Multiple sequence alignment - TraesCS5D01G226300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G226300 chr5D 100.000 8129 0 0 1 8129 334409797 334401669 0.000000e+00 15012.0
1 TraesCS5D01G226300 chr5D 84.512 1414 200 12 3106 4503 334305766 334304356 0.000000e+00 1380.0
2 TraesCS5D01G226300 chr5D 82.877 1314 204 16 3172 4470 334260782 334259475 0.000000e+00 1160.0
3 TraesCS5D01G226300 chr5D 82.372 1231 175 29 5112 6326 334258784 334257580 0.000000e+00 1033.0
4 TraesCS5D01G226300 chr5D 82.270 1207 161 36 5114 6303 334303572 334302402 0.000000e+00 994.0
5 TraesCS5D01G226300 chr5D 83.983 949 131 15 6380 7310 334302350 334301405 0.000000e+00 891.0
6 TraesCS5D01G226300 chr5D 86.552 290 33 5 1028 1313 334307025 334306738 1.700000e-81 315.0
7 TraesCS5D01G226300 chr5B 95.346 4813 173 23 2663 7453 391448508 391443725 0.000000e+00 7600.0
8 TraesCS5D01G226300 chr5B 83.954 1396 211 10 3108 4493 391302632 391301240 0.000000e+00 1325.0
9 TraesCS5D01G226300 chr5B 82.927 1312 204 16 3172 4470 391150286 391148982 0.000000e+00 1164.0
10 TraesCS5D01G226300 chr5B 84.692 1104 160 8 1357 2455 678873436 678872337 0.000000e+00 1094.0
11 TraesCS5D01G226300 chr5B 82.122 1225 181 29 5112 6317 391148167 391146962 0.000000e+00 1014.0
12 TraesCS5D01G226300 chr5B 83.880 1098 134 32 5115 6206 391301159 391300099 0.000000e+00 1007.0
13 TraesCS5D01G226300 chr5B 85.474 950 116 17 6379 7310 391299806 391298861 0.000000e+00 970.0
14 TraesCS5D01G226300 chr5B 91.667 312 15 2 1039 1347 391454471 391454168 9.750000e-114 422.0
15 TraesCS5D01G226300 chr5B 87.843 255 25 3 1053 1301 391303606 391303352 2.220000e-75 294.0
16 TraesCS5D01G226300 chr5B 93.000 100 6 1 2482 2581 391454149 391454051 2.360000e-30 145.0
17 TraesCS5D01G226300 chr5A 94.545 3098 133 10 5031 8098 436178236 436175145 0.000000e+00 4752.0
18 TraesCS5D01G226300 chr5A 90.553 2551 153 44 2484 5016 436180700 436178220 0.000000e+00 3295.0
19 TraesCS5D01G226300 chr5A 84.023 1402 203 12 3109 4493 436107437 436106040 0.000000e+00 1328.0
20 TraesCS5D01G226300 chr5A 82.595 1310 207 16 3175 4470 436094804 436093502 0.000000e+00 1136.0
21 TraesCS5D01G226300 chr5A 82.516 1224 179 26 5112 6317 436092682 436091476 0.000000e+00 1042.0
22 TraesCS5D01G226300 chr5A 81.757 1184 158 35 5116 6284 436105226 436104086 0.000000e+00 937.0
23 TraesCS5D01G226300 chr5A 84.227 951 131 13 6378 7310 436104009 436103060 0.000000e+00 907.0
24 TraesCS5D01G226300 chr5A 80.710 648 27 28 372 953 436181803 436181188 1.630000e-111 414.0
25 TraesCS5D01G226300 chr5A 89.752 322 24 4 1001 1313 436181115 436180794 3.530000e-108 403.0
26 TraesCS5D01G226300 chr5A 87.410 278 28 4 1039 1309 436108411 436108134 6.130000e-81 313.0
27 TraesCS5D01G226300 chr5A 86.792 53 6 1 8077 8128 449349427 449349375 3.170000e-04 58.4
28 TraesCS5D01G226300 chr7B 94.751 1105 56 2 1355 2457 28677128 28676024 0.000000e+00 1718.0
29 TraesCS5D01G226300 chr7B 87.273 55 3 4 8077 8128 208993652 208993705 8.810000e-05 60.2
30 TraesCS5D01G226300 chr2B 94.631 1099 57 2 1358 2455 309226175 309225078 0.000000e+00 1701.0
31 TraesCS5D01G226300 chr2B 85.377 1101 155 3 1356 2455 523758627 523757532 0.000000e+00 1136.0
32 TraesCS5D01G226300 chr2B 91.489 47 1 3 8083 8128 541251645 541251601 2.450000e-05 62.1
33 TraesCS5D01G226300 chr3D 89.671 1065 106 3 1393 2455 272500289 272499227 0.000000e+00 1354.0
34 TraesCS5D01G226300 chr3D 97.436 39 1 0 8090 8128 416829951 416829989 5.270000e-07 67.6
35 TraesCS5D01G226300 chr1B 85.727 1100 152 5 1356 2452 5785640 5786737 0.000000e+00 1157.0
36 TraesCS5D01G226300 chr6B 85.490 1082 156 1 1372 2452 669499994 669501075 0.000000e+00 1127.0
37 TraesCS5D01G226300 chr6B 85.104 1101 159 5 1358 2455 25035080 25033982 0.000000e+00 1120.0
38 TraesCS5D01G226300 chr6B 93.023 43 1 2 8086 8128 694275516 694275476 2.450000e-05 62.1
39 TraesCS5D01G226300 chr4A 84.455 1100 166 5 1359 2455 698294196 698293099 0.000000e+00 1079.0
40 TraesCS5D01G226300 chr4D 100.000 36 0 0 8093 8128 279317550 279317515 5.270000e-07 67.6
41 TraesCS5D01G226300 chr4B 89.286 56 0 4 8076 8128 71035169 71035221 1.890000e-06 65.8
42 TraesCS5D01G226300 chr2A 93.023 43 2 1 8086 8128 545462822 545462863 2.450000e-05 62.1
43 TraesCS5D01G226300 chr6A 84.746 59 6 3 8071 8128 485784419 485784475 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G226300 chr5D 334401669 334409797 8128 True 15012.00 15012 100.00000 1 8129 1 chr5D.!!$R1 8128
