Multiple sequence alignment - TraesCS5D01G229500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G229500 chr5D 100.000 6879 0 0 1 6879 336456273 336449395 0.000000e+00 12704.0
1 TraesCS5D01G229500 chr5D 81.905 315 22 15 2760 3060 552315789 552315496 4.150000e-57 233.0
2 TraesCS5D01G229500 chr5D 91.111 45 4 0 2758 2802 200901938 200901894 2.070000e-05 62.1
3 TraesCS5D01G229500 chr5A 94.053 3077 145 10 1562 4607 437930544 437927475 0.000000e+00 4634.0
4 TraesCS5D01G229500 chr5A 94.547 1082 36 9 4700 5762 437927471 437926394 0.000000e+00 1650.0
5 TraesCS5D01G229500 chr5A 93.110 987 51 5 1639 2608 437928358 437929344 0.000000e+00 1430.0
6 TraesCS5D01G229500 chr5A 91.591 987 61 8 2751 3723 437929489 437930467 0.000000e+00 1343.0
7 TraesCS5D01G229500 chr5A 93.387 741 28 5 757 1482 437931275 437930541 0.000000e+00 1077.0
8 TraesCS5D01G229500 chr5A 90.158 569 34 4 5761 6310 437926300 437925735 0.000000e+00 721.0
9 TraesCS5D01G229500 chr5A 90.766 444 36 4 6433 6874 437925647 437925207 7.690000e-164 588.0
10 TraesCS5D01G229500 chr5A 81.818 726 98 19 44 749 666052613 666051902 4.630000e-161 579.0
11 TraesCS5D01G229500 chr5A 91.129 124 11 0 4220 4343 366216963 366216840 1.190000e-37 169.0
12 TraesCS5D01G229500 chr5B 95.243 2144 57 8 4003 6124 394756401 394754281 0.000000e+00 3352.0
13 TraesCS5D01G229500 chr5B 93.939 660 25 3 6221 6879 394754282 394753637 0.000000e+00 983.0
14 TraesCS5D01G229500 chr5B 93.037 675 33 5 819 1480 394758871 394758198 0.000000e+00 974.0
15 TraesCS5D01G229500 chr5B 96.552 290 10 0 3717 4006 394756769 394756480 1.340000e-131 481.0
16 TraesCS5D01G229500 chr5B 84.938 405 45 7 3717 4110 394755749 394755350 5.000000e-106 396.0
17 TraesCS5D01G229500 chr5B 85.876 354 39 9 4607 4956 394756834 394756488 3.920000e-97 366.0
18 TraesCS5D01G229500 chr5B 92.208 77 3 1 1568 1644 394756838 394756765 9.440000e-19 106.0
19 TraesCS5D01G229500 chr5B 91.892 74 3 1 1569 1642 394755817 394755747 4.390000e-17 100.0
20 TraesCS5D01G229500 chr2B 91.443 970 73 5 1641 2602 310941274 310940307 0.000000e+00 1323.0
21 TraesCS5D01G229500 chr2B 89.620 973 68 11 2758 3713 310934888 310935844 0.000000e+00 1206.0
22 TraesCS5D01G229500 chr2B 85.891 971 112 20 1638 2596 759167453 759168410 0.000000e+00 1011.0
23 TraesCS5D01G229500 chr2B 77.935 775 131 25 1 753 763373066 763373822 1.360000e-121 448.0
24 TraesCS5D01G229500 chr2B 97.849 93 2 0 1479 1571 715721819 715721727 1.990000e-35 161.0
25 TraesCS5D01G229500 chr1B 90.279 967 73 8 2764 3714 211317006 211317967 0.000000e+00 1245.0
26 TraesCS5D01G229500 chr1B 96.809 94 3 0 1479 1572 654313575 654313668 2.570000e-34 158.0
27 TraesCS5D01G229500 chr1B 97.059 34 1 0 6316 6349 510227653 510227620 2.680000e-04 58.4
28 TraesCS5D01G229500 chrUn 89.003 973 77 14 2764 3713 114975710 114974745 0.000000e+00 1177.0
29 TraesCS5D01G229500 chrUn 96.732 153 3 1 2606 2756 354743708 354743556 3.180000e-63 254.0
30 TraesCS5D01G229500 chrUn 96.732 153 3 1 2606 2756 430358487 430358639 3.180000e-63 254.0
31 TraesCS5D01G229500 chrUn 97.727 88 2 0 1479 1566 132121148 132121235 1.190000e-32 152.0
32 TraesCS5D01G229500 chrUn 97.701 87 2 0 1479 1565 27475955 27476041 4.300000e-32 150.0
33 TraesCS5D01G229500 chrUn 95.745 94 3 1 1478 1570 27602651 27602558 4.300000e-32 150.0
34 TraesCS5D01G229500 chrUn 95.652 92 4 0 1479 1570 9840453 9840362 1.550000e-31 148.0
35 TraesCS5D01G229500 chrUn 95.652 92 4 0 1479 1570 42198685 42198776 1.550000e-31 148.0
36 TraesCS5D01G229500 chrUn 97.647 85 2 0 1479 1563 2693314 2693230 5.560000e-31 147.0
37 TraesCS5D01G229500 chrUn 93.814 97 6 0 1476 1572 316200536 316200632 5.560000e-31 147.0
38 TraesCS5D01G229500 chrUn 97.647 85 2 0 1479 1563 369753260 369753176 5.560000e-31 147.0
39 TraesCS5D01G229500 chrUn 96.591 88 3 0 1476 1563 459259781 459259694 5.560000e-31 147.0
40 TraesCS5D01G229500 chrUn 95.556 90 4 0 1477 1566 55725051 55724962 2.000000e-30 145.0
41 TraesCS5D01G229500 chrUn 94.624 93 5 0 1476 1568 274220447 274220539 2.000000e-30 145.0
42 TraesCS5D01G229500 chrUn 94.624 93 5 0 1476 1568 274228217 274228309 2.000000e-30 145.0
43 TraesCS5D01G229500 chrUn 94.624 93 5 0 1476 1568 291459053 291458961 2.000000e-30 145.0
44 TraesCS5D01G229500 chr6D 88.650 978 77 15 2758 3714 293799332 293800296 0.000000e+00 1160.0
45 TraesCS5D01G229500 chr6D 91.525 118 10 0 4220 4337 219787213 219787330 5.520000e-36 163.0
46 TraesCS5D01G229500 chr6D 90.323 124 10 2 4220 4342 137159895 137159773 1.990000e-35 161.0
47 TraesCS5D01G229500 chr6D 98.864 88 1 0 1476 1563 104147593 104147680 2.570000e-34 158.0
48 TraesCS5D01G229500 chr6D 98.864 88 1 0 1479 1566 221219400 221219313 2.570000e-34 158.0
49 TraesCS5D01G229500 chr6D 97.778 90 2 0 1478 1567 380781869 380781780 9.240000e-34 156.0
50 TraesCS5D01G229500 chr6D 97.753 89 2 0 1478 1566 468902041 468901953 3.320000e-33 154.0
51 TraesCS5D01G229500 chr6D 88.800 125 12 1 4220 4342 249454700 249454576 1.190000e-32 152.0
52 TraesCS5D01G229500 chr6D 95.745 94 4 0 1475 1568 462231752 462231845 1.190000e-32 152.0
53 TraesCS5D01G229500 chr6D 95.789 95 3 1 1476 1569 464673699 464673605 1.190000e-32 152.0
54 TraesCS5D01G229500 chr6D 94.792 96 3 2 1477 1571 4701319 4701413 1.550000e-31 148.0
55 TraesCS5D01G229500 chr6D 88.333 120 14 0 4220 4339 445729894 445730013 2.000000e-30 145.0
56 TraesCS5D01G229500 chr6D 86.441 118 16 0 4226 4343 423000531 423000648 5.600000e-26 130.0
57 TraesCS5D01G229500 chr1D 88.545 969 86 11 2764 3714 172059101 172060062 0.000000e+00 1151.0
58 TraesCS5D01G229500 chr1D 87.193 976 93 24 1638 2600 361315191 361314235 0.000000e+00 1081.0
59 TraesCS5D01G229500 chr1D 90.323 124 12 0 4220 4343 277359853 277359730 5.520000e-36 163.0
60 TraesCS5D01G229500 chr1D 100.000 85 0 0 1479 1563 436604058 436603974 2.570000e-34 158.0
61 TraesCS5D01G229500 chr1D 95.833 96 4 0 1476 1571 467803597 467803502 9.240000e-34 156.0
62 TraesCS5D01G229500 chr1D 91.743 109 8 1 1479 1586 296532009 296532117 4.300000e-32 150.0
63 TraesCS5D01G229500 chr3D 88.374 972 83 16 2760 3713 589772215 589773174 0.000000e+00 1142.0
64 TraesCS5D01G229500 chr3D 87.566 378 24 13 2758 3115 99871623 99871997 3.840000e-112 416.0
65 TraesCS5D01G229500 chr3D 96.732 153 3 1 2606 2756 589253064 589252912 3.180000e-63 254.0
66 TraesCS5D01G229500 chr3D 91.129 124 11 0 4220 4343 422517861 422517984 1.190000e-37 169.0
67 TraesCS5D01G229500 chr3D 98.925 93 1 0 1475 1567 153849500 153849592 4.270000e-37 167.0
68 TraesCS5D01G229500 chr3D 89.516 124 13 0 4220 4343 497902791 497902668 2.570000e-34 158.0
69 TraesCS5D01G229500 chr3D 93.939 99 5 1 1479 1576 12275232 12275330 1.550000e-31 148.0
70 TraesCS5D01G229500 chr4D 88.037 978 85 18 2760 3713 76563702 76564671 0.000000e+00 1129.0
71 TraesCS5D01G229500 chr4D 88.083 965 91 16 1645 2600 32371098 32372047 0.000000e+00 1123.0
72 TraesCS5D01G229500 chr4D 86.592 977 103 24 1638 2600 28863513 28862551 0.000000e+00 1053.0
73 TraesCS5D01G229500 chr4D 86.489 977 104 24 1638 2600 28858054 28857092 0.000000e+00 1048.0
74 TraesCS5D01G229500 chr4D 79.556 450 76 11 220 666 475123113 475123549 2.410000e-79 307.0
75 TraesCS5D01G229500 chr4D 96.732 153 3 1 2606 2756 354587344 354587496 3.180000e-63 254.0
76 TraesCS5D01G229500 chr4D 78.906 384 64 9 290 669 52771277 52770907 1.920000e-60 244.0
77 TraesCS5D01G229500 chr4D 91.129 124 11 0 4220 4343 23322846 23322723 1.190000e-37 169.0
78 TraesCS5D01G229500 chr4D 91.129 124 11 0 4220 4343 469604584 469604707 1.190000e-37 169.0
79 TraesCS5D01G229500 chr4D 96.739 92 3 0 1479 1570 447129597 447129506 3.320000e-33 154.0
80 TraesCS5D01G229500 chr4D 88.710 124 14 0 4220 4343 32017200 32017323 1.190000e-32 152.0
81 TraesCS5D01G229500 chr4D 95.699 93 4 0 1474 1566 80976631 80976539 4.300000e-32 150.0
82 TraesCS5D01G229500 chr4D 90.000 110 11 0 4234 4343 423599068 423598959 7.190000e-30 143.0
83 TraesCS5D01G229500 chr3A 87.487 959 100 12 1645 2596 738297557 738296612 0.000000e+00 1088.0
84 TraesCS5D01G229500 chr3A 76.913 784 138 28 3 763 432144129 432144892 8.310000e-109 405.0
85 TraesCS5D01G229500 chr3A 76.637 779 130 26 1 763 660201328 660200586 3.890000e-102 383.0
86 TraesCS5D01G229500 chr3A 90.411 73 6 1 6319 6391 341294527 341294456 2.040000e-15 95.3
87 TraesCS5D01G229500 chr2D 87.474 958 102 11 1645 2595 45172641 45173587 0.000000e+00 1088.0
88 TraesCS5D01G229500 chr4B 87.435 963 88 18 1644 2596 457421532 457422471 0.000000e+00 1077.0
89 TraesCS5D01G229500 chr4B 79.279 444 78 12 220 660 599815585 599816017 1.450000e-76 298.0
90 TraesCS5D01G229500 chr4B 96.732 153 3 1 2606 2756 151526039 151526191 3.180000e-63 254.0
91 TraesCS5D01G229500 chr4B 96.732 153 3 1 2606 2756 151526551 151526703 3.180000e-63 254.0
92 TraesCS5D01G229500 chr4B 96.732 153 3 1 2606 2756 151526953 151527105 3.180000e-63 254.0
93 TraesCS5D01G229500 chr4B 95.918 98 2 1 1479 1574 624748557 624748460 2.570000e-34 158.0
94 TraesCS5D01G229500 chr4B 96.774 93 3 0 1478 1570 24565244 24565336 9.240000e-34 156.0
95 TraesCS5D01G229500 chr4B 96.739 92 3 0 1479 1570 621960 622051 3.320000e-33 154.0
96 TraesCS5D01G229500 chr4B 88.800 125 12 2 4223 4346 446336150 446336273 1.190000e-32 152.0
