.826 0.00 0.00 0.00 3.58
2713 4894 3.134804 GGCAGATTTCTCTTAGGGTAGCA 59.865 47.826 0.00 0.00 0.00 3.49
2714 4895 4.384208 GGCAGATTTCTCTTAGGGTAGCAA 60.384 45.833 0.00 0.00 0.00 3.91
2715 4896 4.572795 GCAGATTTCTCTTAGGGTAGCAAC 59.427 45.833 0.00 0.00 0.00 4.17
2716 4897 5.119694 CAGATTTCTCTTAGGGTAGCAACC 58.880 45.833 0.00 0.00 45.97 3.77
2725 4906 1.964448 GGTAGCAACCAAACAGCCC 59.036 57.895 0.00 0.00 45.98 5.19
2726 4907 0.539669 GGTAGCAACCAAACAGCCCT 60.540 55.000 0.00 0.00 45.98 5.19
2727 4908 1.328279 GTAGCAACCAAACAGCCCTT 58.672 50.000 0.00 0.00 0.00 3.95
2728 4909 1.686587 GTAGCAACCAAACAGCCCTTT 59.313 47.619 0.00 0.00 0.00 3.11
2729 4910 2.080654 AGCAACCAAACAGCCCTTTA 57.919 45.000 0.00 0.00 0.00 1.85
2735 4916 3.571590 ACCAAACAGCCCTTTATCAACA 58.428 40.909 0.00 0.00 0.00 3.33
2745 4926 7.781693 ACAGCCCTTTATCAACAATGATCTATT 59.218 33.333 0.00 0.00 42.75 1.73
2792 4973 4.335315 TGAGTTTGTGAGATTGTGTGGTTC 59.665 41.667 0.00 0.00 0.00 3.62
2793 4974 4.269183 AGTTTGTGAGATTGTGTGGTTCA 58.731 39.130 0.00 0.00 0.00 3.18
2794 4975 4.889409 AGTTTGTGAGATTGTGTGGTTCAT 59.111 37.500 0.00 0.00 0.00 2.57
2795 4976 4.834357 TTGTGAGATTGTGTGGTTCATG 57.166 40.909 0.00 0.00 0.00 3.07
2796 4977 3.148412 TGTGAGATTGTGTGGTTCATGG 58.852 45.455 0.00 0.00 0.00 3.66
2797 4978 3.149196 GTGAGATTGTGTGGTTCATGGT 58.851 45.455 0.00 0.00 0.00 3.55
2798 4979 3.569701 GTGAGATTGTGTGGTTCATGGTT 59.430 43.478 0.00 0.00 0.00 3.67
2799 4980 4.037923 GTGAGATTGTGTGGTTCATGGTTT 59.962 41.667 0.00 0.00 0.00 3.27
2800 4981 4.648762 TGAGATTGTGTGGTTCATGGTTTT 59.351 37.500 0.00 0.00 0.00 2.43
2801 4982 5.200368 AGATTGTGTGGTTCATGGTTTTC 57.800 39.130 0.00 0.00 0.00 2.29
2802 4983 4.648762 AGATTGTGTGGTTCATGGTTTTCA 59.351 37.500 0.00 0.00 0.00 2.69
2803 4984 4.808414 TTGTGTGGTTCATGGTTTTCAA 57.192 36.364 0.00 0.00 0.00 2.69
2804 4985 5.350504 TTGTGTGGTTCATGGTTTTCAAT 57.649 34.783 0.00 0.00 0.00 2.57
2805 4986 5.350504 TGTGTGGTTCATGGTTTTCAATT 57.649 34.783 0.00 0.00 0.00 2.32
2806 4987 5.738909 TGTGTGGTTCATGGTTTTCAATTT 58.261 33.333 0.00 0.00 0.00 1.82
2807 4988 5.814705 TGTGTGGTTCATGGTTTTCAATTTC 59.185 36.000 0.00 0.00 0.00 2.17
2808 4989 5.814705 GTGTGGTTCATGGTTTTCAATTTCA 59.185 36.000 0.00 0.00 0.00 2.69
2809 4990 6.018832 GTGTGGTTCATGGTTTTCAATTTCAG 60.019 38.462 0.00 0.00 0.00 3.02
2810 4991 6.048509 GTGGTTCATGGTTTTCAATTTCAGT 58.951 36.000 0.00 0.00 0.00 3.41
2811 4992 6.538381 GTGGTTCATGGTTTTCAATTTCAGTT 59.462 34.615 0.00 0.00 0.00 3.16
2812 4993 7.065683 GTGGTTCATGGTTTTCAATTTCAGTTT 59.934 33.333 0.00 0.00 0.00 2.66
2813 4994 8.260818 TGGTTCATGGTTTTCAATTTCAGTTTA 58.739 29.630 0.00 0.00 0.00 2.01
2814 4995 8.764287 GGTTCATGGTTTTCAATTTCAGTTTAG 58.236 33.333 0.00 0.00 0.00 1.85
2815 4996 9.528018 GTTCATGGTTTTCAATTTCAGTTTAGA 57.472 29.630 0.00 0.00 0.00 2.10
2835 5016 3.892200 AAAAATTCAGCACCAGCCG 57.108 47.368 0.00 0.00 43.56 5.52
2836 5017 1.327303 AAAAATTCAGCACCAGCCGA 58.673 45.000 0.00 0.00 43.56 5.54
2837 5018 1.327303 AAAATTCAGCACCAGCCGAA 58.673 45.000 0.00 0.00 41.09 4.30
2838 5019 1.327303 AAATTCAGCACCAGCCGAAA 58.673 45.000 0.00 0.00 40.30 3.46
2839 5020 1.549203 AATTCAGCACCAGCCGAAAT 58.451 45.000 0.00 0.00 40.30 2.17
2840 5021 1.098050 ATTCAGCACCAGCCGAAATC 58.902 50.000 0.00 0.00 40.30 2.17
2841 5022 0.250684 TTCAGCACCAGCCGAAATCA 60.251 50.000 0.00 0.00 43.56 2.57
2842 5023 0.955428 TCAGCACCAGCCGAAATCAC 60.955 55.000 0.00 0.00 43.56 3.06
2843 5024 0.957395 CAGCACCAGCCGAAATCACT 60.957 55.000 0.00 0.00 43.56 3.41
2844 5025 0.957395 AGCACCAGCCGAAATCACTG 60.957 55.000 0.00 0.00 43.56 3.66
2845 5026 0.955428 GCACCAGCCGAAATCACTGA 60.955 55.000 0.00 0.00 33.10 3.41
2846 5027 1.522668 CACCAGCCGAAATCACTGAA 58.477 50.000 0.00 0.00 33.10 3.02
2847 5028 1.879380 CACCAGCCGAAATCACTGAAA 59.121 47.619 0.00 0.00 33.10 2.69
2848 5029 2.489329 CACCAGCCGAAATCACTGAAAT 59.511 45.455 0.00 0.00 33.10 2.17
2849 5030 3.057315 CACCAGCCGAAATCACTGAAATT 60.057 43.478 0.00 0.00 33.10 1.82
2850 5031 3.191371 ACCAGCCGAAATCACTGAAATTC 59.809 43.478 0.00 0.00 33.10 2.17
2851 5032 3.191162 CCAGCCGAAATCACTGAAATTCA 59.809 43.478 0.00 0.00 33.10 2.57
2876 5057 8.579682 AGTGAAATTCAGTGATTTTAGTTTGC 57.420 30.769 11.88 1.77 29.75 3.68
2877 5058 8.196771 AGTGAAATTCAGTGATTTTAGTTTGCA 58.803 29.630 11.88 3.93 29.75 4.08
2878 5059 8.981647 GTGAAATTCAGTGATTTTAGTTTGCAT 58.018 29.630 11.88 0.00 29.75 3.96
2879 5060 9.545105 TGAAATTCAGTGATTTTAGTTTGCATT 57.455 25.926 11.88 0.00 29.75 3.56
2882 5063 7.621832 TTCAGTGATTTTAGTTTGCATTTCG 57.378 32.000 0.00 0.00 0.00 3.46
2883 5064 6.148948 TCAGTGATTTTAGTTTGCATTTCGG 58.851 36.000 0.00 0.00 0.00 4.30
2884 5065 4.923281 AGTGATTTTAGTTTGCATTTCGGC 59.077 37.500 0.00 0.00 0.00 5.54
2885 5066 4.091365 GTGATTTTAGTTTGCATTTCGGCC 59.909 41.667 0.00 0.00 0.00 6.13
