Multiple sequence alignment - TraesCS5D01G246700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G246700 chr5D 100.000 6332 0 0 1 6332 354535659 354529328 0.000000e+00 11694.0
1 TraesCS5D01G246700 chr5D 96.491 57 1 1 5227 5283 327726474 327726529 6.760000e-15 93.5
2 TraesCS5D01G246700 chr5B 94.721 3921 122 30 1927 5835 418922161 418918314 0.000000e+00 6015.0
3 TraesCS5D01G246700 chr5B 93.871 669 32 5 1261 1921 418922872 418922205 0.000000e+00 1000.0
4 TraesCS5D01G246700 chr5B 86.824 850 42 26 329 1153 418923687 418922883 0.000000e+00 885.0
5 TraesCS5D01G246700 chr5B 87.692 195 24 0 151 345 418924376 418924182 1.780000e-55 228.0
6 TraesCS5D01G246700 chr5B 90.476 63 4 2 5228 5289 693877724 693877785 1.460000e-11 82.4
7 TraesCS5D01G246700 chr3D 93.814 2926 126 14 1948 4856 605094751 605097638 0.000000e+00 4349.0
8 TraesCS5D01G246700 chr3D 91.355 775 36 15 1147 1915 605084733 605085482 0.000000e+00 1031.0
9 TraesCS5D01G246700 chr3D 83.580 877 55 44 210 1054 605083893 605084712 0.000000e+00 739.0
10 TraesCS5D01G246700 chr5A 94.858 2042 69 9 1927 3957 455532500 455530484 0.000000e+00 3157.0
11 TraesCS5D01G246700 chr5A 93.681 1899 63 29 3953 5838 455530384 455528530 0.000000e+00 2789.0
12 TraesCS5D01G246700 chr5A 89.357 1945 83 49 1 1915 455534400 455532550 0.000000e+00 2331.0
13 TraesCS5D01G246700 chr5A 85.685 496 69 1 5835 6330 462831119 462830626 7.270000e-144 521.0
14 TraesCS5D01G246700 chr3A 92.844 1621 93 9 1927 3538 736678921 736680527 0.000000e+00 2329.0
15 TraesCS5D01G246700 chr3A 92.021 1504 95 13 2518 4011 736890068 736891556 0.000000e+00 2089.0
16 TraesCS5D01G246700 chr3A 93.235 1286 80 7 3573 4856 736680529 736681809 0.000000e+00 1886.0
17 TraesCS5D01G246700 chr3A 93.043 805 48 6 4054 4856 736891565 736892363 0.000000e+00 1170.0
18 TraesCS5D01G246700 chr3A 91.975 648 39 6 2518 3156 736875530 736876173 0.000000e+00 896.0
19 TraesCS5D01G246700 chr3A 92.322 547 42 0 1927 2473 736889524 736890070 0.000000e+00 778.0
20 TraesCS5D01G246700 chr3A 92.697 534 39 0 1927 2460 736874989 736875522 0.000000e+00 771.0
21 TraesCS5D01G246700 chr3A 90.634 363 29 4 1236 1595 736880064 736880424 1.600000e-130 477.0
22 TraesCS5D01G246700 chr3A 90.358 363 30 4 1236 1595 736865527 736865887 7.430000e-129 472.0
23 TraesCS5D01G246700 chr3A 92.683 328 20 3 2043 2370 303564954 303564631 2.670000e-128 470.0
24 TraesCS5D01G246700 chr3A 80.220 728 61 44 477 1179 736879407 736880076 2.670000e-128 470.0
25 TraesCS5D01G246700 chr3A 90.798 326 26 3 1592 1915 736889151 736889474 3.510000e-117 433.0
26 TraesCS5D01G246700 chr3A 89.571 326 31 2 1592 1915 736874615 736874939 1.640000e-110 411.0
27 TraesCS5D01G246700 chr3A 88.685 327 17 8 1592 1915 736678562 736678871 1.290000e-101 381.0
28 TraesCS5D01G246700 chr3A 86.604 321 31 8 320 635 736766323 736766636 1.690000e-90 344.0
29 TraesCS5D01G246700 chr3A 88.415 164 16 3 1010 1172 736865370 736865531 1.800000e-45 195.0
30 TraesCS5D01G246700 chr3A 82.143 112 15 2 65 173 33287332 33287223 2.430000e-14 91.6
31 TraesCS5D01G246700 chr3B 91.532 496 40 1 5839 6332 493088222 493087727 0.000000e+00 682.0
32 TraesCS5D01G246700 chr7D 88.889 495 53 2 5840 6332 163933526 163933032 5.430000e-170 608.0
33 TraesCS5D01G246700 chr7D 88.889 495 53 2 5840 6332 163968454 163967960 5.430000e-170 608.0
34 TraesCS5D01G246700 chr7D 88.664 494 54 2 5841 6332 106802853 106802360 9.080000e-168 601.0
35 TraesCS5D01G246700 chr7D 96.364 55 1 1 5234 5287 51550686 51550740 8.740000e-14 89.8
36 TraesCS5D01G246700 chr6D 89.195 472 49 2 5861 6332 443254536 443255005 7.070000e-164 588.0
37 TraesCS5D01G246700 chr6D 94.512 328 16 2 2043 2370 110866623 110866298 7.330000e-139 505.0
38 TraesCS5D01G246700 chr6D 90.625 64 5 1 5227 5290 18672139 18672077 4.070000e-12 84.2
39 TraesCS5D01G246700 chr2D 88.174 482 57 0 5851 6332 556315433 556314952 5.510000e-160 575.0
40 TraesCS5D01G246700 chr2D 85.312 320 24 13 2043 2362 110058837 110058541 6.170000e-80 309.0
41 TraesCS5D01G246700 chr2A 86.640 494 56 6 5840 6332 80854637 80855121 7.220000e-149 538.0
42 TraesCS5D01G246700 chr4A 83.527 431 69 2 5858 6287 32053605 32054034 9.890000e-108 401.0
43 TraesCS5D01G246700 chr4A 98.113 53 1 0 5238 5290 625758270 625758218 6.760000e-15 93.5
44 TraesCS5D01G246700 chr7A 98.113 53 1 0 5234 5286 61815970 61815918 6.760000e-15 93.5
45 TraesCS5D01G246700 chr7B 94.737 57 3 0 5233 5289 134634170 134634114 8.740000e-14 89.8
46 TraesCS5D01G246700 chr7B 92.063 63 4 1 5228 5290 4907356 4907417 3.140000e-13 87.9
47 TraesCS5D01G246700 chr6B 84.146 82 9 4 5228 5308 239733777 239733699 6.810000e-10 76.8
48 TraesCS5D01G246700 chr1D 84.127 63 7 3 140 201 466472557 466472617 2.470000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G246700 chr5D 354529328 354535659 6331 True 11694.0 11694 100.0000 1 6332 1 chr5D.!!$R1 6331
1 TraesCS5D01G246700 chr5B 418918314 418924376 6062 True 2032.0 6015 90.7770 151 5835 4 chr5B.!!$R1 5684
2 TraesCS5D01G246700 chr3D 605094751 605097638 2887 False 4349.0 4349 93.8140 1948 4856 1 chr3D.!!$F1 2908
3 TraesCS5D01G246700 chr3D 605083893 605085482 1589 False 885.0 1031 87.4675 210 1915 2 chr3D.!!$F2 1705
4 TraesCS5D01G246700 chr5A 455528530 455534400 5870 True 2759.0 3157 92.6320 1 5838 3 chr5A.!!$R2 5837
5 TraesCS5D01G246700 chr3A 736678562 736681809 3247 False 1532.0 2329 91.5880 1592 4856 3 chr3A.!!$F2 3264
6 TraesCS5D01G246700 chr3A 736889151 736892363 3212 False 1117.5 2089 92.0460 1592 4856 4 chr3A.!!$F5 3264
7 TraesCS5D01G246700 chr3A 736874615 736880424 5809 False 605.0 896 89.0194 477 3156 5 chr3A.!!$F4 2679
8 TraesCS5D01G246700 chr3A 736865370 736865887 517 False 333.5 472 89.3865 1010 1595 2 chr3A.!!$F3 585

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
745 1310 0.248215 CGCAACGCATTTCATCCCTC 60.248 55.000 0.00 0.0 0.00 4.30 F
950 1519 0.398381 CTTCCTGGGAGGAGGAGGAG 60.398 65.000 0.00 0.0 46.73 3.69 F
2184 2804 0.163788 CACGTGGTTGAGACAATCGC 59.836 55.000 7.95 0.0 0.00 4.58 F
3244 3884 1.069296 TGAAAATTCTTCTGCACCGCG 60.069 47.619 0.00 0.0 0.00 6.46 F
4415 6835 2.431419 CCATGCAGCCCATTTATGTTCA 59.569 45.455 0.00 0.0 29.71 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2150 2770 0.037605 ACGTGGCCTAGCACTACAAC 60.038 55.000 3.32 0.00 0.00 3.32 R
2345 2965 1.205655 TCAGCTGACTCCAGTATGCAC 59.794 52.381 13.74 0.00 42.35 4.57 R
3347 4009 2.414994 AGAAGCAGATCACACCATGG 57.585 50.000 11.19 11.19 0.00 3.66 R
4700 7217 0.389037 CTGAAGAGCTGCACTGCGTA 60.389 55.000 1.02 0.00 38.13 4.42 R
6180 8707 0.033366 TCGCAGCAGAAGCAACTACA 59.967 50.000 0.00 0.00 45.49 2.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
66 67 2.409055 GCACGCCTCCATCATTGCA 61.409 57.895 0.00 0.00 0.00 4.08
93 94 7.544217 ACACGGGTTTTATTGCAGAATTATTTC 59.456 33.333 0.00 0.00 0.00 2.17
178 179 3.498774 ACTGAGGTCTTGTTGCAGAAT 57.501 42.857 0.00 0.00 0.00 2.40
220 221 5.408880 TGTCGTAAAACATAGACCCATCA 57.591 39.130 0.00 0.00 33.04 3.07
261 262 9.682465 ATCATATATGTTTCAGAAGCATAGCAT 57.318 29.630 20.50 14.58 0.00 3.79
269 270 4.705554 CAGAAGCATAGCATCTGTTACG 57.294 45.455 14.14 0.00 45.50 3.18
314 315 2.030562 CGGGCCTCACTTGAACGT 59.969 61.111 0.84 0.00 0.00 3.99
338 339 2.971598 ATGCAGGGAAGGTGACGGG 61.972 63.158 0.00 0.00 0.00 5.28
340 341 3.636231 CAGGGAAGGTGACGGGCA 61.636 66.667 0.00 0.00 0.00 5.36
641 1161 4.020617 CACCTGGCCCGAGCAGAA 62.021 66.667 0.00 0.00 42.56 3.02
643 1163 2.273449 CCTGGCCCGAGCAGAAAT 59.727 61.111 0.00 0.00 42.56 2.17
644 1164 1.379044 CCTGGCCCGAGCAGAAATT 60.379 57.895 0.00 0.00 42.56 1.82
664 1226 2.863401 AACGGAAACAAAACAGAGCC 57.137 45.000 0.00 0.00 0.00 4.70