97 TraesCS5D01G229500 chr6A 78.926 745 113 24 16 753 256546860 256546153 3.760000e-127 466.0
98 TraesCS5D01G229500 chr6A 96.907 97 3 0 1476 1572 542602785 542602881 5.520000e-36 163.0
99 TraesCS5D01G229500 chr6A 98.876 89 1 0 1477 1565 354476039 354475951 7.140000e-35 159.0
100 TraesCS5D01G229500 chr6A 98.864 88 1 0 1479 1566 262052134 262052047 2.570000e-34 158.0
101 TraesCS5D01G229500 chr4A 76.380 779 132 30 1 762 549169528 549170271 8.430000e-99 372.0
102 TraesCS5D01G229500 chr4A 80.556 216 40 2 542 756 728820737 728820951 1.530000e-36 165.0
103 TraesCS5D01G229500 chr4A 98.901 91 1 0 1475 1565 661959785 661959875 5.520000e-36 163.0
104 TraesCS5D01G229500 chr7D 96.732 153 3 1 2606 2756 204018056 204018208 3.180000e-63 254.0
105 TraesCS5D01G229500 chr7D 97.849 93 2 0 1479 1571 85908471 85908379 1.990000e-35 161.0
106 TraesCS5D01G229500 chr7D 98.876 89 1 0 1478 1566 611865503 611865415 7.140000e-35 159.0
107 TraesCS5D01G229500 chr7D 95.918 98 3 1 1476 1572 136013310 136013407 2.570000e-34 158.0
108 TraesCS5D01G229500 chr7A 92.857 126 9 0 4220 4345 538361759 538361884 4.240000e-42 183.0
109 TraesCS5D01G229500 chr7A 96.907 97 3 0 1477 1573 579199458 579199554 5.520000e-36 163.0
110 TraesCS5D01G229500 chr3B 91.129 124 11 0 4220 4343 327869150 327869027 1.190000e-37 169.0
111 TraesCS5D01G229500 chr3B 91.129 124 11 0 4220 4343 550641622 550641745 1.190000e-37 169.0
112 TraesCS5D01G229500 chr3B 92.208 77 5 1 6315 6391 22056110 22056035 2.620000e-19 108.0
113 TraesCS5D01G229500 chr1A 91.129 124 11 0 4220 4343 350014435 350014312 1.190000e-37 169.0
114 TraesCS5D01G229500 chr1A 97.826 92 1 1 1479 1569 86242699 86242790 2.570000e-34 158.0
115 TraesCS5D01G229500 chr1A 95.699 93 3 1 1471 1563 28616322 28616413 1.550000e-31 148.0
116 TraesCS5D01G229500 chr6B 92.308 117 9 0 4221 4337 331039719 331039835 4.270000e-37 167.0
117 TraesCS5D01G229500 chr6B 91.057 123 11 0 4220 4342 337237281 337237159 4.270000e-37 167.0
118 TraesCS5D01G229500 chr6B 97.895 95 2 0 1471 1565 171735015 171735109 1.530000e-36 165.0
119 TraesCS5D01G229500 chr7B 96.875 96 3 0 1475 1570 483787827 483787732 1.990000e-35 161.0
120 TraesCS5D01G229500 chr2A 94.175 103 5 1 1473 1574 69222494 69222596 9.240000e-34 156.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G229500 chr5D 336449395 336456273 6878 True 12704.00 12704 100.000000 1 6879 1 chr5D.!!$R2 6878
1 TraesCS5D01G229500 chr5A 437925207 437931275 6068 True 1734.00 4634 92.582200 757 6874 5 chr5A.!!$R3 6117
2 TraesCS5D01G229500 chr5A 437928358 437930467 2109 False 1386.50 1430 92.350500 1639 3723 2 chr5A.!!$F1 2084
3 TraesCS5D01G229500 chr5A 666051902 666052613 711 True 579.00 579 81.818000 44 749 1 chr5A.!!$R2 705
4 TraesCS5D01G229500 chr5B 394753637 394758871 5234 True 844.75 3352 91.710625 819 6879 8 chr5B.!!$R1 6060
5 TraesCS5D01G229500 chr2B 310940307 310941274 967 True 1323.00 1323 91.443000 1641 2602 1 chr2B.!!$R1 961
6 TraesCS5D01G229500 chr2B 310934888 310935844 956 False 1206.00 1206 89.620000 2758 3713 1 chr2B.!!$F1 955
7 TraesCS5D01G229500 chr2B 759167453 759168410 957 False 1011.00 1011 85.891000 1638 2596 1 chr2B.!!$F2 958
8 TraesCS5D01G229500 chr2B 763373066 763373822 756 False 448.00 448 77.935000 1 753 1 chr2B.!!$F3 752
9 TraesCS5D01G229500 chr1B 211317006 211317967 961 False 1245.00 1245 90.279000 2764 3714 1 chr1B.!!$F1 950
10 TraesCS5D01G229500 chrUn 114974745 114975710 965 True 1177.00 1177 89.003000 2764 3713 1 chrUn.!!$R5 949
11 TraesCS5D01G229500 chr6D 293799332 293800296 964 False 1160.00 1160 88.650000 2758 3714 1 chr6D.!!$F4 956
12 TraesCS5D01G229500 chr1D 172059101 172060062 961 False 1151.00 1151 88.545000 2764 3714 1 chr1D.!!$F1 950
13 TraesCS5D01G229500 chr1D 361314235 361315191 956 True 1081.00 1081 87.193000 1638 2600 1 chr1D.!!$R2 962
14 TraesCS5D01G229500 chr3D 589772215 589773174 959 False 1142.00 1142 88.374000 2760 3713 1 chr3D.!!$F5 953
15 TraesCS5D01G229500 chr4D 76563702 76564671 969 False 1129.00 1129 88.037000 2760 3713 1 chr4D.!!$F3 953
16 TraesCS5D01G229500 chr4D 32371098 32372047 949 False 1123.00 1123 88.083000 1645 2600 1 chr4D.!!$F2 955
17 TraesCS5D01G229500 chr4D 28862551 28863513 962 True 1053.00 1053 86.592000 1638 2600 1 chr4D.!!$R3 962
18 TraesCS5D01G229500 chr4D 28857092 28858054 962 True 1048.00 1048 86.489000 1638 2600 1 chr4D.!!$R2 962
19 TraesCS5D01G229500 chr3A 738296612 738297557 945 True 1088.00 1088 87.487000 1645 2596 1 chr3A.!!$R3 951
20 TraesCS5D01G229500 chr3A 432144129 432144892 763 False 405.00 405 76.913000 3 763 1 chr3A.!!$F1 760
21 TraesCS5D01G229500 chr3A 660200586 660201328 742 True 383.00 383 76.637000 1 763 1 chr3A.!!$R2 762
22 TraesCS5D01G229500 chr2D 45172641 45173587 946 False 1088.00 1088 87.474000 1645 2595 1 chr2D.!!$F1 950
23 TraesCS5D01G229500 chr4B 457421532 457422471 939 False 1077.00 1077 87.435000 1644 2596 1 chr4B.!!$F4 952
24 TraesCS5D01G229500 chr4B 151526039 151527105 1066 False 254.00 254 96.732000 2606 2756 3 chr4B.!!$F6 150
25 TraesCS5D01G229500 chr6A 256546153 256546860 707 True 466.00 466 78.926000 16 753 1 chr6A.!!$R1 737
26 TraesCS5D01G229500 chr4A 549169528 549170271 743 False 372.00 372 76.380000 1 762 1 chr4A.!!$F1 761

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
243 263 0.033011 AGAGAGGTGGTATGGCGTCT 60.033 55.000 0.00 0.0 33.26 4.18 F
393 413 0.034767 CTCATGGTCATGCAGGGTGT 60.035 55.000 0.00 0.0 38.65 4.16 F
976 1028 0.041982 GTCTCAACCCCTCTCCCTCT 59.958 60.000 0.00 0.0 0.00 3.69 F
977 1029 0.336737 TCTCAACCCCTCTCCCTCTC 59.663 60.000 0.00 0.0 0.00 3.20 F
1484 1536 0.391793 GCACCTCTGCAACTACTCCC 60.392 60.000 0.00 0.0 43.62 4.30 F
2672 4075 1.137479 AGACTTGGGAAAACGTCGACA 59.863 47.619 17.16 0.0 0.00 4.35 F
4236 6276 0.034896 ACGGTTCGAGTCCTGCAAAT 59.965 50.000 7.05 0.0 0.00 2.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2149 3505 0.179089 GATCACATCTGCTCCACGCT 60.179 55.000 0.00 0.0 40.11 5.07 R
2319 3684 1.463056 TGCGCCTATTTTTGACAGTCG 59.537 47.619 4.18 0.0 0.00 4.18 R
2334 3700 1.884926 GAGCTCACACCTATGCGCC 60.885 63.158 9.40 0.0 0.00 6.53 R
2412 3788 2.125512 GCGCACTCCTCCGTCAAT 60.126 61.111 0.30 0.0 0.00 2.57 R
3051 4912 0.953471 CGTCTCAAATCGTGGCCCAA 60.953 55.000 0.00 0.0 0.00 4.12 R
4295 6335 1.065410 TTGGGCAGGGTCCAGAGAAA 61.065 55.000 0.00 0.0 39.05 2.52 R
6091 8267 0.246086 AGCTCTGCTTCGGAGAACAG 59.754 55.000 0.00 0.0 45.90 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 1.271871 CCAATTGCTACCCACCTGTGA 60.272 52.381 0.00 0.00 0.00 3.58
46 47 0.762842 TGCTACCCACCTGTGACTGT 60.763 55.000 0.00 0.00 0.00 3.55
49 50 2.236395 GCTACCCACCTGTGACTGTTAT 59.764 50.000 0.00 0.00 0.00 1.89
68 69 0.109532 TTGGGGTTGCGTCATTCTCA 59.890 50.000 0.00 0.00 0.00 3.27
120 121 2.415010 CTCCTCTGCATCGTCCGG 59.585 66.667 0.00 0.00 0.00 5.14
145 146 2.102925 CAGCAACAATTCCCCACTTGTT 59.897 45.455 0.00 0.00 44.23 2.83
160 161 0.817229 TTGTTGTCATGCTCGTGCCA 60.817 50.000 7.05 0.00 38.71 4.92
162 163 0.110056 GTTGTCATGCTCGTGCCAAG 60.110 55.000 7.05 0.00 38.71 3.61
177 179 1.723608 CCAAGCAACAACCTGCACGA 61.724 55.000 0.00 0.00 45.18 4.35
179 181 2.047151 AAGCAACAACCTGCACGACG 62.047 55.000 0.00 0.00 45.18 5.12
186 188 2.505777 CCTGCACGACGAGCTCTG 60.506 66.667 17.92 8.06 0.00 3.35
187 189 2.563427 CTGCACGACGAGCTCTGA 59.437 61.111 17.92 0.00 0.00 3.27
190 192 2.487428 CACGACGAGCTCTGAGGG 59.513 66.667 12.85 0.00 0.00 4.30
194 196 1.027255 CGACGAGCTCTGAGGGAAGA 61.027 60.000 12.85 0.00 0.00 2.87
199 201 2.729194 GAGCTCTGAGGGAAGAGTGTA 58.271 52.381 6.43 0.00 44.71 2.90
204 206 0.790993 TGAGGGAAGAGTGTAGGGGT 59.209 55.000 0.00 0.00 0.00 4.95
207 209 3.181404 TGAGGGAAGAGTGTAGGGGTAAA 60.181 47.826 0.00 0.00 0.00 2.01
211 213 3.836562 GGAAGAGTGTAGGGGTAAAGACA 59.163 47.826 0.00 0.00 0.00 3.41
214 216 5.422214 AGAGTGTAGGGGTAAAGACAATG 57.578 43.478 0.00 0.00 0.00 2.82
234 254 2.042297 TGTCATGAGAGAGAGAGGTGGT 59.958 50.000 0.00 0.00 0.00 4.16
242 262 0.386113 GAGAGAGGTGGTATGGCGTC 59.614 60.000 0.00 0.00 0.00 5.19
243 263 0.033011 AGAGAGGTGGTATGGCGTCT 60.033 55.000 0.00 0.00 33.26 4.18
252 272 0.600255 GTATGGCGTCTTCCATCCCG 60.600 60.000 0.00 0.00 43.00 5.14
295 315 4.225340 CGCGTCGTCGAGGGAGAG 62.225 72.222 16.03 0.00 39.71 3.20
296 316 3.878519 GCGTCGTCGAGGGAGAGG 61.879 72.222 16.03 0.93 39.71 3.69
297 317 3.203412 CGTCGTCGAGGGAGAGGG 61.203 72.222 7.05 0.00 39.71 4.30
298 318 2.271497 GTCGTCGAGGGAGAGGGA 59.729 66.667 5.12 0.00 0.00 4.20
299 319 1.152922 GTCGTCGAGGGAGAGGGAT 60.153 63.158 5.12 0.00 0.00 3.85
300 320 1.152943 TCGTCGAGGGAGAGGGATG 60.153 63.158 5.12 0.00 0.00 3.51
301 321 1.454111 CGTCGAGGGAGAGGGATGT 60.454 63.158 0.00 0.00 0.00 3.06
302 322 1.448922 CGTCGAGGGAGAGGGATGTC 61.449 65.000 0.00 0.00 0.00 3.06
303 323 0.395862 GTCGAGGGAGAGGGATGTCA 60.396 60.000 0.00 0.00 0.00 3.58
304 324 0.558220 TCGAGGGAGAGGGATGTCAT 59.442 55.000 0.00 0.00 0.00 3.06
305 325 0.965439 CGAGGGAGAGGGATGTCATC 59.035 60.000 4.06 4.06 0.00 2.92
315 335 1.893544 GGATGTCATCCTCCATGCTG 58.106 55.000 22.64 0.00 46.19 4.41
316 336 1.419012 GGATGTCATCCTCCATGCTGA 59.581 52.381 22.64 0.00 46.19 4.26
317 337 2.492012 GATGTCATCCTCCATGCTGAC 58.508 52.381 0.90 0.00 38.74 3.51
318 338 1.576577 TGTCATCCTCCATGCTGACT 58.423 50.000 0.00 0.00 38.98 3.41
