Multiple sequence alignment - TraesCS5D01G251200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G251200 chr5D 100.000 4116 0 0 1 4116 357063452 357059337 0.000000e+00 7601.0
1 TraesCS5D01G251200 chr5D 80.000 205 34 5 1186 1388 357016909 357016710 1.190000e-30 145.0
2 TraesCS5D01G251200 chr5D 78.469 209 36 7 1182 1388 356911388 356911187 1.200000e-25 128.0
3 TraesCS5D01G251200 chr5D 75.839 149 26 6 3760 3898 367483216 367483068 2.660000e-07 67.6
4 TraesCS5D01G251200 chr5B 93.143 2771 119 23 519 3233 421835319 421832564 0.000000e+00 3999.0
5 TraesCS5D01G251200 chr5B 85.503 338 32 3 3316 3642 421832481 421832150 1.830000e-88 337.0
6 TraesCS5D01G251200 chr5B 92.670 191 13 1 3926 4116 421824581 421824392 1.460000e-69 274.0
7 TraesCS5D01G251200 chr5B 88.839 224 12 7 275 493 421835521 421835306 3.160000e-66 263.0
8 TraesCS5D01G251200 chr5B 84.420 276 25 11 4 278 421836020 421835762 5.280000e-64 255.0
9 TraesCS5D01G251200 chr5B 81.068 206 30 7 1186 1388 421717889 421717690 5.510000e-34 156.0
10 TraesCS5D01G251200 chr5B 78.571 210 36 7 1181 1388 421697756 421697554 3.340000e-26 130.0
11 TraesCS5D01G251200 chr5A 90.160 2683 167 50 614 3233 458317713 458315065 0.000000e+00 3402.0
12 TraesCS5D01G251200 chr5A 91.163 215 17 1 3901 4115 458300974 458300762 1.450000e-74 291.0
13 TraesCS5D01G251200 chr5A 91.979 187 15 0 3907 4093 458296820 458296634 3.160000e-66 263.0
14 TraesCS5D01G251200 chr5A 88.298 188 16 4 309 493 458318147 458317963 1.930000e-53 220.0
15 TraesCS5D01G251200 chr5A 80.976 205 32 5 1186 1388 456068739 456068938 5.510000e-34 156.0
16 TraesCS5D01G251200 chr5A 79.803 203 34 5 1188 1388 458273859 458273662 1.540000e-29 141.0
17 TraesCS5D01G251200 chr5A 79.512 205 35 5 1186 1388 458279116 458278917 5.550000e-29 139.0
18 TraesCS5D01G251200 chr5A 77.990 209 37 6 1181 1387 458227708 458227507 5.590000e-24 122.0
19 TraesCS5D01G251200 chr2A 80.909 220 40 2 1679 1897 80476236 80476454 5.470000e-39 172.0
20 TraesCS5D01G251200 chr2D 80.822 219 40 2 1680 1897 79874356 79874573 1.970000e-38 171.0
21 TraesCS5D01G251200 chr2D 78.723 235 48 2 1682 1915 42933927 42933694 5.510000e-34 156.0
22 TraesCS5D01G251200 chr2B 80.365 219 41 2 1680 1897 131286734 131286951 9.150000e-37 165.0
23 TraesCS5D01G251200 chr3D 82.979 94 15 1 3784 3877 300178974 300179066 2.640000e-12 84.2
24 TraesCS5D01G251200 chr3D 100.000 28 0 0 1455 1482 105124462 105124489 7.000000e-03 52.8
25 TraesCS5D01G251200 chr3A 79.000 100 19 2 3784 3882 594648227 594648129 2.660000e-07 67.6
26 TraesCS5D01G251200 chr3B 75.342 146 23 8 3761 3894 160825654 160825510 1.600000e-04 58.4
27 TraesCS5D01G251200 chr3B 100.000 28 0 0 1455 1482 156646775 156646802 7.000000e-03 52.8
28 TraesCS5D01G251200 chr1B 94.444 36 2 0 1455 1490 410818696 410818731 5.750000e-04 56.5
29 TraesCS5D01G251200 chr4A 96.875 32 1 0 3761 3792 625899342 625899373 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G251200 chr5D 357059337 357063452 4115 True 7601.0 7601 100.00000 1 4116 1 chr5D.!!$R3 4115
1 TraesCS5D01G251200 chr5B 421832150 421836020 3870 True 1213.5 3999 87.97625 4 3642 4 chr5B.!!$R4 3638
2 TraesCS5D01G251200 chr5A 458315065 458318147 3082 True 1811.0 3402 89.22900 309 3233 2 chr5A.!!$R5 2924
3 TraesCS5D01G251200 chr5A 458296634 458300974 4340 True 277.0 291 91.57100 3901 4115 2 chr5A.!!$R4 214

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
57 59 0.316772 GCTTACGCGCGACTATGAGA 60.317 55.0 39.36 11.01 0.00 3.27 F
947 1410 0.532862 AGCACCTCGAAACACCACTG 60.533 55.0 0.00 0.00 0.00 3.66 F
1606 2105 0.688487 TGGAACAACGGTTAGGGAGG 59.312 55.0 0.00 0.00 37.36 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1362 1832 0.242825 CGTTAAGCCACAGGACGAGA 59.757 55.000 0.0 0.0 35.90 4.04 R
2047 2554 1.638070 TCATCAAGGTATGGGTTGCCA 59.362 47.619 0.0 0.0 31.27 4.92 R
3343 3866 0.893270 TGAAGTGCCATTTCCGGGTG 60.893 55.000 0.0 0.0 0.00 4.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 46 8.321716 GGATCTATAAATAAATCGCTGCTTACG 58.678 37.037 0.00 0.00 0.00 3.18
56 58 0.591488 TGCTTACGCGCGACTATGAG 60.591 55.000 39.36 20.71 39.65 2.90
57 59 0.316772 GCTTACGCGCGACTATGAGA 60.317 55.000 39.36 11.01 0.00 3.27
58 60 1.858798 GCTTACGCGCGACTATGAGAA 60.859 52.381 39.36 14.55 0.00 2.87
60 62 1.012086 TACGCGCGACTATGAGAAGT 58.988 50.000 39.36 12.01 0.00 3.01
61 63 1.012086 ACGCGCGACTATGAGAAGTA 58.988 50.000 39.36 0.00 0.00 2.24
62 64 1.267932 ACGCGCGACTATGAGAAGTAC 60.268 52.381 39.36 0.00 0.00 2.73
64 66 2.376956 GCGCGACTATGAGAAGTACAG 58.623 52.381 12.10 0.00 0.00 2.74
65 67 2.855187 GCGCGACTATGAGAAGTACAGG 60.855 54.545 12.10 0.00 0.00 4.00
66 68 2.355132 CGCGACTATGAGAAGTACAGGT 59.645 50.000 0.00 0.00 0.00 4.00
67 69 3.696898 GCGACTATGAGAAGTACAGGTG 58.303 50.000 0.00 0.00 0.00 4.00
68 70 3.377485 GCGACTATGAGAAGTACAGGTGA 59.623 47.826 0.00 0.00 0.00 4.02
69 71 4.731193 GCGACTATGAGAAGTACAGGTGAC 60.731 50.000 0.00 0.00 0.00 3.67
70 72 4.395231 CGACTATGAGAAGTACAGGTGACA 59.605 45.833 0.00 0.00 0.00 3.58
71 73 5.106277 CGACTATGAGAAGTACAGGTGACAA 60.106 44.000 0.00 0.00 0.00 3.18
72 74 6.026947 ACTATGAGAAGTACAGGTGACAAC 57.973 41.667 0.00 0.00 0.00 3.32
90 92 4.380531 ACAACATATTCAGGCCATAGTCG 58.619 43.478 5.01 0.00 0.00 4.18
128 130 3.317993 GTGTGCTGAAAAGGGTTGTATGT 59.682 43.478 0.00 0.00 0.00 2.29
134 136 5.221244 GCTGAAAAGGGTTGTATGTTGTTCT 60.221 40.000 0.00 0.00 0.00 3.01
144 146 6.863126 GGTTGTATGTTGTTCTCATGAAAAGG 59.137 38.462 0.00 0.00 33.52 3.11
178 180 2.272146 ATCTGGTTTGCGCCGGAT 59.728 55.556 5.05 1.88 46.49 4.18
191 193 1.737236 CGCCGGATGAACATCTTTGAA 59.263 47.619 5.05 0.00 37.92 2.69
196 198 6.329496 GCCGGATGAACATCTTTGAATTTTA 58.671 36.000 5.05 0.00 37.92 1.52
204 206 9.195411 TGAACATCTTTGAATTTTAATCACAGC 57.805 29.630 0.00 0.00 0.00 4.40
205 207 9.195411 GAACATCTTTGAATTTTAATCACAGCA 57.805 29.630 0.00 0.00 0.00 4.41
207 209 9.146984 ACATCTTTGAATTTTAATCACAGCATG 57.853 29.630 0.00 0.00 46.00 4.06
224 226 6.363577 CAGCATGTTTCCGTAATATCTTGT 57.636 37.500 0.00 0.00 0.00 3.16
225 227 6.194463 CAGCATGTTTCCGTAATATCTTGTG 58.806 40.000 0.00 0.00 0.00 3.33
226 228 6.037062 CAGCATGTTTCCGTAATATCTTGTGA 59.963 38.462 0.00 0.00 0.00 3.58
227 229 6.767902 AGCATGTTTCCGTAATATCTTGTGAT 59.232 34.615 0.00 0.00 36.74 3.06
228 230 7.041780 AGCATGTTTCCGTAATATCTTGTGATC 60.042 37.037 0.00 0.00 34.32 2.92
244 246 3.681417 TGTGATCACGAGCAGAATGAAAG 59.319 43.478 20.54 0.00 39.69 2.62
258 260 4.771054 AGAATGAAAGCAAGGCAATTCTCT 59.229 37.500 7.81 2.48 31.29 3.10
259 261 4.715527 ATGAAAGCAAGGCAATTCTCTC 57.284 40.909 7.81 0.00 31.29 3.20
272 274 4.763073 CAATTCTCTCAGGACTGCATGTA 58.237 43.478 0.00 0.00 0.00 2.29
278 280 4.546674 TCTCAGGACTGCATGTAGGAATA 58.453 43.478 15.65 0.00 0.00 1.75
279 281 5.150715 TCTCAGGACTGCATGTAGGAATAT 58.849 41.667 15.65 0.00 0.00 1.28
280 282 5.244851 TCTCAGGACTGCATGTAGGAATATC 59.755 44.000 15.65 2.98 0.00 1.63
282 284 5.244851 TCAGGACTGCATGTAGGAATATCTC 59.755 44.000 15.65 1.57 0.00 2.75
283 285 4.530161 AGGACTGCATGTAGGAATATCTCC 59.470 45.833 15.65 10.46 45.81 3.71
322 568 7.907841 TGCTAGTTTATACAAGGACATAGGA 57.092 36.000 0.00 0.00 0.00 2.94
368 616 5.667626 AGATACAAGGACATGGGTAAGACAT 59.332 40.000 0.00 0.00 0.00 3.06
462 715 8.239314 TGCTAATTATTCGATAGTACTAACGGG 58.761 37.037 26.20 8.97 33.10 5.28
493 746 4.313277 TGTGATCATCGTTCTCATCCTC 57.687 45.455 0.00 0.00 0.00 3.71
494 747 3.701040 TGTGATCATCGTTCTCATCCTCA 59.299 43.478 0.00 0.00 0.00 3.86
495 748 4.047822 GTGATCATCGTTCTCATCCTCAC 58.952 47.826 0.00 0.00 0.00 3.51
496 749 3.701040 TGATCATCGTTCTCATCCTCACA 59.299 43.478 0.00 0.00 0.00 3.58
497 750 4.160252 TGATCATCGTTCTCATCCTCACAA 59.840 41.667 0.00 0.00 0.00 3.33
498 751 4.535526 TCATCGTTCTCATCCTCACAAA 57.464 40.909 0.00 0.00 0.00 2.83
499 752 4.893608 TCATCGTTCTCATCCTCACAAAA 58.106 39.130 0.00 0.00 0.00 2.44
500 753 5.304778 TCATCGTTCTCATCCTCACAAAAA 58.695 37.500 0.00 0.00 0.00 1.94
552 805 5.425539 TCCTCCCATCAAAAGTTAGGACTAG 59.574 44.000 0.00 0.00 34.21 2.57
572 825 0.613853 TCCCTAGTAGCAACGGCAGT 60.614 55.000 0.00 0.00 44.61 4.40
670 1101 9.212641 CATAGGGAAACTCATACAATCATACAG 57.787 37.037 0.00 0.00 0.00 2.74
674 1105 6.316140 GGAAACTCATACAATCATACAGCACA 59.684 38.462 0.00 0.00 0.00 4.57
711 1142 1.895798 TGGTGCTCTCTCCTAACTGTG 59.104 52.381 0.00 0.00 0.00 3.66
716 1147 2.159254 GCTCTCTCCTAACTGTGAGCTG 60.159 54.545 0.00 0.00 42.78 4.24
736 1167 4.702392 CTGTTCTAAGCTTGCGTACAAAG 58.298 43.478 9.86 0.00 34.74 2.77
744 1175 6.404712 AAGCTTGCGTACAAAGTATAACTC 57.595 37.500 0.00 0.00 34.74 3.01
759 1190 4.737855 ATAACTCGACAACATACAGCCT 57.262 40.909 0.00 0.00 0.00 4.58
785 1216 6.504398 CATCTGCAGTATTCAATTGAGCAAT 58.496 36.000 14.67 8.18 0.00 3.56