2886 5067 3.735237 TTTTAGTTTGCATTTCGGCCA 57.265 38.095 2.24 0.00 0.00 5.36
2887 5068 3.735237 TTTAGTTTGCATTTCGGCCAA 57.265 38.095 2.24 0.00 0.00 4.52
2888 5069 3.735237 TTAGTTTGCATTTCGGCCAAA 57.265 38.095 2.24 2.92 0.00 3.28
2889 5070 2.153366 AGTTTGCATTTCGGCCAAAG 57.847 45.000 2.24 0.00 0.00 2.77
2890 5071 1.147473 GTTTGCATTTCGGCCAAAGG 58.853 50.000 2.24 5.76 0.00 3.11
2903 5084 2.809446 GCCAAAGGCCGAAATATTCAC 58.191 47.619 0.00 0.00 44.06 3.18
2904 5085 2.427095 GCCAAAGGCCGAAATATTCACT 59.573 45.455 0.00 0.00 44.06 3.41
2905 5086 3.119137 GCCAAAGGCCGAAATATTCACTT 60.119 43.478 0.00 0.00 44.06 3.16
2906 5087 4.423732 CCAAAGGCCGAAATATTCACTTG 58.576 43.478 0.00 0.00 0.00 3.16
2907 5088 4.157656 CCAAAGGCCGAAATATTCACTTGA 59.842 41.667 0.00 0.00 0.00 3.02
2908 5089 5.336372 CCAAAGGCCGAAATATTCACTTGAA 60.336 40.000 0.00 0.00 38.56 2.69
2909 5090 6.332630 CAAAGGCCGAAATATTCACTTGAAT 58.667 36.000 9.37 9.37 45.77 2.57
2910 5091 6.530019 AAGGCCGAAATATTCACTTGAATT 57.470 33.333 9.68 0.00 41.64 2.17
2911 5092 6.530019 AGGCCGAAATATTCACTTGAATTT 57.470 33.333 9.68 0.53 41.64 1.82
2912 5093 7.639113 AGGCCGAAATATTCACTTGAATTTA 57.361 32.000 9.68 0.00 41.64 1.40
2913 5094 8.062065 AGGCCGAAATATTCACTTGAATTTAA 57.938 30.769 9.68 0.00 41.64 1.52
2914 5095 8.695456 AGGCCGAAATATTCACTTGAATTTAAT 58.305 29.630 9.68 0.00 41.64 1.40
2915 5096 9.313118 GGCCGAAATATTCACTTGAATTTAATT 57.687 29.630 9.68 1.96 41.64 1.40
2981 5162 8.243426 TGATTTCCTGTGTACTATTGAAATTGC 58.757 33.333 12.14 5.24 33.81 3.56
2982 5163 7.759489 TTTCCTGTGTACTATTGAAATTGCT 57.241 32.000 0.00 0.00 0.00 3.91
2983 5164 6.741992 TCCTGTGTACTATTGAAATTGCTG 57.258 37.500 0.00 0.00 0.00 4.41
2984 5165 6.472016 TCCTGTGTACTATTGAAATTGCTGA 58.528 36.000 0.00 0.00 0.00 4.26
2985 5166 6.939730 TCCTGTGTACTATTGAAATTGCTGAA 59.060 34.615 0.00 0.00 0.00 3.02
2986 5167 7.446931 TCCTGTGTACTATTGAAATTGCTGAAA 59.553 33.333 0.00 0.00 0.00 2.69
2987 5168 8.246180 CCTGTGTACTATTGAAATTGCTGAAAT 58.754 33.333 0.00 0.00 0.00 2.17
2995 5176 9.925268 CTATTGAAATTGCTGAAATATTTTGGC 57.075 29.630 15.06 15.06 0.00 4.52
2996 5177 6.740411 TGAAATTGCTGAAATATTTTGGCC 57.260 33.333 17.58 0.00 0.00 5.36
2997 5178 5.350914 TGAAATTGCTGAAATATTTTGGCCG 59.649 36.000 17.58 0.24 0.00 6.13
2998 5179 4.734398 ATTGCTGAAATATTTTGGCCGA 57.266 36.364 17.58 0.00 0.00 5.54
2999 5180 4.527509 TTGCTGAAATATTTTGGCCGAA 57.472 36.364 17.58 0.00 0.00 4.30
3000 5181 4.527509 TGCTGAAATATTTTGGCCGAAA 57.472 36.364 20.60 20.60 0.00 3.46
3001 5182 4.241681 TGCTGAAATATTTTGGCCGAAAC 58.758 39.130 20.75 8.10 0.00 2.78
3002 5183 3.303229 GCTGAAATATTTTGGCCGAAACG 59.697 43.478 20.75 5.63 0.00 3.60
3003 5184 4.481463 CTGAAATATTTTGGCCGAAACGT 58.519 39.130 20.75 8.51 0.00 3.99
3004 5185 5.624344 TGAAATATTTTGGCCGAAACGTA 57.376 34.783 20.75 10.53 0.00 3.57
3005 5186 6.010294 TGAAATATTTTGGCCGAAACGTAA 57.990 33.333 20.75 7.15 0.00 3.18
3006 5187 6.622549 TGAAATATTTTGGCCGAAACGTAAT 58.377 32.000 20.75 7.01 0.00 1.89
3007 5188 7.759465 TGAAATATTTTGGCCGAAACGTAATA 58.241 30.769 20.75 9.08 0.00 0.98
3008 5189 8.407064 TGAAATATTTTGGCCGAAACGTAATAT 58.593 29.630 20.75 10.96 0.00 1.28
3009 5190 9.240159 GAAATATTTTGGCCGAAACGTAATATT 57.760 29.630 20.75 15.83 31.57 1.28
3010 5191 9.589111 AAATATTTTGGCCGAAACGTAATATTT 57.411 25.926 20.75 19.98 34.43 1.40
3011 5192 8.791355 ATATTTTGGCCGAAACGTAATATTTC 57.209 30.769 20.75 0.00 33.52 2.17
3012 5193 5.624344 TTTGGCCGAAACGTAATATTTCA 57.376 34.783 1.75 0.00 36.09 2.69
3013 5194 4.868450 TGGCCGAAACGTAATATTTCAG 57.132 40.909 0.00 0.00 36.09 3.02
3014 5195 4.255301 TGGCCGAAACGTAATATTTCAGT 58.745 39.130 0.00 0.00 36.09 3.41
3015 5196 4.093703 TGGCCGAAACGTAATATTTCAGTG 59.906 41.667 0.00 0.00 36.09 3.66
3016 5197 4.093850 GGCCGAAACGTAATATTTCAGTGT 59.906 41.667 0.00 0.00 36.09 3.55
3017 5198 5.253335 GCCGAAACGTAATATTTCAGTGTC 58.747 41.667 0.00 0.00 36.09 3.67
3018 5199 5.063060 GCCGAAACGTAATATTTCAGTGTCT 59.937 40.000 0.00 0.00 36.09 3.41
3019 5200 6.254157 GCCGAAACGTAATATTTCAGTGTCTA 59.746 38.462 0.00 0.00 36.09 2.59
3020 5201 7.607005 CCGAAACGTAATATTTCAGTGTCTAC 58.393 38.462 0.00 0.00 36.09 2.59
3021 5202 7.487189 CCGAAACGTAATATTTCAGTGTCTACT 59.513 37.037 0.00 0.00 36.09 2.57
3061 5242 8.400184 TCAGTGAATTTCATTGAAATCTCACT 57.600 30.769 32.24 32.24 46.05 3.41
3063 5244 8.400184 AGTGAATTTCATTGAAATCTCACTGA 57.600 30.769 34.10 16.03 45.09 3.41
3064 5245 8.853126 AGTGAATTTCATTGAAATCTCACTGAA 58.147 29.630 34.10 17.44 45.09 3.02
3081 5262 4.654091 CTGAAAGTGAAAACCATGGTGT 57.346 40.909 20.60 10.88 0.00 4.16
3082 5263 4.362279 CTGAAAGTGAAAACCATGGTGTG 58.638 43.478 20.60 0.00 0.00 3.82
3167 5348 3.953612 TGCACTGGACTTGTCTTGATTTT 59.046 39.130 0.61 0.00 0.00 1.82