319 339 1.208776 TGTCATCCTCCATGCTGACTG 59.791 52.381 0.00 0.00 38.98 3.51
320 340 0.835276 TCATCCTCCATGCTGACTGG 59.165 55.000 0.00 0.00 34.93 4.00
321 341 0.835276 CATCCTCCATGCTGACTGGA 59.165 55.000 0.00 0.00 40.49 3.86
322 342 1.420514 CATCCTCCATGCTGACTGGAT 59.579 52.381 0.00 0.00 41.83 3.41
323 343 1.126488 TCCTCCATGCTGACTGGATC 58.874 55.000 0.00 0.00 41.83 3.36
324 344 0.249784 CCTCCATGCTGACTGGATCG 60.250 60.000 0.00 0.00 41.83 3.69
325 345 0.249784 CTCCATGCTGACTGGATCGG 60.250 60.000 0.00 0.00 41.83 4.18
326 346 1.227764 CCATGCTGACTGGATCGGG 60.228 63.158 0.00 0.00 35.70 5.14
327 347 1.227764 CATGCTGACTGGATCGGGG 60.228 63.158 0.00 0.00 33.81 5.73
328 348 1.690633 ATGCTGACTGGATCGGGGT 60.691 57.895 0.00 0.00 33.81 4.95
329 349 1.690219 ATGCTGACTGGATCGGGGTC 61.690 60.000 4.94 4.94 33.81 4.46
330 350 2.060980 GCTGACTGGATCGGGGTCT 61.061 63.158 10.93 0.00 33.81 3.85
331 351 2.022240 GCTGACTGGATCGGGGTCTC 62.022 65.000 10.93 2.67 33.81 3.36
332 352 1.381327 TGACTGGATCGGGGTCTCC 60.381 63.158 10.93 0.00 0.00 3.71
333 353 1.075896 GACTGGATCGGGGTCTCCT 60.076 63.158 0.00 0.00 32.47 3.69
334 354 1.075896 ACTGGATCGGGGTCTCCTC 60.076 63.158 0.00 0.00 32.47 3.71
335 355 2.123854 TGGATCGGGGTCTCCTCG 60.124 66.667 1.23 1.23 32.47 4.63
336 356 2.913060 GGATCGGGGTCTCCTCGG 60.913 72.222 8.22 0.00 0.00 4.63
337 357 3.607661 GATCGGGGTCTCCTCGGC 61.608 72.222 8.22 0.00 0.00 5.54
356 376 3.972276 GCCGCGCCAAACCTTTCA 61.972 61.111 0.00 0.00 0.00 2.69
357 377 2.255252 CCGCGCCAAACCTTTCAG 59.745 61.111 0.00 0.00 0.00 3.02
358 378 2.429069 CGCGCCAAACCTTTCAGC 60.429 61.111 0.00 0.00 0.00 4.26
362 382 1.581447 GCCAAACCTTTCAGCGAGG 59.419 57.895 0.00 0.00 40.24 4.63
363 383 1.581447 CCAAACCTTTCAGCGAGGC 59.419 57.895 0.00 0.00 37.84 4.70
364 384 0.890996 CCAAACCTTTCAGCGAGGCT 60.891 55.000 0.00 0.00 40.77 4.58
373 393 3.465403 AGCGAGGCTGCCCTGTAG 61.465 66.667 16.57 3.59 43.12 2.74
375 395 3.465403 CGAGGCTGCCCTGTAGCT 61.465 66.667 16.57 0.00 43.12 3.32
376 396 2.503546 GAGGCTGCCCTGTAGCTC 59.496 66.667 16.57 0.00 43.12 4.09
377 397 2.284921 AGGCTGCCCTGTAGCTCA 60.285 61.111 16.57 0.00 40.94 4.26
378 398 1.692042 AGGCTGCCCTGTAGCTCAT 60.692 57.895 16.57 0.00 40.94 2.90
379 399 1.525535 GGCTGCCCTGTAGCTCATG 60.526 63.158 7.66 0.00 40.93 3.07
380 400 1.525535 GCTGCCCTGTAGCTCATGG 60.526 63.158 0.00 0.00 38.22 3.66
381 401 1.910722 CTGCCCTGTAGCTCATGGT 59.089 57.895 0.00 0.00 34.88 3.55
382 402 0.179062 CTGCCCTGTAGCTCATGGTC 60.179 60.000 0.00 0.00 34.88 4.02
383 403 0.909133 TGCCCTGTAGCTCATGGTCA 60.909 55.000 0.00 0.00 34.88 4.02
384 404 0.471617 GCCCTGTAGCTCATGGTCAT 59.528 55.000 0.00 0.00 34.88 3.06
385 405 1.813092 GCCCTGTAGCTCATGGTCATG 60.813 57.143 4.67 4.67 40.09 3.07
386 406 1.590932 CCTGTAGCTCATGGTCATGC 58.409 55.000 6.10 0.00 38.65 4.06
387 407 1.134310 CCTGTAGCTCATGGTCATGCA 60.134 52.381 6.10 0.00 38.65 3.96
388 408 2.210961 CTGTAGCTCATGGTCATGCAG 58.789 52.381 6.10 4.17 38.65 4.41
389 409 1.134310 TGTAGCTCATGGTCATGCAGG 60.134 52.381 6.10 0.00 38.65 4.85
390 410 0.471191 TAGCTCATGGTCATGCAGGG 59.529 55.000 0.00 0.00 38.65 4.45
391 411 1.077212 GCTCATGGTCATGCAGGGT 60.077 57.895 0.00 0.00 38.65 4.34
392 412 1.381928 GCTCATGGTCATGCAGGGTG 61.382 60.000 0.00 0.00 38.65 4.61
393 413 0.034767 CTCATGGTCATGCAGGGTGT 60.035 55.000 0.00 0.00 38.65 4.16
394 414 0.405198 TCATGGTCATGCAGGGTGTT 59.595 50.000 0.00 0.00 38.65 3.32
395 415 0.528924 CATGGTCATGCAGGGTGTTG 59.471 55.000 0.00 0.00 31.39 3.33
396 416 0.612732 ATGGTCATGCAGGGTGTTGG 60.613 55.000 0.00 0.00 0.00 3.77
397 417 1.978617 GGTCATGCAGGGTGTTGGG 60.979 63.158 0.00 0.00 0.00 4.12
398 418 2.283101 TCATGCAGGGTGTTGGGC 60.283 61.111 0.00 0.00 0.00 5.36
399 419 3.751246 CATGCAGGGTGTTGGGCG 61.751 66.667 0.00 0.00 0.00 6.13
400 420 4.284550 ATGCAGGGTGTTGGGCGT 62.285 61.111 0.00 0.00 0.00 5.68
404 424 4.954970 AGGGTGTTGGGCGTGCAG 62.955 66.667 0.00 0.00 0.00 4.41
407 427 3.216292 GTGTTGGGCGTGCAGGTT 61.216 61.111 8.40 0.00 0.00 3.50
408 428 3.215568 TGTTGGGCGTGCAGGTTG 61.216 61.111 8.40 0.00 0.00 3.77
409 429 4.645921 GTTGGGCGTGCAGGTTGC 62.646 66.667 8.40 0.00 45.29 4.17
418 438 4.400410 GCAGGTTGCAACACACAC 57.600 55.556 29.55 12.81 44.26 3.82
419 439 1.809207 GCAGGTTGCAACACACACT 59.191 52.632 29.55 14.89 44.26 3.55
420 440 0.526096 GCAGGTTGCAACACACACTG 60.526 55.000 29.55 24.95 44.26 3.66
421 441 0.810648 CAGGTTGCAACACACACTGT 59.189 50.000 29.55 2.00 31.02 3.55
443 463 4.727235 GCTATGGAAGCGTATAAACCAC 57.273 45.455 0.00 0.00 42.53 4.16
444 464 4.377897 GCTATGGAAGCGTATAAACCACT 58.622 43.478 0.00 0.00 42.53 4.00
445 465 4.814771 GCTATGGAAGCGTATAAACCACTT 59.185 41.667 0.00 0.00 42.53 3.16
446 466 5.296035 GCTATGGAAGCGTATAAACCACTTT 59.704 40.000 0.00 0.00 42.53 2.66
447 467 6.183360 GCTATGGAAGCGTATAAACCACTTTT 60.183 38.462 0.00 0.00 42.53 2.27
448 468 5.365403 TGGAAGCGTATAAACCACTTTTG 57.635 39.130 0.00 0.00 0.00 2.44
461 481 4.993029 CCACTTTTGGGAAGTAAACACA 57.007 40.909 0.00 0.00 39.57 3.72
462 482 4.932146 CCACTTTTGGGAAGTAAACACAG 58.068 43.478 0.00 0.00 39.57 3.66
463 483 4.642885 CCACTTTTGGGAAGTAAACACAGA 59.357 41.667 0.00 0.00 39.57 3.41
464 484 5.301805 CCACTTTTGGGAAGTAAACACAGAT 59.698 40.000 0.00 0.00 39.57 2.90
465 485 6.488683 CCACTTTTGGGAAGTAAACACAGATA 59.511 38.462 0.00 0.00 39.57 1.98
466 486 7.013846 CCACTTTTGGGAAGTAAACACAGATAA 59.986 37.037 0.00 0.00 39.57 1.75
467 487 8.410141 CACTTTTGGGAAGTAAACACAGATAAA 58.590 33.333 0.00 0.00 0.00 1.40
468 488 8.630037 ACTTTTGGGAAGTAAACACAGATAAAG 58.370 33.333 0.00 0.00 0.00 1.85
469 489 7.519032 TTTGGGAAGTAAACACAGATAAAGG 57.481 36.000 0.00 0.00 0.00 3.11
470 490 5.566469 TGGGAAGTAAACACAGATAAAGGG 58.434 41.667 0.00 0.00 0.00 3.95
471 491 4.398358 GGGAAGTAAACACAGATAAAGGGC 59.602 45.833 0.00 0.00 0.00 5.19
472 492 5.254115 GGAAGTAAACACAGATAAAGGGCT 58.746 41.667 0.00 0.00 0.00 5.19
473 493 5.354513 GGAAGTAAACACAGATAAAGGGCTC 59.645 44.000 0.00 0.00 0.00 4.70
474 494 5.499004 AGTAAACACAGATAAAGGGCTCA 57.501 39.130 0.00 0.00 0.00 4.26
475 495 6.067217 AGTAAACACAGATAAAGGGCTCAT 57.933 37.500 0.00 0.00 0.00 2.90
476 496 6.485171 AGTAAACACAGATAAAGGGCTCATT 58.515 36.000 0.00 0.00 0.00 2.57
477 497 6.948309 AGTAAACACAGATAAAGGGCTCATTT 59.052 34.615 0.00 0.00 0.00 2.32
478 498 5.649782 AACACAGATAAAGGGCTCATTTG 57.350 39.130 0.00 0.00 0.00 2.32
479 499 4.922206 ACACAGATAAAGGGCTCATTTGA 58.078 39.130 0.00 0.00 0.00 2.69
480 500 5.324409 ACACAGATAAAGGGCTCATTTGAA 58.676 37.500 0.00 0.00 0.00 2.69
481 501 5.774690 ACACAGATAAAGGGCTCATTTGAAA 59.225 36.000 0.00 0.00 0.00 2.69
482 502 6.267471 ACACAGATAAAGGGCTCATTTGAAAA 59.733 34.615 0.00 0.00 0.00 2.29
483 503 6.587608 CACAGATAAAGGGCTCATTTGAAAAC 59.412 38.462 0.00 0.00 0.00 2.43
484 504 6.267471 ACAGATAAAGGGCTCATTTGAAAACA 59.733 34.615 0.00 0.00 0.00 2.83
485 505 7.153985 CAGATAAAGGGCTCATTTGAAAACAA 58.846 34.615 0.00 0.00 0.00 2.83
486 506 7.656948 CAGATAAAGGGCTCATTTGAAAACAAA 59.343 33.333 0.00 0.00 0.00 2.83
487 507 8.210265 AGATAAAGGGCTCATTTGAAAACAAAA 58.790 29.630 0.00 0.00 0.00 2.44
488 508 8.744568 ATAAAGGGCTCATTTGAAAACAAAAA 57.255 26.923 0.00 0.00 0.00 1.94
489 509 7.643569 AAAGGGCTCATTTGAAAACAAAAAT 57.356 28.000 0.00 0.00 0.00 1.82
490 510 6.622833 AGGGCTCATTTGAAAACAAAAATG 57.377 33.333 0.00 2.46 42.53 2.32
491 511 5.008911 AGGGCTCATTTGAAAACAAAAATGC 59.991 36.000 0.00 0.00 41.47 3.56
492 512 5.221009 GGGCTCATTTGAAAACAAAAATGCA 60.221 36.000 0.00 0.00 41.47 3.96
493 513 5.910723 GGCTCATTTGAAAACAAAAATGCAG 59.089 36.000 0.00 4.25 41.47 4.41
494 514 5.397240 GCTCATTTGAAAACAAAAATGCAGC 59.603 36.000 0.00 12.37 41.47 5.25
495 515 6.432607 TCATTTGAAAACAAAAATGCAGCA 57.567 29.167 0.00 0.00 41.47 4.41
496 516 7.028926 TCATTTGAAAACAAAAATGCAGCAT 57.971 28.000 0.52 0.52 41.47 3.79
497 517 8.151141 TCATTTGAAAACAAAAATGCAGCATA 57.849 26.923 8.75 0.00 41.47 3.14
498 518 8.283992 TCATTTGAAAACAAAAATGCAGCATAG 58.716 29.630 8.75 1.99 41.47 2.23
499 519 7.783090 TTTGAAAACAAAAATGCAGCATAGA 57.217 28.000 8.75 0.00 0.00 1.98
500 520 7.966246 TTGAAAACAAAAATGCAGCATAGAT 57.034 28.000 8.75 0.00 0.00 1.98
501 521 7.354025 TGAAAACAAAAATGCAGCATAGATG 57.646 32.000 8.75 10.15 0.00 2.90
520 540 1.876322 GCTGGACATGCTAGCTTAGG 58.124 55.000 17.23 0.04 46.55 2.69
521 541 1.414181 GCTGGACATGCTAGCTTAGGA 59.586 52.381 17.23 0.00 46.55 2.94
522 542 2.804933 GCTGGACATGCTAGCTTAGGAC 60.805 54.545 17.23 0.00 46.55 3.85
523 543 2.697751 CTGGACATGCTAGCTTAGGACT 59.302 50.000 17.23 0.00 0.00 3.85
524 544 3.107601 TGGACATGCTAGCTTAGGACTT 58.892 45.455 17.23 0.00 0.00 3.01
525 545 3.118629 TGGACATGCTAGCTTAGGACTTG 60.119 47.826 17.23 3.59 0.00 3.16
526 546 3.133003 GGACATGCTAGCTTAGGACTTGA 59.867 47.826 17.23 0.00 0.00 3.02
527 547 4.367450 GACATGCTAGCTTAGGACTTGAG 58.633 47.826 17.23 0.00 0.00 3.02
528 548 4.026744 ACATGCTAGCTTAGGACTTGAGA 58.973 43.478 17.23 0.00 0.00 3.27
529 549 4.653341 ACATGCTAGCTTAGGACTTGAGAT 59.347 41.667 17.23 0.00 0.00 2.75
530 550 4.662468 TGCTAGCTTAGGACTTGAGATG 57.338 45.455 17.23 0.00 0.00 2.90
531 551 4.281657 TGCTAGCTTAGGACTTGAGATGA 58.718 43.478 17.23 0.00 0.00 2.92
532 552 4.711846 TGCTAGCTTAGGACTTGAGATGAA 59.288 41.667 17.23 0.00 0.00 2.57