665 1227 0.661020 ACGGAAACAAAACAGAGCCG 59.339 50.000 0.00 0.00 42.64 5.52
666 1228 0.660300 CGGAAACAAAACAGAGCCGC 60.660 55.000 0.00 0.00 0.00 6.53
667 1229 0.383949 GGAAACAAAACAGAGCCGCA 59.616 50.000 0.00 0.00 0.00 5.69
668 1230 1.600413 GGAAACAAAACAGAGCCGCAG 60.600 52.381 0.00 0.00 0.00 5.18
689 1251 1.063174 GCTGGCACGAGATCAAATCAC 59.937 52.381 0.00 0.00 0.00 3.06
737 1300 3.186119 CCCATAAAATCGCAACGCATTT 58.814 40.909 0.00 0.00 0.00 2.32
738 1301 3.242712 CCCATAAAATCGCAACGCATTTC 59.757 43.478 0.00 0.00 0.00 2.17
739 1302 3.856521 CCATAAAATCGCAACGCATTTCA 59.143 39.130 0.00 0.00 0.00 2.69
740 1305 4.503734 CCATAAAATCGCAACGCATTTCAT 59.496 37.500 0.00 0.00 0.00 2.57
743 1308 0.381801 ATCGCAACGCATTTCATCCC 59.618 50.000 0.00 0.00 0.00 3.85
744 1309 0.676466 TCGCAACGCATTTCATCCCT 60.676 50.000 0.00 0.00 0.00 4.20
745 1310 0.248215 CGCAACGCATTTCATCCCTC 60.248 55.000 0.00 0.00 0.00 4.30
758 1323 2.319410 ATCCCTCTCCCTCCCTTCCG 62.319 65.000 0.00 0.00 0.00 4.30
763 1328 4.410033 TCCCTCCCTTCCGTCCCC 62.410 72.222 0.00 0.00 0.00 4.81
781 1346 3.930012 CCCTCGATCGCCCCCTTC 61.930 72.222 11.09 0.00 0.00 3.46
782 1347 3.930012 CCTCGATCGCCCCCTTCC 61.930 72.222 11.09 0.00 0.00 3.46
783 1348 4.286320 CTCGATCGCCCCCTTCCG 62.286 72.222 11.09 0.00 0.00 4.30
786 1351 3.793888 GATCGCCCCCTTCCGGTT 61.794 66.667 0.00 0.00 0.00 4.44
787 1352 3.335729 ATCGCCCCCTTCCGGTTT 61.336 61.111 0.00 0.00 0.00 3.27
800 1365 2.031465 GGTTTCCTTCCGCGTGGA 59.969 61.111 15.21 15.21 44.61 4.02
948 1517 1.706575 TCTTCCTGGGAGGAGGAGG 59.293 63.158 1.19 0.00 44.42 4.30
949 1518 0.855855 TCTTCCTGGGAGGAGGAGGA 60.856 60.000 1.19 0.00 44.42 3.71
950 1519 0.398381 CTTCCTGGGAGGAGGAGGAG 60.398 65.000 0.00 0.00 46.73 3.69
1204 1773 2.272146 CGGTACTGCATTGCCCCT 59.728 61.111 6.12 0.00 0.00 4.79
1363 1933 4.774726 AGTCTCCTGTACATGATTGACACT 59.225 41.667 17.08 6.97 0.00 3.55
1384 1954 4.202461 ACTCACCCAGCATGTTTTTCTCTA 60.202 41.667 0.00 0.00 0.00 2.43
1464 2037 1.140407 GCACGTAGGCTGCTAGTTCG 61.140 60.000 0.00 1.06 0.00 3.95
1466 2039 0.450983 ACGTAGGCTGCTAGTTCGTC 59.549 55.000 0.00 0.00 0.00 4.20
1915 2496 5.247507 TGTTGATGTCAAGTTTCCAGTTG 57.752 39.130 0.00 0.00 36.39 3.16
1916 2497 4.097741 TGTTGATGTCAAGTTTCCAGTTGG 59.902 41.667 0.00 0.00 36.39 3.77
1921 2502 4.277476 TGTCAAGTTTCCAGTTGGTTGAT 58.723 39.130 5.54 0.00 34.45 2.57
1922 2503 4.338118 TGTCAAGTTTCCAGTTGGTTGATC 59.662 41.667 5.54 0.00 34.45 2.92
1923 2504 3.563808 TCAAGTTTCCAGTTGGTTGATCG 59.436 43.478 0.00 0.00 34.45 3.69
1925 2506 3.403038 AGTTTCCAGTTGGTTGATCGAG 58.597 45.455 0.00 0.00 36.34 4.04
1960 2579 7.467403 GCTGTTACTGTTTATTTAGGCCATCTC 60.467 40.741 5.01 0.00 0.00 2.75
1967 2586 3.627395 ATTTAGGCCATCTCGTGAACA 57.373 42.857 5.01 0.00 0.00 3.18
1972 2591 1.009829 GCCATCTCGTGAACATGGAC 58.990 55.000 9.26 0.00 39.73 4.02
2150 2770 9.388506 ACACCATCAGATATTTTCTTCAGTTAG 57.611 33.333 0.00 0.00 29.93 2.34
2166 2786 3.056107 CAGTTAGTTGTAGTGCTAGGCCA 60.056 47.826 5.01 0.00 0.00 5.36
2184 2804 0.163788 CACGTGGTTGAGACAATCGC 59.836 55.000 7.95 0.00 0.00 4.58
2229 2849 3.622514 ACCTCGAGTGATGCCTCC 58.377 61.111 12.31 0.00 0.00 4.30
2248 2868 5.654209 GCCTCCCTTTTATCTTCTGAAACAT 59.346 40.000 0.00 0.00 0.00 2.71
2345 2965 1.131126 GCATCAGTTGGTGATTCACGG 59.869 52.381 10.56 0.00 44.05 4.94
2354 2974 1.665679 GGTGATTCACGGTGCATACTG 59.334 52.381 10.56 0.00 39.18 2.74
2412 3032 2.542020 TCATCGCTTTGACTCCAACA 57.458 45.000 0.00 0.00 30.88 3.33
2677 3297 4.373156 ACCTGCTAACCATCTGTTTCTT 57.627 40.909 0.00 0.00 38.42 2.52
2678 3298 5.499004 ACCTGCTAACCATCTGTTTCTTA 57.501 39.130 0.00 0.00 38.42 2.10
2679 3299 5.876357 ACCTGCTAACCATCTGTTTCTTAA 58.124 37.500 0.00 0.00 38.42 1.85
2751 3374 6.664428 ATTAAGTGCCTACCAAACAATGTT 57.336 33.333 0.00 0.00 0.00 2.71
2765 3398 4.685169 ACAATGTTTTAGCGATGGACTG 57.315 40.909 0.00 0.00 0.00 3.51
2874 3507 5.690865 TGTTGTTCCCTCTCTGTATTTTGT 58.309 37.500 0.00 0.00 0.00 2.83
3152 3792 4.051922 GTGGTTTGTGCCTATCTAGATCG 58.948 47.826 8.95 2.47 0.00 3.69
3244 3884 1.069296 TGAAAATTCTTCTGCACCGCG 60.069 47.619 0.00 0.00 0.00 6.46
4106 5944 9.817365 CGAATGCTCAGGTAAATCATATTTTAG 57.183 33.333 0.00 0.00 0.00 1.85
4167 6005 4.082571 AGTTTTCTCGATTTGATGGCCTTG 60.083 41.667 3.32 0.00 0.00 3.61
4275 6113 5.012664 TGGATTTGTAGCTTCTCCAGTTACA 59.987 40.000 0.00 0.00 44.90 2.41
4310 6148 4.178171 TTGATTGTCTCATACGGGCAACC 61.178 47.826 0.00 0.00 44.02 3.77
4415 6835 2.431419 CCATGCAGCCCATTTATGTTCA 59.569 45.455 0.00 0.00 29.71 3.18
4476 6896 6.552008 TGTTTCCTTTTCCAATCTCCACTAT 58.448 36.000 0.00 0.00 0.00 2.12
4506 6926 4.512484 CCTCTTCTTTTCTCTGGTCATCC 58.488 47.826 0.00 0.00 0.00 3.51
5178 7696 5.781210 AACGATCTCATCAGCTATCTTGA 57.219 39.130 0.00 0.00 0.00 3.02
5222 7740 5.179368 TGCCTTTTCTCGAAGAAATACACAG 59.821 40.000 9.75 5.50 43.06 3.66
5256 7774 9.778741 ATCACTGAAGTTAGTACAAAATTGAGA 57.221 29.630 0.00 0.00 0.00 3.27
5257 7775 9.042008 TCACTGAAGTTAGTACAAAATTGAGAC 57.958 33.333 0.00 0.00 0.00 3.36
5258 7776 8.826710 CACTGAAGTTAGTACAAAATTGAGACA 58.173 33.333 0.00 0.00 0.00 3.41
5259 7777 8.827677 ACTGAAGTTAGTACAAAATTGAGACAC 58.172 33.333 0.00 0.00 0.00 3.67
5260 7778 8.958119 TGAAGTTAGTACAAAATTGAGACACT 57.042 30.769 0.00 1.09 0.00 3.55
5261 7779 9.391006 TGAAGTTAGTACAAAATTGAGACACTT 57.609 29.630 0.00 4.83 0.00 3.16
5268 7786 9.965824 AGTACAAAATTGAGACACTTATTTTGG 57.034 29.630 21.75 9.08 45.43 3.28
5269 7787 9.191995 GTACAAAATTGAGACACTTATTTTGGG 57.808 33.333 21.75 10.11 45.43 4.12
5270 7788 8.017418 ACAAAATTGAGACACTTATTTTGGGA 57.983 30.769 21.75 0.00 45.43 4.37
5271 7789 7.926018 ACAAAATTGAGACACTTATTTTGGGAC 59.074 33.333 21.75 0.00 45.43 4.46
5272 7790 5.880054 ATTGAGACACTTATTTTGGGACG 57.120 39.130 0.00 0.00 0.00 4.79
5273 7791 3.670625 TGAGACACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 0.00 4.79
5274 7792 3.325425 TGAGACACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 0.00 4.69
5275 7793 3.933332 GAGACACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 0.00 4.63
5276 7794 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
5277 7795 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
5278 7796 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
5279 7797 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
5318 7837 9.019656 TGCTAATTTGCTCTTTGGTTCTATTTA 57.980 29.630 12.99 0.00 0.00 1.40
5358 7877 1.354040 CAGATGCCTTCAGTCACGTC 58.646 55.000 0.00 0.00 0.00 4.34
5523 8043 5.420104 AGGTTGGAAATTCATTGATCAGTCC 59.580 40.000 0.00 0.00 0.00 3.85
5559 8079 2.749280 GGCACCCTTTTCAAATGAGG 57.251 50.000 0.00 0.00 0.00 3.86
5676 8196 8.934825 TGAGAAAAAGAAAAAGTTTGGTGATTG 58.065 29.630 0.00 0.00 0.00 2.67
5794 8314 9.912634 ATGTGAAGTAGTTTTAACATTTGATGG 57.087 29.630 0.00 0.00 33.60 3.51
5827 8354 1.033746 ACATGCGAGGAAATGGCCAG 61.034 55.000 13.05 0.00 0.00 4.85
5830 8357 2.677228 CGAGGAAATGGCCAGGGT 59.323 61.111 13.05 0.00 0.00 4.34
5834 8361 2.815158 GAGGAAATGGCCAGGGTTTTA 58.185 47.619 13.05 0.00 0.00 1.52
5835 8362 3.374764 GAGGAAATGGCCAGGGTTTTAT 58.625 45.455 13.05 0.00 0.00 1.40
5836 8363 4.542697 GAGGAAATGGCCAGGGTTTTATA 58.457 43.478 13.05 0.00 0.00 0.98
5837 8364 4.286707 AGGAAATGGCCAGGGTTTTATAC 58.713 43.478 13.05 1.28 0.00 1.47
5838 8365 3.067601 GGAAATGGCCAGGGTTTTATACG 59.932 47.826 13.05 0.00 0.00 3.06
5839 8366 3.375647 AATGGCCAGGGTTTTATACGT 57.624 42.857 13.05 0.00 0.00 3.57
5840 8367 2.883122 TGGCCAGGGTTTTATACGTT 57.117 45.000 0.00 0.00 0.00 3.99
5841 8368 3.157750 TGGCCAGGGTTTTATACGTTT 57.842 42.857 0.00 0.00 0.00 3.60
5842 8369 3.498334 TGGCCAGGGTTTTATACGTTTT 58.502 40.909 0.00 0.00 0.00 2.43
5843 8370 3.896272 TGGCCAGGGTTTTATACGTTTTT 59.104 39.130 0.00 0.00 0.00 1.94
