Multiple sequence alignment - TraesCS5D01G238000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G238000 chr5D 100.000 4098 0 0 1 4098 345984084 345979987 0.000000e+00 7568
1 TraesCS5D01G238000 chr5B 95.583 2015 53 10 2102 4098 405550779 405552775 0.000000e+00 3195
2 TraesCS5D01G238000 chr5B 93.119 1308 58 10 804 2103 405549452 405550735 0.000000e+00 1888
3 TraesCS5D01G238000 chr5A 95.147 1463 46 10 2127 3579 445195607 445197054 0.000000e+00 2285
4 TraesCS5D01G238000 chr5A 95.322 1304 55 4 804 2103 445194242 445195543 0.000000e+00 2065
5 TraesCS5D01G238000 chr5A 94.689 659 16 6 3453 4098 445197054 445197706 0.000000e+00 1005
6 TraesCS5D01G238000 chr3D 93.846 65 4 0 1359 1423 535687679 535687743 9.370000e-17 99
7 TraesCS5D01G238000 chr2D 86.111 72 6 3 3 73 473711762 473711830 1.580000e-09 75


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G238000 chr5D 345979987 345984084 4097 True 7568.0 7568 100.000000 1 4098 1 chr5D.!!$R1 4097
1 TraesCS5D01G238000 chr5B 405549452 405552775 3323 False 2541.5 3195 94.351000 804 4098 2 chr5B.!!$F1 3294
2 TraesCS5D01G238000 chr5A 445194242 445197706 3464 False 1785.0 2285 95.052667 804 4098 3 chr5A.!!$F1 3294

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
205 206 0.038892 ACACGTAACGTTGCCGATCT 60.039 50.0 23.28 4.19 38.32 2.75 F
669 670 0.106519 CGGGAAGGCCAGGAATTGAT 60.107 55.0 5.01 0.00 35.15 2.57 F
674 675 0.107017 AGGCCAGGAATTGATGACGG 60.107 55.0 5.01 0.00 0.00 4.79 F
675 676 0.394352 GGCCAGGAATTGATGACGGT 60.394 55.0 0.00 0.00 0.00 4.83 F
1023 1024 0.965866 CAGCTCTCCACCACCTCGTA 60.966 60.0 0.00 0.00 0.00 3.43 F
2709 2777 0.839946 ACCTTGAACTGCCTGTGAGT 59.160 50.0 0.00 0.00 0.00 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1552 1556 0.455410 ACGCGTAATACAAGGCCGTA 59.545 50.000 11.67 0.00 0.00 4.02 R
1566 1570 0.666274 TCGAAAGCATCAGAACGCGT 60.666 50.000 5.58 5.58 0.00 6.01 R
2433 2501 1.066430 TCGGTGAACCCATAGTCAAGC 60.066 52.381 0.00 0.00 0.00 4.01 R
2649 2717 2.869101 AGAGGGCTTCCAAGAGAAAC 57.131 50.000 0.00 0.00 32.88 2.78 R
2763 2831 1.675641 GGTGTGGTAGGCAGCAAGG 60.676 63.158 0.00 0.00 33.05 3.61 R
3572 3772 3.326836 TGACCGATTGACAGTAATGCA 57.673 42.857 0.00 0.00 0.00 3.96 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.799213 AGTCTAGGACTTGAAGTTTGATGG 58.201 41.667 0.00 0.00 40.28 3.51
24 25 4.938226 GTCTAGGACTTGAAGTTTGATGGG 59.062 45.833 0.00 0.00 0.00 4.00
25 26 2.519013 AGGACTTGAAGTTTGATGGGC 58.481 47.619 0.00 0.00 0.00 5.36
26 27 1.546029 GGACTTGAAGTTTGATGGGCC 59.454 52.381 0.00 0.00 0.00 5.80
27 28 1.200020 GACTTGAAGTTTGATGGGCCG 59.800 52.381 0.00 0.00 0.00 6.13
28 29 0.527565 CTTGAAGTTTGATGGGCCGG 59.472 55.000 0.00 0.00 0.00 6.13
29 30 0.897863 TTGAAGTTTGATGGGCCGGG 60.898 55.000 2.18 0.00 0.00 5.73
30 31 2.037208 AAGTTTGATGGGCCGGGG 59.963 61.111 2.18 0.00 0.00 5.73
31 32 2.493273 GAAGTTTGATGGGCCGGGGA 62.493 60.000 2.18 0.00 0.00 4.81
32 33 1.874299 AAGTTTGATGGGCCGGGGAT 61.874 55.000 2.18 0.00 0.00 3.85
33 34 0.991355 AGTTTGATGGGCCGGGGATA 60.991 55.000 2.18 0.00 0.00 2.59
34 35 0.822121 GTTTGATGGGCCGGGGATAC 60.822 60.000 2.18 0.00 0.00 2.24
50 51 3.487372 GGATACCATTGGCCTTCTAACC 58.513 50.000 3.32 0.00 0.00 2.85
51 52 3.117663 GGATACCATTGGCCTTCTAACCA 60.118 47.826 3.32 0.00 0.00 3.67
52 53 4.447762 GGATACCATTGGCCTTCTAACCAT 60.448 45.833 3.32 0.00 35.42 3.55
53 54 3.018423 ACCATTGGCCTTCTAACCATC 57.982 47.619 3.32 0.00 35.42 3.51
54 55 2.310538 CCATTGGCCTTCTAACCATCC 58.689 52.381 3.32 0.00 35.42 3.51
55 56 2.358090 CCATTGGCCTTCTAACCATCCA 60.358 50.000 3.32 0.00 35.42 3.41
56 57 3.364549 CATTGGCCTTCTAACCATCCAA 58.635 45.455 3.32 0.00 37.89 3.53
57 58 2.507407 TGGCCTTCTAACCATCCAAC 57.493 50.000 3.32 0.00 0.00 3.77
58 59 1.005450 TGGCCTTCTAACCATCCAACC 59.995 52.381 3.32 0.00 0.00 3.77
59 60 1.005450 GGCCTTCTAACCATCCAACCA 59.995 52.381 0.00 0.00 0.00 3.67
60 61 2.092323 GCCTTCTAACCATCCAACCAC 58.908 52.381 0.00 0.00 0.00 4.16
61 62 2.290960 GCCTTCTAACCATCCAACCACT 60.291 50.000 0.00 0.00 0.00 4.00
62 63 3.054655 GCCTTCTAACCATCCAACCACTA 60.055 47.826 0.00 0.00 0.00 2.74
63 64 4.770795 CCTTCTAACCATCCAACCACTAG 58.229 47.826 0.00 0.00 0.00 2.57
64 65 4.225267 CCTTCTAACCATCCAACCACTAGT 59.775 45.833 0.00 0.00 0.00 2.57
65 66 5.280521 CCTTCTAACCATCCAACCACTAGTT 60.281 44.000 0.00 0.00 40.16 2.24
77 78 3.791973 CCACTAGTTGGTTTGCAAACA 57.208 42.857 35.95 22.62 41.10 2.83
78 79 4.116747 CCACTAGTTGGTTTGCAAACAA 57.883 40.909 35.95 27.24 41.10 2.83
79 80 3.862845 CCACTAGTTGGTTTGCAAACAAC 59.137 43.478 35.95 32.37 41.10 3.32
80 81 3.862845 CACTAGTTGGTTTGCAAACAACC 59.137 43.478 35.95 22.96 40.63 3.77
81 82 3.511934 ACTAGTTGGTTTGCAAACAACCA 59.488 39.130 35.95 26.50 40.63 3.67
82 83 3.625649 AGTTGGTTTGCAAACAACCAT 57.374 38.095 35.95 21.48 40.63 3.55
83 84 3.949132 AGTTGGTTTGCAAACAACCATT 58.051 36.364 35.95 20.95 40.63 3.16
84 85 3.688673 AGTTGGTTTGCAAACAACCATTG 59.311 39.130 35.95 0.00 40.63 2.82
85 86 3.616956 TGGTTTGCAAACAACCATTGA 57.383 38.095 35.95 8.30 40.63 2.57
86 87 4.148128 TGGTTTGCAAACAACCATTGAT 57.852 36.364 35.95 0.00 40.63 2.57
87 88 4.125703 TGGTTTGCAAACAACCATTGATC 58.874 39.130 35.95 19.05 40.63 2.92
88 89 4.141756 TGGTTTGCAAACAACCATTGATCT 60.142 37.500 35.95 0.00 40.63 2.75
89 90 4.211794 GGTTTGCAAACAACCATTGATCTG 59.788 41.667 35.95 0.00 40.63 2.90
90 91 3.663995 TGCAAACAACCATTGATCTGG 57.336 42.857 0.00 0.00 42.35 3.86
92 93 9.770926 GGTTTGCAAACAACCATTGATCTGGTA 62.771 40.741 35.95 0.00 42.87 3.25
101 102 5.282055 CCATTGATCTGGTAGCTAGAACA 57.718 43.478 0.00 0.00 0.00 3.18
102 103 5.053145 CCATTGATCTGGTAGCTAGAACAC 58.947 45.833 0.00 0.00 28.41 3.32
103 104 5.395657 CCATTGATCTGGTAGCTAGAACACA 60.396 44.000 0.00 0.00 28.41 3.72
104 105 4.720649 TGATCTGGTAGCTAGAACACAC 57.279 45.455 0.00 0.00 0.00 3.82
105 106 3.128764 TGATCTGGTAGCTAGAACACACG 59.871 47.826 0.00 0.00 0.00 4.49
106 107 1.201647 TCTGGTAGCTAGAACACACGC 59.798 52.381 0.00 0.00 0.00 5.34
107 108 1.202582 CTGGTAGCTAGAACACACGCT 59.797 52.381 0.00 0.00 36.56 5.07
108 109 1.616865 TGGTAGCTAGAACACACGCTT 59.383 47.619 0.00 0.00 34.14 4.68
109 110 2.821378 TGGTAGCTAGAACACACGCTTA 59.179 45.455 0.00 0.00 34.14 3.09
110 111 3.256383 TGGTAGCTAGAACACACGCTTAA 59.744 43.478 0.00 0.00 34.14 1.85
111 112 3.611549 GGTAGCTAGAACACACGCTTAAC 59.388 47.826 0.00 0.00 34.14 2.01
112 113 3.380479 AGCTAGAACACACGCTTAACA 57.620 42.857 0.00 0.00 0.00 2.41
113 114 3.057734 AGCTAGAACACACGCTTAACAC 58.942 45.455 0.00 0.00 0.00 3.32
114 115 3.057734 GCTAGAACACACGCTTAACACT 58.942 45.455 0.00 0.00 0.00 3.55
115 116 4.022589 AGCTAGAACACACGCTTAACACTA 60.023 41.667 0.00 0.00 0.00 2.74
116 117 4.863131 GCTAGAACACACGCTTAACACTAT 59.137 41.667 0.00 0.00 0.00 2.12
117 118 5.220228 GCTAGAACACACGCTTAACACTATG 60.220 44.000 0.00 0.00 0.00 2.23
118 119 4.628074 AGAACACACGCTTAACACTATGT 58.372 39.130 0.00 0.00 0.00 2.29
119 120 4.447724 AGAACACACGCTTAACACTATGTG 59.552 41.667 0.00 0.00 42.44 3.21
120 121 2.478894 ACACACGCTTAACACTATGTGC 59.521 45.455 2.24 0.00 40.84 4.57
121 122 1.724623 ACACGCTTAACACTATGTGCG 59.275 47.619 9.71 9.71 43.15 5.34
122 123 2.074547 ACGCTTAACACTATGTGCGT 57.925 45.000 10.79 10.79 44.74 5.24
123 124 1.724623 ACGCTTAACACTATGTGCGTG 59.275 47.619 14.52 0.00 46.66 5.34
124 125 1.724623 CGCTTAACACTATGTGCGTGT 59.275 47.619 0.00 0.00 46.77 4.49
125 126 2.222508 CGCTTAACACTATGTGCGTGTC 60.223 50.000 0.00 0.00 44.25 3.67
126 127 2.734606 GCTTAACACTATGTGCGTGTCA 59.265 45.455 0.00 0.00 44.25 3.58
127 128 3.370978 GCTTAACACTATGTGCGTGTCAT 59.629 43.478 0.00 0.00 44.25 3.06
128 129 4.724885 GCTTAACACTATGTGCGTGTCATG 60.725 45.833 0.00 0.00 44.25 3.07
129 130 2.741759 ACACTATGTGCGTGTCATGA 57.258 45.000 0.00 0.00 41.45 3.07
130 131 3.038788 ACACTATGTGCGTGTCATGAA 57.961 42.857 0.00 0.00 41.45 2.57
131 132 3.398406 ACACTATGTGCGTGTCATGAAA 58.602 40.909 0.00 0.00 41.45 2.69
132 133 3.812609 ACACTATGTGCGTGTCATGAAAA 59.187 39.130 0.00 0.00 41.45 2.29
133 134 4.455533 ACACTATGTGCGTGTCATGAAAAT 59.544 37.500 0.00 0.00 41.45 1.82
134 135 5.641636 ACACTATGTGCGTGTCATGAAAATA 59.358 36.000 0.00 0.00 41.45 1.40
135 136 6.148645 ACACTATGTGCGTGTCATGAAAATAA 59.851 34.615 0.00 0.00 41.45 1.40
136 137 7.148255 ACACTATGTGCGTGTCATGAAAATAAT 60.148 33.333 0.00 0.00 41.45 1.28
137 138 7.697710 CACTATGTGCGTGTCATGAAAATAATT 59.302 33.333 0.00 0.00 0.00 1.40
138 139 8.243426 ACTATGTGCGTGTCATGAAAATAATTT 58.757 29.630 0.00 0.00 0.00 1.82
139 140 9.715123 CTATGTGCGTGTCATGAAAATAATTTA 57.285 29.630 0.00 0.00 0.00 1.40
141 142 8.978564 TGTGCGTGTCATGAAAATAATTTATT 57.021 26.923 0.00 0.00 0.00 1.40
142 143 9.416794 TGTGCGTGTCATGAAAATAATTTATTT 57.583 25.926 8.30 8.30 39.92 1.40
160 161 7.748875 TTTATTTATTTTCGTTCGACACACG 57.251 32.000 1.73 1.73 44.09 4.49
168 169 4.601315 TCGACACACGAGACAACG 57.399 55.556 0.00 0.00 46.45 4.10
169 170 1.656263 TCGACACACGAGACAACGC 60.656 57.895 0.00 0.00 46.45 4.84
170 171 1.657487 CGACACACGAGACAACGCT 60.657 57.895 0.00 0.00 45.77 5.07
171 172 1.206745 CGACACACGAGACAACGCTT 61.207 55.000 0.00 0.00 45.77 4.68
172 173 0.928229 GACACACGAGACAACGCTTT 59.072 50.000 0.00 0.00 36.70 3.51
173 174 1.326548 GACACACGAGACAACGCTTTT 59.673 47.619 0.00 0.00 36.70 2.27
174 175 2.536803 GACACACGAGACAACGCTTTTA 59.463 45.455 0.00 0.00 36.70 1.52
175 176 3.128349 ACACACGAGACAACGCTTTTAT 58.872 40.909 0.00 0.00 36.70 1.40
176 177 3.558418 ACACACGAGACAACGCTTTTATT 59.442 39.130 0.00 0.00 36.70 1.40
177 178 4.746115 ACACACGAGACAACGCTTTTATTA 59.254 37.500 0.00 0.00 36.70 0.98
178 179 5.107607 ACACACGAGACAACGCTTTTATTAG 60.108 40.000 0.00 0.00 36.70 1.73
179 180 4.986659 ACACGAGACAACGCTTTTATTAGT 59.013 37.500 0.00 0.00 36.70 2.24
180 181 6.088483 CACACGAGACAACGCTTTTATTAGTA 59.912 38.462 0.00 0.00 36.70 1.82