3230 5411 9.662947 AATTTCTATTTACCTAGTTGTAGCGTT 57.337 29.630 0.00 0.00 0.00 4.84
3244 5425 5.155278 TGTAGCGTTGGAAGAAAATAGGA 57.845 39.130 0.00 0.00 0.00 2.94
3278 5459 6.997239 ACGTGATGATAGTAGTAGTGTTGA 57.003 37.500 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
72 73 8.616076 TCTCTCTGTGTTTCTTTTTCTGAAATC 58.384 33.333 3.31 0.00 36.10 2.17
126 141 7.663827 ACTAAAACTATAAAAGGCAAACACCC 58.336 34.615 0.00 0.00 0.00 4.61
240 256 3.324556 CCCACATCCAAAAGTTGAACCAT 59.675 43.478 0.00 0.00 0.00 3.55
363 503 6.556495 AGAGCAATAACTCTTCCATCCTCATA 59.444 38.462 0.00 0.00 44.76 2.15
471 620 5.012148 ACATTAATCGAGGCAGCTATAAGGT 59.988 40.000 0.00 0.00 0.00 3.50
1085 1371 2.502295 CCAGCTTGAGTCTTTCTGCTT 58.498 47.619 0.00 0.00 35.33 3.91
1097 1383 2.016318 CATAAATGACGGCCAGCTTGA 58.984 47.619 2.24 0.00 0.00 3.02
1123 2997 6.706716 TCATCATCTTCATCATCTTCTGCTTC 59.293 38.462 0.00 0.00 0.00 3.86
1162 3045 4.119862 GCTACGATGGCTTCATCAAGTAA 58.880 43.478 7.09 0.00 45.65 2.24
1163 3046 3.384789 AGCTACGATGGCTTCATCAAGTA 59.615 43.478 7.09 2.06 45.65 2.24
1221 3104 1.625818 GGCGGAATGATCTCCCATAGT 59.374 52.381 0.00 0.00 31.03 2.12
1230 3113 2.709475 GCACGTGGCGGAATGATC 59.291 61.111 18.88 0.00 0.00 2.92
1980 4159 5.683876 AGCCTCACACATTCTACACTATT 57.316 39.130 0.00 0.00 0.00 1.73
2073 4253 2.093606 CAGCAGAGCCTTCTTCATCAGA 60.094 50.000 0.00 0.00 0.00 3.27
2111 4291 4.394712 GTGGTGACGGAGCCCCTG 62.395 72.222 0.00 0.00 0.00 4.45
2196 4376 3.379372 CCAACATGAAGATTCTTGCCGAT 59.621 43.478 3.03 0.00 36.22 4.18
2301 4481 1.801983 CAGCCACACGCATGCATAA 59.198 52.632 19.57 0.00 41.38 1.90
2354 4535 2.316108 CAACCAAACAGCCCCTAAGTT 58.684 47.619 0.00 0.00 0.00 2.66
2360 4541 1.456705 TCACCAACCAAACAGCCCC 60.457 57.895 0.00 0.00 0.00 5.80
2361 4542 1.739667 GTCACCAACCAAACAGCCC 59.260 57.895 0.00 0.00 0.00 5.19
2375 4556 2.359230 GCAGGGTGCTCAGGTCAC 60.359 66.667 0.00 0.00 40.96 3.67
2376 4557 3.640407 GGCAGGGTGCTCAGGTCA 61.640 66.667 0.00 0.00 44.28 4.02
2377 4558 3.325753 AGGCAGGGTGCTCAGGTC 61.326 66.667 0.00 0.00 44.28 3.85
2378 4559 3.644606 CAGGCAGGGTGCTCAGGT 61.645 66.667 0.00 0.00 44.28 4.00
2379 4560 3.324930 TCAGGCAGGGTGCTCAGG 61.325 66.667 0.00 0.00 44.28 3.86
2380 4561 1.834856 TTCTCAGGCAGGGTGCTCAG 61.835 60.000 0.00 0.00 44.28 3.35
2381 4562 1.418097 TTTCTCAGGCAGGGTGCTCA 61.418 55.000 0.00 0.00 44.28 4.26
2382 4563 0.250901 TTTTCTCAGGCAGGGTGCTC 60.251 55.000 0.00 0.00 44.28 4.26
2383 4564 0.185901 TTTTTCTCAGGCAGGGTGCT 59.814 50.000 0.00 0.00 44.28 4.40
2384 4565 1.067354 CATTTTTCTCAGGCAGGGTGC 60.067 52.381 0.00 0.00 44.08 5.01
2385 4566 1.547372 CCATTTTTCTCAGGCAGGGTG 59.453 52.381 0.00 0.00 0.00 4.61
2386 4567 1.428912 TCCATTTTTCTCAGGCAGGGT 59.571 47.619 0.00 0.00 0.00 4.34
2387 4568 1.821136 GTCCATTTTTCTCAGGCAGGG 59.179 52.381 0.00 0.00 0.00 4.45
2388 4569 1.470098 CGTCCATTTTTCTCAGGCAGG 59.530 52.381 0.00 0.00 0.00 4.85
2389 4570 1.135575 GCGTCCATTTTTCTCAGGCAG 60.136 52.381 0.00 0.00 0.00 4.85
2390 4571 0.881118 GCGTCCATTTTTCTCAGGCA 59.119 50.000 0.00 0.00 0.00 4.75
2391 4572 0.171231 GGCGTCCATTTTTCTCAGGC 59.829 55.000 0.00 0.00 0.00 4.85
2392 4573 1.470098 CAGGCGTCCATTTTTCTCAGG 59.530 52.381 0.00 0.00 0.00 3.86
2393 4574 2.426522 TCAGGCGTCCATTTTTCTCAG 58.573 47.619 0.00 0.00 0.00 3.35
2394 4575 2.559698 TCAGGCGTCCATTTTTCTCA 57.440 45.000 0.00 0.00 0.00 3.27
2395 4576 4.192317 ACTATCAGGCGTCCATTTTTCTC 58.808 43.478 0.00 0.00 0.00 2.87
2396 4577 4.222124 ACTATCAGGCGTCCATTTTTCT 57.778 40.909 0.00 0.00 0.00 2.52
2397 4578 4.662145 CAACTATCAGGCGTCCATTTTTC 58.338 43.478 0.00 0.00 0.00 2.29
2398 4579 3.119495 GCAACTATCAGGCGTCCATTTTT 60.119 43.478 0.00 0.00 0.00 1.94
2399 4580 2.423538 GCAACTATCAGGCGTCCATTTT 59.576 45.455 0.00 0.00 0.00 1.82
2400 4581 2.017049 GCAACTATCAGGCGTCCATTT 58.983 47.619 0.00 0.00 0.00 2.32
2401 4582 1.668419 GCAACTATCAGGCGTCCATT 58.332 50.000 0.00 0.00 0.00 3.16
2402 4583 0.179045 GGCAACTATCAGGCGTCCAT 60.179 55.000 0.00 0.00 0.00 3.41
2403 4584 1.220749 GGCAACTATCAGGCGTCCA 59.779 57.895 0.00 0.00 0.00 4.02
2404 4585 1.883084 CGGCAACTATCAGGCGTCC 60.883 63.158 0.00 0.00 46.92 4.79
2405 4586 3.706140 CGGCAACTATCAGGCGTC 58.294 61.111 0.00 0.00 46.92 5.19
2408 4589 1.227674 CCTCCGGCAACTATCAGGC 60.228 63.158 0.00 0.00 0.00 4.85
2409 4590 0.541863 AACCTCCGGCAACTATCAGG 59.458 55.000 0.00 0.00 0.00 3.86
2410 4591 1.482593 AGAACCTCCGGCAACTATCAG 59.517 52.381 0.00 0.00 0.00 2.90
2411 4592 1.480954 GAGAACCTCCGGCAACTATCA 59.519 52.381 0.00 0.00 0.00 2.15
2412 4593 1.536284 CGAGAACCTCCGGCAACTATC 60.536 57.143 0.00 0.00 0.00 2.08
2413 4594 0.460311 CGAGAACCTCCGGCAACTAT 59.540 55.000 0.00 0.00 0.00 2.12
2414 4595 0.896940 ACGAGAACCTCCGGCAACTA 60.897 55.000 0.00 0.00 0.00 2.24