5871 8398 9.796120 TTAAATCAACCGCTCCTTTATTAATTG 57.204 29.630 0.00 0.00 0.00 2.32
5872 8399 5.828299 TCAACCGCTCCTTTATTAATTGG 57.172 39.130 0.00 0.00 0.00 3.16
5873 8400 4.097286 TCAACCGCTCCTTTATTAATTGGC 59.903 41.667 0.00 0.00 0.00 4.52
5874 8401 3.898482 ACCGCTCCTTTATTAATTGGCT 58.102 40.909 0.00 0.00 0.00 4.75
5875 8402 5.043737 ACCGCTCCTTTATTAATTGGCTA 57.956 39.130 0.00 0.00 0.00 3.93
5876 8403 4.820173 ACCGCTCCTTTATTAATTGGCTAC 59.180 41.667 0.00 0.00 0.00 3.58
5877 8404 4.819630 CCGCTCCTTTATTAATTGGCTACA 59.180 41.667 0.00 0.00 0.00 2.74
5878 8405 5.298276 CCGCTCCTTTATTAATTGGCTACAA 59.702 40.000 0.00 0.00 41.59 2.41
5897 8424 7.783090 CTACAATTGTAGCATCAGAGACAAT 57.217 36.000 27.90 0.00 42.76 2.71
5898 8425 8.877808 CTACAATTGTAGCATCAGAGACAATA 57.122 34.615 27.90 0.00 40.68 1.90
5899 8426 9.317936 CTACAATTGTAGCATCAGAGACAATAA 57.682 33.333 27.90 0.00 40.68 1.40
5900 8427 8.206325 ACAATTGTAGCATCAGAGACAATAAG 57.794 34.615 9.97 0.00 40.68 1.73
5901 8428 8.043113 ACAATTGTAGCATCAGAGACAATAAGA 58.957 33.333 9.97 0.00 40.68 2.10
5902 8429 8.549548 CAATTGTAGCATCAGAGACAATAAGAG 58.450 37.037 0.00 0.00 40.68 2.85
5903 8430 6.154203 TGTAGCATCAGAGACAATAAGAGG 57.846 41.667 0.00 0.00 0.00 3.69
5904 8431 5.893824 TGTAGCATCAGAGACAATAAGAGGA 59.106 40.000 0.00 0.00 0.00 3.71
5905 8432 5.946942 AGCATCAGAGACAATAAGAGGAA 57.053 39.130 0.00 0.00 0.00 3.36
5906 8433 6.497624 AGCATCAGAGACAATAAGAGGAAT 57.502 37.500 0.00 0.00 0.00 3.01
5907 8434 7.609097 AGCATCAGAGACAATAAGAGGAATA 57.391 36.000 0.00 0.00 0.00 1.75
5908 8435 8.027524 AGCATCAGAGACAATAAGAGGAATAA 57.972 34.615 0.00 0.00 0.00 1.40
5909 8436 7.930865 AGCATCAGAGACAATAAGAGGAATAAC 59.069 37.037 0.00 0.00 0.00 1.89
5910 8437 7.712639 GCATCAGAGACAATAAGAGGAATAACA 59.287 37.037 0.00 0.00 0.00 2.41
5911 8438 9.258826 CATCAGAGACAATAAGAGGAATAACAG 57.741 37.037 0.00 0.00 0.00 3.16
5912 8439 7.268586 TCAGAGACAATAAGAGGAATAACAGC 58.731 38.462 0.00 0.00 0.00 4.40
5913 8440 6.481644 CAGAGACAATAAGAGGAATAACAGCC 59.518 42.308 0.00 0.00 0.00 4.85
5914 8441 6.156949 AGAGACAATAAGAGGAATAACAGCCA 59.843 38.462 0.00 0.00 0.00 4.75
5915 8442 6.904626 AGACAATAAGAGGAATAACAGCCAT 58.095 36.000 0.00 0.00 0.00 4.40
5916 8443 6.995091 AGACAATAAGAGGAATAACAGCCATC 59.005 38.462 0.00 0.00 0.00 3.51
5917 8444 5.760253 ACAATAAGAGGAATAACAGCCATCG 59.240 40.000 0.00 0.00 0.00 3.84
5918 8445 2.918712 AGAGGAATAACAGCCATCGG 57.081 50.000 0.00 0.00 0.00 4.18
5919 8446 1.417890 AGAGGAATAACAGCCATCGGG 59.582 52.381 0.00 0.00 37.18 5.14
5920 8447 0.474184 AGGAATAACAGCCATCGGGG 59.526 55.000 0.00 0.00 40.85 5.73
5929 8456 4.193893 CCATCGGGGCTGCATCCA 62.194 66.667 9.17 0.00 0.00 3.41
5930 8457 2.114625 CATCGGGGCTGCATCCAT 59.885 61.111 9.17 0.00 0.00 3.41
5931 8458 1.970114 CATCGGGGCTGCATCCATC 60.970 63.158 9.17 0.00 0.00 3.51
5932 8459 3.201707 ATCGGGGCTGCATCCATCC 62.202 63.158 9.17 0.13 0.00 3.51
5933 8460 4.193893 CGGGGCTGCATCCATCCA 62.194 66.667 9.17 0.00 0.00 3.41
5934 8461 2.524559 GGGGCTGCATCCATCCAT 59.475 61.111 9.17 0.00 0.00 3.41
5935 8462 1.769665 GGGGCTGCATCCATCCATA 59.230 57.895 9.17 0.00 0.00 2.74
5936 8463 0.610232 GGGGCTGCATCCATCCATAC 60.610 60.000 9.17 0.00 0.00 2.39
5937 8464 0.111061 GGGCTGCATCCATCCATACA 59.889 55.000 9.17 0.00 0.00 2.29
5938 8465 1.272313 GGGCTGCATCCATCCATACAT 60.272 52.381 9.17 0.00 0.00 2.29
5939 8466 2.089980 GGCTGCATCCATCCATACATC 58.910 52.381 0.55 0.00 0.00 3.06
5940 8467 2.553685 GGCTGCATCCATCCATACATCA 60.554 50.000 0.55 0.00 0.00 3.07
5941 8468 2.747989 GCTGCATCCATCCATACATCAG 59.252 50.000 0.00 0.00 0.00 2.90
5942 8469 3.344515 CTGCATCCATCCATACATCAGG 58.655 50.000 0.00 0.00 0.00 3.86
5943 8470 2.981081 TGCATCCATCCATACATCAGGA 59.019 45.455 0.00 0.00 38.50 3.86
5944 8471 3.008704 TGCATCCATCCATACATCAGGAG 59.991 47.826 0.00 0.00 37.34 3.69
5945 8472 3.008813 GCATCCATCCATACATCAGGAGT 59.991 47.826 0.00 0.00 37.34 3.85
5946 8473 4.576879 CATCCATCCATACATCAGGAGTG 58.423 47.826 0.00 0.00 37.34 3.51
5947 8474 2.974794 TCCATCCATACATCAGGAGTGG 59.025 50.000 0.00 0.00 37.34 4.00
5948 8475 2.707791 CCATCCATACATCAGGAGTGGT 59.292 50.000 0.00 0.00 37.34 4.16
5949 8476 3.495629 CCATCCATACATCAGGAGTGGTG 60.496 52.174 0.00 0.00 41.05 4.17
5950 8477 3.114643 TCCATACATCAGGAGTGGTGA 57.885 47.619 0.00 0.00 36.87 4.02
5951 8478 3.449918 TCCATACATCAGGAGTGGTGAA 58.550 45.455 0.00 0.00 36.87 3.18
5952 8479 4.040047 TCCATACATCAGGAGTGGTGAAT 58.960 43.478 0.00 0.00 36.87 2.57
5953 8480 4.101585 TCCATACATCAGGAGTGGTGAATC 59.898 45.833 0.00 0.00 36.87 2.52
5954 8481 4.102210 CCATACATCAGGAGTGGTGAATCT 59.898 45.833 0.00 0.00 36.87 2.40
5960 8487 4.211125 TCAGGAGTGGTGAATCTAGCTAG 58.789 47.826 15.01 15.01 0.00 3.42
5962 8489 4.037446 CAGGAGTGGTGAATCTAGCTAGTC 59.963 50.000 20.10 11.96 0.00 2.59
5963 8490 4.079443 AGGAGTGGTGAATCTAGCTAGTCT 60.079 45.833 20.10 8.69 0.00 3.24
5964 8491 5.132985 AGGAGTGGTGAATCTAGCTAGTCTA 59.867 44.000 20.10 1.66 0.00 2.59
5981 8508 3.318557 AGTCTAGCTAATTCGTGGGCTAC 59.681 47.826 0.00 0.00 36.40 3.58
5984 8511 3.629142 AGCTAATTCGTGGGCTACTTT 57.371 42.857 0.00 0.00 32.94 2.66
5986 8513 5.291905 AGCTAATTCGTGGGCTACTTTAT 57.708 39.130 0.00 0.00 32.94 1.40
5988 8515 5.527582 AGCTAATTCGTGGGCTACTTTATTG 59.472 40.000 0.00 0.00 32.94 1.90
5990 8517 6.183360 GCTAATTCGTGGGCTACTTTATTGTT 60.183 38.462 0.00 0.00 0.00 2.83
5991 8518 5.813080 ATTCGTGGGCTACTTTATTGTTC 57.187 39.130 0.00 0.00 0.00 3.18
5992 8519 4.546829 TCGTGGGCTACTTTATTGTTCT 57.453 40.909 0.00 0.00 0.00 3.01
5993 8520 4.501071 TCGTGGGCTACTTTATTGTTCTC 58.499 43.478 0.00 0.00 0.00 2.87
5994 8521 4.222145 TCGTGGGCTACTTTATTGTTCTCT 59.778 41.667 0.00 0.00 0.00 3.10
5997 8524 6.405508 CGTGGGCTACTTTATTGTTCTCTCTA 60.406 42.308 0.00 0.00 0.00 2.43
5998 8525 7.501844 GTGGGCTACTTTATTGTTCTCTCTAT 58.498 38.462 0.00 0.00 0.00 1.98
5999 8526 8.639761 GTGGGCTACTTTATTGTTCTCTCTATA 58.360 37.037 0.00 0.00 0.00 1.31
6000 8527 9.209048 TGGGCTACTTTATTGTTCTCTCTATAA 57.791 33.333 0.00 0.00 0.00 0.98
6057 8584 9.778993 AAAGACATGAAATAACAATCATCGAAG 57.221 29.630 0.00 0.00 34.12 3.79
6058 8585 8.722480 AGACATGAAATAACAATCATCGAAGA 57.278 30.769 0.00 0.00 45.75 2.87
6059 8586 9.334947 AGACATGAAATAACAATCATCGAAGAT 57.665 29.630 0.00 0.00 45.12 2.40
6062 8589 6.649436 TGAAATAACAATCATCGAAGATCGC 58.351 36.000 3.23 0.00 45.12 4.58
6065 8592 1.135046 CAATCATCGAAGATCGCGCT 58.865 50.000 5.56 0.00 45.12 5.92
6080 8607 2.268920 GCTGGCCACCGAAGATGA 59.731 61.111 0.00 0.00 0.00 2.92
6081 8608 1.817099 GCTGGCCACCGAAGATGAG 60.817 63.158 0.00 0.00 0.00 2.90
6082 8609 1.599047 CTGGCCACCGAAGATGAGT 59.401 57.895 0.00 0.00 0.00 3.41
6083 8610 0.824109 CTGGCCACCGAAGATGAGTA 59.176 55.000 0.00 0.00 0.00 2.59
6084 8611 1.414181 CTGGCCACCGAAGATGAGTAT 59.586 52.381 0.00 0.00 0.00 2.12
6085 8612 1.412710 TGGCCACCGAAGATGAGTATC 59.587 52.381 0.00 0.00 0.00 2.24
6086 8613 1.270358 GGCCACCGAAGATGAGTATCC 60.270 57.143 0.00 0.00 33.64 2.59
6087 8614 1.270358 GCCACCGAAGATGAGTATCCC 60.270 57.143 0.00 0.00 33.64 3.85
6088 8615 2.320781 CCACCGAAGATGAGTATCCCT 58.679 52.381 0.00 0.00 33.64 4.20
6090 8617 3.226777 CACCGAAGATGAGTATCCCTCT 58.773 50.000 0.00 0.00 41.11 3.69
6091 8618 3.639094 CACCGAAGATGAGTATCCCTCTT 59.361 47.826 0.00 0.00 41.11 2.85
6092 8619 4.100189 CACCGAAGATGAGTATCCCTCTTT 59.900 45.833 0.00 0.00 41.11 2.52
6093 8620 4.100189 ACCGAAGATGAGTATCCCTCTTTG 59.900 45.833 0.00 0.00 41.11 2.77
6094 8621 4.342378 CCGAAGATGAGTATCCCTCTTTGA 59.658 45.833 0.00 0.00 38.54 2.69
6095 8622 5.508825 CCGAAGATGAGTATCCCTCTTTGAG 60.509 48.000 0.00 0.00 38.54 3.02
6096 8623 5.068460 CGAAGATGAGTATCCCTCTTTGAGT 59.932 44.000 0.00 0.00 38.54 3.41