787 1218 5.001237 TGCAGTATTCAATTGAGCAATGG 57.999 39.130 14.79 4.37 0.00 3.16
788 1219 3.800506 GCAGTATTCAATTGAGCAATGGC 59.199 43.478 8.41 6.32 41.61 4.40
789 1220 4.678574 GCAGTATTCAATTGAGCAATGGCA 60.679 41.667 8.41 0.00 44.61 4.92
817 1258 9.586435 CAGACATGTAGTTTTTCTTTCCTTTTT 57.414 29.630 0.00 0.00 0.00 1.94
857 1320 4.339530 GGTCAGAAGAACTTTTCAAGGCTT 59.660 41.667 0.00 0.00 32.37 4.35
867 1330 4.142381 ACTTTTCAAGGCTTCAACACTGAC 60.142 41.667 0.00 0.00 0.00 3.51
905 1368 7.383300 GTCAAAACTTTCTCCTTCCAATCATTG 59.617 37.037 0.00 0.00 0.00 2.82
908 1371 5.634118 ACTTTCTCCTTCCAATCATTGTCA 58.366 37.500 0.00 0.00 0.00 3.58
913 1376 6.962182 TCTCCTTCCAATCATTGTCACTTAT 58.038 36.000 0.00 0.00 0.00 1.73
947 1410 0.532862 AGCACCTCGAAACACCACTG 60.533 55.000 0.00 0.00 0.00 3.66
966 1429 1.129326 GAAATATCCGTGGACGCGAG 58.871 55.000 15.93 0.00 38.18 5.03
969 1432 1.516365 ATATCCGTGGACGCGAGGAG 61.516 60.000 15.93 0.00 36.08 3.69
970 1433 2.881539 TATCCGTGGACGCGAGGAGT 62.882 60.000 15.93 6.37 36.08 3.85
971 1434 2.881539 ATCCGTGGACGCGAGGAGTA 62.882 60.000 15.93 0.00 36.08 2.59
1126 1596 1.001406 CTAGCACCCATAGCAGTAGCC 59.999 57.143 0.00 0.00 43.56 3.93
1179 1649 2.760385 ACCAGTAGCCTCCGAGCC 60.760 66.667 0.00 0.00 0.00 4.70
1390 1860 1.375013 TGGCTTAACGGAGGTTCGC 60.375 57.895 0.00 0.00 37.58 4.70
1482 1952 8.641541 AGTGTCAAAAATGATCTTACATTTGGT 58.358 29.630 0.00 0.00 45.71 3.67
1484 1954 9.906660 TGTCAAAAATGATCTTACATTTGGTAC 57.093 29.630 0.00 0.00 45.71 3.34
1583 2082 0.957395 CCCTCAGCACAAACGAGCAT 60.957 55.000 0.00 0.00 0.00 3.79
1606 2105 0.688487 TGGAACAACGGTTAGGGAGG 59.312 55.000 0.00 0.00 37.36 4.30
1719 2222 4.514577 CTCGAATCGCCTGCCGGT 62.515 66.667 1.90 0.00 37.59 5.28
1860 2363 1.693627 GCTCCTTCTACATCTCCGGA 58.306 55.000 2.93 2.93 0.00 5.14
1962 2465 1.202203 TGGTACGCGCGATTATGTTC 58.798 50.000 39.36 10.58 0.00 3.18
1969 2472 3.000078 ACGCGCGATTATGTTCAGTTAAG 60.000 43.478 39.36 0.00 0.00 1.85
1996 2499 9.973246 CATACACTTCATAACAGTTAACACATC 57.027 33.333 8.61 0.00 0.00 3.06
2010 2517 8.037758 CAGTTAACACATCTCCTAGTGAAGATT 58.962 37.037 8.61 0.00 39.03 2.40
2047 2554 5.091552 TGTGGATCTCTACTTGGTTAGGTT 58.908 41.667 0.00 0.00 0.00 3.50
2089 2596 2.358322 ACATGAACACGAAAGGGGTT 57.642 45.000 0.00 0.00 26.69 4.11
2151 2658 2.147958 GTACGCCAACATCACCAAGAA 58.852 47.619 0.00 0.00 0.00 2.52
2176 2683 3.129287 GCAATTTCAATCTGTCGGATGGT 59.871 43.478 0.00 0.00 34.45 3.55
2178 2685 5.163663 GCAATTTCAATCTGTCGGATGGTAA 60.164 40.000 0.00 0.00 34.45 2.85
2302 2813 5.509840 CCCCAGCCGCTATGTAAGATATATC 60.510 48.000 4.42 4.42 0.00 1.63
2360 2875 2.353579 GCACGTAACACACTTCCTTTGT 59.646 45.455 0.00 0.00 0.00 2.83
2389 2904 9.539194 ACCTAATTTCTGAAGAAAAATCATCCT 57.461 29.630 9.42 0.00 45.81 3.24
2801 3316 2.107041 ATTTCGACTCCGTGTGCCCA 62.107 55.000 0.00 0.00 37.05 5.36
2813 3328 1.974343 GTGCCCATTTACCGCCACA 60.974 57.895 0.00 0.00 0.00 4.17
2939 3458 6.597672 TCACTTGTTTGTTTGTACTGACTGAT 59.402 34.615 0.00 0.00 0.00 2.90
2940 3459 6.688385 CACTTGTTTGTTTGTACTGACTGATG 59.312 38.462 0.00 0.00 0.00 3.07
2941 3460 6.597672 ACTTGTTTGTTTGTACTGACTGATGA 59.402 34.615 0.00 0.00 0.00 2.92
2942 3461 6.358118 TGTTTGTTTGTACTGACTGATGAC 57.642 37.500 0.00 0.00 0.00 3.06
2943 3462 5.877564 TGTTTGTTTGTACTGACTGATGACA 59.122 36.000 0.00 0.00 0.00 3.58
2944 3463 5.984233 TTGTTTGTACTGACTGATGACAC 57.016 39.130 0.00 0.00 0.00 3.67
2946 3465 5.049828 TGTTTGTACTGACTGATGACACTG 58.950 41.667 0.00 0.00 0.00 3.66
2949 3468 5.529581 TGTACTGACTGATGACACTGAAA 57.470 39.130 0.00 0.00 0.00 2.69
2950 3469 6.101650 TGTACTGACTGATGACACTGAAAT 57.898 37.500 0.00 0.00 0.00 2.17
2951 3470 6.524734 TGTACTGACTGATGACACTGAAATT 58.475 36.000 0.00 0.00 0.00 1.82
2952 3471 6.992123 TGTACTGACTGATGACACTGAAATTT 59.008 34.615 0.00 0.00 0.00 1.82
2971 3490 2.990740 TTTTGCAGGTTGGAGGGTAT 57.009 45.000 0.00 0.00 0.00 2.73
2975 3494 1.004277 TGCAGGTTGGAGGGTATGTTC 59.996 52.381 0.00 0.00 0.00 3.18
3126 3646 1.907255 GGGGCAGTAGTATATGGACCC 59.093 57.143 0.00 0.00 37.59 4.46
3136 3656 8.142551 CAGTAGTATATGGACCCAAGTAAGAAC 58.857 40.741 0.00 0.00 0.00 3.01
3140 3660 3.764237 TGGACCCAAGTAAGAACTGTC 57.236 47.619 0.00 0.00 35.62 3.51
3172 3694 4.150897 TCCAGATATGGTGTTGCCTTAC 57.849 45.455 6.21 0.00 38.35 2.34
3173 3695 3.780294 TCCAGATATGGTGTTGCCTTACT 59.220 43.478 6.21 0.00 38.35 2.24
3174 3696 4.227300 TCCAGATATGGTGTTGCCTTACTT 59.773 41.667 6.21 0.00 38.35 2.24
3215 3738 4.279169 TGTCTTTTGCCTCTTCAAATGGAG 59.721 41.667 0.00 0.00 36.04 3.86
3217 3740 5.184671 GTCTTTTGCCTCTTCAAATGGAGAT 59.815 40.000 0.00 0.00 36.04 2.75
3230 3753 2.723322 TGGAGATGGGCTCTTGAATG 57.277 50.000 0.00 0.00 43.43 2.67
3233 3756 3.718434 TGGAGATGGGCTCTTGAATGTAT 59.282 43.478 0.00 0.00 43.43 2.29
3234 3757 4.202398 TGGAGATGGGCTCTTGAATGTATC 60.202 45.833 0.00 0.00 43.43 2.24
3235 3758 4.322567 GAGATGGGCTCTTGAATGTATCC 58.677 47.826 0.00 0.00 40.61 2.59
3236 3759 3.979347 AGATGGGCTCTTGAATGTATCCT 59.021 43.478 0.00 0.00 0.00 3.24
3237 3760 4.414846 AGATGGGCTCTTGAATGTATCCTT 59.585 41.667 0.00 0.00 0.00 3.36
3238 3761 3.889815 TGGGCTCTTGAATGTATCCTTG 58.110 45.455 0.00 0.00 0.00 3.61
3239 3762 3.217626 GGGCTCTTGAATGTATCCTTGG 58.782 50.000 0.00 0.00 0.00 3.61
3241 3764 3.629398 GGCTCTTGAATGTATCCTTGGTG 59.371 47.826 0.00 0.00 0.00 4.17
3243 3766 4.702131 GCTCTTGAATGTATCCTTGGTGTT 59.298 41.667 0.00 0.00 0.00 3.32
3246 3769 6.068010 TCTTGAATGTATCCTTGGTGTTTGT 58.932 36.000 0.00 0.00 0.00 2.83
3247 3770 6.549364 TCTTGAATGTATCCTTGGTGTTTGTT 59.451 34.615 0.00 0.00 0.00 2.83
3248 3771 6.723298 TGAATGTATCCTTGGTGTTTGTTT 57.277 33.333 0.00 0.00 0.00 2.83
3250 3773 6.549364 TGAATGTATCCTTGGTGTTTGTTTCT 59.451 34.615 0.00 0.00 0.00 2.52
3251 3774 6.575162 ATGTATCCTTGGTGTTTGTTTCTC 57.425 37.500 0.00 0.00 0.00 2.87
3252 3775 5.441500 TGTATCCTTGGTGTTTGTTTCTCA 58.558 37.500 0.00 0.00 0.00 3.27
3253 3776 5.888724 TGTATCCTTGGTGTTTGTTTCTCAA 59.111 36.000 0.00 0.00 0.00 3.02
3254 3777 6.549364 TGTATCCTTGGTGTTTGTTTCTCAAT 59.451 34.615 0.00 0.00 35.84 2.57
3256 3779 3.803778 CCTTGGTGTTTGTTTCTCAATGC 59.196 43.478 0.00 0.00 35.84 3.56
3257 3780 4.431809 CTTGGTGTTTGTTTCTCAATGCA 58.568 39.130 0.00 0.00 35.84 3.96
3258 3781 4.044336 TGGTGTTTGTTTCTCAATGCAG 57.956 40.909 0.00 0.00 35.84 4.41
3259 3782 3.698539 TGGTGTTTGTTTCTCAATGCAGA 59.301 39.130 0.00 0.00 35.84 4.26
3260 3783 4.159321 TGGTGTTTGTTTCTCAATGCAGAA 59.841 37.500 0.00 0.00 35.84 3.02
3261 3784 4.741676 GGTGTTTGTTTCTCAATGCAGAAG 59.258 41.667 0.00 0.00 33.85 2.85
3263 3786 6.211515 GTGTTTGTTTCTCAATGCAGAAGAT 58.788 36.000 0.00 0.00 33.85 2.40
3264 3787 6.698766 GTGTTTGTTTCTCAATGCAGAAGATT 59.301 34.615 0.00 0.00 33.85 2.40
3266 3789 8.579006 TGTTTGTTTCTCAATGCAGAAGATTAT 58.421 29.630 0.00 0.00 33.85 1.28
3270 3793 9.453572 TGTTTCTCAATGCAGAAGATTATAACT 57.546 29.630 0.00 0.00 33.85 2.24
3271 3794 9.713740 GTTTCTCAATGCAGAAGATTATAACTG 57.286 33.333 0.00 0.00 33.85 3.16
3272 3795 8.442632 TTCTCAATGCAGAAGATTATAACTGG 57.557 34.615 0.00 0.00 0.00 4.00
3274 3797 6.359804 TCAATGCAGAAGATTATAACTGGCT 58.640 36.000 0.00 0.00 0.00 4.75
3276 3799 5.102953 TGCAGAAGATTATAACTGGCTGT 57.897 39.130 0.00 0.00 0.00 4.40
3277 3800 5.500234 TGCAGAAGATTATAACTGGCTGTT 58.500 37.500 14.32 14.32 42.31 3.16
3279 3802 5.220931 GCAGAAGATTATAACTGGCTGTTGG 60.221 44.000 18.60 0.00 39.55 3.77
3280 3803 5.882557 CAGAAGATTATAACTGGCTGTTGGT 59.117 40.000 18.60 10.25 39.55 3.67
3281 3804 6.375455 CAGAAGATTATAACTGGCTGTTGGTT 59.625 38.462 18.60 7.10 39.55 3.67
3282 3805 7.552687 CAGAAGATTATAACTGGCTGTTGGTTA 59.447 37.037 18.60 6.25 39.55 2.85
3283 3806 7.770897 AGAAGATTATAACTGGCTGTTGGTTAG 59.229 37.037 18.60 0.00 39.55 2.34
3284 3807 6.357367 AGATTATAACTGGCTGTTGGTTAGG 58.643 40.000 18.60 0.00 39.55 2.69
3285 3808 5.508280 TTATAACTGGCTGTTGGTTAGGT 57.492 39.130 18.60 0.00 39.55 3.08
3286 3809 6.623979 TTATAACTGGCTGTTGGTTAGGTA 57.376 37.500 18.60 0.00 39.55 3.08
3287 3810 5.710409 ATAACTGGCTGTTGGTTAGGTAT 57.290 39.130 18.60 0.22 39.55 2.73
3288 3811 3.350219 ACTGGCTGTTGGTTAGGTATG 57.650 47.619 0.00 0.00 0.00 2.39
3289 3812 2.910319 ACTGGCTGTTGGTTAGGTATGA 59.090 45.455 0.00 0.00 0.00 2.15
3290 3813 3.055094 ACTGGCTGTTGGTTAGGTATGAG 60.055 47.826 0.00 0.00 0.00 2.90
3293 3816 4.227300 TGGCTGTTGGTTAGGTATGAGAAT 59.773 41.667 0.00 0.00 0.00 2.40
3294 3817 5.427157 TGGCTGTTGGTTAGGTATGAGAATA 59.573 40.000 0.00 0.00 0.00 1.75
3295 3818 5.992217 GGCTGTTGGTTAGGTATGAGAATAG 59.008 44.000 0.00 0.00 0.00 1.73
3296 3819 6.183360 GGCTGTTGGTTAGGTATGAGAATAGA 60.183 42.308 0.00 0.00 0.00 1.98
3297 3820 6.702282 GCTGTTGGTTAGGTATGAGAATAGAC 59.298 42.308 0.00 0.00 0.00 2.59
3298 3821 7.632898 GCTGTTGGTTAGGTATGAGAATAGACA 60.633 40.741 0.00 0.00 0.00 3.41