181 182 6.642131 ACACGAGACAACGCTTTTATTAGTAA 59.358 34.615 0.00 0.00 36.70 2.24
182 183 7.330208 ACACGAGACAACGCTTTTATTAGTAAT 59.670 33.333 0.17 0.17 36.70 1.89
183 184 7.630987 CACGAGACAACGCTTTTATTAGTAATG 59.369 37.037 5.61 0.00 36.70 1.90
184 185 7.543172 ACGAGACAACGCTTTTATTAGTAATGA 59.457 33.333 5.61 0.00 36.70 2.57
185 186 7.839837 CGAGACAACGCTTTTATTAGTAATGAC 59.160 37.037 5.61 0.00 0.00 3.06
186 187 8.542497 AGACAACGCTTTTATTAGTAATGACA 57.458 30.769 5.61 0.00 0.00 3.58
187 188 8.440833 AGACAACGCTTTTATTAGTAATGACAC 58.559 33.333 5.61 0.00 0.00 3.67
188 189 8.090250 ACAACGCTTTTATTAGTAATGACACA 57.910 30.769 5.61 0.00 0.00 3.72
189 190 8.013378 ACAACGCTTTTATTAGTAATGACACAC 58.987 33.333 5.61 0.00 0.00 3.82
190 191 6.758149 ACGCTTTTATTAGTAATGACACACG 58.242 36.000 5.61 5.35 0.00 4.49
191 192 6.366877 ACGCTTTTATTAGTAATGACACACGT 59.633 34.615 5.61 5.91 0.00 4.49
192 193 7.541783 ACGCTTTTATTAGTAATGACACACGTA 59.458 33.333 5.61 0.00 0.00 3.57
193 194 8.374728 CGCTTTTATTAGTAATGACACACGTAA 58.625 33.333 5.61 0.00 0.00 3.18
194 195 9.469239 GCTTTTATTAGTAATGACACACGTAAC 57.531 33.333 5.61 0.00 0.00 2.50
195 196 9.666163 CTTTTATTAGTAATGACACACGTAACG 57.334 33.333 5.61 0.00 0.00 3.18
196 197 8.741101 TTTATTAGTAATGACACACGTAACGT 57.259 30.769 5.61 0.00 42.36 3.99
197 198 8.741101 TTATTAGTAATGACACACGTAACGTT 57.259 30.769 5.88 5.88 38.32 3.99
198 199 4.959631 AGTAATGACACACGTAACGTTG 57.040 40.909 11.99 0.00 38.32 4.10
199 200 2.656192 AATGACACACGTAACGTTGC 57.344 45.000 11.99 9.00 38.32 4.17
200 201 0.863144 ATGACACACGTAACGTTGCC 59.137 50.000 11.99 0.00 38.32 4.52
201 202 1.199859 GACACACGTAACGTTGCCG 59.800 57.895 11.99 15.21 38.32 5.69
202 203 1.208009 GACACACGTAACGTTGCCGA 61.208 55.000 23.28 0.00 38.32 5.54
203 204 0.598158 ACACACGTAACGTTGCCGAT 60.598 50.000 23.28 11.57 38.32 4.18
204 205 0.092351 CACACGTAACGTTGCCGATC 59.908 55.000 23.28 3.25 38.32 3.69
205 206 0.038892 ACACGTAACGTTGCCGATCT 60.039 50.000 23.28 4.19 38.32 2.75
206 207 1.065358 CACGTAACGTTGCCGATCTT 58.935 50.000 23.28 3.89 38.32 2.40
207 208 2.252747 CACGTAACGTTGCCGATCTTA 58.747 47.619 23.28 0.00 38.32 2.10
208 209 2.662637 CACGTAACGTTGCCGATCTTAA 59.337 45.455 23.28 0.00 38.32 1.85
209 210 3.121611 CACGTAACGTTGCCGATCTTAAA 59.878 43.478 23.28 0.00 38.32 1.52
210 211 3.365820 ACGTAACGTTGCCGATCTTAAAG 59.634 43.478 23.28 4.56 36.35 1.85
211 212 2.894307 AACGTTGCCGATCTTAAAGC 57.106 45.000 0.00 0.00 37.88 3.51
212 213 2.094762 ACGTTGCCGATCTTAAAGCT 57.905 45.000 0.00 0.00 37.88 3.74
213 214 2.000447 ACGTTGCCGATCTTAAAGCTC 59.000 47.619 0.00 0.00 37.88 4.09
214 215 1.327764 CGTTGCCGATCTTAAAGCTCC 59.672 52.381 0.00 0.00 35.63 4.70
215 216 2.356135 GTTGCCGATCTTAAAGCTCCA 58.644 47.619 0.00 0.00 0.00 3.86
216 217 2.945668 GTTGCCGATCTTAAAGCTCCAT 59.054 45.455 0.00 0.00 0.00 3.41
217 218 2.564771 TGCCGATCTTAAAGCTCCATG 58.435 47.619 0.00 0.00 0.00 3.66
218 219 2.170397 TGCCGATCTTAAAGCTCCATGA 59.830 45.455 0.00 0.00 0.00 3.07
219 220 2.545946 GCCGATCTTAAAGCTCCATGAC 59.454 50.000 0.00 0.00 0.00 3.06
220 221 3.742640 GCCGATCTTAAAGCTCCATGACT 60.743 47.826 0.00 0.00 0.00 3.41
221 222 4.054671 CCGATCTTAAAGCTCCATGACTC 58.945 47.826 0.00 0.00 0.00 3.36
222 223 3.733224 CGATCTTAAAGCTCCATGACTCG 59.267 47.826 0.00 0.00 0.00 4.18
223 224 3.526931 TCTTAAAGCTCCATGACTCGG 57.473 47.619 0.00 0.00 0.00 4.63
224 225 2.168521 TCTTAAAGCTCCATGACTCGGG 59.831 50.000 0.00 0.00 0.00 5.14
225 226 0.178068 TAAAGCTCCATGACTCGGGC 59.822 55.000 0.00 0.00 0.00 6.13
226 227 1.841302 AAAGCTCCATGACTCGGGCA 61.841 55.000 0.00 0.00 0.00 5.36
227 228 1.630126 AAGCTCCATGACTCGGGCAT 61.630 55.000 0.00 0.00 0.00 4.40
228 229 1.153086 GCTCCATGACTCGGGCATT 60.153 57.895 0.00 0.00 0.00 3.56
229 230 1.162800 GCTCCATGACTCGGGCATTC 61.163 60.000 0.00 0.00 0.00 2.67
230 231 0.178767 CTCCATGACTCGGGCATTCA 59.821 55.000 0.00 0.00 0.00 2.57
231 232 0.178767 TCCATGACTCGGGCATTCAG 59.821 55.000 0.00 0.00 0.00 3.02
232 233 0.107508 CCATGACTCGGGCATTCAGT 60.108 55.000 0.00 0.00 0.00 3.41
233 234 1.138859 CCATGACTCGGGCATTCAGTA 59.861 52.381 0.00 0.00 0.00 2.74
234 235 2.224378 CCATGACTCGGGCATTCAGTAT 60.224 50.000 0.00 0.00 0.00 2.12
235 236 2.602257 TGACTCGGGCATTCAGTATG 57.398 50.000 0.00 0.00 37.31 2.39
236 237 1.831106 TGACTCGGGCATTCAGTATGT 59.169 47.619 0.00 0.00 36.57 2.29
237 238 2.205074 GACTCGGGCATTCAGTATGTG 58.795 52.381 0.00 0.00 36.57 3.21
238 239 1.555075 ACTCGGGCATTCAGTATGTGT 59.445 47.619 0.00 0.00 36.57 3.72
239 240 2.205074 CTCGGGCATTCAGTATGTGTC 58.795 52.381 0.00 0.00 36.57 3.67
240 241 1.831106 TCGGGCATTCAGTATGTGTCT 59.169 47.619 0.00 0.00 36.57 3.41
241 242 3.028130 TCGGGCATTCAGTATGTGTCTA 58.972 45.455 0.00 0.00 36.57 2.59
242 243 3.641436 TCGGGCATTCAGTATGTGTCTAT 59.359 43.478 0.00 0.00 36.57 1.98
243 244 3.742882 CGGGCATTCAGTATGTGTCTATG 59.257 47.826 0.00 0.00 36.57 2.23
244 245 4.501400 CGGGCATTCAGTATGTGTCTATGA 60.501 45.833 0.00 0.00 36.57 2.15
245 246 5.368145 GGGCATTCAGTATGTGTCTATGAA 58.632 41.667 0.00 0.00 36.57 2.57
246 247 6.000219 GGGCATTCAGTATGTGTCTATGAAT 59.000 40.000 0.00 0.00 40.32 2.57
249 250 7.430992 CATTCAGTATGTGTCTATGAATGGG 57.569 40.000 15.16 0.00 46.89 4.00
250 251 4.960938 TCAGTATGTGTCTATGAATGGGC 58.039 43.478 0.00 0.00 37.40 5.36
251 252 3.742882 CAGTATGTGTCTATGAATGGGCG 59.257 47.826 0.00 0.00 0.00 6.13
252 253 3.388024 AGTATGTGTCTATGAATGGGCGT 59.612 43.478 0.00 0.00 0.00 5.68
253 254 4.587262 AGTATGTGTCTATGAATGGGCGTA 59.413 41.667 0.00 0.00 0.00 4.42
254 255 3.173668 TGTGTCTATGAATGGGCGTAC 57.826 47.619 0.00 0.00 0.00 3.67
255 256 2.498078 TGTGTCTATGAATGGGCGTACA 59.502 45.455 0.00 0.00 0.00 2.90
256 257 3.055747 TGTGTCTATGAATGGGCGTACAA 60.056 43.478 0.00 0.00 0.00 2.41
257 258 4.127171 GTGTCTATGAATGGGCGTACAAT 58.873 43.478 0.00 0.00 0.00 2.71
258 259 4.024893 GTGTCTATGAATGGGCGTACAATG 60.025 45.833 0.00 0.00 0.00 2.82
259 260 3.058914 GTCTATGAATGGGCGTACAATGC 60.059 47.826 0.00 0.00 0.00 3.56
260 261 1.761449 ATGAATGGGCGTACAATGCA 58.239 45.000 0.00 0.00 0.00 3.96
261 262 0.808125 TGAATGGGCGTACAATGCAC 59.192 50.000 0.00 0.00 33.14 4.57
263 264 3.661911 TGGGCGTACAATGCACAC 58.338 55.556 0.00 0.00 38.87 3.82
264 265 1.227973 TGGGCGTACAATGCACACA 60.228 52.632 0.00 0.00 38.87 3.72
265 266 0.607762 TGGGCGTACAATGCACACAT 60.608 50.000 0.00 0.00 38.87 3.21
267 268 1.740585 GGGCGTACAATGCACACATTA 59.259 47.619 0.00 0.00 44.83 1.90
268 269 2.357637 GGGCGTACAATGCACACATTAT 59.642 45.455 0.00 0.00 44.83 1.28
269 270 3.548014 GGGCGTACAATGCACACATTATC 60.548 47.826 0.00 0.00 44.83 1.75
270 271 3.312421 GGCGTACAATGCACACATTATCT 59.688 43.478 0.00 0.00 44.83 1.98
271 272 4.201910 GGCGTACAATGCACACATTATCTT 60.202 41.667 0.00 0.00 44.83 2.40
272 273 5.007234 GGCGTACAATGCACACATTATCTTA 59.993 40.000 0.00 0.00 44.83 2.10
273 274 6.457663 GGCGTACAATGCACACATTATCTTAA 60.458 38.462 0.00 0.00 44.83 1.85
274 275 6.964370 GCGTACAATGCACACATTATCTTAAA 59.036 34.615 0.00 0.00 44.83 1.52
275 276 7.483375 GCGTACAATGCACACATTATCTTAAAA 59.517 33.333 0.00 0.00 44.83 1.52
276 277 9.335891 CGTACAATGCACACATTATCTTAAAAA 57.664 29.630 0.00 0.00 44.83 1.94
279 280 9.410556 ACAATGCACACATTATCTTAAAAAGTC 57.589 29.630 0.00 0.00 44.83 3.01
280 281 9.409312 CAATGCACACATTATCTTAAAAAGTCA 57.591 29.630 0.00 0.00 44.83 3.41
281 282 9.979578 AATGCACACATTATCTTAAAAAGTCAA 57.020 25.926 0.00 0.00 44.78 3.18
282 283 9.979578 ATGCACACATTATCTTAAAAAGTCAAA 57.020 25.926 0.00 0.00 30.07 2.69
283 284 9.979578 TGCACACATTATCTTAAAAAGTCAAAT 57.020 25.926 0.00 0.00 0.00 2.32
315 316 8.984482 TTAACGCATTTGATTGTTTGAAAATG 57.016 26.923 0.00 0.00 41.04 2.32
333 334 5.968528 AAATGCAATTTGTTGCCATCAAT 57.031 30.435 10.28 0.00 46.55 2.57
334 335 5.968528 AATGCAATTTGTTGCCATCAATT 57.031 30.435 10.28 1.29 46.82 2.32
335 336 5.968528 ATGCAATTTGTTGCCATCAATTT 57.031 30.435 10.28 0.00 46.82 1.82
336 337 5.359716 TGCAATTTGTTGCCATCAATTTC 57.640 34.783 10.28 0.00 46.82 2.17
337 338 4.820173 TGCAATTTGTTGCCATCAATTTCA 59.180 33.333 10.28 0.00 46.82 2.69
338 339 5.148568 GCAATTTGTTGCCATCAATTTCAC 58.851 37.500 1.84 0.00 41.85 3.18
339 340 5.049267 GCAATTTGTTGCCATCAATTTCACT 60.049 36.000 1.84 0.00 41.85 3.41
340 341 6.595794 CAATTTGTTGCCATCAATTTCACTC 58.404 36.000 0.00 0.00 34.29 3.51
341 342 3.557577 TGTTGCCATCAATTTCACTCG 57.442 42.857 0.00 0.00 34.29 4.18
342 343 2.253603 GTTGCCATCAATTTCACTCGC 58.746 47.619 0.00 0.00 34.29 5.03
343 344 0.447406 TGCCATCAATTTCACTCGCG 59.553 50.000 0.00 0.00 0.00 5.87
344 345 0.248215 GCCATCAATTTCACTCGCGG 60.248 55.000 6.13 0.00 0.00 6.46
345 346 0.378257 CCATCAATTTCACTCGCGGG 59.622 55.000 3.27 3.27 0.00 6.13
346 347 1.368641 CATCAATTTCACTCGCGGGA 58.631 50.000 15.95 1.66 0.00 5.14
347 348 1.328680 CATCAATTTCACTCGCGGGAG 59.671 52.381 26.24 26.24 46.13 4.30
348 349 0.606096 TCAATTTCACTCGCGGGAGA 59.394 50.000 33.29 7.84 43.27 3.71
349 350 1.001520 TCAATTTCACTCGCGGGAGAA 59.998 47.619 33.29 15.46 43.27 2.87
350 351 1.394917 CAATTTCACTCGCGGGAGAAG 59.605 52.381 33.29 23.81 43.27 2.85
351 352 0.895530 ATTTCACTCGCGGGAGAAGA 59.104 50.000 33.29 25.44 43.27 2.87
352 353 0.895530 TTTCACTCGCGGGAGAAGAT 59.104 50.000 33.29 10.43 43.27 2.40
353 354 0.173481 TTCACTCGCGGGAGAAGATG 59.827 55.000 33.29 21.17 43.27 2.90
354 355 1.227089 CACTCGCGGGAGAAGATGG 60.227 63.158 33.29 8.72 43.27 3.51
355 356 2.279784 CTCGCGGGAGAAGATGGC 60.280 66.667 24.08 0.00 43.27 4.40
358 359 4.918201 GCGGGAGAAGATGGCGGG 62.918 72.222 0.00 0.00 0.00 6.13
359 360 3.154473 CGGGAGAAGATGGCGGGA 61.154 66.667 0.00 0.00 0.00 5.14
360 361 2.506472 GGGAGAAGATGGCGGGAC 59.494 66.667 0.00 0.00 0.00 4.46
378 379 3.859414 GCAGGCAGAGGCGGAGAT 61.859 66.667 0.00 0.00 42.47 2.75
379 380 2.108566 CAGGCAGAGGCGGAGATG 59.891 66.667 0.00 0.00 42.47 2.90