1 TraesCS5D01G226300 chr5D 334257580 334260782 3202 True 1096.50 1160 82.62450 3172 6326 2 chr5D.!!$R2 3154
2 TraesCS5D01G226300 chr5D 334301405 334307025 5620 True 895.00 1380 84.32925 1028 7310 4 chr5D.!!$R3 6282
3 TraesCS5D01G226300 chr5B 391443725 391448508 4783 True 7600.00 7600 95.34600 2663 7453 1 chr5B.!!$R1 4790
4 TraesCS5D01G226300 chr5B 678872337 678873436 1099 True 1094.00 1094 84.69200 1357 2455 1 chr5B.!!$R2 1098
5 TraesCS5D01G226300 chr5B 391146962 391150286 3324 True 1089.00 1164 82.52450 3172 6317 2 chr5B.!!$R3 3145
6 TraesCS5D01G226300 chr5B 391298861 391303606 4745 True 899.00 1325 85.28775 1053 7310 4 chr5B.!!$R4 6257
7 TraesCS5D01G226300 chr5A 436175145 436181803 6658 True 2216.00 4752 88.89000 372 8098 4 chr5A.!!$R4 7726
8 TraesCS5D01G226300 chr5A 436091476 436094804 3328 True 1089.00 1136 82.55550 3175 6317 2 chr5A.!!$R2 3142
9 TraesCS5D01G226300 chr5A 436103060 436108411 5351 True 871.25 1328 84.35425 1039 7310 4 chr5A.!!$R3 6271
10 TraesCS5D01G226300 chr7B 28676024 28677128 1104 True 1718.00 1718 94.75100 1355 2457 1 chr7B.!!$R1 1102
11 TraesCS5D01G226300 chr2B 309225078 309226175 1097 True 1701.00 1701 94.63100 1358 2455 1 chr2B.!!$R1 1097
12 TraesCS5D01G226300 chr2B 523757532 523758627 1095 True 1136.00 1136 85.37700 1356 2455 1 chr2B.!!$R2 1099
13 TraesCS5D01G226300 chr3D 272499227 272500289 1062 True 1354.00 1354 89.67100 1393 2455 1 chr3D.!!$R1 1062
14 TraesCS5D01G226300 chr1B 5785640 5786737 1097 False 1157.00 1157 85.72700 1356 2452 1 chr1B.!!$F1 1096
15 TraesCS5D01G226300 chr6B 669499994 669501075 1081 False 1127.00 1127 85.49000 1372 2452 1 chr6B.!!$F1 1080
16 TraesCS5D01G226300 chr6B 25033982 25035080 1098 True 1120.00 1120 85.10400 1358 2455 1 chr6B.!!$R1 1097
17 TraesCS5D01G226300 chr4A 698293099 698294196 1097 True 1079.00 1079 84.45500 1359 2455 1 chr4A.!!$R1 1096

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
168 169 0.029834 GCACATGATTGGATGACCGC 59.970 55.0 0.00 0.00 39.42 5.68 F
200 201 0.034198 TCTCGGCGAACACATCCAAA 59.966 50.0 12.13 0.00 0.00 3.28 F
264 265 0.036952 AGTAGCTTGTGCGCATGACT 60.037 50.0 15.91 11.88 45.42 3.41 F
266 267 0.037419 TAGCTTGTGCGCATGACTGA 60.037 50.0 15.91 0.00 45.42 3.41 F
362 363 0.037447 GCCTCCCTTGCTCTGAAGTT 59.963 55.0 0.00 0.00 0.00 2.66 F
951 1019 0.037697 CTAGCTGGCGTACAACCACA 60.038 55.0 0.00 0.00 32.49 4.17 F
1350 1470 0.040958 CGTTCAAACTGAGCAGGCAC 60.041 55.0 2.20 0.00 0.00 5.01 F
2513 2674 0.108329 GGGCCGAACGATCTTCTGAA 60.108 55.0 0.00 0.00 0.00 3.02 F
2865 3113 0.042581 TGGCAGGGGAGACATCAGTA 59.957 55.0 0.00 0.00 0.00 2.74 F
3346 3656 0.387929 TCCATACTTCATCCGGACGC 59.612 55.0 6.12 0.00 0.00 5.19 F
3348 3658 0.389391 CATACTTCATCCGGACGCCT 59.611 55.0 6.12 0.00 0.00 5.52 F
5190 6271 0.673644 ATCTTGGCCAACCGTTCTCG 60.674 55.0 16.05 1.92 39.70 4.04 F
6405 7677 0.169672 CAAGGGCTTGCGTGAATGAG 59.830 55.0 0.00 0.00 33.45 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1186 1303 0.321122 AAGTCCTCGAAAGCCAGCTG 60.321 55.000 6.78 6.78 0.00 4.24 R
1195 1312 0.674581 TCGGCGTAGAAGTCCTCGAA 60.675 55.000 6.85 0.00 0.00 3.71 R
1788 1946 1.451747 GAGGACGAGGAGTAGCGGT 60.452 63.158 0.00 0.00 0.00 5.68 R
1830 1988 5.609483 CGGCTTTGTTTTTCAAGATAAACGC 60.609 40.000 10.18 8.06 35.80 4.84 R
2295 2455 6.099269 ACCATCGAAGCTAGGGTTTTTCTATA 59.901 38.462 0.00 0.00 0.00 1.31 R
2846 3050 0.042581 TACTGATGTCTCCCCTGCCA 59.957 55.000 0.00 0.00 0.00 4.92 R
2847 3051 0.755686 CTACTGATGTCTCCCCTGCC 59.244 60.000 0.00 0.00 0.00 4.85 R
3507 3820 2.175069 AGCTGAAGGATGGATCTTGCAT 59.825 45.455 0.00 0.00 0.00 3.96 R
4385 4716 3.682858 GTCTGCAAACGGCTTATAGTGAA 59.317 43.478 0.00 0.00 45.15 3.18 R
5110 6189 6.024049 GCAACACATATAAAGTGAGTTGAGC 58.976 40.000 16.65 3.02 45.11 4.26 R
5395 6476 0.321346 CCAACCCAATTTGACTGCCC 59.679 55.000 0.00 0.00 0.00 5.36 R
6662 7939 0.038801 GCTGCTTGAAGTTTGGGAGC 60.039 55.000 0.00 0.00 36.17 4.70 R
8105 9428 0.331616 AACCACCCAGGGATAGTTGC 59.668 55.000 14.54 0.00 43.89 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 2.119801 ATCTGCATATTGCCGATCCC 57.880 50.000 1.20 0.00 42.36 3.85
24 25 0.320683 TCTGCATATTGCCGATCCCG 60.321 55.000 0.00 0.00 44.23 5.14
25 26 0.320683 CTGCATATTGCCGATCCCGA 60.321 55.000 0.00 0.00 44.23 5.14
26 27 0.602638 TGCATATTGCCGATCCCGAC 60.603 55.000 0.00 0.00 44.23 4.79
27 28 0.602638 GCATATTGCCGATCCCGACA 60.603 55.000 0.00 0.00 37.42 4.35
