Multiple sequence alignment - TraesCS5D01G231800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G231800 chr5D 100.000 4862 0 0 1 4862 339055622 339050761 0.000000e+00 8979.0
1 TraesCS5D01G231800 chr5D 97.917 48 0 1 4637 4684 339050946 339050900 1.120000e-11 82.4
2 TraesCS5D01G231800 chr5D 97.917 48 0 1 4677 4723 339050986 339050939 1.120000e-11 82.4
3 TraesCS5D01G231800 chr5B 90.853 4340 245 71 340 4582 397962540 397958256 0.000000e+00 5675.0
4 TraesCS5D01G231800 chr5B 88.210 229 23 2 85 309 397963075 397962847 2.230000e-68 270.0
5 TraesCS5D01G231800 chr5B 93.860 114 7 0 1 114 397963195 397963082 6.470000e-39 172.0
6 TraesCS5D01G231800 chr5B 96.774 62 2 0 4755 4816 397958008 397957947 2.390000e-18 104.0
7 TraesCS5D01G231800 chrUn 83.516 182 21 9 356 530 74563363 74563184 1.400000e-35 161.0
8 TraesCS5D01G231800 chrUn 95.652 46 2 0 4756 4801 10365051 10365006 1.880000e-09 75.0
9 TraesCS5D01G231800 chrUn 95.652 46 2 0 4756 4801 222288521 222288476 1.880000e-09 75.0
10 TraesCS5D01G231800 chrUn 95.652 46 2 0 4756 4801 239187982 239188027 1.880000e-09 75.0
11 TraesCS5D01G231800 chr2B 82.734 139 19 5 463 600 786215505 786215371 8.550000e-23 119.0
12 TraesCS5D01G231800 chr1B 88.889 63 6 1 4756 4818 37261704 37261643 5.220000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G231800 chr5D 339050761 339055622 4861 True 8979.00 8979 100.00000 1 4862 1 chr5D.!!$R1 4861
1 TraesCS5D01G231800 chr5B 397957947 397963195 5248 True 1555.25 5675 92.42425 1 4816 4 chr5B.!!$R1 4815

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
237 274 0.529773 CGCAACTATCCCGCTTAGCA 60.530 55.0 4.7 0.0 0.00 3.49 F
1053 1378 0.108329 CGCACTTCCCCATCTACGTT 60.108 55.0 0.0 0.0 0.00 3.99 F
1612 1937 0.457851 AGGGCTTCGTTGAGATCGAG 59.542 55.0 0.0 0.0 38.52 4.04 F
2018 2343 1.560505 AATCATGTTCCCCCTGCAAC 58.439 50.0 0.0 0.0 0.00 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1381 1706 0.103026 TCGGCTCATCTTCCACATCG 59.897 55.0 0.0 0.0 0.00 3.84 R
1953 2278 0.179062 GAGCAAGCACCCATCGATCT 60.179 55.0 0.0 0.0 0.00 2.75 R
2691 3027 0.391130 GCAACCTAGATGTGTGCCGA 60.391 55.0 0.0 0.0 0.00 5.54 R
3956 4329 0.246635 CAGTTCGAGGGGACGATTGT 59.753 55.0 0.0 0.0 41.82 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.759489 TTTAGATGCAACAACCTTAGATTGT 57.241 32.000 0.00 0.00 42.07 2.71
37 38 9.673454 CAACCTTAGATTGTTGGTTTAAGTTAC 57.327 33.333 0.00 0.00 40.39 2.50
149 186 3.664107 TGTAATGAGCAGTGAACACTCC 58.336 45.455 4.38 0.00 40.20 3.85
150 187 2.936919 AATGAGCAGTGAACACTCCA 57.063 45.000 4.38 4.50 40.20 3.86
153 190 1.693606 TGAGCAGTGAACACTCCATGA 59.306 47.619 4.38 0.00 40.20 3.07
155 192 1.417517 AGCAGTGAACACTCCATGACA 59.582 47.619 4.38 0.00 40.20 3.58
161 198 4.276678 AGTGAACACTCCATGACAAACATG 59.723 41.667 1.32 0.00 42.89 3.21
230 267 1.734163 AAACTTCCGCAACTATCCCG 58.266 50.000 0.00 0.00 0.00 5.14
237 274 0.529773 CGCAACTATCCCGCTTAGCA 60.530 55.000 4.70 0.00 0.00 3.49
255 296 1.220529 CATATCACTTGCGCGGACAT 58.779 50.000 8.83 0.00 0.00 3.06
257 298 0.809636 TATCACTTGCGCGGACATGG 60.810 55.000 8.83 0.00 0.00 3.66
263 304 2.108157 GCGCGGACATGGGTATCA 59.892 61.111 8.83 0.00 0.00 2.15
272 313 3.433598 GGACATGGGTATCAAGCTTAGCA 60.434 47.826 7.07 0.00 0.00 3.49
273 314 3.545703 ACATGGGTATCAAGCTTAGCAC 58.454 45.455 7.07 0.00 0.00 4.40
278 319 2.158608 GGTATCAAGCTTAGCACCCCAT 60.159 50.000 7.07 0.00 0.00 4.00
279 320 2.834638 ATCAAGCTTAGCACCCCATT 57.165 45.000 7.07 0.00 0.00 3.16
281 322 3.730215 TCAAGCTTAGCACCCCATTTA 57.270 42.857 7.07 0.00 0.00 1.40
284 325 3.449746 AGCTTAGCACCCCATTTACAA 57.550 42.857 7.07 0.00 0.00 2.41
298 339 3.587797 TTTACAACTCGAGGAAGCGAT 57.412 42.857 18.41 0.00 39.85 4.58
313 354 2.352503 GCGATGTGCATTTGTTTCCT 57.647 45.000 0.00 0.00 45.45 3.36
314 355 2.676076 GCGATGTGCATTTGTTTCCTT 58.324 42.857 0.00 0.00 45.45 3.36
315 356 3.832276 GCGATGTGCATTTGTTTCCTTA 58.168 40.909 0.00 0.00 45.45 2.69
316 357 4.233789 GCGATGTGCATTTGTTTCCTTAA 58.766 39.130 0.00 0.00 45.45 1.85
317 358 4.683781 GCGATGTGCATTTGTTTCCTTAAA 59.316 37.500 0.00 0.00 45.45 1.52
319 360 6.529829 GCGATGTGCATTTGTTTCCTTAAATA 59.470 34.615 0.00 0.00 45.45 1.40
320 361 7.462724 GCGATGTGCATTTGTTTCCTTAAATAC 60.463 37.037 0.00 0.00 45.45 1.89
323 364 9.777297 ATGTGCATTTGTTTCCTTAAATACTTT 57.223 25.926 0.00 0.00 0.00 2.66
324 365 9.255304 TGTGCATTTGTTTCCTTAAATACTTTC 57.745 29.630 0.00 0.00 0.00 2.62
325 366 9.255304 GTGCATTTGTTTCCTTAAATACTTTCA 57.745 29.630 0.00 0.00 0.00 2.69
327 368 8.708742 GCATTTGTTTCCTTAAATACTTTCACC 58.291 33.333 0.00 0.00 0.00 4.02
328 369 9.203421 CATTTGTTTCCTTAAATACTTTCACCC 57.797 33.333 0.00 0.00 0.00 4.61
329 370 8.541899 TTTGTTTCCTTAAATACTTTCACCCT 57.458 30.769 0.00 0.00 0.00 4.34
330 371 9.643735 TTTGTTTCCTTAAATACTTTCACCCTA 57.356 29.630 0.00 0.00 0.00 3.53
331 372 8.857694 TGTTTCCTTAAATACTTTCACCCTAG 57.142 34.615 0.00 0.00 0.00 3.02
332 373 8.662255 TGTTTCCTTAAATACTTTCACCCTAGA 58.338 33.333 0.00 0.00 0.00 2.43
333 374 8.944029 GTTTCCTTAAATACTTTCACCCTAGAC 58.056 37.037 0.00 0.00 0.00 2.59
334 375 8.445361 TTCCTTAAATACTTTCACCCTAGACT 57.555 34.615 0.00 0.00 0.00 3.24
345 662 4.517285 TCACCCTAGACTTAACGTACGAT 58.483 43.478 24.41 13.58 0.00 3.73
353 670 9.202273 CCTAGACTTAACGTACGATAATACTCT 57.798 37.037 24.41 19.40 0.00 3.24
357 674 9.152851 GACTTAACGTACGATAATACTCTGTTC 57.847 37.037 24.41 5.00 0.00 3.18
360 677 6.630444 ACGTACGATAATACTCTGTTCCAT 57.370 37.500 24.41 0.00 0.00 3.41
363 680 8.072567 ACGTACGATAATACTCTGTTCCATAAC 58.927 37.037 24.41 0.00 36.07 1.89
373 690 4.188462 TCTGTTCCATAACATAAGGTGCG 58.812 43.478 0.00 0.00 44.43 5.34
382 699 6.472163 CCATAACATAAGGTGCGTCAATTTTC 59.528 38.462 0.00 0.00 0.00 2.29
389 707 8.586273 CATAAGGTGCGTCAATTTTCATAAAAG 58.414 33.333 0.00 0.00 33.22 2.27
395 713 7.787480 GTGCGTCAATTTTCATAAAAGTCAAAC 59.213 33.333 0.00 0.00 33.22 2.93
396 714 7.489435 TGCGTCAATTTTCATAAAAGTCAAACA 59.511 29.630 0.00 0.00 33.22 2.83
397 715 8.487176 GCGTCAATTTTCATAAAAGTCAAACAT 58.513 29.630 0.00 0.00 33.22 2.71
417 735 9.888878 CAAACATATGTATGATTGACCAAGATC 57.111 33.333 9.21 0.00 44.38 2.75
418 736 9.631257 AAACATATGTATGATTGACCAAGATCA 57.369 29.630 9.21 0.00 37.15 2.92
428 746 9.643693 ATGATTGACCAAGATCATAAAACAAAC 57.356 29.630 0.00 0.00 40.29 2.93
492 813 7.642669 ACATTTTGTGATGGATCGAATGATAC 58.357 34.615 0.00 0.00 35.84 2.24
560 881 9.463443 AGTCAAACATGCATAAGTTTAACTTTC 57.537 29.630 15.83 6.58 33.54 2.62
579 900 6.569780 ACTTTCTGAAAAACCATAACACACC 58.430 36.000 4.18 0.00 0.00 4.16
580 901 6.379988 ACTTTCTGAAAAACCATAACACACCT 59.620 34.615 4.18 0.00 0.00 4.00
581 902 6.783708 TTCTGAAAAACCATAACACACCTT 57.216 33.333 0.00 0.00 0.00 3.50
582 903 7.883391 TTCTGAAAAACCATAACACACCTTA 57.117 32.000 0.00 0.00 0.00 2.69
583 904 7.504924 TCTGAAAAACCATAACACACCTTAG 57.495 36.000 0.00 0.00 0.00 2.18
584 905 6.488683 TCTGAAAAACCATAACACACCTTAGG 59.511 38.462 0.00 0.00 0.00 2.69
585 906 6.130569 TGAAAAACCATAACACACCTTAGGT 58.869 36.000 0.00 0.00 35.62 3.08
586 907 6.608002 TGAAAAACCATAACACACCTTAGGTT 59.392 34.615 0.00 0.00 39.38 3.50
587 908 7.124448 TGAAAAACCATAACACACCTTAGGTTT 59.876 33.333 0.00 0.00 46.45 3.27
588 909 7.426606 AAAACCATAACACACCTTAGGTTTT 57.573 32.000 0.00 12.19 46.88 2.43
589 910 6.399639 AACCATAACACACCTTAGGTTTTG 57.600 37.500 0.00 4.62 34.45 2.44
590 911 4.830600 ACCATAACACACCTTAGGTTTTGG 59.169 41.667 0.00 5.00 44.23 3.28
595 916 3.895041 ACACACCTTAGGTTTTGGAATGG 59.105 43.478 0.00 0.00 31.02 3.16
669 990 5.638596 ACAAATACGGGTGATTTTCTTCC 57.361 39.130 0.00 0.00 0.00 3.46
670 991 5.321927 ACAAATACGGGTGATTTTCTTCCT 58.678 37.500 0.00 0.00 0.00 3.36
672 993 5.897377 AATACGGGTGATTTTCTTCCTTG 57.103 39.130 0.00 0.00 0.00 3.61
719 1040 4.787551 TCCAACAGTGTTGACCAAGTAAT 58.212 39.130 32.72 0.00 0.00 1.89
720 1041 4.578516 TCCAACAGTGTTGACCAAGTAATG 59.421 41.667 32.72 14.61 0.00 1.90
746 1067 9.971744 GCACAATGTTTGGAAATTTATACATTC 57.028 29.630 12.80 4.24 34.89 2.67
771 1092 5.594725 TGGATACTAGCGATCTTCTCTGTTT 59.405 40.000 5.47 0.00 37.61 2.83
780 1101 5.558307 CGATCTTCTCTGTTTGCTGAAATC 58.442 41.667 0.00 0.00 0.00 2.17