2415 4596 2.207924 ACGAGAACCTCCGGCAACT 61.208 57.895 0.00 0.00 0.00 3.16
2416 4597 2.027625 CACGAGAACCTCCGGCAAC 61.028 63.158 0.00 0.00 0.00 4.17
2417 4598 2.204461 TCACGAGAACCTCCGGCAA 61.204 57.895 0.00 0.00 0.00 4.52
2418 4599 2.599281 TCACGAGAACCTCCGGCA 60.599 61.111 0.00 0.00 0.00 5.69
2419 4600 2.126031 GTCACGAGAACCTCCGGC 60.126 66.667 0.00 0.00 0.00 6.13
2420 4601 0.317479 AAAGTCACGAGAACCTCCGG 59.683 55.000 0.00 0.00 0.00 5.14
2421 4602 1.792949 CAAAAGTCACGAGAACCTCCG 59.207 52.381 0.00 0.00 0.00 4.63
2422 4603 1.531578 GCAAAAGTCACGAGAACCTCC 59.468 52.381 0.00 0.00 0.00 4.30
2423 4604 1.531578 GGCAAAAGTCACGAGAACCTC 59.468 52.381 0.00 0.00 0.00 3.85
2424 4605 1.141053 AGGCAAAAGTCACGAGAACCT 59.859 47.619 0.00 0.00 0.00 3.50
2425 4606 1.264288 CAGGCAAAAGTCACGAGAACC 59.736 52.381 0.00 0.00 0.00 3.62
2426 4607 1.334149 GCAGGCAAAAGTCACGAGAAC 60.334 52.381 0.00 0.00 0.00 3.01
2427 4608 0.944386 GCAGGCAAAAGTCACGAGAA 59.056 50.000 0.00 0.00 0.00 2.87
2428 4609 0.106708 AGCAGGCAAAAGTCACGAGA 59.893 50.000 0.00 0.00 0.00 4.04
2429 4610 0.236711 CAGCAGGCAAAAGTCACGAG 59.763 55.000 0.00 0.00 0.00 4.18
2430 4611 0.463654 ACAGCAGGCAAAAGTCACGA 60.464 50.000 0.00 0.00 0.00 4.35
2431 4612 0.317269 CACAGCAGGCAAAAGTCACG 60.317 55.000 0.00 0.00 0.00 4.35
2432 4613 0.031178 CCACAGCAGGCAAAAGTCAC 59.969 55.000 0.00 0.00 0.00 3.67
2433 4614 2.417978 CCACAGCAGGCAAAAGTCA 58.582 52.632 0.00 0.00 0.00 3.41
2446 4627 2.974489 CTTGCGAAGGCTGCCACAG 61.974 63.158 22.65 11.94 40.82 3.66
2447 4628 2.979676 CTTGCGAAGGCTGCCACA 60.980 61.111 22.65 10.43 40.82 4.17
2448 4629 3.741476 CCTTGCGAAGGCTGCCAC 61.741 66.667 22.65 13.27 42.78 5.01
2456 4637 2.218603 ACCAAACACTACCTTGCGAAG 58.781 47.619 0.00 0.00 0.00 3.79
2457 4638 2.335316 ACCAAACACTACCTTGCGAA 57.665 45.000 0.00 0.00 0.00 4.70
2458 4639 2.215196 GAACCAAACACTACCTTGCGA 58.785 47.619 0.00 0.00 0.00 5.10
2459 4640 1.944024 TGAACCAAACACTACCTTGCG 59.056 47.619 0.00 0.00 0.00 4.85
2460 4641 3.057526 GGATGAACCAAACACTACCTTGC 60.058 47.826 0.00 0.00 38.79 4.01
2461 4642 3.506067 GGGATGAACCAAACACTACCTTG 59.494 47.826 0.00 0.00 41.20 3.61
2462 4643 3.397955 AGGGATGAACCAAACACTACCTT 59.602 43.478 0.00 0.00 41.20 3.50
2463 4644 2.986728 AGGGATGAACCAAACACTACCT 59.013 45.455 0.00 0.00 41.20 3.08
2464 4645 3.434940 AGGGATGAACCAAACACTACC 57.565 47.619 0.00 0.00 41.20 3.18
2465 4646 4.394729 TCAAGGGATGAACCAAACACTAC 58.605 43.478 0.00 0.00 41.20 2.73
2466 4647 4.651778 CTCAAGGGATGAACCAAACACTA 58.348 43.478 0.00 0.00 41.20 2.74
2467 4648 3.490348 CTCAAGGGATGAACCAAACACT 58.510 45.455 0.00 0.00 41.20 3.55
2468 4649 2.029918 GCTCAAGGGATGAACCAAACAC 60.030 50.000 0.00 0.00 41.20 3.32
2469 4650 2.238521 GCTCAAGGGATGAACCAAACA 58.761 47.619 0.00 0.00 41.20 2.83
2470 4651 1.546029 GGCTCAAGGGATGAACCAAAC 59.454 52.381 0.00 0.00 42.79 2.93
2471 4652 1.428912 AGGCTCAAGGGATGAACCAAA 59.571 47.619 1.21 0.00 45.21 3.28
2472 4653 1.075601 AGGCTCAAGGGATGAACCAA 58.924 50.000 1.21 0.00 45.21 3.67
2473 4654 0.329261 CAGGCTCAAGGGATGAACCA 59.671 55.000 1.21 0.00 45.21 3.67
2474 4655 0.620556 TCAGGCTCAAGGGATGAACC 59.379 55.000 0.00 0.00 43.46 3.62
2475 4656 1.556911 TCTCAGGCTCAAGGGATGAAC 59.443 52.381 0.00 0.00 37.67 3.18
2476 4657 1.956869 TCTCAGGCTCAAGGGATGAA 58.043 50.000 0.00 0.00 37.67 2.57
2477 4658 1.956869 TTCTCAGGCTCAAGGGATGA 58.043 50.000 0.00 0.00 36.38 2.92
2478 4659 2.795231 TTTCTCAGGCTCAAGGGATG 57.205 50.000 0.00 0.00 0.00 3.51
2479 4660 5.456921 TTTATTTCTCAGGCTCAAGGGAT 57.543 39.130 0.00 0.00 0.00 3.85
2480 4661 4.927267 TTTATTTCTCAGGCTCAAGGGA 57.073 40.909 0.00 0.00 0.00 4.20
2481 4662 7.645058 TTATTTTATTTCTCAGGCTCAAGGG 57.355 36.000 0.00 0.00 0.00 3.95
2499 4680 9.687210 CTGCATGCTGTGTGATATTATTATTTT 57.313 29.630 20.33 0.00 0.00 1.82
2500 4681 8.853126 ACTGCATGCTGTGTGATATTATTATTT 58.147 29.630 27.02 0.00 0.00 1.40
2501 4682 8.400184 ACTGCATGCTGTGTGATATTATTATT 57.600 30.769 27.02 0.00 0.00 1.40
2502 4683 7.991084 ACTGCATGCTGTGTGATATTATTAT 57.009 32.000 27.02 0.00 0.00 1.28
2503 4684 7.930865 TGTACTGCATGCTGTGTGATATTATTA 59.069 33.333 32.92 11.46 0.00 0.98
2504 4685 6.767423 TGTACTGCATGCTGTGTGATATTATT 59.233 34.615 32.92 10.09 0.00 1.40
2505 4686 6.203530 GTGTACTGCATGCTGTGTGATATTAT 59.796 38.462 32.92 10.54 0.00 1.28
2506 4687 5.523552 GTGTACTGCATGCTGTGTGATATTA 59.476 40.000 32.92 13.24 0.00 0.98
2507 4688 4.333649 GTGTACTGCATGCTGTGTGATATT 59.666 41.667 32.92 11.84 0.00 1.28
2508 4689 3.873361 GTGTACTGCATGCTGTGTGATAT 59.127 43.478 32.92 12.49 0.00 1.63
2509 4690 3.261580 GTGTACTGCATGCTGTGTGATA 58.738 45.455 32.92 15.23 0.00 2.15
2510 4691 2.079158 GTGTACTGCATGCTGTGTGAT 58.921 47.619 32.92 13.79 0.00 3.06
2511 4692 1.511850 GTGTACTGCATGCTGTGTGA 58.488 50.000 32.92 15.91 0.00 3.58