6097 8624 5.867903 AGATGAGTATCCCTCTTTGAGTG 57.132 43.478 0.00 0.00 41.11 3.51
6099 8626 3.445008 TGAGTATCCCTCTTTGAGTGCT 58.555 45.455 0.00 0.00 41.11 4.40
6100 8627 3.196469 TGAGTATCCCTCTTTGAGTGCTG 59.804 47.826 0.00 0.00 41.11 4.41
6101 8628 3.445008 AGTATCCCTCTTTGAGTGCTGA 58.555 45.455 0.00 0.00 0.00 4.26
6102 8629 3.840666 AGTATCCCTCTTTGAGTGCTGAA 59.159 43.478 0.00 0.00 0.00 3.02
6103 8630 3.795688 ATCCCTCTTTGAGTGCTGAAA 57.204 42.857 0.00 0.00 0.00 2.69
6104 8631 3.795688 TCCCTCTTTGAGTGCTGAAAT 57.204 42.857 0.00 0.00 0.00 2.17
6105 8632 3.679389 TCCCTCTTTGAGTGCTGAAATC 58.321 45.455 0.00 0.00 0.00 2.17
6106 8633 3.072915 TCCCTCTTTGAGTGCTGAAATCA 59.927 43.478 0.00 0.00 0.00 2.57
6109 8636 4.458295 CCTCTTTGAGTGCTGAAATCACAT 59.542 41.667 0.00 0.00 36.93 3.21
6110 8637 5.391736 CCTCTTTGAGTGCTGAAATCACATC 60.392 44.000 0.00 0.00 36.93 3.06
6116 8643 1.089920 GCTGAAATCACATCCACGCT 58.910 50.000 0.00 0.00 0.00 5.07
6117 8644 2.279741 GCTGAAATCACATCCACGCTA 58.720 47.619 0.00 0.00 0.00 4.26
6118 8645 2.874701 GCTGAAATCACATCCACGCTAT 59.125 45.455 0.00 0.00 0.00 2.97
6120 8647 4.375272 CTGAAATCACATCCACGCTATCT 58.625 43.478 0.00 0.00 0.00 1.98
6122 8649 4.141959 TGAAATCACATCCACGCTATCTGA 60.142 41.667 0.00 0.00 0.00 3.27
6123 8650 4.406648 AATCACATCCACGCTATCTGAA 57.593 40.909 0.00 0.00 0.00 3.02
6124 8651 4.613925 ATCACATCCACGCTATCTGAAT 57.386 40.909 0.00 0.00 0.00 2.57
6125 8652 4.406648 TCACATCCACGCTATCTGAATT 57.593 40.909 0.00 0.00 0.00 2.17
6127 8654 5.912892 TCACATCCACGCTATCTGAATTTA 58.087 37.500 0.00 0.00 0.00 1.40
6129 8656 5.755375 CACATCCACGCTATCTGAATTTACT 59.245 40.000 0.00 0.00 0.00 2.24
6130 8657 6.258727 CACATCCACGCTATCTGAATTTACTT 59.741 38.462 0.00 0.00 0.00 2.24
6131 8658 6.480320 ACATCCACGCTATCTGAATTTACTTC 59.520 38.462 0.00 0.00 0.00 3.01
6132 8659 5.972935 TCCACGCTATCTGAATTTACTTCA 58.027 37.500 0.00 0.00 41.61 3.02
6133 8660 6.403049 TCCACGCTATCTGAATTTACTTCAA 58.597 36.000 0.00 0.00 43.20 2.69
6135 8662 7.552687 TCCACGCTATCTGAATTTACTTCAATT 59.447 33.333 0.00 0.00 43.20 2.32
6136 8663 8.184192 CCACGCTATCTGAATTTACTTCAATTT 58.816 33.333 0.00 0.00 43.20 1.82
6137 8664 9.559958 CACGCTATCTGAATTTACTTCAATTTT 57.440 29.630 0.00 0.00 43.20 1.82
6138 8665 9.559958 ACGCTATCTGAATTTACTTCAATTTTG 57.440 29.630 0.00 0.00 43.20 2.44
6140 8667 9.578439 GCTATCTGAATTTACTTCAATTTTGCT 57.422 29.630 0.00 0.00 43.20 3.91
6143 8670 7.208777 TCTGAATTTACTTCAATTTTGCTGCA 58.791 30.769 0.00 0.00 43.20 4.41
6144 8671 7.169645 TCTGAATTTACTTCAATTTTGCTGCAC 59.830 33.333 0.00 0.00 43.20 4.57
6145 8672 6.202570 TGAATTTACTTCAATTTTGCTGCACC 59.797 34.615 0.00 0.00 40.92 5.01
6146 8673 2.531522 ACTTCAATTTTGCTGCACCC 57.468 45.000 0.00 0.00 0.00 4.61
6147 8674 1.761784 ACTTCAATTTTGCTGCACCCA 59.238 42.857 0.00 0.00 0.00 4.51
6148 8675 2.224113 ACTTCAATTTTGCTGCACCCAG 60.224 45.455 0.00 0.00 42.13 4.45
6167 8694 2.047655 TGTGCGGGCGAGGTTTAG 60.048 61.111 0.00 0.00 0.00 1.85
6168 8695 2.818274 GTGCGGGCGAGGTTTAGG 60.818 66.667 0.00 0.00 0.00 2.69
6174 8701 1.880894 GGCGAGGTTTAGGCCAAAC 59.119 57.895 17.47 17.47 46.13 2.93
6188 8715 2.228103 GGCCAAACCTAACTGTAGTTGC 59.772 50.000 0.00 0.79 38.90 4.17
6189 8716 3.146847 GCCAAACCTAACTGTAGTTGCT 58.853 45.455 7.50 0.00 38.90 3.91
6190 8717 3.568430 GCCAAACCTAACTGTAGTTGCTT 59.432 43.478 7.50 0.00 38.90 3.91
6191 8718 4.320275 GCCAAACCTAACTGTAGTTGCTTC 60.320 45.833 7.50 0.00 38.90 3.86
6192 8719 5.063880 CCAAACCTAACTGTAGTTGCTTCT 58.936 41.667 7.50 0.00 38.90 2.85
6193 8720 5.049405 CCAAACCTAACTGTAGTTGCTTCTG 60.049 44.000 7.50 0.71 38.90 3.02
6194 8721 3.665190 ACCTAACTGTAGTTGCTTCTGC 58.335 45.455 7.50 0.00 38.90 4.26
6195 8722 3.325135 ACCTAACTGTAGTTGCTTCTGCT 59.675 43.478 7.50 0.00 38.90 4.24
6196 8723 3.681897 CCTAACTGTAGTTGCTTCTGCTG 59.318 47.826 7.50 0.00 38.90 4.41
6197 8724 1.517242 ACTGTAGTTGCTTCTGCTGC 58.483 50.000 0.00 0.00 40.48 5.25
6198 8725 0.441533 CTGTAGTTGCTTCTGCTGCG 59.558 55.000 0.00 0.00 40.48 5.18
6202 8729 0.590195 AGTTGCTTCTGCTGCGAAAG 59.410 50.000 8.87 8.87 40.48 2.62
6219 8746 5.413969 CGAAAGCATCATAGCAGATTTCA 57.586 39.130 0.00 0.00 36.85 2.69
6221 8748 5.907945 CGAAAGCATCATAGCAGATTTCAAG 59.092 40.000 0.00 0.00 36.85 3.02
6222 8749 6.457934 CGAAAGCATCATAGCAGATTTCAAGT 60.458 38.462 0.00 0.00 36.85 3.16
6225 8752 7.166691 AGCATCATAGCAGATTTCAAGTTTT 57.833 32.000 0.00 0.00 36.85 2.43
6227 8754 7.758528 AGCATCATAGCAGATTTCAAGTTTTTC 59.241 33.333 0.00 0.00 36.85 2.29
6229 8756 9.582431 CATCATAGCAGATTTCAAGTTTTTCAT 57.418 29.630 0.00 0.00 0.00 2.57
6231 8758 9.630098 TCATAGCAGATTTCAAGTTTTTCATTC 57.370 29.630 0.00 0.00 0.00 2.67
6232 8759 6.998258 AGCAGATTTCAAGTTTTTCATTCG 57.002 33.333 0.00 0.00 0.00 3.34
6233 8760 5.922544 AGCAGATTTCAAGTTTTTCATTCGG 59.077 36.000 0.00 0.00 0.00 4.30
6234 8761 5.119125 GCAGATTTCAAGTTTTTCATTCGGG 59.881 40.000 0.00 0.00 0.00 5.14
6235 8762 5.634859 CAGATTTCAAGTTTTTCATTCGGGG 59.365 40.000 0.00 0.00 0.00 5.73
6236 8763 3.378911 TTCAAGTTTTTCATTCGGGGC 57.621 42.857 0.00 0.00 0.00 5.80
6237 8764 2.311463 TCAAGTTTTTCATTCGGGGCA 58.689 42.857 0.00 0.00 0.00 5.36
6241 8768 0.891449 TTTTTCATTCGGGGCAGCGA 60.891 50.000 0.00 0.00 0.00 4.93
6242 8769 0.679640 TTTTCATTCGGGGCAGCGAT 60.680 50.000 0.00 0.00 0.00 4.58
6243 8770 1.375853 TTTCATTCGGGGCAGCGATG 61.376 55.000 0.00 0.00 0.00 3.84
6244 8771 2.203056 CATTCGGGGCAGCGATGA 60.203 61.111 4.02 0.00 0.00 2.92
6245 8772 1.819208 CATTCGGGGCAGCGATGAA 60.819 57.895 4.02 0.00 0.00 2.57
6246 8773 1.819632 ATTCGGGGCAGCGATGAAC 60.820 57.895 4.02 0.00 0.00 3.18
6247 8774 2.257409 ATTCGGGGCAGCGATGAACT 62.257 55.000 4.02 0.00 0.00 3.01
6248 8775 2.436646 CGGGGCAGCGATGAACTT 60.437 61.111 4.02 0.00 0.00 2.66
6249 8776 1.153449 CGGGGCAGCGATGAACTTA 60.153 57.895 4.02 0.00 0.00 2.24
6251 8778 1.095807 GGGGCAGCGATGAACTTACC 61.096 60.000 4.02 0.00 0.00 2.85
6252 8779 1.429148 GGGCAGCGATGAACTTACCG 61.429 60.000 4.02 0.00 0.00 4.02
6254 8781 1.076332 GCAGCGATGAACTTACCGTT 58.924 50.000 4.02 0.00 38.91 4.44
6255 8782 1.201921 GCAGCGATGAACTTACCGTTG 60.202 52.381 4.02 0.00 35.56 4.10
6256 8783 2.066262 CAGCGATGAACTTACCGTTGT 58.934 47.619 0.00 0.00 35.56 3.32
6257 8784 2.066262 AGCGATGAACTTACCGTTGTG 58.934 47.619 0.00 0.00 35.56 3.33
6258 8785 1.127951 GCGATGAACTTACCGTTGTGG 59.872 52.381 0.00 0.00 46.41 4.17
6269 8796 1.714794 CCGTTGTGGTCTCTGATGAC 58.285 55.000 0.00 0.00 36.31 3.06
6270 8797 1.000843 CCGTTGTGGTCTCTGATGACA 59.999 52.381 8.71 0.00 38.61 3.58
6272 8799 2.072298 GTTGTGGTCTCTGATGACAGC 58.928 52.381 8.71 0.00 43.17 4.40
6273 8800 1.341080 TGTGGTCTCTGATGACAGCA 58.659 50.000 0.00 0.00 43.17 4.41
6277 8804 2.103373 GGTCTCTGATGACAGCACCTA 58.897 52.381 0.00 0.00 43.17 3.08
6278 8805 2.159170 GGTCTCTGATGACAGCACCTAC 60.159 54.545 0.00 0.00 43.17 3.18
6279 8806 2.493675 GTCTCTGATGACAGCACCTACA 59.506 50.000 0.00 0.00 43.17 2.74
6280 8807 2.757314 TCTCTGATGACAGCACCTACAG 59.243 50.000 0.00 0.00 43.17 2.74
6281 8808 2.757314 CTCTGATGACAGCACCTACAGA 59.243 50.000 0.00 0.00 43.17 3.41
6282 8809 2.757314 TCTGATGACAGCACCTACAGAG 59.243 50.000 0.00 0.00 43.17 3.35
6283 8810 1.205655 TGATGACAGCACCTACAGAGC 59.794 52.381 0.00 0.00 0.00 4.09
6285 8812 0.542938 TGACAGCACCTACAGAGCCT 60.543 55.000 0.00 0.00 0.00 4.58
6286 8813 0.610687 GACAGCACCTACAGAGCCTT 59.389 55.000 0.00 0.00 0.00 4.35
6288 8815 2.233922 GACAGCACCTACAGAGCCTTTA 59.766 50.000 0.00 0.00 0.00 1.85
6289 8816 2.637872 ACAGCACCTACAGAGCCTTTAA 59.362 45.455 0.00 0.00 0.00 1.52
6290 8817 3.265791 CAGCACCTACAGAGCCTTTAAG 58.734 50.000 0.00 0.00 0.00 1.85
6292 8819 3.003480 GCACCTACAGAGCCTTTAAGTG 58.997 50.000 0.00 0.00 0.00 3.16
6293 8820 3.306780 GCACCTACAGAGCCTTTAAGTGA 60.307 47.826 0.00 0.00 0.00 3.41