3299 3822 8.141298 TGTTGGTTAGGTATGAGAATAGACAA 57.859 34.615 0.00 0.00 0.00 3.18
3302 3825 8.141298 TGGTTAGGTATGAGAATAGACAACAA 57.859 34.615 0.00 0.00 0.00 2.83
3313 3836 7.389330 TGAGAATAGACAACAATTTTAAGCGGA 59.611 33.333 0.00 0.00 0.00 5.54
3314 3837 8.106247 AGAATAGACAACAATTTTAAGCGGAA 57.894 30.769 0.00 0.00 0.00 4.30
3341 3864 8.980481 AACATTATACCTCTCAACAATTAGGG 57.020 34.615 0.00 0.00 33.16 3.53
3343 3866 8.211629 ACATTATACCTCTCAACAATTAGGGAC 58.788 37.037 0.00 0.00 33.16 4.46
3367 3901 1.200020 CGGAAATGGCACTTCAACCTC 59.800 52.381 11.13 0.00 0.00 3.85
3379 3913 2.151502 TCAACCTCTGCACCCAAAAA 57.848 45.000 0.00 0.00 0.00 1.94
3385 3919 1.003476 CTGCACCCAAAAATGCCCC 60.003 57.895 0.00 0.00 41.33 5.80
3412 3946 6.284475 TGCAATTTGTTACAAAGTTGATGC 57.716 33.333 23.54 21.23 30.60 3.91
3421 3955 3.290710 ACAAAGTTGATGCAGGAGTTGT 58.709 40.909 0.00 0.00 0.00 3.32
3423 3957 1.242076 AGTTGATGCAGGAGTTGTGC 58.758 50.000 0.00 0.00 41.59 4.57
3425 3959 0.178995 TTGATGCAGGAGTTGTGCCA 60.179 50.000 0.00 0.00 40.43 4.92
3464 3998 8.514330 AACAACAAGTTACATAAAGTGAGGAA 57.486 30.769 0.00 0.00 39.09 3.36
3482 4016 7.831193 AGTGAGGAAAATTGAGCATTACATAGT 59.169 33.333 0.00 0.00 0.00 2.12
3509 4043 8.251383 TGTTATCAAACCTCCATTTAAACCAA 57.749 30.769 0.00 0.00 34.49 3.67
3529 4063 4.827284 CCAAAACTACAACATCCTGGTTCT 59.173 41.667 0.00 0.00 0.00 3.01
3552 4086 1.895131 CCTCTGGGGTTGTGGAATTTG 59.105 52.381 0.00 0.00 0.00 2.32
3558 4092 2.233676 GGGGTTGTGGAATTTGATGGTC 59.766 50.000 0.00 0.00 0.00 4.02
3572 4106 8.433421 AATTTGATGGTCGGTAAACTATACTG 57.567 34.615 0.00 0.00 0.00 2.74
3573 4107 6.534475 TTGATGGTCGGTAAACTATACTGT 57.466 37.500 0.00 0.00 0.00 3.55
3574 4108 7.643569 TTGATGGTCGGTAAACTATACTGTA 57.356 36.000 0.00 0.00 0.00 2.74
3575 4109 7.828508 TGATGGTCGGTAAACTATACTGTAT 57.171 36.000 5.53 5.53 0.00 2.29
3576 4110 8.241497 TGATGGTCGGTAAACTATACTGTATT 57.759 34.615 5.52 0.00 0.00 1.89
3577 4111 9.353431 TGATGGTCGGTAAACTATACTGTATTA 57.647 33.333 5.52 0.00 0.00 0.98
3609 4143 7.306866 GCAGTGAAGATGATTACGATTAGGAAC 60.307 40.741 0.00 0.00 0.00 3.62
3611 4145 6.916387 GTGAAGATGATTACGATTAGGAACGA 59.084 38.462 0.00 0.00 0.00 3.85
3622 4156 5.086058 CGATTAGGAACGACATGTTTTTGG 58.914 41.667 0.00 0.00 42.09 3.28
3626 4160 4.550395 CGACATGTTTTTGGCGGG 57.450 55.556 0.00 0.00 44.46 6.13
3630 4164 2.131972 GACATGTTTTTGGCGGGAAAC 58.868 47.619 0.00 4.00 36.53 2.78
3634 4168 3.651803 TGTTTTTGGCGGGAAACATAG 57.348 42.857 8.25 0.00 39.92 2.23
3642 4176 1.540267 CGGGAAACATAGGGTGCAAA 58.460 50.000 0.00 0.00 0.00 3.68
3643 4177 1.472480 CGGGAAACATAGGGTGCAAAG 59.528 52.381 0.00 0.00 0.00 2.77
3644 4178 1.824852 GGGAAACATAGGGTGCAAAGG 59.175 52.381 0.00 0.00 0.00 3.11
3645 4179 2.525368 GGAAACATAGGGTGCAAAGGT 58.475 47.619 0.00 0.00 0.00 3.50
3646 4180 2.897326 GGAAACATAGGGTGCAAAGGTT 59.103 45.455 0.00 0.00 0.00 3.50
3647 4181 3.306019 GGAAACATAGGGTGCAAAGGTTG 60.306 47.826 0.00 0.00 0.00 3.77
3648 4182 2.969821 ACATAGGGTGCAAAGGTTGA 57.030 45.000 0.00 0.00 0.00 3.18
3649 4183 3.237268 ACATAGGGTGCAAAGGTTGAA 57.763 42.857 0.00 0.00 0.00 2.69
3650 4184 3.778265 ACATAGGGTGCAAAGGTTGAAT 58.222 40.909 0.00 0.00 0.00 2.57
3651 4185 3.763897 ACATAGGGTGCAAAGGTTGAATC 59.236 43.478 0.00 0.00 0.00 2.52
3652 4186 2.380064 AGGGTGCAAAGGTTGAATCA 57.620 45.000 0.00 0.00 0.00 2.57
3653 4187 2.242043 AGGGTGCAAAGGTTGAATCAG 58.758 47.619 0.00 0.00 0.00 2.90
3654 4188 2.158475 AGGGTGCAAAGGTTGAATCAGA 60.158 45.455 0.00 0.00 0.00 3.27
3655 4189 2.029918 GGGTGCAAAGGTTGAATCAGAC 60.030 50.000 0.00 0.00 0.00 3.51
3656 4190 2.887152 GGTGCAAAGGTTGAATCAGACT 59.113 45.455 0.00 0.00 0.00 3.24
3657 4191 3.304928 GGTGCAAAGGTTGAATCAGACTG 60.305 47.826 0.00 0.00 0.00 3.51
3658 4192 2.294233 TGCAAAGGTTGAATCAGACTGC 59.706 45.455 0.00 0.00 0.00 4.40
3659 4193 2.294233 GCAAAGGTTGAATCAGACTGCA 59.706 45.455 0.00 0.00 0.00 4.41
3660 4194 3.057033 GCAAAGGTTGAATCAGACTGCAT 60.057 43.478 0.00 0.00 0.00 3.96
3661 4195 4.730657 CAAAGGTTGAATCAGACTGCATC 58.269 43.478 0.00 0.00 0.00 3.91
3662 4196 3.996921 AGGTTGAATCAGACTGCATCT 57.003 42.857 0.00 0.00 38.66 2.90
3663 4197 4.298103 AGGTTGAATCAGACTGCATCTT 57.702 40.909 0.00 0.00 34.41 2.40
3664 4198 4.660168 AGGTTGAATCAGACTGCATCTTT 58.340 39.130 0.00 0.00 34.41 2.52
3665 4199 4.458295 AGGTTGAATCAGACTGCATCTTTG 59.542 41.667 0.00 0.00 34.41 2.77
3666 4200 4.217118 GGTTGAATCAGACTGCATCTTTGT 59.783 41.667 0.00 0.00 34.41 2.83
3667 4201 5.412594 GGTTGAATCAGACTGCATCTTTGTA 59.587 40.000 0.00 0.00 34.41 2.41
3668 4202 6.402983 GGTTGAATCAGACTGCATCTTTGTAG 60.403 42.308 0.00 0.00 40.98 2.74
3677 4211 6.492007 ACTGCATCTTTGTAGTGAAATCAG 57.508 37.500 0.00 0.00 45.64 2.90
3678 4212 6.000219 ACTGCATCTTTGTAGTGAAATCAGT 59.000 36.000 0.00 0.00 45.64 3.41
3679 4213 6.072838 ACTGCATCTTTGTAGTGAAATCAGTG 60.073 38.462 0.98 0.00 45.64 3.66
3680 4214 5.091431 GCATCTTTGTAGTGAAATCAGTGC 58.909 41.667 0.98 0.48 33.33 4.40
3681 4215 5.335113 GCATCTTTGTAGTGAAATCAGTGCA 60.335 40.000 5.11 5.11 39.54 4.57
3682 4216 5.929697 TCTTTGTAGTGAAATCAGTGCAG 57.070 39.130 8.65 0.74 41.61 4.41
3683 4217 4.214119 TCTTTGTAGTGAAATCAGTGCAGC 59.786 41.667 8.65 0.00 41.61 5.25
3684 4218 2.068519 TGTAGTGAAATCAGTGCAGCG 58.931 47.619 5.11 0.00 37.06 5.18
3685 4219 2.288763 TGTAGTGAAATCAGTGCAGCGA 60.289 45.455 5.11 0.00 37.06 4.93
3686 4220 1.882912 AGTGAAATCAGTGCAGCGAA 58.117 45.000 0.00 0.00 0.00 4.70
3687 4221 1.532868 AGTGAAATCAGTGCAGCGAAC 59.467 47.619 0.00 0.00 0.00 3.95
3688 4222 1.264020 GTGAAATCAGTGCAGCGAACA 59.736 47.619 0.00 0.00 0.00 3.18
3689 4223 1.532437 TGAAATCAGTGCAGCGAACAG 59.468 47.619 0.00 0.00 0.00 3.16
3690 4224 1.800586 GAAATCAGTGCAGCGAACAGA 59.199 47.619 0.00 0.00 0.00 3.41
3691 4225 2.105006 AATCAGTGCAGCGAACAGAT 57.895 45.000 0.00 0.00 0.00 2.90
3692 4226 1.366679 ATCAGTGCAGCGAACAGATG 58.633 50.000 0.00 0.00 39.70 2.90
3693 4227 0.318120 TCAGTGCAGCGAACAGATGA 59.682 50.000 0.00 0.00 38.85 2.92
3694 4228 1.066645 TCAGTGCAGCGAACAGATGAT 60.067 47.619 0.00 0.00 38.85 2.45
3695 4229 2.166254 TCAGTGCAGCGAACAGATGATA 59.834 45.455 0.00 0.00 38.85 2.15
3696 4230 3.129109 CAGTGCAGCGAACAGATGATAT 58.871 45.455 0.00 0.00 38.85 1.63
3697 4231 3.183976 CAGTGCAGCGAACAGATGATATC 59.816 47.826 0.00 0.00 38.85 1.63
3698 4232 3.069300 AGTGCAGCGAACAGATGATATCT 59.931 43.478 3.98 0.00 38.85 1.98
3699 4233 3.428198 GTGCAGCGAACAGATGATATCTC 59.572 47.826 3.98 0.00 38.85 2.75
3700 4234 2.660715 GCAGCGAACAGATGATATCTCG 59.339 50.000 3.98 4.95 38.85 4.04
3701 4235 3.240884 CAGCGAACAGATGATATCTCGG 58.759 50.000 3.98 3.05 38.85 4.63
3702 4236 2.887783 AGCGAACAGATGATATCTCGGT 59.112 45.455 3.98 6.48 37.58 4.69
3703 4237 3.057876 AGCGAACAGATGATATCTCGGTC 60.058 47.826 3.98 3.99 37.58 4.79
3704 4238 3.827625 CGAACAGATGATATCTCGGTCC 58.172 50.000 3.98 0.00 37.58 4.46
3705 4239 3.668226 CGAACAGATGATATCTCGGTCCG 60.668 52.174 4.39 4.39 37.58 4.79
3706 4240 2.163509 ACAGATGATATCTCGGTCCGG 58.836 52.381 12.29 0.00 37.58 5.14
3707 4241 2.224793 ACAGATGATATCTCGGTCCGGA 60.225 50.000 12.29 0.00 37.58 5.14
3708 4242 3.020274 CAGATGATATCTCGGTCCGGAT 58.980 50.000 7.81 14.82 37.58 4.18
3709 4243 3.020274 AGATGATATCTCGGTCCGGATG 58.980 50.000 7.81 3.39 33.42 3.51
3710 4244 2.287977 TGATATCTCGGTCCGGATGT 57.712 50.000 7.81 15.11 0.00 3.06
3711 4245 1.886542 TGATATCTCGGTCCGGATGTG 59.113 52.381 7.81 4.83 0.00 3.21
3712 4246 1.202582 GATATCTCGGTCCGGATGTGG 59.797 57.143 7.81 0.00 0.00 4.17
3713 4247 1.461091 TATCTCGGTCCGGATGTGGC 61.461 60.000 7.81 0.00 0.00 5.01
3714 4248 3.770040 CTCGGTCCGGATGTGGCA 61.770 66.667 7.81 0.00 0.00 4.92
3715 4249 3.309436 CTCGGTCCGGATGTGGCAA 62.309 63.158 7.81 0.00 0.00 4.52
3716 4250 2.124736 CGGTCCGGATGTGGCAAT 60.125 61.111 7.81 0.00 0.00 3.56
3717 4251 2.180204 CGGTCCGGATGTGGCAATC 61.180 63.158 7.81 0.00 0.00 2.67
3718 4252 1.077787 GGTCCGGATGTGGCAATCA 60.078 57.895 7.81 0.00 0.00 2.57
3719 4253 0.466189 GGTCCGGATGTGGCAATCAT 60.466 55.000 7.81 1.84 0.00 2.45
3720 4254 0.947244 GTCCGGATGTGGCAATCATC 59.053 55.000 7.81 9.05 40.38 2.92
3721 4255 0.545646 TCCGGATGTGGCAATCATCA 59.454 50.000 16.91 0.00 42.16 3.07
3722 4256 1.064832 TCCGGATGTGGCAATCATCAA 60.065 47.619 16.91 2.90 42.16 2.57
3723 4257 1.335810 CCGGATGTGGCAATCATCAAG 59.664 52.381 16.91 11.15 42.16 3.02
3724 4258 2.291365 CGGATGTGGCAATCATCAAGA 58.709 47.619 16.91 0.00 42.16 3.02
3725 4259 2.684374 CGGATGTGGCAATCATCAAGAA 59.316 45.455 16.91 0.00 42.16 2.52
3726 4260 3.129113 CGGATGTGGCAATCATCAAGAAA 59.871 43.478 16.91 0.00 42.16 2.52
3727 4261 4.202080 CGGATGTGGCAATCATCAAGAAAT 60.202 41.667 16.91 0.00 42.16 2.17
3728 4262 5.667466 GGATGTGGCAATCATCAAGAAATT 58.333 37.500 16.91 0.00 42.16 1.82
3729 4263 5.522460 GGATGTGGCAATCATCAAGAAATTG 59.478 40.000 16.91 4.91 42.16 2.32