2512 4693 0.164432 CGTGTACTGCATGCTGTGTG 59.836 55.000 32.92 18.72 0.00 3.82
2513 4694 2.532186 CGTGTACTGCATGCTGTGT 58.468 52.632 32.92 23.06 0.00 3.72
2531 4712 2.053638 CGATCAACGCGCTCATGC 60.054 61.111 5.73 0.00 34.51 4.06
2540 4721 2.169789 CAGGCAGGAGCGATCAACG 61.170 63.158 1.84 0.00 43.41 4.10
2541 4722 0.809241 CTCAGGCAGGAGCGATCAAC 60.809 60.000 1.84 0.00 43.41 3.18
2542 4723 1.260538 ACTCAGGCAGGAGCGATCAA 61.261 55.000 1.84 0.00 43.41 2.57
2543 4724 1.670949 GACTCAGGCAGGAGCGATCA 61.671 60.000 1.84 0.00 43.41 2.92
2544 4725 1.067250 GACTCAGGCAGGAGCGATC 59.933 63.158 6.16 0.00 43.41 3.69
2545 4726 1.674764 CTGACTCAGGCAGGAGCGAT 61.675 60.000 0.00 0.00 43.41 4.58
2546 4727 2.283173 TGACTCAGGCAGGAGCGA 60.283 61.111 6.16 0.00 43.41 4.93
2547 4728 2.183811 CTGACTCAGGCAGGAGCG 59.816 66.667 0.00 0.00 43.41 5.03
2556 4737 0.539051 AAATCGGAGGCCTGACTCAG 59.461 55.000 12.00 0.00 39.27 3.35
2557 4738 0.984230 AAAATCGGAGGCCTGACTCA 59.016 50.000 12.00 0.00 39.27 3.41
2558 4739 1.373570 CAAAATCGGAGGCCTGACTC 58.626 55.000 12.00 0.00 36.76 3.36
2559 4740 0.035056 CCAAAATCGGAGGCCTGACT 60.035 55.000 12.00 0.00 0.00 3.41
2560 4741 0.322546 ACCAAAATCGGAGGCCTGAC 60.323 55.000 12.00 0.79 0.00 3.51
2561 4742 0.322456 CACCAAAATCGGAGGCCTGA 60.322 55.000 12.00 1.27 0.00 3.86
2562 4743 1.315257 CCACCAAAATCGGAGGCCTG 61.315 60.000 12.00 0.00 29.45 4.85
2563 4744 1.000896 CCACCAAAATCGGAGGCCT 60.001 57.895 3.86 3.86 29.45 5.19
2564 4745 3.603365 CCACCAAAATCGGAGGCC 58.397 61.111 0.00 0.00 29.45 5.19
2566 4747 1.000896 AGGCCACCAAAATCGGAGG 60.001 57.895 5.01 0.00 39.63 4.30
2567 4748 0.322456 TCAGGCCACCAAAATCGGAG 60.322 55.000 5.01 0.00 0.00 4.63
2568 4749 0.608035 GTCAGGCCACCAAAATCGGA 60.608 55.000 5.01 0.00 0.00 4.55
2569 4750 0.609131 AGTCAGGCCACCAAAATCGG 60.609 55.000 5.01 0.00 0.00 4.18
2570 4751 0.804989 GAGTCAGGCCACCAAAATCG 59.195 55.000 5.01 0.00 0.00 3.34
2571 4752 1.177401 GGAGTCAGGCCACCAAAATC 58.823 55.000 5.01 0.00 0.00 2.17
2572 4753 0.609131 CGGAGTCAGGCCACCAAAAT 60.609 55.000 5.01 0.00 0.00 1.82
2573 4754 1.228124 CGGAGTCAGGCCACCAAAA 60.228 57.895 5.01 0.00 0.00 2.44
2574 4755 2.144078 TCGGAGTCAGGCCACCAAA 61.144 57.895 5.01 0.00 0.00 3.28
2575 4756 2.525629 TCGGAGTCAGGCCACCAA 60.526 61.111 5.01 0.00 0.00 3.67
2576 4757 2.435120 TAGTCGGAGTCAGGCCACCA 62.435 60.000 5.01 0.00 0.00 4.17
2577 4758 1.255667 TTAGTCGGAGTCAGGCCACC 61.256 60.000 5.01 0.00 0.00 4.61
2578 4759 0.824759 ATTAGTCGGAGTCAGGCCAC 59.175 55.000 5.01 0.00 0.00 5.01
2579 4760 1.568504 AATTAGTCGGAGTCAGGCCA 58.431 50.000 5.01 0.00 0.00 5.36
2580 4761 2.546162 GCTAATTAGTCGGAGTCAGGCC 60.546 54.545 13.91 0.00 0.00 5.19
2581 4762 2.362717 AGCTAATTAGTCGGAGTCAGGC 59.637 50.000 13.91 0.00 0.00 4.85
2582 4763 3.797184 GCAGCTAATTAGTCGGAGTCAGG 60.797 52.174 13.91 0.00 0.00 3.86
2583 4764 3.376540 GCAGCTAATTAGTCGGAGTCAG 58.623 50.000 13.91 0.00 0.00 3.51
2584 4765 2.100916 GGCAGCTAATTAGTCGGAGTCA 59.899 50.000 13.91 0.00 0.00 3.41
2585 4766 2.745102 GGCAGCTAATTAGTCGGAGTC 58.255 52.381 13.91 0.00 0.00 3.36
2586 4767 1.067212 CGGCAGCTAATTAGTCGGAGT 59.933 52.381 13.91 0.00 0.00 3.85
2587 4768 1.603172 CCGGCAGCTAATTAGTCGGAG 60.603 57.143 22.20 10.59 38.42 4.63
2588 4769 0.387929 CCGGCAGCTAATTAGTCGGA 59.612 55.000 22.20 0.00 38.42 4.55
2589 4770 0.600255 CCCGGCAGCTAATTAGTCGG 60.600 60.000 20.90 20.90 36.23 4.79
2590 4771 0.104304 ACCCGGCAGCTAATTAGTCG 59.896 55.000 13.91 11.84 0.00 4.18
2591 4772 1.138266 TCACCCGGCAGCTAATTAGTC 59.862 52.381 13.91 6.58 0.00 2.59
2592 4773 1.139058 CTCACCCGGCAGCTAATTAGT 59.861 52.381 13.91 0.00 0.00 2.24
2593 4774 1.871080 CTCACCCGGCAGCTAATTAG 58.129 55.000 8.20 8.20 0.00 1.73
2594 4775 0.179056 GCTCACCCGGCAGCTAATTA 60.179 55.000 10.25 0.00 32.48 1.40
2595 4776 1.452108 GCTCACCCGGCAGCTAATT 60.452 57.895 10.25 0.00 32.48 1.40
2596 4777 2.190578 GCTCACCCGGCAGCTAAT 59.809 61.111 10.25 0.00 32.48 1.73
2597 4778 3.003173 AGCTCACCCGGCAGCTAA 61.003 61.111 16.78 0.00 44.45 3.09
2598 4779 3.461773 GAGCTCACCCGGCAGCTA 61.462 66.667 17.93 0.00 46.31 3.32
2601 4782 4.463879 CCTGAGCTCACCCGGCAG 62.464 72.222 13.74 0.54 0.00 4.85
2603 4784 4.459089 GACCTGAGCTCACCCGGC 62.459 72.222 13.74 1.04 0.00 6.13
2604 4785 2.997315 TGACCTGAGCTCACCCGG 60.997 66.667 13.74 15.58 0.00 5.73
2605 4786 2.575993 CTGACCTGAGCTCACCCG 59.424 66.667 13.74 3.03 0.00 5.28
2606 4787 2.985456 CCTGACCTGAGCTCACCC 59.015 66.667 13.74 5.32 0.00 4.61
2607 4788 2.267324 GCCTGACCTGAGCTCACC 59.733 66.667 13.74 5.70 0.00 4.02
2608 4789 1.079266 CAGCCTGACCTGAGCTCAC 60.079 63.158 13.74 3.82 33.70 3.51
2609 4790 2.952293 GCAGCCTGACCTGAGCTCA 61.952 63.158 17.19 17.19 33.70 4.26
2610 4791 2.125188 GCAGCCTGACCTGAGCTC 60.125 66.667 6.82 6.82 33.70 4.09