785 1106 6.487668 TCTTCTCTGTTTGCTGAAATCAATCA 59.512 34.615 0.00 0.00 0.00 2.57
792 1113 3.765381 TGCTGAAATCAATCAGGAACCA 58.235 40.909 6.46 0.00 43.62 3.67
793 1114 3.760151 TGCTGAAATCAATCAGGAACCAG 59.240 43.478 6.46 0.00 43.62 4.00
794 1115 4.012374 GCTGAAATCAATCAGGAACCAGA 58.988 43.478 6.46 0.00 45.60 3.86
796 1117 5.126707 GCTGAAATCAATCAGGAACCAGAAT 59.873 40.000 6.46 0.00 45.60 2.40
797 1118 6.519679 TGAAATCAATCAGGAACCAGAATG 57.480 37.500 0.00 0.00 0.00 2.67
798 1119 6.247676 TGAAATCAATCAGGAACCAGAATGA 58.752 36.000 6.49 6.49 39.69 2.57
799 1120 6.893554 TGAAATCAATCAGGAACCAGAATGAT 59.106 34.615 9.84 9.84 39.69 2.45
800 1121 6.956202 AATCAATCAGGAACCAGAATGATC 57.044 37.500 14.15 0.00 39.69 2.92
801 1122 5.705397 TCAATCAGGAACCAGAATGATCT 57.295 39.130 0.91 0.00 39.69 2.75
820 1144 2.164422 TCTATCTGCACGGACTTGTGAG 59.836 50.000 0.00 0.00 42.55 3.51
821 1145 0.969149 ATCTGCACGGACTTGTGAGA 59.031 50.000 0.00 0.00 42.55 3.27
825 1149 0.741221 GCACGGACTTGTGAGATCCC 60.741 60.000 0.00 0.00 42.55 3.85
840 1164 4.029809 CCCCACCGTCCAACCTCC 62.030 72.222 0.00 0.00 0.00 4.30
856 1180 3.465403 CCACGCCCTCTCTCCCTG 61.465 72.222 0.00 0.00 0.00 4.45
865 1189 2.757508 CTCTCCCTGGCTCTCGCA 60.758 66.667 0.00 0.00 38.10 5.10
889 1213 4.404098 AATCCCACCCGTCCACGC 62.404 66.667 0.00 0.00 38.18 5.34
900 1224 1.079681 GTCCACGCGTCCCACAATA 60.080 57.895 9.86 0.00 0.00 1.90
948 1273 0.605589 CTTCCCCAGACCAAACGGAC 60.606 60.000 0.00 0.00 0.00 4.79
1016 1341 2.903855 CATGGACATGGAGGCGCC 60.904 66.667 21.89 21.89 35.24 6.53
1017 1342 4.195334 ATGGACATGGAGGCGCCC 62.195 66.667 26.15 15.07 34.97 6.13
1053 1378 0.108329 CGCACTTCCCCATCTACGTT 60.108 55.000 0.00 0.00 0.00 3.99
1061 1386 0.529992 CCCATCTACGTTTCCTCCGC 60.530 60.000 0.00 0.00 0.00 5.54
1119 1444 1.370437 CCCCGAGGAGATGCAGATG 59.630 63.158 0.00 0.00 33.47 2.90
1146 1471 1.255882 CCATCCTCCTCTCCATCGAG 58.744 60.000 0.00 0.00 37.48 4.04
1284 1609 1.286880 CAAGGGGAAGCGCAAGTTG 59.713 57.895 11.47 0.00 41.68 3.16
1316 1641 8.204836 AGGTAATACATCTACAGATTCGCTTTT 58.795 33.333 0.00 0.00 31.21 2.27
1367 1692 2.199236 GCTTGCTATTTGCCTGATTGC 58.801 47.619 0.00 0.00 42.00 3.56
1372 1697 2.428171 GCTATTTGCCTGATTGCTCCAA 59.572 45.455 0.00 0.00 35.15 3.53
1404 1729 2.279784 GGAAGATGAGCCGAGCGG 60.280 66.667 4.20 4.20 38.57 5.52
1483 1808 5.106515 GGTTCAGGTTTCAGAGCAGTTTATC 60.107 44.000 0.00 0.00 0.00 1.75
1609 1934 1.205893 ACAGAGGGCTTCGTTGAGATC 59.794 52.381 0.00 0.00 0.00 2.75
1612 1937 0.457851 AGGGCTTCGTTGAGATCGAG 59.542 55.000 0.00 0.00 38.52 4.04
1851 2176 7.166167 GGAATCAAGTGTAAGGAGTTAAGGAA 58.834 38.462 0.00 0.00 0.00 3.36
1912 2237 6.017109 TGCTTAAGAAACTGGCTAACAAGAAG 60.017 38.462 6.67 0.00 0.00 2.85
1953 2278 2.863739 CTGCAAGATGTACGTCTCGAA 58.136 47.619 17.85 0.31 34.07 3.71
2012 2337 4.713792 ATCTGTCTAATCATGTTCCCCC 57.286 45.455 0.00 0.00 0.00 5.40
2018 2343 1.560505 AATCATGTTCCCCCTGCAAC 58.439 50.000 0.00 0.00 0.00 4.17
2052 2377 5.925506 TCTTGGACTAACGTAATGGATGA 57.074 39.130 0.00 0.00 0.00 2.92
2059 2384 7.924412 TGGACTAACGTAATGGATGATAGAAAC 59.076 37.037 0.00 0.00 0.00 2.78
2074 2399 7.537596 TGATAGAAACATCCCAACACAAAAT 57.462 32.000 0.00 0.00 0.00 1.82
2075 2400 8.642935 TGATAGAAACATCCCAACACAAAATA 57.357 30.769 0.00 0.00 0.00 1.40
2115 2441 4.486125 TCATGTGCACTATAAAGAGGCA 57.514 40.909 19.41 0.00 35.34 4.75
2116 2442 4.842574 TCATGTGCACTATAAAGAGGCAA 58.157 39.130 19.41 0.00 37.95 4.52
2141 2471 2.093447 AGATCTGCCCTTCGGTTTACAG 60.093 50.000 0.00 0.00 0.00 2.74
2147 2477 2.334838 CCCTTCGGTTTACAGAAGTCG 58.665 52.381 17.42 7.14 43.50 4.18
2165 2495 9.032420 CAGAAGTCGAACCTAATTAAGAATACC 57.968 37.037 0.00 0.00 0.00 2.73
2166 2496 8.979534 AGAAGTCGAACCTAATTAAGAATACCT 58.020 33.333 0.00 0.00 0.00 3.08
2167 2497 9.597170 GAAGTCGAACCTAATTAAGAATACCTT 57.403 33.333 0.00 0.00 38.87 3.50
2168 2498 9.955102 AAGTCGAACCTAATTAAGAATACCTTT 57.045 29.630 0.00 0.00 36.34 3.11
2169 2499 9.597170 AGTCGAACCTAATTAAGAATACCTTTC 57.403 33.333 0.00 0.00 36.34 2.62
2193 2523 4.737855 TCTCCACCTTTAGCTGTGATAC 57.262 45.455 0.00 0.00 34.37 2.24
2307 2637 6.968263 ATCAGTATGTACTATGCTGAGTGT 57.032 37.500 21.10 9.96 42.39 3.55
2312 2642 3.325870 TGTACTATGCTGAGTGTGCAAC 58.674 45.455 0.00 0.00 44.01 4.17
2360 2691 6.545666 TCTGGGTGCACATTTTACTTATATGG 59.454 38.462 20.43 0.00 0.00 2.74
2361 2692 5.068460 TGGGTGCACATTTTACTTATATGGC 59.932 40.000 20.43 0.00 0.00 4.40
2362 2693 5.301805 GGGTGCACATTTTACTTATATGGCT 59.698 40.000 20.43 0.00 0.00 4.75
2363 2694 6.488683 GGGTGCACATTTTACTTATATGGCTA 59.511 38.462 20.43 0.00 0.00 3.93
2364 2695 7.176690 GGGTGCACATTTTACTTATATGGCTAT 59.823 37.037 20.43 0.00 0.00 2.97
2365 2696 8.023128 GGTGCACATTTTACTTATATGGCTATG 58.977 37.037 20.43 0.00 0.00 2.23
2399 2730 6.825610 TGATTTGGCTTGTGACCTTTTAAAT 58.174 32.000 0.00 0.00 0.00 1.40
2400 2731 6.705381 TGATTTGGCTTGTGACCTTTTAAATG 59.295 34.615 0.00 0.00 0.00 2.32
2427 2758 8.919777 ACTTTTACTTGTTAATAGCAGTTCCT 57.080 30.769 0.00 0.00 0.00 3.36
2435 2766 5.844516 TGTTAATAGCAGTTCCTATAGGGCT 59.155 40.000 18.97 19.57 34.25 5.19
2443 2774 5.280215 GCAGTTCCTATAGGGCTATGTTCAT 60.280 44.000 18.97 0.00 35.41 2.57
2454 2785 5.485708 AGGGCTATGTTCATTATACTCCCTC 59.514 44.000 0.00 0.00 35.61 4.30
2529 2860 3.927142 CACGAGGAAATGACTTAGTGGAC 59.073 47.826 0.00 0.00 0.00 4.02
2558 2889 8.778358 CCTTATATAAGAGTGAGAATGTTTGCC 58.222 37.037 21.75 0.00 35.33 4.52
2632 2968 8.792830 TTCTATTTTCTAACAGAACTGGATGG 57.207 34.615 6.76 0.00 33.26 3.51
2662 2998 6.019748 TGTTAATGGGGTGGTATTTGACAAT 58.980 36.000 0.00 0.00 0.00 2.71
2723 3059 4.261801 TCTAGGTTGCATTTGCCTACTTC 58.738 43.478 0.00 0.00 41.18 3.01
2815 3169 8.209917 TGTCTCTTTCTTTCTTACTGGAAAAC 57.790 34.615 0.00 0.00 35.22 2.43
2857 3211 3.295093 TCTGGCTTGAAAATGTGTTCCA 58.705 40.909 0.00 0.00 0.00 3.53
2872 3226 8.592105 AATGTGTTCCAAGAAAACAATGTATG 57.408 30.769 4.53 0.00 38.29 2.39
2875 3229 6.646240 GTGTTCCAAGAAAACAATGTATGCAT 59.354 34.615 3.79 3.79 38.29 3.96
2915 3273 6.655003 ACAGACTGTTATATTGTCCCAAAGTG 59.345 38.462 1.07 0.00 0.00 3.16
2979 3337 9.667107 CAAAAATATCCAGTCCTGTAGAACTTA 57.333 33.333 0.00 0.00 0.00 2.24
3013 3371 2.156098 TCTAAAATCAACCGGGTGCAC 58.844 47.619 16.88 8.80 0.00 4.57
3026 3384 3.551407 TGCACGTGCCCCAGTGTA 61.551 61.111 35.72 13.53 40.26 2.90
3027 3385 3.047877 GCACGTGCCCCAGTGTAC 61.048 66.667 30.12 0.00 40.26 2.90
3035 3393 2.030274 GTGCCCCAGTGTACACAAAATC 60.030 50.000 27.06 13.34 33.23 2.17
3045 3403 5.760253 AGTGTACACAAAATCCACTCTTCTG 59.240 40.000 27.06 0.00 30.94 3.02
3055 3413 0.248843 CACTCTTCTGAGCCCACCTC 59.751 60.000 0.00 0.00 43.85 3.85
3058 3416 0.906756 TCTTCTGAGCCCACCTCCTG 60.907 60.000 0.00 0.00 39.98 3.86
3059 3417 2.533974 CTTCTGAGCCCACCTCCTGC 62.534 65.000 0.00 0.00 39.98 4.85
3069 3427 3.519510 GCCCACCTCCTGCAGATTATATA 59.480 47.826 17.39 0.00 0.00 0.86
3076 3434 5.719085 CCTCCTGCAGATTATATACTCTGGT 59.281 44.000 23.92 0.00 39.42 4.00
3084 3442 9.149225 GCAGATTATATACTCTGGTTGAAGATG 57.851 37.037 23.92 4.17 39.42 2.90
3094 3452 8.324163 ACTCTGGTTGAAGATGTGTTTTATAC 57.676 34.615 0.00 0.00 0.00 1.47
3112 3470 9.328845 GTTTTATACAAATAAGATCCACGGGTA 57.671 33.333 0.00 0.00 0.00 3.69
3114 3472 6.742559 ATACAAATAAGATCCACGGGTAGT 57.257 37.500 0.00 0.00 0.00 2.73
3130 3488 9.305925 CCACGGGTAGTTATTTAAAGTAACTAG 57.694 37.037 19.53 14.53 42.27 2.57
3183 3541 6.677781 GCCAATAGCTTGTTAGATGTGTTA 57.322 37.500 0.00 0.00 38.99 2.41
3193 3551 5.547465 TGTTAGATGTGTTAAGGACCTGTG 58.453 41.667 0.00 0.00 0.00 3.66
3229 3587 3.431415 ACCAGGAAACTTAAGCATTCCC 58.569 45.455 25.80 14.63 42.93 3.97
3230 3588 3.181423 ACCAGGAAACTTAAGCATTCCCA 60.181 43.478 25.80 0.00 42.93 4.37
3231 3589 3.831911 CCAGGAAACTTAAGCATTCCCAA 59.168 43.478 25.80 0.00 42.93 4.12
3282 3640 4.254492 GCTTAGTTCCTTTGGGAGTGTAG 58.746 47.826 0.00 0.00 43.29 2.74
3287 3645 1.064825 CCTTTGGGAGTGTAGTGGGT 58.935 55.000 0.00 0.00 33.58 4.51
3309 3667 7.018826 GGGTTTGTTGTTTTAGTTTTTCTTGC 58.981 34.615 0.00 0.00 0.00 4.01
3311 3669 8.233868 GGTTTGTTGTTTTAGTTTTTCTTGCAT 58.766 29.630 0.00 0.00 0.00 3.96
3314 3672 9.646427 TTGTTGTTTTAGTTTTTCTTGCATAGT 57.354 25.926 0.00 0.00 0.00 2.12