6294 8821 4.499183 CACCTACAGAGCCTTTAAGTGAG 58.501 47.826 0.00 0.00 0.00 3.51
6295 8822 4.021016 CACCTACAGAGCCTTTAAGTGAGT 60.021 45.833 0.00 0.00 0.00 3.41
6297 8824 4.220821 CCTACAGAGCCTTTAAGTGAGTCA 59.779 45.833 0.00 0.00 0.00 3.41
6298 8825 4.899352 ACAGAGCCTTTAAGTGAGTCAT 57.101 40.909 0.00 0.00 0.00 3.06
6299 8826 4.573900 ACAGAGCCTTTAAGTGAGTCATG 58.426 43.478 0.00 0.00 0.00 3.07
6300 8827 3.937706 CAGAGCCTTTAAGTGAGTCATGG 59.062 47.826 0.00 0.00 0.00 3.66
6301 8828 3.584848 AGAGCCTTTAAGTGAGTCATGGT 59.415 43.478 0.00 0.00 0.00 3.55
6302 8829 3.935828 GAGCCTTTAAGTGAGTCATGGTC 59.064 47.826 0.00 0.00 0.00 4.02
6303 8830 3.327757 AGCCTTTAAGTGAGTCATGGTCA 59.672 43.478 0.00 0.00 0.00 4.02
6304 8831 4.072131 GCCTTTAAGTGAGTCATGGTCAA 58.928 43.478 0.00 0.00 0.00 3.18
6305 8832 4.518970 GCCTTTAAGTGAGTCATGGTCAAA 59.481 41.667 0.00 0.00 0.00 2.69
6307 8834 6.623767 GCCTTTAAGTGAGTCATGGTCAAATC 60.624 42.308 0.00 0.00 0.00 2.17
6308 8835 6.127897 CCTTTAAGTGAGTCATGGTCAAATCC 60.128 42.308 0.00 0.00 0.00 3.01
6312 8839 0.327924 AGTCATGGTCAAATCCCGCA 59.672 50.000 0.00 0.00 0.00 5.69
6313 8840 1.064463 AGTCATGGTCAAATCCCGCAT 60.064 47.619 0.00 0.00 0.00 4.73
6314 8841 1.334869 GTCATGGTCAAATCCCGCATC 59.665 52.381 0.00 0.00 0.00 3.91
6316 8843 0.258484 ATGGTCAAATCCCGCATCCA 59.742 50.000 0.00 0.00 0.00 3.41
6317 8844 0.679640 TGGTCAAATCCCGCATCCAC 60.680 55.000 0.00 0.00 0.00 4.02
6318 8845 0.679640 GGTCAAATCCCGCATCCACA 60.680 55.000 0.00 0.00 0.00 4.17
6319 8846 1.392589 GTCAAATCCCGCATCCACAT 58.607 50.000 0.00 0.00 0.00 3.21
6320 8847 1.750778 GTCAAATCCCGCATCCACATT 59.249 47.619 0.00 0.00 0.00 2.71
6321 8848 2.166254 GTCAAATCCCGCATCCACATTT 59.834 45.455 0.00 0.00 0.00 2.32
6323 8850 3.631686 TCAAATCCCGCATCCACATTTAG 59.368 43.478 0.00 0.00 0.00 1.85
6324 8851 1.609208 ATCCCGCATCCACATTTAGC 58.391 50.000 0.00 0.00 0.00 3.09
6325 8852 0.546122 TCCCGCATCCACATTTAGCT 59.454 50.000 0.00 0.00 0.00 3.32
6326 8853 1.064758 TCCCGCATCCACATTTAGCTT 60.065 47.619 0.00 0.00 0.00 3.74
6328 8855 2.016318 CCGCATCCACATTTAGCTTGA 58.984 47.619 0.00 0.00 0.00 3.02
6330 8857 2.537529 CGCATCCACATTTAGCTTGACG 60.538 50.000 0.00 0.00 0.00 4.35
6331 8858 2.420022 GCATCCACATTTAGCTTGACGT 59.580 45.455 0.00 0.00 0.00 4.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 1.474077 GATGCGGCAGATTTGAAAGGT 59.526 47.619 9.25 0.00 0.00 3.50
66 67 4.864704 ATTCTGCAATAAAACCCGTGTT 57.135 36.364 0.00 0.00 35.82 3.32
93 94 2.195922 GCAAGAAAACCTGTGTTGCAG 58.804 47.619 1.84 0.00 42.48 4.41
126 127 3.570926 TGCAACAAAACCGTTGTTACA 57.429 38.095 4.27 2.88 46.47 2.41
127 128 4.801516 AGAATGCAACAAAACCGTTGTTAC 59.198 37.500 4.27 0.34 46.47 2.50
128 129 5.000012 AGAATGCAACAAAACCGTTGTTA 58.000 34.783 4.27 0.00 46.47 2.41
130 131 3.518634 AGAATGCAACAAAACCGTTGT 57.481 38.095 0.00 0.00 46.47 3.32
133 134 3.620821 CCAAAAGAATGCAACAAAACCGT 59.379 39.130 0.00 0.00 0.00 4.83
134 135 3.545822 GCCAAAAGAATGCAACAAAACCG 60.546 43.478 0.00 0.00 0.00 4.44
136 137 4.612932 TGCCAAAAGAATGCAACAAAAC 57.387 36.364 0.00 0.00 30.85 2.43
178 179 7.439381 ACGACAAAACCTCTCTTACAGAAATA 58.561 34.615 0.00 0.00 0.00 1.40
189 190 7.359849 GGTCTATGTTTTACGACAAAACCTCTC 60.360 40.741 19.83 11.00 38.88 3.20
220 221 8.241497 ACATATATGATGTTGCAATGGTCTTT 57.759 30.769 19.63 0.00 0.00 2.52
261 262 1.130955 GGACGCGTTTTCGTAACAGA 58.869 50.000 15.53 0.00 43.42 3.41
314 315 0.250858 CACCTTCCCTGCATGACACA 60.251 55.000 0.00 0.00 0.00 3.72
635 1155 6.334202 TGTTTTGTTTCCGTTAATTTCTGCT 58.666 32.000 0.00 0.00 0.00 4.24
636 1156 6.474102 TCTGTTTTGTTTCCGTTAATTTCTGC 59.526 34.615 0.00 0.00 0.00 4.26
637 1157 7.305993 GCTCTGTTTTGTTTCCGTTAATTTCTG 60.306 37.037 0.00 0.00 0.00 3.02
638 1158 6.695713 GCTCTGTTTTGTTTCCGTTAATTTCT 59.304 34.615 0.00 0.00 0.00 2.52
639 1159 6.074516 GGCTCTGTTTTGTTTCCGTTAATTTC 60.075 38.462 0.00 0.00 0.00 2.17
641 1161 5.286438 GGCTCTGTTTTGTTTCCGTTAATT 58.714 37.500 0.00 0.00 0.00 1.40
643 1163 3.242804 CGGCTCTGTTTTGTTTCCGTTAA 60.243 43.478 0.00 0.00 0.00 2.01
644 1164 2.288458 CGGCTCTGTTTTGTTTCCGTTA 59.712 45.455 0.00 0.00 0.00 3.18
664 1226 4.827087 ATCTCGTGCCAGCCTGCG 62.827 66.667 0.00 0.00 0.00 5.18
665 1227 2.894387 GATCTCGTGCCAGCCTGC 60.894 66.667 0.00 0.00 0.00 4.85
666 1228 0.674581 TTTGATCTCGTGCCAGCCTG 60.675 55.000 0.00 0.00 0.00 4.85
667 1229 0.254178 ATTTGATCTCGTGCCAGCCT 59.746 50.000 0.00 0.00 0.00 4.58
668 1230 0.659957 GATTTGATCTCGTGCCAGCC 59.340 55.000 0.00 0.00 0.00 4.85
669 1231 1.063174 GTGATTTGATCTCGTGCCAGC 59.937 52.381 0.00 0.00 0.00 4.85
670 1232 2.349590 TGTGATTTGATCTCGTGCCAG 58.650 47.619 0.00 0.00 0.00 4.85
680 1242 1.068333 GCAGTGCGGTTGTGATTTGAT 60.068 47.619 0.00 0.00 0.00 2.57
713 1276 0.248866 CGTTGCGATTTTATGGGGGC 60.249 55.000 0.00 0.00 0.00 5.80
714 1277 0.248866 GCGTTGCGATTTTATGGGGG 60.249 55.000 0.00 0.00 0.00 5.40
715 1278 0.453793 TGCGTTGCGATTTTATGGGG 59.546 50.000 0.00 0.00 0.00 4.96
716 1279 2.490328 ATGCGTTGCGATTTTATGGG 57.510 45.000 0.00 0.00 0.00 4.00
718 1281 5.331756 GGATGAAATGCGTTGCGATTTTATG 60.332 40.000 0.00 0.00 0.00 1.90
737 1300 0.266152 GAAGGGAGGGAGAGGGATGA 59.734 60.000 0.00 0.00 0.00 2.92
738 1301 0.766288 GGAAGGGAGGGAGAGGGATG 60.766 65.000 0.00 0.00 0.00 3.51
739 1302 1.635051 GGAAGGGAGGGAGAGGGAT 59.365 63.158 0.00 0.00 0.00 3.85
740 1305 3.010226 CGGAAGGGAGGGAGAGGGA 62.010 68.421 0.00 0.00 0.00 4.20
743 1308 1.758906 GGACGGAAGGGAGGGAGAG 60.759 68.421 0.00 0.00 0.00 3.20
744 1309 2.363361 GGACGGAAGGGAGGGAGA 59.637 66.667 0.00 0.00 0.00 3.71
745 1310 2.764547 GGGACGGAAGGGAGGGAG 60.765 72.222 0.00 0.00 0.00 4.30
783 1348 2.031465 TCCACGCGGAAGGAAACC 59.969 61.111 12.47 0.00 38.83 3.27
784 1349 2.677979 GCTCCACGCGGAAGGAAAC 61.678 63.158 12.47 6.28 42.21 2.78
785 1350 2.358247 GCTCCACGCGGAAGGAAA 60.358 61.111 12.47 0.00 42.21 3.13
786 1351 4.388499 GGCTCCACGCGGAAGGAA 62.388 66.667 12.47 0.00 42.21 3.36
906 1475 3.726517 CAACTCAACGGCCCGCTG 61.727 66.667 1.23 0.00 0.00 5.18
907 1476 3.883744 CTCAACTCAACGGCCCGCT 62.884 63.158 1.23 0.00 0.00 5.52
911 1480 3.423154 CCGCTCAACTCAACGGCC 61.423 66.667 0.00 0.00 39.08 6.13
919 1488 1.294780 CAGGAAGAGCCGCTCAACT 59.705 57.895 22.29 13.34 43.43 3.16
920 1489 1.743252 CCAGGAAGAGCCGCTCAAC 60.743 63.158 22.29 14.32 43.43 3.18
948 1517 0.043485 AAACCCTCCTCCTCCTCCTC 59.957 60.000 0.00 0.00 0.00 3.71
949 1518 0.252927 CAAACCCTCCTCCTCCTCCT 60.253 60.000 0.00 0.00 0.00 3.69
950 1519 1.275421 CCAAACCCTCCTCCTCCTCC 61.275 65.000 0.00 0.00 0.00 4.30
1047 1616 3.815569 CTCCATCCGCTCGCTCGTC 62.816 68.421 0.00 0.00 0.00 4.20
1164 1733 0.114560 AGACGGAGAAGGAGGTGGAA 59.885 55.000 0.00 0.00 0.00 3.53
1297 1867 1.149854 AATTCCGGGCGGGTATTCC 59.850 57.895 11.18 0.00 30.65 3.01
1363 1933 3.228188 AGAGAAAAACATGCTGGGTGA 57.772 42.857 0.00 0.00 0.00 4.02
1417 1990 5.982890 ACCAACAAATATTCTGAACCCTG 57.017 39.130 0.00 0.00 0.00 4.45
1464 2037 1.884235 CTCCCAACACTCTTGGTGAC 58.116 55.000 2.68 0.00 44.00 3.67
1876 2457 7.231467 ACATCAACAAGGTAAACAAGGATAGT 58.769 34.615 0.00 0.00 0.00 2.12
1915 2496 0.729116 CATGTGCACCTCGATCAACC 59.271 55.000 15.69 0.00 0.00 3.77
1916 2497 0.097674 GCATGTGCACCTCGATCAAC 59.902 55.000 15.69 0.00 41.59 3.18
1967 2586 5.457197 CCATAAGGATCAGGAACATGTCCAT 60.457 44.000 14.31 0.00 43.32 3.41
1972 2591 3.824133 TGCCATAAGGATCAGGAACATG 58.176 45.455 0.00 0.00 36.89 3.21
2138 2758 7.152645 CCTAGCACTACAACTAACTGAAGAAA 58.847 38.462 0.00 0.00 0.00 2.52
2150 2770 0.037605 ACGTGGCCTAGCACTACAAC 60.038 55.000 3.32 0.00 0.00 3.32
2166 2786 1.282248 CGCGATTGTCTCAACCACGT 61.282 55.000 0.00 0.00 0.00 4.49
2345 2965 1.205655 TCAGCTGACTCCAGTATGCAC 59.794 52.381 13.74 0.00 42.35 4.57