533 553 5.047188 GCTAGCTTAGGACTTGAGATGAAC 58.953 45.833 7.70 0.00 0.00 3.18
534 554 5.394663 GCTAGCTTAGGACTTGAGATGAACA 60.395 44.000 7.70 0.00 0.00 3.18
535 555 5.489792 AGCTTAGGACTTGAGATGAACAA 57.510 39.130 0.00 0.00 0.00 2.83
536 556 5.869579 AGCTTAGGACTTGAGATGAACAAA 58.130 37.500 0.00 0.00 0.00 2.83
537 557 5.703130 AGCTTAGGACTTGAGATGAACAAAC 59.297 40.000 0.00 0.00 0.00 2.93
538 558 5.703130 GCTTAGGACTTGAGATGAACAAACT 59.297 40.000 0.00 0.00 0.00 2.66
539 559 6.205658 GCTTAGGACTTGAGATGAACAAACTT 59.794 38.462 0.00 0.00 0.00 2.66
540 560 7.387948 GCTTAGGACTTGAGATGAACAAACTTA 59.612 37.037 0.00 0.00 0.00 2.24
541 561 9.273016 CTTAGGACTTGAGATGAACAAACTTAA 57.727 33.333 0.00 0.00 0.00 1.85
542 562 9.793259 TTAGGACTTGAGATGAACAAACTTAAT 57.207 29.630 0.00 0.00 0.00 1.40
543 563 8.697507 AGGACTTGAGATGAACAAACTTAATT 57.302 30.769 0.00 0.00 0.00 1.40
544 564 9.793259 AGGACTTGAGATGAACAAACTTAATTA 57.207 29.630 0.00 0.00 0.00 1.40
570 590 7.606132 TTTTGCGATTCAAAATTGCATTTTC 57.394 28.000 13.78 0.00 46.44 2.29
571 591 4.943927 TGCGATTCAAAATTGCATTTTCG 58.056 34.783 9.92 7.35 40.27 3.46
572 592 4.683320 TGCGATTCAAAATTGCATTTTCGA 59.317 33.333 13.59 4.11 40.27 3.71
573 593 5.176406 TGCGATTCAAAATTGCATTTTCGAA 59.824 32.000 9.24 9.24 40.27 3.71
574 594 6.128607 TGCGATTCAAAATTGCATTTTCGAAT 60.129 30.769 16.26 16.26 40.27 3.34
575 595 6.737750 GCGATTCAAAATTGCATTTTCGAATT 59.262 30.769 17.00 5.88 40.27 2.17
576 596 7.268872 GCGATTCAAAATTGCATTTTCGAATTT 59.731 29.630 17.00 3.70 40.27 1.82
577 597 9.738405 CGATTCAAAATTGCATTTTCGAATTTA 57.262 25.926 17.00 0.00 40.27 1.40
588 608 9.554724 TGCATTTTCGAATTTATAAGACTGAAC 57.445 29.630 0.00 0.00 0.00 3.18
589 609 9.774742 GCATTTTCGAATTTATAAGACTGAACT 57.225 29.630 0.00 0.00 0.00 3.01
593 613 9.483916 TTTCGAATTTATAAGACTGAACTGACA 57.516 29.630 0.00 0.00 0.00 3.58
594 614 8.462143 TCGAATTTATAAGACTGAACTGACAC 57.538 34.615 0.00 0.00 0.00 3.67
595 615 8.085909 TCGAATTTATAAGACTGAACTGACACA 58.914 33.333 0.00 0.00 0.00 3.72
596 616 8.162880 CGAATTTATAAGACTGAACTGACACAC 58.837 37.037 0.00 0.00 0.00 3.82
597 617 7.907214 ATTTATAAGACTGAACTGACACACC 57.093 36.000 0.00 0.00 0.00 4.16
598 618 6.665992 TTATAAGACTGAACTGACACACCT 57.334 37.500 0.00 0.00 0.00 4.00
599 619 3.914426 AAGACTGAACTGACACACCTT 57.086 42.857 0.00 0.00 0.00 3.50
600 620 3.460857 AGACTGAACTGACACACCTTC 57.539 47.619 0.00 0.00 0.00 3.46
601 621 2.766263 AGACTGAACTGACACACCTTCA 59.234 45.455 0.00 0.00 0.00 3.02
602 622 3.197766 AGACTGAACTGACACACCTTCAA 59.802 43.478 0.00 0.00 0.00 2.69
603 623 4.130118 GACTGAACTGACACACCTTCAAT 58.870 43.478 0.00 0.00 0.00 2.57
604 624 5.070446 AGACTGAACTGACACACCTTCAATA 59.930 40.000 0.00 0.00 0.00 1.90
605 625 5.300752 ACTGAACTGACACACCTTCAATAG 58.699 41.667 0.00 0.00 0.00 1.73
606 626 5.163301 ACTGAACTGACACACCTTCAATAGT 60.163 40.000 0.00 0.00 0.00 2.12
607 627 5.680619 TGAACTGACACACCTTCAATAGTT 58.319 37.500 0.00 0.00 0.00 2.24
608 628 6.119536 TGAACTGACACACCTTCAATAGTTT 58.880 36.000 0.00 0.00 0.00 2.66
609 629 6.601613 TGAACTGACACACCTTCAATAGTTTT 59.398 34.615 0.00 0.00 0.00 2.43
610 630 6.377327 ACTGACACACCTTCAATAGTTTTG 57.623 37.500 0.00 0.00 0.00 2.44
611 631 5.299279 ACTGACACACCTTCAATAGTTTTGG 59.701 40.000 0.00 0.00 0.00 3.28
612 632 4.582656 TGACACACCTTCAATAGTTTTGGG 59.417 41.667 0.00 0.00 0.00 4.12
613 633 4.798882 ACACACCTTCAATAGTTTTGGGA 58.201 39.130 0.00 0.00 0.00 4.37
614 634 5.393866 ACACACCTTCAATAGTTTTGGGAT 58.606 37.500 0.00 0.00 0.00 3.85
615 635 5.838521 ACACACCTTCAATAGTTTTGGGATT 59.161 36.000 0.00 0.00 0.00 3.01
616 636 6.015434 ACACACCTTCAATAGTTTTGGGATTC 60.015 38.462 0.00 0.00 0.00 2.52
617 637 6.015519 CACACCTTCAATAGTTTTGGGATTCA 60.016 38.462 0.00 0.00 0.00 2.57
618 638 6.553100 ACACCTTCAATAGTTTTGGGATTCAA 59.447 34.615 0.00 0.00 0.00 2.69
619 639 7.070571 ACACCTTCAATAGTTTTGGGATTCAAA 59.929 33.333 0.00 0.00 42.98 2.69
627 647 4.751767 TTTTGGGATTCAAAACTGCACT 57.248 36.364 0.44 0.00 46.73 4.40
628 648 4.751767 TTTGGGATTCAAAACTGCACTT 57.248 36.364 0.00 0.00 41.87 3.16
629 649 4.751767 TTGGGATTCAAAACTGCACTTT 57.248 36.364 0.00 0.00 31.46 2.66
630 650 4.751767 TGGGATTCAAAACTGCACTTTT 57.248 36.364 0.00 0.00 0.00 2.27
631 651 5.096443 TGGGATTCAAAACTGCACTTTTT 57.904 34.783 1.79 0.00 0.00 1.94
632 652 6.227298 TGGGATTCAAAACTGCACTTTTTA 57.773 33.333 1.79 0.00 0.00 1.52
633 653 6.644347 TGGGATTCAAAACTGCACTTTTTAA 58.356 32.000 1.79 1.98 0.00 1.52
634 654 7.106239 TGGGATTCAAAACTGCACTTTTTAAA 58.894 30.769 1.79 1.52 0.00 1.52
635 655 7.279758 TGGGATTCAAAACTGCACTTTTTAAAG 59.720 33.333 1.79 0.80 41.73 1.85
637 657 8.664798 GGATTCAAAACTGCACTTTTTAAAGTT 58.335 29.630 5.16 0.00 46.52 2.66
673 693 9.739276 AACTGATACACCTTCAATAATTCTTGA 57.261 29.630 2.34 2.34 33.42 3.02
674 694 9.739276 ACTGATACACCTTCAATAATTCTTGAA 57.261 29.630 15.70 15.70 41.56 2.69
675 695 9.994432 CTGATACACCTTCAATAATTCTTGAAC 57.006 33.333 13.33 4.96 39.55 3.18
676 696 9.513906 TGATACACCTTCAATAATTCTTGAACA 57.486 29.630 13.33 7.02 39.55 3.18
680 700 9.883142 ACACCTTCAATAATTCTTGAACAAAAA 57.117 25.926 13.33 0.00 39.55 1.94
684 704 9.853921 CTTCAATAATTCTTGAACAAAAACTGC 57.146 29.630 13.33 0.00 39.55 4.40
685 705 8.939201 TCAATAATTCTTGAACAAAAACTGCA 57.061 26.923 3.93 0.00 32.35 4.41
686 706 9.033481 TCAATAATTCTTGAACAAAAACTGCAG 57.967 29.630 13.48 13.48 32.35 4.41
687 707 8.819974 CAATAATTCTTGAACAAAAACTGCAGT 58.180 29.630 15.25 15.25 0.00 4.40
688 708 8.947055 ATAATTCTTGAACAAAAACTGCAGTT 57.053 26.923 26.36 26.36 40.50 3.16
689 709 6.651755 ATTCTTGAACAAAAACTGCAGTTG 57.348 33.333 31.73 22.42 38.44 3.16
690 710 5.132897 TCTTGAACAAAAACTGCAGTTGT 57.867 34.783 31.73 24.63 38.44 3.32
691 711 6.260870 TCTTGAACAAAAACTGCAGTTGTA 57.739 33.333 31.73 8.99 38.44 2.41
692 712 6.682746 TCTTGAACAAAAACTGCAGTTGTAA 58.317 32.000 31.73 15.96 38.44 2.41
693 713 7.148641 TCTTGAACAAAAACTGCAGTTGTAAA 58.851 30.769 31.73 20.45 38.44 2.01
694 714 6.942886 TGAACAAAAACTGCAGTTGTAAAG 57.057 33.333 31.73 20.73 38.44 1.85
695 715 6.451393 TGAACAAAAACTGCAGTTGTAAAGT 58.549 32.000 31.73 21.33 38.44 2.66
696 716 6.926272 TGAACAAAAACTGCAGTTGTAAAGTT 59.074 30.769 31.73 27.02 38.44 2.66
697 717 8.082852 TGAACAAAAACTGCAGTTGTAAAGTTA 58.917 29.630 31.73 15.88 38.44 2.24
698 718 8.996024 AACAAAAACTGCAGTTGTAAAGTTAT 57.004 26.923 31.73 10.75 38.44 1.89
703 723 9.946165 AAAACTGCAGTTGTAAAGTTATAAGAC 57.054 29.630 31.73 0.00 38.44 3.01
704 724 8.904099 AACTGCAGTTGTAAAGTTATAAGACT 57.096 30.769 30.66 0.00 36.80 3.24
705 725 9.991906 AACTGCAGTTGTAAAGTTATAAGACTA 57.008 29.630 30.66 0.00 36.80 2.59
706 726 9.991906 ACTGCAGTTGTAAAGTTATAAGACTAA 57.008 29.630 15.25 0.00 0.00 2.24
716 736 7.578169 AAGTTATAAGACTAAACTGACACGC 57.422 36.000 0.00 0.00 33.85 5.34
717 737 6.098017 AGTTATAAGACTAAACTGACACGCC 58.902 40.000 0.00 0.00 32.38 5.68
718 738 4.803098 ATAAGACTAAACTGACACGCCT 57.197 40.909 0.00 0.00 0.00 5.52
719 739 5.909621 ATAAGACTAAACTGACACGCCTA 57.090 39.130 0.00 0.00 0.00 3.93
720 740 3.572604 AGACTAAACTGACACGCCTAC 57.427 47.619 0.00 0.00 0.00 3.18
721 741 2.230750 AGACTAAACTGACACGCCTACC 59.769 50.000 0.00 0.00 0.00 3.18
722 742 1.068055 ACTAAACTGACACGCCTACCG 60.068 52.381 0.00 0.00 44.21 4.02
723 743 0.244450 TAAACTGACACGCCTACCGG 59.756 55.000 0.00 0.00 42.52 5.28
724 744 1.466025 AAACTGACACGCCTACCGGA 61.466 55.000 9.46 0.00 42.52 5.14
725 745 1.874345 AACTGACACGCCTACCGGAG 61.874 60.000 9.46 0.28 42.52 4.63
726 746 2.282674 TGACACGCCTACCGGAGT 60.283 61.111 9.46 0.00 44.78 3.85
727 747 1.874345 CTGACACGCCTACCGGAGTT 61.874 60.000 9.46 0.00 40.75 3.01
728 748 1.291272 GACACGCCTACCGGAGTTT 59.709 57.895 9.46 0.00 40.75 2.66
729 749 0.320160 GACACGCCTACCGGAGTTTT 60.320 55.000 9.46 0.00 40.75 2.43
730 750 0.968405 ACACGCCTACCGGAGTTTTA 59.032 50.000 9.46 0.00 40.75 1.52
731 751 1.067354 ACACGCCTACCGGAGTTTTAG 60.067 52.381 9.46 0.00 40.75 1.85
732 752 0.533951 ACGCCTACCGGAGTTTTAGG 59.466 55.000 9.46 9.88 40.75 2.69
733 753 0.819582 CGCCTACCGGAGTTTTAGGA 59.180 55.000 17.13 0.00 0.00 2.94
734 754 1.470458 CGCCTACCGGAGTTTTAGGAC 60.470 57.143 17.13 8.66 0.00 3.85
735 755 1.134580 GCCTACCGGAGTTTTAGGACC 60.135 57.143 17.13 0.00 0.00 4.46
736 756 2.464782 CCTACCGGAGTTTTAGGACCT 58.535 52.381 9.46 0.00 0.00 3.85
737 757 3.635591 CCTACCGGAGTTTTAGGACCTA 58.364 50.000 9.46 0.00 0.00 3.08
738 758 4.221530 CCTACCGGAGTTTTAGGACCTAT 58.778 47.826 9.46 0.00 0.00 2.57
739 759 4.038883 CCTACCGGAGTTTTAGGACCTATG 59.961 50.000 9.46 0.00 0.00 2.23
740 760 3.716431 ACCGGAGTTTTAGGACCTATGA 58.284 45.455 9.46 0.00 0.00 2.15
741 761 4.296056 ACCGGAGTTTTAGGACCTATGAT 58.704 43.478 9.46 0.00 0.00 2.45
742 762 4.101119 ACCGGAGTTTTAGGACCTATGATG 59.899 45.833 9.46 0.00 0.00 3.07
743 763 4.058817 CGGAGTTTTAGGACCTATGATGC 58.941 47.826 0.94 0.00 0.00 3.91
744 764 4.442893 CGGAGTTTTAGGACCTATGATGCA 60.443 45.833 0.94 0.00 0.00 3.96
745 765 5.625150 GGAGTTTTAGGACCTATGATGCAT 58.375 41.667 0.00 0.00 0.00 3.96
746 766 6.064717 GGAGTTTTAGGACCTATGATGCATT 58.935 40.000 0.00 0.00 0.00 3.56
747 767 6.547510 GGAGTTTTAGGACCTATGATGCATTT 59.452 38.462 0.00 0.00 0.00 2.32
748 768 7.068716 GGAGTTTTAGGACCTATGATGCATTTT 59.931 37.037 0.00 0.00 0.00 1.82
749 769 9.120538 GAGTTTTAGGACCTATGATGCATTTTA 57.879 33.333 0.00 0.00 0.00 1.52
