Multiple sequence alignment - TraesCS5D01G243800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G243800 chr5D 100.000 4736 0 0 1 4736 351810123 351805388 0.000000e+00 8746.0
1 TraesCS5D01G243800 chr5D 96.126 826 18 3 1 813 288068933 288068109 0.000000e+00 1336.0
2 TraesCS5D01G243800 chr5D 95.620 822 23 2 1 809 502189714 502188893 0.000000e+00 1306.0
3 TraesCS5D01G243800 chr5D 86.364 748 76 14 75 810 486003963 486003230 0.000000e+00 793.0
4 TraesCS5D01G243800 chr5D 96.000 275 8 3 539 810 351816694 351816968 1.210000e-120 444.0
5 TraesCS5D01G243800 chr5D 76.307 612 112 23 2627 3211 1801635 1802240 3.580000e-76 296.0
6 TraesCS5D01G243800 chr5B 94.868 3293 125 16 810 4063 417151308 417154595 0.000000e+00 5105.0
7 TraesCS5D01G243800 chr5B 88.048 251 19 1 4085 4324 417154742 417154992 2.160000e-73 287.0
8 TraesCS5D01G243800 chr5B 94.872 78 4 0 4085 4162 417154641 417154718 6.440000e-24 122.0
9 TraesCS5D01G243800 chr5A 92.578 3247 185 28 813 4020 454269488 454272717 0.000000e+00 4610.0
10 TraesCS5D01G243800 chr1D 98.148 810 14 1 1 809 415412248 415413057 0.000000e+00 1411.0
11 TraesCS5D01G243800 chr1D 96.970 264 7 1 547 809 415405463 415405200 4.350000e-120 442.0
12 TraesCS5D01G243800 chr2D 97.297 814 20 2 1 812 606645472 606646285 0.000000e+00 1380.0
13 TraesCS5D01G243800 chr2D 96.233 823 18 2 1 810 63941046 63940224 0.000000e+00 1336.0
14 TraesCS5D01G243800 chr2D 96.212 264 9 1 547 809 606638745 606638482 9.420000e-117 431.0
15 TraesCS5D01G243800 chr6D 96.019 829 19 3 1 816 4313315 4312488 0.000000e+00 1336.0
16 TraesCS5D01G243800 chr7D 95.869 823 21 2 1 810 514671625 514672447 0.000000e+00 1319.0
17 TraesCS5D01G243800 chr7D 94.624 744 15 5 1 732 506643738 506643008 0.000000e+00 1129.0
18 TraesCS5D01G243800 chr3D 95.758 825 21 6 1 811 550461513 550460689 0.000000e+00 1317.0
19 TraesCS5D01G243800 chr4B 88.667 750 66 15 75 809 648696447 648695702 0.000000e+00 896.0
20 TraesCS5D01G243800 chr4B 72.574 237 54 10 2976 3205 50836411 50836179 3.060000e-07 67.6
21 TraesCS5D01G243800 chr1B 86.587 753 81 13 75 808 453431803 453432554 0.000000e+00 813.0
22 TraesCS5D01G243800 chr7A 83.422 748 90 16 75 809 546552619 546553345 0.000000e+00 664.0
23 TraesCS5D01G243800 chr6B 78.148 691 137 12 2536 3222 633549204 633549884 1.220000e-115 427.0
24 TraesCS5D01G243800 chrUn 76.307 612 112 18 2627 3211 122077105 122077710 3.580000e-76 296.0
25 TraesCS5D01G243800 chr4D 72.973 222 49 10 2976 3190 35165726 35165943 3.060000e-07 67.6
26 TraesCS5D01G243800 chr4A 76.577 111 23 2 3098 3205 567480019 567479909 1.840000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G243800 chr5D 351805388 351810123 4735 True 8746 8746 100.000 1 4736 1 chr5D.!!$R2 4735
1 TraesCS5D01G243800 chr5D 288068109 288068933 824 True 1336 1336 96.126 1 813 1 chr5D.!!$R1 812
2 TraesCS5D01G243800 chr5D 502188893 502189714 821 True 1306 1306 95.620 1 809 1 chr5D.!!$R4 808
3 TraesCS5D01G243800 chr5D 486003230 486003963 733 True 793 793 86.364 75 810 1 chr5D.!!$R3 735
4 TraesCS5D01G243800 chr5D 1801635 1802240 605 False 296 296 76.307 2627 3211 1 chr5D.!!$F1 584
5 TraesCS5D01G243800 chr5B 417151308 417154992 3684 False 1838 5105 92.596 810 4324 3 chr5B.!!$F1 3514
6 TraesCS5D01G243800 chr5A 454269488 454272717 3229 False 4610 4610 92.578 813 4020 1 chr5A.!!$F1 3207
7 TraesCS5D01G243800 chr1D 415412248 415413057 809 False 1411 1411 98.148 1 809 1 chr1D.!!$F1 808
8 TraesCS5D01G243800 chr2D 606645472 606646285 813 False 1380 1380 97.297 1 812 1 chr2D.!!$F1 811
9 TraesCS5D01G243800 chr2D 63940224 63941046 822 True 1336 1336 96.233 1 810 1 chr2D.!!$R1 809
10 TraesCS5D01G243800 chr6D 4312488 4313315 827 True 1336 1336 96.019 1 816 1 chr6D.!!$R1 815
11 TraesCS5D01G243800 chr7D 514671625 514672447 822 False 1319 1319 95.869 1 810 1 chr7D.!!$F1 809
12 TraesCS5D01G243800 chr7D 506643008 506643738 730 True 1129 1129 94.624 1 732 1 chr7D.!!$R1 731
13 TraesCS5D01G243800 chr3D 550460689 550461513 824 True 1317 1317 95.758 1 811 1 chr3D.!!$R1 810
14 TraesCS5D01G243800 chr4B 648695702 648696447 745 True 896 896 88.667 75 809 1 chr4B.!!$R2 734
15 TraesCS5D01G243800 chr1B 453431803 453432554 751 False 813 813 86.587 75 808 1 chr1B.!!$F1 733
16 TraesCS5D01G243800 chr7A 546552619 546553345 726 False 664 664 83.422 75 809 1 chr7A.!!$F1 734
17 TraesCS5D01G243800 chr6B 633549204 633549884 680 False 427 427 78.148 2536 3222 1 chr6B.!!$F1 686
18 TraesCS5D01G243800 chrUn 122077105 122077710 605 False 296 296 76.307 2627 3211 1 chrUn.!!$F1 584

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
921 987 1.672356 CTTCTTCCTGCCCACACCG 60.672 63.158 0.0 0.0 0.0 4.94 F
2370 2454 0.469494 TGCCGATCATACTGCCATGT 59.531 50.000 0.0 0.0 0.0 3.21 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2392 2476 0.029035 GAGTACCATGCGACGACGAT 59.971 55.0 12.29 0.0 42.66 3.73 R
4272 4546 0.039074 CCTCGTTGACTCGAAGTGCT 60.039 55.0 0.00 0.0 39.34 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
122 123 8.389779 TGAACTAATTTGAGAGTGCAATACAA 57.610 30.769 0.00 0.00 27.69 2.41
802 857 3.181455 TGAACTGTGGTACTTCTGTGCAT 60.181 43.478 0.00 0.00 0.00 3.96
806 861 4.755123 ACTGTGGTACTTCTGTGCATTAAC 59.245 41.667 0.00 0.00 0.00 2.01
807 862 4.968259 TGTGGTACTTCTGTGCATTAACT 58.032 39.130 0.00 0.00 0.00 2.24
808 863 4.994852 TGTGGTACTTCTGTGCATTAACTC 59.005 41.667 0.00 0.00 0.00 3.01
888 954 2.251371 GCCGCACCGAAAACAGAC 59.749 61.111 0.00 0.00 0.00 3.51
921 987 1.672356 CTTCTTCCTGCCCACACCG 60.672 63.158 0.00 0.00 0.00 4.94
1061 1142 2.445654 CCTGCTCCTCCTCCTCCC 60.446 72.222 0.00 0.00 0.00 4.30
1138 1219 0.970937 CCCAGACTTCACCGCCTCTA 60.971 60.000 0.00 0.00 0.00 2.43
1139 1220 0.895530 CCAGACTTCACCGCCTCTAA 59.104 55.000 0.00 0.00 0.00 2.10
1191 1272 4.072088 GAGTCCAACAACGGCGCG 62.072 66.667 6.90 0.00 0.00 6.86
1698 1779 1.414897 GGCGTCGATGTCGTTCAAC 59.585 57.895 6.48 0.00 40.80 3.18
1836 1917 2.435059 GCGCTGGTGAACTCCTCC 60.435 66.667 0.00 0.00 0.00 4.30
1974 2055 4.735132 TTCGCCGCCTCCGTGAAG 62.735 66.667 0.00 0.00 0.00 3.02
1983 2064 2.522436 TCCGTGAAGGTGTCCGGT 60.522 61.111 0.00 0.00 39.63 5.28
2052 2136 2.033141 ACCAACAGCAGCGCATCT 59.967 55.556 11.47 2.17 0.00 2.90
2178 2262 2.482374 GCGAACTGCACATGCCTC 59.518 61.111 0.49 0.00 45.45 4.70
2283 2367 0.746563 CACCGGCGTTGGGATACATT 60.747 55.000 6.01 0.00 39.74 2.71
2289 2373 2.876550 GGCGTTGGGATACATTAAGACC 59.123 50.000 0.00 0.00 39.74 3.85
2336 2420 0.818040 AACAAAGGCGGCTCTTCGTT 60.818 50.000 13.70 10.53 0.00 3.85
2367 2451 1.209261 TCTTTGCCGATCATACTGCCA 59.791 47.619 0.00 0.00 0.00 4.92
2370 2454 0.469494 TGCCGATCATACTGCCATGT 59.531 50.000 0.00 0.00 0.00 3.21
2392 2476 2.168326 TGCAGCGTTTCTTCTCATCA 57.832 45.000 0.00 0.00 0.00 3.07
2397 2481 3.000277 CAGCGTTTCTTCTCATCATCGTC 60.000 47.826 0.00 0.00 0.00 4.20
2400 2484 3.238570 CGTTTCTTCTCATCATCGTCGTC 59.761 47.826 0.00 0.00 0.00 4.20
2412 2496 1.933041 CGTCGTCGCATGGTACTCG 60.933 63.158 0.00 0.00 0.00 4.18
2470 2554 3.178540 AAGGGCAAGAACTCCGCGT 62.179 57.895 4.92 0.00 0.00 6.01
2513 2597 3.675619 AAAATCCGCGGTCGAGGGG 62.676 63.158 27.15 1.68 44.59 4.79
2847 2934 0.601558 ACGAGTACATGAACCGCAGT 59.398 50.000 0.00 0.00 0.00 4.40
3360 3480 2.470821 GACGATTACTTCCCGATGGTG 58.529 52.381 0.00 0.00 0.00 4.17
3722 3842 2.912986 TGTCATTGCAGGACACGTC 58.087 52.632 16.54 0.00 40.16 4.34
3737 3857 2.202878 GTCGGCGCCAAGATAGCA 60.203 61.111 28.98 0.00 0.00 3.49
3764 3897 3.604629 GGCACGTCTCAGCTCCTA 58.395 61.111 0.00 0.00 0.00 2.94
3767 3900 0.249238 GCACGTCTCAGCTCCTATGG 60.249 60.000 0.00 0.00 0.00 2.74
3815 3948 1.548986 GCGGCAACTTGTATCATTGC 58.451 50.000 0.00 0.00 46.39 3.56
3851 3989 1.412710 CAAGGCGAGGATAACCAGCTA 59.587 52.381 8.85 0.00 40.23 3.32
3862 4000 7.329746 AGGATAACCAGCTATAATTAGGCAA 57.670 36.000 13.34 0.00 38.94 4.52
3911 4049 8.404765 GGTGTACTAGAAAATAGTAGAGTGGTC 58.595 40.741 0.00 0.00 31.41 4.02
3915 4053 8.824756 ACTAGAAAATAGTAGAGTGGTCATCA 57.175 34.615 0.00 0.00 0.00 3.07
3945 4083 5.689514 TGATAAACAAGTTGCATTTGGTTCG 59.310 36.000 15.52 0.00 36.82 3.95
3951 4089 4.164822 AGTTGCATTTGGTTCGAATCAG 57.835 40.909 11.58 1.35 0.00 2.90