3730 4264 4.823157 TGTGGCAATCATCAAGAAATTGG 58.177 39.130 0.00 0.00 32.31 3.16
3732 4266 3.200483 GGCAATCATCAAGAAATTGGCC 58.800 45.455 17.07 0.00 45.23 5.36
3733 4267 3.369681 GGCAATCATCAAGAAATTGGCCA 60.370 43.478 0.00 0.00 45.23 5.36
3734 4268 4.448210 GCAATCATCAAGAAATTGGCCAT 58.552 39.130 6.09 0.00 32.31 4.40
3735 4269 4.879545 GCAATCATCAAGAAATTGGCCATT 59.120 37.500 6.09 0.00 32.31 3.16
3736 4270 5.220777 GCAATCATCAAGAAATTGGCCATTG 60.221 40.000 6.09 8.15 32.31 2.82
3737 4271 5.943349 ATCATCAAGAAATTGGCCATTGA 57.057 34.783 18.49 18.49 34.64 2.57
3738 4272 5.075858 TCATCAAGAAATTGGCCATTGAC 57.924 39.130 18.55 8.17 33.09 3.18
3739 4273 4.773674 TCATCAAGAAATTGGCCATTGACT 59.226 37.500 18.55 10.06 33.09 3.41
3740 4274 5.246656 TCATCAAGAAATTGGCCATTGACTT 59.753 36.000 18.55 14.53 33.09 3.01
3741 4275 5.549742 TCAAGAAATTGGCCATTGACTTT 57.450 34.783 6.09 1.66 0.00 2.66
3742 4276 5.299148 TCAAGAAATTGGCCATTGACTTTG 58.701 37.500 6.09 8.11 0.00 2.77
3743 4277 3.667360 AGAAATTGGCCATTGACTTTGC 58.333 40.909 6.09 0.00 0.00 3.68
3744 4278 2.083167 AATTGGCCATTGACTTTGCG 57.917 45.000 6.09 0.00 0.00 4.85
3745 4279 0.247185 ATTGGCCATTGACTTTGCGG 59.753 50.000 6.09 0.00 0.00 5.69
3746 4280 0.825425 TTGGCCATTGACTTTGCGGA 60.825 50.000 6.09 0.00 0.00 5.54
3747 4281 0.825425 TGGCCATTGACTTTGCGGAA 60.825 50.000 0.00 0.00 0.00 4.30
3748 4282 0.109132 GGCCATTGACTTTGCGGAAG 60.109 55.000 0.00 0.00 41.32 3.46
3758 4292 4.138487 ACTTTGCGGAAGTATCTTAGGG 57.862 45.455 3.69 0.00 46.61 3.53
3759 4293 2.614829 TTGCGGAAGTATCTTAGGGC 57.385 50.000 0.00 0.00 0.00 5.19
3760 4294 0.387929 TGCGGAAGTATCTTAGGGCG 59.612 55.000 0.00 0.00 0.00 6.13
3761 4295 0.319641 GCGGAAGTATCTTAGGGCGG 60.320 60.000 0.00 0.00 0.00 6.13
3762 4296 0.319641 CGGAAGTATCTTAGGGCGGC 60.320 60.000 0.00 0.00 0.00 6.53
3763 4297 0.756903 GGAAGTATCTTAGGGCGGCA 59.243 55.000 12.47 0.00 0.00 5.69
3764 4298 1.348036 GGAAGTATCTTAGGGCGGCAT 59.652 52.381 12.47 6.26 0.00 4.40
3765 4299 2.613223 GGAAGTATCTTAGGGCGGCATC 60.613 54.545 12.47 0.00 0.00 3.91
3766 4300 2.016905 AGTATCTTAGGGCGGCATCT 57.983 50.000 12.47 1.51 0.00 2.90
3767 4301 2.330216 AGTATCTTAGGGCGGCATCTT 58.670 47.619 12.47 0.00 0.00 2.40
3768 4302 2.300437 AGTATCTTAGGGCGGCATCTTC 59.700 50.000 12.47 0.00 0.00 2.87
3769 4303 1.131638 ATCTTAGGGCGGCATCTTCA 58.868 50.000 12.47 0.00 0.00 3.02
3770 4304 0.908910 TCTTAGGGCGGCATCTTCAA 59.091 50.000 12.47 0.00 0.00 2.69
3771 4305 1.017387 CTTAGGGCGGCATCTTCAAC 58.983 55.000 12.47 0.00 0.00 3.18
3772 4306 0.742990 TTAGGGCGGCATCTTCAACG 60.743 55.000 12.47 0.00 0.00 4.10
3777 4311 3.813596 GGCATCTTCAACGCCGAT 58.186 55.556 0.00 0.00 35.79 4.18
3778 4312 1.643832 GGCATCTTCAACGCCGATC 59.356 57.895 0.00 0.00 35.79 3.69
3779 4313 1.643832 GCATCTTCAACGCCGATCC 59.356 57.895 0.00 0.00 0.00 3.36
3780 4314 0.811616 GCATCTTCAACGCCGATCCT 60.812 55.000 0.00 0.00 0.00 3.24
3781 4315 1.212616 CATCTTCAACGCCGATCCTC 58.787 55.000 0.00 0.00 0.00 3.71
3782 4316 0.824109 ATCTTCAACGCCGATCCTCA 59.176 50.000 0.00 0.00 0.00 3.86
3783 4317 0.606096 TCTTCAACGCCGATCCTCAA 59.394 50.000 0.00 0.00 0.00 3.02
3784 4318 1.001520 TCTTCAACGCCGATCCTCAAA 59.998 47.619 0.00 0.00 0.00 2.69
3785 4319 1.128692 CTTCAACGCCGATCCTCAAAC 59.871 52.381 0.00 0.00 0.00 2.93
3786 4320 0.672401 TCAACGCCGATCCTCAAACC 60.672 55.000 0.00 0.00 0.00 3.27
3787 4321 1.740296 AACGCCGATCCTCAAACCG 60.740 57.895 0.00 0.00 0.00 4.44
3788 4322 2.125673 CGCCGATCCTCAAACCGT 60.126 61.111 0.00 0.00 0.00 4.83
3789 4323 2.165301 CGCCGATCCTCAAACCGTC 61.165 63.158 0.00 0.00 0.00 4.79
3790 4324 1.814169 GCCGATCCTCAAACCGTCC 60.814 63.158 0.00 0.00 0.00 4.79
3791 4325 1.518572 CCGATCCTCAAACCGTCCG 60.519 63.158 0.00 0.00 0.00 4.79
3792 4326 1.518572 CGATCCTCAAACCGTCCGG 60.519 63.158 3.76 3.76 42.03 5.14
3793 4327 1.895238 GATCCTCAAACCGTCCGGA 59.105 57.895 13.54 0.00 38.96 5.14
3794 4328 0.459759 GATCCTCAAACCGTCCGGAC 60.460 60.000 25.28 25.28 38.96 4.79
3795 4329 1.896122 ATCCTCAAACCGTCCGGACC 61.896 60.000 28.52 11.28 38.96 4.46
3796 4330 2.738480 CTCAAACCGTCCGGACCA 59.262 61.111 28.52 5.05 38.96 4.02
3797 4331 1.666872 CTCAAACCGTCCGGACCAC 60.667 63.158 28.52 5.23 38.96 4.16
3798 4332 3.039588 CAAACCGTCCGGACCACG 61.040 66.667 28.52 17.76 43.80 4.94
3799 4333 3.539791 AAACCGTCCGGACCACGT 61.540 61.111 28.52 18.56 42.24 4.49
3800 4334 3.795499 AAACCGTCCGGACCACGTG 62.795 63.158 28.52 13.93 42.24 4.49
3814 4348 3.033764 CGTGGTCCGGACGTGTTG 61.034 66.667 27.68 11.97 32.06 3.33
3815 4349 2.107546 GTGGTCCGGACGTGTTGT 59.892 61.111 27.68 0.00 0.00 3.32
3816 4350 2.107343 TGGTCCGGACGTGTTGTG 59.893 61.111 27.68 0.00 0.00 3.33
3817 4351 3.343421 GGTCCGGACGTGTTGTGC 61.343 66.667 27.68 7.98 35.21 4.57
3818 4352 3.343421 GTCCGGACGTGTTGTGCC 61.343 66.667 20.85 0.00 35.07 5.01
3819 4353 3.851128 TCCGGACGTGTTGTGCCA 61.851 61.111 0.00 0.00 35.07 4.92
3820 4354 2.668212 CCGGACGTGTTGTGCCAT 60.668 61.111 0.00 0.00 35.07 4.40
3821 4355 2.677003 CCGGACGTGTTGTGCCATC 61.677 63.158 0.00 0.00 35.07 3.51
3822 4356 2.677003 CGGACGTGTTGTGCCATCC 61.677 63.158 0.00 0.00 35.07 3.51
3823 4357 2.677003 GGACGTGTTGTGCCATCCG 61.677 63.158 0.00 0.00 31.75 4.18
3824 4358 1.666553 GACGTGTTGTGCCATCCGA 60.667 57.895 0.00 0.00 0.00 4.55
3825 4359 1.003839 ACGTGTTGTGCCATCCGAT 60.004 52.632 0.00 0.00 0.00 4.18
3826 4360 1.298157 ACGTGTTGTGCCATCCGATG 61.298 55.000 0.93 0.93 0.00 3.84
3827 4361 1.137404 GTGTTGTGCCATCCGATGC 59.863 57.895 2.53 0.00 0.00 3.91
3828 4362 2.397754 TGTTGTGCCATCCGATGCG 61.398 57.895 2.53 0.00 0.00 4.73
3838 4372 4.835927 CCGATGCGGGCCTATATC 57.164 61.111 0.84 3.11 44.15 1.63
3839 4373 1.226974 CCGATGCGGGCCTATATCG 60.227 63.158 21.14 21.14 44.15 2.92
3840 4374 1.226974 CGATGCGGGCCTATATCGG 60.227 63.158 20.66 8.57 38.87 4.18
3841 4375 1.898154 GATGCGGGCCTATATCGGT 59.102 57.895 0.84 0.00 0.00 4.69
3842 4376 0.179108 GATGCGGGCCTATATCGGTC 60.179 60.000 0.84 0.00 0.00 4.79
3843 4377 1.614241 ATGCGGGCCTATATCGGTCC 61.614 60.000 6.85 6.85 45.64 4.46
3845 4379 2.577593 GGGCCTATATCGGTCCGC 59.422 66.667 6.34 0.00 39.41 5.54
3846 4380 1.982938 GGGCCTATATCGGTCCGCT 60.983 63.158 6.34 0.00 39.41 5.52
3847 4381 1.215647 GGCCTATATCGGTCCGCTG 59.784 63.158 6.34 0.00 0.00 5.18
3848 4382 1.248785 GGCCTATATCGGTCCGCTGA 61.249 60.000 6.34 0.00 0.00 4.26
3849 4383 0.171455 GCCTATATCGGTCCGCTGAG 59.829 60.000 6.34 0.93 32.83 3.35
3850 4384 0.171455 CCTATATCGGTCCGCTGAGC 59.829 60.000 6.34 0.00 32.83 4.26
3861 4395 3.890674 GCTGAGCGGTTCGGAAAT 58.109 55.556 4.73 0.00 33.75 2.17
3862 4396 1.425428 GCTGAGCGGTTCGGAAATG 59.575 57.895 4.73 0.00 33.75 2.32
3863 4397 1.425428 CTGAGCGGTTCGGAAATGC 59.575 57.895 7.22 7.22 33.75 3.56
3864 4398 1.003839 TGAGCGGTTCGGAAATGCT 60.004 52.632 15.35 15.35 38.89 3.79
3865 4399 0.605319 TGAGCGGTTCGGAAATGCTT 60.605 50.000 16.20 4.15 35.73 3.91
3866 4400 0.521735 GAGCGGTTCGGAAATGCTTT 59.478 50.000 16.20 0.00 35.73 3.51
3867 4401 0.521735 AGCGGTTCGGAAATGCTTTC 59.478 50.000 11.03 0.00 38.94 2.62
3868 4402 0.521735 GCGGTTCGGAAATGCTTTCT 59.478 50.000 7.88 0.00 39.59 2.52
3869 4403 1.465856 GCGGTTCGGAAATGCTTTCTC 60.466 52.381 7.88 0.00 39.59 2.87
3870 4404 1.130561 CGGTTCGGAAATGCTTTCTCC 59.869 52.381 0.00 6.21 39.59 3.71
3871 4405 1.472878 GGTTCGGAAATGCTTTCTCCC 59.527 52.381 0.00 0.47 39.59 4.30
3872 4406 1.130561 GTTCGGAAATGCTTTCTCCCG 59.869 52.381 11.80 11.80 39.59 5.14
3873 4407 1.024579 TCGGAAATGCTTTCTCCCGC 61.025 55.000 12.68 0.00 39.59 6.13
3874 4408 1.305219 CGGAAATGCTTTCTCCCGCA 61.305 55.000 8.05 0.00 39.59 5.69
3875 4409 0.887933 GGAAATGCTTTCTCCCGCAA 59.112 50.000 8.05 0.00 39.89 4.85
3876 4410 1.272212 GGAAATGCTTTCTCCCGCAAA 59.728 47.619 8.05 0.00 39.89 3.68
3877 4411 2.599659 GAAATGCTTTCTCCCGCAAAG 58.400 47.619 0.00 0.00 39.89 2.77
3878 4412 1.620822 AATGCTTTCTCCCGCAAAGT 58.379 45.000 0.00 0.00 39.89 2.66
3879 4413 0.883833 ATGCTTTCTCCCGCAAAGTG 59.116 50.000 0.00 0.00 39.89 3.16
3880 4414 1.172180 TGCTTTCTCCCGCAAAGTGG 61.172 55.000 0.00 0.00 33.96 4.00
3881 4415 0.889186 GCTTTCTCCCGCAAAGTGGA 60.889 55.000 0.00 0.00 34.74 4.02
3885 4419 3.557220 TCCCGCAAAGTGGAGACA 58.443 55.556 0.00 0.00 34.74 3.41
3886 4420 1.833606 TCCCGCAAAGTGGAGACAA 59.166 52.632 0.00 0.00 46.06 3.18
3887 4421 0.181587 TCCCGCAAAGTGGAGACAAA 59.818 50.000 0.00 0.00 46.06 2.83
3888 4422 0.593128 CCCGCAAAGTGGAGACAAAG 59.407 55.000 0.00 0.00 46.06 2.77
3889 4423 1.308998 CCGCAAAGTGGAGACAAAGT 58.691 50.000 0.00 0.00 46.06 2.66
3890 4424 2.489971 CCGCAAAGTGGAGACAAAGTA 58.510 47.619 0.00 0.00 46.06 2.24
3891 4425 2.480419 CCGCAAAGTGGAGACAAAGTAG 59.520 50.000 0.00 0.00 46.06 2.57
3892 4426 2.480419 CGCAAAGTGGAGACAAAGTAGG 59.520 50.000 0.00 0.00 46.06 3.18