3324 3682 3.071874 TCTTGCATAGTTCCTGTTGGG 57.928 47.619 0.00 0.00 0.00 4.12
3327 3685 1.985159 TGCATAGTTCCTGTTGGGAGT 59.015 47.619 0.00 0.00 46.01 3.85
3333 3691 3.708451 AGTTCCTGTTGGGAGTTTGTTT 58.292 40.909 0.00 0.00 46.01 2.83
3334 3692 4.862371 AGTTCCTGTTGGGAGTTTGTTTA 58.138 39.130 0.00 0.00 46.01 2.01
3339 3697 7.899648 TCCTGTTGGGAGTTTGTTTATTTTA 57.100 32.000 0.00 0.00 39.58 1.52
3340 3698 7.947282 TCCTGTTGGGAGTTTGTTTATTTTAG 58.053 34.615 0.00 0.00 39.58 1.85
3422 3781 4.034285 AGTTCCTTTGGGAGTGTATTGG 57.966 45.455 0.00 0.00 43.29 3.16
3428 3787 2.595750 TGGGAGTGTATTGGGGTTTG 57.404 50.000 0.00 0.00 0.00 2.93
3445 3804 7.718525 TGGGGTTTGTTGTTTTAGTTTATCTC 58.281 34.615 0.00 0.00 0.00 2.75
3457 3816 9.525409 GTTTTAGTTTATCTCGCATAGTTCCTA 57.475 33.333 0.00 0.00 0.00 2.94
3461 3820 6.647067 AGTTTATCTCGCATAGTTCCTATTGC 59.353 38.462 0.00 0.00 0.00 3.56
3480 3839 3.701241 TGCGAGTTTGTTGATTTGGTTC 58.299 40.909 0.00 0.00 0.00 3.62
3517 3876 1.667236 CACTGCCACAGTTTGTCTCA 58.333 50.000 0.00 0.00 42.59 3.27
3521 3880 0.590195 GCCACAGTTTGTCTCAGCAG 59.410 55.000 0.00 0.00 0.00 4.24
3538 3897 8.395633 GTCTCAGCAGTTTTAACTTTGAGTAAA 58.604 33.333 21.37 9.58 42.72 2.01
3602 3962 7.456269 TCAGACCAATTGGGGTTGTTTAAATAT 59.544 33.333 27.89 1.64 42.53 1.28
3675 4035 9.252962 AGTATGTTTGAAAAGAAAATCTGCAAG 57.747 29.630 0.00 0.00 0.00 4.01
3733 4104 8.340618 AGCAGTAAACACATCTGATATGTTTT 57.659 30.769 26.35 11.44 42.43 2.43
3760 4131 7.332926 CAGACTTCATAGCATCACTAACAGTTT 59.667 37.037 0.00 0.00 33.57 2.66
3882 4255 3.947834 AGTGAAGGTCAAACAAACTCAGG 59.052 43.478 0.00 0.00 0.00 3.86
3883 4256 2.687935 TGAAGGTCAAACAAACTCAGGC 59.312 45.455 0.00 0.00 0.00 4.85
3936 4309 5.244178 CGAAATAAGTAGGCTATCACCTCCT 59.756 44.000 0.00 0.00 41.50 3.69
3955 4328 0.247460 TCGGACTGGAGATGTGCAAG 59.753 55.000 0.00 0.00 0.00 4.01
3956 4329 0.247460 CGGACTGGAGATGTGCAAGA 59.753 55.000 0.00 0.00 0.00 3.02
3959 4332 2.550855 GGACTGGAGATGTGCAAGACAA 60.551 50.000 0.00 0.00 38.36 3.18
3960 4333 3.341823 GACTGGAGATGTGCAAGACAAT 58.658 45.455 0.00 0.00 38.36 2.71
3962 4335 2.349590 TGGAGATGTGCAAGACAATCG 58.650 47.619 0.00 0.00 38.36 3.34
3963 4336 2.289631 TGGAGATGTGCAAGACAATCGT 60.290 45.455 0.00 0.00 38.36 3.73
3964 4337 2.349886 GGAGATGTGCAAGACAATCGTC 59.650 50.000 0.00 0.00 42.95 4.20
3968 4341 0.321653 GTGCAAGACAATCGTCCCCT 60.322 55.000 0.00 0.00 43.73 4.79
3969 4342 0.036388 TGCAAGACAATCGTCCCCTC 60.036 55.000 0.00 0.00 43.73 4.30
4005 4380 6.089954 GGTTCATCTGCAAAGCTGTAAATTTC 59.910 38.462 0.00 0.00 0.00 2.17
4010 4385 3.057596 TGCAAAGCTGTAAATTTCCCTCG 60.058 43.478 0.00 0.00 0.00 4.63
4062 4437 2.621055 TGGGTGATGTTACACTTTGTGC 59.379 45.455 0.00 0.00 40.22 4.57
4066 4441 3.317993 GTGATGTTACACTTTGTGCCCTT 59.682 43.478 0.00 0.00 36.98 3.95
4067 4442 3.317711 TGATGTTACACTTTGTGCCCTTG 59.682 43.478 0.00 0.00 36.98 3.61
4084 4469 4.700213 GCCCTTGTTAGATCAGCAGTTTTA 59.300 41.667 0.00 0.00 0.00 1.52
4179 4579 2.352127 GGCCTGACTGATTTTGTGCTTC 60.352 50.000 0.00 0.00 0.00 3.86
4183 4583 4.498009 CCTGACTGATTTTGTGCTTCGTTT 60.498 41.667 0.00 0.00 0.00 3.60
4210 4612 6.664428 TTGATGATGACCGGATCTTATACA 57.336 37.500 9.46 0.00 0.00 2.29
4212 4614 4.521130 TGATGACCGGATCTTATACAGC 57.479 45.455 9.46 0.00 0.00 4.40
4213 4615 3.895041 TGATGACCGGATCTTATACAGCA 59.105 43.478 9.46 1.16 0.00 4.41
4214 4616 4.021981 TGATGACCGGATCTTATACAGCAG 60.022 45.833 9.46 0.00 0.00 4.24
4220 4622 4.932200 CCGGATCTTATACAGCAGATTTCC 59.068 45.833 0.00 0.00 29.41 3.13
4233 4635 4.516698 AGCAGATTTCCGTATATTGCAAGG 59.483 41.667 4.94 0.00 32.79 3.61
4236 4638 4.516698 AGATTTCCGTATATTGCAAGGCTG 59.483 41.667 4.94 0.00 0.00 4.85
4237 4639 3.275617 TTCCGTATATTGCAAGGCTGT 57.724 42.857 4.94 0.00 0.00 4.40
4258 4660 2.948979 TGAGTTTGTACTTGGGCAACTG 59.051 45.455 0.00 0.00 33.84 3.16
4262 4664 0.548989 TGTACTTGGGCAACTGGTGT 59.451 50.000 0.00 0.00 0.00 4.16
4277 4679 6.970484 CAACTGGTGTTGTTTAGAAGCTATT 58.030 36.000 0.00 0.00 46.08 1.73
4297 4700 1.417577 GGCGTGTTTTGGTTGTGTGC 61.418 55.000 0.00 0.00 0.00 4.57
4298 4701 0.734253 GCGTGTTTTGGTTGTGTGCA 60.734 50.000 0.00 0.00 0.00 4.57
4301 4704 2.200899 GTGTTTTGGTTGTGTGCATCC 58.799 47.619 0.00 0.00 35.54 3.51
4307 4710 1.604593 GTTGTGTGCATCCTGCCCT 60.605 57.895 0.00 0.00 44.23 5.19
4308 4711 1.604308 TTGTGTGCATCCTGCCCTG 60.604 57.895 0.00 0.00 44.23 4.45
4309 4712 2.753043 GTGTGCATCCTGCCCTGG 60.753 66.667 0.00 0.00 44.23 4.45
4318 4721 2.150051 CCTGCCCTGGTCCCCTATC 61.150 68.421 0.00 0.00 0.00 2.08
4320 4723 2.039831 GCCCTGGTCCCCTATCCA 60.040 66.667 0.00 0.00 0.00 3.41
4327 4730 1.144057 GTCCCCTATCCAGCACACG 59.856 63.158 0.00 0.00 0.00 4.49
4328 4731 1.305802 TCCCCTATCCAGCACACGT 60.306 57.895 0.00 0.00 0.00 4.49
4329 4732 1.144057 CCCCTATCCAGCACACGTC 59.856 63.158 0.00 0.00 0.00 4.34
4330 4733 1.330655 CCCCTATCCAGCACACGTCT 61.331 60.000 0.00 0.00 0.00 4.18
4331 4734 0.537188 CCCTATCCAGCACACGTCTT 59.463 55.000 0.00 0.00 0.00 3.01
4344 4747 0.108585 ACGTCTTGTGAAGCCATGGT 59.891 50.000 14.67 0.00 0.00 3.55
4360 4763 0.755686 TGGTGGTGTGATTTTTGCCC 59.244 50.000 0.00 0.00 0.00 5.36
4367 4770 2.538037 GTGTGATTTTTGCCCGTTTGAC 59.462 45.455 0.00 0.00 0.00 3.18
4372 4775 0.179124 TTTTGCCCGTTTGACAGCAC 60.179 50.000 0.00 0.00 34.37 4.40
4380 4783 0.588252 GTTTGACAGCACGTGAGCAT 59.412 50.000 22.23 0.00 36.85 3.79
4385 4788 2.672874 TGACAGCACGTGAGCATTATTC 59.327 45.455 22.23 3.86 36.85 1.75
4415 4824 0.375106 GCAATACTCAGTTGGCTCGC 59.625 55.000 0.00 0.00 0.00 5.03
4426 4835 2.655685 GGCTCGCGAGGAACGATC 60.656 66.667 35.10 17.55 45.77 3.69
4449 4858 4.553323 GAATCAGCAGTTTTCACTTGCAT 58.447 39.130 0.00 0.00 32.50 3.96
4452 4861 5.710513 TCAGCAGTTTTCACTTGCATATT 57.289 34.783 0.00 0.00 32.50 1.28
4457 4866 6.865205 AGCAGTTTTCACTTGCATATTTTCTC 59.135 34.615 0.00 0.00 32.50 2.87
4458 4867 6.183359 GCAGTTTTCACTTGCATATTTTCTCG 60.183 38.462 0.00 0.00 31.22 4.04
4459 4868 6.306356 CAGTTTTCACTTGCATATTTTCTCGG 59.694 38.462 0.00 0.00 0.00 4.63
4460 4869 5.957842 TTTCACTTGCATATTTTCTCGGT 57.042 34.783 0.00 0.00 0.00 4.69
4461 4870 4.944962 TCACTTGCATATTTTCTCGGTG 57.055 40.909 0.00 0.00 0.00 4.94
4465 4874 2.984562 TGCATATTTTCTCGGTGCAGA 58.015 42.857 0.00 0.00 40.51 4.26
4488 4897 3.343421 GAACGTGGCGCCGAGTTT 61.343 61.111 30.90 18.63 0.00 2.66
4491 4900 3.645975 CGTGGCGCCGAGTTTGTT 61.646 61.111 23.90 0.00 0.00 2.83
4492 4901 2.251371 GTGGCGCCGAGTTTGTTC 59.749 61.111 23.90 0.00 0.00 3.18
4515 4924 2.045926 GGGACATGGCACGAGCTT 60.046 61.111 0.00 0.00 41.70 3.74
4516 4925 2.401766 GGGACATGGCACGAGCTTG 61.402 63.158 0.00 0.00 41.70 4.01
4520 4929 2.281692 ATGGCACGAGCTTGCACA 60.282 55.556 12.28 8.07 44.94 4.57
4521 4930 2.620112 ATGGCACGAGCTTGCACAC 61.620 57.895 12.28 0.00 44.94 3.82
4524 4933 2.546321 CACGAGCTTGCACACGTC 59.454 61.111 0.00 0.00 34.60 4.34
4528 4937 2.356313 AGCTTGCACACGTCTCCG 60.356 61.111 0.00 0.00 40.83 4.63
4534 4943 1.588674 TGCACACGTCTCCGAAAAAT 58.411 45.000 0.00 0.00 37.88 1.82
4548 4957 3.254657 CCGAAAAATTGGCAGGAGTAACA 59.745 43.478 0.00 0.00 0.00 2.41
4549 4958 4.475944 CGAAAAATTGGCAGGAGTAACAG 58.524 43.478 0.00 0.00 0.00 3.16
4560 4969 1.201880 GGAGTAACAGGGTCACGTCTC 59.798 57.143 0.00 0.00 0.00 3.36
4565 4974 2.031616 AGGGTCACGTCTCGTCGA 59.968 61.111 0.00 0.00 38.32 4.20
4584 4993 4.327854 CGATTGCCTCGCCTTATTTATC 57.672 45.455 0.00 0.00 41.14 1.75
4585 4994 3.125316 CGATTGCCTCGCCTTATTTATCC 59.875 47.826 0.00 0.00 41.14 2.59
4586 4995 2.561478 TGCCTCGCCTTATTTATCCC 57.439 50.000 0.00 0.00 0.00 3.85
4587 4996 1.073284 TGCCTCGCCTTATTTATCCCC 59.927 52.381 0.00 0.00 0.00 4.81
4588 4997 1.613520 GCCTCGCCTTATTTATCCCCC 60.614 57.143 0.00 0.00 0.00 5.40
4589 4998 1.985895 CCTCGCCTTATTTATCCCCCT 59.014 52.381 0.00 0.00 0.00 4.79
4590 4999 2.375509 CCTCGCCTTATTTATCCCCCTT 59.624 50.000 0.00 0.00 0.00 3.95
4591 5000 3.181433 CCTCGCCTTATTTATCCCCCTTT 60.181 47.826 0.00 0.00 0.00 3.11
4592 5001 3.821033 CTCGCCTTATTTATCCCCCTTTG 59.179 47.826 0.00 0.00 0.00 2.77
4593 5002 2.890945 CGCCTTATTTATCCCCCTTTGG 59.109 50.000 0.00 0.00 0.00 3.28