28 29 1.877637 CATATTGCCGATCCCGACAA 58.122 50.000 0.00 0.00 42.01 3.18
29 30 2.217750 CATATTGCCGATCCCGACAAA 58.782 47.619 0.00 0.00 41.21 2.83
30 31 1.948104 TATTGCCGATCCCGACAAAG 58.052 50.000 0.00 0.00 41.21 2.77
31 32 0.251916 ATTGCCGATCCCGACAAAGA 59.748 50.000 0.00 0.00 41.21 2.52
32 33 0.391130 TTGCCGATCCCGACAAAGAG 60.391 55.000 0.00 0.00 35.31 2.85
33 34 1.218316 GCCGATCCCGACAAAGAGT 59.782 57.895 0.00 0.00 38.22 3.24
34 35 0.458669 GCCGATCCCGACAAAGAGTA 59.541 55.000 0.00 0.00 38.22 2.59
35 36 1.536284 GCCGATCCCGACAAAGAGTAG 60.536 57.143 0.00 0.00 38.22 2.57
36 37 1.067212 CCGATCCCGACAAAGAGTAGG 59.933 57.143 0.00 0.00 42.16 3.18
37 38 2.022195 CGATCCCGACAAAGAGTAGGA 58.978 52.381 0.00 0.00 45.00 2.94
38 39 2.223525 CGATCCCGACAAAGAGTAGGAC 60.224 54.545 0.00 0.00 45.00 3.85
39 40 1.171308 TCCCGACAAAGAGTAGGACG 58.829 55.000 0.00 0.00 45.00 4.79
40 41 0.886563 CCCGACAAAGAGTAGGACGT 59.113 55.000 0.00 0.00 45.00 4.34
41 42 1.402456 CCCGACAAAGAGTAGGACGTG 60.402 57.143 0.00 0.00 45.00 4.49
42 43 1.402456 CCGACAAAGAGTAGGACGTGG 60.402 57.143 0.00 0.00 45.00 4.94
43 44 1.402456 CGACAAAGAGTAGGACGTGGG 60.402 57.143 0.00 0.00 0.00 4.61
44 45 1.891150 GACAAAGAGTAGGACGTGGGA 59.109 52.381 0.00 0.00 0.00 4.37
45 46 1.617357 ACAAAGAGTAGGACGTGGGAC 59.383 52.381 0.00 0.00 0.00 4.46
46 47 1.616865 CAAAGAGTAGGACGTGGGACA 59.383 52.381 0.00 0.00 0.00 4.02
57 58 3.557220 TGGGACACGTGACCACAT 58.443 55.556 32.48 6.59 0.00 3.21
58 59 1.369692 TGGGACACGTGACCACATC 59.630 57.895 32.48 18.66 0.00 3.06
59 60 1.736645 GGGACACGTGACCACATCG 60.737 63.158 32.48 0.68 0.00 3.84
60 61 1.736645 GGACACGTGACCACATCGG 60.737 63.158 28.38 0.00 42.50 4.18
61 62 1.287815 GACACGTGACCACATCGGA 59.712 57.895 25.01 0.00 38.63 4.55
62 63 1.006571 ACACGTGACCACATCGGAC 60.007 57.895 25.01 0.00 38.63 4.79
63 64 1.006688 CACGTGACCACATCGGACA 60.007 57.895 10.90 0.00 37.08 4.02
64 65 0.598942 CACGTGACCACATCGGACAA 60.599 55.000 10.90 0.00 41.28 3.18
65 66 0.105224 ACGTGACCACATCGGACAAA 59.895 50.000 0.00 0.00 41.28 2.83
66 67 1.222300 CGTGACCACATCGGACAAAA 58.778 50.000 0.85 0.00 41.28 2.44
67 68 1.600013 CGTGACCACATCGGACAAAAA 59.400 47.619 0.85 0.00 41.28 1.94
68 69 2.349438 CGTGACCACATCGGACAAAAAG 60.349 50.000 0.85 0.00 41.28 2.27
69 70 2.616842 GTGACCACATCGGACAAAAAGT 59.383 45.455 0.00 0.00 41.28 2.66
70 71 3.810941 GTGACCACATCGGACAAAAAGTA 59.189 43.478 0.00 0.00 41.28 2.24
71 72 4.062293 TGACCACATCGGACAAAAAGTAG 58.938 43.478 0.00 0.00 36.44 2.57
72 73 4.202274 TGACCACATCGGACAAAAAGTAGA 60.202 41.667 0.00 0.00 36.44 2.59
73 74 4.062991 ACCACATCGGACAAAAAGTAGAC 58.937 43.478 0.00 0.00 38.63 2.59
74 75 3.122948 CCACATCGGACAAAAAGTAGACG 59.877 47.826 0.00 0.00 36.56 4.18
75 76 3.985279 CACATCGGACAAAAAGTAGACGA 59.015 43.478 0.00 0.00 36.08 4.20
76 77 4.090066 CACATCGGACAAAAAGTAGACGAG 59.910 45.833 0.00 0.00 35.44 4.18
77 78 4.022589 ACATCGGACAAAAAGTAGACGAGA 60.023 41.667 0.00 0.00 35.44 4.04
78 79 3.893720 TCGGACAAAAAGTAGACGAGAC 58.106 45.455 0.00 0.00 0.00 3.36
79 80 3.567164 TCGGACAAAAAGTAGACGAGACT 59.433 43.478 0.00 0.00 0.00 3.24
80 81 3.913163 CGGACAAAAAGTAGACGAGACTC 59.087 47.826 0.00 0.00 0.00 3.36
81 82 3.913163 GGACAAAAAGTAGACGAGACTCG 59.087 47.826 22.97 22.97 46.93 4.18
82 83 3.898529 ACAAAAAGTAGACGAGACTCGG 58.101 45.455 27.39 10.77 45.59 4.63
83 84 3.567164 ACAAAAAGTAGACGAGACTCGGA 59.433 43.478 27.39 10.66 45.59 4.55
84 85 4.217983 ACAAAAAGTAGACGAGACTCGGAT 59.782 41.667 27.39 17.62 45.59 4.18
85 86 4.619437 AAAAGTAGACGAGACTCGGATC 57.381 45.455 27.39 17.04 45.59 3.36
86 87 2.243602 AGTAGACGAGACTCGGATCC 57.756 55.000 27.39 13.73 45.59 3.36
87 88 1.764134 AGTAGACGAGACTCGGATCCT 59.236 52.381 27.39 19.17 45.59 3.24
88 89 2.171027 AGTAGACGAGACTCGGATCCTT 59.829 50.000 27.39 6.46 45.59 3.36
89 90 2.131776 AGACGAGACTCGGATCCTTT 57.868 50.000 27.39 5.70 45.59 3.11
90 91 2.448453 AGACGAGACTCGGATCCTTTT 58.552 47.619 27.39 4.94 45.59 2.27
91 92 2.164624 AGACGAGACTCGGATCCTTTTG 59.835 50.000 27.39 0.00 45.59 2.44
92 93 1.281899 CGAGACTCGGATCCTTTTGC 58.718 55.000 17.27 0.00 36.00 3.68
93 94 1.134965 CGAGACTCGGATCCTTTTGCT 60.135 52.381 17.27 0.35 36.00 3.91
94 95 2.099263 CGAGACTCGGATCCTTTTGCTA 59.901 50.000 17.27 0.00 36.00 3.49
95 96 3.449632 GAGACTCGGATCCTTTTGCTAC 58.550 50.000 10.75 0.00 0.00 3.58
96 97 2.159226 AGACTCGGATCCTTTTGCTACG 60.159 50.000 10.75 0.00 0.00 3.51
97 98 1.549170 ACTCGGATCCTTTTGCTACGT 59.451 47.619 10.75 0.00 0.00 3.57