3893 4427 2.814336 GCAAAGTGGAGACAAAGTAGGG 59.186 50.000 0.00 0.00 46.06 3.53
3894 4428 3.496160 GCAAAGTGGAGACAAAGTAGGGA 60.496 47.826 0.00 0.00 46.06 4.20
3895 4429 4.319177 CAAAGTGGAGACAAAGTAGGGAG 58.681 47.826 0.00 0.00 46.06 4.30
3896 4430 2.541466 AGTGGAGACAAAGTAGGGAGG 58.459 52.381 0.00 0.00 46.06 4.30
3897 4431 1.555533 GTGGAGACAAAGTAGGGAGGG 59.444 57.143 0.00 0.00 46.06 4.30
3898 4432 1.435563 TGGAGACAAAGTAGGGAGGGA 59.564 52.381 0.00 0.00 37.44 4.20
3899 4433 2.158066 TGGAGACAAAGTAGGGAGGGAA 60.158 50.000 0.00 0.00 37.44 3.97
3905 4439 1.900545 AAGTAGGGAGGGAAGTGCGC 61.901 60.000 0.00 0.00 0.00 6.09
3912 4446 1.084289 GAGGGAAGTGCGCGTTAATT 58.916 50.000 8.43 2.51 34.07 1.40
3918 4452 0.239879 AGTGCGCGTTAATTTGGGTG 59.760 50.000 8.43 0.00 0.00 4.61
3937 4471 0.933047 GCGTTCCGTGTTTCTTTGGC 60.933 55.000 0.00 0.00 0.00 4.52
3958 4492 1.068610 CGGTCGATGGTTTGCATGTTT 60.069 47.619 0.00 0.00 0.00 2.83
3959 4493 2.606795 CGGTCGATGGTTTGCATGTTTT 60.607 45.455 0.00 0.00 0.00 2.43
3962 4496 4.083003 GGTCGATGGTTTGCATGTTTTCTA 60.083 41.667 0.00 0.00 0.00 2.10
3992 4526 2.668550 GTCCACCGTTGGCTCCAC 60.669 66.667 0.00 0.00 43.56 4.02
4010 4544 3.785887 TCCACCCTGTTGCCTCTTATATT 59.214 43.478 0.00 0.00 0.00 1.28
4012 4546 3.809832 CACCCTGTTGCCTCTTATATTCG 59.190 47.826 0.00 0.00 0.00 3.34
4014 4548 4.058817 CCCTGTTGCCTCTTATATTCGTC 58.941 47.826 0.00 0.00 0.00 4.20
4044 4578 1.226323 CGATGAGGTCGTGTCGGTC 60.226 63.158 0.00 0.00 45.19 4.79
4059 4593 0.538516 CGGTCCATTGGTTGGTGGAA 60.539 55.000 1.86 0.00 45.50 3.53
4061 4595 1.824852 GGTCCATTGGTTGGTGGAATC 59.175 52.381 1.86 0.00 45.50 2.52
4075 4609 2.799540 GAATCGCAACGGTCGCTCC 61.800 63.158 0.00 0.00 0.00 4.70
4100 4634 1.434622 GCATCAGGACCATCAGTGCG 61.435 60.000 0.00 0.00 42.70 5.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.106648 AGATCCAATATTCGAATCAGAGCA 57.893 37.500 15.25 0.00 0.00 4.26
1 2 9.809096 TTATAGATCCAATATTCGAATCAGAGC 57.191 33.333 15.25 9.91 0.00 4.09
15 16 8.798859 AGCAGCGATTTATTTATAGATCCAAT 57.201 30.769 0.00 0.00 0.00 3.16
16 17 8.621532 AAGCAGCGATTTATTTATAGATCCAA 57.378 30.769 0.00 0.00 0.00 3.53
44 46 2.376956 CTGTACTTCTCATAGTCGCGC 58.623 52.381 0.00 0.00 0.00 6.86
46 48 3.377485 TCACCTGTACTTCTCATAGTCGC 59.623 47.826 0.00 0.00 0.00 5.19
47 49 4.395231 TGTCACCTGTACTTCTCATAGTCG 59.605 45.833 0.00 0.00 0.00 4.18
56 58 6.313905 CCTGAATATGTTGTCACCTGTACTTC 59.686 42.308 0.00 0.00 0.00 3.01
57 59 6.173339 CCTGAATATGTTGTCACCTGTACTT 58.827 40.000 0.00 0.00 0.00 2.24
58 60 5.734720 CCTGAATATGTTGTCACCTGTACT 58.265 41.667 0.00 0.00 0.00 2.73
60 62 4.513442 GCCTGAATATGTTGTCACCTGTA 58.487 43.478 0.00 0.00 0.00 2.74
61 63 3.347216 GCCTGAATATGTTGTCACCTGT 58.653 45.455 0.00 0.00 0.00 4.00
62 64 2.684881 GGCCTGAATATGTTGTCACCTG 59.315 50.000 0.00 0.00 0.00 4.00
64 66 2.722094 TGGCCTGAATATGTTGTCACC 58.278 47.619 3.32 0.00 0.00 4.02
65 67 5.126067 ACTATGGCCTGAATATGTTGTCAC 58.874 41.667 3.32 0.00 0.00 3.67
66 68 5.368145 GACTATGGCCTGAATATGTTGTCA 58.632 41.667 3.32 0.00 0.00 3.58
67 69 4.449068 CGACTATGGCCTGAATATGTTGTC 59.551 45.833 3.32 0.00 0.00 3.18
68 70 4.141711 ACGACTATGGCCTGAATATGTTGT 60.142 41.667 3.32 0.77 0.00 3.32
69 71 4.380531 ACGACTATGGCCTGAATATGTTG 58.619 43.478 3.32 0.15 0.00 3.33
70 72 4.689612 ACGACTATGGCCTGAATATGTT 57.310 40.909 3.32 0.00 0.00 2.71
71 73 5.337571 CCATACGACTATGGCCTGAATATGT 60.338 44.000 3.32 0.00 42.50 2.29
72 74 5.111989 CCATACGACTATGGCCTGAATATG 58.888 45.833 3.32 3.39 42.50 1.78
128 130 7.679783 TCACTCTATCCTTTTCATGAGAACAA 58.320 34.615 0.00 0.00 32.39 2.83
134 136 7.712639 GTGCTATTCACTCTATCCTTTTCATGA 59.287 37.037 0.00 0.00 42.38 3.07
144 146 6.095432 ACCAGATGTGCTATTCACTCTATC 57.905 41.667 0.00 0.00 45.81 2.08
178 180 9.195411 GCTGTGATTAAAATTCAAAGATGTTCA 57.805 29.630 0.00 0.00 0.00 3.18
191 193 6.024552 ACGGAAACATGCTGTGATTAAAAT 57.975 33.333 0.00 0.00 0.00 1.82
196 198 6.767902 AGATATTACGGAAACATGCTGTGATT 59.232 34.615 0.00 0.00 0.00 2.57
201 203 6.037062 TCACAAGATATTACGGAAACATGCTG 59.963 38.462 0.00 0.00 0.00 4.41
203 205 6.358118 TCACAAGATATTACGGAAACATGC 57.642 37.500 0.00 0.00 0.00 4.06
204 206 8.064222 GTGATCACAAGATATTACGGAAACATG 58.936 37.037 21.07 0.00 33.72 3.21
205 207 7.042725 CGTGATCACAAGATATTACGGAAACAT 60.043 37.037 24.93 0.00 34.90 2.71
207 209 6.474427 TCGTGATCACAAGATATTACGGAAAC 59.526 38.462 24.93 0.00 37.07 2.78
211 213 4.383052 GCTCGTGATCACAAGATATTACGG 59.617 45.833 24.93 4.79 37.07 4.02
214 216 6.391227 TCTGCTCGTGATCACAAGATATTA 57.609 37.500 24.93 1.11 34.46 0.98
216 218 4.926140 TCTGCTCGTGATCACAAGATAT 57.074 40.909 24.93 0.00 34.46 1.63
217 219 4.718940 TTCTGCTCGTGATCACAAGATA 57.281 40.909 24.93 8.57 34.46 1.98
218 220 3.599730 TTCTGCTCGTGATCACAAGAT 57.400 42.857 24.93 0.00 34.46 2.40
219 221 3.056607 TCATTCTGCTCGTGATCACAAGA 60.057 43.478 24.93 17.34 33.90 3.02
220 222 3.256558 TCATTCTGCTCGTGATCACAAG 58.743 45.455 24.93 17.75 0.00 3.16
221 223 3.317603 TCATTCTGCTCGTGATCACAA 57.682 42.857 24.93 11.15 0.00 3.33
222 224 3.317603 TTCATTCTGCTCGTGATCACA 57.682 42.857 24.93 11.49 0.00 3.58
223 225 3.484886 GCTTTCATTCTGCTCGTGATCAC 60.485 47.826 16.21 16.21 0.00 3.06
224 226 2.674852 GCTTTCATTCTGCTCGTGATCA 59.325 45.455 0.00 0.00 0.00 2.92
225 227 2.674852 TGCTTTCATTCTGCTCGTGATC 59.325 45.455 0.00 0.00 0.00 2.92
226 228 2.703416 TGCTTTCATTCTGCTCGTGAT 58.297 42.857 0.00 0.00 0.00 3.06
227 229 2.168326 TGCTTTCATTCTGCTCGTGA 57.832 45.000 0.00 0.00 0.00 4.35
228 230 2.413765 CCTTGCTTTCATTCTGCTCGTG 60.414 50.000 0.00 0.00 0.00 4.35
244 246 1.742268 GTCCTGAGAGAATTGCCTTGC 59.258 52.381 0.00 0.00 0.00 4.01
258 260 5.150715 AGATATTCCTACATGCAGTCCTGA 58.849 41.667 0.00 0.00 0.00 3.86
259 261 5.477510 GAGATATTCCTACATGCAGTCCTG 58.522 45.833 0.00 0.00 0.00 3.86
278 280 8.162085 ACTAGCATATGATGAACATTTGGAGAT 58.838 33.333 6.97 0.00 40.07 2.75
279 281 7.512130 ACTAGCATATGATGAACATTTGGAGA 58.488 34.615 6.97 0.00 40.07 3.71
280 282 7.741027 ACTAGCATATGATGAACATTTGGAG 57.259 36.000 6.97 0.00 40.07 3.86
336 582 7.967908 ACCCATGTCCTTGTATCTTTATAGAG 58.032 38.462 0.00 0.00 32.92 2.43
426 679 9.306280 CTATCGAATAATTAGCAACACAAATCG 57.694 33.333 0.00 0.00 0.00 3.34
460 713 5.357257 ACGATGATCACATAGTTACAACCC 58.643 41.667 0.00 0.00 38.76 4.11
462 715 7.488150 TGAGAACGATGATCACATAGTTACAAC 59.512 37.037 0.00 0.00 46.53 3.32
514 767 4.301072 TGGGAGGATGAGAACGATTTTT 57.699 40.909 0.00 0.00 0.00 1.94
515 768 4.080356 TGATGGGAGGATGAGAACGATTTT 60.080 41.667 0.00 0.00 0.00 1.82
516 769 3.455910 TGATGGGAGGATGAGAACGATTT 59.544 43.478 0.00 0.00 0.00 2.17
517 770 3.041211 TGATGGGAGGATGAGAACGATT 58.959 45.455 0.00 0.00 0.00 3.34
518 771 2.682594 TGATGGGAGGATGAGAACGAT 58.317 47.619 0.00 0.00 0.00 3.73
519 772 2.159179 TGATGGGAGGATGAGAACGA 57.841 50.000 0.00 0.00 0.00 3.85
520 773 2.988010 TTGATGGGAGGATGAGAACG 57.012 50.000 0.00 0.00 0.00 3.95
521 774 4.593956 ACTTTTGATGGGAGGATGAGAAC 58.406 43.478 0.00 0.00 0.00 3.01
522 775 4.934797 ACTTTTGATGGGAGGATGAGAA 57.065 40.909 0.00 0.00 0.00 2.87
523 776 4.934797 AACTTTTGATGGGAGGATGAGA 57.065 40.909 0.00 0.00 0.00 3.27
524 777 5.104360 TCCTAACTTTTGATGGGAGGATGAG 60.104 44.000 0.00 0.00 0.00 2.90
525 778 4.788075 TCCTAACTTTTGATGGGAGGATGA 59.212 41.667 0.00 0.00 0.00 2.92
526 779 4.884164 GTCCTAACTTTTGATGGGAGGATG 59.116 45.833 0.00 0.00 34.29 3.51
527 780 4.790790 AGTCCTAACTTTTGATGGGAGGAT 59.209 41.667 0.00 0.00 34.29 3.24
528 781 4.175962 AGTCCTAACTTTTGATGGGAGGA 58.824 43.478 0.00 0.00 28.74 3.71
529 782 4.576330 AGTCCTAACTTTTGATGGGAGG 57.424 45.455 0.00 0.00 28.74 4.30
530 783 6.301169 ACTAGTCCTAACTTTTGATGGGAG 57.699 41.667 0.00 0.00 36.92 4.30
531 784 5.189145 GGACTAGTCCTAACTTTTGATGGGA 59.811 44.000 31.12 0.00 46.16 4.37
532 785 5.429130 GGACTAGTCCTAACTTTTGATGGG 58.571 45.833 31.12 0.00 46.16 4.00
552 805 0.179108 CTGCCGTTGCTACTAGGGAC 60.179 60.000 0.00 0.00 38.71 4.46
572 825 2.483014 AGGTTACACTTTGGCGCATA 57.517 45.000 10.83 0.00 0.00 3.14
658 1089 2.421388 GCCCCTGTGCTGTATGATTGTA 60.421 50.000 0.00 0.00 0.00 2.41
716 1147 4.727235 ACTTTGTACGCAAGCTTAGAAC 57.273 40.909 0.00 0.00 45.62 3.01
736 1167 5.459107 CAGGCTGTATGTTGTCGAGTTATAC 59.541 44.000 6.28 0.00 0.00 1.47
744 1175 1.328680 GATGCAGGCTGTATGTTGTCG 59.671 52.381 23.08 0.00 0.00 4.35
785 1216 4.887071 AGAAAAACTACATGTCTGTTGCCA 59.113 37.500 15.06 0.00 36.79 4.92
787 1218 6.417930 GGAAAGAAAAACTACATGTCTGTTGC 59.582 38.462 15.06 9.58 36.79 4.17
788 1219 7.707104 AGGAAAGAAAAACTACATGTCTGTTG 58.293 34.615 15.06 0.95 36.79 3.33
789 1220 7.881775 AGGAAAGAAAAACTACATGTCTGTT 57.118 32.000 0.00 6.47 36.79 3.16
817 1258 4.340097 TCTGACCGTACTGAGACAAAAAGA 59.660 41.667 0.00 0.00 0.00 2.52
857 1320 2.995939 GCGATCAATCAGTCAGTGTTGA 59.004 45.455 0.00 3.26 33.52 3.18