4594 5003 2.632996 GCCTTATTTATCCCCCTTTGGC 59.367 50.000 0.00 0.00 0.00 4.52
4595 5004 3.694242 GCCTTATTTATCCCCCTTTGGCT 60.694 47.826 0.00 0.00 34.42 4.75
4596 5005 4.152647 CCTTATTTATCCCCCTTTGGCTC 58.847 47.826 0.00 0.00 0.00 4.70
4597 5006 4.387437 CCTTATTTATCCCCCTTTGGCTCA 60.387 45.833 0.00 0.00 0.00 4.26
4598 5007 2.525105 TTTATCCCCCTTTGGCTCAC 57.475 50.000 0.00 0.00 0.00 3.51
4599 5008 1.681229 TTATCCCCCTTTGGCTCACT 58.319 50.000 0.00 0.00 0.00 3.41
4600 5009 0.918983 TATCCCCCTTTGGCTCACTG 59.081 55.000 0.00 0.00 0.00 3.66
4601 5010 2.505364 ATCCCCCTTTGGCTCACTGC 62.505 60.000 0.00 0.00 41.94 4.40
4611 5020 4.366684 CTCACTGCCCCAACCCCC 62.367 72.222 0.00 0.00 0.00 5.40
4621 5030 4.694987 CAACCCCCGCCACCCATT 62.695 66.667 0.00 0.00 0.00 3.16
4622 5031 3.922364 AACCCCCGCCACCCATTT 61.922 61.111 0.00 0.00 0.00 2.32
4623 5032 3.897681 AACCCCCGCCACCCATTTC 62.898 63.158 0.00 0.00 0.00 2.17
4624 5033 4.374584 CCCCCGCCACCCATTTCA 62.375 66.667 0.00 0.00 0.00 2.69
4625 5034 2.043046 CCCCGCCACCCATTTCAT 60.043 61.111 0.00 0.00 0.00 2.57
4626 5035 2.127232 CCCCGCCACCCATTTCATC 61.127 63.158 0.00 0.00 0.00 2.92
4627 5036 2.127232 CCCGCCACCCATTTCATCC 61.127 63.158 0.00 0.00 0.00 3.51
4628 5037 2.127232 CCGCCACCCATTTCATCCC 61.127 63.158 0.00 0.00 0.00 3.85
4629 5038 1.076777 CGCCACCCATTTCATCCCT 60.077 57.895 0.00 0.00 0.00 4.20
4630 5039 0.684153 CGCCACCCATTTCATCCCTT 60.684 55.000 0.00 0.00 0.00 3.95
4631 5040 1.114627 GCCACCCATTTCATCCCTTC 58.885 55.000 0.00 0.00 0.00 3.46
4632 5041 1.619432 GCCACCCATTTCATCCCTTCA 60.619 52.381 0.00 0.00 0.00 3.02
4633 5042 2.818921 CCACCCATTTCATCCCTTCAA 58.181 47.619 0.00 0.00 0.00 2.69
4634 5043 2.762327 CCACCCATTTCATCCCTTCAAG 59.238 50.000 0.00 0.00 0.00 3.02
4635 5044 2.167075 CACCCATTTCATCCCTTCAAGC 59.833 50.000 0.00 0.00 0.00 4.01
4636 5045 2.043526 ACCCATTTCATCCCTTCAAGCT 59.956 45.455 0.00 0.00 0.00 3.74
4637 5046 2.692041 CCCATTTCATCCCTTCAAGCTC 59.308 50.000 0.00 0.00 0.00 4.09
4638 5047 3.626729 CCCATTTCATCCCTTCAAGCTCT 60.627 47.826 0.00 0.00 0.00 4.09
4639 5048 4.021916 CCATTTCATCCCTTCAAGCTCTT 58.978 43.478 0.00 0.00 0.00 2.85
4640 5049 4.097589 CCATTTCATCCCTTCAAGCTCTTC 59.902 45.833 0.00 0.00 0.00 2.87
4641 5050 3.356529 TTCATCCCTTCAAGCTCTTCC 57.643 47.619 0.00 0.00 0.00 3.46
4642 5051 2.555664 TCATCCCTTCAAGCTCTTCCT 58.444 47.619 0.00 0.00 0.00 3.36
4643 5052 2.503356 TCATCCCTTCAAGCTCTTCCTC 59.497 50.000 0.00 0.00 0.00 3.71
4644 5053 1.280457 TCCCTTCAAGCTCTTCCTCC 58.720 55.000 0.00 0.00 0.00 4.30
4645 5054 0.254462 CCCTTCAAGCTCTTCCTCCC 59.746 60.000 0.00 0.00 0.00 4.30
4646 5055 0.107945 CCTTCAAGCTCTTCCTCCCG 60.108 60.000 0.00 0.00 0.00 5.14
4647 5056 0.107945 CTTCAAGCTCTTCCTCCCGG 60.108 60.000 0.00 0.00 0.00 5.73
4648 5057 1.553690 TTCAAGCTCTTCCTCCCGGG 61.554 60.000 16.85 16.85 0.00 5.73
4649 5058 1.990060 CAAGCTCTTCCTCCCGGGA 60.990 63.158 25.06 25.06 43.41 5.14
4656 5065 4.991798 TCCTCCCGGGAAGTTTCT 57.008 55.556 26.68 0.00 41.91 2.52
4657 5066 3.175498 TCCTCCCGGGAAGTTTCTT 57.825 52.632 26.68 0.00 41.91 2.52
4658 5067 0.981943 TCCTCCCGGGAAGTTTCTTC 59.018 55.000 26.68 1.39 41.91 2.87
4659 5068 0.690762 CCTCCCGGGAAGTTTCTTCA 59.309 55.000 26.68 0.00 37.23 3.02
4660 5069 1.282157 CCTCCCGGGAAGTTTCTTCAT 59.718 52.381 26.68 0.00 37.23 2.57
4661 5070 2.633488 CTCCCGGGAAGTTTCTTCATC 58.367 52.381 26.68 3.05 0.00 2.92
4662 5071 1.066430 TCCCGGGAAGTTTCTTCATCG 60.066 52.381 24.50 12.22 0.00 3.84
4663 5072 1.066430 CCCGGGAAGTTTCTTCATCGA 60.066 52.381 18.48 0.00 0.00 3.59
4664 5073 2.000447 CCGGGAAGTTTCTTCATCGAC 59.000 52.381 18.16 2.07 0.00 4.20
4665 5074 1.654105 CGGGAAGTTTCTTCATCGACG 59.346 52.381 10.88 0.00 0.00 5.12
4666 5075 2.670229 CGGGAAGTTTCTTCATCGACGA 60.670 50.000 0.00 0.00 0.00 4.20
4667 5076 2.924290 GGGAAGTTTCTTCATCGACGAG 59.076 50.000 3.01 0.00 0.00 4.18
4668 5077 2.345942 GGAAGTTTCTTCATCGACGAGC 59.654 50.000 3.01 0.00 0.00 5.03
4669 5078 2.724977 AGTTTCTTCATCGACGAGCA 57.275 45.000 3.01 0.00 0.00 4.26
4670 5079 3.238108 AGTTTCTTCATCGACGAGCAT 57.762 42.857 3.01 0.00 0.00 3.79
4671 5080 3.182967 AGTTTCTTCATCGACGAGCATC 58.817 45.455 3.01 0.00 0.00 3.91
4683 5092 2.911594 GAGCATCGCCATCTTCTCC 58.088 57.895 0.00 0.00 0.00 3.71
4684 5093 0.602372 GAGCATCGCCATCTTCTCCC 60.602 60.000 0.00 0.00 0.00 4.30
4685 5094 1.958205 GCATCGCCATCTTCTCCCG 60.958 63.158 0.00 0.00 0.00 5.14
4686 5095 1.301244 CATCGCCATCTTCTCCCGG 60.301 63.158 0.00 0.00 0.00 5.73
4687 5096 2.511452 ATCGCCATCTTCTCCCGGG 61.511 63.158 16.85 16.85 0.00 5.73
4688 5097 2.946988 ATCGCCATCTTCTCCCGGGA 62.947 60.000 25.06 25.06 0.00 5.14
4689 5098 2.731571 CGCCATCTTCTCCCGGGAA 61.732 63.158 26.68 10.38 0.00 3.97
4690 5099 1.147153 GCCATCTTCTCCCGGGAAG 59.853 63.158 26.68 20.38 42.72 3.46
4691 5100 1.627297 GCCATCTTCTCCCGGGAAGT 61.627 60.000 26.68 7.96 42.19 3.01
4692 5101 0.912486 CCATCTTCTCCCGGGAAGTT 59.088 55.000 26.68 12.30 42.19 2.66
4693 5102 1.282157 CCATCTTCTCCCGGGAAGTTT 59.718 52.381 26.68 9.38 42.19 2.66
4694 5103 2.633488 CATCTTCTCCCGGGAAGTTTC 58.367 52.381 26.68 0.00 42.19 2.78
4695 5104 2.025636 TCTTCTCCCGGGAAGTTTCT 57.974 50.000 26.68 0.00 42.19 2.52
4696 5105 2.335933 TCTTCTCCCGGGAAGTTTCTT 58.664 47.619 26.68 0.00 42.19 2.52
4697 5106 2.302157 TCTTCTCCCGGGAAGTTTCTTC 59.698 50.000 26.68 1.39 42.19 2.87
4698 5107 1.724545 TCTCCCGGGAAGTTTCTTCA 58.275 50.000 26.68 0.00 0.00 3.02
4699 5108 2.266279 TCTCCCGGGAAGTTTCTTCAT 58.734 47.619 26.68 0.00 0.00 2.57
4700 5109 2.236395 TCTCCCGGGAAGTTTCTTCATC 59.764 50.000 26.68 3.05 0.00 2.92
4701 5110 1.066430 TCCCGGGAAGTTTCTTCATCG 60.066 52.381 24.50 12.22 0.00 3.84
4702 5111 1.066430 CCCGGGAAGTTTCTTCATCGA 60.066 52.381 18.48 0.00 0.00 3.59
4703 5112 2.000447 CCGGGAAGTTTCTTCATCGAC 59.000 52.381 18.16 2.07 0.00 4.20
4704 5113 1.654105 CGGGAAGTTTCTTCATCGACG 59.346 52.381 10.88 0.00 0.00 5.12
4705 5114 2.670229 CGGGAAGTTTCTTCATCGACGA 60.670 50.000 0.00 0.00 0.00 4.20
4706 5115 2.924290 GGGAAGTTTCTTCATCGACGAG 59.076 50.000 3.01 0.00 0.00 4.18
4707 5116 2.345942 GGAAGTTTCTTCATCGACGAGC 59.654 50.000 3.01 0.00 0.00 5.03
4708 5117 2.724977 AGTTTCTTCATCGACGAGCA 57.275 45.000 3.01 0.00 0.00 4.26
4709 5118 3.238108 AGTTTCTTCATCGACGAGCAT 57.762 42.857 3.01 0.00 0.00 3.79
4710 5119 3.182967 AGTTTCTTCATCGACGAGCATC 58.817 45.455 3.01 0.00 0.00 3.91
4722 5131 2.911594 GAGCATCGCCATCTTCTCC 58.088 57.895 0.00 0.00 0.00 3.71
4723 5132 0.943359 GAGCATCGCCATCTTCTCCG 60.943 60.000 0.00 0.00 0.00 4.63
4724 5133 1.958205 GCATCGCCATCTTCTCCGG 60.958 63.158 0.00 0.00 0.00 5.14
4725 5134 1.443407 CATCGCCATCTTCTCCGGT 59.557 57.895 0.00 0.00 0.00 5.28
4726 5135 0.179073 CATCGCCATCTTCTCCGGTT 60.179 55.000 0.00 0.00 0.00 4.44
4727 5136 0.541863 ATCGCCATCTTCTCCGGTTT 59.458 50.000 0.00 0.00 0.00 3.27
4728 5137 0.391130 TCGCCATCTTCTCCGGTTTG 60.391 55.000 0.00 0.00 0.00 2.93
4729 5138 1.803289 GCCATCTTCTCCGGTTTGC 59.197 57.895 0.00 0.00 0.00 3.68
4730 5139 1.982073 GCCATCTTCTCCGGTTTGCG 61.982 60.000 0.00 0.00 0.00 4.85
4731 5140 1.369091 CCATCTTCTCCGGTTTGCGG 61.369 60.000 0.00 0.00 0.00 5.69
4732 5141 0.673644 CATCTTCTCCGGTTTGCGGT 60.674 55.000 0.00 0.00 0.00 5.68
4733 5142 0.673644 ATCTTCTCCGGTTTGCGGTG 60.674 55.000 0.00 0.00 0.00 4.94
4734 5143 2.281208 TTCTCCGGTTTGCGGTGG 60.281 61.111 0.00 0.00 0.00 4.61
4739 5148 4.160635 CGGTTTGCGGTGGCGATC 62.161 66.667 0.00 0.00 44.10 3.69
4740 5149 3.810896 GGTTTGCGGTGGCGATCC 61.811 66.667 0.00 0.00 44.10 3.36
4753 5219 0.391228 GCGATCCTTCTTCCTCCTCC 59.609 60.000 0.00 0.00 0.00 4.30
4807 5291 7.275920 AGTTCAATCACTCTCTACTTGTTGTT 58.724 34.615 0.00 0.00 0.00 2.83
4813 5297 6.578944 TCACTCTCTACTTGTTGTTGCTTAA 58.421 36.000 0.00 0.00 0.00 1.85
4816 5300 9.155975 CACTCTCTACTTGTTGTTGCTTAATAT 57.844 33.333 0.00 0.00 0.00 1.28
4817 5301 9.155975 ACTCTCTACTTGTTGTTGCTTAATATG 57.844 33.333 0.00 0.00 0.00 1.78
4818 5302 7.974675 TCTCTACTTGTTGTTGCTTAATATGC 58.025 34.615 0.00 0.00 0.00 3.14
4819 5303 7.824289 TCTCTACTTGTTGTTGCTTAATATGCT 59.176 33.333 0.00 0.00 0.00 3.79
4820 5304 9.098355 CTCTACTTGTTGTTGCTTAATATGCTA 57.902 33.333 0.00 0.00 0.00 3.49