750 770 8.903820 AGTTTTAGGACCTATGATGCATTTTAC 58.096 33.333 0.00 0.00 0.00 2.01
751 771 8.903820 GTTTTAGGACCTATGATGCATTTTACT 58.096 33.333 0.00 0.00 0.00 2.24
752 772 8.677148 TTTAGGACCTATGATGCATTTTACTC 57.323 34.615 0.00 0.00 0.00 2.59
753 773 6.506538 AGGACCTATGATGCATTTTACTCT 57.493 37.500 0.00 0.00 0.00 3.24
754 774 6.904626 AGGACCTATGATGCATTTTACTCTT 58.095 36.000 0.00 0.00 0.00 2.85
755 775 8.034313 AGGACCTATGATGCATTTTACTCTTA 57.966 34.615 0.00 0.00 0.00 2.10
756 776 8.153550 AGGACCTATGATGCATTTTACTCTTAG 58.846 37.037 0.00 0.00 0.00 2.18
757 777 8.150945 GGACCTATGATGCATTTTACTCTTAGA 58.849 37.037 0.00 0.00 0.00 2.10
758 778 9.547753 GACCTATGATGCATTTTACTCTTAGAA 57.452 33.333 0.00 0.00 0.00 2.10
759 779 9.905713 ACCTATGATGCATTTTACTCTTAGAAA 57.094 29.630 0.00 0.00 0.00 2.52
788 808 5.763204 TGCAACTTCTTATTTTCTTCGAGGT 59.237 36.000 0.00 0.00 0.00 3.85
789 809 6.073222 TGCAACTTCTTATTTTCTTCGAGGTC 60.073 38.462 0.00 0.00 0.00 3.85
793 813 9.720769 AACTTCTTATTTTCTTCGAGGTCAATA 57.279 29.630 0.00 0.00 0.00 1.90
794 814 9.892130 ACTTCTTATTTTCTTCGAGGTCAATAT 57.108 29.630 0.00 0.00 0.00 1.28
797 817 9.884636 TCTTATTTTCTTCGAGGTCAATATTCA 57.115 29.630 0.00 0.00 0.00 2.57
818 838 5.640732 TCACAGAAAAGAAAAACTCAGCAC 58.359 37.500 0.00 0.00 0.00 4.40
973 1025 3.020237 GCGTCTCAACCCCTCTCCC 62.020 68.421 0.00 0.00 0.00 4.30
974 1026 1.305381 CGTCTCAACCCCTCTCCCT 60.305 63.158 0.00 0.00 0.00 4.20
975 1027 1.324005 CGTCTCAACCCCTCTCCCTC 61.324 65.000 0.00 0.00 0.00 4.30
976 1028 0.041982 GTCTCAACCCCTCTCCCTCT 59.958 60.000 0.00 0.00 0.00 3.69
977 1029 0.336737 TCTCAACCCCTCTCCCTCTC 59.663 60.000 0.00 0.00 0.00 3.20
978 1030 0.689412 CTCAACCCCTCTCCCTCTCC 60.689 65.000 0.00 0.00 0.00 3.71
1273 1325 1.062440 CGCGTTGATGCTTGCTTATCA 59.938 47.619 0.00 0.00 0.00 2.15
1404 1456 6.312426 CGCAAGATTCCAGGATTCATATAGTC 59.688 42.308 12.92 0.00 43.02 2.59
1442 1494 3.745799 TGGCGAACTCTGTATTTGGAAA 58.254 40.909 0.00 0.00 0.00 3.13
1483 1535 3.145228 GCACCTCTGCAACTACTCC 57.855 57.895 0.00 0.00 43.62 3.85
1484 1536 0.391793 GCACCTCTGCAACTACTCCC 60.392 60.000 0.00 0.00 43.62 4.30
1485 1537 1.270907 CACCTCTGCAACTACTCCCT 58.729 55.000 0.00 0.00 0.00 4.20
1486 1538 1.205893 CACCTCTGCAACTACTCCCTC 59.794 57.143 0.00 0.00 0.00 4.30
1488 1540 1.480137 CCTCTGCAACTACTCCCTCTG 59.520 57.143 0.00 0.00 0.00 3.35
1490 1542 3.357203 CTCTGCAACTACTCCCTCTGTA 58.643 50.000 0.00 0.00 0.00 2.74
1491 1543 3.764434 CTCTGCAACTACTCCCTCTGTAA 59.236 47.826 0.00 0.00 0.00 2.41
1493 1545 4.021368 TCTGCAACTACTCCCTCTGTAAAC 60.021 45.833 0.00 0.00 0.00 2.01
1494 1546 3.901844 TGCAACTACTCCCTCTGTAAACT 59.098 43.478 0.00 0.00 0.00 2.66
1495 1547 4.347000 TGCAACTACTCCCTCTGTAAACTT 59.653 41.667 0.00 0.00 0.00 2.66
1496 1548 5.541101 TGCAACTACTCCCTCTGTAAACTTA 59.459 40.000 0.00 0.00 0.00 2.24
1497 1549 6.212791 TGCAACTACTCCCTCTGTAAACTTAT 59.787 38.462 0.00 0.00 0.00 1.73
1498 1550 7.398047 TGCAACTACTCCCTCTGTAAACTTATA 59.602 37.037 0.00 0.00 0.00 0.98
1499 1551 8.422566 GCAACTACTCCCTCTGTAAACTTATAT 58.577 37.037 0.00 0.00 0.00 0.86
1505 1557 8.862085 ACTCCCTCTGTAAACTTATATAAGAGC 58.138 37.037 25.83 13.66 37.08 4.09
1506 1558 7.883217 TCCCTCTGTAAACTTATATAAGAGCG 58.117 38.462 25.83 9.53 37.08 5.03
1507 1559 7.504911 TCCCTCTGTAAACTTATATAAGAGCGT 59.495 37.037 25.83 11.63 37.08 5.07
1509 1561 9.530633 CCTCTGTAAACTTATATAAGAGCGTTT 57.469 33.333 25.83 18.28 37.08 3.60
1524 1576 9.953697 ATAAGAGCGTTTAGATCACTACTTTAG 57.046 33.333 0.00 0.00 37.82 1.85
1526 1578 8.503458 AGAGCGTTTAGATCACTACTTTAGTA 57.497 34.615 0.00 0.00 37.82 1.82
1527 1579 9.122779 AGAGCGTTTAGATCACTACTTTAGTAT 57.877 33.333 0.00 0.00 37.82 2.12
1528 1580 9.733219 GAGCGTTTAGATCACTACTTTAGTATT 57.267 33.333 0.00 0.00 37.23 1.89
1529 1581 9.733219 AGCGTTTAGATCACTACTTTAGTATTC 57.267 33.333 0.00 0.00 37.23 1.75
1530 1582 9.733219 GCGTTTAGATCACTACTTTAGTATTCT 57.267 33.333 0.00 0.00 37.23 2.40
1536 1588 9.733219 AGATCACTACTTTAGTATTCTAAACGC 57.267 33.333 0.76 0.00 40.05 4.84
1537 1589 9.733219 GATCACTACTTTAGTATTCTAAACGCT 57.267 33.333 0.76 0.00 40.05 5.07
1538 1590 9.733219 ATCACTACTTTAGTATTCTAAACGCTC 57.267 33.333 0.76 0.00 40.05 5.03
1539 1591 8.954350 TCACTACTTTAGTATTCTAAACGCTCT 58.046 33.333 0.76 0.00 40.05 4.09
1540 1592 9.570488 CACTACTTTAGTATTCTAAACGCTCTT 57.430 33.333 0.76 0.00 40.05 2.85
1555 1607 9.669353 CTAAACGCTCTTATATTAGTTTACGGA 57.331 33.333 0.00 0.00 34.29 4.69
1559 1611 6.072286 CGCTCTTATATTAGTTTACGGAGGGA 60.072 42.308 0.00 0.00 34.63 4.20
1560 1612 7.314393 GCTCTTATATTAGTTTACGGAGGGAG 58.686 42.308 0.00 0.00 0.00 4.30
1561 1613 7.039853 GCTCTTATATTAGTTTACGGAGGGAGT 60.040 40.741 0.00 0.00 0.00 3.85
1562 1614 9.512588 CTCTTATATTAGTTTACGGAGGGAGTA 57.487 37.037 0.00 0.00 0.00 2.59
1563 1615 9.289782 TCTTATATTAGTTTACGGAGGGAGTAC 57.710 37.037 0.00 0.00 0.00 2.73
1564 1616 9.294614 CTTATATTAGTTTACGGAGGGAGTACT 57.705 37.037 0.00 0.00 0.00 2.73
1709 3033 6.774170 AGATAAATCACTAGCATGGCATTGAA 59.226 34.615 0.00 0.00 0.00 2.69
1724 3048 6.686630 TGGCATTGAAAGAATTAACGACATT 58.313 32.000 0.00 0.00 0.00 2.71
1892 3239 1.302033 CAGCTGCCTTCTTGTCGGT 60.302 57.895 0.00 0.00 0.00 4.69
2060 3411 3.702048 CGGAGAGGCGGGGTTTCA 61.702 66.667 0.00 0.00 0.00 2.69
2149 3505 2.981560 GAACGACGGTGGGCGTAGA 61.982 63.158 0.00 0.00 40.23 2.59
2319 3684 6.481644 CAGCTATCAGAAAACTCTCCATTACC 59.518 42.308 0.00 0.00 0.00 2.85
2325 3691 4.283722 AGAAAACTCTCCATTACCGACTGT 59.716 41.667 0.00 0.00 0.00 3.55
2334 3700 6.816640 TCTCCATTACCGACTGTCAAAAATAG 59.183 38.462 8.73 0.00 0.00 1.73
2672 4075 1.137479 AGACTTGGGAAAACGTCGACA 59.863 47.619 17.16 0.00 0.00 4.35
2790 4194 9.305925 GCCCATCTAACAATTTCTAAAAATCTG 57.694 33.333 0.00 0.00 33.93 2.90
2834 4253 1.726192 GGGAAGTTTGGTCCACCCCT 61.726 60.000 3.46 0.00 36.83 4.79
3036 4897 7.196331 GCTTATTTTTGCTAGTCAGTAATGGG 58.804 38.462 0.00 0.00 0.00 4.00
3051 4912 3.884037 AATGGGGAGTTTTCTGACAGT 57.116 42.857 1.59 0.00 0.00 3.55
3072 4937 0.953960 GGGCCACGATTTGAGACGTT 60.954 55.000 4.39 0.00 40.76 3.99
3315 5185 0.755698 GCCTCTCCGGATCCTGTACA 60.756 60.000 3.57 0.00 33.16 2.90
3562 5498 2.486592 CCCGCTCCTGTTTATTTTCGTT 59.513 45.455 0.00 0.00 0.00 3.85
3624 5561 3.442625 TGCATAGTACGTGCTTGTCTAGT 59.557 43.478 12.53 0.00 42.92 2.57
3714 5666 8.739972 AGTCGAAAAATTGCCTATTTACTCAAT 58.260 29.630 0.00 0.00 35.39 2.57
3843 5798 0.674895 GCAGACACTGTTGCCCCTAG 60.675 60.000 0.00 0.00 34.28 3.02
4236 6276 0.034896 ACGGTTCGAGTCCTGCAAAT 59.965 50.000 7.05 0.00 0.00 2.32
4366 6406 3.119291 CGGCTCTGTGCACTAATTCTAG 58.881 50.000 19.41 5.02 45.15 2.43
4552 6592 0.751277 TGGTGTTGGCTGGTGAACTG 60.751 55.000 0.00 0.00 0.00 3.16
4682 6722 6.413818 GTGCATGTTTACTTGTACACACTTTC 59.586 38.462 0.00 0.00 36.89 2.62
4981 7030 6.071278 CCAAAGAGGTACTAACTGCTAACTCT 60.071 42.308 0.00 0.00 41.55 3.24
4990 7039 9.505995 GTACTAACTGCTAACTCTCATAGTTTC 57.494 37.037 0.00 0.00 46.61 2.78
5200 7249 8.548877 ACTGTAACTAGGGAACAATGTATGATT 58.451 33.333 0.00 0.00 0.00 2.57
5233 7282 6.488769 TTGAACGGGTATATGATGTAGGTT 57.511 37.500 0.00 0.00 0.00 3.50
5370 7427 7.429636 TTCTGGTAATAGGAAAACAAAGTCG 57.570 36.000 0.00 0.00 0.00 4.18
5374 7431 6.073657 TGGTAATAGGAAAACAAAGTCGAACG 60.074 38.462 0.00 0.00 0.00 3.95
5419 7476 8.934023 TTTCATTCTTCTTACAACATTACCCT 57.066 30.769 0.00 0.00 0.00 4.34
5578 7636 3.057734 GTTGTGTGAAGTACCCTCGAAG 58.942 50.000 0.00 0.00 0.00 3.79
5797 7954 9.740239 AGCACACATTACATATTCATTTGATTC 57.260 29.630 0.00 0.00 0.00 2.52
5882 8039 2.899256 CCCCCTGTTGACAAATGAACAT 59.101 45.455 0.00 0.00 31.81 2.71
6001 8177 1.321474 CCATCGATGGGGGTGAAATG 58.679 55.000 32.99 6.56 44.31 2.32
6087 8263 4.985538 TCATATCCCTCTAACCAAATGCC 58.014 43.478 0.00 0.00 0.00 4.40
6091 8267 1.474330 CCTCTAACCAAATGCCACCC 58.526 55.000 0.00 0.00 0.00 4.61
6099 8275 0.890683 CAAATGCCACCCTGTTCTCC 59.109 55.000 0.00 0.00 0.00 3.71
6145 8321 3.611766 GCAGAGGGTGTTTCGGAATTTTC 60.612 47.826 0.00 0.00 0.00 2.29
6160 8336 5.515982 CGGAATTTTCGCATCAATGATTTCA 59.484 36.000 0.00 0.00 0.00 2.69
6191 8367 2.454772 AGTTCATTTTCCCCTTCCCCTT 59.545 45.455 0.00 0.00 0.00 3.95
6219 8395 4.916983 TGCCAATCTGGGAAATAAATCG 57.083 40.909 0.00 0.00 33.84 3.34
6344 8522 5.699458 CCTCTGTACCAAAATGTAAGACGTT 59.301 40.000 0.00 0.00 0.00 3.99
6442 8620 2.352034 TCTCTCTCTGCGTAGTTTAGCG 59.648 50.000 0.00 0.00 35.87 4.26
6636 8848 5.535783 TCTTTGATGCACAGGATTTCAGAAA 59.464 36.000 0.00 0.00 0.00 2.52
6718 8931 0.457851 TTGGCACCACAGGAAAAACG 59.542 50.000 0.00 0.00 0.00 3.60
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 1.202830 TGACGCAACCCCAATAACAGT 60.203 47.619 0.00 0.00 0.00 3.55
46 47 3.013921 GAGAATGACGCAACCCCAATAA 58.986 45.455 0.00 0.00 0.00 1.40
49 50 0.109532 TGAGAATGACGCAACCCCAA 59.890 50.000 0.00 0.00 0.00 4.12
68 69 2.660258 AAGCTGACGCAAAGGTCGGT 62.660 55.000 0.00 0.00 43.68 4.69
120 121 1.079612 GGGGAATTGTTGCTGCTGC 60.080 57.895 8.89 8.89 40.20 5.25
145 146 2.327343 GCTTGGCACGAGCATGACA 61.327 57.895 7.26 0.00 44.61 3.58
160 161 1.727467 GTCGTGCAGGTTGTTGCTT 59.273 52.632 6.26 0.00 44.38 3.91
162 163 2.052237 CGTCGTGCAGGTTGTTGC 60.052 61.111 6.26 0.00 44.33 4.17
177 179 0.039035 ACTCTTCCCTCAGAGCTCGT 59.961 55.000 8.37 0.00 43.83 4.18
179 181 1.555967 ACACTCTTCCCTCAGAGCTC 58.444 55.000 5.27 5.27 43.83 4.09