98 99 2.756760 ACTCGGATCCTTTTGCTACGTA 59.243 45.455 10.75 0.00 0.00 3.57
99 100 3.194116 ACTCGGATCCTTTTGCTACGTAA 59.806 43.478 10.75 0.00 0.00 3.18
100 101 4.178540 CTCGGATCCTTTTGCTACGTAAA 58.821 43.478 10.75 0.00 0.00 2.01
101 102 4.567971 TCGGATCCTTTTGCTACGTAAAA 58.432 39.130 10.75 0.00 0.00 1.52
102 103 4.628333 TCGGATCCTTTTGCTACGTAAAAG 59.372 41.667 10.75 12.93 42.12 2.27
103 104 4.390909 CGGATCCTTTTGCTACGTAAAAGT 59.609 41.667 16.75 3.94 41.35 2.66
104 105 5.577945 CGGATCCTTTTGCTACGTAAAAGTA 59.422 40.000 16.75 5.76 41.35 2.24
105 106 6.091169 CGGATCCTTTTGCTACGTAAAAGTAA 59.909 38.462 16.75 8.29 41.35 2.24
106 107 7.201582 CGGATCCTTTTGCTACGTAAAAGTAAT 60.202 37.037 16.75 11.52 41.35 1.89
107 108 8.121086 GGATCCTTTTGCTACGTAAAAGTAATC 58.879 37.037 16.75 16.76 41.35 1.75
108 109 7.368480 TCCTTTTGCTACGTAAAAGTAATCC 57.632 36.000 16.75 0.00 41.35 3.01
109 110 6.935771 TCCTTTTGCTACGTAAAAGTAATCCA 59.064 34.615 16.75 0.00 41.35 3.41
110 111 7.444792 TCCTTTTGCTACGTAAAAGTAATCCAA 59.555 33.333 16.75 0.00 41.35 3.53
111 112 7.536281 CCTTTTGCTACGTAAAAGTAATCCAAC 59.464 37.037 16.75 0.00 41.35 3.77
112 113 7.733402 TTTGCTACGTAAAAGTAATCCAACT 57.267 32.000 0.00 0.00 0.00 3.16
113 114 8.830201 TTTGCTACGTAAAAGTAATCCAACTA 57.170 30.769 0.00 0.00 0.00 2.24
114 115 9.439500 TTTGCTACGTAAAAGTAATCCAACTAT 57.561 29.630 0.00 0.00 0.00 2.12
115 116 9.439500 TTGCTACGTAAAAGTAATCCAACTATT 57.561 29.630 0.00 0.00 0.00 1.73
133 134 9.626045 CCAACTATTAATGAAAGTCAGTTTTCC 57.374 33.333 0.00 0.00 36.46 3.13
141 142 7.888250 ATGAAAGTCAGTTTTCCTCTTTTCT 57.112 32.000 0.00 0.00 36.46 2.52
142 143 8.980481 ATGAAAGTCAGTTTTCCTCTTTTCTA 57.020 30.769 0.00 0.00 36.46 2.10
143 144 8.980481 TGAAAGTCAGTTTTCCTCTTTTCTAT 57.020 30.769 0.00 0.00 36.46 1.98
144 145 9.408648 TGAAAGTCAGTTTTCCTCTTTTCTATT 57.591 29.630 0.00 0.00 36.46 1.73
151 152 9.912634 CAGTTTTCCTCTTTTCTATTTAATGCA 57.087 29.630 0.00 0.00 0.00 3.96
152 153 9.914131 AGTTTTCCTCTTTTCTATTTAATGCAC 57.086 29.630 0.00 0.00 0.00 4.57
153 154 9.691362 GTTTTCCTCTTTTCTATTTAATGCACA 57.309 29.630 0.00 0.00 0.00 4.57
155 156 9.859427 TTTCCTCTTTTCTATTTAATGCACATG 57.141 29.630 0.00 0.00 0.00 3.21
156 157 8.806429 TCCTCTTTTCTATTTAATGCACATGA 57.194 30.769 0.00 0.00 0.00 3.07
157 158 9.412460 TCCTCTTTTCTATTTAATGCACATGAT 57.588 29.630 0.00 0.00 0.00 2.45
160 161 9.806203 TCTTTTCTATTTAATGCACATGATTGG 57.194 29.630 0.00 0.00 0.00 3.16
161 162 9.806203 CTTTTCTATTTAATGCACATGATTGGA 57.194 29.630 0.00 0.00 0.00 3.53
163 164 9.752961 TTTCTATTTAATGCACATGATTGGATG 57.247 29.630 0.00 0.00 0.00 3.51
164 165 8.694581 TCTATTTAATGCACATGATTGGATGA 57.305 30.769 0.00 0.00 0.00 2.92
165 166 8.570488 TCTATTTAATGCACATGATTGGATGAC 58.430 33.333 0.00 0.00 0.00 3.06
166 167 5.518848 TTAATGCACATGATTGGATGACC 57.481 39.130 0.00 0.00 0.00 4.02
167 168 1.381522 TGCACATGATTGGATGACCG 58.618 50.000 0.00 0.00 39.42 4.79
168 169 0.029834 GCACATGATTGGATGACCGC 59.970 55.000 0.00 0.00 39.42 5.68
169 170 1.671979 CACATGATTGGATGACCGCT 58.328 50.000 0.00 0.00 39.42 5.52
170 171 1.600957 CACATGATTGGATGACCGCTC 59.399 52.381 0.00 0.00 39.42 5.03
171 172 1.487976 ACATGATTGGATGACCGCTCT 59.512 47.619 0.00 0.00 39.42 4.09
172 173 2.700371 ACATGATTGGATGACCGCTCTA 59.300 45.455 0.00 0.00 39.42 2.43
173 174 2.890808 TGATTGGATGACCGCTCTAC 57.109 50.000 0.00 0.00 39.42 2.59
174 175 2.388735 TGATTGGATGACCGCTCTACT 58.611 47.619 0.00 0.00 39.42 2.57
175 176 3.562182 TGATTGGATGACCGCTCTACTA 58.438 45.455 0.00 0.00 39.42 1.82
176 177 4.152647 TGATTGGATGACCGCTCTACTAT 58.847 43.478 0.00 0.00 39.42 2.12
177 178 4.218635 TGATTGGATGACCGCTCTACTATC 59.781 45.833 0.00 0.00 39.42 2.08
178 179 2.515854 TGGATGACCGCTCTACTATCC 58.484 52.381 0.00 0.00 39.42 2.59
179 180 1.469308 GGATGACCGCTCTACTATCCG 59.531 57.143 0.00 0.00 0.00 4.18
180 181 0.882474 ATGACCGCTCTACTATCCGC 59.118 55.000 0.00 0.00 0.00 5.54
181 182 0.179026 TGACCGCTCTACTATCCGCT 60.179 55.000 0.00 0.00 0.00 5.52
182 183 0.518195 GACCGCTCTACTATCCGCTC 59.482 60.000 0.00 0.00 0.00 5.03
183 184 0.108963 ACCGCTCTACTATCCGCTCT 59.891 55.000 0.00 0.00 0.00 4.09
184 185 0.800012 CCGCTCTACTATCCGCTCTC 59.200 60.000 0.00 0.00 0.00 3.20
185 186 0.440758 CGCTCTACTATCCGCTCTCG 59.559 60.000 0.00 0.00 0.00 4.04
196 197 3.389206 GCTCTCGGCGAACACATC 58.611 61.111 12.13 0.00 0.00 3.06
197 198 2.167861 GCTCTCGGCGAACACATCC 61.168 63.158 12.13 0.00 0.00 3.51
198 199 1.215382 CTCTCGGCGAACACATCCA 59.785 57.895 12.13 0.00 0.00 3.41