4821 5305 8.879759 TCTACTTGTTGTTGCTTAATATGCTAC 58.120 33.333 5.95 5.95 36.87 3.58
4822 5306 7.447374 ACTTGTTGTTGCTTAATATGCTACA 57.553 32.000 10.28 10.28 42.35 2.74
4823 5307 7.305474 ACTTGTTGTTGCTTAATATGCTACAC 58.695 34.615 13.02 9.90 43.32 2.90
4824 5308 6.809630 TGTTGTTGCTTAATATGCTACACA 57.190 33.333 13.02 11.67 43.32 3.72
4825 5309 7.389803 TGTTGTTGCTTAATATGCTACACAT 57.610 32.000 13.02 0.00 43.32 3.21
4826 5310 7.249858 TGTTGTTGCTTAATATGCTACACATG 58.750 34.615 13.02 0.00 43.32 3.21
4827 5311 7.120432 TGTTGTTGCTTAATATGCTACACATGA 59.880 33.333 13.02 0.00 43.32 3.07
4828 5312 7.806409 TGTTGCTTAATATGCTACACATGAT 57.194 32.000 10.28 0.00 40.12 2.45
4829 5313 7.641760 TGTTGCTTAATATGCTACACATGATG 58.358 34.615 10.28 0.00 40.12 3.07
4830 5314 7.282901 TGTTGCTTAATATGCTACACATGATGT 59.717 33.333 10.28 2.78 46.06 3.06
4831 5315 7.806409 TGCTTAATATGCTACACATGATGTT 57.194 32.000 0.00 0.00 43.19 2.71
4832 5316 7.641760 TGCTTAATATGCTACACATGATGTTG 58.358 34.615 0.00 2.76 43.19 3.33
4833 5317 7.282901 TGCTTAATATGCTACACATGATGTTGT 59.717 33.333 0.00 0.64 43.19 3.32
4841 5325 3.818961 CACATGATGTTGTGTGAGGAC 57.181 47.619 0.00 0.00 46.58 3.85
4842 5326 2.158254 CACATGATGTTGTGTGAGGACG 59.842 50.000 0.00 0.00 46.58 4.79
4843 5327 2.224281 ACATGATGTTGTGTGAGGACGT 60.224 45.455 0.00 0.00 0.00 4.34
4844 5328 1.864565 TGATGTTGTGTGAGGACGTG 58.135 50.000 0.00 0.00 0.00 4.49
4845 5329 1.148310 GATGTTGTGTGAGGACGTGG 58.852 55.000 0.00 0.00 0.00 4.94
4846 5330 0.468226 ATGTTGTGTGAGGACGTGGT 59.532 50.000 0.00 0.00 0.00 4.16
4847 5331 1.112950 TGTTGTGTGAGGACGTGGTA 58.887 50.000 0.00 0.00 0.00 3.25
4848 5332 1.067974 TGTTGTGTGAGGACGTGGTAG 59.932 52.381 0.00 0.00 0.00 3.18
4849 5333 1.338973 GTTGTGTGAGGACGTGGTAGA 59.661 52.381 0.00 0.00 0.00 2.59
4850 5334 1.919240 TGTGTGAGGACGTGGTAGAT 58.081 50.000 0.00 0.00 0.00 1.98
4851 5335 1.816835 TGTGTGAGGACGTGGTAGATC 59.183 52.381 0.00 0.00 0.00 2.75
4852 5336 1.816835 GTGTGAGGACGTGGTAGATCA 59.183 52.381 0.00 0.00 0.00 2.92
4853 5337 2.427453 GTGTGAGGACGTGGTAGATCAT 59.573 50.000 0.00 0.00 0.00 2.45
4854 5338 3.630769 GTGTGAGGACGTGGTAGATCATA 59.369 47.826 0.00 0.00 0.00 2.15
4855 5339 4.278669 GTGTGAGGACGTGGTAGATCATAT 59.721 45.833 0.00 0.00 0.00 1.78
4856 5340 5.472478 GTGTGAGGACGTGGTAGATCATATA 59.528 44.000 0.00 0.00 0.00 0.86
4857 5341 5.472478 TGTGAGGACGTGGTAGATCATATAC 59.528 44.000 0.00 0.00 0.00 1.47
4858 5342 5.706369 GTGAGGACGTGGTAGATCATATACT 59.294 44.000 0.00 0.00 0.00 2.12
4859 5343 6.877855 GTGAGGACGTGGTAGATCATATACTA 59.122 42.308 0.00 0.00 0.00 1.82
4860 5344 7.064847 GTGAGGACGTGGTAGATCATATACTAG 59.935 44.444 0.00 0.00 0.00 2.57
4861 5345 7.018487 AGGACGTGGTAGATCATATACTAGT 57.982 40.000 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 9.636789 AAGTAACTTAAACCAACAATCTAAGGT 57.363 29.630 0.00 0.00 35.47 3.50
136 173 1.882912 TGTCATGGAGTGTTCACTGC 58.117 50.000 15.61 15.61 0.00 4.40
217 254 1.222115 GCTAAGCGGGATAGTTGCGG 61.222 60.000 0.00 0.00 0.00 5.69
224 261 4.820897 CAAGTGATATGCTAAGCGGGATA 58.179 43.478 0.00 0.00 0.00 2.59
230 267 2.306799 GCGCAAGTGATATGCTAAGC 57.693 50.000 0.30 0.00 41.64 3.09
255 296 1.211949 GGGTGCTAAGCTTGATACCCA 59.788 52.381 28.08 9.19 45.53 4.51
257 298 1.211949 TGGGGTGCTAAGCTTGATACC 59.788 52.381 9.86 13.47 0.00 2.73
263 304 3.449746 TGTAAATGGGGTGCTAAGCTT 57.550 42.857 3.48 3.48 0.00 3.74
272 313 2.262637 TCCTCGAGTTGTAAATGGGGT 58.737 47.619 12.31 0.00 0.00 4.95
273 314 3.270877 CTTCCTCGAGTTGTAAATGGGG 58.729 50.000 12.31 0.00 0.00 4.96
278 319 3.250744 CATCGCTTCCTCGAGTTGTAAA 58.749 45.455 12.31 0.00 42.14 2.01
279 320 2.230508 ACATCGCTTCCTCGAGTTGTAA 59.769 45.455 12.31 0.00 42.14 2.41
281 322 0.603569 ACATCGCTTCCTCGAGTTGT 59.396 50.000 12.31 0.81 42.14 3.32
284 325 1.153745 GCACATCGCTTCCTCGAGT 60.154 57.895 12.31 0.00 42.14 4.18
298 339 9.255304 GAAAGTATTTAAGGAAACAAATGCACA 57.745 29.630 0.00 0.00 39.27 4.57
309 350 8.445361 AGTCTAGGGTGAAAGTATTTAAGGAA 57.555 34.615 0.00 0.00 39.27 3.36
313 354 9.643693 CGTTAAGTCTAGGGTGAAAGTATTTAA 57.356 33.333 0.00 0.00 39.27 1.52
314 355 8.806146 ACGTTAAGTCTAGGGTGAAAGTATTTA 58.194 33.333 0.00 0.00 39.27 1.40
315 356 7.674120 ACGTTAAGTCTAGGGTGAAAGTATTT 58.326 34.615 0.00 0.00 43.98 1.40
316 357 7.237209 ACGTTAAGTCTAGGGTGAAAGTATT 57.763 36.000 0.00 0.00 0.00 1.89
317 358 6.847421 ACGTTAAGTCTAGGGTGAAAGTAT 57.153 37.500 0.00 0.00 0.00 2.12
319 360 5.335191 CGTACGTTAAGTCTAGGGTGAAAGT 60.335 44.000 7.22 0.00 0.00 2.66
320 361 5.091431 CGTACGTTAAGTCTAGGGTGAAAG 58.909 45.833 7.22 0.00 0.00 2.62
323 364 3.937814 TCGTACGTTAAGTCTAGGGTGA 58.062 45.455 16.05 0.00 0.00 4.02
324 365 4.889832 ATCGTACGTTAAGTCTAGGGTG 57.110 45.455 16.05 0.00 0.00 4.61
325 366 7.934120 AGTATTATCGTACGTTAAGTCTAGGGT 59.066 37.037 20.02 7.17 0.00 4.34
327 368 9.202273 AGAGTATTATCGTACGTTAAGTCTAGG 57.798 37.037 20.02 0.00 0.00 3.02
329 370 9.534565 ACAGAGTATTATCGTACGTTAAGTCTA 57.465 33.333 20.02 8.64 0.00 2.59
330 371 8.430801 ACAGAGTATTATCGTACGTTAAGTCT 57.569 34.615 20.02 18.66 0.00 3.24
331 372 9.152851 GAACAGAGTATTATCGTACGTTAAGTC 57.847 37.037 20.02 16.18 0.00 3.01
332 373 8.125448 GGAACAGAGTATTATCGTACGTTAAGT 58.875 37.037 20.02 11.01 0.00 2.24
333 374 8.124823 TGGAACAGAGTATTATCGTACGTTAAG 58.875 37.037 20.02 10.51 0.00 1.85
334 375 7.984391 TGGAACAGAGTATTATCGTACGTTAA 58.016 34.615 18.27 18.27 0.00 2.01
354 671 3.936453 TGACGCACCTTATGTTATGGAAC 59.064 43.478 0.00 0.00 36.00 3.62
357 674 5.499139 AATTGACGCACCTTATGTTATGG 57.501 39.130 0.00 0.00 0.00 2.74
360 677 6.561737 TGAAAATTGACGCACCTTATGTTA 57.438 33.333 0.00 0.00 0.00 2.41
363 680 8.459521 TTTTATGAAAATTGACGCACCTTATG 57.540 30.769 0.00 0.00 0.00 1.90
369 686 6.984740 TGACTTTTATGAAAATTGACGCAC 57.015 33.333 0.00 0.00 0.00 5.34
461 782 9.874205 ATTCGATCCATCACAAAATGTATTTTT 57.126 25.926 0.04 0.00 37.86 1.94
466 787 7.806409 ATCATTCGATCCATCACAAAATGTA 57.194 32.000 0.00 0.00 0.00 2.29
470 791 7.622893 TTGTATCATTCGATCCATCACAAAA 57.377 32.000 0.00 0.00 32.73 2.44
524 845 9.853555 CTTATGCATGTTTGACTATGGTTTTAA 57.146 29.630 10.16 0.00 0.00 1.52
530 851 9.289303 GTTAAACTTATGCATGTTTGACTATGG 57.711 33.333 20.91 0.00 38.64 2.74
560 881 6.264518 ACCTAAGGTGTGTTATGGTTTTTCAG 59.735 38.462 0.00 0.00 32.98 3.02
568 889 5.074115 TCCAAAACCTAAGGTGTGTTATGG 58.926 41.667 0.00 0.00 35.34 2.74
574 895 4.148838 TCCATTCCAAAACCTAAGGTGTG 58.851 43.478 0.00 0.00 35.34 3.82
579 900 5.816682 ACTACCTCCATTCCAAAACCTAAG 58.183 41.667 0.00 0.00 0.00 2.18
580 901 5.853572 ACTACCTCCATTCCAAAACCTAA 57.146 39.130 0.00 0.00 0.00 2.69
581 902 5.853572 AACTACCTCCATTCCAAAACCTA 57.146 39.130 0.00 0.00 0.00 3.08
582 903 4.741928 AACTACCTCCATTCCAAAACCT 57.258 40.909 0.00 0.00 0.00 3.50
583 904 5.801531 AAAACTACCTCCATTCCAAAACC 57.198 39.130 0.00 0.00 0.00 3.27
719 1040 9.499479 AATGTATAAATTTCCAAACATTGTGCA 57.501 25.926 14.50 0.00 36.49 4.57
720 1041 9.971744 GAATGTATAAATTTCCAAACATTGTGC 57.028 29.630 17.78 6.95 37.60 4.57
746 1067 4.759693 ACAGAGAAGATCGCTAGTATCCAG 59.240 45.833 0.00 0.00 0.00 3.86
752 1073 3.194542 AGCAAACAGAGAAGATCGCTAGT 59.805 43.478 0.00 0.00 0.00 2.57
771 1092 3.760151 CTGGTTCCTGATTGATTTCAGCA 59.240 43.478 0.00 0.00 41.50 4.41
780 1101 7.388224 CAGATAGATCATTCTGGTTCCTGATTG 59.612 40.741 14.16 11.63 36.53 2.67
785 1106 4.657504 TGCAGATAGATCATTCTGGTTCCT 59.342 41.667 20.25 0.00 39.79 3.36
790 1111 3.006217 TCCGTGCAGATAGATCATTCTGG 59.994 47.826 20.25 8.87 39.79 3.86
792 1113 3.894427 AGTCCGTGCAGATAGATCATTCT 59.106 43.478 0.00 0.00 35.90 2.40
793 1114 4.250116 AGTCCGTGCAGATAGATCATTC 57.750 45.455 0.00 0.00 0.00 2.67
794 1115 4.141846 ACAAGTCCGTGCAGATAGATCATT 60.142 41.667 0.00 0.00 0.00 2.57
796 1117 2.760650 ACAAGTCCGTGCAGATAGATCA 59.239 45.455 0.00 0.00 0.00 2.92
797 1118 3.119291 CACAAGTCCGTGCAGATAGATC 58.881 50.000 0.00 0.00 0.00 2.75
798 1119 2.760650 TCACAAGTCCGTGCAGATAGAT 59.239 45.455 0.00 0.00 36.80 1.98
799 1120 2.164422 CTCACAAGTCCGTGCAGATAGA 59.836 50.000 0.00 0.00 36.80 1.98
800 1121 2.164422 TCTCACAAGTCCGTGCAGATAG 59.836 50.000 0.00 0.00 36.80 2.08
801 1122 2.167662 TCTCACAAGTCCGTGCAGATA 58.832 47.619 0.00 0.00 36.80 1.98