3979 4117 4.058817 GCTGTGCAGTTCAAGTACTACTT 58.941 43.478 0.00 0.00 39.39 2.24
3995 4133 8.632906 AGTACTACTTGTATTGTCACACTAGT 57.367 34.615 0.00 0.00 35.44 2.57
4035 4173 3.131396 ACAAAGCCAGTAACGTGAAGAG 58.869 45.455 0.00 0.00 0.00 2.85
4063 4201 9.132521 CAGAATTTTCAAAGCCAGTATAACAAG 57.867 33.333 0.00 0.00 0.00 3.16
4064 4202 8.860088 AGAATTTTCAAAGCCAGTATAACAAGT 58.140 29.630 0.00 0.00 0.00 3.16
4065 4203 9.476202 GAATTTTCAAAGCCAGTATAACAAGTT 57.524 29.630 0.00 0.00 0.00 2.66
4068 4206 9.738832 TTTTCAAAGCCAGTATAACAAGTTAAC 57.261 29.630 0.00 0.00 0.00 2.01
4071 4209 8.347035 TCAAAGCCAGTATAACAAGTTAACAAC 58.653 33.333 8.61 0.00 0.00 3.32
4073 4211 5.410439 AGCCAGTATAACAAGTTAACAACGG 59.590 40.000 8.61 0.00 36.23 4.44
4074 4212 5.409214 GCCAGTATAACAAGTTAACAACGGA 59.591 40.000 8.61 0.00 36.23 4.69
4077 4215 9.153721 CCAGTATAACAAGTTAACAACGGATAA 57.846 33.333 8.61 0.00 36.23 1.75
4080 4218 9.977762 GTATAACAAGTTAACAACGGATAAAGG 57.022 33.333 8.61 0.00 36.23 3.11
4083 4221 7.373778 ACAAGTTAACAACGGATAAAGGATC 57.626 36.000 8.61 0.00 36.23 3.36
4142 4405 3.058914 GGTCTCTCACCACATTTTTGACG 60.059 47.826 0.00 0.00 45.98 4.35
4146 4409 3.380004 TCTCACCACATTTTTGACGCTTT 59.620 39.130 0.00 0.00 0.00 3.51
4179 4442 3.588057 TTGGCAGATGCACTCGCGA 62.588 57.895 9.26 9.26 44.36 5.87
4198 4461 1.374758 GCTAACGCTGGCTGTGACT 60.375 57.895 12.08 1.29 0.00 3.41
4211 4474 7.260603 GCTGGCTGTGACTTAATTAATTTGAT 58.739 34.615 5.91 0.00 0.00 2.57
4223 4486 5.535753 ATTAATTTGATTAGCAGCCCCAC 57.464 39.130 0.00 0.00 0.00 4.61
4242 4505 3.118956 CCACCAGGCAGTTTGTTTAAACA 60.119 43.478 17.01 17.01 46.76 2.83
4249 4512 4.286910 GCAGTTTGTTTAAACATCTCGCA 58.713 39.130 21.17 3.00 46.76 5.10
4250 4513 4.146443 GCAGTTTGTTTAAACATCTCGCAC 59.854 41.667 21.17 11.13 46.76 5.34
4272 4546 6.237996 GCACTAAACGCAATAATGTAGCACTA 60.238 38.462 0.00 0.00 0.00 2.74
4279 4553 5.557136 CGCAATAATGTAGCACTAGCACTTC 60.557 44.000 0.00 0.00 45.49 3.01
4297 4571 0.809385 TCGAGTCAACGAGGATGTCC 59.191 55.000 0.00 0.00 37.37 4.02
4326 4600 2.584166 CGTCGTCTACGTGTAAGTGT 57.416 50.000 0.00 0.00 46.72 3.55
4327 4601 3.705275 CGTCGTCTACGTGTAAGTGTA 57.295 47.619 0.00 0.00 46.72 2.90
4328 4602 4.052630 CGTCGTCTACGTGTAAGTGTAA 57.947 45.455 0.00 0.00 46.72 2.41
4329 4603 4.077665 CGTCGTCTACGTGTAAGTGTAAG 58.922 47.826 0.00 0.00 46.72 2.34
4330 4604 4.376413 CGTCGTCTACGTGTAAGTGTAAGT 60.376 45.833 0.00 0.00 46.72 2.24
4331 4605 5.444122 GTCGTCTACGTGTAAGTGTAAGTT 58.556 41.667 0.00 0.00 40.80 2.66
4332 4606 5.338035 GTCGTCTACGTGTAAGTGTAAGTTG 59.662 44.000 0.00 0.00 40.80 3.16
4333 4607 5.007626 TCGTCTACGTGTAAGTGTAAGTTGT 59.992 40.000 0.00 0.00 40.80 3.32
4334 4608 5.338035 CGTCTACGTGTAAGTGTAAGTTGTC 59.662 44.000 0.00 0.00 34.11 3.18
4335 4609 6.201517 GTCTACGTGTAAGTGTAAGTTGTCA 58.798 40.000 0.00 0.00 0.00 3.58
4336 4610 6.692681 GTCTACGTGTAAGTGTAAGTTGTCAA 59.307 38.462 0.00 0.00 0.00 3.18
4337 4611 5.707411 ACGTGTAAGTGTAAGTTGTCAAC 57.293 39.130 7.68 7.68 0.00 3.18
4338 4612 4.266029 ACGTGTAAGTGTAAGTTGTCAACG 59.734 41.667 10.02 0.00 36.23 4.10
4339 4613 4.500117 CGTGTAAGTGTAAGTTGTCAACGA 59.500 41.667 10.02 0.00 36.23 3.85
4340 4614 5.331309 CGTGTAAGTGTAAGTTGTCAACGAG 60.331 44.000 10.02 0.00 36.23 4.18
4341 4615 5.045215 TGTAAGTGTAAGTTGTCAACGAGG 58.955 41.667 10.02 0.00 36.23 4.63
4342 4616 3.814005 AGTGTAAGTTGTCAACGAGGT 57.186 42.857 10.02 0.58 36.23 3.85
4343 4617 4.133013 AGTGTAAGTTGTCAACGAGGTT 57.867 40.909 10.02 2.04 36.23 3.50
4344 4618 3.869246 AGTGTAAGTTGTCAACGAGGTTG 59.131 43.478 10.02 2.16 43.99 3.77
4345 4619 3.619929 GTGTAAGTTGTCAACGAGGTTGT 59.380 43.478 10.02 0.00 43.23 3.32
4346 4620 3.866910 TGTAAGTTGTCAACGAGGTTGTC 59.133 43.478 10.02 3.96 43.23 3.18
4347 4621 1.949465 AGTTGTCAACGAGGTTGTCC 58.051 50.000 10.02 2.23 43.23 4.02
4349 4623 1.597663 GTTGTCAACGAGGTTGTCCTG 59.402 52.381 8.21 0.00 45.24 3.86
4350 4624 1.116308 TGTCAACGAGGTTGTCCTGA 58.884 50.000 8.21 0.00 45.24 3.86
4351 4625 1.483004 TGTCAACGAGGTTGTCCTGAA 59.517 47.619 8.21 0.00 45.24 3.02
4352 4626 2.104111 TGTCAACGAGGTTGTCCTGAAT 59.896 45.455 8.21 0.00 45.24 2.57
4353 4627 3.322541 TGTCAACGAGGTTGTCCTGAATA 59.677 43.478 8.21 0.00 45.24 1.75
4354 4628 4.020573 TGTCAACGAGGTTGTCCTGAATAT 60.021 41.667 8.21 0.00 45.24 1.28
4355 4629 4.935808 GTCAACGAGGTTGTCCTGAATATT 59.064 41.667 8.21 0.00 45.24 1.28
4356 4630 6.103997 GTCAACGAGGTTGTCCTGAATATTA 58.896 40.000 8.21 0.00 45.24 0.98
4357 4631 6.035758 GTCAACGAGGTTGTCCTGAATATTAC 59.964 42.308 8.21 0.00 45.24 1.89
4358 4632 4.679662 ACGAGGTTGTCCTGAATATTACG 58.320 43.478 0.00 0.00 45.24 3.18
4359 4633 4.400251 ACGAGGTTGTCCTGAATATTACGA 59.600 41.667 0.00 0.00 45.24 3.43
4360 4634 4.976731 CGAGGTTGTCCTGAATATTACGAG 59.023 45.833 0.00 0.00 45.24 4.18
4361 4635 5.277857 AGGTTGTCCTGAATATTACGAGG 57.722 43.478 0.00 0.00 43.33 4.63
4362 4636 4.960469 AGGTTGTCCTGAATATTACGAGGA 59.040 41.667 6.34 6.34 43.33 3.71
4363 4637 5.069251 AGGTTGTCCTGAATATTACGAGGAG 59.931 44.000 9.59 0.00 43.33 3.69
4364 4638 4.585955 TGTCCTGAATATTACGAGGAGC 57.414 45.455 9.59 6.82 35.23 4.70
4365 4639 3.958147 TGTCCTGAATATTACGAGGAGCA 59.042 43.478 9.59 8.57 35.23 4.26
4366 4640 4.404394 TGTCCTGAATATTACGAGGAGCAA 59.596 41.667 9.59 0.00 35.23 3.91
4367 4641 5.105106 TGTCCTGAATATTACGAGGAGCAAA 60.105 40.000 9.59 0.00 35.23 3.68
4368 4642 5.463724 GTCCTGAATATTACGAGGAGCAAAG 59.536 44.000 9.59 0.00 35.23 2.77
4369 4643 4.212214 CCTGAATATTACGAGGAGCAAAGC 59.788 45.833 0.00 0.00 0.00 3.51
4370 4644 5.023533 TGAATATTACGAGGAGCAAAGCT 57.976 39.130 0.00 0.00 43.88 3.74
4371 4645 4.811024 TGAATATTACGAGGAGCAAAGCTG 59.189 41.667 0.00 0.00 39.88 4.24
4372 4646 2.029838 ATTACGAGGAGCAAAGCTGG 57.970 50.000 0.00 0.00 39.88 4.85
4373 4647 0.673644 TTACGAGGAGCAAAGCTGGC 60.674 55.000 0.00 2.51 39.88 4.85
4374 4648 1.544825 TACGAGGAGCAAAGCTGGCT 61.545 55.000 12.56 12.56 46.07 4.75
4375 4649 2.396955 CGAGGAGCAAAGCTGGCTG 61.397 63.158 17.04 2.26 42.78 4.85
4385 4659 2.047844 GCTGGCTGCGAGACTCAA 60.048 61.111 16.17 0.00 0.00 3.02
4386 4660 1.669115 GCTGGCTGCGAGACTCAAA 60.669 57.895 16.17 0.00 0.00 2.69
4387 4661 1.023513 GCTGGCTGCGAGACTCAAAT 61.024 55.000 16.17 0.00 0.00 2.32
4388 4662 1.005340 CTGGCTGCGAGACTCAAATC 58.995 55.000 5.68 0.00 0.00 2.17
4389 4663 0.610174 TGGCTGCGAGACTCAAATCT 59.390 50.000 2.82 0.00 0.00 2.40
4390 4664 1.285578 GGCTGCGAGACTCAAATCTC 58.714 55.000 2.82 0.00 41.57 2.75
4391 4665 1.404717 GGCTGCGAGACTCAAATCTCA 60.405 52.381 2.82 0.00 44.67 3.27
4392 4666 1.925847 GCTGCGAGACTCAAATCTCAG 59.074 52.381 2.82 1.32 44.67 3.35
4393 4667 2.673610 GCTGCGAGACTCAAATCTCAGT 60.674 50.000 2.82 0.00 44.67 3.41
4394 4668 3.428180 GCTGCGAGACTCAAATCTCAGTA 60.428 47.826 2.82 0.00 44.67 2.74
4395 4669 4.098055 TGCGAGACTCAAATCTCAGTAC 57.902 45.455 2.82 0.00 44.67 2.73
4396 4670 3.102276 GCGAGACTCAAATCTCAGTACG 58.898 50.000 2.82 0.00 44.67 3.67
4397 4671 3.426426 GCGAGACTCAAATCTCAGTACGT 60.426 47.826 2.82 0.00 44.67 3.57
4398 4672 4.092120 CGAGACTCAAATCTCAGTACGTG 58.908 47.826 0.00 0.00 44.67 4.49
4399 4673 3.839293 AGACTCAAATCTCAGTACGTGC 58.161 45.455 0.00 0.00 0.00 5.34
4400 4674 3.255888 AGACTCAAATCTCAGTACGTGCA 59.744 43.478 6.38 0.00 0.00 4.57
4401 4675 3.987868 GACTCAAATCTCAGTACGTGCAA 59.012 43.478 6.38 0.00 0.00 4.08
4402 4676 3.990469 ACTCAAATCTCAGTACGTGCAAG 59.010 43.478 6.38 0.00 0.00 4.01
4403 4677 3.990092 TCAAATCTCAGTACGTGCAAGT 58.010 40.909 10.83 10.83 0.00 3.16
4404 4678 4.377021 TCAAATCTCAGTACGTGCAAGTT 58.623 39.130 11.38 0.00 0.00 2.66
4405 4679 4.211164 TCAAATCTCAGTACGTGCAAGTTG 59.789 41.667 11.38 4.25 0.00 3.16
4406 4680 2.882927 TCTCAGTACGTGCAAGTTGT 57.117 45.000 11.38 0.00 0.00 3.32
4407 4681 3.994204 TCTCAGTACGTGCAAGTTGTA 57.006 42.857 11.38 0.00 0.00 2.41
4408 4682 4.310357 TCTCAGTACGTGCAAGTTGTAA 57.690 40.909 11.38 0.00 0.00 2.41
4409 4683 4.878439 TCTCAGTACGTGCAAGTTGTAAT 58.122 39.130 11.38 0.00 0.00 1.89
4410 4684 4.684242 TCTCAGTACGTGCAAGTTGTAATG 59.316 41.667 11.38 10.17 35.98 1.90
4411 4685 3.185594 TCAGTACGTGCAAGTTGTAATGC 59.814 43.478 11.38 0.00 42.86 3.56
4412 4686 2.156891 AGTACGTGCAAGTTGTAATGCG 59.843 45.455 11.38 2.95 45.47 4.73
4413 4687 0.385473 ACGTGCAAGTTGTAATGCGC 60.385 50.000 0.00 0.00 45.47 6.09