2611 4792 2.607134 AGCAGCCTGACCTGAGCT 60.607 61.111 0.00 0.00 37.32 4.09
2612 4793 2.436292 CAGCAGCCTGACCTGAGC 60.436 66.667 0.00 0.00 41.77 4.26
2613 4794 3.385469 TCAGCAGCCTGACCTGAG 58.615 61.111 0.00 0.00 42.98 3.35
2619 4800 2.297033 GACCAATTTTTCAGCAGCCTGA 59.703 45.455 0.00 0.00 46.03 3.86
2620 4801 2.036217 TGACCAATTTTTCAGCAGCCTG 59.964 45.455 0.00 0.00 40.54 4.85
2621 4802 2.298163 CTGACCAATTTTTCAGCAGCCT 59.702 45.455 1.05 0.00 33.23 4.58
2622 4803 2.611224 CCTGACCAATTTTTCAGCAGCC 60.611 50.000 7.34 0.00 38.36 4.85
2623 4804 2.680577 CCTGACCAATTTTTCAGCAGC 58.319 47.619 7.34 0.00 38.36 5.25
2624 4805 2.036217 TGCCTGACCAATTTTTCAGCAG 59.964 45.455 7.34 0.00 38.36 4.24
2625 4806 2.037901 TGCCTGACCAATTTTTCAGCA 58.962 42.857 7.34 6.75 38.36 4.41
2626 4807 2.407090 GTGCCTGACCAATTTTTCAGC 58.593 47.619 7.34 4.82 38.36 4.26
2627 4808 3.030668 GGTGCCTGACCAATTTTTCAG 57.969 47.619 6.20 6.20 45.34 3.02
2637 4818 1.040339 TGTTTGGTTGGTGCCTGACC 61.040 55.000 7.19 7.19 46.37 4.02
2638 4819 0.820871 TTGTTTGGTTGGTGCCTGAC 59.179 50.000 0.00 0.00 0.00 3.51
2639 4820 1.110442 CTTGTTTGGTTGGTGCCTGA 58.890 50.000 0.00 0.00 0.00 3.86
2640 4821 1.110442 TCTTGTTTGGTTGGTGCCTG 58.890 50.000 0.00 0.00 0.00 4.85
2641 4822 1.111277 GTCTTGTTTGGTTGGTGCCT 58.889 50.000 0.00 0.00 0.00 4.75
2642 4823 0.248866 CGTCTTGTTTGGTTGGTGCC 60.249 55.000 0.00 0.00 0.00 5.01
2643 4824 0.454196 ACGTCTTGTTTGGTTGGTGC 59.546 50.000 0.00 0.00 0.00 5.01
2644 4825 2.289547 CCTACGTCTTGTTTGGTTGGTG 59.710 50.000 0.00 0.00 0.00 4.17
2645 4826 2.567985 CCTACGTCTTGTTTGGTTGGT 58.432 47.619 0.00 0.00 0.00 3.67
2646 4827 1.265905 GCCTACGTCTTGTTTGGTTGG 59.734 52.381 0.00 0.00 0.00 3.77
2647 4828 1.265905 GGCCTACGTCTTGTTTGGTTG 59.734 52.381 0.00 0.00 0.00 3.77
2648 4829 1.134037 TGGCCTACGTCTTGTTTGGTT 60.134 47.619 3.32 0.00 0.00 3.67
2649 4830 0.470766 TGGCCTACGTCTTGTTTGGT 59.529 50.000 3.32 0.00 0.00 3.67
2650 4831 1.156736 CTGGCCTACGTCTTGTTTGG 58.843 55.000 3.32 0.00 0.00 3.28
2651 4832 1.531149 CACTGGCCTACGTCTTGTTTG 59.469 52.381 3.32 0.00 0.00 2.93
2652 4833 1.140252 ACACTGGCCTACGTCTTGTTT 59.860 47.619 3.32 0.00 0.00 2.83
2653 4834 0.756903 ACACTGGCCTACGTCTTGTT 59.243 50.000 3.32 0.00 0.00 2.83
2654 4835 0.317479 GACACTGGCCTACGTCTTGT 59.683 55.000 3.32 0.00 0.00 3.16
2655 4836 0.389948 GGACACTGGCCTACGTCTTG 60.390 60.000 3.32 0.00 0.00 3.02
2656 4837 1.874345 CGGACACTGGCCTACGTCTT 61.874 60.000 3.32 0.00 0.00 3.01
2657 4838 2.341101 CGGACACTGGCCTACGTCT 61.341 63.158 3.32 0.00 0.00 4.18
2658 4839 2.181021 CGGACACTGGCCTACGTC 59.819 66.667 3.32 7.39 0.00 4.34
2659 4840 3.379445 CCGGACACTGGCCTACGT 61.379 66.667 3.32 0.00 0.00 3.57
2666 4847 2.743928 GAGCAAGCCGGACACTGG 60.744 66.667 5.05 0.00 0.00 4.00
2667 4848 2.743928 GGAGCAAGCCGGACACTG 60.744 66.667 5.05 0.00 0.00 3.66
2668 4849 4.021925 GGGAGCAAGCCGGACACT 62.022 66.667 5.05 0.00 0.00 3.55
2677 4858 3.746949 CTGCCTAGCCGGGAGCAAG 62.747 68.421 2.18 0.00 44.76 4.01
2678 4859 3.785859 CTGCCTAGCCGGGAGCAA 61.786 66.667 2.18 0.00 44.76 3.91
2682 4863 0.691078 AGAAATCTGCCTAGCCGGGA 60.691 55.000 2.18 0.00 0.00 5.14
2683 4864 0.250081 GAGAAATCTGCCTAGCCGGG 60.250 60.000 2.18 0.00 0.00 5.73
2684 4865 0.755686 AGAGAAATCTGCCTAGCCGG 59.244 55.000 0.00 0.00 0.00 6.13
2685 4866 2.611225 AAGAGAAATCTGCCTAGCCG 57.389 50.000 0.00 0.00 0.00 5.52
2686 4867 3.244387 CCCTAAGAGAAATCTGCCTAGCC 60.244 52.174 0.00 0.00 0.00 3.93
2687 4868 3.389656 ACCCTAAGAGAAATCTGCCTAGC 59.610 47.826 0.00 0.00 0.00 3.42
2688 4869 5.279256 GCTACCCTAAGAGAAATCTGCCTAG 60.279 48.000 0.00 0.00 0.00 3.02
2689 4870 4.589374 GCTACCCTAAGAGAAATCTGCCTA 59.411 45.833 0.00 0.00 0.00 3.93
2690 4871 3.389656 GCTACCCTAAGAGAAATCTGCCT 59.610 47.826 0.00 0.00 0.00 4.75
2691 4872 3.134804 TGCTACCCTAAGAGAAATCTGCC 59.865 47.826 0.00 0.00 0.00 4.85
2692 4873 4.408182 TGCTACCCTAAGAGAAATCTGC 57.592 45.455 0.00 0.00 0.00 4.26
2693 4874 5.119694 GGTTGCTACCCTAAGAGAAATCTG 58.880 45.833 5.98 0.00 38.60 2.90
2694 4875 4.783227 TGGTTGCTACCCTAAGAGAAATCT 59.217 41.667 15.00 0.00 44.35 2.40
2695 4876 5.099042 TGGTTGCTACCCTAAGAGAAATC 57.901 43.478 15.00 0.00 44.35 2.17
2696 4877 5.514500 TTGGTTGCTACCCTAAGAGAAAT 57.486 39.130 15.00 0.00 44.35 2.17
2697 4878 4.986054 TTGGTTGCTACCCTAAGAGAAA 57.014 40.909 15.00 0.00 44.35 2.52
2698 4879 4.103469 TGTTTGGTTGCTACCCTAAGAGAA 59.897 41.667 15.00 0.00 44.35 2.87
2699 4880 3.649023 TGTTTGGTTGCTACCCTAAGAGA 59.351 43.478 15.00 0.00 44.35 3.10
2700 4881 4.003648 CTGTTTGGTTGCTACCCTAAGAG 58.996 47.826 15.00 12.16 44.35 2.85
2701 4882 3.809324 GCTGTTTGGTTGCTACCCTAAGA 60.809 47.826 15.00 6.87 44.35 2.10
2702 4883 2.488153 GCTGTTTGGTTGCTACCCTAAG 59.512 50.000 15.00 8.18 44.35 2.18
2703 4884 2.510613 GCTGTTTGGTTGCTACCCTAA 58.489 47.619 15.00 6.40 44.35 2.69