186 188 2.842645 TACCCCTACACTCTTCCCTC 57.157 55.000 0.00 0.00 0.00 4.30
187 189 3.078612 TCTTTACCCCTACACTCTTCCCT 59.921 47.826 0.00 0.00 0.00 4.20
190 192 5.479124 TTGTCTTTACCCCTACACTCTTC 57.521 43.478 0.00 0.00 0.00 2.87
194 196 4.595781 TGACATTGTCTTTACCCCTACACT 59.404 41.667 17.26 0.00 33.15 3.55
199 201 4.536090 TCTCATGACATTGTCTTTACCCCT 59.464 41.667 17.26 0.00 33.15 4.79
204 206 7.147932 CCTCTCTCTCTCATGACATTGTCTTTA 60.148 40.741 17.26 2.83 33.15 1.85
207 209 4.646040 CCTCTCTCTCTCATGACATTGTCT 59.354 45.833 17.26 1.18 33.15 3.41
211 213 3.705579 CCACCTCTCTCTCTCATGACATT 59.294 47.826 0.00 0.00 0.00 2.71
214 216 2.733956 ACCACCTCTCTCTCTCATGAC 58.266 52.381 0.00 0.00 0.00 3.06
242 262 1.027357 CAAGCCAATCGGGATGGAAG 58.973 55.000 6.28 0.00 40.56 3.46
243 263 0.395586 CCAAGCCAATCGGGATGGAA 60.396 55.000 6.28 0.00 44.06 3.53
252 272 4.666105 GGAGACCCCAAGCCAATC 57.334 61.111 0.00 0.00 34.14 2.67
279 299 3.878519 CCTCTCCCTCGACGACGC 61.879 72.222 1.48 0.00 39.58 5.19
280 300 2.944409 ATCCCTCTCCCTCGACGACG 62.944 65.000 0.00 0.00 41.26 5.12
281 301 1.152922 ATCCCTCTCCCTCGACGAC 60.153 63.158 0.00 0.00 0.00 4.34
282 302 1.152943 CATCCCTCTCCCTCGACGA 60.153 63.158 0.00 0.00 0.00 4.20
283 303 1.448922 GACATCCCTCTCCCTCGACG 61.449 65.000 0.00 0.00 0.00 5.12
284 304 0.395862 TGACATCCCTCTCCCTCGAC 60.396 60.000 0.00 0.00 0.00 4.20
285 305 0.558220 ATGACATCCCTCTCCCTCGA 59.442 55.000 0.00 0.00 0.00 4.04
286 306 0.965439 GATGACATCCCTCTCCCTCG 59.035 60.000 3.89 0.00 0.00 4.63
287 307 1.347062 GGATGACATCCCTCTCCCTC 58.653 60.000 22.12 0.00 43.88 4.30
288 308 3.567902 GGATGACATCCCTCTCCCT 57.432 57.895 22.12 0.00 43.88 4.20
295 315 3.881808 TCAGCATGGAGGATGACATCCC 61.882 54.545 27.60 19.23 45.16 3.85
296 316 1.419012 TCAGCATGGAGGATGACATCC 59.581 52.381 24.69 24.69 45.85 3.51
297 317 2.924757 TCAGCATGGAGGATGACATC 57.075 50.000 6.91 6.91 36.16 3.06
301 321 0.835276 CCAGTCAGCATGGAGGATGA 59.165 55.000 0.00 0.00 40.51 2.92
302 322 0.835276 TCCAGTCAGCATGGAGGATG 59.165 55.000 0.00 0.00 41.96 3.51
303 323 3.329497 TCCAGTCAGCATGGAGGAT 57.671 52.632 0.00 0.00 41.96 3.24
304 324 4.894719 TCCAGTCAGCATGGAGGA 57.105 55.556 0.00 0.00 41.96 3.71
308 328 1.227764 CCCGATCCAGTCAGCATGG 60.228 63.158 0.00 0.00 39.33 3.66
309 329 1.227764 CCCCGATCCAGTCAGCATG 60.228 63.158 0.00 0.00 37.54 4.06
310 330 1.690219 GACCCCGATCCAGTCAGCAT 61.690 60.000 0.00 0.00 0.00 3.79
311 331 2.284625 ACCCCGATCCAGTCAGCA 60.285 61.111 0.00 0.00 0.00 4.41
312 332 2.022240 GAGACCCCGATCCAGTCAGC 62.022 65.000 7.06 0.00 32.82 4.26
313 333 1.395826 GGAGACCCCGATCCAGTCAG 61.396 65.000 7.06 0.00 35.54 3.51
314 334 1.381327 GGAGACCCCGATCCAGTCA 60.381 63.158 7.06 0.00 35.54 3.41
315 335 1.075896 AGGAGACCCCGATCCAGTC 60.076 63.158 0.00 0.00 40.87 3.51
316 336 1.075896 GAGGAGACCCCGATCCAGT 60.076 63.158 0.00 0.00 40.87 4.00
317 337 2.196925 CGAGGAGACCCCGATCCAG 61.197 68.421 0.00 0.00 40.87 3.86
318 338 2.123854 CGAGGAGACCCCGATCCA 60.124 66.667 0.00 0.00 40.87 3.41
319 339 2.913060 CCGAGGAGACCCCGATCC 60.913 72.222 0.00 0.00 40.87 3.36
320 340 3.607661 GCCGAGGAGACCCCGATC 61.608 72.222 0.00 0.00 40.87 3.69
339 359 3.896863 CTGAAAGGTTTGGCGCGGC 62.897 63.158 27.61 27.61 0.00 6.53
340 360 2.255252 CTGAAAGGTTTGGCGCGG 59.745 61.111 8.83 0.00 0.00 6.46
341 361 2.429069 GCTGAAAGGTTTGGCGCG 60.429 61.111 0.00 0.00 0.00 6.86
342 362 2.429069 CGCTGAAAGGTTTGGCGC 60.429 61.111 0.00 0.00 39.42 6.53
343 363 1.207593 CTCGCTGAAAGGTTTGGCG 59.792 57.895 11.04 11.04 45.93 5.69
344 364 1.581447 CCTCGCTGAAAGGTTTGGC 59.419 57.895 0.00 0.00 0.00 4.52
345 365 0.890996 AGCCTCGCTGAAAGGTTTGG 60.891 55.000 0.00 0.00 37.57 3.28
346 366 2.633860 AGCCTCGCTGAAAGGTTTG 58.366 52.632 0.00 0.00 37.57 2.93
356 376 3.465403 CTACAGGGCAGCCTCGCT 61.465 66.667 12.43 0.00 40.77 4.93
358 378 3.438017 GAGCTACAGGGCAGCCTCG 62.438 68.421 12.43 5.16 39.99 4.63
359 379 1.694133 ATGAGCTACAGGGCAGCCTC 61.694 60.000 12.43 1.02 39.99 4.70
360 380 1.692042 ATGAGCTACAGGGCAGCCT 60.692 57.895 12.43 0.00 39.99 4.58
361 381 1.525535 CATGAGCTACAGGGCAGCC 60.526 63.158 1.26 1.26 39.99 4.85
362 382 1.525535 CCATGAGCTACAGGGCAGC 60.526 63.158 0.00 0.00 43.46 5.25
363 383 4.872357 CCATGAGCTACAGGGCAG 57.128 61.111 0.00 0.00 43.46 4.85
367 387 1.134310 TGCATGACCATGAGCTACAGG 60.134 52.381 13.67 0.00 41.20 4.00
368 388 2.210961 CTGCATGACCATGAGCTACAG 58.789 52.381 13.67 7.07 41.20 2.74
369 389 1.134310 CCTGCATGACCATGAGCTACA 60.134 52.381 13.67 1.49 41.20 2.74
370 390 1.590932 CCTGCATGACCATGAGCTAC 58.409 55.000 13.67 0.00 41.20 3.58
371 391 0.471191 CCCTGCATGACCATGAGCTA 59.529 55.000 13.67 0.00 41.20 3.32
372 392 1.226542 CCCTGCATGACCATGAGCT 59.773 57.895 13.67 0.00 41.20 4.09
373 393 1.077212 ACCCTGCATGACCATGAGC 60.077 57.895 13.67 0.25 41.20 4.26
374 394 0.034767 ACACCCTGCATGACCATGAG 60.035 55.000 13.67 7.94 41.20 2.90
375 395 0.405198 AACACCCTGCATGACCATGA 59.595 50.000 13.67 0.00 41.20 3.07
376 396 0.528924 CAACACCCTGCATGACCATG 59.471 55.000 0.00 5.67 41.60 3.66
377 397 0.612732 CCAACACCCTGCATGACCAT 60.613 55.000 0.00 0.00 0.00 3.55
378 398 1.228521 CCAACACCCTGCATGACCA 60.229 57.895 0.00 0.00 0.00 4.02
379 399 1.978617 CCCAACACCCTGCATGACC 60.979 63.158 0.00 0.00 0.00 4.02
380 400 2.639327 GCCCAACACCCTGCATGAC 61.639 63.158 0.00 0.00 0.00 3.06
381 401 2.283101 GCCCAACACCCTGCATGA 60.283 61.111 0.00 0.00 0.00 3.07
382 402 3.751246 CGCCCAACACCCTGCATG 61.751 66.667 0.00 0.00 0.00 4.06
383 403 4.284550 ACGCCCAACACCCTGCAT 62.285 61.111 0.00 0.00 0.00 3.96
387 407 4.954970 CTGCACGCCCAACACCCT 62.955 66.667 0.00 0.00 0.00 4.34
390 410 3.216292 AACCTGCACGCCCAACAC 61.216 61.111 0.00 0.00 0.00 3.32
391 411 3.215568 CAACCTGCACGCCCAACA 61.216 61.111 0.00 0.00 0.00 3.33
392 412 4.645921 GCAACCTGCACGCCCAAC 62.646 66.667 0.00 0.00 44.26 3.77
401 421 0.526096 CAGTGTGTGTTGCAACCTGC 60.526 55.000 26.14 16.28 45.29 4.85
402 422 0.810648 ACAGTGTGTGTTGCAACCTG 59.189 50.000 26.14 24.36 34.94 4.00
403 423 0.810648 CACAGTGTGTGTTGCAACCT 59.189 50.000 26.14 12.85 43.08 3.50
404 424 3.327464 CACAGTGTGTGTTGCAACC 57.673 52.632 26.14 17.38 43.08 3.77
422 442 4.377897 AGTGGTTTATACGCTTCCATAGC 58.622 43.478 0.00 0.00 46.83 2.97
423 443 6.920569 AAAGTGGTTTATACGCTTCCATAG 57.079 37.500 0.00 0.00 0.00 2.23
424 444 6.094325 CCAAAAGTGGTTTATACGCTTCCATA 59.906 38.462 0.00 0.00 40.42 2.74
425 445 5.105917 CCAAAAGTGGTTTATACGCTTCCAT 60.106 40.000 0.00 0.00 40.42 3.41
426 446 4.216687 CCAAAAGTGGTTTATACGCTTCCA 59.783 41.667 0.00 0.00 40.42 3.53
427 447 4.380128 CCCAAAAGTGGTTTATACGCTTCC 60.380 45.833 0.00 0.00 44.30 3.46
428 448 4.456566 TCCCAAAAGTGGTTTATACGCTTC 59.543 41.667 0.00 0.00 44.30 3.86
429 449 4.400120 TCCCAAAAGTGGTTTATACGCTT 58.600 39.130 0.00 0.00 44.30 4.68
430 450 4.023726 TCCCAAAAGTGGTTTATACGCT 57.976 40.909 0.00 0.00 44.30 5.07
431 451 4.216902 ACTTCCCAAAAGTGGTTTATACGC 59.783 41.667 0.00 0.00 44.30 4.42
432 452 5.952526 ACTTCCCAAAAGTGGTTTATACG 57.047 39.130 0.00 0.00 44.30 3.06
433 453 8.631797 TGTTTACTTCCCAAAAGTGGTTTATAC 58.368 33.333 0.81 0.00 44.30 1.47
434 454 8.631797 GTGTTTACTTCCCAAAAGTGGTTTATA 58.368 33.333 0.81 0.00 44.30 0.98
435 455 7.124448 TGTGTTTACTTCCCAAAAGTGGTTTAT 59.876 33.333 0.81 0.00 44.30 1.40
436 456 6.436532 TGTGTTTACTTCCCAAAAGTGGTTTA 59.563 34.615 0.81 0.00 44.30 2.01
437 457 5.246429 TGTGTTTACTTCCCAAAAGTGGTTT 59.754 36.000 0.81 0.00 44.30 3.27
438 458 4.773149 TGTGTTTACTTCCCAAAAGTGGTT 59.227 37.500 0.81 0.00 44.30 3.67
439 459 4.345854 TGTGTTTACTTCCCAAAAGTGGT 58.654 39.130 0.81 0.00 44.30 4.16
440 460 4.642885 TCTGTGTTTACTTCCCAAAAGTGG 59.357 41.667 0.81 0.00 45.53 4.00
441 461 5.828299 TCTGTGTTTACTTCCCAAAAGTG 57.172 39.130 0.81 0.00 0.00 3.16
442 462 8.528044 TTTATCTGTGTTTACTTCCCAAAAGT 57.472 30.769 0.00 0.00 0.00 2.66
443 463 8.082242 CCTTTATCTGTGTTTACTTCCCAAAAG 58.918 37.037 0.00 0.00 0.00 2.27
444 464 7.014808 CCCTTTATCTGTGTTTACTTCCCAAAA 59.985 37.037 0.00 0.00 0.00 2.44
445 465 6.492087 CCCTTTATCTGTGTTTACTTCCCAAA 59.508 38.462 0.00 0.00 0.00 3.28
446 466 6.007703 CCCTTTATCTGTGTTTACTTCCCAA 58.992 40.000 0.00 0.00 0.00 4.12
447 467 5.566469 CCCTTTATCTGTGTTTACTTCCCA 58.434 41.667 0.00 0.00 0.00 4.37
448 468 4.398358 GCCCTTTATCTGTGTTTACTTCCC 59.602 45.833 0.00 0.00 0.00 3.97
449 469 5.254115 AGCCCTTTATCTGTGTTTACTTCC 58.746 41.667 0.00 0.00 0.00 3.46
450 470 5.938125 TGAGCCCTTTATCTGTGTTTACTTC 59.062 40.000 0.00 0.00 0.00 3.01
451 471 5.876357 TGAGCCCTTTATCTGTGTTTACTT 58.124 37.500 0.00 0.00 0.00 2.24
452 472 5.499004 TGAGCCCTTTATCTGTGTTTACT 57.501 39.130 0.00 0.00 0.00 2.24
453 473 6.759497 AATGAGCCCTTTATCTGTGTTTAC 57.241 37.500 0.00 0.00 0.00 2.01
454 474 6.945435 TCAAATGAGCCCTTTATCTGTGTTTA 59.055 34.615 0.00 0.00 0.00 2.01
455 475 5.774690 TCAAATGAGCCCTTTATCTGTGTTT 59.225 36.000 0.00 0.00 0.00 2.83
456 476 5.324409 TCAAATGAGCCCTTTATCTGTGTT 58.676 37.500 0.00 0.00 0.00 3.32
457 477 4.922206 TCAAATGAGCCCTTTATCTGTGT 58.078 39.130 0.00 0.00 0.00 3.72
458 478 5.902613 TTCAAATGAGCCCTTTATCTGTG 57.097 39.130 0.00 0.00 0.00 3.66
459 479 6.267471 TGTTTTCAAATGAGCCCTTTATCTGT 59.733 34.615 0.00 0.00 0.00 3.41
460 480 6.690530 TGTTTTCAAATGAGCCCTTTATCTG 58.309 36.000 0.00 0.00 0.00 2.90
461 481 6.916360 TGTTTTCAAATGAGCCCTTTATCT 57.084 33.333 0.00 0.00 0.00 1.98