199 200 0.389817 CTCTCGGCGAACACATCCAA 60.390 55.000 12.13 0.00 0.00 3.53
200 201 0.034198 TCTCGGCGAACACATCCAAA 59.966 50.000 12.13 0.00 0.00 3.28
201 202 0.165944 CTCGGCGAACACATCCAAAC 59.834 55.000 12.13 0.00 0.00 2.93
202 203 1.154488 CGGCGAACACATCCAAACG 60.154 57.895 0.00 0.00 0.00 3.60
203 204 1.837538 CGGCGAACACATCCAAACGT 61.838 55.000 0.00 0.00 0.00 3.99
204 205 0.110373 GGCGAACACATCCAAACGTC 60.110 55.000 0.00 0.00 0.00 4.34
205 206 0.110373 GCGAACACATCCAAACGTCC 60.110 55.000 0.00 0.00 0.00 4.79
206 207 1.222300 CGAACACATCCAAACGTCCA 58.778 50.000 0.00 0.00 0.00 4.02
207 208 1.070175 CGAACACATCCAAACGTCCAC 60.070 52.381 0.00 0.00 0.00 4.02
208 209 0.941542 AACACATCCAAACGTCCACG 59.058 50.000 0.00 0.00 46.33 4.94
209 210 0.882927 ACACATCCAAACGTCCACGG 60.883 55.000 3.81 0.00 44.95 4.94
210 211 1.302192 ACATCCAAACGTCCACGGG 60.302 57.895 3.81 0.00 44.95 5.28
211 212 2.359478 ATCCAAACGTCCACGGGC 60.359 61.111 3.81 0.00 44.95 6.13
212 213 3.185299 ATCCAAACGTCCACGGGCA 62.185 57.895 3.81 0.00 44.95 5.36
213 214 2.478335 ATCCAAACGTCCACGGGCAT 62.478 55.000 3.81 0.00 44.95 4.40
214 215 2.265182 CCAAACGTCCACGGGCATT 61.265 57.895 3.81 0.00 44.95 3.56
215 216 1.657556 CAAACGTCCACGGGCATTT 59.342 52.632 3.81 0.00 44.95 2.32
216 217 0.662970 CAAACGTCCACGGGCATTTG 60.663 55.000 3.81 0.00 44.95 2.32
217 218 1.801309 AAACGTCCACGGGCATTTGG 61.801 55.000 3.81 0.00 44.95 3.28
218 219 2.671619 CGTCCACGGGCATTTGGT 60.672 61.111 0.00 0.00 34.19 3.67
219 220 2.961768 GTCCACGGGCATTTGGTG 59.038 61.111 0.00 0.00 34.19 4.17
220 221 1.901464 GTCCACGGGCATTTGGTGT 60.901 57.895 0.00 0.00 34.19 4.16
221 222 1.602323 TCCACGGGCATTTGGTGTC 60.602 57.895 0.00 0.00 34.19 3.67
222 223 2.560861 CACGGGCATTTGGTGTCG 59.439 61.111 0.00 0.00 31.51 4.35
223 224 2.112297 ACGGGCATTTGGTGTCGT 59.888 55.556 0.00 0.00 35.92 4.34
224 225 1.964373 ACGGGCATTTGGTGTCGTC 60.964 57.895 0.00 0.00 35.92 4.20
225 226 2.686816 CGGGCATTTGGTGTCGTCC 61.687 63.158 0.00 0.00 31.51 4.79
226 227 2.686816 GGGCATTTGGTGTCGTCCG 61.687 63.158 0.00 0.00 31.51 4.79
227 228 1.669760 GGCATTTGGTGTCGTCCGA 60.670 57.895 0.00 0.00 0.00 4.55
228 229 1.231958 GGCATTTGGTGTCGTCCGAA 61.232 55.000 0.00 0.00 35.60 4.30
229 230 0.165944 GCATTTGGTGTCGTCCGAAG 59.834 55.000 0.00 0.00 34.75 3.79
230 231 1.790755 CATTTGGTGTCGTCCGAAGA 58.209 50.000 0.00 0.00 34.75 2.87
231 232 1.459592 CATTTGGTGTCGTCCGAAGAC 59.540 52.381 7.45 7.45 39.83 3.01
232 233 0.460722 TTTGGTGTCGTCCGAAGACA 59.539 50.000 12.47 12.47 45.23 3.41
236 237 3.859650 TGTCGTCCGAAGACAGAAC 57.140 52.632 12.47 0.00 42.91 3.01
237 238 0.313043 TGTCGTCCGAAGACAGAACC 59.687 55.000 12.47 0.00 42.91 3.62
238 239 0.728466 GTCGTCCGAAGACAGAACCG 60.728 60.000 9.32 0.00 43.73 4.44
239 240 2.087009 CGTCCGAAGACAGAACCGC 61.087 63.158 0.00 0.00 43.73 5.68
240 241 2.087009 GTCCGAAGACAGAACCGCG 61.087 63.158 0.00 0.00 42.99 6.46
241 242 2.049433 CCGAAGACAGAACCGCGT 60.049 61.111 4.92 0.00 0.00 6.01
242 243 2.087009 CCGAAGACAGAACCGCGTC 61.087 63.158 4.92 0.00 0.00 5.19
243 244 2.426183 CGAAGACAGAACCGCGTCG 61.426 63.158 4.92 0.00 37.23 5.12
254 255 2.178521 CGCGTCGGAGTAGCTTGT 59.821 61.111 0.00 0.00 0.00 3.16
255 256 2.152699 CGCGTCGGAGTAGCTTGTG 61.153 63.158 0.00 0.00 0.00 3.33
256 257 2.445438 GCGTCGGAGTAGCTTGTGC 61.445 63.158 0.00 0.00 40.05 4.57
257 258 2.152699 CGTCGGAGTAGCTTGTGCG 61.153 63.158 0.00 0.00 45.42 5.34
258 259 2.126071 TCGGAGTAGCTTGTGCGC 60.126 61.111 0.00 0.00 45.42 6.09
259 260 2.432456 CGGAGTAGCTTGTGCGCA 60.432 61.111 5.66 5.66 45.42 6.09
260 261 1.811266 CGGAGTAGCTTGTGCGCAT 60.811 57.895 15.91 0.00 45.42 4.73
261 262 1.717937 GGAGTAGCTTGTGCGCATG 59.282 57.895 15.91 8.61 45.42 4.06
262 263 0.740868 GGAGTAGCTTGTGCGCATGA 60.741 55.000 15.91 4.12 45.42 3.07
263 264 0.371645 GAGTAGCTTGTGCGCATGAC 59.628 55.000 15.91 0.09 45.42 3.06
264 265 0.036952 AGTAGCTTGTGCGCATGACT 60.037 50.000 15.91 11.88 45.42 3.41
265 266 0.095935 GTAGCTTGTGCGCATGACTG 59.904 55.000 15.91 3.82 45.42 3.51
266 267 0.037419 TAGCTTGTGCGCATGACTGA 60.037 50.000 15.91 0.00 45.42 3.41
267 268 1.154338 GCTTGTGCGCATGACTGAC 60.154 57.895 15.91 0.00 0.00 3.51
268 269 1.572085 GCTTGTGCGCATGACTGACT 61.572 55.000 15.91 0.00 0.00 3.41
269 270 0.165295 CTTGTGCGCATGACTGACTG 59.835 55.000 15.91 0.00 0.00 3.51
270 271 0.532640 TTGTGCGCATGACTGACTGT 60.533 50.000 15.91 0.00 0.00 3.55
271 272 0.532640 TGTGCGCATGACTGACTGTT 60.533 50.000 15.91 0.00 0.00 3.16