380 381 3.160047 AGGCAGAGGCGGAGATGG 61.160 66.667 0.00 0.00 42.47 3.51
381 382 4.247380 GGCAGAGGCGGAGATGGG 62.247 72.222 0.00 0.00 42.47 4.00
382 383 4.247380 GCAGAGGCGGAGATGGGG 62.247 72.222 0.00 0.00 0.00 4.96
383 384 3.554342 CAGAGGCGGAGATGGGGG 61.554 72.222 0.00 0.00 0.00 5.40
389 390 4.856801 CGGAGATGGGGGCAACGG 62.857 72.222 0.00 0.00 37.60 4.44
390 391 3.728373 GGAGATGGGGGCAACGGT 61.728 66.667 0.00 0.00 37.60 4.83
391 392 2.438434 GAGATGGGGGCAACGGTG 60.438 66.667 0.00 0.00 37.60 4.94
392 393 3.995506 GAGATGGGGGCAACGGTGG 62.996 68.421 0.90 0.00 37.60 4.61
393 394 4.360405 GATGGGGGCAACGGTGGT 62.360 66.667 0.90 0.00 37.60 4.16
394 395 4.676951 ATGGGGGCAACGGTGGTG 62.677 66.667 0.90 0.00 37.60 4.17
399 400 4.279043 GGCAACGGTGGTGGCAAC 62.279 66.667 0.90 0.00 45.44 4.17
400 401 4.622456 GCAACGGTGGTGGCAACG 62.622 66.667 0.90 0.00 42.99 4.10
401 402 2.897846 CAACGGTGGTGGCAACGA 60.898 61.111 0.00 0.00 38.84 3.85
402 403 2.898343 AACGGTGGTGGCAACGAC 60.898 61.111 0.00 0.00 38.84 4.34
405 406 3.343421 GGTGGTGGCAACGACGTC 61.343 66.667 5.18 5.18 35.98 4.34
406 407 3.343421 GTGGTGGCAACGACGTCC 61.343 66.667 10.58 0.00 42.51 4.79
407 408 4.612412 TGGTGGCAACGACGTCCC 62.612 66.667 10.58 5.77 42.51 4.46
408 409 4.612412 GGTGGCAACGACGTCCCA 62.612 66.667 10.58 14.26 42.51 4.37
409 410 2.589442 GTGGCAACGACGTCCCAA 60.589 61.111 18.41 4.50 42.51 4.12
410 411 2.589442 TGGCAACGACGTCCCAAC 60.589 61.111 15.49 0.00 42.51 3.77
411 412 2.589442 GGCAACGACGTCCCAACA 60.589 61.111 10.58 0.00 0.00 3.33
412 413 2.181521 GGCAACGACGTCCCAACAA 61.182 57.895 10.58 0.00 0.00 2.83
413 414 1.512156 GGCAACGACGTCCCAACAAT 61.512 55.000 10.58 0.00 0.00 2.71
414 415 0.385473 GCAACGACGTCCCAACAATG 60.385 55.000 10.58 0.00 0.00 2.82
415 416 0.385473 CAACGACGTCCCAACAATGC 60.385 55.000 10.58 0.00 0.00 3.56
416 417 1.512156 AACGACGTCCCAACAATGCC 61.512 55.000 10.58 0.00 0.00 4.40
417 418 2.867472 GACGTCCCAACAATGCCG 59.133 61.111 3.51 0.00 0.00 5.69
418 419 1.669760 GACGTCCCAACAATGCCGA 60.670 57.895 3.51 0.00 0.00 5.54
419 420 1.635663 GACGTCCCAACAATGCCGAG 61.636 60.000 3.51 0.00 0.00 4.63
420 421 2.877691 GTCCCAACAATGCCGAGC 59.122 61.111 0.00 0.00 0.00 5.03
421 422 2.361104 TCCCAACAATGCCGAGCC 60.361 61.111 0.00 0.00 0.00 4.70
422 423 3.814268 CCCAACAATGCCGAGCCG 61.814 66.667 0.00 0.00 0.00 5.52
438 439 3.382832 CGGGAGCGACCTGGAGTT 61.383 66.667 0.00 0.00 41.14 3.01
439 440 2.266055 GGGAGCGACCTGGAGTTG 59.734 66.667 0.00 0.00 38.98 3.16
440 441 2.266055 GGAGCGACCTGGAGTTGG 59.734 66.667 0.00 0.00 35.41 3.77
441 442 2.435059 GAGCGACCTGGAGTTGGC 60.435 66.667 0.00 0.00 0.00 4.52
442 443 3.240134 GAGCGACCTGGAGTTGGCA 62.240 63.158 0.00 0.00 32.34 4.92
443 444 2.045926 GCGACCTGGAGTTGGCAT 60.046 61.111 0.00 0.00 0.00 4.40
444 445 2.109126 GCGACCTGGAGTTGGCATC 61.109 63.158 0.00 0.00 0.00 3.91
445 446 1.296392 CGACCTGGAGTTGGCATCA 59.704 57.895 0.00 0.00 0.00 3.07
446 447 0.321564 CGACCTGGAGTTGGCATCAA 60.322 55.000 0.00 0.00 0.00 2.57
447 448 1.679944 CGACCTGGAGTTGGCATCAAT 60.680 52.381 0.00 0.00 35.10 2.57
448 449 1.747355 GACCTGGAGTTGGCATCAATG 59.253 52.381 0.00 0.00 35.10 2.82
449 450 1.076024 ACCTGGAGTTGGCATCAATGT 59.924 47.619 0.00 0.00 35.10 2.71
450 451 1.475280 CCTGGAGTTGGCATCAATGTG 59.525 52.381 0.00 0.00 35.10 3.21
451 452 1.475280 CTGGAGTTGGCATCAATGTGG 59.525 52.381 0.00 0.00 35.10 4.17
452 453 1.075212 TGGAGTTGGCATCAATGTGGA 59.925 47.619 0.00 0.00 35.10 4.02
453 454 2.291735 TGGAGTTGGCATCAATGTGGAT 60.292 45.455 0.00 0.00 35.10 3.41
454 455 2.100252 GGAGTTGGCATCAATGTGGATG 59.900 50.000 0.00 0.00 45.89 3.51
455 456 2.100252 GAGTTGGCATCAATGTGGATGG 59.900 50.000 5.43 0.00 43.85 3.51
459 460 1.930567 GCATCAATGTGGATGGCAAC 58.069 50.000 0.00 0.00 43.85 4.17
473 474 2.611974 GGCAACAACATCGTTGGTAG 57.388 50.000 11.26 1.88 45.21 3.18
474 475 2.147958 GGCAACAACATCGTTGGTAGA 58.852 47.619 11.26 0.00 45.21 2.59
475 476 2.159627 GGCAACAACATCGTTGGTAGAG 59.840 50.000 11.26 0.00 45.21 2.43
476 477 2.159627 GCAACAACATCGTTGGTAGAGG 59.840 50.000 11.26 0.00 45.21 3.69
477 478 2.742053 CAACAACATCGTTGGTAGAGGG 59.258 50.000 11.26 0.00 42.10 4.30
478 479 1.278127 ACAACATCGTTGGTAGAGGGG 59.722 52.381 11.26 0.00 0.00 4.79
479 480 1.553248 CAACATCGTTGGTAGAGGGGA 59.447 52.381 0.00 0.00 0.00 4.81
480 481 1.486211 ACATCGTTGGTAGAGGGGAG 58.514 55.000 0.00 0.00 0.00 4.30
481 482 1.273098 ACATCGTTGGTAGAGGGGAGT 60.273 52.381 0.00 0.00 0.00 3.85
482 483 1.409427 CATCGTTGGTAGAGGGGAGTC 59.591 57.143 0.00 0.00 0.00 3.36
483 484 0.406750 TCGTTGGTAGAGGGGAGTCA 59.593 55.000 0.00 0.00 0.00 3.41
484 485 0.818296 CGTTGGTAGAGGGGAGTCAG 59.182 60.000 0.00 0.00 0.00 3.51
485 486 1.616187 CGTTGGTAGAGGGGAGTCAGA 60.616 57.143 0.00 0.00 0.00 3.27
486 487 2.104170 GTTGGTAGAGGGGAGTCAGAG 58.896 57.143 0.00 0.00 0.00 3.35
487 488 0.631753 TGGTAGAGGGGAGTCAGAGG 59.368 60.000 0.00 0.00 0.00 3.69
488 489 0.632294 GGTAGAGGGGAGTCAGAGGT 59.368 60.000 0.00 0.00 0.00 3.85
489 490 1.007359 GGTAGAGGGGAGTCAGAGGTT 59.993 57.143 0.00 0.00 0.00 3.50
490 491 2.104170 GTAGAGGGGAGTCAGAGGTTG 58.896 57.143 0.00 0.00 0.00 3.77
491 492 0.787084 AGAGGGGAGTCAGAGGTTGA 59.213 55.000 0.00 0.00 0.00 3.18
492 493 1.364328 AGAGGGGAGTCAGAGGTTGAT 59.636 52.381 0.00 0.00 38.29 2.57
493 494 2.587777 AGAGGGGAGTCAGAGGTTGATA 59.412 50.000 0.00 0.00 38.29 2.15
494 495 2.962421 GAGGGGAGTCAGAGGTTGATAG 59.038 54.545 0.00 0.00 38.29 2.08
495 496 2.043227 GGGGAGTCAGAGGTTGATAGG 58.957 57.143 0.00 0.00 38.29 2.57
496 497 2.627217 GGGGAGTCAGAGGTTGATAGGT 60.627 54.545 0.00 0.00 38.29 3.08
497 498 2.432510 GGGAGTCAGAGGTTGATAGGTG 59.567 54.545 0.00 0.00 38.29 4.00
498 499 2.432510 GGAGTCAGAGGTTGATAGGTGG 59.567 54.545 0.00 0.00 38.29 4.61
499 500 1.834263 AGTCAGAGGTTGATAGGTGGC 59.166 52.381 0.00 0.00 38.29 5.01
500 501 1.555075 GTCAGAGGTTGATAGGTGGCA 59.445 52.381 0.00 0.00 38.29 4.92
501 502 2.171448 GTCAGAGGTTGATAGGTGGCAT 59.829 50.000 0.00 0.00 38.29 4.40
502 503 2.171237 TCAGAGGTTGATAGGTGGCATG 59.829 50.000 0.00 0.00 0.00 4.06
503 504 2.092753 CAGAGGTTGATAGGTGGCATGT 60.093 50.000 0.00 0.00 0.00 3.21
504 505 2.092753 AGAGGTTGATAGGTGGCATGTG 60.093 50.000 0.00 0.00 0.00 3.21
505 506 0.740737 GGTTGATAGGTGGCATGTGC 59.259 55.000 0.00 0.00 41.14 4.57
506 507 0.378257 GTTGATAGGTGGCATGTGCG 59.622 55.000 0.00 0.00 43.26 5.34
507 508 0.747644 TTGATAGGTGGCATGTGCGG 60.748 55.000 0.00 0.00 43.26 5.69
508 509 1.893808 GATAGGTGGCATGTGCGGG 60.894 63.158 0.00 0.00 43.26 6.13
509 510 3.420206 ATAGGTGGCATGTGCGGGG 62.420 63.158 0.00 0.00 43.26 5.73
531 532 3.884900 GCTAGCGCGGGAGAAAAA 58.115 55.556 8.83 0.00 0.00 1.94
532 533 1.716172 GCTAGCGCGGGAGAAAAAG 59.284 57.895 8.83 0.00 0.00 2.27
533 534 1.716172 CTAGCGCGGGAGAAAAAGC 59.284 57.895 8.83 0.00 0.00 3.51
534 535 1.706287 CTAGCGCGGGAGAAAAAGCC 61.706 60.000 8.83 0.00 0.00 4.35
535 536 2.457743 TAGCGCGGGAGAAAAAGCCA 62.458 55.000 8.83 0.00 0.00 4.75
536 537 2.561373 CGCGGGAGAAAAAGCCAC 59.439 61.111 0.00 0.00 0.00 5.01
537 538 2.258013 CGCGGGAGAAAAAGCCACA 61.258 57.895 0.00 0.00 0.00 4.17
538 539 1.285950 GCGGGAGAAAAAGCCACAC 59.714 57.895 0.00 0.00 0.00 3.82
539 540 1.172812 GCGGGAGAAAAAGCCACACT 61.173 55.000 0.00 0.00 0.00 3.55
540 541 1.318576 CGGGAGAAAAAGCCACACTT 58.681 50.000 0.00 0.00 41.70 3.16
541 542 2.500229 CGGGAGAAAAAGCCACACTTA 58.500 47.619 0.00 0.00 37.75 2.24
542 543 2.484264 CGGGAGAAAAAGCCACACTTAG 59.516 50.000 0.00 0.00 37.75 2.18
543 544 3.751518 GGGAGAAAAAGCCACACTTAGA 58.248 45.455 0.00 0.00 37.75 2.10
544 545 3.753797 GGGAGAAAAAGCCACACTTAGAG 59.246 47.826 0.00 0.00 37.75 2.43
545 546 4.390264 GGAGAAAAAGCCACACTTAGAGT 58.610 43.478 0.00 0.00 37.75 3.24
557 558 2.032620 ACTTAGAGTGATGGCTACGGG 58.967 52.381 0.00 0.00 0.00 5.28
558 559 2.032620 CTTAGAGTGATGGCTACGGGT 58.967 52.381 0.00 0.00 0.00 5.28
559 560 1.399714 TAGAGTGATGGCTACGGGTG 58.600 55.000 0.00 0.00 0.00 4.61
560 561 1.144057 GAGTGATGGCTACGGGTGG 59.856 63.158 0.00 0.00 0.00 4.61
561 562 2.513897 GTGATGGCTACGGGTGGC 60.514 66.667 0.00 0.00 36.25 5.01
562 563 4.155733 TGATGGCTACGGGTGGCG 62.156 66.667 1.00 0.00 38.00 5.69
563 564 4.910585 GATGGCTACGGGTGGCGG 62.911 72.222 1.00 0.00 38.00 6.13
568 569 3.428282 CTACGGGTGGCGGCAAAC 61.428 66.667 15.50 10.09 0.00 2.93
579 580 2.983592 GGCAAACCGGTGGAGGTG 60.984 66.667 8.52 2.76 45.21 4.00
580 581 2.983592 GCAAACCGGTGGAGGTGG 60.984 66.667 8.52 0.00 45.21 4.61
581 582 2.513895 CAAACCGGTGGAGGTGGT 59.486 61.111 8.52 0.00 45.21 4.16
582 583 1.756024 CAAACCGGTGGAGGTGGTA 59.244 57.895 8.52 0.00 45.21 3.25
583 584 0.321298 CAAACCGGTGGAGGTGGTAG 60.321 60.000 8.52 0.00 45.21 3.18
584 585 2.120737 AAACCGGTGGAGGTGGTAGC 62.121 60.000 8.52 0.00 45.21 3.58
585 586 2.683933 CCGGTGGAGGTGGTAGCT 60.684 66.667 0.00 0.00 0.00 3.32
586 587 2.291043 CCGGTGGAGGTGGTAGCTT 61.291 63.158 0.00 0.00 0.00 3.74
587 588 1.079127 CGGTGGAGGTGGTAGCTTG 60.079 63.158 0.00 0.00 0.00 4.01
588 589 1.299976 GGTGGAGGTGGTAGCTTGG 59.700 63.158 0.00 0.00 0.00 3.61
589 590 1.198759 GGTGGAGGTGGTAGCTTGGA 61.199 60.000 0.00 0.00 0.00 3.53
590 591 0.250513 GTGGAGGTGGTAGCTTGGAG 59.749 60.000 0.00 0.00 0.00 3.86
591 592 0.116342 TGGAGGTGGTAGCTTGGAGA 59.884 55.000 0.00 0.00 0.00 3.71
592 593 0.827368 GGAGGTGGTAGCTTGGAGAG 59.173 60.000 0.00 0.00 0.00 3.20
593 594 0.827368 GAGGTGGTAGCTTGGAGAGG 59.173 60.000 0.00 0.00 0.00 3.69
594 595 0.618968 AGGTGGTAGCTTGGAGAGGG 60.619 60.000 0.00 0.00 0.00 4.30
595 596 1.222113 GTGGTAGCTTGGAGAGGGC 59.778 63.158 0.00 0.00 0.00 5.19
596 597 2.359169 TGGTAGCTTGGAGAGGGCG 61.359 63.158 0.00 0.00 0.00 6.13
597 598 2.501610 GTAGCTTGGAGAGGGCGG 59.498 66.667 0.00 0.00 0.00 6.13
598 599 2.764128 TAGCTTGGAGAGGGCGGG 60.764 66.667 0.00 0.00 0.00 6.13