4414 4688 3.773117 GTGCAAGTTGTAATGCGCT 57.227 47.368 9.73 0.00 46.65 5.92
4415 4689 2.050477 GTGCAAGTTGTAATGCGCTT 57.950 45.000 9.73 0.00 46.65 4.68
4416 4690 2.393764 GTGCAAGTTGTAATGCGCTTT 58.606 42.857 9.73 11.90 46.65 3.51
4417 4691 2.405025 GTGCAAGTTGTAATGCGCTTTC 59.595 45.455 12.27 5.34 46.65 2.62
4418 4692 2.293122 TGCAAGTTGTAATGCGCTTTCT 59.707 40.909 12.27 0.50 45.47 2.52
4419 4693 3.243367 TGCAAGTTGTAATGCGCTTTCTT 60.243 39.130 12.27 6.82 45.47 2.52
4420 4694 3.735746 GCAAGTTGTAATGCGCTTTCTTT 59.264 39.130 12.27 0.00 32.17 2.52
4421 4695 4.209080 GCAAGTTGTAATGCGCTTTCTTTT 59.791 37.500 12.27 0.00 32.17 2.27
4422 4696 5.659426 CAAGTTGTAATGCGCTTTCTTTTG 58.341 37.500 12.27 7.74 0.00 2.44
4423 4697 5.181690 AGTTGTAATGCGCTTTCTTTTGA 57.818 34.783 12.27 0.00 0.00 2.69
4424 4698 5.587289 AGTTGTAATGCGCTTTCTTTTGAA 58.413 33.333 12.27 0.00 36.52 2.69
4425 4699 6.039616 AGTTGTAATGCGCTTTCTTTTGAAA 58.960 32.000 12.27 0.00 45.20 2.69
4426 4700 5.881637 TGTAATGCGCTTTCTTTTGAAAC 57.118 34.783 12.27 3.34 42.84 2.78
4427 4701 4.742659 TGTAATGCGCTTTCTTTTGAAACC 59.257 37.500 12.27 0.00 42.84 3.27
4428 4702 2.949451 TGCGCTTTCTTTTGAAACCA 57.051 40.000 9.73 0.00 42.84 3.67
4429 4703 3.451141 TGCGCTTTCTTTTGAAACCAT 57.549 38.095 9.73 0.00 42.84 3.55
4430 4704 4.576216 TGCGCTTTCTTTTGAAACCATA 57.424 36.364 9.73 0.00 42.84 2.74
4431 4705 4.545610 TGCGCTTTCTTTTGAAACCATAG 58.454 39.130 9.73 0.00 42.84 2.23
4432 4706 4.037446 TGCGCTTTCTTTTGAAACCATAGT 59.963 37.500 9.73 0.00 42.84 2.12
4433 4707 4.617223 GCGCTTTCTTTTGAAACCATAGTC 59.383 41.667 0.00 0.00 42.84 2.59
4434 4708 5.757886 CGCTTTCTTTTGAAACCATAGTCA 58.242 37.500 0.00 0.00 42.84 3.41
4435 4709 6.205784 CGCTTTCTTTTGAAACCATAGTCAA 58.794 36.000 0.00 0.00 42.84 3.18
4436 4710 6.695278 CGCTTTCTTTTGAAACCATAGTCAAA 59.305 34.615 0.00 0.00 42.84 2.69
4437 4711 7.221838 CGCTTTCTTTTGAAACCATAGTCAAAA 59.778 33.333 10.24 10.24 46.31 2.44
4438 4712 8.328146 GCTTTCTTTTGAAACCATAGTCAAAAC 58.672 33.333 7.32 0.00 44.63 2.43
4439 4713 9.586435 CTTTCTTTTGAAACCATAGTCAAAACT 57.414 29.630 7.32 0.00 44.63 2.66
4440 4714 9.936759 TTTCTTTTGAAACCATAGTCAAAACTT 57.063 25.926 7.32 0.00 44.63 2.66
4441 4715 9.936759 TTCTTTTGAAACCATAGTCAAAACTTT 57.063 25.926 7.32 0.00 44.63 2.66
4446 4720 8.740123 TGAAACCATAGTCAAAACTTTACTCA 57.260 30.769 0.00 0.00 36.92 3.41
4447 4721 9.349713 TGAAACCATAGTCAAAACTTTACTCAT 57.650 29.630 0.00 0.00 36.92 2.90
4449 4723 9.965824 AAACCATAGTCAAAACTTTACTCATTG 57.034 29.630 0.00 0.00 36.92 2.82
4450 4724 8.110860 ACCATAGTCAAAACTTTACTCATTGG 57.889 34.615 0.00 0.00 36.92 3.16
4451 4725 7.942341 ACCATAGTCAAAACTTTACTCATTGGA 59.058 33.333 0.00 0.00 36.92 3.53
4452 4726 8.792633 CCATAGTCAAAACTTTACTCATTGGAA 58.207 33.333 0.00 0.00 36.92 3.53
4462 4736 8.918202 ACTTTACTCATTGGAAATAACAGTCA 57.082 30.769 0.00 0.00 0.00 3.41
4463 4737 8.784043 ACTTTACTCATTGGAAATAACAGTCAC 58.216 33.333 0.00 0.00 0.00 3.67
4464 4738 5.862924 ACTCATTGGAAATAACAGTCACG 57.137 39.130 0.00 0.00 0.00 4.35
4465 4739 5.305585 ACTCATTGGAAATAACAGTCACGT 58.694 37.500 0.00 0.00 0.00 4.49
4466 4740 5.408604 ACTCATTGGAAATAACAGTCACGTC 59.591 40.000 0.00 0.00 0.00 4.34
4467 4741 4.387559 TCATTGGAAATAACAGTCACGTCG 59.612 41.667 0.00 0.00 0.00 5.12
4468 4742 3.374220 TGGAAATAACAGTCACGTCGT 57.626 42.857 0.00 0.00 0.00 4.34
4469 4743 3.719924 TGGAAATAACAGTCACGTCGTT 58.280 40.909 0.00 0.00 0.00 3.85
4470 4744 4.121317 TGGAAATAACAGTCACGTCGTTT 58.879 39.130 0.00 0.00 0.00 3.60
4471 4745 5.288015 TGGAAATAACAGTCACGTCGTTTA 58.712 37.500 0.00 0.00 0.00 2.01
4472 4746 5.927689 TGGAAATAACAGTCACGTCGTTTAT 59.072 36.000 0.00 0.00 0.00 1.40
4473 4747 6.128769 TGGAAATAACAGTCACGTCGTTTATG 60.129 38.462 0.00 0.00 0.00 1.90
4474 4748 6.089820 GGAAATAACAGTCACGTCGTTTATGA 59.910 38.462 0.00 0.00 0.00 2.15
4475 4749 6.627690 AATAACAGTCACGTCGTTTATGAG 57.372 37.500 0.00 0.00 0.00 2.90
4476 4750 3.909776 ACAGTCACGTCGTTTATGAGA 57.090 42.857 0.00 0.00 0.00 3.27
4477 4751 4.233123 ACAGTCACGTCGTTTATGAGAA 57.767 40.909 0.00 0.00 0.00 2.87
4478 4752 4.227538 ACAGTCACGTCGTTTATGAGAAG 58.772 43.478 0.00 0.00 0.00 2.85
4479 4753 3.608506 CAGTCACGTCGTTTATGAGAAGG 59.391 47.826 0.00 0.00 0.00 3.46
4480 4754 2.921754 GTCACGTCGTTTATGAGAAGGG 59.078 50.000 0.00 0.00 0.00 3.95
4481 4755 2.094390 TCACGTCGTTTATGAGAAGGGG 60.094 50.000 0.00 0.00 0.00 4.79
4482 4756 1.897802 ACGTCGTTTATGAGAAGGGGT 59.102 47.619 0.00 0.00 0.00 4.95
4483 4757 3.091545 ACGTCGTTTATGAGAAGGGGTA 58.908 45.455 0.00 0.00 0.00 3.69
4484 4758 3.703052 ACGTCGTTTATGAGAAGGGGTAT 59.297 43.478 0.00 0.00 0.00 2.73
4485 4759 4.889409 ACGTCGTTTATGAGAAGGGGTATA 59.111 41.667 0.00 0.00 0.00 1.47
4486 4760 5.360714 ACGTCGTTTATGAGAAGGGGTATAA 59.639 40.000 0.00 0.00 0.00 0.98
4487 4761 6.041296 ACGTCGTTTATGAGAAGGGGTATAAT 59.959 38.462 0.00 0.00 0.00 1.28
4488 4762 6.927381 CGTCGTTTATGAGAAGGGGTATAATT 59.073 38.462 0.00 0.00 0.00 1.40
4489 4763 7.440255 CGTCGTTTATGAGAAGGGGTATAATTT 59.560 37.037 0.00 0.00 0.00 1.82
4490 4764 8.771766 GTCGTTTATGAGAAGGGGTATAATTTC 58.228 37.037 0.00 0.00 0.00 2.17
4491 4765 8.487848 TCGTTTATGAGAAGGGGTATAATTTCA 58.512 33.333 0.00 0.00 0.00 2.69
4492 4766 9.284968 CGTTTATGAGAAGGGGTATAATTTCAT 57.715 33.333 0.00 0.00 0.00 2.57
4495 4769 7.986085 ATGAGAAGGGGTATAATTTCATTCG 57.014 36.000 0.00 0.00 0.00 3.34
4496 4770 7.131907 TGAGAAGGGGTATAATTTCATTCGA 57.868 36.000 0.00 0.00 0.00 3.71
4497 4771 7.570132 TGAGAAGGGGTATAATTTCATTCGAA 58.430 34.615 0.00 0.00 0.00 3.71
4498 4772 7.715249 TGAGAAGGGGTATAATTTCATTCGAAG 59.285 37.037 3.35 0.00 31.28 3.79
4499 4773 6.998673 AGAAGGGGTATAATTTCATTCGAAGG 59.001 38.462 2.79 2.79 31.28 3.46
4500 4774 5.070685 AGGGGTATAATTTCATTCGAAGGC 58.929 41.667 4.63 0.00 31.28 4.35
4501 4775 5.070685 GGGGTATAATTTCATTCGAAGGCT 58.929 41.667 4.63 0.00 31.28 4.58
4502 4776 5.181433 GGGGTATAATTTCATTCGAAGGCTC 59.819 44.000 4.63 0.00 31.28 4.70
4503 4777 5.181433 GGGTATAATTTCATTCGAAGGCTCC 59.819 44.000 4.63 0.00 31.28 4.70
4504 4778 5.998363 GGTATAATTTCATTCGAAGGCTCCT 59.002 40.000 4.63 0.00 31.28 3.69
4505 4779 6.147985 GGTATAATTTCATTCGAAGGCTCCTC 59.852 42.308 4.63 0.00 31.28 3.71
4506 4780 3.634397 ATTTCATTCGAAGGCTCCTCA 57.366 42.857 4.63 0.00 31.28 3.86
4507 4781 3.417069 TTTCATTCGAAGGCTCCTCAA 57.583 42.857 4.63 0.00 31.28 3.02
4508 4782 3.417069 TTCATTCGAAGGCTCCTCAAA 57.583 42.857 4.63 0.00 0.00 2.69
4509 4783 2.699954 TCATTCGAAGGCTCCTCAAAC 58.300 47.619 4.63 0.00 0.00 2.93
4510 4784 1.740025 CATTCGAAGGCTCCTCAAACC 59.260 52.381 3.35 0.00 0.00 3.27
4511 4785 0.762418 TTCGAAGGCTCCTCAAACCA 59.238 50.000 0.00 0.00 0.00 3.67
4512 4786 0.762418 TCGAAGGCTCCTCAAACCAA 59.238 50.000 0.00 0.00 0.00 3.67
4513 4787 1.351017 TCGAAGGCTCCTCAAACCAAT 59.649 47.619 0.00 0.00 0.00 3.16
4514 4788 1.740025 CGAAGGCTCCTCAAACCAATC 59.260 52.381 0.00 0.00 0.00 2.67
4515 4789 1.740025 GAAGGCTCCTCAAACCAATCG 59.260 52.381 0.00 0.00 0.00 3.34
4516 4790 0.693049 AGGCTCCTCAAACCAATCGT 59.307 50.000 0.00 0.00 0.00 3.73
4517 4791 1.087501 GGCTCCTCAAACCAATCGTC 58.912 55.000 0.00 0.00 0.00 4.20
4518 4792 1.339151 GGCTCCTCAAACCAATCGTCT 60.339 52.381 0.00 0.00 0.00 4.18
4519 4793 2.093658 GGCTCCTCAAACCAATCGTCTA 60.094 50.000 0.00 0.00 0.00 2.59
4520 4794 3.596214 GCTCCTCAAACCAATCGTCTAA 58.404 45.455 0.00 0.00 0.00 2.10
4521 4795 4.000988 GCTCCTCAAACCAATCGTCTAAA 58.999 43.478 0.00 0.00 0.00 1.85
4522 4796 4.454504 GCTCCTCAAACCAATCGTCTAAAA 59.545 41.667 0.00 0.00 0.00 1.52
4523 4797 5.048991 GCTCCTCAAACCAATCGTCTAAAAA 60.049 40.000 0.00 0.00 0.00 1.94
4524 4798 6.554334 TCCTCAAACCAATCGTCTAAAAAG 57.446 37.500 0.00 0.00 0.00 2.27
4525 4799 6.292923 TCCTCAAACCAATCGTCTAAAAAGA 58.707 36.000 0.00 0.00 0.00 2.52
4526 4800 6.768861 TCCTCAAACCAATCGTCTAAAAAGAA 59.231 34.615 0.00 0.00 0.00 2.52
4527 4801 7.283580 TCCTCAAACCAATCGTCTAAAAAGAAA 59.716 33.333 0.00 0.00 0.00 2.52
4528 4802 7.918562 CCTCAAACCAATCGTCTAAAAAGAAAA 59.081 33.333 0.00 0.00 0.00 2.29
4529 4803 9.463443 CTCAAACCAATCGTCTAAAAAGAAAAT 57.537 29.630 0.00 0.00 0.00 1.82
4530 4804 9.458374 TCAAACCAATCGTCTAAAAAGAAAATC 57.542 29.630 0.00 0.00 0.00 2.17
4531 4805 9.463443 CAAACCAATCGTCTAAAAAGAAAATCT 57.537 29.630 0.00 0.00 0.00 2.40