272 273 0.164647 GTGCGCATGACTGACTGTTC 59.835 55.000 15.91 0.00 0.00 3.18
273 274 1.284297 TGCGCATGACTGACTGTTCG 61.284 55.000 5.66 0.00 0.00 3.95
274 275 1.284982 GCGCATGACTGACTGTTCGT 61.285 55.000 0.30 0.00 0.00 3.85
275 276 0.436150 CGCATGACTGACTGTTCGTG 59.564 55.000 0.00 0.00 0.00 4.35
276 277 0.792640 GCATGACTGACTGTTCGTGG 59.207 55.000 0.00 0.00 0.00 4.94
277 278 1.605457 GCATGACTGACTGTTCGTGGA 60.605 52.381 0.00 0.00 0.00 4.02
278 279 2.061773 CATGACTGACTGTTCGTGGAC 58.938 52.381 0.00 0.00 0.00 4.02
279 280 0.387929 TGACTGACTGTTCGTGGACC 59.612 55.000 0.00 0.00 0.00 4.46
280 281 0.663568 GACTGACTGTTCGTGGACCG 60.664 60.000 0.00 0.00 38.13 4.79
281 282 1.372997 CTGACTGTTCGTGGACCGG 60.373 63.158 0.00 0.00 37.11 5.28
282 283 1.802337 CTGACTGTTCGTGGACCGGA 61.802 60.000 9.46 0.00 37.11 5.14
283 284 1.364901 GACTGTTCGTGGACCGGAA 59.635 57.895 9.46 0.00 37.11 4.30
284 285 0.942884 GACTGTTCGTGGACCGGAAC 60.943 60.000 9.46 17.13 37.11 3.62
285 286 1.666872 CTGTTCGTGGACCGGAACC 60.667 63.158 9.46 12.29 37.11 3.62
286 287 2.372040 CTGTTCGTGGACCGGAACCA 62.372 60.000 9.46 15.12 37.11 3.67
287 288 1.666872 GTTCGTGGACCGGAACCAG 60.667 63.158 21.23 15.87 38.14 4.00
288 289 1.833492 TTCGTGGACCGGAACCAGA 60.833 57.895 21.23 17.37 38.14 3.86
289 290 1.812686 TTCGTGGACCGGAACCAGAG 61.813 60.000 21.23 18.02 38.14 3.35
290 291 2.571216 CGTGGACCGGAACCAGAGT 61.571 63.158 21.23 0.00 38.14 3.24
291 292 1.004918 GTGGACCGGAACCAGAGTG 60.005 63.158 21.23 0.00 38.14 3.51
292 293 1.152419 TGGACCGGAACCAGAGTGA 60.152 57.895 9.46 0.00 33.22 3.41
293 294 1.185618 TGGACCGGAACCAGAGTGAG 61.186 60.000 9.46 0.00 33.22 3.51
294 295 0.898789 GGACCGGAACCAGAGTGAGA 60.899 60.000 9.46 0.00 0.00 3.27
295 296 0.966920 GACCGGAACCAGAGTGAGAA 59.033 55.000 9.46 0.00 0.00 2.87
296 297 1.343465 GACCGGAACCAGAGTGAGAAA 59.657 52.381 9.46 0.00 0.00 2.52
297 298 1.766496 ACCGGAACCAGAGTGAGAAAA 59.234 47.619 9.46 0.00 0.00 2.29
298 299 2.372172 ACCGGAACCAGAGTGAGAAAAT 59.628 45.455 9.46 0.00 0.00 1.82
299 300 3.003480 CCGGAACCAGAGTGAGAAAATC 58.997 50.000 0.00 0.00 0.00 2.17
300 301 3.557054 CCGGAACCAGAGTGAGAAAATCA 60.557 47.826 0.00 0.00 34.79 2.57
301 302 4.065088 CGGAACCAGAGTGAGAAAATCAA 58.935 43.478 0.00 0.00 40.43 2.57
302 303 4.697352 CGGAACCAGAGTGAGAAAATCAAT 59.303 41.667 0.00 0.00 40.43 2.57
303 304 5.391310 CGGAACCAGAGTGAGAAAATCAATG 60.391 44.000 0.00 0.00 40.43 2.82
304 305 5.474876 GGAACCAGAGTGAGAAAATCAATGT 59.525 40.000 0.00 0.00 40.43 2.71
305 306 5.954296 ACCAGAGTGAGAAAATCAATGTG 57.046 39.130 0.00 0.00 44.40 3.21
306 307 4.217118 ACCAGAGTGAGAAAATCAATGTGC 59.783 41.667 0.00 0.00 43.70 4.57
307 308 4.380233 CCAGAGTGAGAAAATCAATGTGCC 60.380 45.833 0.00 0.00 43.70 5.01
308 309 4.216902 CAGAGTGAGAAAATCAATGTGCCA 59.783 41.667 0.00 0.00 39.90 4.92
309 310 4.217118 AGAGTGAGAAAATCAATGTGCCAC 59.783 41.667 0.00 0.00 40.43 5.01
310 311 4.147321 AGTGAGAAAATCAATGTGCCACT 58.853 39.130 0.00 0.00 40.43 4.00
311 312 4.022589 AGTGAGAAAATCAATGTGCCACTG 60.023 41.667 0.00 0.00 40.43 3.66
312 313 3.256383 TGAGAAAATCAATGTGCCACTGG 59.744 43.478 0.00 0.00 34.02 4.00
313 314 6.352729 TGAGAAAATCAATGTGCCACTGGC 62.353 45.833 13.68 13.68 41.69 4.85
329 330 3.106552 GCAATTGCCCGCGTGATA 58.893 55.556 20.06 0.00 34.31 2.15
330 331 1.009675 GCAATTGCCCGCGTGATAG 60.010 57.895 20.06 0.00 34.31 2.08
331 332 1.009675 CAATTGCCCGCGTGATAGC 60.010 57.895 4.92 0.00 0.00 2.97
332 333 1.153168 AATTGCCCGCGTGATAGCT 60.153 52.632 4.92 0.00 34.40 3.32
333 334 0.105964 AATTGCCCGCGTGATAGCTA 59.894 50.000 4.92 0.00 34.40 3.32
334 335 0.319900 ATTGCCCGCGTGATAGCTAG 60.320 55.000 4.92 0.00 34.40 3.42
335 336 1.388837 TTGCCCGCGTGATAGCTAGA 61.389 55.000 4.92 0.00 34.40 2.43
336 337 1.081108 GCCCGCGTGATAGCTAGAG 60.081 63.158 4.92 0.00 34.40 2.43
337 338 1.516365 GCCCGCGTGATAGCTAGAGA 61.516 60.000 4.92 0.00 34.40 3.10
338 339 0.238817 CCCGCGTGATAGCTAGAGAC 59.761 60.000 4.92 0.00 34.40 3.36
339 340 0.945099 CCGCGTGATAGCTAGAGACA 59.055 55.000 4.92 0.00 34.40 3.41
340 341 1.537638 CCGCGTGATAGCTAGAGACAT 59.462 52.381 4.92 0.00 34.40 3.06
341 342 2.742589 CCGCGTGATAGCTAGAGACATA 59.257 50.000 4.92 0.00 34.40 2.29
342 343 3.375610 CCGCGTGATAGCTAGAGACATAT 59.624 47.826 4.92 0.00 34.40 1.78
343 344 4.338596 CGCGTGATAGCTAGAGACATATG 58.661 47.826 0.00 0.00 34.40 1.78
344 345 4.101942 GCGTGATAGCTAGAGACATATGC 58.898 47.826 1.58 0.00 0.00 3.14