641 642 2.851824 GCAAATTGCCCGACTAATTTCG 59.148 45.455 6.72 0.00 37.42 3.46
642 643 3.426963 GCAAATTGCCCGACTAATTTCGA 60.427 43.478 6.72 0.00 38.15 3.71
643 644 4.728534 CAAATTGCCCGACTAATTTCGAA 58.271 39.130 0.00 0.00 41.78 3.71
644 645 4.616181 AATTGCCCGACTAATTTCGAAG 57.384 40.909 0.00 0.00 41.78 3.79
645 646 2.018542 TGCCCGACTAATTTCGAAGG 57.981 50.000 0.00 0.00 41.78 3.46
646 647 1.551430 TGCCCGACTAATTTCGAAGGA 59.449 47.619 0.00 0.00 41.78 3.36
647 648 1.931841 GCCCGACTAATTTCGAAGGAC 59.068 52.381 0.00 0.00 41.78 3.85
648 649 2.190981 CCCGACTAATTTCGAAGGACG 58.809 52.381 0.00 3.20 41.78 4.79
649 650 2.190981 CCGACTAATTTCGAAGGACGG 58.809 52.381 14.19 14.19 41.78 4.79
650 651 1.587034 CGACTAATTTCGAAGGACGGC 59.413 52.381 0.00 0.00 41.78 5.68
651 652 1.587034 GACTAATTTCGAAGGACGGCG 59.413 52.381 4.80 4.80 42.82 6.46
652 653 0.928229 CTAATTTCGAAGGACGGCGG 59.072 55.000 13.24 0.00 42.82 6.13
653 654 0.460635 TAATTTCGAAGGACGGCGGG 60.461 55.000 13.24 0.00 42.82 6.13
654 655 2.175035 AATTTCGAAGGACGGCGGGA 62.175 55.000 13.24 0.00 42.82 5.14
655 656 2.175035 ATTTCGAAGGACGGCGGGAA 62.175 55.000 13.24 1.80 42.82 3.97
656 657 2.775032 TTTCGAAGGACGGCGGGAAG 62.775 60.000 13.24 0.00 42.82 3.46
657 658 4.814294 CGAAGGACGGCGGGAAGG 62.814 72.222 13.24 0.00 38.46 3.46
666 667 2.043953 GCGGGAAGGCCAGGAATT 60.044 61.111 5.01 0.00 35.15 2.17
667 668 2.418083 GCGGGAAGGCCAGGAATTG 61.418 63.158 5.01 0.00 35.15 2.32
668 669 1.302949 CGGGAAGGCCAGGAATTGA 59.697 57.895 5.01 0.00 35.15 2.57
669 670 0.106519 CGGGAAGGCCAGGAATTGAT 60.107 55.000 5.01 0.00 35.15 2.57
670 671 1.406903 GGGAAGGCCAGGAATTGATG 58.593 55.000 5.01 0.00 35.15 3.07
671 672 1.063717 GGGAAGGCCAGGAATTGATGA 60.064 52.381 5.01 0.00 35.15 2.92
672 673 2.027385 GGAAGGCCAGGAATTGATGAC 58.973 52.381 5.01 0.00 0.00 3.06
673 674 1.672881 GAAGGCCAGGAATTGATGACG 59.327 52.381 5.01 0.00 0.00 4.35
674 675 0.107017 AGGCCAGGAATTGATGACGG 60.107 55.000 5.01 0.00 0.00 4.79
675 676 0.394352 GGCCAGGAATTGATGACGGT 60.394 55.000 0.00 0.00 0.00 4.83
676 677 1.134220 GGCCAGGAATTGATGACGGTA 60.134 52.381 0.00 0.00 0.00 4.02
677 678 2.213499 GCCAGGAATTGATGACGGTAG 58.787 52.381 0.00 0.00 0.00 3.18
678 679 2.838736 CCAGGAATTGATGACGGTAGG 58.161 52.381 0.00 0.00 0.00 3.18
679 680 2.434336 CCAGGAATTGATGACGGTAGGA 59.566 50.000 0.00 0.00 0.00 2.94
680 681 3.493350 CCAGGAATTGATGACGGTAGGAG 60.493 52.174 0.00 0.00 0.00 3.69
681 682 2.700897 AGGAATTGATGACGGTAGGAGG 59.299 50.000 0.00 0.00 0.00 4.30
682 683 2.698797 GGAATTGATGACGGTAGGAGGA 59.301 50.000 0.00 0.00 0.00 3.71
683 684 3.134081 GGAATTGATGACGGTAGGAGGAA 59.866 47.826 0.00 0.00 0.00 3.36
684 685 4.372656 GAATTGATGACGGTAGGAGGAAG 58.627 47.826 0.00 0.00 0.00 3.46
685 686 2.820728 TGATGACGGTAGGAGGAAGA 57.179 50.000 0.00 0.00 0.00 2.87
686 687 3.095912 TGATGACGGTAGGAGGAAGAA 57.904 47.619 0.00 0.00 0.00 2.52
687 688 3.024547 TGATGACGGTAGGAGGAAGAAG 58.975 50.000 0.00 0.00 0.00 2.85
688 689 2.599408 TGACGGTAGGAGGAAGAAGT 57.401 50.000 0.00 0.00 0.00 3.01
689 690 2.885616 TGACGGTAGGAGGAAGAAGTT 58.114 47.619 0.00 0.00 0.00 2.66
690 691 2.824341 TGACGGTAGGAGGAAGAAGTTC 59.176 50.000 0.00 0.00 0.00 3.01
691 692 3.090790 GACGGTAGGAGGAAGAAGTTCT 58.909 50.000 0.00 0.00 32.72 3.01
692 693 2.826725 ACGGTAGGAGGAAGAAGTTCTG 59.173 50.000 6.06 0.00 32.72 3.02
693 694 3.090037 CGGTAGGAGGAAGAAGTTCTGA 58.910 50.000 6.06 0.00 32.72 3.27
694 695 3.119424 CGGTAGGAGGAAGAAGTTCTGAC 60.119 52.174 6.06 2.54 32.72 3.51
695 696 3.119424 GGTAGGAGGAAGAAGTTCTGACG 60.119 52.174 6.06 0.00 32.72 4.35
696 697 2.877866 AGGAGGAAGAAGTTCTGACGA 58.122 47.619 6.06 0.00 32.72 4.20
697 698 3.231818 AGGAGGAAGAAGTTCTGACGAA 58.768 45.455 6.06 0.00 32.72 3.85
698 699 3.641906 AGGAGGAAGAAGTTCTGACGAAA 59.358 43.478 6.06 0.00 32.72 3.46
699 700 4.101119 AGGAGGAAGAAGTTCTGACGAAAA 59.899 41.667 6.06 0.00 32.72 2.29
700 701 4.814771 GGAGGAAGAAGTTCTGACGAAAAA 59.185 41.667 6.06 0.00 32.72 1.94
701 702 5.277393 GGAGGAAGAAGTTCTGACGAAAAAC 60.277 44.000 6.06 0.00 32.72 2.43
702 703 5.429130 AGGAAGAAGTTCTGACGAAAAACT 58.571 37.500 6.06 0.00 34.81 2.66
703 704 6.579865 AGGAAGAAGTTCTGACGAAAAACTA 58.420 36.000 6.06 0.00 33.08 2.24
704 705 7.046033 AGGAAGAAGTTCTGACGAAAAACTAA 58.954 34.615 6.06 0.00 33.08 2.24
705 706 7.011202 AGGAAGAAGTTCTGACGAAAAACTAAC 59.989 37.037 6.06 0.00 33.08 2.34
706 707 7.011202 GGAAGAAGTTCTGACGAAAAACTAACT 59.989 37.037 6.06 0.00 33.08 2.24
707 708 7.845066 AGAAGTTCTGACGAAAAACTAACTT 57.155 32.000 4.10 0.00 38.14 2.66
708 709 7.685594 AGAAGTTCTGACGAAAAACTAACTTG 58.314 34.615 4.10 0.00 36.22 3.16
709 710 5.807344 AGTTCTGACGAAAAACTAACTTGC 58.193 37.500 0.00 0.00 31.68 4.01
710 711 5.353123 AGTTCTGACGAAAAACTAACTTGCA 59.647 36.000 0.00 0.00 31.68 4.08
711 712 5.151632 TCTGACGAAAAACTAACTTGCAC 57.848 39.130 0.00 0.00 0.00 4.57
712 713 4.632251 TCTGACGAAAAACTAACTTGCACA 59.368 37.500 0.00 0.00 0.00 4.57
713 714 5.295787 TCTGACGAAAAACTAACTTGCACAT 59.704 36.000 0.00 0.00 0.00 3.21
714 715 5.270083 TGACGAAAAACTAACTTGCACATG 58.730 37.500 0.00 0.00 0.00 3.21
715 716 5.065346 TGACGAAAAACTAACTTGCACATGA 59.935 36.000 0.00 0.00 0.00 3.07
716 717 5.885881 ACGAAAAACTAACTTGCACATGAA 58.114 33.333 0.00 0.00 0.00 2.57
717 718 6.326375 ACGAAAAACTAACTTGCACATGAAA 58.674 32.000 0.00 0.00 0.00 2.69
718 719 6.809196 ACGAAAAACTAACTTGCACATGAAAA 59.191 30.769 0.00 0.00 0.00 2.29
719 720 7.329717 ACGAAAAACTAACTTGCACATGAAAAA 59.670 29.630 0.00 0.00 0.00 1.94
836 837 4.953579 AGAAGTGGTAAAAAGGTGCAAGAA 59.046 37.500 0.00 0.00 0.00 2.52
845 846 4.773323 AAAGGTGCAAGAAGCTGTTATC 57.227 40.909 0.00 0.00 45.94 1.75
865 866 1.878088 CAGTTGATCACACTGCAGCTT 59.122 47.619 15.27 0.00 0.00 3.74
908 909 1.202830 ACTCCCGCCATTTACACAACA 60.203 47.619 0.00 0.00 0.00 3.33
922 923 2.296471 ACACAACAAAAACCAACGGTCA 59.704 40.909 0.00 0.00 33.12 4.02
1023 1024 0.965866 CAGCTCTCCACCACCTCGTA 60.966 60.000 0.00 0.00 0.00 3.43
1031 1032 3.066190 CCACCTCGTACTCCCGCA 61.066 66.667 0.00 0.00 0.00 5.69
1111 1112 4.316823 TCCTCCACCTGCTCCCGT 62.317 66.667 0.00 0.00 0.00 5.28
1221 1225 2.364317 TCTTCCCAGGGAGCGGAG 60.364 66.667 8.67 3.13 31.21 4.63
1546 1550 5.750067 GTGTTTGATGAAATGTCTTTGCTGT 59.250 36.000 0.00 0.00 0.00 4.40
1552 1556 7.267128 TGATGAAATGTCTTTGCTGTTTCTTT 58.733 30.769 0.00 0.00 31.79 2.52
1566 1570 5.122711 GCTGTTTCTTTACGGCCTTGTATTA 59.877 40.000 0.00 0.00 43.17 0.98
1644 1648 2.503356 AGCTCTTGGAGATACAAGGTGG 59.497 50.000 4.98 0.00 46.04 4.61
1672 1683 2.633967 AGTGCAAAATTCCATGCCTTCA 59.366 40.909 7.97 0.00 41.87 3.02
1673 1684 3.262405 AGTGCAAAATTCCATGCCTTCAT 59.738 39.130 7.97 0.00 41.87 2.57
1721 1732 8.786826 TTTTGTGGATTAGTAGTTACCTGATG 57.213 34.615 0.00 0.00 0.00 3.07
1722 1733 6.479972 TGTGGATTAGTAGTTACCTGATGG 57.520 41.667 0.00 0.00 39.83 3.51
1723 1734 6.199376 TGTGGATTAGTAGTTACCTGATGGA 58.801 40.000 0.00 0.00 37.04 3.41
1805 1820 4.253685 CAACGATGGGTGTGAAAGAGTAT 58.746 43.478 0.00 0.00 0.00 2.12
1865 1880 7.586747 TCATAAACGCGAATAAAGACCTTTTT 58.413 30.769 15.93 0.00 34.23 1.94
1901 1916 4.279169 ACATTTGATGATTTCCTATGGGCG 59.721 41.667 0.00 0.00 0.00 6.13
1919 1934 2.601741 GGCGTTCGGAGTACTAAGATCG 60.602 54.545 18.53 18.53 0.00 3.69
1955 1970 1.224592 CCGTGGGGATAAGCTTGCT 59.775 57.895 9.86 0.00 34.06 3.91
2001 2016 8.567948 TGGTAAGATCTTTGAACTCAAAACATC 58.432 33.333 14.36 9.81 44.24 3.06
2016 2032 4.927267 AAACATCCCTACATGGTCTGAA 57.073 40.909 0.00 0.00 0.00 3.02
2040 2056 2.225242 TGCTTATCCAAAAGGCTCCCAA 60.225 45.455 0.00 0.00 0.00 4.12
2051 2067 1.988107 AGGCTCCCAAGTCAATTCTCA 59.012 47.619 0.00 0.00 0.00 3.27
2185 2248 7.599998 ACTTTGCCAAATCAGATAAATCACAAC 59.400 33.333 0.00 0.00 0.00 3.32
2230 2293 4.141041 TCCTGTTGGGAGATCAAAGGAAAA 60.141 41.667 0.00 0.00 39.58 2.29
2233 2296 4.141041 TGTTGGGAGATCAAAGGAAAAGGA 60.141 41.667 0.00 0.00 0.00 3.36
2274 2337 1.503818 TTCTCTTTGCGGACGCCAAC 61.504 55.000 14.61 0.00 41.09 3.77
2275 2338 2.203084 TCTTTGCGGACGCCAACA 60.203 55.556 14.61 0.00 41.09 3.33
2319 2382 6.707608 CAGGCATGCATCAACTTCTATTACTA 59.292 38.462 21.36 0.00 0.00 1.82
2322 2385 7.388776 GGCATGCATCAACTTCTATTACTATCA 59.611 37.037 21.36 0.00 0.00 2.15
2370 2438 6.583806 CACAATCTTTCATAACCAGCAGTTTC 59.416 38.462 0.00 0.00 40.05 2.78
2433 2501 3.127548 ACAAGAGTAATGCTGAATTGGCG 59.872 43.478 0.00 0.00 0.00 5.69
2649 2717 2.742372 CTTGGGGGAACAGACGCG 60.742 66.667 3.53 3.53 0.00 6.01
2709 2777 0.839946 ACCTTGAACTGCCTGTGAGT 59.160 50.000 0.00 0.00 0.00 3.41
2763 2831 4.674080 CCAGAATGCCTGCAAATCTGCC 62.674 54.545 22.72 0.92 41.15 4.85
2772 2840 1.217244 CAAATCTGCCCTTGCTGCC 59.783 57.895 0.00 0.00 38.71 4.85
2795 2863 1.407437 CCACACCACCATAGAAGAGGC 60.407 57.143 0.00 0.00 0.00 4.70
3034 3103 3.698289 TGACCTTGAGTACTACCAGGAG 58.302 50.000 17.56 0.41 0.00 3.69
3115 3184 4.078571 TCCTAGGGACAGATTGTACATCCT 60.079 45.833 9.46 2.64 31.17 3.24
3116 3185 5.135533 TCCTAGGGACAGATTGTACATCCTA 59.864 44.000 9.46 6.89 31.17 2.94
3117 3186 6.019748 CCTAGGGACAGATTGTACATCCTAT 58.980 44.000 11.32 4.78 31.17 2.57
3118 3187 7.019254 TCCTAGGGACAGATTGTACATCCTATA 59.981 40.741 9.46 5.51 31.17 1.31
3184 3257 7.209471 TGGGTTCACACATTATTAACAAGTC 57.791 36.000 0.00 0.00 0.00 3.01
3226 3299 8.347004 TCTGTGCCATAATCAATAAAACAGAA 57.653 30.769 0.00 0.00 38.73 3.02
3446 3520 7.348080 TGGATCATATCGTCCATTATAGTCC 57.652 40.000 0.00 0.00 39.51 3.85
3447 3521 7.126061 TGGATCATATCGTCCATTATAGTCCT 58.874 38.462 0.00 0.00 39.51 3.85
3448 3522 8.279361 TGGATCATATCGTCCATTATAGTCCTA 58.721 37.037 0.00 0.00 39.51 2.94
3449 3523 8.788806 GGATCATATCGTCCATTATAGTCCTAG 58.211 40.741 0.00 0.00 34.57 3.02
3450 3524 9.344772 GATCATATCGTCCATTATAGTCCTAGT 57.655 37.037 0.00 0.00 0.00 2.57
3451 3525 8.507524 TCATATCGTCCATTATAGTCCTAGTG 57.492 38.462 0.00 0.00 0.00 2.74