820 1144 2.253403 GAGGTTGGACGGTGGGGATC 62.253 65.000 0.00 0.00 0.00 3.36
821 1145 2.204090 AGGTTGGACGGTGGGGAT 60.204 61.111 0.00 0.00 0.00 3.85
825 1149 2.032071 GTGGAGGTTGGACGGTGG 59.968 66.667 0.00 0.00 0.00 4.61
840 1164 3.465403 CCAGGGAGAGAGGGCGTG 61.465 72.222 0.00 0.00 0.00 5.34
865 1189 0.546598 GACGGGTGGGATTCCTTGAT 59.453 55.000 2.01 0.00 0.00 2.57
889 1213 1.078001 GGTGGGGTATTGTGGGACG 60.078 63.158 0.00 0.00 0.00 4.79
895 1219 2.353573 GTGGCGGTGGGGTATTGT 59.646 61.111 0.00 0.00 0.00 2.71
924 1248 4.649705 TGGTCTGGGGAAGCGGGA 62.650 66.667 0.00 0.00 0.00 5.14
936 1260 1.370064 CTTCCGGTCCGTTTGGTCT 59.630 57.895 11.06 0.00 36.30 3.85
948 1273 2.107141 GGCTCGTGATCCTTCCGG 59.893 66.667 0.00 0.00 0.00 5.14
1024 1349 3.255379 GAAGTGCGGATCGTCGGC 61.255 66.667 9.48 9.48 42.22 5.54
1032 1357 1.672854 CGTAGATGGGGAAGTGCGGA 61.673 60.000 0.00 0.00 0.00 5.54
1061 1386 1.588139 GTAATGCCGTCGTCCTCCG 60.588 63.158 0.00 0.00 38.13 4.63
1158 1483 4.530857 GTCGGGATGTCGGCTGGG 62.531 72.222 0.00 0.00 0.00 4.45
1162 1487 4.222847 GGAGGTCGGGATGTCGGC 62.223 72.222 0.00 0.00 0.00 5.54
1166 1491 1.075896 GAGGAGGAGGTCGGGATGT 60.076 63.158 0.00 0.00 0.00 3.06
1235 1560 1.555533 GGGACTCTTCGGTGGATTTCT 59.444 52.381 0.00 0.00 0.00 2.52
1284 1609 9.262358 GAATCTGTAGATGTATTACCTTCCAAC 57.738 37.037 0.00 0.00 34.49 3.77
1316 1641 2.792196 GCGCATCTGCATTGAAAATCGA 60.792 45.455 0.30 0.00 42.21 3.59
1367 1692 4.129380 TCCACATCGCAATAAGATTGGAG 58.871 43.478 1.64 0.00 34.04 3.86
1372 1697 5.614308 TCATCTTCCACATCGCAATAAGAT 58.386 37.500 0.00 0.00 34.80 2.40
1379 1704 0.462581 GGCTCATCTTCCACATCGCA 60.463 55.000 0.00 0.00 0.00 5.10
1380 1705 1.493950 CGGCTCATCTTCCACATCGC 61.494 60.000 0.00 0.00 0.00 4.58
1381 1706 0.103026 TCGGCTCATCTTCCACATCG 59.897 55.000 0.00 0.00 0.00 3.84
1382 1707 1.863267 CTCGGCTCATCTTCCACATC 58.137 55.000 0.00 0.00 0.00 3.06
1483 1808 2.029288 ATGCGAACAGTGGCTCACG 61.029 57.895 0.00 0.00 39.64 4.35
1609 1934 0.244721 TGATATCTCGGCATGGCTCG 59.755 55.000 18.09 7.96 0.00 5.03
1612 1937 2.012673 GGAATGATATCTCGGCATGGC 58.987 52.381 9.69 9.69 0.00 4.40
1822 2147 3.576982 ACTCCTTACACTTGATTCCGTCA 59.423 43.478 0.00 0.00 34.25 4.35
1851 2176 0.539051 CTTCTCGTCATCCCCAAGCT 59.461 55.000 0.00 0.00 0.00 3.74
1953 2278 0.179062 GAGCAAGCACCCATCGATCT 60.179 55.000 0.00 0.00 0.00 2.75
1959 2284 1.272313 ACTTCATGAGCAAGCACCCAT 60.272 47.619 0.00 0.00 0.00 4.00
2018 2343 1.005215 AGTCCAAGAAAGGGGCATGAG 59.995 52.381 0.00 0.00 30.51 2.90
2027 2352 6.816640 TCATCCATTACGTTAGTCCAAGAAAG 59.183 38.462 0.00 0.00 0.00 2.62
2059 2384 6.780457 AGAGGAATATTTTGTGTTGGGATG 57.220 37.500 0.00 0.00 0.00 3.51
2067 2392 9.492973 ACAAAATTGGAAGAGGAATATTTTGTG 57.507 29.630 17.76 1.10 46.21 3.33
2074 2399 8.306038 CACATGAACAAAATTGGAAGAGGAATA 58.694 33.333 0.00 0.00 0.00 1.75
2075 2400 7.156673 CACATGAACAAAATTGGAAGAGGAAT 58.843 34.615 0.00 0.00 0.00 3.01
2133 2463 8.538409 TTAATTAGGTTCGACTTCTGTAAACC 57.462 34.615 0.00 0.00 40.01 3.27
2141 2471 9.597170 AAGGTATTCTTAATTAGGTTCGACTTC 57.403 33.333 0.00 0.00 33.14 3.01
2165 2495 5.049129 CACAGCTAAAGGTGGAGAAAGAAAG 60.049 44.000 13.29 0.00 46.90 2.62
2166 2496 4.821805 CACAGCTAAAGGTGGAGAAAGAAA 59.178 41.667 13.29 0.00 46.90 2.52
2167 2497 4.102524 TCACAGCTAAAGGTGGAGAAAGAA 59.897 41.667 13.29 0.00 46.90 2.52
2168 2498 3.646162 TCACAGCTAAAGGTGGAGAAAGA 59.354 43.478 13.29 0.02 46.90 2.52
2169 2499 4.008074 TCACAGCTAAAGGTGGAGAAAG 57.992 45.455 13.29 0.00 46.90 2.62
2193 2523 3.993081 CAGTACCAAGCAAAGAGAGTGAG 59.007 47.826 0.00 0.00 0.00 3.51
2198 2528 2.703536 TCCACAGTACCAAGCAAAGAGA 59.296 45.455 0.00 0.00 0.00 3.10
2361 2692 3.316308 GCCAAATCAGTTGCTACCCATAG 59.684 47.826 0.00 0.00 35.74 2.23
2362 2693 3.053693 AGCCAAATCAGTTGCTACCCATA 60.054 43.478 0.00 0.00 35.74 2.74
2363 2694 2.102578 GCCAAATCAGTTGCTACCCAT 58.897 47.619 0.00 0.00 35.74 4.00
2364 2695 1.075374 AGCCAAATCAGTTGCTACCCA 59.925 47.619 0.00 0.00 35.74 4.51
2365 2696 1.839424 AGCCAAATCAGTTGCTACCC 58.161 50.000 0.00 0.00 35.74 3.69
2377 2708 6.825610 TCATTTAAAAGGTCACAAGCCAAAT 58.174 32.000 0.00 0.00 0.00 2.32
2400 2731 9.608617 GGAACTGCTATTAACAAGTAAAAGTTC 57.391 33.333 0.00 0.00 39.21 3.01
2427 2758 8.352181 AGGGAGTATAATGAACATAGCCCTATA 58.648 37.037 0.00 0.00 40.24 1.31
2435 2766 6.971726 ACACGAGGGAGTATAATGAACATA 57.028 37.500 0.00 0.00 0.00 2.29
2443 2774 8.523915 TGTTAGAATAACACGAGGGAGTATAA 57.476 34.615 0.00 0.00 0.00 0.98
2454 2785 4.983215 TGTGCACTGTTAGAATAACACG 57.017 40.909 19.41 0.00 0.00 4.49
2529 2860 7.560796 ACATTCTCACTCTTATATAAGGGGG 57.439 40.000 23.34 20.53 38.56 5.40
2558 2889 7.430441 CCTGTTTTATCCCCATTTAAATACCG 58.570 38.462 0.00 0.00 0.00 4.02
2590 2921 9.415544 GAAAATAGAAGTTGTCTTGCAAATGAT 57.584 29.630 0.00 0.00 39.03 2.45
2609 2940 9.838339 ATACCATCCAGTTCTGTTAGAAAATAG 57.162 33.333 0.00 0.00 35.75 1.73
2632 2968 7.558444 TCAAATACCACCCCATTAACAGAATAC 59.442 37.037 0.00 0.00 0.00 1.89
2641 2977 7.560796 AAAATTGTCAAATACCACCCCATTA 57.439 32.000 0.00 0.00 0.00 1.90
2662 2998 4.080243 TGTCTGTGGACTAAGGGTGAAAAA 60.080 41.667 0.00 0.00 42.54 1.94
2691 3027 0.391130 GCAACCTAGATGTGTGCCGA 60.391 55.000 0.00 0.00 0.00 5.54
2703 3039 4.301072 AGAAGTAGGCAAATGCAACCTA 57.699 40.909 7.80 0.00 44.36 3.08
2815 3169 4.798907 AGATAACGTTGATTGACTACTGCG 59.201 41.667 11.99 0.00 0.00 5.18
2915 3273 6.577103 TGATTGATGACTTCTGATCCTGTAC 58.423 40.000 0.00 0.00 0.00 2.90
2979 3337 9.448438 GGTTGATTTTAGAAAATGCCCTTTTAT 57.552 29.630 4.98 0.00 38.64 1.40
3013 3371 0.816018 TTTGTGTACACTGGGGCACG 60.816 55.000 25.60 0.00 34.86 5.34
3019 3377 4.389374 AGAGTGGATTTTGTGTACACTGG 58.611 43.478 25.60 0.00 41.98 4.00
3025 3383 4.997395 GCTCAGAAGAGTGGATTTTGTGTA 59.003 41.667 0.00 0.00 44.00 2.90
3026 3384 3.817647 GCTCAGAAGAGTGGATTTTGTGT 59.182 43.478 0.00 0.00 44.00 3.72
3027 3385 3.190118 GGCTCAGAAGAGTGGATTTTGTG 59.810 47.826 0.00 0.00 44.00 3.33
3035 3393 1.197430 AGGTGGGCTCAGAAGAGTGG 61.197 60.000 0.00 0.00 44.00 4.00
3045 3403 1.919600 AATCTGCAGGAGGTGGGCTC 61.920 60.000 15.13 0.00 0.00 4.70
3055 3413 6.997655 TCAACCAGAGTATATAATCTGCAGG 58.002 40.000 27.21 19.23 44.49 4.85
3058 3416 9.149225 CATCTTCAACCAGAGTATATAATCTGC 57.851 37.037 27.21 0.00 44.49 4.26
3069 3427 7.936847 TGTATAAAACACATCTTCAACCAGAGT 59.063 33.333 0.00 0.00 31.43 3.24
3084 3442 8.126700 CCCGTGGATCTTATTTGTATAAAACAC 58.873 37.037 0.00 0.00 38.00 3.32
3094 3452 8.446599 AAATAACTACCCGTGGATCTTATTTG 57.553 34.615 0.00 0.00 0.00 2.32
3130 3488 6.969828 AACTGGTTTCACGAAATATCTCTC 57.030 37.500 0.00 0.00 32.36 3.20
3136 3494 9.048446 GGCTATTATAACTGGTTTCACGAAATA 57.952 33.333 0.00 0.00 32.36 1.40
3137 3495 7.554835 TGGCTATTATAACTGGTTTCACGAAAT 59.445 33.333 0.00 0.00 32.36 2.17
3183 3541 7.691993 ATTATAATACCAGACACAGGTCCTT 57.308 36.000 0.00 0.00 45.48 3.36
3215 3573 6.317893 CCGTATAACTTGGGAATGCTTAAGTT 59.682 38.462 4.02 10.81 43.48 2.66
3221 3579 3.926058 ACCGTATAACTTGGGAATGCT 57.074 42.857 0.00 0.00 0.00 3.79
3222 3580 4.196971 AGAACCGTATAACTTGGGAATGC 58.803 43.478 0.00 0.00 0.00 3.56
3223 3581 6.812998 TCTAGAACCGTATAACTTGGGAATG 58.187 40.000 0.00 0.00 0.00 2.67
3224 3582 7.427989 TTCTAGAACCGTATAACTTGGGAAT 57.572 36.000 0.00 0.00 0.00 3.01
3226 3584 6.855763 TTTCTAGAACCGTATAACTTGGGA 57.144 37.500 4.18 0.00 0.00 4.37
3229 3587 9.755064 CACAAATTTCTAGAACCGTATAACTTG 57.245 33.333 4.18 0.00 0.00 3.16
3230 3588 9.498176 ACACAAATTTCTAGAACCGTATAACTT 57.502 29.630 4.18 0.00 0.00 2.66
3231 3589 9.498176 AACACAAATTTCTAGAACCGTATAACT 57.502 29.630 4.18 0.00 0.00 2.24
3282 3640 7.661127 AGAAAAACTAAAACAACAAACCCAC 57.339 32.000 0.00 0.00 0.00 4.61
3309 3667 4.398319 ACAAACTCCCAACAGGAACTATG 58.602 43.478 0.00 0.00 46.94 2.23
3311 3669 4.513406 AACAAACTCCCAACAGGAACTA 57.487 40.909 0.00 0.00 46.94 2.24
3314 3672 6.800072 AAATAAACAAACTCCCAACAGGAA 57.200 33.333 0.00 0.00 46.94 3.36
3316 3674 7.722363 ACTAAAATAAACAAACTCCCAACAGG 58.278 34.615 0.00 0.00 0.00 4.00
3339 3697 8.919777 AGGTAATGCTTAGTGTAAGAAAAACT 57.080 30.769 0.00 0.00 38.02 2.66
3352 3711 9.355215 CCGTATAACTTGATAGGTAATGCTTAG 57.645 37.037 0.00 0.00 0.00 2.18