867 1330 3.729526 AGTTTTGACGCGATCAATCAG 57.270 42.857 15.93 0.00 46.80 2.90
887 1350 5.634118 AGTGACAATGATTGGAAGGAGAAA 58.366 37.500 10.27 0.00 34.12 2.52
913 1376 8.640063 TTCGAGGTGCTTATATAGGTGTAATA 57.360 34.615 0.00 0.00 0.00 0.98
947 1410 1.129326 CTCGCGTCCACGGATATTTC 58.871 55.000 5.77 0.00 40.23 2.17
966 1429 5.643777 TGAAGAAAATTAGCAGCTGTACTCC 59.356 40.000 16.64 0.00 0.00 3.85
969 1432 6.727824 TCTGAAGAAAATTAGCAGCTGTAC 57.272 37.500 16.64 0.00 0.00 2.90
970 1433 7.744087 TTTCTGAAGAAAATTAGCAGCTGTA 57.256 32.000 16.64 3.74 40.68 2.74
971 1434 6.639632 TTTCTGAAGAAAATTAGCAGCTGT 57.360 33.333 16.64 4.79 40.68 4.40
1020 1486 1.341482 ACGCAGATGAGGAGAAGGAGA 60.341 52.381 0.00 0.00 0.00 3.71
1126 1596 1.596260 CATTGGCTCATCTACGCTGTG 59.404 52.381 0.00 0.00 0.00 3.66
1362 1832 0.242825 CGTTAAGCCACAGGACGAGA 59.757 55.000 0.00 0.00 35.90 4.04
1480 1950 1.144057 CATCCTGGACCTGCGTACC 59.856 63.158 0.00 0.00 0.00 3.34
1482 1952 1.676678 GAGCATCCTGGACCTGCGTA 61.677 60.000 14.74 0.00 40.78 4.42
1484 1954 2.202987 GAGCATCCTGGACCTGCG 60.203 66.667 14.74 0.00 40.78 5.18
1583 2082 0.250553 CCTAACCGTTGTTCCAGGCA 60.251 55.000 0.00 0.00 35.87 4.75
1606 2105 1.784283 GCGGTTGTTGTAATGTTGTGC 59.216 47.619 0.00 0.00 0.00 4.57
1646 2145 0.533978 TTCACATGTCACGTGTGGGG 60.534 55.000 26.51 5.06 45.34 4.96
1719 2222 1.719529 TGGAGTAGGAAAACCCGACA 58.280 50.000 0.00 0.00 42.28 4.35
1896 2399 2.046023 TGGCTCAAGATGGTGGCG 60.046 61.111 0.00 0.00 0.00 5.69
1962 2465 8.256611 ACTGTTATGAAGTGTATGCTTAACTG 57.743 34.615 0.00 0.00 32.52 3.16
1969 2472 7.802738 TGTGTTAACTGTTATGAAGTGTATGC 58.197 34.615 7.22 0.00 0.00 3.14
2010 2517 9.982651 GTAGAGATCCACAAGCTAATTTATACA 57.017 33.333 0.00 0.00 0.00 2.29
2017 2524 5.426833 ACCAAGTAGAGATCCACAAGCTAAT 59.573 40.000 0.00 0.00 0.00 1.73
2018 2525 4.777896 ACCAAGTAGAGATCCACAAGCTAA 59.222 41.667 0.00 0.00 0.00 3.09
2047 2554 1.638070 TCATCAAGGTATGGGTTGCCA 59.362 47.619 0.00 0.00 31.27 4.92
2059 2566 6.421377 TTCGTGTTCATGTTATCATCAAGG 57.579 37.500 0.00 0.00 31.15 3.61
2089 2596 2.094182 GTGGCTCCACAAGAAGTCGATA 60.094 50.000 13.81 0.00 45.53 2.92
2151 2658 3.411446 TCCGACAGATTGAAATTGCAGT 58.589 40.909 0.00 0.00 0.00 4.40
2176 2683 1.809619 GGCGTCAGAGCATGCGTTA 60.810 57.895 13.01 0.00 39.27 3.18
2178 2685 3.670637 ATGGCGTCAGAGCATGCGT 62.671 57.895 13.01 0.00 39.27 5.24
2203 2710 4.100189 AGGAGAGTGTTGGCAGTATCATAC 59.900 45.833 0.00 0.00 37.86 2.39
2302 2813 7.493971 CCACTATCAGAAAAGATGTACTCCAAG 59.506 40.741 0.00 0.00 0.00 3.61
2384 2899 4.334759 CACCTGCACAATTTAGAGAGGATG 59.665 45.833 0.00 0.00 0.00 3.51
2389 2904 2.436417 GGCACCTGCACAATTTAGAGA 58.564 47.619 0.00 0.00 44.36 3.10
2666 3181 2.218603 CCTACCTGAACAACCACACAC 58.781 52.381 0.00 0.00 0.00 3.82
2801 3316 2.355412 GGAGTACCTTGTGGCGGTAAAT 60.355 50.000 0.00 0.00 38.64 1.40
2813 3328 3.136641 AGGTCATGGATGGAGTACCTT 57.863 47.619 0.00 0.00 33.59 3.50
2951 3470 2.757894 TACCCTCCAACCTGCAAAAA 57.242 45.000 0.00 0.00 0.00 1.94
2952 3471 2.158385 ACATACCCTCCAACCTGCAAAA 60.158 45.455 0.00 0.00 0.00 2.44
2971 3490 1.295357 CGCCCGTGTATGCTTGAACA 61.295 55.000 0.00 0.00 0.00 3.18
2975 3494 1.582610 AAACCGCCCGTGTATGCTTG 61.583 55.000 0.00 0.00 0.00 4.01
3088 3607 3.308473 GCCCCTTTTCATAGAGTGGAAGT 60.308 47.826 0.00 0.00 0.00 3.01
3126 3646 4.376413 GCATGACACGACAGTTCTTACTTG 60.376 45.833 0.00 0.00 30.26 3.16
3136 3656 1.004595 CTGGATGCATGACACGACAG 58.995 55.000 2.46 0.00 0.00 3.51
3140 3660 2.740447 CCATATCTGGATGCATGACACG 59.260 50.000 2.46 0.00 46.37 4.49
3215 3738 4.363991 AGGATACATTCAAGAGCCCATC 57.636 45.455 0.00 0.00 41.41 3.51
3217 3740 3.371917 CCAAGGATACATTCAAGAGCCCA 60.372 47.826 0.00 0.00 41.41 5.36
3230 3753 6.385649 TTGAGAAACAAACACCAAGGATAC 57.614 37.500 0.00 0.00 35.39 2.24
3233 3756 4.441356 GCATTGAGAAACAAACACCAAGGA 60.441 41.667 0.00 0.00 42.03 3.36
3234 3757 3.803778 GCATTGAGAAACAAACACCAAGG 59.196 43.478 0.00 0.00 42.03 3.61
3235 3758 4.431809 TGCATTGAGAAACAAACACCAAG 58.568 39.130 0.00 0.00 42.03 3.61
3236 3759 4.159321 TCTGCATTGAGAAACAAACACCAA 59.841 37.500 0.00 0.00 42.03 3.67
3237 3760 3.698539 TCTGCATTGAGAAACAAACACCA 59.301 39.130 0.00 0.00 42.03 4.17
3238 3761 4.305989 TCTGCATTGAGAAACAAACACC 57.694 40.909 0.00 0.00 42.03 4.16
3239 3762 5.581605 TCTTCTGCATTGAGAAACAAACAC 58.418 37.500 0.00 0.00 42.03 3.32
3241 3764 8.976986 ATAATCTTCTGCATTGAGAAACAAAC 57.023 30.769 0.00 0.00 42.03 2.93
3246 3769 8.896744 CCAGTTATAATCTTCTGCATTGAGAAA 58.103 33.333 0.00 0.00 31.52 2.52
3247 3770 7.012704 GCCAGTTATAATCTTCTGCATTGAGAA 59.987 37.037 0.00 0.00 0.00 2.87
3248 3771 6.484643 GCCAGTTATAATCTTCTGCATTGAGA 59.515 38.462 0.00 0.00 0.00 3.27
3250 3773 6.261603 CAGCCAGTTATAATCTTCTGCATTGA 59.738 38.462 0.00 0.00 0.00 2.57
3251 3774 6.039047 ACAGCCAGTTATAATCTTCTGCATTG 59.961 38.462 0.00 0.00 0.00 2.82
3252 3775 6.125029 ACAGCCAGTTATAATCTTCTGCATT 58.875 36.000 0.00 0.00 0.00 3.56
3253 3776 5.688807 ACAGCCAGTTATAATCTTCTGCAT 58.311 37.500 0.00 0.00 0.00 3.96
3254 3777 5.102953 ACAGCCAGTTATAATCTTCTGCA 57.897 39.130 0.00 0.00 0.00 4.41
3256 3779 5.882557 ACCAACAGCCAGTTATAATCTTCTG 59.117 40.000 0.00 0.00 38.74 3.02
3257 3780 6.067217 ACCAACAGCCAGTTATAATCTTCT 57.933 37.500 0.00 0.00 38.74 2.85
3258 3781 6.759497 AACCAACAGCCAGTTATAATCTTC 57.241 37.500 0.00 0.00 38.74 2.87
3259 3782 6.828785 CCTAACCAACAGCCAGTTATAATCTT 59.171 38.462 0.00 0.00 38.74 2.40
3260 3783 6.069615 ACCTAACCAACAGCCAGTTATAATCT 60.070 38.462 0.00 0.00 38.74 2.40
3261 3784 6.120220 ACCTAACCAACAGCCAGTTATAATC 58.880 40.000 0.00 0.00 38.74 1.75
3263 3786 5.508280 ACCTAACCAACAGCCAGTTATAA 57.492 39.130 0.00 0.00 38.74 0.98
3264 3787 6.384595 TCATACCTAACCAACAGCCAGTTATA 59.615 38.462 0.00 0.00 38.74 0.98
3266 3789 4.532916 TCATACCTAACCAACAGCCAGTTA 59.467 41.667 0.00 0.00 38.74 2.24
3267 3790 3.329520 TCATACCTAACCAACAGCCAGTT 59.670 43.478 0.00 0.00 42.42 3.16
3268 3791 2.910319 TCATACCTAACCAACAGCCAGT 59.090 45.455 0.00 0.00 0.00 4.00
3270 3793 3.178046 TCTCATACCTAACCAACAGCCA 58.822 45.455 0.00 0.00 0.00 4.75
3271 3794 3.906720 TCTCATACCTAACCAACAGCC 57.093 47.619 0.00 0.00 0.00 4.85
3272 3795 6.702282 GTCTATTCTCATACCTAACCAACAGC 59.298 42.308 0.00 0.00 0.00 4.40
3274 3797 7.727578 TGTCTATTCTCATACCTAACCAACA 57.272 36.000 0.00 0.00 0.00 3.33
3276 3799 8.141298 TGTTGTCTATTCTCATACCTAACCAA 57.859 34.615 0.00 0.00 0.00 3.67
3277 3800 7.727578 TGTTGTCTATTCTCATACCTAACCA 57.272 36.000 0.00 0.00 0.00 3.67
3286 3809 8.184192 CCGCTTAAAATTGTTGTCTATTCTCAT 58.816 33.333 0.00 0.00 0.00 2.90
3287 3810 7.389330 TCCGCTTAAAATTGTTGTCTATTCTCA 59.611 33.333 0.00 0.00 0.00 3.27
3288 3811 7.748847 TCCGCTTAAAATTGTTGTCTATTCTC 58.251 34.615 0.00 0.00 0.00 2.87
3289 3812 7.681939 TCCGCTTAAAATTGTTGTCTATTCT 57.318 32.000 0.00 0.00 0.00 2.40
3290 3813 8.736751 TTTCCGCTTAAAATTGTTGTCTATTC 57.263 30.769 0.00 0.00 0.00 1.75
3293 3816 7.974501 TGTTTTTCCGCTTAAAATTGTTGTCTA 59.025 29.630 0.00 0.00 0.00 2.59
3294 3817 6.814146 TGTTTTTCCGCTTAAAATTGTTGTCT 59.186 30.769 0.00 0.00 0.00 3.41
3295 3818 6.994992 TGTTTTTCCGCTTAAAATTGTTGTC 58.005 32.000 0.00 0.00 0.00 3.18
3296 3819 6.969828 TGTTTTTCCGCTTAAAATTGTTGT 57.030 29.167 0.00 0.00 0.00 3.32
3302 3825 9.797556 GAGGTATAATGTTTTTCCGCTTAAAAT 57.202 29.630 0.00 0.00 0.00 1.82
3305 3828 7.825270 TGAGAGGTATAATGTTTTTCCGCTTAA 59.175 33.333 0.00 0.00 0.00 1.85
3307 3830 6.177610 TGAGAGGTATAATGTTTTTCCGCTT 58.822 36.000 0.00 0.00 0.00 4.68
3309 3832 6.128117 TGTTGAGAGGTATAATGTTTTTCCGC 60.128 38.462 0.00 0.00 0.00 5.54
3310 3833 7.372451 TGTTGAGAGGTATAATGTTTTTCCG 57.628 36.000 0.00 0.00 0.00 4.30
3324 3847 3.009143 GGTGTCCCTAATTGTTGAGAGGT 59.991 47.826 0.00 0.00 0.00 3.85
3341 3864 0.893727 AAGTGCCATTTCCGGGTGTC 60.894 55.000 0.00 0.00 0.00 3.67
3343 3866 0.893270 TGAAGTGCCATTTCCGGGTG 60.893 55.000 0.00 0.00 0.00 4.61
3367 3901 1.003476 GGGGCATTTTTGGGTGCAG 60.003 57.895 0.00 0.00 43.00 4.41
3397 3931 5.215160 CAACTCCTGCATCAACTTTGTAAC 58.785 41.667 0.00 0.00 0.00 2.50
3408 3942 4.402851 TGGCACAACTCCTGCATC 57.597 55.556 0.00 0.00 36.27 3.91
3421 3955 3.838565 TGTTTTGTTTCCTCCTATGGCA 58.161 40.909 0.00 0.00 0.00 4.92
3423 3957 5.782893 TGTTGTTTTGTTTCCTCCTATGG 57.217 39.130 0.00 0.00 0.00 2.74
3425 3959 7.418337 AACTTGTTGTTTTGTTTCCTCCTAT 57.582 32.000 0.00 0.00 34.84 2.57
3482 4016 8.705594 TGGTTTAAATGGAGGTTTGATAACAAA 58.294 29.630 0.00 0.00 42.66 2.83
3540 4074 2.556622 ACCGACCATCAAATTCCACAAC 59.443 45.455 0.00 0.00 0.00 3.32
3549 4083 6.938507 ACAGTATAGTTTACCGACCATCAAA 58.061 36.000 0.00 0.00 0.00 2.69
3575 4109 9.541143 TCGTAATCATCTTCACTGCATAATTAA 57.459 29.630 0.00 0.00 0.00 1.40
3576 4110 9.710900 ATCGTAATCATCTTCACTGCATAATTA 57.289 29.630 0.00 0.00 0.00 1.40