4534 4808 8.451748 ACCAATCGTCTAAAAAGAAAATCTAGC 58.548 33.333 0.00 0.00 0.00 3.42
4535 4809 7.910683 CCAATCGTCTAAAAAGAAAATCTAGCC 59.089 37.037 0.00 0.00 0.00 3.93
4536 4810 8.450964 CAATCGTCTAAAAAGAAAATCTAGCCA 58.549 33.333 0.00 0.00 0.00 4.75
4537 4811 7.972832 TCGTCTAAAAAGAAAATCTAGCCAA 57.027 32.000 0.00 0.00 0.00 4.52
4538 4812 7.803724 TCGTCTAAAAAGAAAATCTAGCCAAC 58.196 34.615 0.00 0.00 0.00 3.77
4539 4813 7.021790 CGTCTAAAAAGAAAATCTAGCCAACC 58.978 38.462 0.00 0.00 0.00 3.77
4540 4814 7.308348 CGTCTAAAAAGAAAATCTAGCCAACCA 60.308 37.037 0.00 0.00 0.00 3.67
4541 4815 8.357402 GTCTAAAAAGAAAATCTAGCCAACCAA 58.643 33.333 0.00 0.00 0.00 3.67
4542 4816 8.576442 TCTAAAAAGAAAATCTAGCCAACCAAG 58.424 33.333 0.00 0.00 0.00 3.61
4543 4817 4.790765 AAGAAAATCTAGCCAACCAAGC 57.209 40.909 0.00 0.00 0.00 4.01
4544 4818 3.092301 AGAAAATCTAGCCAACCAAGCC 58.908 45.455 0.00 0.00 0.00 4.35
4545 4819 2.603075 AAATCTAGCCAACCAAGCCA 57.397 45.000 0.00 0.00 0.00 4.75
4546 4820 2.134789 AATCTAGCCAACCAAGCCAG 57.865 50.000 0.00 0.00 0.00 4.85
4547 4821 0.394899 ATCTAGCCAACCAAGCCAGC 60.395 55.000 0.00 0.00 0.00 4.85
4548 4822 1.001641 CTAGCCAACCAAGCCAGCT 60.002 57.895 0.00 0.00 37.58 4.24
4549 4823 1.002134 TAGCCAACCAAGCCAGCTC 60.002 57.895 0.00 0.00 35.03 4.09
4550 4824 1.778017 TAGCCAACCAAGCCAGCTCA 61.778 55.000 0.00 0.00 35.03 4.26
4551 4825 1.980772 GCCAACCAAGCCAGCTCAT 60.981 57.895 0.00 0.00 0.00 2.90
4552 4826 1.888018 CCAACCAAGCCAGCTCATG 59.112 57.895 0.00 0.00 0.00 3.07
4561 4835 3.202548 CCAGCTCATGGGCAATCTT 57.797 52.632 22.09 0.00 46.36 2.40
4562 4836 2.353357 CCAGCTCATGGGCAATCTTA 57.647 50.000 22.09 0.00 46.36 2.10
4563 4837 2.872732 CCAGCTCATGGGCAATCTTAT 58.127 47.619 22.09 0.00 46.36 1.73
4564 4838 3.228453 CCAGCTCATGGGCAATCTTATT 58.772 45.455 22.09 0.00 46.36 1.40
4565 4839 3.255149 CCAGCTCATGGGCAATCTTATTC 59.745 47.826 22.09 0.00 46.36 1.75
4566 4840 3.058432 CAGCTCATGGGCAATCTTATTCG 60.058 47.826 22.09 0.00 34.17 3.34
4567 4841 2.351157 GCTCATGGGCAATCTTATTCGC 60.351 50.000 14.19 0.00 0.00 4.70
4568 4842 2.227388 CTCATGGGCAATCTTATTCGCC 59.773 50.000 0.00 0.00 44.10 5.54
4569 4843 2.158623 TCATGGGCAATCTTATTCGCCT 60.159 45.455 0.00 0.00 44.27 5.52
4570 4844 1.967319 TGGGCAATCTTATTCGCCTC 58.033 50.000 0.00 0.00 44.27 4.70
4571 4845 1.490490 TGGGCAATCTTATTCGCCTCT 59.510 47.619 0.00 0.00 44.27 3.69
4572 4846 2.147150 GGGCAATCTTATTCGCCTCTC 58.853 52.381 0.00 0.00 44.27 3.20
4573 4847 2.224402 GGGCAATCTTATTCGCCTCTCT 60.224 50.000 0.00 0.00 44.27 3.10
4574 4848 3.006967 GGGCAATCTTATTCGCCTCTCTA 59.993 47.826 0.00 0.00 44.27 2.43
4575 4849 4.323104 GGGCAATCTTATTCGCCTCTCTAT 60.323 45.833 0.00 0.00 44.27 1.98
4576 4850 5.241662 GGCAATCTTATTCGCCTCTCTATT 58.758 41.667 0.00 0.00 41.50 1.73
4577 4851 6.398918 GGCAATCTTATTCGCCTCTCTATTA 58.601 40.000 0.00 0.00 41.50 0.98
4578 4852 6.311690 GGCAATCTTATTCGCCTCTCTATTAC 59.688 42.308 0.00 0.00 41.50 1.89
4579 4853 6.868864 GCAATCTTATTCGCCTCTCTATTACA 59.131 38.462 0.00 0.00 0.00 2.41
4580 4854 7.547370 GCAATCTTATTCGCCTCTCTATTACAT 59.453 37.037 0.00 0.00 0.00 2.29
4581 4855 8.867935 CAATCTTATTCGCCTCTCTATTACATG 58.132 37.037 0.00 0.00 0.00 3.21
4582 4856 6.390721 TCTTATTCGCCTCTCTATTACATGC 58.609 40.000 0.00 0.00 0.00 4.06
4583 4857 4.881019 ATTCGCCTCTCTATTACATGCT 57.119 40.909 0.00 0.00 0.00 3.79
4584 4858 3.924918 TCGCCTCTCTATTACATGCTC 57.075 47.619 0.00 0.00 0.00 4.26
4585 4859 2.226674 TCGCCTCTCTATTACATGCTCG 59.773 50.000 0.00 0.00 0.00 5.03
4586 4860 2.226674 CGCCTCTCTATTACATGCTCGA 59.773 50.000 0.00 0.00 0.00 4.04
4587 4861 3.304726 CGCCTCTCTATTACATGCTCGAA 60.305 47.826 0.00 0.00 0.00 3.71
4588 4862 3.984633 GCCTCTCTATTACATGCTCGAAC 59.015 47.826 0.00 0.00 0.00 3.95
4589 4863 4.551388 CCTCTCTATTACATGCTCGAACC 58.449 47.826 0.00 0.00 0.00 3.62
4590 4864 4.279671 CCTCTCTATTACATGCTCGAACCT 59.720 45.833 0.00 0.00 0.00 3.50
4591 4865 5.473846 CCTCTCTATTACATGCTCGAACCTA 59.526 44.000 0.00 0.00 0.00 3.08
4592 4866 6.348950 CCTCTCTATTACATGCTCGAACCTAG 60.349 46.154 0.00 0.00 0.00 3.02
4593 4867 5.048643 TCTCTATTACATGCTCGAACCTAGC 60.049 44.000 0.00 0.00 40.50 3.42
4599 4873 2.890808 TGCTCGAACCTAGCAATAGG 57.109 50.000 0.00 0.00 46.57 2.57
4600 4874 2.384828 TGCTCGAACCTAGCAATAGGA 58.615 47.619 8.29 0.00 46.57 2.94
4601 4875 2.764010 TGCTCGAACCTAGCAATAGGAA 59.236 45.455 8.29 0.00 46.57 3.36
4602 4876 3.196901 TGCTCGAACCTAGCAATAGGAAA 59.803 43.478 8.29 0.00 46.57 3.13
4603 4877 4.189231 GCTCGAACCTAGCAATAGGAAAA 58.811 43.478 8.29 0.00 39.60 2.29
4604 4878 4.634443 GCTCGAACCTAGCAATAGGAAAAA 59.366 41.667 8.29 0.00 39.60 1.94
4605 4879 5.297029 GCTCGAACCTAGCAATAGGAAAAAT 59.703 40.000 8.29 0.00 39.60 1.82
4606 4880 6.511929 GCTCGAACCTAGCAATAGGAAAAATC 60.512 42.308 8.29 0.00 39.60 2.17
4607 4881 6.411376 TCGAACCTAGCAATAGGAAAAATCA 58.589 36.000 8.29 0.00 39.60 2.57
4608 4882 7.054124 TCGAACCTAGCAATAGGAAAAATCAT 58.946 34.615 8.29 0.00 39.60 2.45
4609 4883 8.208224 TCGAACCTAGCAATAGGAAAAATCATA 58.792 33.333 8.29 0.00 39.60 2.15
4610 4884 8.836413 CGAACCTAGCAATAGGAAAAATCATAA 58.164 33.333 8.29 0.00 39.60 1.90
4612 4886 8.171164 ACCTAGCAATAGGAAAAATCATAAGC 57.829 34.615 8.29 0.00 39.60 3.09
4613 4887 7.231519 ACCTAGCAATAGGAAAAATCATAAGCC 59.768 37.037 8.29 0.00 39.60 4.35
4614 4888 7.231317 CCTAGCAATAGGAAAAATCATAAGCCA 59.769 37.037 0.00 0.00 39.60 4.75
4615 4889 7.422465 AGCAATAGGAAAAATCATAAGCCAA 57.578 32.000 0.00 0.00 0.00 4.52
4616 4890 7.850193 AGCAATAGGAAAAATCATAAGCCAAA 58.150 30.769 0.00 0.00 0.00 3.28
4617 4891 8.488668 AGCAATAGGAAAAATCATAAGCCAAAT 58.511 29.630 0.00 0.00 0.00 2.32
4618 4892 9.762933 GCAATAGGAAAAATCATAAGCCAAATA 57.237 29.630 0.00 0.00 0.00 1.40
4629 4903 9.777297 AATCATAAGCCAAATAAAAACAGTTGT 57.223 25.926 0.00 0.00 0.00 3.32
4654 4928 3.354089 AACAATTGTCAAGAACTGCCG 57.646 42.857 12.39 0.00 0.00 5.69
4655 4929 2.571212 ACAATTGTCAAGAACTGCCGA 58.429 42.857 4.92 0.00 0.00 5.54
4656 4930 2.290641 ACAATTGTCAAGAACTGCCGAC 59.709 45.455 4.92 0.00 0.00 4.79
4657 4931 1.523758 ATTGTCAAGAACTGCCGACC 58.476 50.000 0.00 0.00 0.00 4.79
4658 4932 0.878523 TTGTCAAGAACTGCCGACCG 60.879 55.000 0.00 0.00 0.00 4.79
4659 4933 2.357034 TCAAGAACTGCCGACCGC 60.357 61.111 0.00 0.00 38.31 5.68
4660 4934 3.777925 CAAGAACTGCCGACCGCG 61.778 66.667 0.00 0.00 42.08 6.46
4671 4945 4.549516 GACCGCGCTCCCGTAGAC 62.550 72.222 5.56 0.00 36.67 2.59
4675 4949 4.549516 GCGCTCCCGTAGACCGTC 62.550 72.222 0.00 0.00 36.67 4.79
4676 4950 3.885521 CGCTCCCGTAGACCGTCC 61.886 72.222 0.00 0.00 33.66 4.79
4677 4951 2.439883 GCTCCCGTAGACCGTCCT 60.440 66.667 0.00 0.00 33.66 3.85
4678 4952 2.479750 GCTCCCGTAGACCGTCCTC 61.480 68.421 0.00 0.00 33.66 3.71
4679 4953 1.823041 CTCCCGTAGACCGTCCTCC 60.823 68.421 0.00 0.00 33.66 4.30
4680 4954 2.832201 CCCGTAGACCGTCCTCCC 60.832 72.222 0.00 0.00 33.66 4.30
4681 4955 2.274760 CCGTAGACCGTCCTCCCT 59.725 66.667 0.00 0.00 33.66 4.20
4682 4956 1.823041 CCGTAGACCGTCCTCCCTC 60.823 68.421 0.00 0.00 33.66 4.30
4683 4957 1.823041 CGTAGACCGTCCTCCCTCC 60.823 68.421 0.00 0.00 0.00 4.30
4684 4958 1.614160 GTAGACCGTCCTCCCTCCT 59.386 63.158 0.00 0.00 0.00 3.69
4685 4959 0.033306 GTAGACCGTCCTCCCTCCTT 60.033 60.000 0.00 0.00 0.00 3.36
4686 4960 0.258194 TAGACCGTCCTCCCTCCTTC 59.742 60.000 0.00 0.00 0.00 3.46
4687 4961 1.305046 GACCGTCCTCCCTCCTTCA 60.305 63.158 0.00 0.00 0.00 3.02
4688 4962 0.688087 GACCGTCCTCCCTCCTTCAT 60.688 60.000 0.00 0.00 0.00 2.57
4689 4963 0.978146 ACCGTCCTCCCTCCTTCATG 60.978 60.000 0.00 0.00 0.00 3.07
4690 4964 1.690219 CCGTCCTCCCTCCTTCATGG 61.690 65.000 0.00 0.00 37.10 3.66
4691 4965 0.978146 CGTCCTCCCTCCTTCATGGT 60.978 60.000 0.00 0.00 37.07 3.55
4692 4966 0.543749 GTCCTCCCTCCTTCATGGTG 59.456 60.000 0.00 0.00 37.07 4.17
4693 4967 0.119155 TCCTCCCTCCTTCATGGTGT 59.881 55.000 0.00 0.00 37.07 4.16
4694 4968 1.364678 TCCTCCCTCCTTCATGGTGTA 59.635 52.381 0.00 0.00 37.07 2.90
4695 4969 1.765314 CCTCCCTCCTTCATGGTGTAG 59.235 57.143 0.00 0.00 37.07 2.74
4696 4970 2.626950 CCTCCCTCCTTCATGGTGTAGA 60.627 54.545 0.00 0.00 37.07 2.59
4697 4971 3.312890 CTCCCTCCTTCATGGTGTAGAT 58.687 50.000 0.00 0.00 37.07 1.98