462 482 7.961325 TTTGTTTTCAAATGAGCCCTTTATC 57.039 32.000 0.00 0.00 43.72 1.75
475 495 7.783090 TCTATGCTGCATTTTTGTTTTCAAA 57.217 28.000 21.56 0.00 46.39 2.69
476 496 7.798801 CATCTATGCTGCATTTTTGTTTTCAA 58.201 30.769 21.56 0.00 38.10 2.69
477 497 7.354025 CATCTATGCTGCATTTTTGTTTTCA 57.646 32.000 21.56 0.00 0.00 2.69
494 514 3.001414 GCTAGCATGTCCAGCATCTATG 58.999 50.000 10.63 0.00 35.19 2.23
495 515 2.905085 AGCTAGCATGTCCAGCATCTAT 59.095 45.455 18.83 0.00 37.78 1.98
496 516 2.323599 AGCTAGCATGTCCAGCATCTA 58.676 47.619 18.83 0.00 37.78 1.98
497 517 1.129917 AGCTAGCATGTCCAGCATCT 58.870 50.000 18.83 0.00 37.78 2.90
498 518 1.964552 AAGCTAGCATGTCCAGCATC 58.035 50.000 18.83 0.00 37.78 3.91
499 519 2.224475 CCTAAGCTAGCATGTCCAGCAT 60.224 50.000 18.83 7.79 37.78 3.79
500 520 1.139654 CCTAAGCTAGCATGTCCAGCA 59.860 52.381 18.83 0.00 37.78 4.41
501 521 1.414181 TCCTAAGCTAGCATGTCCAGC 59.586 52.381 18.83 7.10 35.49 4.85
502 522 2.697751 AGTCCTAAGCTAGCATGTCCAG 59.302 50.000 18.83 0.00 0.00 3.86
503 523 2.752030 AGTCCTAAGCTAGCATGTCCA 58.248 47.619 18.83 0.00 0.00 4.02
504 524 3.133003 TCAAGTCCTAAGCTAGCATGTCC 59.867 47.826 18.83 0.00 0.00 4.02
505 525 4.098654 TCTCAAGTCCTAAGCTAGCATGTC 59.901 45.833 18.83 2.17 0.00 3.06
506 526 4.026744 TCTCAAGTCCTAAGCTAGCATGT 58.973 43.478 18.83 4.05 0.00 3.21
507 527 4.662468 TCTCAAGTCCTAAGCTAGCATG 57.338 45.455 18.83 6.08 0.00 4.06
508 528 4.898265 TCATCTCAAGTCCTAAGCTAGCAT 59.102 41.667 18.83 7.77 0.00 3.79
509 529 4.281657 TCATCTCAAGTCCTAAGCTAGCA 58.718 43.478 18.83 0.00 0.00 3.49
510 530 4.927978 TCATCTCAAGTCCTAAGCTAGC 57.072 45.455 6.62 6.62 0.00 3.42
511 531 6.214191 TGTTCATCTCAAGTCCTAAGCTAG 57.786 41.667 0.00 0.00 0.00 3.42
512 532 6.605471 TTGTTCATCTCAAGTCCTAAGCTA 57.395 37.500 0.00 0.00 0.00 3.32
513 533 5.489792 TTGTTCATCTCAAGTCCTAAGCT 57.510 39.130 0.00 0.00 0.00 3.74
514 534 5.703130 AGTTTGTTCATCTCAAGTCCTAAGC 59.297 40.000 0.00 0.00 0.00 3.09
515 535 7.736447 AAGTTTGTTCATCTCAAGTCCTAAG 57.264 36.000 0.00 0.00 0.00 2.18
516 536 9.793259 ATTAAGTTTGTTCATCTCAAGTCCTAA 57.207 29.630 0.00 0.00 0.00 2.69
517 537 9.793259 AATTAAGTTTGTTCATCTCAAGTCCTA 57.207 29.630 0.00 0.00 0.00 2.94
518 538 8.697507 AATTAAGTTTGTTCATCTCAAGTCCT 57.302 30.769 0.00 0.00 0.00 3.85
562 582 9.554724 GTTCAGTCTTATAAATTCGAAAATGCA 57.445 29.630 0.00 0.00 0.00 3.96
563 583 9.774742 AGTTCAGTCTTATAAATTCGAAAATGC 57.225 29.630 0.00 0.00 0.00 3.56
567 587 9.483916 TGTCAGTTCAGTCTTATAAATTCGAAA 57.516 29.630 0.00 0.00 0.00 3.46
568 588 8.922676 GTGTCAGTTCAGTCTTATAAATTCGAA 58.077 33.333 0.00 0.00 0.00 3.71
569 589 8.085909 TGTGTCAGTTCAGTCTTATAAATTCGA 58.914 33.333 0.00 0.00 0.00 3.71
570 590 8.162880 GTGTGTCAGTTCAGTCTTATAAATTCG 58.837 37.037 0.00 0.00 0.00 3.34
571 591 8.443937 GGTGTGTCAGTTCAGTCTTATAAATTC 58.556 37.037 0.00 0.00 0.00 2.17
572 592 8.157476 AGGTGTGTCAGTTCAGTCTTATAAATT 58.843 33.333 0.00 0.00 0.00 1.82
573 593 7.680730 AGGTGTGTCAGTTCAGTCTTATAAAT 58.319 34.615 0.00 0.00 0.00 1.40
574 594 7.062749 AGGTGTGTCAGTTCAGTCTTATAAA 57.937 36.000 0.00 0.00 0.00 1.40
575 595 6.665992 AGGTGTGTCAGTTCAGTCTTATAA 57.334 37.500 0.00 0.00 0.00 0.98
576 596 6.266786 TGAAGGTGTGTCAGTTCAGTCTTATA 59.733 38.462 0.00 0.00 0.00 0.98
577 597 5.070446 TGAAGGTGTGTCAGTTCAGTCTTAT 59.930 40.000 0.00 0.00 0.00 1.73
578 598 4.404394 TGAAGGTGTGTCAGTTCAGTCTTA 59.596 41.667 0.00 0.00 0.00 2.10
579 599 3.197766 TGAAGGTGTGTCAGTTCAGTCTT 59.802 43.478 0.00 0.00 0.00 3.01
580 600 2.766263 TGAAGGTGTGTCAGTTCAGTCT 59.234 45.455 0.00 0.00 0.00 3.24
581 601 3.179443 TGAAGGTGTGTCAGTTCAGTC 57.821 47.619 0.00 0.00 0.00 3.51
582 602 3.627395 TTGAAGGTGTGTCAGTTCAGT 57.373 42.857 0.00 0.00 30.86 3.41
583 603 5.300752 ACTATTGAAGGTGTGTCAGTTCAG 58.699 41.667 0.00 0.00 30.86 3.02
584 604 5.290493 ACTATTGAAGGTGTGTCAGTTCA 57.710 39.130 0.00 0.00 0.00 3.18
585 605 6.619801 AAACTATTGAAGGTGTGTCAGTTC 57.380 37.500 0.00 0.00 0.00 3.01
586 606 6.183360 CCAAAACTATTGAAGGTGTGTCAGTT 60.183 38.462 0.00 0.00 0.00 3.16
587 607 5.299279 CCAAAACTATTGAAGGTGTGTCAGT 59.701 40.000 0.00 0.00 0.00 3.41
588 608 5.278463 CCCAAAACTATTGAAGGTGTGTCAG 60.278 44.000 0.00 0.00 0.00 3.51
589 609 4.582656 CCCAAAACTATTGAAGGTGTGTCA 59.417 41.667 0.00 0.00 0.00 3.58
590 610 4.825085 TCCCAAAACTATTGAAGGTGTGTC 59.175 41.667 0.00 0.00 0.00 3.67
591 611 4.798882 TCCCAAAACTATTGAAGGTGTGT 58.201 39.130 0.00 0.00 0.00 3.72
592 612 5.982890 ATCCCAAAACTATTGAAGGTGTG 57.017 39.130 0.00 0.00 0.00 3.82
593 613 6.074648 TGAATCCCAAAACTATTGAAGGTGT 58.925 36.000 0.00 0.00 0.00 4.16
594 614 6.588719 TGAATCCCAAAACTATTGAAGGTG 57.411 37.500 0.00 0.00 0.00 4.00
595 615 7.610580 TTTGAATCCCAAAACTATTGAAGGT 57.389 32.000 0.00 0.00 41.43 3.50
607 627 4.751767 AAGTGCAGTTTTGAATCCCAAA 57.248 36.364 0.00 0.00 42.56 3.28
608 628 4.751767 AAAGTGCAGTTTTGAATCCCAA 57.248 36.364 13.86 0.00 0.00 4.12
609 629 4.751767 AAAAGTGCAGTTTTGAATCCCA 57.248 36.364 27.29 0.00 0.00 4.37
610 630 7.279981 ACTTTAAAAAGTGCAGTTTTGAATCCC 59.720 33.333 28.26 0.00 46.80 3.85
611 631 8.196802 ACTTTAAAAAGTGCAGTTTTGAATCC 57.803 30.769 28.26 0.00 46.80 3.01
647 667 9.739276 TCAAGAATTATTGAAGGTGTATCAGTT 57.261 29.630 12.94 0.00 36.28 3.16
648 668 9.739276 TTCAAGAATTATTGAAGGTGTATCAGT 57.261 29.630 21.22 0.00 42.68 3.41
649 669 9.994432 GTTCAAGAATTATTGAAGGTGTATCAG 57.006 33.333 24.57 0.00 46.80 2.90
650 670 9.513906 TGTTCAAGAATTATTGAAGGTGTATCA 57.486 29.630 24.57 15.59 46.80 2.15
654 674 9.883142 TTTTTGTTCAAGAATTATTGAAGGTGT 57.117 25.926 24.57 0.00 46.80 4.16
658 678 9.853921 GCAGTTTTTGTTCAAGAATTATTGAAG 57.146 29.630 24.57 13.43 46.80 3.02
659 679 9.376075 TGCAGTTTTTGTTCAAGAATTATTGAA 57.624 25.926 21.22 21.22 44.72 2.69
660 680 8.939201 TGCAGTTTTTGTTCAAGAATTATTGA 57.061 26.923 11.38 11.38 37.41 2.57
661 681 8.819974 ACTGCAGTTTTTGTTCAAGAATTATTG 58.180 29.630 15.25 6.47 0.00 1.90
662 682 8.947055 ACTGCAGTTTTTGTTCAAGAATTATT 57.053 26.923 15.25 0.00 0.00 1.40
663 683 8.819974 CAACTGCAGTTTTTGTTCAAGAATTAT 58.180 29.630 29.23 0.00 35.83 1.28
664 684 7.816995 ACAACTGCAGTTTTTGTTCAAGAATTA 59.183 29.630 29.23 0.00 35.83 1.40
665 685 6.650390 ACAACTGCAGTTTTTGTTCAAGAATT 59.350 30.769 29.23 0.00 35.83 2.17
666 686 6.165577 ACAACTGCAGTTTTTGTTCAAGAAT 58.834 32.000 29.23 0.16 35.83 2.40
667 687 5.537188 ACAACTGCAGTTTTTGTTCAAGAA 58.463 33.333 29.23 0.00 35.83 2.52
668 688 5.132897 ACAACTGCAGTTTTTGTTCAAGA 57.867 34.783 29.23 0.00 35.83 3.02
669 689 6.942886 TTACAACTGCAGTTTTTGTTCAAG 57.057 33.333 29.23 16.49 35.83 3.02
670 690 6.926272 ACTTTACAACTGCAGTTTTTGTTCAA 59.074 30.769 29.23 18.03 35.83 2.69
671 691 6.451393 ACTTTACAACTGCAGTTTTTGTTCA 58.549 32.000 29.23 12.44 35.83 3.18
672 692 6.944557 ACTTTACAACTGCAGTTTTTGTTC 57.055 33.333 29.23 0.00 35.83 3.18
673 693 8.996024 ATAACTTTACAACTGCAGTTTTTGTT 57.004 26.923 29.23 25.65 35.83 2.83
677 697 9.946165 GTCTTATAACTTTACAACTGCAGTTTT 57.054 29.630 29.23 24.88 35.83 2.43
678 698 9.338622 AGTCTTATAACTTTACAACTGCAGTTT 57.661 29.630 29.23 21.02 35.83 2.66
679 699 8.904099 AGTCTTATAACTTTACAACTGCAGTT 57.096 30.769 26.36 26.36 39.12 3.16
680 700 9.991906 TTAGTCTTATAACTTTACAACTGCAGT 57.008 29.630 15.25 15.25 0.00 4.40
690 710 9.132521 GCGTGTCAGTTTAGTCTTATAACTTTA 57.867 33.333 0.00 0.00 30.08 1.85
691 711 7.117379 GGCGTGTCAGTTTAGTCTTATAACTTT 59.883 37.037 0.00 0.00 30.08 2.66
692 712 6.589139 GGCGTGTCAGTTTAGTCTTATAACTT 59.411 38.462 0.00 0.00 30.08 2.66
693 713 6.071503 AGGCGTGTCAGTTTAGTCTTATAACT 60.072 38.462 0.00 0.00 32.60 2.24
694 714 6.098017 AGGCGTGTCAGTTTAGTCTTATAAC 58.902 40.000 0.00 0.00 0.00 1.89
695 715 6.276832 AGGCGTGTCAGTTTAGTCTTATAA 57.723 37.500 0.00 0.00 0.00 0.98
696 716 5.909621 AGGCGTGTCAGTTTAGTCTTATA 57.090 39.130 0.00 0.00 0.00 0.98
697 717 4.803098 AGGCGTGTCAGTTTAGTCTTAT 57.197 40.909 0.00 0.00 0.00 1.73
698 718 4.082571 GGTAGGCGTGTCAGTTTAGTCTTA 60.083 45.833 0.00 0.00 0.00 2.10
699 719 3.305881 GGTAGGCGTGTCAGTTTAGTCTT 60.306 47.826 0.00 0.00 0.00 3.01
700 720 2.230750 GGTAGGCGTGTCAGTTTAGTCT 59.769 50.000 0.00 0.00 0.00 3.24
701 721 2.603953 GGTAGGCGTGTCAGTTTAGTC 58.396 52.381 0.00 0.00 0.00 2.59
702 722 1.068055 CGGTAGGCGTGTCAGTTTAGT 60.068 52.381 0.00 0.00 0.00 2.24
703 723 1.625616 CGGTAGGCGTGTCAGTTTAG 58.374 55.000 0.00 0.00 0.00 1.85
704 724 0.244450 CCGGTAGGCGTGTCAGTTTA 59.756 55.000 0.00 0.00 0.00 2.01
705 725 1.005394 CCGGTAGGCGTGTCAGTTT 60.005 57.895 0.00 0.00 0.00 2.66
706 726 1.874345 CTCCGGTAGGCGTGTCAGTT 61.874 60.000 0.00 0.00 37.47 3.16
707 727 2.282674 TCCGGTAGGCGTGTCAGT 60.283 61.111 0.00 0.00 37.47 3.41
708 728 1.874345 AACTCCGGTAGGCGTGTCAG 61.874 60.000 0.00 0.00 35.30 3.51
709 729 1.466025 AAACTCCGGTAGGCGTGTCA 61.466 55.000 0.00 0.00 35.30 3.58
710 730 0.320160 AAAACTCCGGTAGGCGTGTC 60.320 55.000 0.00 0.00 35.30 3.67
711 731 0.968405 TAAAACTCCGGTAGGCGTGT 59.032 50.000 0.00 0.00 35.30 4.49
712 732 1.636988 CTAAAACTCCGGTAGGCGTG 58.363 55.000 0.00 0.00 35.30 5.34
713 733 0.533951 CCTAAAACTCCGGTAGGCGT 59.466 55.000 0.00 0.00 36.97 5.68
714 734 0.819582 TCCTAAAACTCCGGTAGGCG 59.180 55.000 9.69 0.00 35.35 5.52
715 735 1.134580 GGTCCTAAAACTCCGGTAGGC 60.135 57.143 9.69 5.83 35.35 3.93
716 736 2.464782 AGGTCCTAAAACTCCGGTAGG 58.535 52.381 8.47 8.47 36.50 3.18