3507 3581 2.791347 TCTGTCTCTACTCCGAGCTT 57.209 50.000 0.00 0.00 0.00 3.74
3572 3772 1.134788 AGCGGTTTAGCGTGCTAGATT 60.135 47.619 1.39 0.00 43.00 2.40
3880 4106 1.986413 CCCTCAGTTCTGTCCCAGG 59.014 63.158 0.00 0.00 31.51 4.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.280215 CCCATCAAACTTCAAGTCCTAGACT 60.280 44.000 0.00 0.00 45.64 3.24
1 2 4.938226 CCCATCAAACTTCAAGTCCTAGAC 59.062 45.833 0.00 0.00 0.00 2.59
2 3 4.565652 GCCCATCAAACTTCAAGTCCTAGA 60.566 45.833 0.00 0.00 0.00 2.43
3 4 3.691609 GCCCATCAAACTTCAAGTCCTAG 59.308 47.826 0.00 0.00 0.00 3.02
4 5 3.561313 GGCCCATCAAACTTCAAGTCCTA 60.561 47.826 0.00 0.00 0.00 2.94
5 6 2.519013 GCCCATCAAACTTCAAGTCCT 58.481 47.619 0.00 0.00 0.00 3.85
6 7 1.546029 GGCCCATCAAACTTCAAGTCC 59.454 52.381 0.00 0.00 0.00 3.85
7 8 1.200020 CGGCCCATCAAACTTCAAGTC 59.800 52.381 0.00 0.00 0.00 3.01
8 9 1.247567 CGGCCCATCAAACTTCAAGT 58.752 50.000 0.00 0.00 0.00 3.16
9 10 0.527565 CCGGCCCATCAAACTTCAAG 59.472 55.000 0.00 0.00 0.00 3.02
10 11 0.897863 CCCGGCCCATCAAACTTCAA 60.898 55.000 0.00 0.00 0.00 2.69
11 12 1.304052 CCCGGCCCATCAAACTTCA 60.304 57.895 0.00 0.00 0.00 3.02
12 13 2.052104 CCCCGGCCCATCAAACTTC 61.052 63.158 0.00 0.00 0.00 3.01
13 14 1.874299 ATCCCCGGCCCATCAAACTT 61.874 55.000 0.00 0.00 0.00 2.66
14 15 0.991355 TATCCCCGGCCCATCAAACT 60.991 55.000 0.00 0.00 0.00 2.66
15 16 0.822121 GTATCCCCGGCCCATCAAAC 60.822 60.000 0.00 0.00 0.00 2.93
16 17 1.534697 GTATCCCCGGCCCATCAAA 59.465 57.895 0.00 0.00 0.00 2.69
17 18 2.457323 GGTATCCCCGGCCCATCAA 61.457 63.158 0.00 0.00 0.00 2.57
18 19 2.852075 GGTATCCCCGGCCCATCA 60.852 66.667 0.00 0.00 0.00 3.07
19 20 1.789576 AATGGTATCCCCGGCCCATC 61.790 60.000 0.00 0.00 36.69 3.51
20 21 1.778383 AATGGTATCCCCGGCCCAT 60.778 57.895 0.00 0.00 39.34 4.00
21 22 2.369015 AATGGTATCCCCGGCCCA 60.369 61.111 0.00 0.00 35.15 5.36
22 23 2.115266 CAATGGTATCCCCGGCCC 59.885 66.667 0.00 0.00 35.15 5.80
23 24 2.115266 CCAATGGTATCCCCGGCC 59.885 66.667 0.00 0.00 35.15 6.13
24 25 2.597510 GCCAATGGTATCCCCGGC 60.598 66.667 0.00 0.00 35.15 6.13
25 26 2.006805 AAGGCCAATGGTATCCCCGG 62.007 60.000 5.01 0.00 35.15 5.73
26 27 0.537371 GAAGGCCAATGGTATCCCCG 60.537 60.000 5.01 0.00 35.15 5.73
27 28 0.853530 AGAAGGCCAATGGTATCCCC 59.146 55.000 5.01 0.00 0.00 4.81
28 29 3.487372 GTTAGAAGGCCAATGGTATCCC 58.513 50.000 5.01 0.00 0.00 3.85
29 30 3.117663 TGGTTAGAAGGCCAATGGTATCC 60.118 47.826 5.01 0.00 0.00 2.59
30 31 4.164843 TGGTTAGAAGGCCAATGGTATC 57.835 45.455 5.01 0.00 0.00 2.24
31 32 4.447762 GGATGGTTAGAAGGCCAATGGTAT 60.448 45.833 5.01 0.00 38.38 2.73
32 33 3.117663 GGATGGTTAGAAGGCCAATGGTA 60.118 47.826 5.01 0.00 38.38 3.25
33 34 2.358195 GGATGGTTAGAAGGCCAATGGT 60.358 50.000 5.01 0.00 38.38 3.55
34 35 2.310538 GGATGGTTAGAAGGCCAATGG 58.689 52.381 5.01 0.00 38.38 3.16
35 36 3.017048 TGGATGGTTAGAAGGCCAATG 57.983 47.619 5.01 0.00 38.38 2.82
36 37 3.365472 GTTGGATGGTTAGAAGGCCAAT 58.635 45.455 5.01 0.00 37.68 3.16
37 38 2.556559 GGTTGGATGGTTAGAAGGCCAA 60.557 50.000 5.01 0.00 38.38 4.52
38 39 1.005450 GGTTGGATGGTTAGAAGGCCA 59.995 52.381 5.01 0.00 39.33 5.36
39 40 1.005450 TGGTTGGATGGTTAGAAGGCC 59.995 52.381 0.00 0.00 0.00 5.19
40 41 2.092323 GTGGTTGGATGGTTAGAAGGC 58.908 52.381 0.00 0.00 0.00 4.35
41 42 3.721087 AGTGGTTGGATGGTTAGAAGG 57.279 47.619 0.00 0.00 0.00 3.46
42 43 5.422214 ACTAGTGGTTGGATGGTTAGAAG 57.578 43.478 0.00 0.00 0.00 2.85
43 44 5.836024 AACTAGTGGTTGGATGGTTAGAA 57.164 39.130 0.00 0.00 36.70 2.10
58 59 3.862845 GGTTGTTTGCAAACCAACTAGTG 59.137 43.478 32.35 0.00 36.34 2.74
59 60 3.511934 TGGTTGTTTGCAAACCAACTAGT 59.488 39.130 32.35 0.00 41.44 2.57
60 61 4.116747 TGGTTGTTTGCAAACCAACTAG 57.883 40.909 32.35 0.00 41.44 2.57
61 62 4.744795 ATGGTTGTTTGCAAACCAACTA 57.255 36.364 32.35 30.21 41.44 2.24
62 63 3.625649 ATGGTTGTTTGCAAACCAACT 57.374 38.095 32.35 22.23 41.44 3.16
63 64 3.686726 TCAATGGTTGTTTGCAAACCAAC 59.313 39.130 33.33 31.06 41.44 3.77
64 65 3.942829 TCAATGGTTGTTTGCAAACCAA 58.057 36.364 33.33 24.69 41.44 3.67
65 66 3.616956 TCAATGGTTGTTTGCAAACCA 57.383 38.095 33.33 27.12 41.44 3.67
66 67 4.211794 CAGATCAATGGTTGTTTGCAAACC 59.788 41.667 33.33 22.78 41.44 3.27
67 68 4.211794 CCAGATCAATGGTTGTTTGCAAAC 59.788 41.667 30.95 30.95 42.42 2.93
68 69 4.378774 CCAGATCAATGGTTGTTTGCAAA 58.621 39.130 8.05 8.05 36.22 3.68
69 70 3.992643 CCAGATCAATGGTTGTTTGCAA 58.007 40.909 0.00 0.00 35.47 4.08
70 71 3.663995 CCAGATCAATGGTTGTTTGCA 57.336 42.857 0.00 0.00 35.47 4.08
79 80 5.053145 GTGTTCTAGCTACCAGATCAATGG 58.947 45.833 0.00 0.00 46.47 3.16
80 81 5.521735 GTGTGTTCTAGCTACCAGATCAATG 59.478 44.000 0.00 0.00 0.00 2.82
81 82 5.665459 GTGTGTTCTAGCTACCAGATCAAT 58.335 41.667 0.00 0.00 0.00 2.57
82 83 4.380550 CGTGTGTTCTAGCTACCAGATCAA 60.381 45.833 0.00 0.00 0.00 2.57
83 84 3.128764 CGTGTGTTCTAGCTACCAGATCA 59.871 47.826 0.00 0.00 0.00 2.92
84 85 3.696898 CGTGTGTTCTAGCTACCAGATC 58.303 50.000 0.00 0.00 0.00 2.75
85 86 2.159226 GCGTGTGTTCTAGCTACCAGAT 60.159 50.000 0.00 0.00 0.00 2.90
86 87 1.201647 GCGTGTGTTCTAGCTACCAGA 59.798 52.381 0.00 0.00 0.00 3.86
87 88 1.202582 AGCGTGTGTTCTAGCTACCAG 59.797 52.381 0.00 0.00 38.29 4.00
88 89 1.254026 AGCGTGTGTTCTAGCTACCA 58.746 50.000 0.00 0.00 38.29 3.25
89 90 2.365408 AAGCGTGTGTTCTAGCTACC 57.635 50.000 0.00 0.00 39.25 3.18
90 91 4.089636 GTGTTAAGCGTGTGTTCTAGCTAC 59.910 45.833 0.00 0.00 39.25 3.58
91 92 4.022589 AGTGTTAAGCGTGTGTTCTAGCTA 60.023 41.667 0.00 0.00 39.25 3.32
92 93 3.057734 GTGTTAAGCGTGTGTTCTAGCT 58.942 45.455 0.00 0.00 42.35 3.32
93 94 3.057734 AGTGTTAAGCGTGTGTTCTAGC 58.942 45.455 0.00 0.00 0.00 3.42
94 95 5.862323 ACATAGTGTTAAGCGTGTGTTCTAG 59.138 40.000 0.00 0.00 0.00 2.43
95 96 5.631929 CACATAGTGTTAAGCGTGTGTTCTA 59.368 40.000 0.00 0.00 34.00 2.10
96 97 4.447724 CACATAGTGTTAAGCGTGTGTTCT 59.552 41.667 0.00 0.00 34.00 3.01
97 98 4.698276 CACATAGTGTTAAGCGTGTGTTC 58.302 43.478 0.00 0.00 34.00 3.18
98 99 3.059188 GCACATAGTGTTAAGCGTGTGTT 60.059 43.478 0.00 0.00 39.19 3.32
99 100 2.478894 GCACATAGTGTTAAGCGTGTGT 59.521 45.455 0.00 0.00 39.19 3.72
100 101 2.472235 CGCACATAGTGTTAAGCGTGTG 60.472 50.000 0.00 0.00 40.25 3.82
101 102 1.724623 CGCACATAGTGTTAAGCGTGT 59.275 47.619 0.00 0.00 40.25 4.49
102 103 2.419565 CGCACATAGTGTTAAGCGTG 57.580 50.000 0.00 0.00 40.25 5.34
111 112 4.403015 TTTTCATGACACGCACATAGTG 57.597 40.909 0.00 0.00 44.57 2.74
112 113 6.735678 TTATTTTCATGACACGCACATAGT 57.264 33.333 0.00 0.00 0.00 2.12
113 114 8.619146 AAATTATTTTCATGACACGCACATAG 57.381 30.769 0.00 0.00 0.00 2.23
115 116 9.585099 AATAAATTATTTTCATGACACGCACAT 57.415 25.926 0.00 0.00 0.00 3.21
116 117 8.978564 AATAAATTATTTTCATGACACGCACA 57.021 26.923 0.00 0.00 0.00 4.57
134 135 8.833264 CGTGTGTCGAACGAAAATAAATAAATT 58.167 29.630 1.95 0.00 43.68 1.82
135 136 8.222433 TCGTGTGTCGAACGAAAATAAATAAAT 58.778 29.630 8.29 0.00 46.30 1.40
136 137 7.562412 TCGTGTGTCGAACGAAAATAAATAAA 58.438 30.769 8.29 0.00 46.30 1.40
137 138 7.103159 TCGTGTGTCGAACGAAAATAAATAA 57.897 32.000 8.29 0.00 46.30 1.40
138 139 6.687653 TCGTGTGTCGAACGAAAATAAATA 57.312 33.333 8.29 0.00 46.30 1.40
139 140 5.579384 TCGTGTGTCGAACGAAAATAAAT 57.421 34.783 8.29 0.00 46.30 1.40
151 152 1.656263 GCGTTGTCTCGTGTGTCGA 60.656 57.895 0.00 0.00 46.83 4.20
152 153 1.206745 AAGCGTTGTCTCGTGTGTCG 61.207 55.000 0.00 0.00 41.41 4.35
153 154 0.928229 AAAGCGTTGTCTCGTGTGTC 59.072 50.000 0.00 0.00 0.00 3.67
154 155 1.365699 AAAAGCGTTGTCTCGTGTGT 58.634 45.000 0.00 0.00 0.00 3.72
155 156 3.788434 ATAAAAGCGTTGTCTCGTGTG 57.212 42.857 0.00 0.00 0.00 3.82
156 157 4.986659 ACTAATAAAAGCGTTGTCTCGTGT 59.013 37.500 0.00 0.00 0.00 4.49
157 158 5.511088 ACTAATAAAAGCGTTGTCTCGTG 57.489 39.130 0.00 0.00 0.00 4.35
158 159 7.543172 TCATTACTAATAAAAGCGTTGTCTCGT 59.457 33.333 0.00 0.00 0.00 4.18
159 160 7.839837 GTCATTACTAATAAAAGCGTTGTCTCG 59.160 37.037 0.00 0.00 0.00 4.04
160 161 8.653338 TGTCATTACTAATAAAAGCGTTGTCTC 58.347 33.333 0.00 0.00 0.00 3.36
161 162 8.440833 GTGTCATTACTAATAAAAGCGTTGTCT 58.559 33.333 0.00 0.00 0.00 3.41
162 163 8.225107 TGTGTCATTACTAATAAAAGCGTTGTC 58.775 33.333 0.00 0.00 0.00 3.18
163 164 8.013378 GTGTGTCATTACTAATAAAAGCGTTGT 58.987 33.333 0.00 0.00 0.00 3.32
164 165 7.213706 CGTGTGTCATTACTAATAAAAGCGTTG 59.786 37.037 0.00 0.00 0.00 4.10
165 166 7.095523 ACGTGTGTCATTACTAATAAAAGCGTT 60.096 33.333 0.00 0.00 0.00 4.84
166 167 6.366877 ACGTGTGTCATTACTAATAAAAGCGT 59.633 34.615 0.00 0.00 0.00 5.07
167 168 6.758149 ACGTGTGTCATTACTAATAAAAGCG 58.242 36.000 0.00 0.00 0.00 4.68
168 169 9.469239 GTTACGTGTGTCATTACTAATAAAAGC 57.531 33.333 0.00 0.00 0.00 3.51
169 170 9.666163 CGTTACGTGTGTCATTACTAATAAAAG 57.334 33.333 0.00 0.00 0.00 2.27
170 171 9.190858 ACGTTACGTGTGTCATTACTAATAAAA 57.809 29.630 10.39 0.00 39.18 1.52
171 172 8.741101 ACGTTACGTGTGTCATTACTAATAAA 57.259 30.769 10.39 0.00 39.18 1.40
172 173 8.637704 CAACGTTACGTGTGTCATTACTAATAA 58.362 33.333 12.23 0.00 39.99 1.40
173 174 7.201342 GCAACGTTACGTGTGTCATTACTAATA 60.201 37.037 12.23 0.00 39.99 0.98
174 175 6.400303 GCAACGTTACGTGTGTCATTACTAAT 60.400 38.462 12.23 0.00 39.99 1.73
175 176 5.107913 GCAACGTTACGTGTGTCATTACTAA 60.108 40.000 12.23 0.00 39.99 2.24
176 177 4.382457 GCAACGTTACGTGTGTCATTACTA 59.618 41.667 12.23 0.00 39.99 1.82
177 178 3.182972 GCAACGTTACGTGTGTCATTACT 59.817 43.478 12.23 0.00 39.99 2.24
178 179 3.463127 GCAACGTTACGTGTGTCATTAC 58.537 45.455 12.23 0.00 39.99 1.89
179 180 2.475864 GGCAACGTTACGTGTGTCATTA 59.524 45.455 12.23 0.00 39.99 1.90
180 181 1.262151 GGCAACGTTACGTGTGTCATT 59.738 47.619 12.23 0.00 39.99 2.57
181 182 0.863144 GGCAACGTTACGTGTGTCAT 59.137 50.000 12.23 0.00 39.99 3.06
182 183 2.299562 GGCAACGTTACGTGTGTCA 58.700 52.632 12.23 0.00 39.99 3.58
195 196 2.356135 TGGAGCTTTAAGATCGGCAAC 58.644 47.619 4.08 0.00 29.85 4.17