4698 4972 3.041211 TCCCTCCTTCATGGTGTAGATG 58.959 50.000 0.00 0.00 37.07 2.90
4699 4973 3.041211 CCCTCCTTCATGGTGTAGATGA 58.959 50.000 0.00 0.00 37.07 2.92
4700 4974 3.649981 CCCTCCTTCATGGTGTAGATGAT 59.350 47.826 0.00 0.00 37.07 2.45
4701 4975 4.504514 CCCTCCTTCATGGTGTAGATGATG 60.505 50.000 0.00 0.00 37.07 3.07
4702 4976 4.063689 CTCCTTCATGGTGTAGATGATGC 58.936 47.826 0.00 0.00 37.07 3.91
4703 4977 3.144506 CCTTCATGGTGTAGATGATGCC 58.855 50.000 0.00 0.00 29.96 4.40
4704 4978 3.181447 CCTTCATGGTGTAGATGATGCCT 60.181 47.826 0.00 0.00 29.96 4.75
4705 4979 3.758755 TCATGGTGTAGATGATGCCTC 57.241 47.619 0.00 0.00 0.00 4.70
4706 4980 3.040477 TCATGGTGTAGATGATGCCTCA 58.960 45.455 0.00 0.00 35.41 3.86
4707 4981 2.988010 TGGTGTAGATGATGCCTCAC 57.012 50.000 0.00 0.00 33.22 3.51
4708 4982 1.136891 TGGTGTAGATGATGCCTCACG 59.863 52.381 0.00 0.00 33.22 4.35
4709 4983 1.212616 GTGTAGATGATGCCTCACGC 58.787 55.000 0.00 0.00 33.22 5.34
4710 4984 0.249031 TGTAGATGATGCCTCACGCG 60.249 55.000 3.53 3.53 42.08 6.01
4711 4985 0.249073 GTAGATGATGCCTCACGCGT 60.249 55.000 5.58 5.58 42.08 6.01
4712 4986 0.459899 TAGATGATGCCTCACGCGTT 59.540 50.000 10.22 0.00 42.08 4.84
4713 4987 1.086067 AGATGATGCCTCACGCGTTG 61.086 55.000 10.22 5.37 42.08 4.10
4714 4988 1.361668 GATGATGCCTCACGCGTTGT 61.362 55.000 10.22 0.00 42.08 3.32
4715 4989 0.955428 ATGATGCCTCACGCGTTGTT 60.955 50.000 10.22 0.00 42.08 2.83
4716 4990 1.154413 GATGCCTCACGCGTTGTTG 60.154 57.895 10.22 0.00 42.08 3.33
4717 4991 3.254014 ATGCCTCACGCGTTGTTGC 62.254 57.895 10.22 11.10 42.08 4.17
4718 4992 4.683334 GCCTCACGCGTTGTTGCC 62.683 66.667 10.22 0.00 0.00 4.52
4719 4993 4.368808 CCTCACGCGTTGTTGCCG 62.369 66.667 10.22 0.00 0.00 5.69
4720 4994 4.368808 CTCACGCGTTGTTGCCGG 62.369 66.667 10.22 0.00 0.00 6.13
4721 4995 4.893601 TCACGCGTTGTTGCCGGA 62.894 61.111 10.22 0.00 0.00 5.14
4722 4996 3.943034 CACGCGTTGTTGCCGGAA 61.943 61.111 10.22 0.00 0.00 4.30
4723 4997 3.944233 ACGCGTTGTTGCCGGAAC 61.944 61.111 5.58 7.79 34.84 3.62
4724 4998 3.645975 CGCGTTGTTGCCGGAACT 61.646 61.111 5.05 0.00 35.37 3.01
4725 4999 2.719354 GCGTTGTTGCCGGAACTT 59.281 55.556 5.05 0.00 35.37 2.66
4726 5000 1.065109 GCGTTGTTGCCGGAACTTT 59.935 52.632 5.05 0.00 35.37 2.66
4727 5001 1.206115 GCGTTGTTGCCGGAACTTTG 61.206 55.000 5.05 2.50 35.37 2.77
4728 5002 0.099791 CGTTGTTGCCGGAACTTTGT 59.900 50.000 5.05 0.00 35.37 2.83
4729 5003 1.468395 CGTTGTTGCCGGAACTTTGTT 60.468 47.619 5.05 0.00 35.37 2.83
4730 5004 2.223294 CGTTGTTGCCGGAACTTTGTTA 60.223 45.455 5.05 0.00 35.37 2.41
4731 5005 3.731264 CGTTGTTGCCGGAACTTTGTTAA 60.731 43.478 5.05 0.00 35.37 2.01
4732 5006 4.174762 GTTGTTGCCGGAACTTTGTTAAA 58.825 39.130 5.05 0.00 35.37 1.52
4733 5007 4.035278 TGTTGCCGGAACTTTGTTAAAG 57.965 40.909 5.05 0.05 44.10 1.85
4734 5008 3.695060 TGTTGCCGGAACTTTGTTAAAGA 59.305 39.130 5.05 0.00 41.02 2.52
4735 5009 4.158025 TGTTGCCGGAACTTTGTTAAAGAA 59.842 37.500 5.05 0.00 41.02 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
246 254 4.748701 TGTAAGTACCCTTGTCCTTCTCT 58.251 43.478 0.00 0.00 31.89 3.10
250 258 2.976882 TGCTGTAAGTACCCTTGTCCTT 59.023 45.455 0.00 0.00 35.30 3.36
779 833 3.202906 GCACAGAAGTACCACAGTTCAA 58.797 45.455 0.00 0.00 38.82 2.69
784 839 4.997395 AGTTAATGCACAGAAGTACCACAG 59.003 41.667 0.00 0.00 0.00 3.66
802 857 6.153510 TGCTGCTAGATTGAGAAGAGAGTTAA 59.846 38.462 0.00 0.00 0.00 2.01
806 861 4.652421 TGCTGCTAGATTGAGAAGAGAG 57.348 45.455 0.00 0.00 0.00 3.20
807 862 5.174395 GTTTGCTGCTAGATTGAGAAGAGA 58.826 41.667 0.00 0.00 0.00 3.10
808 863 4.934001 TGTTTGCTGCTAGATTGAGAAGAG 59.066 41.667 0.00 0.00 0.00 2.85
926 992 3.636231 TTGACCTGGGTGGAGCGG 61.636 66.667 0.00 0.00 39.71 5.52
1050 1131 3.039526 AGGAGGGGGAGGAGGAGG 61.040 72.222 0.00 0.00 0.00 4.30
1051 1132 2.612251 GAGGAGGGGGAGGAGGAG 59.388 72.222 0.00 0.00 0.00 3.69
1052 1133 3.036959 GGAGGAGGGGGAGGAGGA 61.037 72.222 0.00 0.00 0.00 3.71
1053 1134 3.039526 AGGAGGAGGGGGAGGAGG 61.040 72.222 0.00 0.00 0.00 4.30
1061 1142 3.151022 GCGGTGAGAGGAGGAGGG 61.151 72.222 0.00 0.00 0.00 4.30
1167 1248 1.137513 CGTTGTTGGACTCGAGGAAC 58.862 55.000 18.41 15.81 0.00 3.62
1698 1779 4.052229 ACGAACAGCCCCGACGAG 62.052 66.667 0.00 0.00 0.00 4.18
1869 1950 4.070552 GGGAGCTCGCAGTCGGTT 62.071 66.667 24.65 0.00 36.13 4.44
2049 2133 2.418334 GGCGAGGTAAGAAACGGAAGAT 60.418 50.000 0.00 0.00 0.00 2.40
2052 2136 0.037046 GGGCGAGGTAAGAAACGGAA 60.037 55.000 0.00 0.00 0.00 4.30
2178 2262 0.038526 AGTTGTCGTGGAAGTAGCCG 60.039 55.000 0.00 0.00 0.00 5.52
2283 2367 2.546778 GTCGCCGAATTGATGGTCTTA 58.453 47.619 0.00 0.00 0.00 2.10
2289 2373 0.933097 CTCTGGTCGCCGAATTGATG 59.067 55.000 0.00 0.00 0.00 3.07
2313 2397 2.161609 CGAAGAGCCGCCTTTGTTATTT 59.838 45.455 0.00 0.00 0.00 1.40
2316 2400 0.034337 ACGAAGAGCCGCCTTTGTTA 59.966 50.000 8.08 0.00 37.46 2.41
2355 2439 2.684374 TGCAACACATGGCAGTATGATC 59.316 45.455 0.00 0.00 39.69 2.92
2367 2451 1.949525 AGAAGAAACGCTGCAACACAT 59.050 42.857 0.00 0.00 0.00 3.21
2370 2454 1.662517 TGAGAAGAAACGCTGCAACA 58.337 45.000 0.00 0.00 0.00 3.33
2392 2476 0.029035 GAGTACCATGCGACGACGAT 59.971 55.000 12.29 0.00 42.66 3.73
2397 2481 0.731514 ACAACGAGTACCATGCGACG 60.732 55.000 0.00 0.00 0.00 5.12
2400 2484 0.669318 ACCACAACGAGTACCATGCG 60.669 55.000 0.00 0.00 0.00 4.73
2412 2496 1.002544 CTCTTCCTCCTCCACCACAAC 59.997 57.143 0.00 0.00 0.00 3.32
2470 2554 2.491693 GGCCCAAATTCACATTCTTCGA 59.508 45.455 0.00 0.00 0.00 3.71
2513 2597 2.049475 ATCCTCGTCGTAGCTCGTGC 62.049 60.000 0.07 0.07 40.80 5.34
2715 2799 3.249189 AACTCCCGCTTGGCCTGA 61.249 61.111 3.32 0.00 0.00 3.86
2847 2934 1.805539 CAGCGATCGGTCAAGCGAA 60.806 57.895 18.38 0.00 34.34 4.70
3156 3267 1.080705 GCCGAAGCTGTACACGTCT 60.081 57.895 0.00 0.00 35.50 4.18
3666 3786 2.718073 GGTAGCCGACGTGGACCAT 61.718 63.158 0.00 0.00 42.00 3.55
3704 3824 0.943835 CGACGTGTCCTGCAATGACA 60.944 55.000 13.22 13.22 39.20 3.58
3705 3825 1.626654 CCGACGTGTCCTGCAATGAC 61.627 60.000 0.00 8.69 31.62 3.06
3753 3886 1.395045 CCACGCCATAGGAGCTGAGA 61.395 60.000 0.00 0.00 0.00 3.27
3754 3887 1.068753 CCACGCCATAGGAGCTGAG 59.931 63.158 0.00 0.00 0.00 3.35
3851 3989 2.748465 GCCGTGTCCCTTGCCTAATTAT 60.748 50.000 0.00 0.00 0.00 1.28
3862 4000 0.683504 CTACTACCTGCCGTGTCCCT 60.684 60.000 0.00 0.00 0.00 4.20
3915 4053 7.385752 CCAAATGCAACTTGTTTATCATCTGTT 59.614 33.333 10.12 0.00 0.00 3.16
3945 4083 0.321919 TGCACAGCTGACCCTGATTC 60.322 55.000 23.35 0.00 36.67 2.52
3951 4089 0.819259 TTGAACTGCACAGCTGACCC 60.819 55.000 23.35 8.37 0.00 4.46
3979 4117 8.198778 TCTGTTTGTAACTAGTGTGACAATACA 58.801 33.333 15.26 17.41 44.48 2.29
3980 4118 8.485591 GTCTGTTTGTAACTAGTGTGACAATAC 58.514 37.037 15.26 15.12 44.48 1.89
3987 4125 4.613944 TCCGTCTGTTTGTAACTAGTGTG 58.386 43.478 0.00 0.00 0.00 3.82
3993 4131 4.696402 TGTTGTTTCCGTCTGTTTGTAACT 59.304 37.500 0.00 0.00 0.00 2.24
3995 4133 5.624344 TTGTTGTTTCCGTCTGTTTGTAA 57.376 34.783 0.00 0.00 0.00 2.41
4035 4173 8.296713 TGTTATACTGGCTTTGAAAATTCTGTC 58.703 33.333 0.00 0.00 0.00 3.51
4063 4201 4.872124 ACCGATCCTTTATCCGTTGTTAAC 59.128 41.667 0.00 0.00 0.00 2.01
4064 4202 5.088680 ACCGATCCTTTATCCGTTGTTAA 57.911 39.130 0.00 0.00 0.00 2.01
4065 4203 4.741321 ACCGATCCTTTATCCGTTGTTA 57.259 40.909 0.00 0.00 0.00 2.41
4068 4206 5.353938 TCTTAACCGATCCTTTATCCGTTG 58.646 41.667 0.00 0.00 36.89 4.10
4071 4209 5.813672 TGTTTCTTAACCGATCCTTTATCCG 59.186 40.000 0.00 0.00 33.15 4.18
4073 4211 7.639945 CCATGTTTCTTAACCGATCCTTTATC 58.360 38.462 0.00 0.00 33.15 1.75
4074 4212 6.039382 GCCATGTTTCTTAACCGATCCTTTAT 59.961 38.462 0.00 0.00 33.15 1.40
4077 4215 3.694566 GCCATGTTTCTTAACCGATCCTT 59.305 43.478 0.00 0.00 33.15 3.36
4078 4216 3.279434 GCCATGTTTCTTAACCGATCCT 58.721 45.455 0.00 0.00 33.15 3.24
4079 4217 2.031683 CGCCATGTTTCTTAACCGATCC 59.968 50.000 0.00 0.00 33.15 3.36
4080 4218 2.933906 TCGCCATGTTTCTTAACCGATC 59.066 45.455 0.00 0.00 33.15 3.69
4083 4221 1.396996 CCTCGCCATGTTTCTTAACCG 59.603 52.381 0.00 0.00 33.15 4.44
4142 4405 4.488879 CCAAACCTAGAGAATGCAAAAGC 58.511 43.478 0.00 0.00 0.00 3.51
4146 4409 3.084039 CTGCCAAACCTAGAGAATGCAA 58.916 45.455 0.00 0.00 0.00 4.08
4150 4413 3.054139 TGCATCTGCCAAACCTAGAGAAT 60.054 43.478 0.00 0.00 41.18 2.40