345 346 4.667262 CGTGATAGCTAGAGACATATGCC 58.333 47.826 1.58 0.00 0.00 4.40
346 347 4.397730 CGTGATAGCTAGAGACATATGCCT 59.602 45.833 1.58 0.00 0.00 4.75
347 348 5.448496 CGTGATAGCTAGAGACATATGCCTC 60.448 48.000 10.81 10.81 0.00 4.70
348 349 4.952957 TGATAGCTAGAGACATATGCCTCC 59.047 45.833 14.69 1.11 0.00 4.30
349 350 2.534990 AGCTAGAGACATATGCCTCCC 58.465 52.381 14.69 4.94 0.00 4.30
350 351 2.111613 AGCTAGAGACATATGCCTCCCT 59.888 50.000 14.69 6.95 0.00 4.20
351 352 2.903135 GCTAGAGACATATGCCTCCCTT 59.097 50.000 14.69 0.49 0.00 3.95
352 353 3.306641 GCTAGAGACATATGCCTCCCTTG 60.307 52.174 14.69 5.00 0.00 3.61
353 354 1.419387 AGAGACATATGCCTCCCTTGC 59.581 52.381 14.69 0.00 0.00 4.01
354 355 1.419387 GAGACATATGCCTCCCTTGCT 59.581 52.381 7.76 0.00 0.00 3.91
355 356 1.419387 AGACATATGCCTCCCTTGCTC 59.581 52.381 1.58 0.00 0.00 4.26
356 357 1.419387 GACATATGCCTCCCTTGCTCT 59.581 52.381 1.58 0.00 0.00 4.09
357 358 1.142465 ACATATGCCTCCCTTGCTCTG 59.858 52.381 1.58 0.00 0.00 3.35
358 359 1.419012 CATATGCCTCCCTTGCTCTGA 59.581 52.381 0.00 0.00 0.00 3.27
359 360 1.583556 TATGCCTCCCTTGCTCTGAA 58.416 50.000 0.00 0.00 0.00 3.02
360 361 0.255318 ATGCCTCCCTTGCTCTGAAG 59.745 55.000 0.00 0.00 0.00 3.02
361 362 1.130054 TGCCTCCCTTGCTCTGAAGT 61.130 55.000 0.00 0.00 0.00 3.01
362 363 0.037447 GCCTCCCTTGCTCTGAAGTT 59.963 55.000 0.00 0.00 0.00 2.66
363 364 1.948144 GCCTCCCTTGCTCTGAAGTTC 60.948 57.143 0.00 0.00 0.00 3.01
364 365 1.627834 CCTCCCTTGCTCTGAAGTTCT 59.372 52.381 4.17 0.00 0.00 3.01
365 366 2.354604 CCTCCCTTGCTCTGAAGTTCTC 60.355 54.545 4.17 0.00 0.00 2.87
366 367 2.566724 CTCCCTTGCTCTGAAGTTCTCT 59.433 50.000 4.17 0.00 0.00 3.10
367 368 3.766591 CTCCCTTGCTCTGAAGTTCTCTA 59.233 47.826 4.17 0.00 0.00 2.43
368 369 3.511934 TCCCTTGCTCTGAAGTTCTCTAC 59.488 47.826 4.17 0.00 0.00 2.59
369 370 3.368948 CCCTTGCTCTGAAGTTCTCTACC 60.369 52.174 4.17 0.00 0.00 3.18
370 371 3.259374 CCTTGCTCTGAAGTTCTCTACCA 59.741 47.826 4.17 0.00 0.00 3.25
414 420 4.602340 TCTCGACCTAGCTTGTTTCTTT 57.398 40.909 0.00 0.00 0.00 2.52
417 423 4.894784 TCGACCTAGCTTGTTTCTTTCAT 58.105 39.130 0.00 0.00 0.00 2.57
418 424 4.690748 TCGACCTAGCTTGTTTCTTTCATG 59.309 41.667 0.00 0.00 0.00 3.07
428 434 6.805760 GCTTGTTTCTTTCATGAAGATTCTCC 59.194 38.462 8.41 0.00 43.65 3.71
439 445 1.731720 AGATTCTCCAACGAGCTTGC 58.268 50.000 0.00 0.00 35.94 4.01
478 484 7.064134 CCATGACTTTCATTTAGCACGTTAGTA 59.936 37.037 0.00 0.00 34.28 1.82
512 518 4.265893 TCTCGAGTTCTCACTAGCAGATT 58.734 43.478 13.13 0.00 31.22 2.40
549 555 1.893808 AGTTGCAGGAACAGTGCGG 60.894 57.895 7.64 0.00 44.35 5.69
550 556 3.286751 TTGCAGGAACAGTGCGGC 61.287 61.111 0.00 0.00 44.35 6.53
551 557 4.560743 TGCAGGAACAGTGCGGCA 62.561 61.111 0.00 0.00 43.52 5.69
556 562 3.730761 GAACAGTGCGGCAGCCTG 61.731 66.667 19.89 19.89 44.33 4.85
580 600 3.622060 AACGGCTAGCCACGGCAAT 62.622 57.895 32.47 7.73 44.88 3.56
581 601 2.824041 CGGCTAGCCACGGCAATT 60.824 61.111 32.47 0.00 44.88 2.32
626 648 2.752354 CCAGTGTGGTCAACAACTTTGA 59.248 45.455 0.00 0.00 41.57 2.69
709 746 0.599558 AACCGTACGTAGCAGAAGCA 59.400 50.000 15.21 0.00 45.49 3.91
743 803 5.527951 CCATGTCTACTGATCAGCTAAGTC 58.472 45.833 22.83 14.59 0.00 3.01
744 804 5.068329 CCATGTCTACTGATCAGCTAAGTCA 59.932 44.000 22.83 18.97 0.00 3.41
761 821 4.485024 AGTCACGATCGACATGTATACC 57.515 45.455 24.34 0.00 38.43 2.73
763 823 2.224784 TCACGATCGACATGTATACCGG 59.775 50.000 24.34 0.00 0.00 5.28
774 840 3.780804 TGTATACCGGGAATTCCATGG 57.219 47.619 25.67 25.69 38.57 3.66
793 859 1.663695 GCTGGCGCCAAGTAATTCTA 58.336 50.000 32.09 2.57 0.00 2.10
802 868 4.733887 CGCCAAGTAATTCTAGTAGTCGTG 59.266 45.833 0.00 0.00 0.00 4.35
803 869 5.648572 GCCAAGTAATTCTAGTAGTCGTGT 58.351 41.667 0.00 0.00 0.00 4.49
808 874 9.999009 CAAGTAATTCTAGTAGTCGTGTCATTA 57.001 33.333 0.00 0.00 0.00 1.90
819 885 7.856398 AGTAGTCGTGTCATTAAATCTATCACG 59.144 37.037 8.19 8.19 45.10 4.35
820 886 6.561614 AGTCGTGTCATTAAATCTATCACGT 58.438 36.000 12.92 0.00 44.42 4.49
821 887 7.700505 AGTCGTGTCATTAAATCTATCACGTA 58.299 34.615 12.92 0.57 44.42 3.57
822 888 8.186163 AGTCGTGTCATTAAATCTATCACGTAA 58.814 33.333 12.92 0.00 44.42 3.18
823 889 8.800972 GTCGTGTCATTAAATCTATCACGTAAA 58.199 33.333 12.92 0.00 44.42 2.01
824 890 8.800972 TCGTGTCATTAAATCTATCACGTAAAC 58.199 33.333 12.92 0.00 44.42 2.01
825 891 8.588789 CGTGTCATTAAATCTATCACGTAAACA 58.411 33.333 0.00 0.00 41.01 2.83
826 892 9.685005 GTGTCATTAAATCTATCACGTAAACAC 57.315 33.333 0.00 0.00 0.00 3.32