196 197 2.779755 TGGAGCTTTAAGATCGGCAA 57.220 45.000 4.08 0.00 29.85 4.52
197 198 2.170397 TCATGGAGCTTTAAGATCGGCA 59.830 45.455 4.08 0.00 29.85 5.69
198 199 2.545946 GTCATGGAGCTTTAAGATCGGC 59.454 50.000 4.08 0.00 29.85 5.54
199 200 4.054671 GAGTCATGGAGCTTTAAGATCGG 58.945 47.826 4.08 0.00 29.85 4.18
200 201 3.733224 CGAGTCATGGAGCTTTAAGATCG 59.267 47.826 4.08 0.00 29.85 3.69
201 202 4.054671 CCGAGTCATGGAGCTTTAAGATC 58.945 47.826 1.07 1.07 0.00 2.75
202 203 3.181461 CCCGAGTCATGGAGCTTTAAGAT 60.181 47.826 0.00 0.00 0.00 2.40
203 204 2.168521 CCCGAGTCATGGAGCTTTAAGA 59.831 50.000 0.00 0.00 0.00 2.10
204 205 2.555199 CCCGAGTCATGGAGCTTTAAG 58.445 52.381 0.00 0.00 0.00 1.85
205 206 1.406887 GCCCGAGTCATGGAGCTTTAA 60.407 52.381 0.00 0.00 0.00 1.52
206 207 0.178068 GCCCGAGTCATGGAGCTTTA 59.822 55.000 0.00 0.00 0.00 1.85
207 208 1.078143 GCCCGAGTCATGGAGCTTT 60.078 57.895 0.00 0.00 0.00 3.51
208 209 1.630126 ATGCCCGAGTCATGGAGCTT 61.630 55.000 0.00 0.00 0.00 3.74
209 210 1.630126 AATGCCCGAGTCATGGAGCT 61.630 55.000 0.00 0.00 0.00 4.09
210 211 1.153086 AATGCCCGAGTCATGGAGC 60.153 57.895 0.00 0.00 0.00 4.70
211 212 0.178767 TGAATGCCCGAGTCATGGAG 59.821 55.000 0.00 0.00 0.00 3.86
212 213 0.178767 CTGAATGCCCGAGTCATGGA 59.821 55.000 0.00 0.00 0.00 3.41
213 214 0.107508 ACTGAATGCCCGAGTCATGG 60.108 55.000 0.00 0.00 0.00 3.66
214 215 2.602257 TACTGAATGCCCGAGTCATG 57.398 50.000 0.00 0.00 0.00 3.07
215 216 2.435805 ACATACTGAATGCCCGAGTCAT 59.564 45.455 0.00 0.00 39.39 3.06
216 217 1.831106 ACATACTGAATGCCCGAGTCA 59.169 47.619 0.00 0.00 39.39 3.41
217 218 2.205074 CACATACTGAATGCCCGAGTC 58.795 52.381 0.00 0.00 39.39 3.36
218 219 1.555075 ACACATACTGAATGCCCGAGT 59.445 47.619 0.00 0.00 39.39 4.18
219 220 2.159043 AGACACATACTGAATGCCCGAG 60.159 50.000 0.00 0.00 39.39 4.63
220 221 1.831106 AGACACATACTGAATGCCCGA 59.169 47.619 0.00 0.00 39.39 5.14
221 222 2.315925 AGACACATACTGAATGCCCG 57.684 50.000 0.00 0.00 39.39 6.13
222 223 4.960938 TCATAGACACATACTGAATGCCC 58.039 43.478 0.00 0.00 39.39 5.36
223 224 6.072838 CCATTCATAGACACATACTGAATGCC 60.073 42.308 14.87 0.00 45.96 4.40
224 225 6.072838 CCCATTCATAGACACATACTGAATGC 60.073 42.308 14.87 0.00 45.96 3.56
225 226 6.072838 GCCCATTCATAGACACATACTGAATG 60.073 42.308 13.82 13.82 46.46 2.67
226 227 6.000219 GCCCATTCATAGACACATACTGAAT 59.000 40.000 0.00 0.00 37.10 2.57
227 228 5.368145 GCCCATTCATAGACACATACTGAA 58.632 41.667 0.00 0.00 0.00 3.02
228 229 4.501400 CGCCCATTCATAGACACATACTGA 60.501 45.833 0.00 0.00 0.00 3.41
229 230 3.742882 CGCCCATTCATAGACACATACTG 59.257 47.826 0.00 0.00 0.00 2.74
230 231 3.388024 ACGCCCATTCATAGACACATACT 59.612 43.478 0.00 0.00 0.00 2.12
231 232 3.728845 ACGCCCATTCATAGACACATAC 58.271 45.455 0.00 0.00 0.00 2.39
232 233 4.342665 TGTACGCCCATTCATAGACACATA 59.657 41.667 0.00 0.00 0.00 2.29
233 234 3.133901 TGTACGCCCATTCATAGACACAT 59.866 43.478 0.00 0.00 0.00 3.21
234 235 2.498078 TGTACGCCCATTCATAGACACA 59.502 45.455 0.00 0.00 0.00 3.72
235 236 3.173668 TGTACGCCCATTCATAGACAC 57.826 47.619 0.00 0.00 0.00 3.67
236 237 3.897141 TTGTACGCCCATTCATAGACA 57.103 42.857 0.00 0.00 0.00 3.41
237 238 3.058914 GCATTGTACGCCCATTCATAGAC 60.059 47.826 0.00 0.00 0.00 2.59
238 239 3.138304 GCATTGTACGCCCATTCATAGA 58.862 45.455 0.00 0.00 0.00 1.98
239 240 2.877786 TGCATTGTACGCCCATTCATAG 59.122 45.455 0.00 0.00 0.00 2.23
240 241 2.616376 GTGCATTGTACGCCCATTCATA 59.384 45.455 0.00 0.00 0.00 2.15
241 242 1.405105 GTGCATTGTACGCCCATTCAT 59.595 47.619 0.00 0.00 0.00 2.57
242 243 0.808125 GTGCATTGTACGCCCATTCA 59.192 50.000 0.00 0.00 0.00 2.57
243 244 0.808125 TGTGCATTGTACGCCCATTC 59.192 50.000 0.00 0.00 0.00 2.67
244 245 0.525761 GTGTGCATTGTACGCCCATT 59.474 50.000 7.14 0.00 0.00 3.16
245 246 0.607762 TGTGTGCATTGTACGCCCAT 60.608 50.000 14.56 0.00 0.00 4.00
246 247 0.607762 ATGTGTGCATTGTACGCCCA 60.608 50.000 14.56 5.35 29.54 5.36
247 248 0.525761 AATGTGTGCATTGTACGCCC 59.474 50.000 14.56 0.15 43.12 6.13
248 249 3.312421 AGATAATGTGTGCATTGTACGCC 59.688 43.478 14.56 2.39 44.32 5.68
249 250 4.536364 AGATAATGTGTGCATTGTACGC 57.464 40.909 10.99 10.99 44.32 4.42
250 251 8.888332 TTTTAAGATAATGTGTGCATTGTACG 57.112 30.769 0.00 0.00 44.32 3.67
253 254 9.410556 GACTTTTTAAGATAATGTGTGCATTGT 57.589 29.630 0.00 0.00 44.32 2.71
254 255 9.409312 TGACTTTTTAAGATAATGTGTGCATTG 57.591 29.630 0.00 0.00 44.32 2.82
255 256 9.979578 TTGACTTTTTAAGATAATGTGTGCATT 57.020 25.926 0.00 0.00 46.14 3.56
256 257 9.979578 TTTGACTTTTTAAGATAATGTGTGCAT 57.020 25.926 0.00 0.00 36.80 3.96
257 258 9.979578 ATTTGACTTTTTAAGATAATGTGTGCA 57.020 25.926 0.00 0.00 0.00 4.57
289 290 9.596677 CATTTTCAAACAATCAAATGCGTTAAT 57.403 25.926 0.00 0.00 31.67 1.40
290 291 7.585573 GCATTTTCAAACAATCAAATGCGTTAA 59.414 29.630 11.49 0.00 46.83 2.01
291 292 7.068341 GCATTTTCAAACAATCAAATGCGTTA 58.932 30.769 11.49 0.00 46.83 3.18
292 293 5.908499 GCATTTTCAAACAATCAAATGCGTT 59.092 32.000 11.49 0.00 46.83 4.84
293 294 5.442402 GCATTTTCAAACAATCAAATGCGT 58.558 33.333 11.49 0.00 46.83 5.24
294 295 5.961393 GCATTTTCAAACAATCAAATGCG 57.039 34.783 11.49 0.00 46.83 4.73
297 298 9.804758 ACAAATTGCATTTTCAAACAATCAAAT 57.195 22.222 3.63 0.00 31.75 2.32
298 299 9.635520 AACAAATTGCATTTTCAAACAATCAAA 57.364 22.222 3.63 0.00 31.75 2.69
299 300 9.073368 CAACAAATTGCATTTTCAAACAATCAA 57.927 25.926 3.63 0.00 31.75 2.57
300 301 8.616377 CAACAAATTGCATTTTCAAACAATCA 57.384 26.923 3.63 0.00 31.75 2.57
322 323 2.253603 GCGAGTGAAATTGATGGCAAC 58.746 47.619 0.00 0.00 36.72 4.17
323 324 1.135717 CGCGAGTGAAATTGATGGCAA 60.136 47.619 0.00 0.00 38.60 4.52
324 325 0.447406 CGCGAGTGAAATTGATGGCA 59.553 50.000 0.00 0.00 0.00 4.92
325 326 0.248215 CCGCGAGTGAAATTGATGGC 60.248 55.000 8.23 0.00 0.00 4.40
326 327 0.378257 CCCGCGAGTGAAATTGATGG 59.622 55.000 8.23 0.00 0.00 3.51
327 328 1.328680 CTCCCGCGAGTGAAATTGATG 59.671 52.381 8.23 0.00 0.00 3.07
328 329 1.207089 TCTCCCGCGAGTGAAATTGAT 59.793 47.619 8.23 0.00 37.40 2.57
329 330 0.606096 TCTCCCGCGAGTGAAATTGA 59.394 50.000 8.23 0.00 37.40 2.57
330 331 1.394917 CTTCTCCCGCGAGTGAAATTG 59.605 52.381 8.23 0.00 37.40 2.32
331 332 1.275291 TCTTCTCCCGCGAGTGAAATT 59.725 47.619 8.23 0.00 37.40 1.82
332 333 0.895530 TCTTCTCCCGCGAGTGAAAT 59.104 50.000 8.23 0.00 37.40 2.17
333 334 0.895530 ATCTTCTCCCGCGAGTGAAA 59.104 50.000 8.23 0.00 37.40 2.69
334 335 0.173481 CATCTTCTCCCGCGAGTGAA 59.827 55.000 8.23 6.27 37.40 3.18
335 336 1.667154 CCATCTTCTCCCGCGAGTGA 61.667 60.000 8.23 0.00 37.40 3.41
336 337 1.227089 CCATCTTCTCCCGCGAGTG 60.227 63.158 8.23 0.00 37.40 3.51
337 338 3.082579 GCCATCTTCTCCCGCGAGT 62.083 63.158 8.23 0.00 37.40 4.18
338 339 2.279784 GCCATCTTCTCCCGCGAG 60.280 66.667 8.23 0.00 37.48 5.03
339 340 4.207281 CGCCATCTTCTCCCGCGA 62.207 66.667 8.23 0.00 45.41 5.87
341 342 4.918201 CCCGCCATCTTCTCCCGC 62.918 72.222 0.00 0.00 0.00 6.13
342 343 3.154473 TCCCGCCATCTTCTCCCG 61.154 66.667 0.00 0.00 0.00 5.14
343 344 2.506472 GTCCCGCCATCTTCTCCC 59.494 66.667 0.00 0.00 0.00 4.30
344 345 2.107141 CGTCCCGCCATCTTCTCC 59.893 66.667 0.00 0.00 0.00 3.71
361 362 3.859414 ATCTCCGCCTCTGCCTGC 61.859 66.667 0.00 0.00 0.00 4.85
362 363 2.108566 CATCTCCGCCTCTGCCTG 59.891 66.667 0.00 0.00 0.00 4.85
363 364 3.160047 CCATCTCCGCCTCTGCCT 61.160 66.667 0.00 0.00 0.00 4.75
364 365 4.247380 CCCATCTCCGCCTCTGCC 62.247 72.222 0.00 0.00 0.00 4.85
365 366 4.247380 CCCCATCTCCGCCTCTGC 62.247 72.222 0.00 0.00 0.00 4.26
366 367 3.554342 CCCCCATCTCCGCCTCTG 61.554 72.222 0.00 0.00 0.00 3.35
372 373 4.856801 CCGTTGCCCCCATCTCCG 62.857 72.222 0.00 0.00 0.00 4.63
373 374 3.728373 ACCGTTGCCCCCATCTCC 61.728 66.667 0.00 0.00 0.00 3.71
374 375 2.438434 CACCGTTGCCCCCATCTC 60.438 66.667 0.00 0.00 0.00 2.75
375 376 4.047125 CCACCGTTGCCCCCATCT 62.047 66.667 0.00 0.00 0.00 2.90
376 377 4.360405 ACCACCGTTGCCCCCATC 62.360 66.667 0.00 0.00 0.00 3.51
377 378 4.676951 CACCACCGTTGCCCCCAT 62.677 66.667 0.00 0.00 0.00 4.00
382 383 4.279043 GTTGCCACCACCGTTGCC 62.279 66.667 0.00 0.00 29.54 4.52
383 384 4.622456 CGTTGCCACCACCGTTGC 62.622 66.667 0.00 0.00 0.00 4.17
384 385 2.897846 TCGTTGCCACCACCGTTG 60.898 61.111 0.00 0.00 0.00 4.10
385 386 2.898343 GTCGTTGCCACCACCGTT 60.898 61.111 0.00 0.00 0.00 4.44
388 389 3.343421 GACGTCGTTGCCACCACC 61.343 66.667 0.00 0.00 0.00 4.61
389 390 3.343421 GGACGTCGTTGCCACCAC 61.343 66.667 9.92 0.00 0.00 4.16
390 391 4.612412 GGGACGTCGTTGCCACCA 62.612 66.667 9.92 0.00 0.00 4.17
391 392 4.612412 TGGGACGTCGTTGCCACC 62.612 66.667 9.92 3.56 30.79 4.61
392 393 2.589442 TTGGGACGTCGTTGCCAC 60.589 61.111 9.92 0.00 36.58 5.01
393 394 2.589442 GTTGGGACGTCGTTGCCA 60.589 61.111 9.92 8.36 34.68 4.92
394 395 1.512156 ATTGTTGGGACGTCGTTGCC 61.512 55.000 9.92 5.51 0.00 4.52
395 396 0.385473 CATTGTTGGGACGTCGTTGC 60.385 55.000 9.92 0.73 0.00 4.17
396 397 0.385473 GCATTGTTGGGACGTCGTTG 60.385 55.000 9.92 0.59 0.00 4.10
397 398 1.512156 GGCATTGTTGGGACGTCGTT 61.512 55.000 9.92 0.00 0.00 3.85
398 399 1.964373 GGCATTGTTGGGACGTCGT 60.964 57.895 9.92 0.00 0.00 4.34
399 400 2.867472 GGCATTGTTGGGACGTCG 59.133 61.111 9.92 0.00 0.00 5.12
400 401 1.635663 CTCGGCATTGTTGGGACGTC 61.636 60.000 7.13 7.13 0.00 4.34
401 402 1.671054 CTCGGCATTGTTGGGACGT 60.671 57.895 0.00 0.00 0.00 4.34
402 403 3.039202 GCTCGGCATTGTTGGGACG 62.039 63.158 0.00 0.00 0.00 4.79
403 404 2.700773 GGCTCGGCATTGTTGGGAC 61.701 63.158 0.00 0.00 0.00 4.46
404 405 2.361104 GGCTCGGCATTGTTGGGA 60.361 61.111 0.00 0.00 0.00 4.37
405 406 3.814268 CGGCTCGGCATTGTTGGG 61.814 66.667 0.00 0.00 0.00 4.12
406 407 3.814268 CCGGCTCGGCATTGTTGG 61.814 66.667 0.56 0.00 41.17 3.77
407 408 3.814268 CCCGGCTCGGCATTGTTG 61.814 66.667 7.99 0.00 46.86 3.33
408 409 3.976701 CTCCCGGCTCGGCATTGTT 62.977 63.158 7.99 0.00 46.86 2.83