4198 4461 7.418483 GGTGGGGCTGCTAATCAAATTAATTAA 60.418 37.037 0.01 0.00 0.00 1.40
4223 4486 5.200368 AGATGTTTAAACAAACTGCCTGG 57.800 39.130 23.97 0.00 43.03 4.45
4230 4493 7.356154 CGTTTAGTGCGAGATGTTTAAACAAAC 60.356 37.037 23.97 19.38 43.03 2.93
4232 4495 6.130723 CGTTTAGTGCGAGATGTTTAAACAA 58.869 36.000 23.97 8.78 43.03 2.83
4242 4505 4.570772 ACATTATTGCGTTTAGTGCGAGAT 59.429 37.500 0.00 0.00 34.24 2.75
4249 4512 6.018994 GCTAGTGCTACATTATTGCGTTTAGT 60.019 38.462 0.00 0.00 36.03 2.24
4250 4513 6.019075 TGCTAGTGCTACATTATTGCGTTTAG 60.019 38.462 0.00 0.00 40.48 1.85
4272 4546 0.039074 CCTCGTTGACTCGAAGTGCT 60.039 55.000 0.00 0.00 39.34 4.40
4279 4553 0.811915 AGGACATCCTCGTTGACTCG 59.188 55.000 0.00 0.00 44.77 4.18
4297 4571 2.223444 CGTAGACGACGCGATATTCAG 58.777 52.381 15.93 0.00 46.27 3.02
4324 4598 3.864243 ACAACCTCGTTGACAACTTACA 58.136 40.909 16.02 0.00 45.28 2.41
4325 4599 3.246936 GGACAACCTCGTTGACAACTTAC 59.753 47.826 16.02 2.51 45.28 2.34
4326 4600 3.133362 AGGACAACCTCGTTGACAACTTA 59.867 43.478 16.02 3.73 45.28 2.24
4327 4601 2.093128 AGGACAACCTCGTTGACAACTT 60.093 45.455 16.02 1.01 45.28 2.66
4328 4602 1.485066 AGGACAACCTCGTTGACAACT 59.515 47.619 16.02 0.00 45.28 3.16
4329 4603 1.597663 CAGGACAACCTCGTTGACAAC 59.402 52.381 11.29 8.34 45.28 3.32
4330 4604 1.483004 TCAGGACAACCTCGTTGACAA 59.517 47.619 11.29 0.00 45.28 3.18
4331 4605 1.116308 TCAGGACAACCTCGTTGACA 58.884 50.000 11.29 0.00 45.28 3.58
4332 4606 2.234300 TTCAGGACAACCTCGTTGAC 57.766 50.000 11.29 5.12 45.28 3.18
4333 4607 4.819105 ATATTCAGGACAACCTCGTTGA 57.181 40.909 11.29 0.00 45.28 3.18
4334 4608 5.005394 CGTAATATTCAGGACAACCTCGTTG 59.995 44.000 3.03 3.03 45.94 4.10
4335 4609 5.105635 TCGTAATATTCAGGACAACCTCGTT 60.106 40.000 0.00 0.00 45.94 3.85
4336 4610 4.400251 TCGTAATATTCAGGACAACCTCGT 59.600 41.667 0.00 0.00 45.94 4.18
4337 4611 4.928601 TCGTAATATTCAGGACAACCTCG 58.071 43.478 0.00 0.00 45.94 4.63
4338 4612 5.068723 TCCTCGTAATATTCAGGACAACCTC 59.931 44.000 6.62 0.00 45.94 3.85
4340 4614 5.272283 TCCTCGTAATATTCAGGACAACC 57.728 43.478 6.62 0.00 29.57 3.77
4341 4615 4.745620 GCTCCTCGTAATATTCAGGACAAC 59.254 45.833 6.62 0.00 31.45 3.32
4342 4616 4.404394 TGCTCCTCGTAATATTCAGGACAA 59.596 41.667 6.62 0.00 31.45 3.18
4343 4617 3.958147 TGCTCCTCGTAATATTCAGGACA 59.042 43.478 6.62 7.44 31.45 4.02
4344 4618 4.585955 TGCTCCTCGTAATATTCAGGAC 57.414 45.455 6.62 5.67 31.45 3.85
4345 4619 5.601662 CTTTGCTCCTCGTAATATTCAGGA 58.398 41.667 9.36 9.36 33.79 3.86
4346 4620 4.212214 GCTTTGCTCCTCGTAATATTCAGG 59.788 45.833 0.00 0.00 0.00 3.86
4347 4621 5.050499 CAGCTTTGCTCCTCGTAATATTCAG 60.050 44.000 0.00 0.00 36.40 3.02
4348 4622 4.811024 CAGCTTTGCTCCTCGTAATATTCA 59.189 41.667 0.00 0.00 36.40 2.57
4349 4623 4.212214 CCAGCTTTGCTCCTCGTAATATTC 59.788 45.833 0.00 0.00 36.40 1.75
4350 4624 4.130118 CCAGCTTTGCTCCTCGTAATATT 58.870 43.478 0.00 0.00 36.40 1.28
4351 4625 3.733337 CCAGCTTTGCTCCTCGTAATAT 58.267 45.455 0.00 0.00 36.40 1.28
4352 4626 2.741878 GCCAGCTTTGCTCCTCGTAATA 60.742 50.000 0.00 0.00 36.40 0.98
4353 4627 2.014068 GCCAGCTTTGCTCCTCGTAAT 61.014 52.381 0.00 0.00 36.40 1.89
4354 4628 0.673644 GCCAGCTTTGCTCCTCGTAA 60.674 55.000 0.00 0.00 36.40 3.18
4355 4629 1.079127 GCCAGCTTTGCTCCTCGTA 60.079 57.895 0.00 0.00 36.40 3.43
4356 4630 2.359230 GCCAGCTTTGCTCCTCGT 60.359 61.111 0.00 0.00 36.40 4.18
4357 4631 2.046507 AGCCAGCTTTGCTCCTCG 60.047 61.111 1.60 0.00 36.40 4.63
4358 4632 2.698763 GCAGCCAGCTTTGCTCCTC 61.699 63.158 4.52 0.00 36.40 3.71
4359 4633 2.675772 GCAGCCAGCTTTGCTCCT 60.676 61.111 4.52 0.00 36.40 3.69
4360 4634 4.112341 CGCAGCCAGCTTTGCTCC 62.112 66.667 4.52 0.00 42.61 4.70
4361 4635 3.036783 CTCGCAGCCAGCTTTGCTC 62.037 63.158 4.52 0.75 42.61 4.26
4362 4636 3.054503 CTCGCAGCCAGCTTTGCT 61.055 61.111 11.53 7.27 42.61 3.91
4363 4637 3.052082 TCTCGCAGCCAGCTTTGC 61.052 61.111 4.86 4.86 42.61 3.68
4364 4638 1.633852 GAGTCTCGCAGCCAGCTTTG 61.634 60.000 0.00 0.00 42.61 2.77
4365 4639 1.375268 GAGTCTCGCAGCCAGCTTT 60.375 57.895 0.00 0.00 42.61 3.51
4366 4640 2.104572 TTGAGTCTCGCAGCCAGCTT 62.105 55.000 0.00 0.00 42.61 3.74
4367 4641 2.104572 TTTGAGTCTCGCAGCCAGCT 62.105 55.000 0.00 0.00 42.61 4.24
4368 4642 1.023513 ATTTGAGTCTCGCAGCCAGC 61.024 55.000 0.00 0.00 40.87 4.85
4369 4643 1.005340 GATTTGAGTCTCGCAGCCAG 58.995 55.000 0.00 0.00 0.00 4.85
4370 4644 0.610174 AGATTTGAGTCTCGCAGCCA 59.390 50.000 0.00 0.00 0.00 4.75
4371 4645 1.285578 GAGATTTGAGTCTCGCAGCC 58.714 55.000 0.00 0.00 35.70 4.85
4372 4646 1.925847 CTGAGATTTGAGTCTCGCAGC 59.074 52.381 0.00 0.00 46.04 5.25
4373 4647 3.229276 ACTGAGATTTGAGTCTCGCAG 57.771 47.619 9.21 9.21 46.04 5.18
4374 4648 3.426292 CGTACTGAGATTTGAGTCTCGCA 60.426 47.826 0.00 0.00 46.04 5.10
4375 4649 3.102276 CGTACTGAGATTTGAGTCTCGC 58.898 50.000 0.00 0.00 46.04 5.03
4376 4650 4.092120 CACGTACTGAGATTTGAGTCTCG 58.908 47.826 0.00 0.00 46.04 4.04
4377 4651 3.854809 GCACGTACTGAGATTTGAGTCTC 59.145 47.826 0.00 0.00 43.90 3.36
4378 4652 3.255888 TGCACGTACTGAGATTTGAGTCT 59.744 43.478 0.00 0.00 0.00 3.24
4379 4653 3.575630 TGCACGTACTGAGATTTGAGTC 58.424 45.455 0.00 0.00 0.00 3.36
4380 4654 3.660501 TGCACGTACTGAGATTTGAGT 57.339 42.857 0.00 0.00 0.00 3.41
4381 4655 3.990469 ACTTGCACGTACTGAGATTTGAG 59.010 43.478 0.00 0.00 0.00 3.02
4382 4656 3.990092 ACTTGCACGTACTGAGATTTGA 58.010 40.909 0.00 0.00 0.00 2.69
4383 4657 4.024893 ACAACTTGCACGTACTGAGATTTG 60.025 41.667 0.00 0.00 0.00 2.32
4384 4658 4.127171 ACAACTTGCACGTACTGAGATTT 58.873 39.130 0.00 0.00 0.00 2.17
4385 4659 3.728845 ACAACTTGCACGTACTGAGATT 58.271 40.909 0.00 0.00 0.00 2.40
4386 4660 3.386768 ACAACTTGCACGTACTGAGAT 57.613 42.857 0.00 0.00 0.00 2.75
4387 4661 2.882927 ACAACTTGCACGTACTGAGA 57.117 45.000 0.00 0.00 0.00 3.27
4388 4662 4.666655 GCATTACAACTTGCACGTACTGAG 60.667 45.833 0.00 0.00 38.72 3.35
4389 4663 3.185594 GCATTACAACTTGCACGTACTGA 59.814 43.478 0.00 0.00 38.72 3.41
4390 4664 3.479006 GCATTACAACTTGCACGTACTG 58.521 45.455 0.00 0.00 38.72 2.74
4391 4665 2.156891 CGCATTACAACTTGCACGTACT 59.843 45.455 0.00 0.00 38.80 2.73
4392 4666 2.492001 CGCATTACAACTTGCACGTAC 58.508 47.619 0.00 0.00 38.80 3.67
4393 4667 1.136197 GCGCATTACAACTTGCACGTA 60.136 47.619 0.30 0.00 38.80 3.57
4394 4668 0.385473 GCGCATTACAACTTGCACGT 60.385 50.000 0.30 0.00 38.80 4.49
4395 4669 0.110238 AGCGCATTACAACTTGCACG 60.110 50.000 11.47 0.00 38.80 5.34
4396 4670 2.050477 AAGCGCATTACAACTTGCAC 57.950 45.000 11.47 0.00 38.80 4.57
4397 4671 2.293122 AGAAAGCGCATTACAACTTGCA 59.707 40.909 11.47 0.00 38.80 4.08
4398 4672 2.933769 AGAAAGCGCATTACAACTTGC 58.066 42.857 11.47 0.00 35.50 4.01
4399 4673 5.458452 TCAAAAGAAAGCGCATTACAACTTG 59.542 36.000 11.47 4.66 0.00 3.16
4400 4674 5.587289 TCAAAAGAAAGCGCATTACAACTT 58.413 33.333 11.47 0.09 0.00 2.66
4401 4675 5.181690 TCAAAAGAAAGCGCATTACAACT 57.818 34.783 11.47 0.00 0.00 3.16
4402 4676 5.881637 TTCAAAAGAAAGCGCATTACAAC 57.118 34.783 11.47 0.00 0.00 3.32
4403 4677 5.233263 GGTTTCAAAAGAAAGCGCATTACAA 59.767 36.000 11.47 0.00 33.74 2.41
4404 4678 4.742659 GGTTTCAAAAGAAAGCGCATTACA 59.257 37.500 11.47 0.00 33.74 2.41
4405 4679 4.742659 TGGTTTCAAAAGAAAGCGCATTAC 59.257 37.500 11.47 0.00 43.20 1.89
4406 4680 4.938080 TGGTTTCAAAAGAAAGCGCATTA 58.062 34.783 11.47 0.00 43.20 1.90
4407 4681 3.791245 TGGTTTCAAAAGAAAGCGCATT 58.209 36.364 11.47 2.75 43.20 3.56
4408 4682 3.451141 TGGTTTCAAAAGAAAGCGCAT 57.549 38.095 11.47 0.00 43.20 4.73
4409 4683 2.949451 TGGTTTCAAAAGAAAGCGCA 57.051 40.000 11.47 0.00 43.20 6.09
4410 4684 4.546570 ACTATGGTTTCAAAAGAAAGCGC 58.453 39.130 0.00 0.00 43.20 5.92
4411 4685 5.757886 TGACTATGGTTTCAAAAGAAAGCG 58.242 37.500 13.35 4.56 43.20 4.68
4412 4686 8.328146 GTTTTGACTATGGTTTCAAAAGAAAGC 58.672 33.333 11.87 11.87 46.94 3.51
4413 4687 9.586435 AGTTTTGACTATGGTTTCAAAAGAAAG 57.414 29.630 9.21 0.00 46.94 2.62
4414 4688 9.936759 AAGTTTTGACTATGGTTTCAAAAGAAA 57.063 25.926 9.21 0.00 46.94 2.52
4415 4689 9.936759 AAAGTTTTGACTATGGTTTCAAAAGAA 57.063 25.926 9.21 0.00 46.94 2.52
4420 4694 9.179909 TGAGTAAAGTTTTGACTATGGTTTCAA 57.820 29.630 0.00 0.00 0.00 2.69
4421 4695 8.740123 TGAGTAAAGTTTTGACTATGGTTTCA 57.260 30.769 0.00 0.00 0.00 2.69