2354 2974 1.277557 AGTGAACCATCAGCTGACTCC 59.722 52.381 20.97 7.47 35.88 3.85
2387 3007 2.274437 GAGTCAAAGCGATGATCAGCA 58.726 47.619 12.15 0.00 35.48 4.41
2412 3032 5.247110 TCAAAGGCAGAACTTACTCATCTCT 59.753 40.000 0.00 0.00 0.00 3.10
2751 3374 5.705441 ACAAGAAATTCAGTCCATCGCTAAA 59.295 36.000 0.00 0.00 0.00 1.85
2765 3398 3.375782 AACCAGCAGCACAAGAAATTC 57.624 42.857 0.00 0.00 0.00 2.17
2874 3507 8.226810 AGTATTCAATATTCATCAATCCCCACA 58.773 33.333 0.00 0.00 0.00 4.17
3089 3723 4.082245 GGACCAACCTGAAAATGTACATGG 60.082 45.833 9.63 8.34 35.41 3.66
3152 3792 4.536090 TCACCAACATCCATATCCCCTATC 59.464 45.833 0.00 0.00 0.00 2.08
3331 3993 3.582647 ACCATGGACTACAGATGTTGTGA 59.417 43.478 21.47 0.00 41.10 3.58
3347 4009 2.414994 AGAAGCAGATCACACCATGG 57.585 50.000 11.19 11.19 0.00 3.66
3840 5249 3.194329 CCGGCTCAGCATATTCTCTATCA 59.806 47.826 0.00 0.00 0.00 2.15
4058 5896 6.904498 TCGGTTAATTTCAAGTTGGTGTATG 58.096 36.000 2.34 0.00 0.00 2.39
4106 5944 6.791303 TCACCAGACAAAAATGACAACTAAC 58.209 36.000 0.00 0.00 0.00 2.34
4167 6005 7.953158 TCTACAGTGCTATATTGATGCTTTC 57.047 36.000 0.00 0.00 0.00 2.62
4302 6140 1.001378 GCAATATAAGCTGGTTGCCCG 60.001 52.381 12.12 0.00 44.23 6.13
4476 6896 5.045578 CCAGAGAAAAGAAGAGGGTCCAATA 60.046 44.000 0.00 0.00 0.00 1.90
4506 6926 5.107182 GCTTGATCGAGGACATCAATATGTG 60.107 44.000 12.06 0.00 46.49 3.21
4700 7217 0.389037 CTGAAGAGCTGCACTGCGTA 60.389 55.000 1.02 0.00 38.13 4.42
5023 7541 2.158415 AGCATGTATGGAAATCCCCTGG 60.158 50.000 0.00 0.00 34.29 4.45
5178 7696 9.799106 AAAGGCACTGCATATAGTTTAGATAAT 57.201 29.630 2.82 0.00 40.86 1.28
5242 7760 9.965824 CCAAAATAAGTGTCTCAATTTTGTACT 57.034 29.630 14.67 0.00 43.14 2.73
5243 7761 9.191995 CCCAAAATAAGTGTCTCAATTTTGTAC 57.808 33.333 14.67 0.00 43.14 2.90
5245 7763 7.926018 GTCCCAAAATAAGTGTCTCAATTTTGT 59.074 33.333 14.67 0.00 43.14 2.83
5246 7764 7.114811 CGTCCCAAAATAAGTGTCTCAATTTTG 59.885 37.037 10.80 10.80 43.77 2.44
5248 7766 6.294508 CCGTCCCAAAATAAGTGTCTCAATTT 60.295 38.462 0.00 0.00 0.00 1.82
5250 7768 4.700213 CCGTCCCAAAATAAGTGTCTCAAT 59.300 41.667 0.00 0.00 0.00 2.57
5251 7769 4.069304 CCGTCCCAAAATAAGTGTCTCAA 58.931 43.478 0.00 0.00 0.00 3.02
5252 7770 3.325425 TCCGTCCCAAAATAAGTGTCTCA 59.675 43.478 0.00 0.00 0.00 3.27
5253 7771 3.933332 CTCCGTCCCAAAATAAGTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
5254 7772 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
5255 7773 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
5256 7774 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
5257 7775 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
5258 7776 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
5259 7777 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
5260 7778 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
5261 7779 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
5262 7780 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
5263 7781 1.961133 ATACTCCCTCCGTCCCAAAA 58.039 50.000 0.00 0.00 0.00 2.44
5264 7782 1.961133 AATACTCCCTCCGTCCCAAA 58.039 50.000 0.00 0.00 0.00 3.28
5265 7783 1.961133 AAATACTCCCTCCGTCCCAA 58.039 50.000 0.00 0.00 0.00 4.12
5266 7784 1.557832 CAAAATACTCCCTCCGTCCCA 59.442 52.381 0.00 0.00 0.00 4.37
5267 7785 1.558294 ACAAAATACTCCCTCCGTCCC 59.442 52.381 0.00 0.00 0.00 4.46
5268 7786 4.186926 GTTACAAAATACTCCCTCCGTCC 58.813 47.826 0.00 0.00 0.00 4.79
5269 7787 4.081254 AGGTTACAAAATACTCCCTCCGTC 60.081 45.833 0.00 0.00 0.00 4.79
5270 7788 3.842436 AGGTTACAAAATACTCCCTCCGT 59.158 43.478 0.00 0.00 0.00 4.69
5271 7789 4.189231 CAGGTTACAAAATACTCCCTCCG 58.811 47.826 0.00 0.00 0.00 4.63
5272 7790 3.945921 GCAGGTTACAAAATACTCCCTCC 59.054 47.826 0.00 0.00 0.00 4.30
5273 7791 4.844884 AGCAGGTTACAAAATACTCCCTC 58.155 43.478 0.00 0.00 0.00 4.30
5274 7792 4.929146 AGCAGGTTACAAAATACTCCCT 57.071 40.909 0.00 0.00 0.00 4.20
5275 7793 7.640597 AATTAGCAGGTTACAAAATACTCCC 57.359 36.000 0.00 0.00 0.00 4.30
5276 7794 7.488150 GCAAATTAGCAGGTTACAAAATACTCC 59.512 37.037 0.00 0.00 0.00 3.85
5277 7795 8.244113 AGCAAATTAGCAGGTTACAAAATACTC 58.756 33.333 0.00 0.00 36.85 2.59
5278 7796 8.122472 AGCAAATTAGCAGGTTACAAAATACT 57.878 30.769 0.00 0.00 36.85 2.12
5279 7797 8.244113 AGAGCAAATTAGCAGGTTACAAAATAC 58.756 33.333 0.00 0.00 36.85 1.89
5318 7837 4.250464 TGCGGTCGACTAATCTGAAAAAT 58.750 39.130 16.46 0.00 0.00 1.82
5358 7877 2.124151 AGCAATTAGGCCTGCCCG 60.124 61.111 17.99 2.21 39.47 6.13
5523 8043 1.595093 GCCCTTTTCCATGTCGGTGG 61.595 60.000 0.00 0.00 40.76 4.61
5559 8079 8.604890 AGCTAAAATTCTAACGACTATGCTTTC 58.395 33.333 0.00 0.00 0.00 2.62
5676 8196 7.201384 GCACAGATAAGCTTAAAGCATTCAAAC 60.201 37.037 10.85 0.00 45.56 2.93
5794 8314 2.020131 CATGTGGCATCTCTTCCGC 58.980 57.895 0.00 0.00 0.00 5.54
5845 8372 9.796120 CAATTAATAAAGGAGCGGTTGATTTAA 57.204 29.630 0.00 0.00 0.00 1.52
5846 8373 8.410141 CCAATTAATAAAGGAGCGGTTGATTTA 58.590 33.333 0.00 0.00 0.00 1.40
5847 8374 7.264947 CCAATTAATAAAGGAGCGGTTGATTT 58.735 34.615 0.00 0.00 0.00 2.17
5848 8375 6.682861 GCCAATTAATAAAGGAGCGGTTGATT 60.683 38.462 5.87 0.00 0.00 2.57
5849 8376 5.221244 GCCAATTAATAAAGGAGCGGTTGAT 60.221 40.000 5.87 0.00 0.00 2.57
5850 8377 4.097286 GCCAATTAATAAAGGAGCGGTTGA 59.903 41.667 5.87 0.00 0.00 3.18
5851 8378 4.097892 AGCCAATTAATAAAGGAGCGGTTG 59.902 41.667 5.87 0.00 0.00 3.77
5852 8379 4.278310 AGCCAATTAATAAAGGAGCGGTT 58.722 39.130 5.87 0.00 0.00 4.44
5853 8380 3.898482 AGCCAATTAATAAAGGAGCGGT 58.102 40.909 5.87 0.00 0.00 5.68
5854 8381 4.819630 TGTAGCCAATTAATAAAGGAGCGG 59.180 41.667 5.87 0.00 0.00 5.52
5855 8382 6.371809 TTGTAGCCAATTAATAAAGGAGCG 57.628 37.500 5.87 0.00 0.00 5.03
5856 8383 8.197439 ACAATTGTAGCCAATTAATAAAGGAGC 58.803 33.333 9.97 0.00 46.91 4.70
5874 8401 9.317936 CTTATTGTCTCTGATGCTACAATTGTA 57.682 33.333 17.16 17.16 41.48 2.41
5875 8402 8.043113 TCTTATTGTCTCTGATGCTACAATTGT 58.957 33.333 16.68 16.68 41.48 2.71
5876 8403 8.429493 TCTTATTGTCTCTGATGCTACAATTG 57.571 34.615 3.24 3.24 41.48 2.32
5877 8404 7.714377 CCTCTTATTGTCTCTGATGCTACAATT 59.286 37.037 5.02 0.00 41.48 2.32
5878 8405 7.070447 TCCTCTTATTGTCTCTGATGCTACAAT 59.930 37.037 0.00 0.00 43.17 2.71
5879 8406 6.381133 TCCTCTTATTGTCTCTGATGCTACAA 59.619 38.462 0.00 0.00 36.37 2.41
5880 8407 5.893824 TCCTCTTATTGTCTCTGATGCTACA 59.106 40.000 0.00 0.00 0.00 2.74
5881 8408 6.398234 TCCTCTTATTGTCTCTGATGCTAC 57.602 41.667 0.00 0.00 0.00 3.58
5882 8409 7.609097 ATTCCTCTTATTGTCTCTGATGCTA 57.391 36.000 0.00 0.00 0.00 3.49
5883 8410 5.946942 TTCCTCTTATTGTCTCTGATGCT 57.053 39.130 0.00 0.00 0.00 3.79
5884 8411 7.712639 TGTTATTCCTCTTATTGTCTCTGATGC 59.287 37.037 0.00 0.00 0.00 3.91
5885 8412 9.258826 CTGTTATTCCTCTTATTGTCTCTGATG 57.741 37.037 0.00 0.00 0.00 3.07
5886 8413 7.930865 GCTGTTATTCCTCTTATTGTCTCTGAT 59.069 37.037 0.00 0.00 0.00 2.90
5887 8414 7.268586 GCTGTTATTCCTCTTATTGTCTCTGA 58.731 38.462 0.00 0.00 0.00 3.27
5888 8415 6.481644 GGCTGTTATTCCTCTTATTGTCTCTG 59.518 42.308 0.00 0.00 0.00 3.35
5889 8416 6.156949 TGGCTGTTATTCCTCTTATTGTCTCT 59.843 38.462 0.00 0.00 0.00 3.10
5890 8417 6.349300 TGGCTGTTATTCCTCTTATTGTCTC 58.651 40.000 0.00 0.00 0.00 3.36
5891 8418 6.313519 TGGCTGTTATTCCTCTTATTGTCT 57.686 37.500 0.00 0.00 0.00 3.41
5892 8419 6.073548 CGATGGCTGTTATTCCTCTTATTGTC 60.074 42.308 0.00 0.00 0.00 3.18
5893 8420 5.760253 CGATGGCTGTTATTCCTCTTATTGT 59.240 40.000 0.00 0.00 0.00 2.71
5894 8421 5.180117 CCGATGGCTGTTATTCCTCTTATTG 59.820 44.000 0.00 0.00 0.00 1.90
5895 8422 5.308825 CCGATGGCTGTTATTCCTCTTATT 58.691 41.667 0.00 0.00 0.00 1.40
5896 8423 4.263068 CCCGATGGCTGTTATTCCTCTTAT 60.263 45.833 0.00 0.00 0.00 1.73