3422 3781 6.361481 GCGAGATAAACTAAAACAACAAACCC 59.639 38.462 0.00 0.00 0.00 4.11
3428 3787 9.474249 GAACTATGCGAGATAAACTAAAACAAC 57.526 33.333 0.00 0.00 0.00 3.32
3457 3816 4.320608 ACCAAATCAACAAACTCGCAAT 57.679 36.364 0.00 0.00 0.00 3.56
3461 3820 5.762045 AGATGAACCAAATCAACAAACTCG 58.238 37.500 0.00 0.00 32.06 4.18
3480 3839 5.931146 GGCAGTGGAGATCTAATGTAAGATG 59.069 44.000 0.00 0.00 36.33 2.90
3517 3876 8.520351 ACTTGTTTACTCAAAGTTAAAACTGCT 58.480 29.630 0.00 0.00 39.66 4.24
3521 3880 9.285770 CCTGACTTGTTTACTCAAAGTTAAAAC 57.714 33.333 0.00 0.00 30.96 2.43
3650 4010 9.248291 TCTTGCAGATTTTCTTTTCAAACATAC 57.752 29.630 0.00 0.00 0.00 2.39
3692 4052 9.332502 TGTTTACTGCTTAAAGAACATGTAAGA 57.667 29.630 9.08 0.00 29.89 2.10
3693 4053 9.382244 GTGTTTACTGCTTAAAGAACATGTAAG 57.618 33.333 0.00 0.00 29.89 2.34
3694 4054 8.894731 TGTGTTTACTGCTTAAAGAACATGTAA 58.105 29.630 0.00 0.00 29.89 2.41
3699 4059 7.497579 TCAGATGTGTTTACTGCTTAAAGAACA 59.502 33.333 0.00 8.21 34.34 3.18
3733 4104 6.153510 ACTGTTAGTGATGCTATGAAGTCTGA 59.846 38.462 0.00 0.00 0.00 3.27
3760 4131 6.648725 CACCTTCAAAAGAGACCAAACAAAAA 59.351 34.615 0.00 0.00 0.00 1.94
3765 4136 4.983671 ACACCTTCAAAAGAGACCAAAC 57.016 40.909 0.00 0.00 0.00 2.93
3769 4140 5.589050 ACTGTTTACACCTTCAAAAGAGACC 59.411 40.000 0.00 0.00 30.44 3.85
3770 4141 6.679327 ACTGTTTACACCTTCAAAAGAGAC 57.321 37.500 0.00 0.00 30.44 3.36
3772 4143 7.787725 AGTACTGTTTACACCTTCAAAAGAG 57.212 36.000 0.00 0.00 31.71 2.85
3855 4228 2.163818 TGTTTGACCTTCACTAGCGG 57.836 50.000 0.00 0.00 0.00 5.52
3858 4231 5.237344 CCTGAGTTTGTTTGACCTTCACTAG 59.763 44.000 0.00 0.00 0.00 2.57
3882 4255 8.882415 TGCTAACCTATAACTATGTACAAAGC 57.118 34.615 0.00 0.00 0.00 3.51
3936 4309 0.247460 CTTGCACATCTCCAGTCCGA 59.753 55.000 0.00 0.00 0.00 4.55
3955 4328 0.531200 AGTTCGAGGGGACGATTGTC 59.469 55.000 4.31 4.31 44.72 3.18
3956 4329 0.246635 CAGTTCGAGGGGACGATTGT 59.753 55.000 0.00 0.00 41.82 2.71
3959 4332 1.305046 ACCAGTTCGAGGGGACGAT 60.305 57.895 6.15 0.00 41.82 3.73
3960 4333 2.116772 ACCAGTTCGAGGGGACGA 59.883 61.111 6.15 0.00 40.55 4.20
3962 4335 1.004918 CACACCAGTTCGAGGGGAC 60.005 63.158 0.00 0.00 32.49 4.46
3963 4336 2.214216 CCACACCAGTTCGAGGGGA 61.214 63.158 0.00 0.00 32.49 4.81
3964 4337 2.052047 AACCACACCAGTTCGAGGGG 62.052 60.000 5.08 0.00 35.02 4.79
3968 4341 1.691976 AGATGAACCACACCAGTTCGA 59.308 47.619 0.00 0.00 45.33 3.71
3969 4342 1.800586 CAGATGAACCACACCAGTTCG 59.199 52.381 0.00 0.00 45.33 3.95
4005 4380 1.272490 TCTGACTACAGCAAACGAGGG 59.728 52.381 0.00 0.00 43.17 4.30
4062 4437 5.705441 TGTAAAACTGCTGATCTAACAAGGG 59.295 40.000 0.00 0.00 0.00 3.95
4066 4441 7.282224 ACAAAGTGTAAAACTGCTGATCTAACA 59.718 33.333 0.00 0.00 39.81 2.41
4067 4442 7.587757 CACAAAGTGTAAAACTGCTGATCTAAC 59.412 37.037 0.00 0.00 39.81 2.34
4179 4579 2.508867 CGGTCATCATCAAGCAAAACG 58.491 47.619 0.00 0.00 0.00 3.60
4183 4583 2.171237 AGATCCGGTCATCATCAAGCAA 59.829 45.455 0.00 0.00 0.00 3.91
4210 4612 4.516698 CCTTGCAATATACGGAAATCTGCT 59.483 41.667 0.00 0.00 0.00 4.24
4212 4614 4.516698 AGCCTTGCAATATACGGAAATCTG 59.483 41.667 0.00 0.00 0.00 2.90
4213 4615 4.516698 CAGCCTTGCAATATACGGAAATCT 59.483 41.667 0.00 0.00 0.00 2.40
4214 4616 4.275936 ACAGCCTTGCAATATACGGAAATC 59.724 41.667 0.00 0.00 0.00 2.17
4220 4622 3.198068 ACTCACAGCCTTGCAATATACG 58.802 45.455 0.00 0.00 0.00 3.06
4233 4635 1.266989 GCCCAAGTACAAACTCACAGC 59.733 52.381 0.00 0.00 33.75 4.40
4236 4638 2.949644 AGTTGCCCAAGTACAAACTCAC 59.050 45.455 0.00 0.00 33.75 3.51
4237 4639 2.948979 CAGTTGCCCAAGTACAAACTCA 59.051 45.455 0.00 0.00 33.75 3.41
4258 4660 4.671766 CGCCAATAGCTTCTAAACAACACC 60.672 45.833 0.00 0.00 40.39 4.16
4262 4664 4.069304 ACACGCCAATAGCTTCTAAACAA 58.931 39.130 0.00 0.00 40.39 2.83
4277 4679 0.109086 CACACAACCAAAACACGCCA 60.109 50.000 0.00 0.00 0.00 5.69
4309 4712 1.144057 CGTGTGCTGGATAGGGGAC 59.856 63.158 0.00 0.00 0.00 4.46
4327 4730 0.883833 CCACCATGGCTTCACAAGAC 59.116 55.000 13.04 0.00 36.92 3.01
4328 4731 0.478072 ACCACCATGGCTTCACAAGA 59.522 50.000 13.04 0.00 42.67 3.02
4329 4732 0.599558 CACCACCATGGCTTCACAAG 59.400 55.000 13.04 0.00 42.67 3.16
4330 4733 0.106268 ACACCACCATGGCTTCACAA 60.106 50.000 13.04 0.00 42.67 3.33
4331 4734 0.822944 CACACCACCATGGCTTCACA 60.823 55.000 13.04 0.00 42.67 3.58
4337 4740 2.415776 CAAAAATCACACCACCATGGC 58.584 47.619 13.04 0.00 42.67 4.40
4344 4747 1.115467 AACGGGCAAAAATCACACCA 58.885 45.000 0.00 0.00 0.00 4.17
4360 4763 1.083401 GCTCACGTGCTGTCAAACG 60.083 57.895 11.67 6.25 45.15 3.60
4367 4770 2.538333 GCTGAATAATGCTCACGTGCTG 60.538 50.000 11.67 7.36 0.00 4.41
4372 4775 1.003116 GCAGGCTGAATAATGCTCACG 60.003 52.381 20.86 0.00 35.78 4.35
4396 4804 0.375106 GCGAGCCAACTGAGTATTGC 59.625 55.000 0.00 0.00 0.00 3.56
4400 4808 1.506718 CTCGCGAGCCAACTGAGTA 59.493 57.895 25.07 0.00 0.00 2.59
4408 4816 3.411418 GATCGTTCCTCGCGAGCCA 62.411 63.158 30.49 16.04 41.83 4.75
4415 4824 1.124462 GCTGATTCGATCGTTCCTCG 58.876 55.000 15.94 6.33 41.41 4.63
4426 4835 2.975851 GCAAGTGAAAACTGCTGATTCG 59.024 45.455 0.00 0.00 0.00 3.34
4449 4858 2.168521 CCCTCTCTGCACCGAGAAAATA 59.831 50.000 7.06 0.00 39.40 1.40
4452 4861 1.544825 CCCCTCTCTGCACCGAGAAA 61.545 60.000 7.06 0.00 39.40 2.52
4457 4866 2.266055 GTTCCCCTCTCTGCACCG 59.734 66.667 0.00 0.00 0.00 4.94
4458 4867 2.266055 CGTTCCCCTCTCTGCACC 59.734 66.667 0.00 0.00 0.00 5.01
4459 4868 1.374758 CACGTTCCCCTCTCTGCAC 60.375 63.158 0.00 0.00 0.00 4.57
4460 4869 2.583441 CCACGTTCCCCTCTCTGCA 61.583 63.158 0.00 0.00 0.00 4.41
4461 4870 2.266055 CCACGTTCCCCTCTCTGC 59.734 66.667 0.00 0.00 0.00 4.26
4486 4895 0.953471 CATGTCCCCGCTCGAACAAA 60.953 55.000 0.00 0.00 0.00 2.83
4488 4897 2.264480 CATGTCCCCGCTCGAACA 59.736 61.111 0.00 0.00 0.00 3.18
4509 4918 2.375766 GGAGACGTGTGCAAGCTCG 61.376 63.158 0.00 0.00 0.00 5.03
4524 4933 2.162681 ACTCCTGCCAATTTTTCGGAG 58.837 47.619 0.00 0.00 42.78 4.63
4528 4937 4.321974 CCCTGTTACTCCTGCCAATTTTTC 60.322 45.833 0.00 0.00 0.00 2.29
4534 4943 0.690762 GACCCTGTTACTCCTGCCAA 59.309 55.000 0.00 0.00 0.00 4.52
4548 4957 0.959372 AATCGACGAGACGTGACCCT 60.959 55.000 3.01 0.00 41.37 4.34
4549 4958 0.797249 CAATCGACGAGACGTGACCC 60.797 60.000 3.01 0.00 41.37 4.46
4565 4974 3.421844 GGGATAAATAAGGCGAGGCAAT 58.578 45.455 0.00 0.00 0.00 3.56
4582 4991 1.693640 CAGTGAGCCAAAGGGGGAT 59.306 57.895 0.00 0.00 37.04 3.85
4583 4992 3.170362 CAGTGAGCCAAAGGGGGA 58.830 61.111 0.00 0.00 37.04 4.81
4584 4993 2.677875 GCAGTGAGCCAAAGGGGG 60.678 66.667 0.00 0.00 37.23 5.40
4594 5003 4.366684 GGGGGTTGGGGCAGTGAG 62.367 72.222 0.00 0.00 0.00 3.51
4604 5013 4.694987 AATGGGTGGCGGGGGTTG 62.695 66.667 0.00 0.00 0.00 3.77
4605 5014 3.897681 GAAATGGGTGGCGGGGGTT 62.898 63.158 0.00 0.00 0.00 4.11
4606 5015 4.376170 GAAATGGGTGGCGGGGGT 62.376 66.667 0.00 0.00 0.00 4.95
4607 5016 3.677480 ATGAAATGGGTGGCGGGGG 62.677 63.158 0.00 0.00 0.00 5.40
4608 5017 2.043046 ATGAAATGGGTGGCGGGG 60.043 61.111 0.00 0.00 0.00 5.73
4609 5018 2.127232 GGATGAAATGGGTGGCGGG 61.127 63.158 0.00 0.00 0.00 6.13
4610 5019 2.127232 GGGATGAAATGGGTGGCGG 61.127 63.158 0.00 0.00 0.00 6.13
4611 5020 0.684153 AAGGGATGAAATGGGTGGCG 60.684 55.000 0.00 0.00 0.00 5.69
4612 5021 1.114627 GAAGGGATGAAATGGGTGGC 58.885 55.000 0.00 0.00 0.00 5.01
4613 5022 2.530460 TGAAGGGATGAAATGGGTGG 57.470 50.000 0.00 0.00 0.00 4.61
4614 5023 2.167075 GCTTGAAGGGATGAAATGGGTG 59.833 50.000 0.00 0.00 0.00 4.61
4615 5024 2.043526 AGCTTGAAGGGATGAAATGGGT 59.956 45.455 0.00 0.00 0.00 4.51
4616 5025 2.692041 GAGCTTGAAGGGATGAAATGGG 59.308 50.000 0.00 0.00 0.00 4.00
4617 5026 3.629087 AGAGCTTGAAGGGATGAAATGG 58.371 45.455 0.00 0.00 0.00 3.16
4618 5027 4.097589 GGAAGAGCTTGAAGGGATGAAATG 59.902 45.833 0.00 0.00 0.00 2.32
4619 5028 4.017683 AGGAAGAGCTTGAAGGGATGAAAT 60.018 41.667 0.00 0.00 0.00 2.17
4620 5029 3.331889 AGGAAGAGCTTGAAGGGATGAAA 59.668 43.478 0.00 0.00 0.00 2.69
4621 5030 2.915604 AGGAAGAGCTTGAAGGGATGAA 59.084 45.455 0.00 0.00 0.00 2.57
4622 5031 2.503356 GAGGAAGAGCTTGAAGGGATGA 59.497 50.000 0.00 0.00 0.00 2.92
4623 5032 2.421248 GGAGGAAGAGCTTGAAGGGATG 60.421 54.545 0.00 0.00 0.00 3.51