4423 4697 9.965824 CAATGAGTAAAGTTTTGACTATGGTTT 57.034 29.630 0.00 0.00 0.00 3.27
4424 4698 8.576442 CCAATGAGTAAAGTTTTGACTATGGTT 58.424 33.333 0.00 0.00 0.00 3.67
4425 4699 7.942341 TCCAATGAGTAAAGTTTTGACTATGGT 59.058 33.333 12.60 0.00 0.00 3.55
4426 4700 8.335532 TCCAATGAGTAAAGTTTTGACTATGG 57.664 34.615 0.00 2.94 0.00 2.74
4436 4710 9.349713 TGACTGTTATTTCCAATGAGTAAAGTT 57.650 29.630 0.00 0.00 0.00 2.66
4437 4711 8.784043 GTGACTGTTATTTCCAATGAGTAAAGT 58.216 33.333 0.00 0.00 0.00 2.66
4438 4712 7.957484 CGTGACTGTTATTTCCAATGAGTAAAG 59.043 37.037 0.00 0.00 0.00 1.85
4439 4713 7.442969 ACGTGACTGTTATTTCCAATGAGTAAA 59.557 33.333 0.00 0.00 0.00 2.01
4440 4714 6.932400 ACGTGACTGTTATTTCCAATGAGTAA 59.068 34.615 0.00 0.00 0.00 2.24
4441 4715 6.460781 ACGTGACTGTTATTTCCAATGAGTA 58.539 36.000 0.00 0.00 0.00 2.59
4442 4716 5.305585 ACGTGACTGTTATTTCCAATGAGT 58.694 37.500 0.00 0.00 0.00 3.41
4443 4717 5.444613 CGACGTGACTGTTATTTCCAATGAG 60.445 44.000 0.00 0.00 0.00 2.90
4444 4718 4.387559 CGACGTGACTGTTATTTCCAATGA 59.612 41.667 0.00 0.00 0.00 2.57
4445 4719 4.151689 ACGACGTGACTGTTATTTCCAATG 59.848 41.667 0.00 0.00 0.00 2.82
4446 4720 4.312443 ACGACGTGACTGTTATTTCCAAT 58.688 39.130 0.00 0.00 0.00 3.16
4447 4721 3.719924 ACGACGTGACTGTTATTTCCAA 58.280 40.909 0.00 0.00 0.00 3.53
4448 4722 3.374220 ACGACGTGACTGTTATTTCCA 57.626 42.857 0.00 0.00 0.00 3.53
4449 4723 4.720530 AAACGACGTGACTGTTATTTCC 57.279 40.909 0.00 0.00 0.00 3.13
4450 4724 7.041187 TCATAAACGACGTGACTGTTATTTC 57.959 36.000 0.00 0.00 0.00 2.17
4451 4725 6.864685 TCTCATAAACGACGTGACTGTTATTT 59.135 34.615 0.00 0.00 0.00 1.40
4452 4726 6.384224 TCTCATAAACGACGTGACTGTTATT 58.616 36.000 0.00 0.00 0.00 1.40
4453 4727 5.946298 TCTCATAAACGACGTGACTGTTAT 58.054 37.500 0.00 0.00 0.00 1.89
4454 4728 5.361135 TCTCATAAACGACGTGACTGTTA 57.639 39.130 0.00 0.00 0.00 2.41
4455 4729 4.233123 TCTCATAAACGACGTGACTGTT 57.767 40.909 0.00 0.00 0.00 3.16
4456 4730 3.909776 TCTCATAAACGACGTGACTGT 57.090 42.857 0.00 0.00 0.00 3.55
4457 4731 3.608506 CCTTCTCATAAACGACGTGACTG 59.391 47.826 0.00 0.00 0.00 3.51
4458 4732 3.367087 CCCTTCTCATAAACGACGTGACT 60.367 47.826 0.00 0.00 0.00 3.41
4459 4733 2.921754 CCCTTCTCATAAACGACGTGAC 59.078 50.000 0.00 0.00 0.00 3.67
4460 4734 2.094390 CCCCTTCTCATAAACGACGTGA 60.094 50.000 0.00 0.00 0.00 4.35
4461 4735 2.268298 CCCCTTCTCATAAACGACGTG 58.732 52.381 0.00 0.00 0.00 4.49
4462 4736 1.897802 ACCCCTTCTCATAAACGACGT 59.102 47.619 0.00 0.00 0.00 4.34
4463 4737 2.667473 ACCCCTTCTCATAAACGACG 57.333 50.000 0.00 0.00 0.00 5.12
4464 4738 8.672823 AAATTATACCCCTTCTCATAAACGAC 57.327 34.615 0.00 0.00 0.00 4.34
4465 4739 8.487848 TGAAATTATACCCCTTCTCATAAACGA 58.512 33.333 0.00 0.00 0.00 3.85
4466 4740 8.671384 TGAAATTATACCCCTTCTCATAAACG 57.329 34.615 0.00 0.00 0.00 3.60
4469 4743 9.502091 CGAATGAAATTATACCCCTTCTCATAA 57.498 33.333 0.00 0.00 36.07 1.90
4470 4744 8.876181 TCGAATGAAATTATACCCCTTCTCATA 58.124 33.333 0.00 0.00 36.07 2.15
4471 4745 7.745717 TCGAATGAAATTATACCCCTTCTCAT 58.254 34.615 0.00 0.00 36.07 2.90
4472 4746 7.131907 TCGAATGAAATTATACCCCTTCTCA 57.868 36.000 0.00 0.00 36.07 3.27
4473 4747 7.173390 CCTTCGAATGAAATTATACCCCTTCTC 59.827 40.741 0.00 0.00 36.07 2.87
4474 4748 6.998673 CCTTCGAATGAAATTATACCCCTTCT 59.001 38.462 0.00 0.00 36.07 2.85
4475 4749 6.294010 GCCTTCGAATGAAATTATACCCCTTC 60.294 42.308 4.47 0.00 36.07 3.46
4476 4750 5.535030 GCCTTCGAATGAAATTATACCCCTT 59.465 40.000 4.47 0.00 36.07 3.95
4477 4751 5.070685 GCCTTCGAATGAAATTATACCCCT 58.929 41.667 4.47 0.00 36.07 4.79
4478 4752 5.070685 AGCCTTCGAATGAAATTATACCCC 58.929 41.667 4.47 0.00 36.07 4.95
4479 4753 5.181433 GGAGCCTTCGAATGAAATTATACCC 59.819 44.000 4.47 0.00 36.07 3.69
4480 4754 5.998363 AGGAGCCTTCGAATGAAATTATACC 59.002 40.000 4.47 0.00 36.07 2.73
4481 4755 6.706270 TGAGGAGCCTTCGAATGAAATTATAC 59.294 38.462 4.47 0.00 36.07 1.47
4482 4756 6.826668 TGAGGAGCCTTCGAATGAAATTATA 58.173 36.000 4.47 0.00 36.07 0.98
4483 4757 5.684704 TGAGGAGCCTTCGAATGAAATTAT 58.315 37.500 4.47 0.00 36.07 1.28
4484 4758 5.097742 TGAGGAGCCTTCGAATGAAATTA 57.902 39.130 4.47 0.00 36.07 1.40
4485 4759 3.955471 TGAGGAGCCTTCGAATGAAATT 58.045 40.909 4.47 0.00 40.93 1.82
4486 4760 3.634397 TGAGGAGCCTTCGAATGAAAT 57.366 42.857 4.47 0.00 32.66 2.17
4487 4761 3.417069 TTGAGGAGCCTTCGAATGAAA 57.583 42.857 4.47 0.00 32.66 2.69
4488 4762 3.074412 GTTTGAGGAGCCTTCGAATGAA 58.926 45.455 4.47 0.00 0.00 2.57
4489 4763 2.615493 GGTTTGAGGAGCCTTCGAATGA 60.615 50.000 4.47 0.00 0.00 2.57
4490 4764 1.740025 GGTTTGAGGAGCCTTCGAATG 59.260 52.381 0.00 0.00 0.00 2.67
4491 4765 1.351017 TGGTTTGAGGAGCCTTCGAAT 59.649 47.619 0.00 0.00 0.00 3.34
4492 4766 0.762418 TGGTTTGAGGAGCCTTCGAA 59.238 50.000 0.00 0.00 0.00 3.71
4493 4767 0.762418 TTGGTTTGAGGAGCCTTCGA 59.238 50.000 0.00 0.00 0.00 3.71
4494 4768 1.740025 GATTGGTTTGAGGAGCCTTCG 59.260 52.381 0.00 0.00 0.00 3.79
4495 4769 1.740025 CGATTGGTTTGAGGAGCCTTC 59.260 52.381 0.00 0.00 0.00 3.46
4496 4770 1.073923 ACGATTGGTTTGAGGAGCCTT 59.926 47.619 0.00 0.00 0.00 4.35
4497 4771 0.693049 ACGATTGGTTTGAGGAGCCT 59.307 50.000 0.00 0.00 0.00 4.58
4498 4772 1.087501 GACGATTGGTTTGAGGAGCC 58.912 55.000 0.00 0.00 0.00 4.70
4499 4773 2.100605 AGACGATTGGTTTGAGGAGC 57.899 50.000 0.00 0.00 0.00 4.70
4500 4774 6.426937 TCTTTTTAGACGATTGGTTTGAGGAG 59.573 38.462 0.00 0.00 0.00 3.69
4501 4775 6.292923 TCTTTTTAGACGATTGGTTTGAGGA 58.707 36.000 0.00 0.00 0.00 3.71
4502 4776 6.554334 TCTTTTTAGACGATTGGTTTGAGG 57.446 37.500 0.00 0.00 0.00 3.86
4503 4777 8.850454 TTTTCTTTTTAGACGATTGGTTTGAG 57.150 30.769 0.00 0.00 0.00 3.02
4504 4778 9.458374 GATTTTCTTTTTAGACGATTGGTTTGA 57.542 29.630 0.00 0.00 0.00 2.69
4505 4779 9.463443 AGATTTTCTTTTTAGACGATTGGTTTG 57.537 29.630 0.00 0.00 0.00 2.93
4508 4782 8.451748 GCTAGATTTTCTTTTTAGACGATTGGT 58.548 33.333 0.00 0.00 0.00 3.67
4509 4783 7.910683 GGCTAGATTTTCTTTTTAGACGATTGG 59.089 37.037 0.00 0.00 0.00 3.16
4510 4784 8.450964 TGGCTAGATTTTCTTTTTAGACGATTG 58.549 33.333 0.00 0.00 0.00 2.67
4511 4785 8.561738 TGGCTAGATTTTCTTTTTAGACGATT 57.438 30.769 0.00 0.00 0.00 3.34
4512 4786 8.451748 GTTGGCTAGATTTTCTTTTTAGACGAT 58.548 33.333 0.00 0.00 0.00 3.73
4513 4787 7.094933 GGTTGGCTAGATTTTCTTTTTAGACGA 60.095 37.037 0.00 0.00 0.00 4.20
4514 4788 7.021790 GGTTGGCTAGATTTTCTTTTTAGACG 58.978 38.462 0.00 0.00 0.00 4.18
4515 4789 7.882179 TGGTTGGCTAGATTTTCTTTTTAGAC 58.118 34.615 0.00 0.00 0.00 2.59
4516 4790 8.472007 TTGGTTGGCTAGATTTTCTTTTTAGA 57.528 30.769 0.00 0.00 0.00 2.10
4517 4791 7.329471 GCTTGGTTGGCTAGATTTTCTTTTTAG 59.671 37.037 0.00 0.00 0.00 1.85
4518 4792 7.151976 GCTTGGTTGGCTAGATTTTCTTTTTA 58.848 34.615 0.00 0.00 0.00 1.52
4519 4793 5.991606 GCTTGGTTGGCTAGATTTTCTTTTT 59.008 36.000 0.00 0.00 0.00 1.94
4520 4794 5.511373 GGCTTGGTTGGCTAGATTTTCTTTT 60.511 40.000 0.00 0.00 0.00 2.27
4521 4795 4.021104 GGCTTGGTTGGCTAGATTTTCTTT 60.021 41.667 0.00 0.00 0.00 2.52
4522 4796 3.511540 GGCTTGGTTGGCTAGATTTTCTT 59.488 43.478 0.00 0.00 0.00 2.52
4523 4797 3.092301 GGCTTGGTTGGCTAGATTTTCT 58.908 45.455 0.00 0.00 0.00 2.52
4524 4798 2.825532 TGGCTTGGTTGGCTAGATTTTC 59.174 45.455 0.00 0.00 0.00 2.29
4525 4799 2.827921 CTGGCTTGGTTGGCTAGATTTT 59.172 45.455 0.00 0.00 40.03 1.82
4526 4800 2.450476 CTGGCTTGGTTGGCTAGATTT 58.550 47.619 0.00 0.00 40.03 2.17
4527 4801 1.957113 GCTGGCTTGGTTGGCTAGATT 60.957 52.381 0.00 0.00 40.03 2.40
4528 4802 0.394899 GCTGGCTTGGTTGGCTAGAT 60.395 55.000 0.00 0.00 40.03 1.98
4529 4803 1.002134 GCTGGCTTGGTTGGCTAGA 60.002 57.895 0.00 0.00 40.03 2.43
4530 4804 1.001641 AGCTGGCTTGGTTGGCTAG 60.002 57.895 0.00 0.00 40.47 3.42
4531 4805 1.002134 GAGCTGGCTTGGTTGGCTA 60.002 57.895 0.00 0.00 33.13 3.93
4532 4806 2.282745 GAGCTGGCTTGGTTGGCT 60.283 61.111 0.00 0.00 35.86 4.75
4533 4807 1.980772 ATGAGCTGGCTTGGTTGGC 60.981 57.895 0.00 0.00 0.00 4.52
4534 4808 1.601419 CCATGAGCTGGCTTGGTTGG 61.601 60.000 0.00 3.46 38.47 3.77
4535 4809 1.601419 CCCATGAGCTGGCTTGGTTG 61.601 60.000 11.04 1.95 44.46 3.77
4536 4810 1.304713 CCCATGAGCTGGCTTGGTT 60.305 57.895 11.04 0.00 44.46 3.67
4537 4811 2.357836 CCCATGAGCTGGCTTGGT 59.642 61.111 11.04 0.00 44.46 3.67
4538 4812 3.145551 GCCCATGAGCTGGCTTGG 61.146 66.667 5.56 6.38 44.46 3.61