409 410 4.473520 CTCCCGGCTCGGCATTGT 62.474 66.667 7.99 0.00 46.86 2.71
421 422 3.382832 AACTCCAGGTCGCTCCCG 61.383 66.667 0.00 0.00 36.75 5.14
422 423 2.266055 CAACTCCAGGTCGCTCCC 59.734 66.667 0.00 0.00 36.75 4.30
423 424 2.266055 CCAACTCCAGGTCGCTCC 59.734 66.667 0.00 0.00 0.00 4.70
424 425 2.435059 GCCAACTCCAGGTCGCTC 60.435 66.667 0.00 0.00 0.00 5.03
425 426 2.527951 GATGCCAACTCCAGGTCGCT 62.528 60.000 0.00 0.00 0.00 4.93
426 427 2.045926 ATGCCAACTCCAGGTCGC 60.046 61.111 0.00 0.00 0.00 5.19
427 428 0.321564 TTGATGCCAACTCCAGGTCG 60.322 55.000 0.00 0.00 0.00 4.79
428 429 1.747355 CATTGATGCCAACTCCAGGTC 59.253 52.381 0.00 0.00 34.72 3.85
429 430 1.076024 ACATTGATGCCAACTCCAGGT 59.924 47.619 0.00 0.00 34.72 4.00
430 431 1.475280 CACATTGATGCCAACTCCAGG 59.525 52.381 0.00 0.00 34.72 4.45
431 432 1.475280 CCACATTGATGCCAACTCCAG 59.525 52.381 0.00 0.00 34.72 3.86
432 433 1.075212 TCCACATTGATGCCAACTCCA 59.925 47.619 0.00 0.00 34.72 3.86
433 434 1.838112 TCCACATTGATGCCAACTCC 58.162 50.000 0.00 0.00 34.72 3.85
434 435 2.100252 CCATCCACATTGATGCCAACTC 59.900 50.000 0.00 0.00 40.66 3.01
435 436 2.104967 CCATCCACATTGATGCCAACT 58.895 47.619 0.00 0.00 40.66 3.16
436 437 1.472026 GCCATCCACATTGATGCCAAC 60.472 52.381 0.00 0.00 40.66 3.77
437 438 0.825410 GCCATCCACATTGATGCCAA 59.175 50.000 0.00 0.00 40.66 4.52
438 439 0.324460 TGCCATCCACATTGATGCCA 60.324 50.000 0.00 0.00 40.66 4.92
439 440 0.825410 TTGCCATCCACATTGATGCC 59.175 50.000 0.00 0.00 40.66 4.40
440 441 1.205179 TGTTGCCATCCACATTGATGC 59.795 47.619 0.00 0.00 40.66 3.91
441 442 3.255725 GTTGTTGCCATCCACATTGATG 58.744 45.455 0.00 0.00 41.47 3.07
442 443 2.898612 TGTTGTTGCCATCCACATTGAT 59.101 40.909 0.00 0.00 0.00 2.57
443 444 2.314246 TGTTGTTGCCATCCACATTGA 58.686 42.857 0.00 0.00 0.00 2.57
444 445 2.816204 TGTTGTTGCCATCCACATTG 57.184 45.000 0.00 0.00 0.00 2.82
445 446 2.094597 CGATGTTGTTGCCATCCACATT 60.095 45.455 0.00 0.00 36.23 2.71
446 447 1.473677 CGATGTTGTTGCCATCCACAT 59.526 47.619 0.00 0.00 36.23 3.21
447 448 0.880441 CGATGTTGTTGCCATCCACA 59.120 50.000 0.00 0.00 36.23 4.17
448 449 0.881118 ACGATGTTGTTGCCATCCAC 59.119 50.000 0.00 0.00 36.23 4.02
449 450 1.269174 CAACGATGTTGTTGCCATCCA 59.731 47.619 1.59 0.00 42.34 3.41
450 451 1.402720 CCAACGATGTTGTTGCCATCC 60.403 52.381 8.68 0.00 46.14 3.51
451 452 1.269448 ACCAACGATGTTGTTGCCATC 59.731 47.619 8.68 0.00 46.14 3.51
452 453 1.327303 ACCAACGATGTTGTTGCCAT 58.673 45.000 8.68 0.00 46.14 4.40
453 454 1.876799 CTACCAACGATGTTGTTGCCA 59.123 47.619 8.68 0.00 46.14 4.92
454 455 2.147958 TCTACCAACGATGTTGTTGCC 58.852 47.619 8.68 0.00 46.14 4.52
455 456 2.159627 CCTCTACCAACGATGTTGTTGC 59.840 50.000 8.68 0.00 46.14 4.17
456 457 2.742053 CCCTCTACCAACGATGTTGTTG 59.258 50.000 8.68 6.21 46.86 3.33
457 458 2.290071 CCCCTCTACCAACGATGTTGTT 60.290 50.000 8.68 0.00 0.00 2.83
458 459 1.278127 CCCCTCTACCAACGATGTTGT 59.722 52.381 8.68 0.75 0.00 3.32
459 460 1.553248 TCCCCTCTACCAACGATGTTG 59.447 52.381 2.74 2.74 0.00 3.33
460 461 1.831736 CTCCCCTCTACCAACGATGTT 59.168 52.381 0.00 0.00 0.00 2.71
461 462 1.273098 ACTCCCCTCTACCAACGATGT 60.273 52.381 0.00 0.00 0.00 3.06
462 463 1.409427 GACTCCCCTCTACCAACGATG 59.591 57.143 0.00 0.00 0.00 3.84
463 464 1.006758 TGACTCCCCTCTACCAACGAT 59.993 52.381 0.00 0.00 0.00 3.73
464 465 0.406750 TGACTCCCCTCTACCAACGA 59.593 55.000 0.00 0.00 0.00 3.85
465 466 0.818296 CTGACTCCCCTCTACCAACG 59.182 60.000 0.00 0.00 0.00 4.10
466 467 2.104170 CTCTGACTCCCCTCTACCAAC 58.896 57.143 0.00 0.00 0.00 3.77
467 468 1.007238 CCTCTGACTCCCCTCTACCAA 59.993 57.143 0.00 0.00 0.00 3.67
468 469 0.631753 CCTCTGACTCCCCTCTACCA 59.368 60.000 0.00 0.00 0.00 3.25
469 470 0.632294 ACCTCTGACTCCCCTCTACC 59.368 60.000 0.00 0.00 0.00 3.18
470 471 2.104170 CAACCTCTGACTCCCCTCTAC 58.896 57.143 0.00 0.00 0.00 2.59
471 472 2.000803 TCAACCTCTGACTCCCCTCTA 58.999 52.381 0.00 0.00 0.00 2.43
472 473 0.787084 TCAACCTCTGACTCCCCTCT 59.213 55.000 0.00 0.00 0.00 3.69
473 474 1.872773 ATCAACCTCTGACTCCCCTC 58.127 55.000 0.00 0.00 36.69 4.30
474 475 2.359781 CCTATCAACCTCTGACTCCCCT 60.360 54.545 0.00 0.00 36.69 4.79
475 476 2.043227 CCTATCAACCTCTGACTCCCC 58.957 57.143 0.00 0.00 36.69 4.81
476 477 2.432510 CACCTATCAACCTCTGACTCCC 59.567 54.545 0.00 0.00 36.69 4.30
477 478 2.432510 CCACCTATCAACCTCTGACTCC 59.567 54.545 0.00 0.00 36.69 3.85
478 479 2.159028 GCCACCTATCAACCTCTGACTC 60.159 54.545 0.00 0.00 36.69 3.36
479 480 1.834263 GCCACCTATCAACCTCTGACT 59.166 52.381 0.00 0.00 36.69 3.41
480 481 1.555075 TGCCACCTATCAACCTCTGAC 59.445 52.381 0.00 0.00 36.69 3.51
481 482 1.951209 TGCCACCTATCAACCTCTGA 58.049 50.000 0.00 0.00 38.81 3.27
482 483 2.092753 ACATGCCACCTATCAACCTCTG 60.093 50.000 0.00 0.00 0.00 3.35
483 484 2.092753 CACATGCCACCTATCAACCTCT 60.093 50.000 0.00 0.00 0.00 3.69
484 485 2.292267 CACATGCCACCTATCAACCTC 58.708 52.381 0.00 0.00 0.00 3.85
485 486 1.683011 GCACATGCCACCTATCAACCT 60.683 52.381 0.00 0.00 34.31 3.50
486 487 0.740737 GCACATGCCACCTATCAACC 59.259 55.000 0.00 0.00 34.31 3.77
487 488 0.378257 CGCACATGCCACCTATCAAC 59.622 55.000 0.00 0.00 37.91 3.18
488 489 0.747644 CCGCACATGCCACCTATCAA 60.748 55.000 0.00 0.00 37.91 2.57
489 490 1.153188 CCGCACATGCCACCTATCA 60.153 57.895 0.00 0.00 37.91 2.15
490 491 1.893808 CCCGCACATGCCACCTATC 60.894 63.158 0.00 0.00 37.91 2.08
491 492 2.192979 CCCGCACATGCCACCTAT 59.807 61.111 0.00 0.00 37.91 2.57
492 493 4.108299 CCCCGCACATGCCACCTA 62.108 66.667 0.00 0.00 37.91 3.08
514 515 1.716172 CTTTTTCTCCCGCGCTAGC 59.284 57.895 5.56 4.06 40.74 3.42
515 516 1.706287 GGCTTTTTCTCCCGCGCTAG 61.706 60.000 5.56 0.00 0.00 3.42
516 517 1.743995 GGCTTTTTCTCCCGCGCTA 60.744 57.895 5.56 0.00 0.00 4.26
517 518 3.056328 GGCTTTTTCTCCCGCGCT 61.056 61.111 5.56 0.00 0.00 5.92
518 519 3.361977 TGGCTTTTTCTCCCGCGC 61.362 61.111 0.00 0.00 0.00 6.86
519 520 2.258013 TGTGGCTTTTTCTCCCGCG 61.258 57.895 0.00 0.00 31.90 6.46
520 521 1.172812 AGTGTGGCTTTTTCTCCCGC 61.173 55.000 0.00 0.00 0.00 6.13
521 522 1.318576 AAGTGTGGCTTTTTCTCCCG 58.681 50.000 0.00 0.00 32.57 5.14
522 523 3.751518 TCTAAGTGTGGCTTTTTCTCCC 58.248 45.455 0.00 0.00 38.57 4.30
523 524 4.214332 CACTCTAAGTGTGGCTTTTTCTCC 59.786 45.833 1.27 0.00 41.19 3.71
524 525 5.057149 TCACTCTAAGTGTGGCTTTTTCTC 58.943 41.667 8.56 0.00 46.03 2.87
525 526 5.036117 TCACTCTAAGTGTGGCTTTTTCT 57.964 39.130 8.56 0.00 46.03 2.52
526 527 5.335191 CCATCACTCTAAGTGTGGCTTTTTC 60.335 44.000 8.56 0.00 46.03 2.29
527 528 4.520492 CCATCACTCTAAGTGTGGCTTTTT 59.480 41.667 8.56 0.00 46.03 1.94
528 529 4.074970 CCATCACTCTAAGTGTGGCTTTT 58.925 43.478 8.56 0.00 46.03 2.27
529 530 3.679389 CCATCACTCTAAGTGTGGCTTT 58.321 45.455 8.56 0.00 46.03 3.51
530 531 3.340814 CCATCACTCTAAGTGTGGCTT 57.659 47.619 8.56 0.00 46.03 4.35
533 534 3.735208 CGTAGCCATCACTCTAAGTGTGG 60.735 52.174 17.21 17.21 46.03 4.17
534 535 3.439293 CGTAGCCATCACTCTAAGTGTG 58.561 50.000 6.96 5.76 46.03 3.82
535 536 2.427453 CCGTAGCCATCACTCTAAGTGT 59.573 50.000 6.96 0.00 46.03 3.55
537 538 2.032620 CCCGTAGCCATCACTCTAAGT 58.967 52.381 0.00 0.00 0.00 2.24
538 539 2.032620 ACCCGTAGCCATCACTCTAAG 58.967 52.381 0.00 0.00 0.00 2.18
539 540 1.754803 CACCCGTAGCCATCACTCTAA 59.245 52.381 0.00 0.00 0.00 2.10
540 541 1.399714 CACCCGTAGCCATCACTCTA 58.600 55.000 0.00 0.00 0.00 2.43
541 542 1.330655 CCACCCGTAGCCATCACTCT 61.331 60.000 0.00 0.00 0.00 3.24
542 543 1.144057 CCACCCGTAGCCATCACTC 59.856 63.158 0.00 0.00 0.00 3.51
543 544 3.031417 GCCACCCGTAGCCATCACT 62.031 63.158 0.00 0.00 0.00 3.41
544 545 2.513897 GCCACCCGTAGCCATCAC 60.514 66.667 0.00 0.00 0.00 3.06
545 546 4.155733 CGCCACCCGTAGCCATCA 62.156 66.667 0.00 0.00 0.00 3.07
546 547 4.910585 CCGCCACCCGTAGCCATC 62.911 72.222 0.00 0.00 34.38 3.51
551 552 3.428282 GTTTGCCGCCACCCGTAG 61.428 66.667 0.00 0.00 34.38 3.51
562 563 2.983592 CACCTCCACCGGTTTGCC 60.984 66.667 2.97 0.00 34.29 4.52
563 564 2.400269 TACCACCTCCACCGGTTTGC 62.400 60.000 2.97 0.00 34.29 3.68
564 565 0.321298 CTACCACCTCCACCGGTTTG 60.321 60.000 2.97 0.00 34.29 2.93
565 566 2.063774 CTACCACCTCCACCGGTTT 58.936 57.895 2.97 0.00 34.29 3.27
566 567 2.590114 GCTACCACCTCCACCGGTT 61.590 63.158 2.97 0.00 34.29 4.44
567 568 3.001406 GCTACCACCTCCACCGGT 61.001 66.667 0.00 0.00 37.93 5.28
568 569 2.291043 AAGCTACCACCTCCACCGG 61.291 63.158 0.00 0.00 0.00 5.28
569 570 1.079127 CAAGCTACCACCTCCACCG 60.079 63.158 0.00 0.00 0.00 4.94
570 571 1.198759 TCCAAGCTACCACCTCCACC 61.199 60.000 0.00 0.00 0.00 4.61
571 572 0.250513 CTCCAAGCTACCACCTCCAC 59.749 60.000 0.00 0.00 0.00 4.02
572 573 0.116342 TCTCCAAGCTACCACCTCCA 59.884 55.000 0.00 0.00 0.00 3.86
573 574 0.827368 CTCTCCAAGCTACCACCTCC 59.173 60.000 0.00 0.00 0.00 4.30
574 575 0.827368 CCTCTCCAAGCTACCACCTC 59.173 60.000 0.00 0.00 0.00 3.85
575 576 0.618968 CCCTCTCCAAGCTACCACCT 60.619 60.000 0.00 0.00 0.00 4.00
576 577 1.908483 CCCTCTCCAAGCTACCACC 59.092 63.158 0.00 0.00 0.00 4.61
577 578 1.222113 GCCCTCTCCAAGCTACCAC 59.778 63.158 0.00 0.00 0.00 4.16
578 579 2.359169 CGCCCTCTCCAAGCTACCA 61.359 63.158 0.00 0.00 0.00 3.25
579 580 2.501610 CGCCCTCTCCAAGCTACC 59.498 66.667 0.00 0.00 0.00 3.18
580 581 2.501610 CCGCCCTCTCCAAGCTAC 59.498 66.667 0.00 0.00 0.00 3.58
581 582 2.764128 CCCGCCCTCTCCAAGCTA 60.764 66.667 0.00 0.00 0.00 3.32
620 621 2.851824 CGAAATTAGTCGGGCAATTTGC 59.148 45.455 13.04 13.04 35.14 3.68
621 622 4.349663 TCGAAATTAGTCGGGCAATTTG 57.650 40.909 7.23 0.00 41.43 2.32
622 623 4.142469 CCTTCGAAATTAGTCGGGCAATTT 60.142 41.667 0.00 3.54 41.43 1.82
623 624 3.377172 CCTTCGAAATTAGTCGGGCAATT 59.623 43.478 0.00 0.00 41.43 2.32
624 625 2.943033 CCTTCGAAATTAGTCGGGCAAT 59.057 45.455 0.00 0.00 41.43 3.56
625 626 2.027929 TCCTTCGAAATTAGTCGGGCAA 60.028 45.455 0.00 0.00 41.43 4.52