5897 8424 3.071023 CCCGATGGCTGTTATTCCTCTTA 59.929 47.826 0.00 0.00 0.00 2.10
5898 8425 2.158755 CCCGATGGCTGTTATTCCTCTT 60.159 50.000 0.00 0.00 0.00 2.85
5899 8426 1.417890 CCCGATGGCTGTTATTCCTCT 59.582 52.381 0.00 0.00 0.00 3.69
5900 8427 1.543429 CCCCGATGGCTGTTATTCCTC 60.543 57.143 0.00 0.00 0.00 3.71
5901 8428 0.474184 CCCCGATGGCTGTTATTCCT 59.526 55.000 0.00 0.00 0.00 3.36
5902 8429 3.021451 CCCCGATGGCTGTTATTCC 57.979 57.895 0.00 0.00 0.00 3.01
5912 8439 3.502621 ATGGATGCAGCCCCGATGG 62.503 63.158 20.33 0.00 37.09 3.51
5913 8440 1.970114 GATGGATGCAGCCCCGATG 60.970 63.158 20.33 0.00 0.00 3.84
5914 8441 2.433446 GATGGATGCAGCCCCGAT 59.567 61.111 20.33 5.06 0.00 4.18
5915 8442 3.877450 GGATGGATGCAGCCCCGA 61.877 66.667 20.33 0.00 0.00 5.14
5916 8443 2.128290 TATGGATGGATGCAGCCCCG 62.128 60.000 20.33 0.00 0.00 5.73
5917 8444 0.610232 GTATGGATGGATGCAGCCCC 60.610 60.000 20.33 14.19 0.00 5.80
5918 8445 0.111061 TGTATGGATGGATGCAGCCC 59.889 55.000 20.33 9.90 0.00 5.19
5919 8446 2.089980 GATGTATGGATGGATGCAGCC 58.910 52.381 15.83 15.83 0.00 4.85
5920 8447 2.747989 CTGATGTATGGATGGATGCAGC 59.252 50.000 0.00 0.00 0.00 5.25
5921 8448 3.008704 TCCTGATGTATGGATGGATGCAG 59.991 47.826 0.00 0.00 0.00 4.41
5922 8449 2.981081 TCCTGATGTATGGATGGATGCA 59.019 45.455 0.00 0.00 0.00 3.96
5923 8450 3.008813 ACTCCTGATGTATGGATGGATGC 59.991 47.826 0.00 0.00 0.00 3.91
5924 8451 4.565028 CCACTCCTGATGTATGGATGGATG 60.565 50.000 0.00 0.00 35.23 3.51
5925 8452 3.586174 CCACTCCTGATGTATGGATGGAT 59.414 47.826 0.00 0.00 35.23 3.41
5926 8453 2.974794 CCACTCCTGATGTATGGATGGA 59.025 50.000 0.00 0.00 35.23 3.41
5927 8454 2.707791 ACCACTCCTGATGTATGGATGG 59.292 50.000 0.00 0.00 37.21 3.51
5928 8455 3.389002 TCACCACTCCTGATGTATGGATG 59.611 47.826 0.00 0.00 34.38 3.51
5929 8456 3.657610 TCACCACTCCTGATGTATGGAT 58.342 45.455 0.00 0.00 34.38 3.41
5930 8457 3.114643 TCACCACTCCTGATGTATGGA 57.885 47.619 0.00 0.00 34.38 3.41
5931 8458 3.912496 TTCACCACTCCTGATGTATGG 57.088 47.619 0.00 0.00 36.46 2.74
5932 8459 5.287674 AGATTCACCACTCCTGATGTATG 57.712 43.478 0.00 0.00 0.00 2.39
5933 8460 5.011533 GCTAGATTCACCACTCCTGATGTAT 59.988 44.000 0.00 0.00 0.00 2.29
5934 8461 4.342378 GCTAGATTCACCACTCCTGATGTA 59.658 45.833 0.00 0.00 0.00 2.29
5935 8462 3.133721 GCTAGATTCACCACTCCTGATGT 59.866 47.826 0.00 0.00 0.00 3.06
5936 8463 3.387374 AGCTAGATTCACCACTCCTGATG 59.613 47.826 0.00 0.00 0.00 3.07
5937 8464 3.652055 AGCTAGATTCACCACTCCTGAT 58.348 45.455 0.00 0.00 0.00 2.90
5938 8465 3.107402 AGCTAGATTCACCACTCCTGA 57.893 47.619 0.00 0.00 0.00 3.86
5939 8466 3.957497 ACTAGCTAGATTCACCACTCCTG 59.043 47.826 27.45 0.00 0.00 3.86
5940 8467 4.079443 AGACTAGCTAGATTCACCACTCCT 60.079 45.833 27.45 0.00 0.00 3.69
5941 8468 4.211920 AGACTAGCTAGATTCACCACTCC 58.788 47.826 27.45 1.93 0.00 3.85
5960 8487 2.892784 AGCCCACGAATTAGCTAGAC 57.107 50.000 0.00 0.00 32.73 2.59
5962 8489 4.323553 AAGTAGCCCACGAATTAGCTAG 57.676 45.455 0.00 0.00 38.44 3.42
5963 8490 4.748277 AAAGTAGCCCACGAATTAGCTA 57.252 40.909 0.00 0.00 36.79 3.32
5964 8491 3.629142 AAAGTAGCCCACGAATTAGCT 57.371 42.857 0.00 0.00 39.37 3.32
5969 8496 5.497474 AGAACAATAAAGTAGCCCACGAAT 58.503 37.500 0.00 0.00 0.00 3.34
5974 8501 7.676683 ATAGAGAGAACAATAAAGTAGCCCA 57.323 36.000 0.00 0.00 0.00 5.36
6031 8558 9.778993 CTTCGATGATTGTTATTTCATGTCTTT 57.221 29.630 0.00 0.00 32.84 2.52
6032 8559 9.166173 TCTTCGATGATTGTTATTTCATGTCTT 57.834 29.630 0.00 0.00 32.84 3.01
6033 8560 8.722480 TCTTCGATGATTGTTATTTCATGTCT 57.278 30.769 0.00 0.00 32.84 3.41
6034 8561 9.591404 GATCTTCGATGATTGTTATTTCATGTC 57.409 33.333 14.35 0.00 32.84 3.06
6035 8562 8.278408 CGATCTTCGATGATTGTTATTTCATGT 58.722 33.333 14.35 0.00 43.74 3.21
6036 8563 7.267811 GCGATCTTCGATGATTGTTATTTCATG 59.732 37.037 22.78 0.00 43.74 3.07
6037 8564 7.293745 GCGATCTTCGATGATTGTTATTTCAT 58.706 34.615 22.78 0.00 43.74 2.57
6038 8565 6.562086 CGCGATCTTCGATGATTGTTATTTCA 60.562 38.462 22.78 0.00 43.74 2.69
6039 8566 5.780751 CGCGATCTTCGATGATTGTTATTTC 59.219 40.000 22.78 9.59 43.74 2.17
6041 8568 4.376413 GCGCGATCTTCGATGATTGTTATT 60.376 41.667 22.78 0.27 43.74 1.40
6042 8569 3.121944 GCGCGATCTTCGATGATTGTTAT 59.878 43.478 22.78 0.90 43.74 1.89
6043 8570 2.471370 GCGCGATCTTCGATGATTGTTA 59.529 45.455 22.78 0.00 43.74 2.41
6045 8572 0.855349 GCGCGATCTTCGATGATTGT 59.145 50.000 22.78 2.20 43.74 2.71
6046 8573 1.135046 AGCGCGATCTTCGATGATTG 58.865 50.000 12.10 19.52 43.74 2.67
6047 8574 1.135046 CAGCGCGATCTTCGATGATT 58.865 50.000 12.10 0.01 44.95 2.57
6048 8575 0.665670 CCAGCGCGATCTTCGATGAT 60.666 55.000 12.10 13.20 44.95 2.45
6049 8576 1.299392 CCAGCGCGATCTTCGATGA 60.299 57.895 12.10 3.19 44.95 2.92
6051 8578 2.659897 GCCAGCGCGATCTTCGAT 60.660 61.111 12.10 0.00 43.74 3.59
6065 8592 1.412710 GATACTCATCTTCGGTGGCCA 59.587 52.381 0.00 0.00 0.00 5.36
6080 8607 3.445008 TCAGCACTCAAAGAGGGATACT 58.555 45.455 0.00 0.00 34.53 2.12
6081 8608 3.895232 TCAGCACTCAAAGAGGGATAC 57.105 47.619 0.00 0.00 34.53 2.24
6082 8609 4.908601 TTTCAGCACTCAAAGAGGGATA 57.091 40.909 0.00 0.00 34.53 2.59
6083 8610 3.795688 TTTCAGCACTCAAAGAGGGAT 57.204 42.857 0.00 0.00 34.53 3.85
6084 8611 3.072915 TGATTTCAGCACTCAAAGAGGGA 59.927 43.478 0.00 0.00 34.53 4.20
6085 8612 3.190118 GTGATTTCAGCACTCAAAGAGGG 59.810 47.826 0.00 0.00 35.94 4.30
6086 8613 3.817084 TGTGATTTCAGCACTCAAAGAGG 59.183 43.478 0.00 0.00 37.18 3.69
6087 8614 5.391736 GGATGTGATTTCAGCACTCAAAGAG 60.392 44.000 0.00 0.00 37.18 2.85
6088 8615 4.456911 GGATGTGATTTCAGCACTCAAAGA 59.543 41.667 0.00 0.00 37.18 2.52
6090 8617 4.022935 GTGGATGTGATTTCAGCACTCAAA 60.023 41.667 0.00 0.00 37.18 2.69
6091 8618 3.503363 GTGGATGTGATTTCAGCACTCAA 59.497 43.478 0.00 0.00 37.18 3.02
6092 8619 3.076621 GTGGATGTGATTTCAGCACTCA 58.923 45.455 0.00 0.00 37.18 3.41
6093 8620 2.094894 CGTGGATGTGATTTCAGCACTC 59.905 50.000 0.00 0.00 37.18 3.51
6094 8621 2.079158 CGTGGATGTGATTTCAGCACT 58.921 47.619 0.00 0.00 37.18 4.40
6095 8622 1.466360 GCGTGGATGTGATTTCAGCAC 60.466 52.381 0.00 0.00 36.81 4.40
6096 8623 0.804364 GCGTGGATGTGATTTCAGCA 59.196 50.000 0.00 0.00 0.00 4.41
6097 8624 1.089920 AGCGTGGATGTGATTTCAGC 58.910 50.000 0.00 0.00 0.00 4.26
6099 8626 4.122046 CAGATAGCGTGGATGTGATTTCA 58.878 43.478 0.00 0.00 0.00 2.69
6100 8627 4.371786 TCAGATAGCGTGGATGTGATTTC 58.628 43.478 0.00 0.00 0.00 2.17
6101 8628 4.406648 TCAGATAGCGTGGATGTGATTT 57.593 40.909 0.00 0.00 0.00 2.17
6102 8629 4.406648 TTCAGATAGCGTGGATGTGATT 57.593 40.909 0.00 0.00 0.00 2.57
6103 8630 4.613925 ATTCAGATAGCGTGGATGTGAT 57.386 40.909 0.00 0.00 0.00 3.06
6104 8631 4.406648 AATTCAGATAGCGTGGATGTGA 57.593 40.909 0.00 0.00 0.00 3.58
6105 8632 5.755375 AGTAAATTCAGATAGCGTGGATGTG 59.245 40.000 0.00 0.00 0.00 3.21
6106 8633 5.918608 AGTAAATTCAGATAGCGTGGATGT 58.081 37.500 0.00 0.00 0.00 3.06
6109 8636 5.972935 TGAAGTAAATTCAGATAGCGTGGA 58.027 37.500 0.00 0.00 43.09 4.02
6120 8647 6.202570 GGTGCAGCAAAATTGAAGTAAATTCA 59.797 34.615 11.86 0.00 46.31 2.57
6122 8649 5.469760 GGGTGCAGCAAAATTGAAGTAAATT 59.530 36.000 19.06 0.00 0.00 1.82
6123 8650 4.996758 GGGTGCAGCAAAATTGAAGTAAAT 59.003 37.500 19.06 0.00 0.00 1.40
6124 8651 4.141846 TGGGTGCAGCAAAATTGAAGTAAA 60.142 37.500 19.06 0.00 0.00 2.01
6125 8652 3.386078 TGGGTGCAGCAAAATTGAAGTAA 59.614 39.130 19.06 0.00 0.00 2.24
6127 8654 1.761784 TGGGTGCAGCAAAATTGAAGT 59.238 42.857 19.06 0.00 0.00 3.01
6129 8656 1.540797 GCTGGGTGCAGCAAAATTGAA 60.541 47.619 19.06 0.00 46.73 2.69
6130 8657 0.033781 GCTGGGTGCAGCAAAATTGA 59.966 50.000 19.06 0.00 46.73 2.57
6131 8658 2.535588 GCTGGGTGCAGCAAAATTG 58.464 52.632 19.06 0.00 46.73 2.32
6150 8677 2.047655 CTAAACCTCGCCCGCACA 60.048 61.111 0.00 0.00 0.00 4.57