2704 4885 1.271707 GGCTGTTTGGTTGCTACCCTA 60.272 52.381 15.00 0.00 44.35 3.53
2705 4886 0.539669 GGCTGTTTGGTTGCTACCCT 60.540 55.000 15.00 0.00 44.35 4.34
2706 4887 1.532604 GGGCTGTTTGGTTGCTACCC 61.533 60.000 15.00 0.00 44.35 3.69
2707 4888 0.539669 AGGGCTGTTTGGTTGCTACC 60.540 55.000 10.70 10.70 45.26 3.18
2708 4889 1.328279 AAGGGCTGTTTGGTTGCTAC 58.672 50.000 0.00 0.00 0.00 3.58
2709 4890 2.080654 AAAGGGCTGTTTGGTTGCTA 57.919 45.000 0.00 0.00 0.00 3.49
2710 4891 2.080654 TAAAGGGCTGTTTGGTTGCT 57.919 45.000 0.00 0.00 0.00 3.91
2711 4892 2.298729 TGATAAAGGGCTGTTTGGTTGC 59.701 45.455 0.00 0.00 0.00 4.17
2712 4893 4.202202 TGTTGATAAAGGGCTGTTTGGTTG 60.202 41.667 0.00 0.00 0.00 3.77
2713 4894 3.964031 TGTTGATAAAGGGCTGTTTGGTT 59.036 39.130 0.00 0.00 0.00 3.67
2714 4895 3.571590 TGTTGATAAAGGGCTGTTTGGT 58.428 40.909 0.00 0.00 0.00 3.67
2715 4896 4.599047 TTGTTGATAAAGGGCTGTTTGG 57.401 40.909 0.00 0.00 0.00 3.28
2716 4897 5.782047 TCATTGTTGATAAAGGGCTGTTTG 58.218 37.500 0.00 0.00 0.00 2.93
2717 4898 6.438425 AGATCATTGTTGATAAAGGGCTGTTT 59.562 34.615 0.00 0.00 42.73 2.83
2718 4899 5.954150 AGATCATTGTTGATAAAGGGCTGTT 59.046 36.000 0.00 0.00 42.73 3.16
2719 4900 5.513233 AGATCATTGTTGATAAAGGGCTGT 58.487 37.500 0.00 0.00 42.73 4.40
2720 4901 7.756395 ATAGATCATTGTTGATAAAGGGCTG 57.244 36.000 0.00 0.00 42.73 4.85
2721 4902 8.000709 TGAATAGATCATTGTTGATAAAGGGCT 58.999 33.333 0.00 0.00 42.73 5.19
2722 4903 8.169977 TGAATAGATCATTGTTGATAAAGGGC 57.830 34.615 0.00 0.00 42.73 5.19
2724 4905 9.622004 GCATGAATAGATCATTGTTGATAAAGG 57.378 33.333 0.00 0.00 46.85 3.11
2824 5005 0.957395 AGTGATTTCGGCTGGTGCTG 60.957 55.000 0.00 0.00 46.48 4.41
2825 5006 0.957395 CAGTGATTTCGGCTGGTGCT 60.957 55.000 0.00 0.00 39.59 4.40
2826 5007 0.955428 TCAGTGATTTCGGCTGGTGC 60.955 55.000 0.00 0.00 38.76 5.01
2827 5008 1.522668 TTCAGTGATTTCGGCTGGTG 58.477 50.000 0.00 0.00 0.00 4.17
2828 5009 2.270352 TTTCAGTGATTTCGGCTGGT 57.730 45.000 0.00 0.00 0.00 4.00
2829 5010 3.191162 TGAATTTCAGTGATTTCGGCTGG 59.809 43.478 0.00 0.00 0.00 4.85
2830 5011 4.409570 CTGAATTTCAGTGATTTCGGCTG 58.590 43.478 16.71 0.00 39.58 4.85
2831 5012 4.691860 CTGAATTTCAGTGATTTCGGCT 57.308 40.909 16.71 0.00 39.58 5.52
2843 5024 9.820725 AAAATCACTGAATTTCACTGAATTTCA 57.179 25.926 20.31 20.31 38.62 2.69
2849 5030 9.734620 CAAACTAAAATCACTGAATTTCACTGA 57.265 29.630 10.05 10.05 0.00 3.41
2850 5031 8.482429 GCAAACTAAAATCACTGAATTTCACTG 58.518 33.333 0.00 0.00 0.00 3.66
2851 5032 8.196771 TGCAAACTAAAATCACTGAATTTCACT 58.803 29.630 0.00 0.00 0.00 3.41
2852 5033 8.351495 TGCAAACTAAAATCACTGAATTTCAC 57.649 30.769 0.00 0.00 0.00 3.18
2853 5034 9.545105 AATGCAAACTAAAATCACTGAATTTCA 57.455 25.926 0.00 0.00 0.00 2.69
2856 5037 8.702438 CGAAATGCAAACTAAAATCACTGAATT 58.298 29.630 0.00 0.00 0.00 2.17
2857 5038 7.329226 CCGAAATGCAAACTAAAATCACTGAAT 59.671 33.333 0.00 0.00 0.00 2.57
2858 5039 6.640499 CCGAAATGCAAACTAAAATCACTGAA 59.360 34.615 0.00 0.00 0.00 3.02
2859 5040 6.148948 CCGAAATGCAAACTAAAATCACTGA 58.851 36.000 0.00 0.00 0.00 3.41
2860 5041 5.164061 GCCGAAATGCAAACTAAAATCACTG 60.164 40.000 0.00 0.00 0.00 3.66
2861 5042 4.923281 GCCGAAATGCAAACTAAAATCACT 59.077 37.500 0.00 0.00 0.00 3.41
2862 5043 4.091365 GGCCGAAATGCAAACTAAAATCAC 59.909 41.667 0.00 0.00 0.00 3.06
2863 5044 4.241681 GGCCGAAATGCAAACTAAAATCA 58.758 39.130 0.00 0.00 0.00 2.57
2864 5045 4.241681 TGGCCGAAATGCAAACTAAAATC 58.758 39.130 0.00 0.00 0.00 2.17
2865 5046 4.264460 TGGCCGAAATGCAAACTAAAAT 57.736 36.364 0.00 0.00 0.00 1.82
2866 5047 3.735237 TGGCCGAAATGCAAACTAAAA 57.265 38.095 0.00 0.00 0.00 1.52
2867 5048 3.735237 TTGGCCGAAATGCAAACTAAA 57.265 38.095 0.00 0.00 0.00 1.85
2868 5049 3.553922 CCTTTGGCCGAAATGCAAACTAA 60.554 43.478 6.92 0.00 0.00 2.24
2869 5050 2.029470 CCTTTGGCCGAAATGCAAACTA 60.029 45.455 6.92 0.00 0.00 2.24
2870 5051 1.270252 CCTTTGGCCGAAATGCAAACT 60.270 47.619 6.92 0.00 0.00 2.66
2871 5052 1.147473 CCTTTGGCCGAAATGCAAAC 58.853 50.000 6.92 0.00 0.00 2.93
2872 5053 0.602372 GCCTTTGGCCGAAATGCAAA 60.602 50.000 17.97 2.61 44.06 3.68
2873 5054 1.005156 GCCTTTGGCCGAAATGCAA 60.005 52.632 17.97 0.00 44.06 4.08
2874 5055 2.656055 GCCTTTGGCCGAAATGCA 59.344 55.556 17.97 0.00 44.06 3.96
2883 5064 9.922264 ATTCAAGTGAATATTTCGGCCTTTGGC 62.922 40.741 0.00 0.00 44.39 4.52
2884 5065 4.157656 TCAAGTGAATATTTCGGCCTTTGG 59.842 41.667 0.00 0.00 0.00 3.28
2885 5066 5.309323 TCAAGTGAATATTTCGGCCTTTG 57.691 39.130 0.00 0.00 0.00 2.77
2886 5067 5.975693 TTCAAGTGAATATTTCGGCCTTT 57.024 34.783 0.00 0.00 0.00 3.11
2887 5068 6.530019 AATTCAAGTGAATATTTCGGCCTT 57.470 33.333 6.95 0.00 43.41 4.35
2888 5069 6.530019 AAATTCAAGTGAATATTTCGGCCT 57.470 33.333 6.95 0.00 43.41 5.19
2889 5070 8.871686 ATTAAATTCAAGTGAATATTTCGGCC 57.128 30.769 6.95 0.00 43.41 6.13