3577 4111 8.613060 ATCGTAATCATCTTCACTGCATAATT 57.387 30.769 0.00 0.00 0.00 1.40
3578 4112 8.613060 AATCGTAATCATCTTCACTGCATAAT 57.387 30.769 0.00 0.00 0.00 1.28
3579 4113 9.196552 CTAATCGTAATCATCTTCACTGCATAA 57.803 33.333 0.00 0.00 0.00 1.90
3580 4114 7.814587 CCTAATCGTAATCATCTTCACTGCATA 59.185 37.037 0.00 0.00 0.00 3.14
3582 4116 5.985530 CCTAATCGTAATCATCTTCACTGCA 59.014 40.000 0.00 0.00 0.00 4.41
3583 4117 6.216569 TCCTAATCGTAATCATCTTCACTGC 58.783 40.000 0.00 0.00 0.00 4.40
3584 4118 7.096436 CGTTCCTAATCGTAATCATCTTCACTG 60.096 40.741 0.00 0.00 0.00 3.66
3585 4119 6.918569 CGTTCCTAATCGTAATCATCTTCACT 59.081 38.462 0.00 0.00 0.00 3.41
3586 4120 6.916387 TCGTTCCTAATCGTAATCATCTTCAC 59.084 38.462 0.00 0.00 0.00 3.18
3587 4121 6.916387 GTCGTTCCTAATCGTAATCATCTTCA 59.084 38.462 0.00 0.00 0.00 3.02
3588 4122 6.916387 TGTCGTTCCTAATCGTAATCATCTTC 59.084 38.462 0.00 0.00 0.00 2.87
3599 4133 5.086058 CCAAAAACATGTCGTTCCTAATCG 58.914 41.667 0.00 0.00 36.59 3.34
3609 4143 0.312416 TTCCCGCCAAAAACATGTCG 59.688 50.000 0.00 0.00 0.00 4.35
3611 4145 1.482593 TGTTTCCCGCCAAAAACATGT 59.517 42.857 0.00 0.00 39.70 3.21
3622 4156 0.963355 TTGCACCCTATGTTTCCCGC 60.963 55.000 0.00 0.00 0.00 6.13
3626 4160 3.572255 TCAACCTTTGCACCCTATGTTTC 59.428 43.478 0.00 0.00 0.00 2.78
3630 4164 3.763360 TGATTCAACCTTTGCACCCTATG 59.237 43.478 0.00 0.00 0.00 2.23
3633 4167 2.158475 TCTGATTCAACCTTTGCACCCT 60.158 45.455 0.00 0.00 0.00 4.34
3634 4168 2.029918 GTCTGATTCAACCTTTGCACCC 60.030 50.000 0.00 0.00 0.00 4.61
3642 4176 3.996921 AGATGCAGTCTGATTCAACCT 57.003 42.857 3.32 0.00 35.31 3.50
3643 4177 4.217118 ACAAAGATGCAGTCTGATTCAACC 59.783 41.667 3.32 0.00 37.23 3.77
3644 4178 5.368256 ACAAAGATGCAGTCTGATTCAAC 57.632 39.130 3.32 0.00 37.23 3.18
3645 4179 6.148315 CACTACAAAGATGCAGTCTGATTCAA 59.852 38.462 3.32 0.00 37.23 2.69
3646 4180 5.640783 CACTACAAAGATGCAGTCTGATTCA 59.359 40.000 3.32 0.00 37.23 2.57
3647 4181 5.871524 TCACTACAAAGATGCAGTCTGATTC 59.128 40.000 3.32 0.00 37.23 2.52
3648 4182 5.798132 TCACTACAAAGATGCAGTCTGATT 58.202 37.500 3.32 0.00 37.23 2.57
3649 4183 5.411831 TCACTACAAAGATGCAGTCTGAT 57.588 39.130 3.32 0.00 37.23 2.90
3650 4184 4.871933 TCACTACAAAGATGCAGTCTGA 57.128 40.909 3.32 0.00 37.23 3.27
3651 4185 5.929697 TTTCACTACAAAGATGCAGTCTG 57.070 39.130 0.00 0.00 37.23 3.51
3652 4186 6.233434 TGATTTCACTACAAAGATGCAGTCT 58.767 36.000 0.00 0.00 39.43 3.24
3653 4187 6.148480 ACTGATTTCACTACAAAGATGCAGTC 59.852 38.462 0.00 0.00 30.49 3.51
3654 4188 6.000219 ACTGATTTCACTACAAAGATGCAGT 59.000 36.000 0.00 0.00 33.27 4.40
3655 4189 6.312487 CACTGATTTCACTACAAAGATGCAG 58.688 40.000 0.00 0.00 0.00 4.41
3656 4190 5.335113 GCACTGATTTCACTACAAAGATGCA 60.335 40.000 0.00 0.00 0.00 3.96
3657 4191 5.091431 GCACTGATTTCACTACAAAGATGC 58.909 41.667 0.00 0.00 0.00 3.91
3658 4192 6.245115 TGCACTGATTTCACTACAAAGATG 57.755 37.500 0.00 0.00 0.00 2.90
3659 4193 5.106396 GCTGCACTGATTTCACTACAAAGAT 60.106 40.000 0.00 0.00 0.00 2.40
3660 4194 4.214119 GCTGCACTGATTTCACTACAAAGA 59.786 41.667 0.00 0.00 0.00 2.52
3661 4195 4.470462 GCTGCACTGATTTCACTACAAAG 58.530 43.478 0.00 0.00 0.00 2.77
3662 4196 3.058983 CGCTGCACTGATTTCACTACAAA 60.059 43.478 0.00 0.00 0.00 2.83
3663 4197 2.480037 CGCTGCACTGATTTCACTACAA 59.520 45.455 0.00 0.00 0.00 2.41
3664 4198 2.068519 CGCTGCACTGATTTCACTACA 58.931 47.619 0.00 0.00 0.00 2.74
3665 4199 2.337583 TCGCTGCACTGATTTCACTAC 58.662 47.619 0.00 0.00 0.00 2.73
3666 4200 2.736721 GTTCGCTGCACTGATTTCACTA 59.263 45.455 0.00 0.00 0.00 2.74
3667 4201 1.532868 GTTCGCTGCACTGATTTCACT 59.467 47.619 0.00 0.00 0.00 3.41
3668 4202 1.264020 TGTTCGCTGCACTGATTTCAC 59.736 47.619 0.00 0.00 0.00 3.18
3669 4203 1.532437 CTGTTCGCTGCACTGATTTCA 59.468 47.619 0.00 0.00 0.00 2.69
3670 4204 1.800586 TCTGTTCGCTGCACTGATTTC 59.199 47.619 0.00 0.00 0.00 2.17
3671 4205 1.882912 TCTGTTCGCTGCACTGATTT 58.117 45.000 0.00 0.00 0.00 2.17
3672 4206 1.736126 CATCTGTTCGCTGCACTGATT 59.264 47.619 8.95 0.00 32.24 2.57
3673 4207 1.066645 TCATCTGTTCGCTGCACTGAT 60.067 47.619 0.00 3.71 34.21 2.90
3674 4208 0.318120 TCATCTGTTCGCTGCACTGA 59.682 50.000 0.00 1.28 0.00 3.41
3675 4209 1.366679 ATCATCTGTTCGCTGCACTG 58.633 50.000 0.00 0.00 0.00 3.66
3676 4210 2.967599 TATCATCTGTTCGCTGCACT 57.032 45.000 0.00 0.00 0.00 4.40
3677 4211 3.388308 AGATATCATCTGTTCGCTGCAC 58.612 45.455 5.32 0.00 38.44 4.57
3678 4212 3.646946 GAGATATCATCTGTTCGCTGCA 58.353 45.455 5.32 0.00 40.38 4.41
3679 4213 2.660715 CGAGATATCATCTGTTCGCTGC 59.339 50.000 5.32 0.00 40.38 5.25
3680 4214 3.240884 CCGAGATATCATCTGTTCGCTG 58.759 50.000 5.32 0.00 40.38 5.18
3681 4215 2.887783 ACCGAGATATCATCTGTTCGCT 59.112 45.455 5.32 0.00 40.38 4.93
3682 4216 3.238441 GACCGAGATATCATCTGTTCGC 58.762 50.000 5.32 0.00 40.38 4.70
3683 4217 3.668226 CGGACCGAGATATCATCTGTTCG 60.668 52.174 8.64 8.74 40.38 3.95
3684 4218 3.366476 CCGGACCGAGATATCATCTGTTC 60.366 52.174 17.49 1.17 40.38 3.18
3685 4219 2.558795 CCGGACCGAGATATCATCTGTT 59.441 50.000 17.49 0.00 40.38 3.16
3686 4220 2.163509 CCGGACCGAGATATCATCTGT 58.836 52.381 17.49 2.69 40.38 3.41
3687 4221 2.437413 TCCGGACCGAGATATCATCTG 58.563 52.381 17.49 2.34 40.38 2.90
3688 4222 2.881111 TCCGGACCGAGATATCATCT 57.119 50.000 17.49 0.00 43.70 2.90
3689 4223 2.755655 ACATCCGGACCGAGATATCATC 59.244 50.000 17.49 0.00 0.00 2.92
3690 4224 2.493675 CACATCCGGACCGAGATATCAT 59.506 50.000 17.49 0.98 0.00 2.45
3691 4225 1.886542 CACATCCGGACCGAGATATCA 59.113 52.381 17.49 0.00 0.00 2.15
3692 4226 1.202582 CCACATCCGGACCGAGATATC 59.797 57.143 17.49 0.00 0.00 1.63
3693 4227 1.257743 CCACATCCGGACCGAGATAT 58.742 55.000 17.49 2.69 0.00 1.63
3694 4228 1.461091 GCCACATCCGGACCGAGATA 61.461 60.000 17.49 0.00 0.00 1.98
3695 4229 2.797278 GCCACATCCGGACCGAGAT 61.797 63.158 17.49 13.46 0.00 2.75
3696 4230 3.458163 GCCACATCCGGACCGAGA 61.458 66.667 17.49 11.57 0.00 4.04
3697 4231 2.593468 ATTGCCACATCCGGACCGAG 62.593 60.000 17.49 7.45 0.00 4.63
3698 4232 2.587322 GATTGCCACATCCGGACCGA 62.587 60.000 17.49 1.45 0.00 4.69
3699 4233 2.124736 ATTGCCACATCCGGACCG 60.125 61.111 6.12 6.99 0.00 4.79
3700 4234 0.466189 ATGATTGCCACATCCGGACC 60.466 55.000 6.12 0.00 0.00 4.46
3701 4235 0.947244 GATGATTGCCACATCCGGAC 59.053 55.000 6.12 0.00 38.40 4.79
3702 4236 0.545646 TGATGATTGCCACATCCGGA 59.454 50.000 6.61 6.61 42.11 5.14
3703 4237 1.335810 CTTGATGATTGCCACATCCGG 59.664 52.381 0.00 0.00 42.11 5.14
3704 4238 2.291365 TCTTGATGATTGCCACATCCG 58.709 47.619 0.00 0.00 42.11 4.18
3705 4239 4.724074 TTTCTTGATGATTGCCACATCC 57.276 40.909 0.00 0.00 42.11 3.51
3706 4240 5.522460 CCAATTTCTTGATGATTGCCACATC 59.478 40.000 0.00 0.00 42.81 3.06
3707 4241 5.424757 CCAATTTCTTGATGATTGCCACAT 58.575 37.500 0.00 0.00 34.04 3.21
3708 4242 4.823157 CCAATTTCTTGATGATTGCCACA 58.177 39.130 0.00 0.00 34.04 4.17
3709 4243 3.619929 GCCAATTTCTTGATGATTGCCAC 59.380 43.478 0.00 0.00 34.04 5.01
3710 4244 3.369681 GGCCAATTTCTTGATGATTGCCA 60.370 43.478 0.00 0.00 34.04 4.92
3711 4245 3.200483 GGCCAATTTCTTGATGATTGCC 58.800 45.455 0.00 0.00 34.04 4.52
3712 4246 3.864243 TGGCCAATTTCTTGATGATTGC 58.136 40.909 0.61 0.00 34.04 3.56
3713 4247 6.036735 GTCAATGGCCAATTTCTTGATGATTG 59.963 38.462 19.00 10.50 34.04 2.67
3714 4248 6.070424 AGTCAATGGCCAATTTCTTGATGATT 60.070 34.615 19.00 5.96 34.04 2.57
3715 4249 5.424252 AGTCAATGGCCAATTTCTTGATGAT 59.576 36.000 19.00 8.23 34.04 2.45
3716 4250 4.773674 AGTCAATGGCCAATTTCTTGATGA 59.226 37.500 19.00 6.70 34.04 2.92
3717 4251 5.080969 AGTCAATGGCCAATTTCTTGATG 57.919 39.130 19.00 4.75 34.04 3.07
3718 4252 5.750352 AAGTCAATGGCCAATTTCTTGAT 57.250 34.783 19.00 4.54 34.04 2.57
3719 4253 5.299148 CAAAGTCAATGGCCAATTTCTTGA 58.701 37.500 10.96 12.57 34.04 3.02
3720 4254 4.083696 GCAAAGTCAATGGCCAATTTCTTG 60.084 41.667 10.96 9.96 0.00 3.02
3721 4255 4.067192 GCAAAGTCAATGGCCAATTTCTT 58.933 39.130 10.96 10.11 0.00 2.52
3722 4256 3.667360 GCAAAGTCAATGGCCAATTTCT 58.333 40.909 10.96 3.53 0.00 2.52
3723 4257 2.412770 CGCAAAGTCAATGGCCAATTTC 59.587 45.455 10.96 0.79 0.00 2.17
3724 4258 2.415776 CGCAAAGTCAATGGCCAATTT 58.584 42.857 10.96 0.00 0.00 1.82
3725 4259 1.338011 CCGCAAAGTCAATGGCCAATT 60.338 47.619 10.96 1.41 0.00 2.32
3726 4260 0.247185 CCGCAAAGTCAATGGCCAAT 59.753 50.000 10.96 0.00 0.00 3.16
3727 4261 0.825425 TCCGCAAAGTCAATGGCCAA 60.825 50.000 10.96 0.00 0.00 4.52
3728 4262 0.825425 TTCCGCAAAGTCAATGGCCA 60.825 50.000 8.56 8.56 0.00 5.36
3729 4263 0.109132 CTTCCGCAAAGTCAATGGCC 60.109 55.000 0.00 0.00 0.00 5.36
3730 4264 0.598065 ACTTCCGCAAAGTCAATGGC 59.402 50.000 0.00 0.00 45.28 4.40
3731 4265 3.941483 AGATACTTCCGCAAAGTCAATGG 59.059 43.478 4.84 0.00 45.28 3.16
3732 4266 5.551760 AAGATACTTCCGCAAAGTCAATG 57.448 39.130 4.84 0.00 45.28 2.82
3733 4267 5.817816 CCTAAGATACTTCCGCAAAGTCAAT 59.182 40.000 4.84 0.00 45.28 2.57