626 627 1.551430 TCCTTCGAAATTAGTCGGGCA 59.449 47.619 0.00 0.00 41.43 5.36
627 628 1.931841 GTCCTTCGAAATTAGTCGGGC 59.068 52.381 0.00 0.00 41.43 6.13
628 629 2.190981 CGTCCTTCGAAATTAGTCGGG 58.809 52.381 0.00 0.00 41.43 5.14
629 630 2.190981 CCGTCCTTCGAAATTAGTCGG 58.809 52.381 0.00 4.13 41.43 4.79
630 631 1.587034 GCCGTCCTTCGAAATTAGTCG 59.413 52.381 0.00 0.00 42.86 4.18
631 632 1.587034 CGCCGTCCTTCGAAATTAGTC 59.413 52.381 0.00 0.00 42.86 2.59
632 633 1.636988 CGCCGTCCTTCGAAATTAGT 58.363 50.000 0.00 0.00 42.86 2.24
633 634 0.928229 CCGCCGTCCTTCGAAATTAG 59.072 55.000 0.00 0.00 42.86 1.73
634 635 0.460635 CCCGCCGTCCTTCGAAATTA 60.461 55.000 0.00 0.00 42.86 1.40
635 636 1.743995 CCCGCCGTCCTTCGAAATT 60.744 57.895 0.00 0.00 42.86 1.82
636 637 2.125269 CCCGCCGTCCTTCGAAAT 60.125 61.111 0.00 0.00 42.86 2.17
637 638 2.775032 CTTCCCGCCGTCCTTCGAAA 62.775 60.000 0.00 0.00 42.86 3.46
638 639 3.291101 CTTCCCGCCGTCCTTCGAA 62.291 63.158 0.00 0.00 42.86 3.71
639 640 3.755628 CTTCCCGCCGTCCTTCGA 61.756 66.667 0.00 0.00 42.86 3.71
640 641 4.814294 CCTTCCCGCCGTCCTTCG 62.814 72.222 0.00 0.00 39.52 3.79
649 650 2.043953 AATTCCTGGCCTTCCCGC 60.044 61.111 3.32 0.00 35.87 6.13
650 651 0.106519 ATCAATTCCTGGCCTTCCCG 60.107 55.000 3.32 0.00 35.87 5.14
651 652 1.063717 TCATCAATTCCTGGCCTTCCC 60.064 52.381 3.32 0.00 0.00 3.97
652 653 2.027385 GTCATCAATTCCTGGCCTTCC 58.973 52.381 3.32 0.00 0.00 3.46
653 654 1.672881 CGTCATCAATTCCTGGCCTTC 59.327 52.381 3.32 0.00 0.00 3.46
654 655 1.683011 CCGTCATCAATTCCTGGCCTT 60.683 52.381 3.32 0.00 0.00 4.35
655 656 0.107017 CCGTCATCAATTCCTGGCCT 60.107 55.000 3.32 0.00 0.00 5.19
656 657 0.394352 ACCGTCATCAATTCCTGGCC 60.394 55.000 0.00 0.00 0.00 5.36
657 658 2.213499 CTACCGTCATCAATTCCTGGC 58.787 52.381 0.00 0.00 0.00 4.85
658 659 2.434336 TCCTACCGTCATCAATTCCTGG 59.566 50.000 0.00 0.00 0.00 4.45
659 660 3.493350 CCTCCTACCGTCATCAATTCCTG 60.493 52.174 0.00 0.00 0.00 3.86
660 661 2.700897 CCTCCTACCGTCATCAATTCCT 59.299 50.000 0.00 0.00 0.00 3.36
661 662 2.698797 TCCTCCTACCGTCATCAATTCC 59.301 50.000 0.00 0.00 0.00 3.01
662 663 4.099573 TCTTCCTCCTACCGTCATCAATTC 59.900 45.833 0.00 0.00 0.00 2.17
663 664 4.030913 TCTTCCTCCTACCGTCATCAATT 58.969 43.478 0.00 0.00 0.00 2.32
664 665 3.643237 TCTTCCTCCTACCGTCATCAAT 58.357 45.455 0.00 0.00 0.00 2.57
665 666 3.095912 TCTTCCTCCTACCGTCATCAA 57.904 47.619 0.00 0.00 0.00 2.57
666 667 2.820728 TCTTCCTCCTACCGTCATCA 57.179 50.000 0.00 0.00 0.00 3.07
667 668 3.025262 ACTTCTTCCTCCTACCGTCATC 58.975 50.000 0.00 0.00 0.00 2.92
668 669 3.103080 ACTTCTTCCTCCTACCGTCAT 57.897 47.619 0.00 0.00 0.00 3.06
669 670 2.599408 ACTTCTTCCTCCTACCGTCA 57.401 50.000 0.00 0.00 0.00 4.35
670 671 3.090790 AGAACTTCTTCCTCCTACCGTC 58.909 50.000 0.00 0.00 0.00 4.79
671 672 2.826725 CAGAACTTCTTCCTCCTACCGT 59.173 50.000 0.00 0.00 0.00 4.83
672 673 3.090037 TCAGAACTTCTTCCTCCTACCG 58.910 50.000 0.00 0.00 0.00 4.02
673 674 3.119424 CGTCAGAACTTCTTCCTCCTACC 60.119 52.174 0.00 0.00 0.00 3.18
674 675 3.757493 TCGTCAGAACTTCTTCCTCCTAC 59.243 47.826 0.00 0.00 0.00 3.18
675 676 4.030314 TCGTCAGAACTTCTTCCTCCTA 57.970 45.455 0.00 0.00 0.00 2.94
676 677 2.877866 TCGTCAGAACTTCTTCCTCCT 58.122 47.619 0.00 0.00 0.00 3.69
677 678 3.662247 TTCGTCAGAACTTCTTCCTCC 57.338 47.619 0.00 0.00 0.00 4.30
678 679 5.524281 AGTTTTTCGTCAGAACTTCTTCCTC 59.476 40.000 0.00 0.00 35.86 3.71
679 680 5.429130 AGTTTTTCGTCAGAACTTCTTCCT 58.571 37.500 0.00 0.00 35.86 3.36
680 681 5.736486 AGTTTTTCGTCAGAACTTCTTCC 57.264 39.130 0.00 0.00 35.86 3.46
681 682 7.907194 AGTTAGTTTTTCGTCAGAACTTCTTC 58.093 34.615 0.00 0.00 35.86 2.87
682 683 7.845066 AGTTAGTTTTTCGTCAGAACTTCTT 57.155 32.000 0.00 0.00 35.86 2.52
683 684 7.676572 GCAAGTTAGTTTTTCGTCAGAACTTCT 60.677 37.037 0.00 0.00 34.35 2.85
684 685 6.411203 GCAAGTTAGTTTTTCGTCAGAACTTC 59.589 38.462 0.00 0.00 34.35 3.01
685 686 6.128117 TGCAAGTTAGTTTTTCGTCAGAACTT 60.128 34.615 0.00 0.00 36.38 2.66
686 687 5.353123 TGCAAGTTAGTTTTTCGTCAGAACT 59.647 36.000 0.00 0.00 35.86 3.01
687 688 5.451342 GTGCAAGTTAGTTTTTCGTCAGAAC 59.549 40.000 0.00 0.00 35.86 3.01
688 689 5.122554 TGTGCAAGTTAGTTTTTCGTCAGAA 59.877 36.000 0.00 0.00 33.98 3.02
689 690 4.632251 TGTGCAAGTTAGTTTTTCGTCAGA 59.368 37.500 0.00 0.00 0.00 3.27
690 691 4.904116 TGTGCAAGTTAGTTTTTCGTCAG 58.096 39.130 0.00 0.00 0.00 3.51
691 692 4.948608 TGTGCAAGTTAGTTTTTCGTCA 57.051 36.364 0.00 0.00 0.00 4.35
692 693 5.507077 TCATGTGCAAGTTAGTTTTTCGTC 58.493 37.500 0.00 0.00 0.00 4.20
693 694 5.493133 TCATGTGCAAGTTAGTTTTTCGT 57.507 34.783 0.00 0.00 0.00 3.85
694 695 6.804534 TTTCATGTGCAAGTTAGTTTTTCG 57.195 33.333 0.00 0.00 0.00 3.46
716 717 8.823220 ACCTATATGTAAGTTGCCTGATTTTT 57.177 30.769 0.00 0.00 0.00 1.94
717 718 8.052748 TGACCTATATGTAAGTTGCCTGATTTT 58.947 33.333 0.00 0.00 0.00 1.82
718 719 7.573710 TGACCTATATGTAAGTTGCCTGATTT 58.426 34.615 0.00 0.00 0.00 2.17
719 720 7.136822 TGACCTATATGTAAGTTGCCTGATT 57.863 36.000 0.00 0.00 0.00 2.57
720 721 6.747414 TGACCTATATGTAAGTTGCCTGAT 57.253 37.500 0.00 0.00 0.00 2.90
721 722 6.553953 TTGACCTATATGTAAGTTGCCTGA 57.446 37.500 0.00 0.00 0.00 3.86
722 723 7.807977 ATTTGACCTATATGTAAGTTGCCTG 57.192 36.000 0.00 0.00 0.00 4.85
786 787 9.990868 ATGTTAACTAATTATTTGACCTTCCCT 57.009 29.630 7.22 0.00 0.00 4.20
806 807 7.502895 TGCACCTTTTTACCACTTCTATGTTAA 59.497 33.333 0.00 0.00 0.00 2.01
836 837 4.934001 CAGTGTGATCAACTGATAACAGCT 59.066 41.667 22.89 7.85 44.36 4.24
845 846 1.520494 AGCTGCAGTGTGATCAACTG 58.480 50.000 22.94 22.94 34.83 3.16
865 866 1.517238 TATGATTAGTGCTGGGCCCA 58.483 50.000 26.67 26.67 0.00 5.36
922 923 4.526262 TGATTGTTTGGATTGGGAAACGAT 59.474 37.500 0.00 0.00 38.39 3.73
1023 1024 2.043852 AGGAGTCGATGCGGGAGT 60.044 61.111 0.00 0.00 0.00 3.85
1031 1032 0.748729 GTGACCGGAGAGGAGTCGAT 60.749 60.000 9.46 0.00 45.00 3.59
1546 1550 4.093261 GCGTAATACAAGGCCGTAAAGAAA 59.907 41.667 0.00 0.00 0.00 2.52
1552 1556 0.455410 ACGCGTAATACAAGGCCGTA 59.545 50.000 11.67 0.00 0.00 4.02
1560 1564 3.159353 AGCATCAGAACGCGTAATACA 57.841 42.857 14.46 0.00 0.00 2.29
1566 1570 0.666274 TCGAAAGCATCAGAACGCGT 60.666 50.000 5.58 5.58 0.00 6.01
1747 1761 1.321474 TCCTGCAAAGCAAAGGACAG 58.679 50.000 0.00 0.00 38.41 3.51
1805 1820 4.142708 ACATTATCGAATTCGCTTTGCACA 60.143 37.500 22.90 3.45 39.60 4.57
1901 1916 3.250521 CCCTCGATCTTAGTACTCCGAAC 59.749 52.174 0.00 0.00 0.00 3.95
1919 1934 1.078356 GAGCTCCGGGAAAACCCTC 60.078 63.158 0.87 0.00 34.99 4.30
1955 1970 4.164796 ACCAGATCAGCAAATGGTATGAGA 59.835 41.667 0.40 0.00 44.15 3.27
2001 2016 2.026822 AGCAACTTCAGACCATGTAGGG 60.027 50.000 0.00 0.00 43.89 3.53
2016 2032 3.092301 GGAGCCTTTTGGATAAGCAACT 58.908 45.455 0.00 0.00 44.07 3.16
2040 2056 5.184479 CCCATTGACACAATGAGAATTGACT 59.816 40.000 21.12 0.00 35.60 3.41
2051 2067 2.537633 AGGATGCCCATTGACACAAT 57.462 45.000 0.00 0.00 33.88 2.71
2185 2248 6.992715 AGGATTCTTTTGAGGTAATATCACCG 59.007 38.462 0.00 0.00 43.84 4.94
2230 2293 6.677076 ACACAGTATCCCTACCTAAAAATCCT 59.323 38.462 0.00 0.00 0.00 3.24
2233 2296 8.159229 AGAACACAGTATCCCTACCTAAAAAT 57.841 34.615 0.00 0.00 0.00 1.82
2274 2337 5.181748 CCTGTTCTCCAGATTTAACCTCTG 58.818 45.833 7.10 7.10 44.49 3.35
2275 2338 4.323868 GCCTGTTCTCCAGATTTAACCTCT 60.324 45.833 0.00 0.00 44.49 3.69
2433 2501 1.066430 TCGGTGAACCCATAGTCAAGC 60.066 52.381 0.00 0.00 0.00 4.01
2649 2717 2.869101 AGAGGGCTTCCAAGAGAAAC 57.131 50.000 0.00 0.00 32.88 2.78
2763 2831 1.675641 GGTGTGGTAGGCAGCAAGG 60.676 63.158 0.00 0.00 33.05 3.61
2772 2840 3.133003 CCTCTTCTATGGTGGTGTGGTAG 59.867 52.174 0.00 0.00 0.00 3.18
3034 3103 0.673437 CGAGATCCTTGAGCCTCCTC 59.327 60.000 0.00 0.00 38.62 3.71
3111 3180 6.426587 AGTCTGGTGTTGCAAAATATAGGAT 58.573 36.000 0.00 0.00 0.00 3.24
3112 3181 5.815581 AGTCTGGTGTTGCAAAATATAGGA 58.184 37.500 0.00 0.00 0.00 2.94
3113 3182 7.624360 TTAGTCTGGTGTTGCAAAATATAGG 57.376 36.000 0.00 0.00 0.00 2.57
3115 3184 9.853555 CAAATTAGTCTGGTGTTGCAAAATATA 57.146 29.630 0.00 0.00 0.00 0.86
3116 3185 8.584157 TCAAATTAGTCTGGTGTTGCAAAATAT 58.416 29.630 0.00 0.00 0.00 1.28
3117 3186 7.946207 TCAAATTAGTCTGGTGTTGCAAAATA 58.054 30.769 0.00 0.00 0.00 1.40
3118 3187 6.815089 TCAAATTAGTCTGGTGTTGCAAAAT 58.185 32.000 0.00 0.00 0.00 1.82
3157 3230 7.669722 ACTTGTTAATAATGTGTGAACCCATCT 59.330 33.333 0.00 0.00 0.00 2.90
3184 3257 5.572896 GGCACAGAAATCAGTTTTTAATCGG 59.427 40.000 0.00 0.00 0.00 4.18
3440 3514 6.044520 TGCACTAGGACTATCACTAGGACTAT 59.955 42.308 0.00 0.00 40.71 2.12
3441 3515 5.368816 TGCACTAGGACTATCACTAGGACTA 59.631 44.000 0.00 0.00 40.71 2.59
3442 3516 4.166337 TGCACTAGGACTATCACTAGGACT 59.834 45.833 0.00 0.00 40.71 3.85
3443 3517 4.462133 TGCACTAGGACTATCACTAGGAC 58.538 47.826 0.00 0.00 40.71 3.85
3444 3518 4.720046 CTGCACTAGGACTATCACTAGGA 58.280 47.826 0.00 0.00 40.71 2.94
3445 3519 3.254657 GCTGCACTAGGACTATCACTAGG 59.745 52.174 0.00 0.00 40.71 3.02
3446 3520 3.885901 TGCTGCACTAGGACTATCACTAG 59.114 47.826 0.00 0.00 41.83 2.57
3447 3521 3.898482 TGCTGCACTAGGACTATCACTA 58.102 45.455 0.00 0.00 0.00 2.74
3448 3522 2.739943 TGCTGCACTAGGACTATCACT 58.260 47.619 0.00 0.00 0.00 3.41
3449 3523 3.181471 ACATGCTGCACTAGGACTATCAC 60.181 47.826 3.57 0.00 0.00 3.06
3450 3524 3.033909 ACATGCTGCACTAGGACTATCA 58.966 45.455 3.57 0.00 0.00 2.15
3451 3525 3.388308 CACATGCTGCACTAGGACTATC 58.612 50.000 3.57 0.00 0.00 2.08
3487 3561 2.948979 CAAGCTCGGAGTAGAGACAGAT 59.051 50.000 6.90 0.00 40.57 2.90
3490 3564 1.464734 CCAAGCTCGGAGTAGAGACA 58.535 55.000 6.90 0.00 40.57 3.41
3507 3581 1.609061 GCTTGTGTTCTGAGCTAGCCA 60.609 52.381 12.13 8.40 33.72 4.75
3572 3772 3.326836 TGACCGATTGACAGTAATGCA 57.673 42.857 0.00 0.00 0.00 3.96
3880 4106 5.182001 ACAATGAAGAACCATTCTGCTACAC 59.818 40.000 0.00 0.00 40.59 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.