2955 5136 8.243426 GCAATTTCAATAGTACACAGGAAATCA 58.757 33.333 12.76 0.00 34.81 2.57
2956 5137 8.462016 AGCAATTTCAATAGTACACAGGAAATC 58.538 33.333 12.76 5.51 34.81 2.17
2957 5138 8.246180 CAGCAATTTCAATAGTACACAGGAAAT 58.754 33.333 0.00 3.00 36.75 2.17
2958 5139 7.446931 TCAGCAATTTCAATAGTACACAGGAAA 59.553 33.333 0.00 0.60 0.00 3.13
2959 5140 6.939730 TCAGCAATTTCAATAGTACACAGGAA 59.060 34.615 0.00 0.00 0.00 3.36
2960 5141 6.472016 TCAGCAATTTCAATAGTACACAGGA 58.528 36.000 0.00 0.00 0.00 3.86
2961 5142 6.741992 TCAGCAATTTCAATAGTACACAGG 57.258 37.500 0.00 0.00 0.00 4.00
2969 5150 9.925268 GCCAAAATATTTCAGCAATTTCAATAG 57.075 29.630 14.39 0.00 0.00 1.73
2970 5151 8.891720 GGCCAAAATATTTCAGCAATTTCAATA 58.108 29.630 18.73 0.00 0.00 1.90
2971 5152 7.414319 CGGCCAAAATATTTCAGCAATTTCAAT 60.414 33.333 18.73 0.00 0.00 2.57
2972 5153 6.128336 CGGCCAAAATATTTCAGCAATTTCAA 60.128 34.615 18.73 0.00 0.00 2.69
2973 5154 5.350914 CGGCCAAAATATTTCAGCAATTTCA 59.649 36.000 18.73 0.00 0.00 2.69
2974 5155 5.580297 TCGGCCAAAATATTTCAGCAATTTC 59.420 36.000 18.73 5.61 0.00 2.17
2975 5156 5.486526 TCGGCCAAAATATTTCAGCAATTT 58.513 33.333 18.73 0.00 0.00 1.82
2976 5157 5.083533 TCGGCCAAAATATTTCAGCAATT 57.916 34.783 18.73 0.00 0.00 2.32
2977 5158 4.734398 TCGGCCAAAATATTTCAGCAAT 57.266 36.364 18.73 0.00 0.00 3.56
2978 5159 4.527509 TTCGGCCAAAATATTTCAGCAA 57.472 36.364 18.73 7.49 0.00 3.91
2979 5160 4.241681 GTTTCGGCCAAAATATTTCAGCA 58.758 39.130 18.73 2.88 0.00 4.41
2980 5161 3.303229 CGTTTCGGCCAAAATATTTCAGC 59.697 43.478 2.24 11.95 0.00 4.26
2981 5162 4.481463 ACGTTTCGGCCAAAATATTTCAG 58.519 39.130 2.24 0.00 0.00 3.02
2982 5163 4.506886 ACGTTTCGGCCAAAATATTTCA 57.493 36.364 2.24 0.00 0.00 2.69
2983 5164 8.791355 ATATTACGTTTCGGCCAAAATATTTC 57.209 30.769 2.24 0.00 0.00 2.17
2984 5165 9.589111 AAATATTACGTTTCGGCCAAAATATTT 57.411 25.926 2.24 11.26 35.11 1.40
2985 5166 9.240159 GAAATATTACGTTTCGGCCAAAATATT 57.760 29.630 2.24 6.54 32.32 1.28
2986 5167 8.407064 TGAAATATTACGTTTCGGCCAAAATAT 58.593 29.630 2.24 1.02 38.18 1.28
2987 5168 7.759465 TGAAATATTACGTTTCGGCCAAAATA 58.241 30.769 2.24 0.00 38.18 1.40
2988 5169 6.622549 TGAAATATTACGTTTCGGCCAAAAT 58.377 32.000 2.24 0.00 38.18 1.82
2989 5170 6.010294 TGAAATATTACGTTTCGGCCAAAA 57.990 33.333 2.24 0.00 38.18 2.44
2990 5171 5.181622 ACTGAAATATTACGTTTCGGCCAAA 59.818 36.000 2.24 0.00 42.81 3.28
2991 5172 4.696402 ACTGAAATATTACGTTTCGGCCAA 59.304 37.500 2.24 0.00 42.81 4.52
2992 5173 4.093703 CACTGAAATATTACGTTTCGGCCA 59.906 41.667 2.24 0.00 42.81 5.36
2993 5174 4.093850 ACACTGAAATATTACGTTTCGGCC 59.906 41.667 0.00 0.00 42.81 6.13
2994 5175 5.063060 AGACACTGAAATATTACGTTTCGGC 59.937 40.000 0.00 0.00 42.81 5.54
2995 5176 6.642683 AGACACTGAAATATTACGTTTCGG 57.357 37.500 0.00 0.00 43.98 4.30
2996 5177 8.390854 AGTAGACACTGAAATATTACGTTTCG 57.609 34.615 0.00 0.00 38.18 3.46
3011 5192 9.552114 GAATTTCATTCATTTCAGTAGACACTG 57.448 33.333 0.00 0.00 44.40 3.66
3012 5193 9.288576 TGAATTTCATTCATTTCAGTAGACACT 57.711 29.630 0.00 0.00 43.84 3.55
3034 5215 9.635520 GTGAGATTTCAATGAAATTCACTGAAT 57.364 29.630 30.04 10.19 41.42 2.57
3035 5216 8.853126 AGTGAGATTTCAATGAAATTCACTGAA 58.147 29.630 33.87 14.78 45.09 3.02
3036 5217 8.400184 AGTGAGATTTCAATGAAATTCACTGA 57.600 30.769 33.87 19.42 45.09 3.41
3059 5240 4.023291 ACACCATGGTTTTCACTTTCAGT 58.977 39.130 16.84 2.06 0.00 3.41
3060 5241 4.362279 CACACCATGGTTTTCACTTTCAG 58.638 43.478 16.84 1.33 0.00 3.02
3061 5242 3.131933 CCACACCATGGTTTTCACTTTCA 59.868 43.478 16.84 0.00 44.46 2.69
3062 5243 3.716601 CCACACCATGGTTTTCACTTTC 58.283 45.455 16.84 0.00 44.46 2.62
3063 5244 3.817709 CCACACCATGGTTTTCACTTT 57.182 42.857 16.84 0.00 44.46 2.66
3074 5255 7.920151 CACCACATTTAATATAACCACACCATG 59.080 37.037 0.00 0.00 0.00 3.66
3075 5256 7.617723 ACACCACATTTAATATAACCACACCAT 59.382 33.333 0.00 0.00 0.00 3.55
3076 5257 6.948886 ACACCACATTTAATATAACCACACCA 59.051 34.615 0.00 0.00 0.00 4.17
3077 5258 7.399245 ACACCACATTTAATATAACCACACC 57.601 36.000 0.00 0.00 0.00 4.16
3078 5259 8.301002 ACAACACCACATTTAATATAACCACAC 58.699 33.333 0.00 0.00 0.00 3.82
3079 5260 8.410673 ACAACACCACATTTAATATAACCACA 57.589 30.769 0.00 0.00 0.00 4.17
3080 5261 7.694784 CGACAACACCACATTTAATATAACCAC 59.305 37.037 0.00 0.00 0.00 4.16
3081 5262 7.390996 ACGACAACACCACATTTAATATAACCA 59.609 33.333 0.00 0.00 0.00 3.67
3082 5263 7.754625 ACGACAACACCACATTTAATATAACC 58.245 34.615 0.00 0.00 0.00 2.85
3167 5348 8.515695 AAAGAAGTCAGATGCAATATTCATGA 57.484 30.769 0.00 0.00 0.00 3.07
3230 5411 5.655532 AGTAGTAGCGTCCTATTTTCTTCCA 59.344 40.000 0.00 0.00 0.00 3.53
3244 5425 5.295950 ACTATCATCACGTAGTAGTAGCGT 58.704 41.667 0.00 0.00 41.61 5.07


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.