717 737 4.891756 TCATAGGTCCTAAAACTCCGGTAG 59.108 45.833 1.78 0.00 0.00 3.18
718 738 4.870636 TCATAGGTCCTAAAACTCCGGTA 58.129 43.478 1.78 0.00 0.00 4.02
719 739 3.716431 TCATAGGTCCTAAAACTCCGGT 58.284 45.455 1.78 0.00 0.00 5.28
720 740 4.632153 CATCATAGGTCCTAAAACTCCGG 58.368 47.826 1.78 0.00 0.00 5.14
721 741 4.058817 GCATCATAGGTCCTAAAACTCCG 58.941 47.826 1.78 0.00 0.00 4.63
722 742 5.036117 TGCATCATAGGTCCTAAAACTCC 57.964 43.478 1.78 0.00 0.00 3.85
723 743 7.573968 AAATGCATCATAGGTCCTAAAACTC 57.426 36.000 1.78 0.00 0.00 3.01
724 744 7.961326 AAAATGCATCATAGGTCCTAAAACT 57.039 32.000 1.78 0.00 0.00 2.66
725 745 8.903820 AGTAAAATGCATCATAGGTCCTAAAAC 58.096 33.333 1.78 0.00 0.00 2.43
726 746 9.120538 GAGTAAAATGCATCATAGGTCCTAAAA 57.879 33.333 1.78 0.00 0.00 1.52
727 747 8.494433 AGAGTAAAATGCATCATAGGTCCTAAA 58.506 33.333 1.78 0.00 0.00 1.85
728 748 8.034313 AGAGTAAAATGCATCATAGGTCCTAA 57.966 34.615 1.78 0.00 0.00 2.69
729 749 7.618019 AGAGTAAAATGCATCATAGGTCCTA 57.382 36.000 0.00 0.00 0.00 2.94
730 750 6.506538 AGAGTAAAATGCATCATAGGTCCT 57.493 37.500 0.00 0.00 0.00 3.85
731 751 8.150945 TCTAAGAGTAAAATGCATCATAGGTCC 58.849 37.037 0.00 0.00 0.00 4.46
732 752 9.547753 TTCTAAGAGTAAAATGCATCATAGGTC 57.452 33.333 0.00 0.00 0.00 3.85
733 753 9.905713 TTTCTAAGAGTAAAATGCATCATAGGT 57.094 29.630 0.00 0.00 0.00 3.08
741 761 9.539825 TGCAAATTTTTCTAAGAGTAAAATGCA 57.460 25.926 11.99 11.99 37.74 3.96
759 779 9.528018 TCGAAGAAAATAAGAAGTTGCAAATTT 57.472 25.926 14.04 6.17 0.00 1.82
760 780 9.185192 CTCGAAGAAAATAAGAAGTTGCAAATT 57.815 29.630 12.63 12.63 34.09 1.82
761 781 7.809806 CCTCGAAGAAAATAAGAAGTTGCAAAT 59.190 33.333 0.00 0.00 34.09 2.32
768 788 9.892130 ATATTGACCTCGAAGAAAATAAGAAGT 57.108 29.630 0.00 0.00 34.09 3.01
784 804 9.965824 TTTTTCTTTTCTGTGAATATTGACCTC 57.034 29.630 2.44 0.00 0.00 3.85
793 813 6.753744 GTGCTGAGTTTTTCTTTTCTGTGAAT 59.246 34.615 0.00 0.00 0.00 2.57
794 814 6.092748 GTGCTGAGTTTTTCTTTTCTGTGAA 58.907 36.000 0.00 0.00 0.00 3.18
797 817 4.438744 CGGTGCTGAGTTTTTCTTTTCTGT 60.439 41.667 0.00 0.00 0.00 3.41
854 888 1.674057 CTGACAGGTGGGACAGACC 59.326 63.158 0.00 0.00 41.80 3.85
1140 1192 2.043752 TCGACGGTGGAGGCCATA 60.044 61.111 5.01 0.00 35.28 2.74
1170 1222 1.292223 CTTGGCGAAGTCGGAGGAA 59.708 57.895 0.00 0.00 40.23 3.36
1404 1456 2.669113 CGCCATTCAACACCATCAACAG 60.669 50.000 0.00 0.00 0.00 3.16
1442 1494 2.035066 GCAAGCTCAACTGAACCAATGT 59.965 45.455 0.00 0.00 0.00 2.71
1482 1534 7.659186 ACGCTCTTATATAAGTTTACAGAGGG 58.341 38.462 19.58 17.28 42.53 4.30
1483 1535 9.530633 AAACGCTCTTATATAAGTTTACAGAGG 57.469 33.333 19.58 9.13 34.93 3.69
1498 1550 9.953697 CTAAAGTAGTGATCTAAACGCTCTTAT 57.046 33.333 0.00 0.00 0.00 1.73
1499 1551 8.954350 ACTAAAGTAGTGATCTAAACGCTCTTA 58.046 33.333 0.00 0.00 37.69 2.10
1500 1552 7.828712 ACTAAAGTAGTGATCTAAACGCTCTT 58.171 34.615 0.00 0.00 37.69 2.85
1501 1553 7.393841 ACTAAAGTAGTGATCTAAACGCTCT 57.606 36.000 0.00 0.00 37.69 4.09
1502 1554 9.733219 AATACTAAAGTAGTGATCTAAACGCTC 57.267 33.333 0.00 0.00 39.81 5.03
1503 1555 9.733219 GAATACTAAAGTAGTGATCTAAACGCT 57.267 33.333 0.00 0.00 39.81 5.07
1504 1556 9.733219 AGAATACTAAAGTAGTGATCTAAACGC 57.267 33.333 0.00 0.00 39.81 4.84
1510 1562 9.733219 GCGTTTAGAATACTAAAGTAGTGATCT 57.267 33.333 0.00 4.67 45.42 2.75
1511 1563 9.733219 AGCGTTTAGAATACTAAAGTAGTGATC 57.267 33.333 0.00 0.00 45.42 2.92
1512 1564 9.733219 GAGCGTTTAGAATACTAAAGTAGTGAT 57.267 33.333 0.00 0.00 45.42 3.06
1513 1565 8.954350 AGAGCGTTTAGAATACTAAAGTAGTGA 58.046 33.333 0.00 0.00 45.42 3.41
1528 1580 9.669353 CCGTAAACTAATATAAGAGCGTTTAGA 57.331 33.333 0.00 0.00 30.36 2.10
1529 1581 9.669353 TCCGTAAACTAATATAAGAGCGTTTAG 57.331 33.333 0.00 0.00 30.36 1.85
1530 1582 9.669353 CTCCGTAAACTAATATAAGAGCGTTTA 57.331 33.333 0.00 0.00 0.00 2.01
1531 1583 7.650903 CCTCCGTAAACTAATATAAGAGCGTTT 59.349 37.037 0.00 0.00 0.00 3.60
1532 1584 7.144000 CCTCCGTAAACTAATATAAGAGCGTT 58.856 38.462 0.00 0.00 0.00 4.84
1533 1585 6.294397 CCCTCCGTAAACTAATATAAGAGCGT 60.294 42.308 0.00 0.00 0.00 5.07
1534 1586 6.072286 TCCCTCCGTAAACTAATATAAGAGCG 60.072 42.308 0.00 0.00 0.00 5.03
1535 1587 7.039853 ACTCCCTCCGTAAACTAATATAAGAGC 60.040 40.741 0.00 0.00 0.00 4.09
1536 1588 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
1537 1589 9.289782 GTACTCCCTCCGTAAACTAATATAAGA 57.710 37.037 0.00 0.00 0.00 2.10
1538 1590 9.294614 AGTACTCCCTCCGTAAACTAATATAAG 57.705 37.037 0.00 0.00 0.00 1.73
1539 1591 9.646522 AAGTACTCCCTCCGTAAACTAATATAA 57.353 33.333 0.00 0.00 0.00 0.98
1541 1593 9.819754 ATAAGTACTCCCTCCGTAAACTAATAT 57.180 33.333 0.00 0.00 0.00 1.28
1542 1594 9.646522 AATAAGTACTCCCTCCGTAAACTAATA 57.353 33.333 0.00 0.00 0.00 0.98
1543 1595 8.544687 AATAAGTACTCCCTCCGTAAACTAAT 57.455 34.615 0.00 0.00 0.00 1.73
1544 1596 7.961326 AATAAGTACTCCCTCCGTAAACTAA 57.039 36.000 0.00 0.00 0.00 2.24
1545 1597 9.474313 TTTAATAAGTACTCCCTCCGTAAACTA 57.526 33.333 0.00 0.00 0.00 2.24
1546 1598 7.961326 TTAATAAGTACTCCCTCCGTAAACT 57.039 36.000 0.00 0.00 0.00 2.66
1549 1601 8.860088 GGTATTTAATAAGTACTCCCTCCGTAA 58.140 37.037 0.00 0.00 0.00 3.18
1551 1603 6.015940 CGGTATTTAATAAGTACTCCCTCCGT 60.016 42.308 0.00 0.00 0.00 4.69
1555 1607 6.325804 ACTGCGGTATTTAATAAGTACTCCCT 59.674 38.462 0.00 0.00 0.00 4.20
1563 1615 9.807386 GCACTTATTACTGCGGTATTTAATAAG 57.193 33.333 24.47 24.47 34.48 1.73
1564 1616 9.327628 TGCACTTATTACTGCGGTATTTAATAA 57.672 29.630 6.15 8.46 36.08 1.40
1709 3033 8.777865 TCAGAATCAGAATGTCGTTAATTCTT 57.222 30.769 7.09 0.00 41.39 2.52
1724 3048 5.449725 CGTGCTTGTCTAGATCAGAATCAGA 60.450 44.000 0.00 0.00 34.17 3.27
2149 3505 0.179089 GATCACATCTGCTCCACGCT 60.179 55.000 0.00 0.00 40.11 5.07
2319 3684 1.463056 TGCGCCTATTTTTGACAGTCG 59.537 47.619 4.18 0.00 0.00 4.18
2325 3691 3.376859 CACACCTATGCGCCTATTTTTGA 59.623 43.478 4.18 0.00 0.00 2.69
2334 3700 1.884926 GAGCTCACACCTATGCGCC 60.885 63.158 9.40 0.00 0.00 6.53
2385 3751 4.539083 ACGCCACGCCTTGTCACA 62.539 61.111 0.00 0.00 0.00 3.58
2412 3788 2.125512 GCGCACTCCTCCGTCAAT 60.126 61.111 0.30 0.00 0.00 2.57
2413 3789 4.717629 CGCGCACTCCTCCGTCAA 62.718 66.667 8.75 0.00 0.00 3.18
2672 4075 3.699411 TTGCCAAATAAGCCAGCAAAT 57.301 38.095 0.00 0.00 40.26 2.32
2834 4253 2.834549 GTCCAACTCCTCTCCATCTTCA 59.165 50.000 0.00 0.00 0.00 3.02
3036 4897 1.609072 GCCCAACTGTCAGAAAACTCC 59.391 52.381 6.91 0.00 0.00 3.85
3051 4912 0.953471 CGTCTCAAATCGTGGCCCAA 60.953 55.000 0.00 0.00 0.00 4.12
3072 4937 2.662596 GTGACAGCCCACGATCCA 59.337 61.111 0.00 0.00 0.00 3.41
3211 5077 1.526917 AGCAGCAGCAAAGGAACGT 60.527 52.632 3.17 0.00 45.49 3.99
3237 5107 2.797278 GCGGACGGGATGGAGTCAT 61.797 63.158 0.00 0.00 39.01 3.06
3315 5185 1.987080 AACCTATTTGCCCCTCTCCT 58.013 50.000 0.00 0.00 0.00 3.69
3562 5498 8.909923 TCTACACATAATGCTAGTACTGCTAAA 58.090 33.333 5.39 0.00 0.00 1.85
3624 5561 9.087424 CAGAATTAACGACATACTGATTCTGAA 57.913 33.333 14.67 0.00 45.80 3.02
3714 5666 7.970102 AGAACTTTCCCACAAAGTGTATACTA 58.030 34.615 4.17 0.00 40.10 1.82
3726 5678 4.136796 CAACATCTGAGAACTTTCCCACA 58.863 43.478 0.00 0.00 0.00 4.17
3843 5798 2.095364 CACTCCAAAATGCTGACAGCTC 60.095 50.000 26.94 0.92 42.97 4.09
4195 6232 9.384764 ACCGTTCAAAAGAAAATTTAAAATCCA 57.615 25.926 0.00 0.00 0.00 3.41
4295 6335 1.065410 TTGGGCAGGGTCCAGAGAAA 61.065 55.000 0.00 0.00 39.05 2.52
4366 6406 4.337555 AGCATTAATGAATGACAGGTGCTC 59.662 41.667 19.73 0.00 44.59 4.26
4552 6592 8.776376 AATTGAACCAATGATTCCAAATACAC 57.224 30.769 0.00 0.00 34.04 2.90
4643 6683 6.407475 AAACATGCACTTGTCAAAACTTTC 57.593 33.333 0.00 0.00 0.00 2.62
4981 7030 3.760693 GCCCTCTGCGAAACTATGA 57.239 52.632 0.00 0.00 0.00 2.15
5004 7053 3.494398 CGCCAATAAGCCTACCACTACAT 60.494 47.826 0.00 0.00 0.00 2.29
5200 7249 7.622713 TCATATACCCGTTCAAAAGAACCTAA 58.377 34.615 3.07 0.00 0.00 2.69
5370 7427 1.897398 CTGTAACCGTGCTGCCGTTC 61.897 60.000 0.00 0.00 0.00 3.95
5374 7431 1.165270 AATTCTGTAACCGTGCTGCC 58.835 50.000 0.00 0.00 0.00 4.85
5419 7476 9.409312 CAACATGAATGTAAGATTACAGCAAAA 57.591 29.630 10.85 0.00 45.80 2.44
5578 7636 6.965500 CAGAGCAAATCACACATCTTGTATTC 59.035 38.462 0.00 0.00 35.67 1.75
5637 7695 4.943705 GGATTTGATCATGTACCACACAGT 59.056 41.667 0.00 0.00 41.51 3.55
5644 7702 5.779529 AATGCAGGATTTGATCATGTACC 57.220 39.130 0.00 0.00 42.63 3.34
5797 7954 1.007387 GCAACGTGAAAAGCCCTGG 60.007 57.895 0.00 0.00 0.00 4.45
5833 7990 4.383602 CACTTGGCGCGAAACCCG 62.384 66.667 12.10 0.00 42.21 5.28
6087 8263 0.671781 CTGCTTCGGAGAACAGGGTG 60.672 60.000 0.00 0.00 45.90 4.61
6091 8267 0.246086 AGCTCTGCTTCGGAGAACAG 59.754 55.000 0.00 0.00 45.90 3.16
6099 8275 2.007360 ACAGATCAAGCTCTGCTTCG 57.993 50.000 1.45 0.00 46.77 3.79
6145 8321 6.456447 AAACAAGTTGAAATCATTGATGCG 57.544 33.333 10.54 0.00 0.00 4.73
6160 8336 7.432148 AGGGGAAAATGAACTAAAACAAGTT 57.568 32.000 0.00 0.00 42.36 2.66
6180 8356 3.239449 GGCAATTTATAAGGGGAAGGGG 58.761 50.000 0.00 0.00 0.00 4.79
6219 8395 9.027129 CAATTGATAATGTCATTTGTCATCCAC 57.973 33.333 2.79 0.00 40.64 4.02
6391 8569 6.823689 GGAGCATGAATTACTTCCAACTCTTA 59.176 38.462 0.00 0.00 0.00 2.10
6442 8620 2.888414 GCTCCCTCTGTACACCTAGATC 59.112 54.545 0.00 0.00 0.00 2.75
6546 8758 4.368543 GCCTTGTGCCTTGCCAGC 62.369 66.667 0.00 0.00 0.00 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.