4624 5033 1.843206 GGAGGAAGAGCTTGAAGGGAT 59.157 52.381 0.00 0.00 0.00 3.85
4625 5034 1.280457 GGAGGAAGAGCTTGAAGGGA 58.720 55.000 0.00 0.00 0.00 4.20
4626 5035 0.254462 GGGAGGAAGAGCTTGAAGGG 59.746 60.000 0.00 0.00 0.00 3.95
4627 5036 0.107945 CGGGAGGAAGAGCTTGAAGG 60.108 60.000 0.00 0.00 0.00 3.46
4628 5037 3.450028 CGGGAGGAAGAGCTTGAAG 57.550 57.895 0.00 0.00 0.00 3.02
4641 5050 2.633488 GATGAAGAAACTTCCCGGGAG 58.367 52.381 25.26 19.73 0.00 4.30
4642 5051 1.066430 CGATGAAGAAACTTCCCGGGA 60.066 52.381 22.63 22.63 0.00 5.14
4643 5052 1.066430 TCGATGAAGAAACTTCCCGGG 60.066 52.381 16.85 16.85 0.00 5.73
4644 5053 2.000447 GTCGATGAAGAAACTTCCCGG 59.000 52.381 16.51 0.00 0.00 5.73
4645 5054 1.654105 CGTCGATGAAGAAACTTCCCG 59.346 52.381 0.00 11.21 0.00 5.14
4646 5055 2.924290 CTCGTCGATGAAGAAACTTCCC 59.076 50.000 8.98 1.46 0.00 3.97
4647 5056 2.345942 GCTCGTCGATGAAGAAACTTCC 59.654 50.000 8.98 0.00 0.00 3.46
4648 5057 2.987149 TGCTCGTCGATGAAGAAACTTC 59.013 45.455 8.98 0.00 0.00 3.01
4649 5058 3.026630 TGCTCGTCGATGAAGAAACTT 57.973 42.857 8.98 0.00 0.00 2.66
4650 5059 2.724977 TGCTCGTCGATGAAGAAACT 57.275 45.000 8.98 0.00 0.00 2.66
4651 5060 2.035342 CGATGCTCGTCGATGAAGAAAC 60.035 50.000 8.98 0.00 44.06 2.78
4652 5061 2.185262 CGATGCTCGTCGATGAAGAAA 58.815 47.619 8.98 0.00 44.06 2.52
4653 5062 1.827578 CGATGCTCGTCGATGAAGAA 58.172 50.000 8.98 0.00 44.06 2.52
4654 5063 0.592500 GCGATGCTCGTCGATGAAGA 60.593 55.000 14.85 0.00 44.06 2.87
4655 5064 1.543941 GGCGATGCTCGTCGATGAAG 61.544 60.000 14.85 4.46 44.06 3.02
4656 5065 1.588932 GGCGATGCTCGTCGATGAA 60.589 57.895 14.85 0.00 44.06 2.57
4657 5066 2.026157 GGCGATGCTCGTCGATGA 59.974 61.111 14.85 7.21 44.06 2.92
4662 5071 0.249238 AGAAGATGGCGATGCTCGTC 60.249 55.000 3.65 3.65 46.01 4.20
4663 5072 0.249238 GAGAAGATGGCGATGCTCGT 60.249 55.000 7.27 0.00 42.81 4.18
4664 5073 0.943359 GGAGAAGATGGCGATGCTCG 60.943 60.000 0.00 1.80 43.89 5.03
4665 5074 0.602372 GGGAGAAGATGGCGATGCTC 60.602 60.000 0.00 0.00 0.00 4.26
4666 5075 1.449353 GGGAGAAGATGGCGATGCT 59.551 57.895 0.00 0.00 0.00 3.79
4667 5076 1.958205 CGGGAGAAGATGGCGATGC 60.958 63.158 0.00 0.00 0.00 3.91
4668 5077 1.301244 CCGGGAGAAGATGGCGATG 60.301 63.158 0.00 0.00 0.00 3.84
4669 5078 2.511452 CCCGGGAGAAGATGGCGAT 61.511 63.158 18.48 0.00 0.00 4.58
4670 5079 3.154473 CCCGGGAGAAGATGGCGA 61.154 66.667 18.48 0.00 0.00 5.54
4671 5080 2.650813 CTTCCCGGGAGAAGATGGCG 62.651 65.000 25.26 1.14 45.08 5.69
4672 5081 1.147153 CTTCCCGGGAGAAGATGGC 59.853 63.158 25.26 0.00 45.08 4.40
4673 5082 0.912486 AACTTCCCGGGAGAAGATGG 59.088 55.000 25.96 12.95 45.08 3.51
4674 5083 2.237392 AGAAACTTCCCGGGAGAAGATG 59.763 50.000 25.96 14.53 45.08 2.90
4675 5084 2.552367 AGAAACTTCCCGGGAGAAGAT 58.448 47.619 25.96 13.57 45.08 2.40
4676 5085 2.025636 AGAAACTTCCCGGGAGAAGA 57.974 50.000 25.96 10.74 45.08 2.87
4678 5087 2.051692 TGAAGAAACTTCCCGGGAGAA 58.948 47.619 25.26 9.33 0.00 2.87
4679 5088 1.724545 TGAAGAAACTTCCCGGGAGA 58.275 50.000 25.26 13.92 0.00 3.71
4680 5089 2.633488 GATGAAGAAACTTCCCGGGAG 58.367 52.381 25.26 19.73 0.00 4.30
4681 5090 1.066430 CGATGAAGAAACTTCCCGGGA 60.066 52.381 22.63 22.63 0.00 5.14
4682 5091 1.066430 TCGATGAAGAAACTTCCCGGG 60.066 52.381 16.85 16.85 0.00 5.73
4683 5092 2.000447 GTCGATGAAGAAACTTCCCGG 59.000 52.381 16.51 0.00 0.00 5.73
4684 5093 1.654105 CGTCGATGAAGAAACTTCCCG 59.346 52.381 0.00 11.21 0.00 5.14
4685 5094 2.924290 CTCGTCGATGAAGAAACTTCCC 59.076 50.000 8.98 1.46 0.00 3.97
4686 5095 2.345942 GCTCGTCGATGAAGAAACTTCC 59.654 50.000 8.98 0.00 0.00 3.46
4687 5096 2.987149 TGCTCGTCGATGAAGAAACTTC 59.013 45.455 8.98 0.00 0.00 3.01
4688 5097 3.026630 TGCTCGTCGATGAAGAAACTT 57.973 42.857 8.98 0.00 0.00 2.66
4689 5098 2.724977 TGCTCGTCGATGAAGAAACT 57.275 45.000 8.98 0.00 0.00 2.66
4690 5099 2.035342 CGATGCTCGTCGATGAAGAAAC 60.035 50.000 8.98 0.00 44.06 2.78
4691 5100 2.185262 CGATGCTCGTCGATGAAGAAA 58.815 47.619 8.98 0.00 44.06 2.52
4692 5101 1.827578 CGATGCTCGTCGATGAAGAA 58.172 50.000 8.98 0.00 44.06 2.52
4693 5102 0.592500 GCGATGCTCGTCGATGAAGA 60.593 55.000 14.85 0.00 44.06 2.87
4694 5103 1.543941 GGCGATGCTCGTCGATGAAG 61.544 60.000 14.85 4.46 44.06 3.02
4695 5104 1.588932 GGCGATGCTCGTCGATGAA 60.589 57.895 14.85 0.00 44.06 2.57
4696 5105 2.026157 GGCGATGCTCGTCGATGA 59.974 61.111 14.85 7.21 44.06 2.92
4701 5110 0.249238 AGAAGATGGCGATGCTCGTC 60.249 55.000 3.65 3.65 46.01 4.20
4702 5111 0.249238 GAGAAGATGGCGATGCTCGT 60.249 55.000 7.27 0.00 42.81 4.18
4703 5112 0.943359 GGAGAAGATGGCGATGCTCG 60.943 60.000 0.00 1.80 43.89 5.03
4704 5113 0.943359 CGGAGAAGATGGCGATGCTC 60.943 60.000 0.00 0.00 0.00 4.26
4705 5114 1.068753 CGGAGAAGATGGCGATGCT 59.931 57.895 0.00 0.00 0.00 3.79
4706 5115 1.958205 CCGGAGAAGATGGCGATGC 60.958 63.158 0.00 0.00 0.00 3.91
4707 5116 0.179073 AACCGGAGAAGATGGCGATG 60.179 55.000 9.46 0.00 0.00 3.84
4708 5117 0.541863 AAACCGGAGAAGATGGCGAT 59.458 50.000 9.46 0.00 0.00 4.58
4709 5118 0.391130 CAAACCGGAGAAGATGGCGA 60.391 55.000 9.46 0.00 0.00 5.54
4710 5119 1.982073 GCAAACCGGAGAAGATGGCG 61.982 60.000 9.46 0.00 0.00 5.69
4711 5120 1.803289 GCAAACCGGAGAAGATGGC 59.197 57.895 9.46 0.00 0.00 4.40
4712 5121 2.089854 CGCAAACCGGAGAAGATGG 58.910 57.895 9.46 0.00 0.00 3.51
4722 5131 4.160635 GATCGCCACCGCAAACCG 62.161 66.667 0.00 0.00 34.03 4.44
4723 5132 3.810896 GGATCGCCACCGCAAACC 61.811 66.667 0.00 0.00 34.03 3.27
4724 5133 2.253414 GAAGGATCGCCACCGCAAAC 62.253 60.000 0.00 0.00 36.29 2.93
4725 5134 2.033448 AAGGATCGCCACCGCAAA 59.967 55.556 0.00 0.00 36.29 3.68
4726 5135 2.435938 GAAGGATCGCCACCGCAA 60.436 61.111 0.00 0.00 36.29 4.85
4727 5136 2.852495 GAAGAAGGATCGCCACCGCA 62.852 60.000 0.00 0.00 36.29 5.69
4728 5137 2.125106 AAGAAGGATCGCCACCGC 60.125 61.111 0.00 0.00 36.29 5.68
4729 5138 1.521681 GGAAGAAGGATCGCCACCG 60.522 63.158 0.00 0.00 36.29 4.94
4730 5139 0.179070 GAGGAAGAAGGATCGCCACC 60.179 60.000 0.00 0.00 36.29 4.61
4731 5140 0.179070 GGAGGAAGAAGGATCGCCAC 60.179 60.000 0.00 0.00 36.29 5.01
4732 5141 0.325671 AGGAGGAAGAAGGATCGCCA 60.326 55.000 0.00 0.00 36.29 5.69
4733 5142 0.391228 GAGGAGGAAGAAGGATCGCC 59.609 60.000 0.00 0.00 0.00 5.54
4734 5143 0.391228 GGAGGAGGAAGAAGGATCGC 59.609 60.000 0.00 0.00 0.00 4.58
4735 5144 1.960689 GAGGAGGAGGAAGAAGGATCG 59.039 57.143 0.00 0.00 0.00 3.69
4736 5145 3.230976 GAGAGGAGGAGGAAGAAGGATC 58.769 54.545 0.00 0.00 0.00 3.36
4737 5146 2.090775 GGAGAGGAGGAGGAAGAAGGAT 60.091 54.545 0.00 0.00 0.00 3.24
4738 5147 1.289530 GGAGAGGAGGAGGAAGAAGGA 59.710 57.143 0.00 0.00 0.00 3.36
4739 5148 1.290732 AGGAGAGGAGGAGGAAGAAGG 59.709 57.143 0.00 0.00 0.00 3.46
4740 5149 2.666317 GAGGAGAGGAGGAGGAAGAAG 58.334 57.143 0.00 0.00 0.00 2.85
4753 5219 1.113788 CAGAGGAGCAAGGAGGAGAG 58.886 60.000 0.00 0.00 0.00 3.20
4807 5291 7.282901 ACAACATCATGTGTAGCATATTAAGCA 59.717 33.333 0.00 0.00 41.14 3.91
4822 5306 2.224281 ACGTCCTCACACAACATCATGT 60.224 45.455 0.00 0.00 0.00 3.21
4823 5307 2.158254 CACGTCCTCACACAACATCATG 59.842 50.000 0.00 0.00 0.00 3.07
4824 5308 2.416747 CACGTCCTCACACAACATCAT 58.583 47.619 0.00 0.00 0.00 2.45
4825 5309 1.540146 CCACGTCCTCACACAACATCA 60.540 52.381 0.00 0.00 0.00 3.07
4826 5310 1.148310 CCACGTCCTCACACAACATC 58.852 55.000 0.00 0.00 0.00 3.06
4827 5311 0.468226 ACCACGTCCTCACACAACAT 59.532 50.000 0.00 0.00 0.00 2.71
4828 5312 1.067974 CTACCACGTCCTCACACAACA 59.932 52.381 0.00 0.00 0.00 3.33
4829 5313 1.338973 TCTACCACGTCCTCACACAAC 59.661 52.381 0.00 0.00 0.00 3.32
4830 5314 1.694844 TCTACCACGTCCTCACACAA 58.305 50.000 0.00 0.00 0.00 3.33
4831 5315 1.816835 GATCTACCACGTCCTCACACA 59.183 52.381 0.00 0.00 0.00 3.72
4832 5316 1.816835 TGATCTACCACGTCCTCACAC 59.183 52.381 0.00 0.00 0.00 3.82
4833 5317 2.209690 TGATCTACCACGTCCTCACA 57.790 50.000 0.00 0.00 0.00 3.58
4834 5318 5.706369 AGTATATGATCTACCACGTCCTCAC 59.294 44.000 0.00 0.00 0.00 3.51
4835 5319 5.877491 AGTATATGATCTACCACGTCCTCA 58.123 41.667 0.00 0.00 0.00 3.86
4836 5320 7.104939 ACTAGTATATGATCTACCACGTCCTC 58.895 42.308 0.00 0.00 0.00 3.71
4837 5321 7.018487 ACTAGTATATGATCTACCACGTCCT 57.982 40.000 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.