4543 4817 2.353357 TAAGATTGCCCATGAGCTGG 57.647 50.000 0.00 0.00 45.51 4.85
4544 4818 3.058432 CGAATAAGATTGCCCATGAGCTG 60.058 47.826 0.00 0.00 0.00 4.24
4545 4819 3.144506 CGAATAAGATTGCCCATGAGCT 58.855 45.455 0.00 0.00 0.00 4.09
4546 4820 2.351157 GCGAATAAGATTGCCCATGAGC 60.351 50.000 0.00 0.00 0.00 4.26
4547 4821 2.227388 GGCGAATAAGATTGCCCATGAG 59.773 50.000 0.00 0.00 43.09 2.90
4548 4822 2.229792 GGCGAATAAGATTGCCCATGA 58.770 47.619 0.00 0.00 43.09 3.07
4549 4823 2.712057 GGCGAATAAGATTGCCCATG 57.288 50.000 0.00 0.00 43.09 3.66
4554 4828 6.868864 TGTAATAGAGAGGCGAATAAGATTGC 59.131 38.462 0.00 0.00 0.00 3.56
4555 4829 8.867935 CATGTAATAGAGAGGCGAATAAGATTG 58.132 37.037 0.00 0.00 0.00 2.67
4556 4830 7.547370 GCATGTAATAGAGAGGCGAATAAGATT 59.453 37.037 0.00 0.00 0.00 2.40
4557 4831 7.038659 GCATGTAATAGAGAGGCGAATAAGAT 58.961 38.462 0.00 0.00 0.00 2.40
4558 4832 6.209589 AGCATGTAATAGAGAGGCGAATAAGA 59.790 38.462 0.00 0.00 32.44 2.10
4559 4833 6.393990 AGCATGTAATAGAGAGGCGAATAAG 58.606 40.000 0.00 0.00 32.44 1.73
4560 4834 6.346477 AGCATGTAATAGAGAGGCGAATAA 57.654 37.500 0.00 0.00 32.44 1.40
4561 4835 5.392057 CGAGCATGTAATAGAGAGGCGAATA 60.392 44.000 0.00 0.00 32.44 1.75
4562 4836 4.617067 CGAGCATGTAATAGAGAGGCGAAT 60.617 45.833 0.00 0.00 32.44 3.34
4563 4837 3.304726 CGAGCATGTAATAGAGAGGCGAA 60.305 47.826 0.00 0.00 32.44 4.70
4564 4838 2.226674 CGAGCATGTAATAGAGAGGCGA 59.773 50.000 0.00 0.00 32.44 5.54
4565 4839 2.226674 TCGAGCATGTAATAGAGAGGCG 59.773 50.000 0.00 0.00 32.44 5.52
4566 4840 3.924918 TCGAGCATGTAATAGAGAGGC 57.075 47.619 0.00 0.00 0.00 4.70
4567 4841 4.279671 AGGTTCGAGCATGTAATAGAGAGG 59.720 45.833 0.53 0.00 0.00 3.69
4568 4842 5.446143 AGGTTCGAGCATGTAATAGAGAG 57.554 43.478 0.53 0.00 0.00 3.20
4569 4843 5.048643 GCTAGGTTCGAGCATGTAATAGAGA 60.049 44.000 0.53 0.00 39.84 3.10
4570 4844 5.157781 GCTAGGTTCGAGCATGTAATAGAG 58.842 45.833 0.53 0.00 39.84 2.43
4571 4845 4.583073 TGCTAGGTTCGAGCATGTAATAGA 59.417 41.667 0.53 0.00 44.89 1.98
4572 4846 4.871513 TGCTAGGTTCGAGCATGTAATAG 58.128 43.478 0.53 0.00 44.89 1.73
4573 4847 4.929819 TGCTAGGTTCGAGCATGTAATA 57.070 40.909 0.53 0.00 44.89 0.98
4574 4848 3.819564 TGCTAGGTTCGAGCATGTAAT 57.180 42.857 0.53 0.00 44.89 1.89
4581 4855 3.454371 TTCCTATTGCTAGGTTCGAGC 57.546 47.619 0.00 0.00 44.40 5.03
4582 4856 6.538742 TGATTTTTCCTATTGCTAGGTTCGAG 59.461 38.462 0.00 0.00 44.40 4.04
4583 4857 6.411376 TGATTTTTCCTATTGCTAGGTTCGA 58.589 36.000 0.00 0.00 44.40 3.71
4584 4858 6.677781 TGATTTTTCCTATTGCTAGGTTCG 57.322 37.500 0.00 0.00 44.40 3.95
4586 4860 8.633561 GCTTATGATTTTTCCTATTGCTAGGTT 58.366 33.333 0.00 0.00 44.40 3.50
4587 4861 7.231519 GGCTTATGATTTTTCCTATTGCTAGGT 59.768 37.037 0.00 0.00 44.40 3.08
4588 4862 7.231317 TGGCTTATGATTTTTCCTATTGCTAGG 59.769 37.037 0.00 0.00 45.29 3.02
4589 4863 8.169977 TGGCTTATGATTTTTCCTATTGCTAG 57.830 34.615 0.00 0.00 0.00 3.42
4590 4864 8.532186 TTGGCTTATGATTTTTCCTATTGCTA 57.468 30.769 0.00 0.00 0.00 3.49
4591 4865 7.422465 TTGGCTTATGATTTTTCCTATTGCT 57.578 32.000 0.00 0.00 0.00 3.91
4592 4866 8.667076 ATTTGGCTTATGATTTTTCCTATTGC 57.333 30.769 0.00 0.00 0.00 3.56
4603 4877 9.777297 ACAACTGTTTTTATTTGGCTTATGATT 57.223 25.926 0.00 0.00 0.00 2.57
4631 4905 4.566360 CGGCAGTTCTTGACAATTGTTTTT 59.434 37.500 13.36 0.00 32.77 1.94
4632 4906 4.111916 CGGCAGTTCTTGACAATTGTTTT 58.888 39.130 13.36 0.00 32.77 2.43
4633 4907 3.380004 TCGGCAGTTCTTGACAATTGTTT 59.620 39.130 13.36 0.00 32.77 2.83
4634 4908 2.948979 TCGGCAGTTCTTGACAATTGTT 59.051 40.909 13.36 0.00 32.77 2.83
4635 4909 2.290641 GTCGGCAGTTCTTGACAATTGT 59.709 45.455 11.78 11.78 32.77 2.71
4636 4910 2.350772 GGTCGGCAGTTCTTGACAATTG 60.351 50.000 3.24 3.24 32.77 2.32
4637 4911 1.880027 GGTCGGCAGTTCTTGACAATT 59.120 47.619 0.00 0.00 32.77 2.32
4638 4912 1.523758 GGTCGGCAGTTCTTGACAAT 58.476 50.000 0.00 0.00 32.77 2.71
4639 4913 0.878523 CGGTCGGCAGTTCTTGACAA 60.879 55.000 0.00 0.00 32.77 3.18
4640 4914 1.300620 CGGTCGGCAGTTCTTGACA 60.301 57.895 0.00 0.00 32.77 3.58
4641 4915 2.668280 GCGGTCGGCAGTTCTTGAC 61.668 63.158 0.00 0.00 42.87 3.18
4642 4916 2.357034 GCGGTCGGCAGTTCTTGA 60.357 61.111 0.00 0.00 42.87 3.02
4643 4917 3.777925 CGCGGTCGGCAGTTCTTG 61.778 66.667 0.00 0.00 43.84 3.02
4654 4928 4.549516 GTCTACGGGAGCGCGGTC 62.550 72.222 29.18 29.18 0.00 4.79
4666 4940 0.033306 AAGGAGGGAGGACGGTCTAC 60.033 60.000 8.23 2.65 0.00 2.59
4667 4941 0.258194 GAAGGAGGGAGGACGGTCTA 59.742 60.000 8.23 0.00 0.00 2.59
4668 4942 1.000612 GAAGGAGGGAGGACGGTCT 59.999 63.158 8.23 0.00 0.00 3.85
4669 4943 0.688087 ATGAAGGAGGGAGGACGGTC 60.688 60.000 0.00 0.00 0.00 4.79
4670 4944 0.978146 CATGAAGGAGGGAGGACGGT 60.978 60.000 0.00 0.00 0.00 4.83
4671 4945 1.690219 CCATGAAGGAGGGAGGACGG 61.690 65.000 0.00 0.00 41.22 4.79
4672 4946 0.978146 ACCATGAAGGAGGGAGGACG 60.978 60.000 0.00 0.00 41.22 4.79
4673 4947 0.543749 CACCATGAAGGAGGGAGGAC 59.456 60.000 0.00 0.00 41.22 3.85
4674 4948 0.119155 ACACCATGAAGGAGGGAGGA 59.881 55.000 0.00 0.00 41.22 3.71
4675 4949 1.765314 CTACACCATGAAGGAGGGAGG 59.235 57.143 0.00 0.00 41.22 4.30
4676 4950 2.752030 TCTACACCATGAAGGAGGGAG 58.248 52.381 0.00 0.00 41.22 4.30
4677 4951 2.940514 TCTACACCATGAAGGAGGGA 57.059 50.000 0.00 0.00 41.22 4.20
4678 4952 3.041211 TCATCTACACCATGAAGGAGGG 58.959 50.000 0.00 0.00 41.22 4.30
4679 4953 4.639334 CATCATCTACACCATGAAGGAGG 58.361 47.826 0.00 0.00 41.22 4.30
4680 4954 4.063689 GCATCATCTACACCATGAAGGAG 58.936 47.826 0.00 0.00 41.22 3.69
4681 4955 3.181451 GGCATCATCTACACCATGAAGGA 60.181 47.826 0.00 0.00 41.22 3.36
4682 4956 3.144506 GGCATCATCTACACCATGAAGG 58.855 50.000 0.00 0.00 45.67 3.46
4683 4957 4.063689 GAGGCATCATCTACACCATGAAG 58.936 47.826 0.00 0.00 33.94 3.02
4684 4958 3.455543 TGAGGCATCATCTACACCATGAA 59.544 43.478 0.00 0.00 33.94 2.57
4685 4959 3.040477 TGAGGCATCATCTACACCATGA 58.960 45.455 0.00 0.00 34.74 3.07
4686 4960 3.136763 GTGAGGCATCATCTACACCATG 58.863 50.000 3.55 0.00 37.87 3.66
4687 4961 2.224137 CGTGAGGCATCATCTACACCAT 60.224 50.000 3.55 0.00 37.87 3.55
4688 4962 1.136891 CGTGAGGCATCATCTACACCA 59.863 52.381 3.55 0.00 37.87 4.17
4689 4963 1.858091 CGTGAGGCATCATCTACACC 58.142 55.000 3.55 0.00 37.87 4.16
4690 4964 1.212616 GCGTGAGGCATCATCTACAC 58.787 55.000 3.55 0.00 42.87 2.90
4691 4965 0.249031 CGCGTGAGGCATCATCTACA 60.249 55.000 3.55 0.00 43.84 2.74
4692 4966 0.249073 ACGCGTGAGGCATCATCTAC 60.249 55.000 12.93 0.00 43.84 2.59
4693 4967 0.459899 AACGCGTGAGGCATCATCTA 59.540 50.000 14.98 0.00 43.84 1.98
4694 4968 1.086067 CAACGCGTGAGGCATCATCT 61.086 55.000 14.98 0.00 43.84 2.90
4695 4969 1.349627 CAACGCGTGAGGCATCATC 59.650 57.895 14.98 0.00 43.84 2.92
4696 4970 0.955428 AACAACGCGTGAGGCATCAT 60.955 50.000 14.98 0.00 43.84 2.45
4697 4971 1.596752 AACAACGCGTGAGGCATCA 60.597 52.632 14.98 0.00 43.84 3.07
4698 4972 1.154413 CAACAACGCGTGAGGCATC 60.154 57.895 14.98 0.00 43.84 3.91
4699 4973 2.945984 CAACAACGCGTGAGGCAT 59.054 55.556 14.98 0.00 43.84 4.40
4700 4974 3.947841 GCAACAACGCGTGAGGCA 61.948 61.111 14.98 0.00 43.84 4.75
4701 4975 4.683334 GGCAACAACGCGTGAGGC 62.683 66.667 14.98 14.72 38.69 4.70
4702 4976 4.368808 CGGCAACAACGCGTGAGG 62.369 66.667 14.98 8.58 0.00 3.86
4703 4977 4.368808 CCGGCAACAACGCGTGAG 62.369 66.667 14.98 11.98 0.00 3.51
4704 4978 4.893601 TCCGGCAACAACGCGTGA 62.894 61.111 14.98 0.00 0.00 4.35
4705 4979 3.943034 TTCCGGCAACAACGCGTG 61.943 61.111 14.98 10.05 0.00 5.34
4706 4980 3.944233 GTTCCGGCAACAACGCGT 61.944 61.111 5.58 5.58 34.76 6.01
4707 4981 2.655952 AAAGTTCCGGCAACAACGCG 62.656 55.000 3.53 3.53 37.48 6.01
4708 4982 1.065109 AAAGTTCCGGCAACAACGC 59.935 52.632 15.94 0.00 37.48 4.84
4709 4983 0.099791 ACAAAGTTCCGGCAACAACG 59.900 50.000 15.94 8.00 37.48 4.10
4710 4984 2.287393 AACAAAGTTCCGGCAACAAC 57.713 45.000 15.94 7.44 37.48 3.32
4711 4985 4.158025 TCTTTAACAAAGTTCCGGCAACAA 59.842 37.500 15.94 0.00 39.52 2.83
4712 4986 3.695060 TCTTTAACAAAGTTCCGGCAACA 59.305 39.130 15.94 0.00 39.52 3.33
4713 4987 4.295857 TCTTTAACAAAGTTCCGGCAAC 57.704 40.909 0.00 2.25 39.52 4.17
4714 4988 4.985538 TTCTTTAACAAAGTTCCGGCAA 57.014 36.364 0.00 0.00 39.52 4.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.