6151 8678 2.818274 CCTAAACCTCGCCCGCAC 60.818 66.667 0.00 0.00 0.00 5.34
6152 8679 4.770874 GCCTAAACCTCGCCCGCA 62.771 66.667 0.00 0.00 0.00 5.69
6155 8682 1.303806 TTTGGCCTAAACCTCGCCC 60.304 57.895 3.32 0.00 42.29 6.13
6156 8683 1.880894 GTTTGGCCTAAACCTCGCC 59.119 57.895 15.77 0.00 42.25 5.54
6167 8694 2.228103 GCAACTACAGTTAGGTTTGGCC 59.772 50.000 0.00 0.00 36.32 5.36
6168 8695 3.146847 AGCAACTACAGTTAGGTTTGGC 58.853 45.455 0.00 0.00 36.32 4.52
6170 8697 5.560953 GCAGAAGCAACTACAGTTAGGTTTG 60.561 44.000 0.00 5.09 41.58 2.93
6171 8698 4.515567 GCAGAAGCAACTACAGTTAGGTTT 59.484 41.667 0.00 0.00 41.58 3.27
6172 8699 4.065789 GCAGAAGCAACTACAGTTAGGTT 58.934 43.478 0.00 2.30 41.58 3.50
6174 8701 3.681897 CAGCAGAAGCAACTACAGTTAGG 59.318 47.826 0.00 0.00 45.49 2.69
6175 8702 3.124297 GCAGCAGAAGCAACTACAGTTAG 59.876 47.826 0.00 0.00 45.49 2.34
6176 8703 3.067106 GCAGCAGAAGCAACTACAGTTA 58.933 45.455 0.00 0.00 45.49 2.24
6177 8704 1.876156 GCAGCAGAAGCAACTACAGTT 59.124 47.619 0.00 0.00 45.49 3.16
6179 8706 0.441533 CGCAGCAGAAGCAACTACAG 59.558 55.000 0.00 0.00 45.49 2.74
6180 8707 0.033366 TCGCAGCAGAAGCAACTACA 59.967 50.000 0.00 0.00 45.49 2.74
6181 8708 1.148310 TTCGCAGCAGAAGCAACTAC 58.852 50.000 0.00 0.00 45.49 2.73
6182 8709 1.800586 CTTTCGCAGCAGAAGCAACTA 59.199 47.619 0.00 0.00 45.49 2.24
6183 8710 0.590195 CTTTCGCAGCAGAAGCAACT 59.410 50.000 0.00 0.00 45.49 3.16
6184 8711 3.083213 CTTTCGCAGCAGAAGCAAC 57.917 52.632 0.00 0.00 45.49 4.17
6196 8723 3.892918 AATCTGCTATGATGCTTTCGC 57.107 42.857 0.00 0.00 0.00 4.70
6197 8724 5.413969 TGAAATCTGCTATGATGCTTTCG 57.586 39.130 0.00 0.00 31.53 3.46
6198 8725 6.793349 ACTTGAAATCTGCTATGATGCTTTC 58.207 36.000 0.00 0.00 0.00 2.62
6202 8729 7.543172 TGAAAAACTTGAAATCTGCTATGATGC 59.457 33.333 0.00 0.00 0.00 3.91
6205 8732 9.630098 GAATGAAAAACTTGAAATCTGCTATGA 57.370 29.630 0.00 0.00 0.00 2.15
6206 8733 8.581263 CGAATGAAAAACTTGAAATCTGCTATG 58.419 33.333 0.00 0.00 0.00 2.23
6207 8734 7.756722 CCGAATGAAAAACTTGAAATCTGCTAT 59.243 33.333 0.00 0.00 0.00 2.97
6208 8735 7.083858 CCGAATGAAAAACTTGAAATCTGCTA 58.916 34.615 0.00 0.00 0.00 3.49
6209 8736 5.922544 CCGAATGAAAAACTTGAAATCTGCT 59.077 36.000 0.00 0.00 0.00 4.24
6211 8738 5.634859 CCCCGAATGAAAAACTTGAAATCTG 59.365 40.000 0.00 0.00 0.00 2.90
6212 8739 5.783111 CCCCGAATGAAAAACTTGAAATCT 58.217 37.500 0.00 0.00 0.00 2.40
6213 8740 4.388773 GCCCCGAATGAAAAACTTGAAATC 59.611 41.667 0.00 0.00 0.00 2.17
6214 8741 4.202305 TGCCCCGAATGAAAAACTTGAAAT 60.202 37.500 0.00 0.00 0.00 2.17
6215 8742 3.133003 TGCCCCGAATGAAAAACTTGAAA 59.867 39.130 0.00 0.00 0.00 2.69
6216 8743 2.695666 TGCCCCGAATGAAAAACTTGAA 59.304 40.909 0.00 0.00 0.00 2.69
6217 8744 2.295909 CTGCCCCGAATGAAAAACTTGA 59.704 45.455 0.00 0.00 0.00 3.02
6219 8746 1.000843 GCTGCCCCGAATGAAAAACTT 59.999 47.619 0.00 0.00 0.00 2.66
6221 8748 0.732538 CGCTGCCCCGAATGAAAAAC 60.733 55.000 0.00 0.00 0.00 2.43
6222 8749 0.891449 TCGCTGCCCCGAATGAAAAA 60.891 50.000 0.00 0.00 33.77 1.94
6225 8752 1.819208 CATCGCTGCCCCGAATGAA 60.819 57.895 0.00 0.00 41.01 2.57
6227 8754 1.819208 TTCATCGCTGCCCCGAATG 60.819 57.895 0.00 1.05 41.01 2.67
6229 8756 2.435938 GTTCATCGCTGCCCCGAA 60.436 61.111 0.00 0.00 41.01 4.30
6231 8758 1.153449 TAAGTTCATCGCTGCCCCG 60.153 57.895 0.00 0.00 0.00 5.73
6232 8759 1.095807 GGTAAGTTCATCGCTGCCCC 61.096 60.000 0.00 0.00 0.00 5.80
6233 8760 1.429148 CGGTAAGTTCATCGCTGCCC 61.429 60.000 0.00 0.00 0.00 5.36
6234 8761 0.739813 ACGGTAAGTTCATCGCTGCC 60.740 55.000 0.00 0.00 0.00 4.85
6235 8762 1.076332 AACGGTAAGTTCATCGCTGC 58.924 50.000 0.00 0.00 39.16 5.25
6236 8763 2.066262 ACAACGGTAAGTTCATCGCTG 58.934 47.619 0.00 0.00 42.02 5.18
6237 8764 2.066262 CACAACGGTAAGTTCATCGCT 58.934 47.619 0.00 0.00 42.02 4.93
6247 8774 7.514984 CTGTCATCAGAGACCACAACGGTAA 62.515 48.000 0.00 0.00 45.95 2.85
6248 8775 6.112384 CTGTCATCAGAGACCACAACGGTA 62.112 50.000 0.00 0.00 45.95 4.02
6251 8778 2.332104 CTGTCATCAGAGACCACAACG 58.668 52.381 0.00 0.00 43.76 4.10
6252 8779 2.072298 GCTGTCATCAGAGACCACAAC 58.928 52.381 0.00 0.00 43.76 3.32
6254 8781 1.001293 GTGCTGTCATCAGAGACCACA 59.999 52.381 0.00 0.00 43.76 4.17
6255 8782 1.674221 GGTGCTGTCATCAGAGACCAC 60.674 57.143 10.11 0.00 43.76 4.16
6256 8783 0.610174 GGTGCTGTCATCAGAGACCA 59.390 55.000 10.11 0.00 43.76 4.02
6257 8784 0.901124 AGGTGCTGTCATCAGAGACC 59.099 55.000 0.00 4.54 43.76 3.85
6258 8785 2.493675 TGTAGGTGCTGTCATCAGAGAC 59.506 50.000 0.00 0.00 43.76 3.36
6259 8786 2.757314 CTGTAGGTGCTGTCATCAGAGA 59.243 50.000 0.00 0.00 43.76 3.10
6260 8787 2.757314 TCTGTAGGTGCTGTCATCAGAG 59.243 50.000 0.00 0.00 43.76 3.35
6261 8788 2.757314 CTCTGTAGGTGCTGTCATCAGA 59.243 50.000 0.00 0.00 43.76 3.27
6262 8789 2.738000 GCTCTGTAGGTGCTGTCATCAG 60.738 54.545 0.00 0.00 43.87 2.90
6263 8790 1.205655 GCTCTGTAGGTGCTGTCATCA 59.794 52.381 0.00 0.00 0.00 3.07
6264 8791 1.472376 GGCTCTGTAGGTGCTGTCATC 60.472 57.143 0.00 0.00 35.10 2.92
6265 8792 0.539051 GGCTCTGTAGGTGCTGTCAT 59.461 55.000 0.00 0.00 35.10 3.06
6266 8793 0.542938 AGGCTCTGTAGGTGCTGTCA 60.543 55.000 0.00 0.00 35.10 3.58
6267 8794 0.610687 AAGGCTCTGTAGGTGCTGTC 59.389 55.000 0.00 0.00 35.10 3.51
6268 8795 1.059913 AAAGGCTCTGTAGGTGCTGT 58.940 50.000 0.00 0.00 35.10 4.40
6269 8796 3.265791 CTTAAAGGCTCTGTAGGTGCTG 58.734 50.000 0.00 0.00 35.10 4.41
6270 8797 2.907042 ACTTAAAGGCTCTGTAGGTGCT 59.093 45.455 0.00 0.00 35.10 4.40
6272 8799 4.021016 ACTCACTTAAAGGCTCTGTAGGTG 60.021 45.833 7.79 7.79 34.05 4.00
6273 8800 4.161102 ACTCACTTAAAGGCTCTGTAGGT 58.839 43.478 0.00 0.00 0.00 3.08
6277 8804 4.564406 CCATGACTCACTTAAAGGCTCTGT 60.564 45.833 0.00 0.00 0.00 3.41
6278 8805 3.937706 CCATGACTCACTTAAAGGCTCTG 59.062 47.826 0.00 0.00 0.00 3.35
6279 8806 3.584848 ACCATGACTCACTTAAAGGCTCT 59.415 43.478 0.00 0.00 0.00 4.09
6280 8807 3.935828 GACCATGACTCACTTAAAGGCTC 59.064 47.826 0.00 0.00 0.00 4.70
6281 8808 3.327757 TGACCATGACTCACTTAAAGGCT 59.672 43.478 0.00 0.00 0.00 4.58
6282 8809 3.674997 TGACCATGACTCACTTAAAGGC 58.325 45.455 0.00 0.00 0.00 4.35
6283 8810 6.127897 GGATTTGACCATGACTCACTTAAAGG 60.128 42.308 0.00 0.00 0.00 3.11
6285 8812 5.710099 GGGATTTGACCATGACTCACTTAAA 59.290 40.000 0.00 0.00 0.00 1.52
6286 8813 5.253330 GGGATTTGACCATGACTCACTTAA 58.747 41.667 0.00 0.00 0.00 1.85
6288 8815 3.690460 GGGATTTGACCATGACTCACTT 58.310 45.455 0.00 0.00 0.00 3.16
6289 8816 2.355108 CGGGATTTGACCATGACTCACT 60.355 50.000 0.00 0.00 0.00 3.41
6290 8817 2.009774 CGGGATTTGACCATGACTCAC 58.990 52.381 0.00 0.00 0.00 3.51
6292 8819 1.017387 GCGGGATTTGACCATGACTC 58.983 55.000 0.00 0.00 0.00 3.36
6293 8820 0.327924 TGCGGGATTTGACCATGACT 59.672 50.000 0.00 0.00 0.00 3.41
6294 8821 1.334869 GATGCGGGATTTGACCATGAC 59.665 52.381 0.00 0.00 0.00 3.06
6295 8822 1.679139 GATGCGGGATTTGACCATGA 58.321 50.000 0.00 0.00 0.00 3.07
6297 8824 0.258484 TGGATGCGGGATTTGACCAT 59.742 50.000 0.00 0.00 0.00 3.55
6298 8825 0.679640 GTGGATGCGGGATTTGACCA 60.680 55.000 0.00 0.00 0.00 4.02
6299 8826 0.679640 TGTGGATGCGGGATTTGACC 60.680 55.000 0.00 0.00 0.00 4.02
6300 8827 1.392589 ATGTGGATGCGGGATTTGAC 58.607 50.000 0.00 0.00 0.00 3.18
6301 8828 2.142356 AATGTGGATGCGGGATTTGA 57.858 45.000 0.00 0.00 0.00 2.69
6302 8829 2.965572 AAATGTGGATGCGGGATTTG 57.034 45.000 0.00 0.00 0.00 2.32
6303 8830 2.362077 GCTAAATGTGGATGCGGGATTT 59.638 45.455 0.00 0.00 0.00 2.17
6304 8831 1.956477 GCTAAATGTGGATGCGGGATT 59.044 47.619 0.00 0.00 0.00 3.01
6305 8832 1.143684 AGCTAAATGTGGATGCGGGAT 59.856 47.619 0.00 0.00 0.00 3.85
6307 8834 1.066002 CAAGCTAAATGTGGATGCGGG 59.934 52.381 0.00 0.00 0.00 6.13
6308 8835 2.016318 TCAAGCTAAATGTGGATGCGG 58.984 47.619 0.00 0.00 0.00 5.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.