3734 4268 5.175859 CCTAAGATACTTCCGCAAAGTCAA 58.824 41.667 4.84 0.00 45.28 3.18
3735 4269 4.382685 CCCTAAGATACTTCCGCAAAGTCA 60.383 45.833 4.84 0.00 45.28 3.41
3736 4270 4.120589 CCCTAAGATACTTCCGCAAAGTC 58.879 47.826 4.84 0.00 45.28 3.01
3738 4272 2.872858 GCCCTAAGATACTTCCGCAAAG 59.127 50.000 0.00 0.00 41.08 2.77
3739 4273 2.740580 CGCCCTAAGATACTTCCGCAAA 60.741 50.000 0.00 0.00 0.00 3.68
3740 4274 1.202486 CGCCCTAAGATACTTCCGCAA 60.202 52.381 0.00 0.00 0.00 4.85
3741 4275 0.387929 CGCCCTAAGATACTTCCGCA 59.612 55.000 0.00 0.00 0.00 5.69
3742 4276 0.319641 CCGCCCTAAGATACTTCCGC 60.320 60.000 0.00 0.00 0.00 5.54
3743 4277 0.319641 GCCGCCCTAAGATACTTCCG 60.320 60.000 0.00 0.00 0.00 4.30
3744 4278 0.756903 TGCCGCCCTAAGATACTTCC 59.243 55.000 0.00 0.00 0.00 3.46
3745 4279 2.300437 AGATGCCGCCCTAAGATACTTC 59.700 50.000 0.00 0.00 0.00 3.01
3746 4280 2.330216 AGATGCCGCCCTAAGATACTT 58.670 47.619 0.00 0.00 0.00 2.24
3747 4281 2.016905 AGATGCCGCCCTAAGATACT 57.983 50.000 0.00 0.00 0.00 2.12
3748 4282 2.037251 TGAAGATGCCGCCCTAAGATAC 59.963 50.000 0.00 0.00 0.00 2.24
3749 4283 2.325484 TGAAGATGCCGCCCTAAGATA 58.675 47.619 0.00 0.00 0.00 1.98
3750 4284 1.131638 TGAAGATGCCGCCCTAAGAT 58.868 50.000 0.00 0.00 0.00 2.40
3751 4285 0.908910 TTGAAGATGCCGCCCTAAGA 59.091 50.000 0.00 0.00 0.00 2.10
3752 4286 1.017387 GTTGAAGATGCCGCCCTAAG 58.983 55.000 0.00 0.00 0.00 2.18
3753 4287 0.742990 CGTTGAAGATGCCGCCCTAA 60.743 55.000 0.00 0.00 0.00 2.69
3754 4288 1.153449 CGTTGAAGATGCCGCCCTA 60.153 57.895 0.00 0.00 0.00 3.53
3755 4289 2.436646 CGTTGAAGATGCCGCCCT 60.437 61.111 0.00 0.00 0.00 5.19
3756 4290 4.179579 GCGTTGAAGATGCCGCCC 62.180 66.667 0.00 0.00 40.25 6.13
3761 4295 0.811616 AGGATCGGCGTTGAAGATGC 60.812 55.000 6.85 0.00 39.65 3.91
3762 4296 1.212616 GAGGATCGGCGTTGAAGATG 58.787 55.000 6.85 0.00 0.00 2.90
3763 4297 0.824109 TGAGGATCGGCGTTGAAGAT 59.176 50.000 6.85 0.00 38.61 2.40
3764 4298 0.606096 TTGAGGATCGGCGTTGAAGA 59.394 50.000 6.85 0.00 38.61 2.87
3765 4299 1.128692 GTTTGAGGATCGGCGTTGAAG 59.871 52.381 6.85 0.00 38.61 3.02
3766 4300 1.153353 GTTTGAGGATCGGCGTTGAA 58.847 50.000 6.85 0.00 38.61 2.69
3767 4301 0.672401 GGTTTGAGGATCGGCGTTGA 60.672 55.000 6.85 0.00 38.61 3.18
3768 4302 1.794222 GGTTTGAGGATCGGCGTTG 59.206 57.895 6.85 0.00 38.61 4.10
3769 4303 1.740296 CGGTTTGAGGATCGGCGTT 60.740 57.895 6.85 0.00 38.61 4.84
3770 4304 2.125673 CGGTTTGAGGATCGGCGT 60.126 61.111 6.85 0.00 38.61 5.68
3771 4305 2.125673 ACGGTTTGAGGATCGGCG 60.126 61.111 0.00 0.00 38.61 6.46
3772 4306 1.814169 GGACGGTTTGAGGATCGGC 60.814 63.158 0.00 0.00 38.61 5.54
3773 4307 1.518572 CGGACGGTTTGAGGATCGG 60.519 63.158 0.00 0.00 38.61 4.18
3774 4308 1.518572 CCGGACGGTTTGAGGATCG 60.519 63.158 0.00 0.00 38.61 3.69
3775 4309 0.459759 GTCCGGACGGTTTGAGGATC 60.460 60.000 20.85 0.00 36.47 3.36
3776 4310 1.595357 GTCCGGACGGTTTGAGGAT 59.405 57.895 20.85 0.00 36.47 3.24
3777 4311 2.576832 GGTCCGGACGGTTTGAGGA 61.577 63.158 27.68 0.00 36.47 3.71
3778 4312 2.047560 GGTCCGGACGGTTTGAGG 60.048 66.667 27.68 0.00 36.47 3.86
3779 4313 1.666872 GTGGTCCGGACGGTTTGAG 60.667 63.158 27.68 0.00 36.47 3.02
3780 4314 2.422591 GTGGTCCGGACGGTTTGA 59.577 61.111 27.68 4.83 36.47 2.69
3781 4315 3.039588 CGTGGTCCGGACGGTTTG 61.040 66.667 27.68 11.97 36.47 2.93
3782 4316 3.539791 ACGTGGTCCGGACGGTTT 61.540 61.111 27.68 9.93 41.21 3.27
3783 4317 4.289245 CACGTGGTCCGGACGGTT 62.289 66.667 27.68 9.55 41.21 4.44
3797 4331 3.033764 CAACACGTCCGGACCACG 61.034 66.667 28.52 20.14 43.13 4.94
3798 4332 2.107546 ACAACACGTCCGGACCAC 59.892 61.111 28.52 5.23 0.00 4.16
3799 4333 2.107343 CACAACACGTCCGGACCA 59.893 61.111 28.52 0.00 0.00 4.02
3800 4334 3.343421 GCACAACACGTCCGGACC 61.343 66.667 28.52 11.28 0.00 4.46
3801 4335 3.343421 GGCACAACACGTCCGGAC 61.343 66.667 25.28 25.28 0.00 4.79
3802 4336 3.851128 TGGCACAACACGTCCGGA 61.851 61.111 0.00 0.00 31.92 5.14
3822 4356 1.226974 CCGATATAGGCCCGCATCG 60.227 63.158 18.67 18.67 39.88 3.84
3823 4357 0.179108 GACCGATATAGGCCCGCATC 60.179 60.000 0.00 0.00 33.69 3.91
3824 4358 1.614241 GGACCGATATAGGCCCGCAT 61.614 60.000 0.00 0.00 33.69 4.73
3825 4359 2.280552 GGACCGATATAGGCCCGCA 61.281 63.158 0.00 0.00 33.69 5.69
3826 4360 2.577593 GGACCGATATAGGCCCGC 59.422 66.667 0.00 0.00 33.69 6.13
3828 4362 1.982938 AGCGGACCGATATAGGCCC 60.983 63.158 20.50 0.00 33.69 5.80
3829 4363 1.215647 CAGCGGACCGATATAGGCC 59.784 63.158 20.50 0.00 33.69 5.19
3830 4364 0.171455 CTCAGCGGACCGATATAGGC 59.829 60.000 20.50 0.00 33.69 3.93
3831 4365 0.171455 GCTCAGCGGACCGATATAGG 59.829 60.000 20.50 0.00 37.30 2.57
3832 4366 3.704381 GCTCAGCGGACCGATATAG 57.296 57.895 20.50 13.56 0.00 1.31
3844 4378 1.425428 CATTTCCGAACCGCTCAGC 59.575 57.895 0.00 0.00 0.00 4.26
3845 4379 1.021390 AGCATTTCCGAACCGCTCAG 61.021 55.000 0.00 0.00 0.00 3.35
3846 4380 0.605319 AAGCATTTCCGAACCGCTCA 60.605 50.000 4.37 0.00 31.17 4.26
3847 4381 0.521735 AAAGCATTTCCGAACCGCTC 59.478 50.000 4.37 0.00 27.08 5.03
3848 4382 2.641197 AAAGCATTTCCGAACCGCT 58.359 47.368 0.00 0.00 27.08 5.52
3858 4392 1.963515 ACTTTGCGGGAGAAAGCATTT 59.036 42.857 0.00 0.00 43.42 2.32
3859 4393 1.270550 CACTTTGCGGGAGAAAGCATT 59.729 47.619 0.00 0.00 43.42 3.56
3860 4394 0.883833 CACTTTGCGGGAGAAAGCAT 59.116 50.000 0.00 0.00 43.42 3.79
3861 4395 1.172180 CCACTTTGCGGGAGAAAGCA 61.172 55.000 0.00 0.00 42.15 3.91
3862 4396 0.889186 TCCACTTTGCGGGAGAAAGC 60.889 55.000 0.00 0.00 34.33 3.51
3863 4397 3.322514 TCCACTTTGCGGGAGAAAG 57.677 52.632 0.00 0.00 36.63 2.62
3868 4402 0.181587 TTTGTCTCCACTTTGCGGGA 59.818 50.000 0.00 0.00 0.00 5.14
3869 4403 0.593128 CTTTGTCTCCACTTTGCGGG 59.407 55.000 0.00 0.00 0.00 6.13
3870 4404 1.308998 ACTTTGTCTCCACTTTGCGG 58.691 50.000 0.00 0.00 0.00 5.69
3871 4405 2.480419 CCTACTTTGTCTCCACTTTGCG 59.520 50.000 0.00 0.00 0.00 4.85
3872 4406 2.814336 CCCTACTTTGTCTCCACTTTGC 59.186 50.000 0.00 0.00 0.00 3.68
3873 4407 4.319177 CTCCCTACTTTGTCTCCACTTTG 58.681 47.826 0.00 0.00 0.00 2.77
3874 4408 3.328050 CCTCCCTACTTTGTCTCCACTTT 59.672 47.826 0.00 0.00 0.00 2.66
3875 4409 2.907042 CCTCCCTACTTTGTCTCCACTT 59.093 50.000 0.00 0.00 0.00 3.16
3876 4410 2.541466 CCTCCCTACTTTGTCTCCACT 58.459 52.381 0.00 0.00 0.00 4.00
3877 4411 1.555533 CCCTCCCTACTTTGTCTCCAC 59.444 57.143 0.00 0.00 0.00 4.02
3878 4412 1.435563 TCCCTCCCTACTTTGTCTCCA 59.564 52.381 0.00 0.00 0.00 3.86
3879 4413 2.249309 TCCCTCCCTACTTTGTCTCC 57.751 55.000 0.00 0.00 0.00 3.71
3880 4414 3.055747 CACTTCCCTCCCTACTTTGTCTC 60.056 52.174 0.00 0.00 0.00 3.36
3881 4415 2.907042 CACTTCCCTCCCTACTTTGTCT 59.093 50.000 0.00 0.00 0.00 3.41
3882 4416 2.615747 GCACTTCCCTCCCTACTTTGTC 60.616 54.545 0.00 0.00 0.00 3.18
3883 4417 1.351350 GCACTTCCCTCCCTACTTTGT 59.649 52.381 0.00 0.00 0.00 2.83
3884 4418 1.676014 CGCACTTCCCTCCCTACTTTG 60.676 57.143 0.00 0.00 0.00 2.77
3885 4419 0.613777 CGCACTTCCCTCCCTACTTT 59.386 55.000 0.00 0.00 0.00 2.66
3886 4420 1.900545 GCGCACTTCCCTCCCTACTT 61.901 60.000 0.30 0.00 0.00 2.24
3887 4421 2.359967 GCGCACTTCCCTCCCTACT 61.360 63.158 0.30 0.00 0.00 2.57
3888 4422 2.187163 GCGCACTTCCCTCCCTAC 59.813 66.667 0.30 0.00 0.00 3.18
3889 4423 3.458163 CGCGCACTTCCCTCCCTA 61.458 66.667 8.75 0.00 0.00 3.53
3891 4425 2.791501 TTAACGCGCACTTCCCTCCC 62.792 60.000 5.73 0.00 0.00 4.30
3892 4426 0.743345 ATTAACGCGCACTTCCCTCC 60.743 55.000 5.73 0.00 0.00 4.30
3893 4427 1.084289 AATTAACGCGCACTTCCCTC 58.916 50.000 5.73 0.00 0.00 4.30
3894 4428 1.199097 CAAATTAACGCGCACTTCCCT 59.801 47.619 5.73 0.00 0.00 4.20
3895 4429 1.613270 CAAATTAACGCGCACTTCCC 58.387 50.000 5.73 0.00 0.00 3.97
3896 4430 1.613270 CCAAATTAACGCGCACTTCC 58.387 50.000 5.73 0.00 0.00 3.46
3897 4431 1.068816 ACCCAAATTAACGCGCACTTC 60.069 47.619 5.73 0.00 0.00 3.01
3898 4432 0.955905 ACCCAAATTAACGCGCACTT 59.044 45.000 5.73 0.00 0.00 3.16
3899 4433 0.239879 CACCCAAATTAACGCGCACT 59.760 50.000 5.73 0.00 0.00 4.40
3905 4439 1.971792 GGAACGCACCCAAATTAACG 58.028 50.000 0.00 0.00 0.00 3.18
3937 4471 1.305219 ACATGCAAACCATCGACCGG 61.305 55.000 0.00 0.00 29.71 5.28
3958 4492 2.252072 GACACCGGGCAGGCATAGAA 62.252 60.000 6.32 0.00 46.52 2.10
3959 4493 2.687200 ACACCGGGCAGGCATAGA 60.687 61.111 6.32 0.00 46.52 1.98
3981 4515 2.113139 AACAGGGTGGAGCCAACG 59.887 61.111 0.00 0.00 39.65 4.10
3992 4526 4.058817 GACGAATATAAGAGGCAACAGGG 58.941 47.826 0.00 0.00 41.41 4.45
3994 4528 3.182572 GCGACGAATATAAGAGGCAACAG 59.817 47.826 0.00 0.00 41.41 3.16
4059 4593 3.583276 TTGGAGCGACCGTTGCGAT 62.583 57.895 5.06 0.00 42.61 4.58
4061 4595 3.777925 CTTGGAGCGACCGTTGCG 61.778 66.667 5.06 0.00 42.61 4.85
4075 4609 1.340308 TGATGGTCCTGATGCACCTTG 60.340 52.381 0.00 0.00 33.36 3.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.