890 958 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
891 959 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
892 960 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
893 961 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
894 962 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
895 963 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
896 964 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
897 965 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
907 975 5.070180 AGAGAGAGAGAGAGAGAGAGATGTG 59.930 48.000 0.00 0.00 0.00 3.21
909 977 5.899547 AGAGAGAGAGAGAGAGAGATGTGTA 59.100 44.000 0.00 0.00 0.00 2.90
934 1002 4.661222 TGGTCAATGAAATGAACTGGCTA 58.339 39.130 0.00 0.00 37.90 3.93
937 1005 4.397417 GTCAATGAAATGAACTGGCTAGCT 59.603 41.667 15.72 0.00 0.00 3.32
938 1006 4.397103 TCAATGAAATGAACTGGCTAGCTG 59.603 41.667 15.72 10.51 0.00 4.24
939 1007 2.715046 TGAAATGAACTGGCTAGCTGG 58.285 47.619 15.72 10.10 0.00 4.85
941 1009 0.745845 AATGAACTGGCTAGCTGGCG 60.746 55.000 16.50 5.67 45.14 5.69
942 1010 1.903877 ATGAACTGGCTAGCTGGCGT 61.904 55.000 16.50 6.37 45.14 5.68
943 1011 1.254975 TGAACTGGCTAGCTGGCGTA 61.255 55.000 16.50 6.72 45.14 4.42
944 1012 0.806492 GAACTGGCTAGCTGGCGTAC 60.806 60.000 16.50 2.77 45.14 3.67
945 1013 1.541310 AACTGGCTAGCTGGCGTACA 61.541 55.000 16.50 7.62 45.14 2.90
946 1014 1.218047 CTGGCTAGCTGGCGTACAA 59.782 57.895 16.50 0.00 45.14 2.41
947 1015 1.079405 TGGCTAGCTGGCGTACAAC 60.079 57.895 16.50 1.21 45.14 3.32
948 1016 1.814169 GGCTAGCTGGCGTACAACC 60.814 63.158 16.50 0.00 0.00 3.77
949 1017 1.079405 GCTAGCTGGCGTACAACCA 60.079 57.895 6.22 4.64 35.40 3.67
950 1018 1.359459 GCTAGCTGGCGTACAACCAC 61.359 60.000 6.22 0.00 32.49 4.16
951 1019 0.037697 CTAGCTGGCGTACAACCACA 60.038 55.000 0.00 0.00 32.49 4.17
952 1020 0.393448 TAGCTGGCGTACAACCACAA 59.607 50.000 0.00 0.00 32.49 3.33
953 1021 1.164041 AGCTGGCGTACAACCACAAC 61.164 55.000 0.46 0.00 32.49 3.32
954 1022 1.164041 GCTGGCGTACAACCACAACT 61.164 55.000 0.46 0.00 32.49 3.16
955 1023 1.874739 GCTGGCGTACAACCACAACTA 60.875 52.381 0.46 0.00 32.49 2.24
956 1024 2.066262 CTGGCGTACAACCACAACTAG 58.934 52.381 0.46 0.00 32.49 2.57
957 1025 1.687660 TGGCGTACAACCACAACTAGA 59.312 47.619 0.00 0.00 30.29 2.43
964 1032 3.541632 ACAACCACAACTAGAACCACAG 58.458 45.455 0.00 0.00 0.00 3.66
971 1039 4.926238 CACAACTAGAACCACAGACTCATC 59.074 45.833 0.00 0.00 0.00 2.92
973 1041 2.164624 ACTAGAACCACAGACTCATCGC 59.835 50.000 0.00 0.00 0.00 4.58
983 1051 1.132643 AGACTCATCGCTTCACGTACC 59.867 52.381 0.00 0.00 44.19 3.34
984 1052 0.885879 ACTCATCGCTTCACGTACCA 59.114 50.000 0.00 0.00 44.19 3.25
986 1054 2.288579 ACTCATCGCTTCACGTACCAAA 60.289 45.455 0.00 0.00 44.19 3.28
987 1055 2.333926 TCATCGCTTCACGTACCAAAG 58.666 47.619 0.00 0.00 44.19 2.77
988 1056 1.076332 ATCGCTTCACGTACCAAAGC 58.924 50.000 11.83 11.83 44.19 3.51
990 1058 0.796312 CGCTTCACGTACCAAAGCAT 59.204 50.000 18.29 0.00 44.39 3.79
991 1059 1.201921 CGCTTCACGTACCAAAGCATC 60.202 52.381 18.29 0.00 44.39 3.91
1050 1161 4.541648 GGGGCCCTCCTCGCTCTA 62.542 72.222 24.38 0.00 35.33 2.43
1060 1171 0.814457 CCTCGCTCTAGTGCTTCTGT 59.186 55.000 14.40 0.00 0.00 3.41
1164 1281 2.121832 AGGTCGACATGGGTGGGA 59.878 61.111 18.91 0.00 0.00 4.37
1186 1303 1.153289 ATCAGCTGGACGTGCATCC 60.153 57.895 15.13 4.92 39.45 3.51
1195 1312 2.749044 CGTGCATCCAGCTGGCTT 60.749 61.111 28.91 15.02 45.94 4.35
1221 1338 1.009900 CTTCTACGCCGACGCTAGG 60.010 63.158 0.00 0.00 45.53 3.02
1337 1457 2.429930 CACAGCCTCCCCGTTCAA 59.570 61.111 0.00 0.00 0.00 2.69
1340 1460 1.073199 CAGCCTCCCCGTTCAAACT 59.927 57.895 0.00 0.00 0.00 2.66
1347 1467 1.237285 CCCCGTTCAAACTGAGCAGG 61.237 60.000 2.20 0.00 0.00 4.85
1348 1468 1.576421 CCGTTCAAACTGAGCAGGC 59.424 57.895 2.20 0.00 0.00 4.85
1350 1470 0.040958 CGTTCAAACTGAGCAGGCAC 60.041 55.000 2.20 0.00 0.00 5.01
1430 1586 6.254281 ACATCCACAAAAGAAAGATTACCG 57.746 37.500 0.00 0.00 0.00 4.02
1495 1652 0.468214 TGCCTCGCTAGCCTATGAGT 60.468 55.000 9.66 0.00 0.00 3.41
1782 1940 5.344743 AACACCATTATGATCTCGACAGT 57.655 39.130 0.00 0.00 0.00 3.55
1788 1946 6.490381 ACCATTATGATCTCGACAGTTAGCTA 59.510 38.462 0.00 0.00 0.00 3.32
1939 2098 4.264253 TCGATGACTTTCAAATCTGCCAT 58.736 39.130 0.00 0.00 0.00 4.40
2008 2167 0.878523 TCATAAATCGCCTTCCGCCG 60.879 55.000 0.00 0.00 36.73 6.46
2457 2618 8.409371 TCTATAAGCTGATCTGACACTAAACTG 58.591 37.037 3.42 0.00 0.00 3.16
2458 2619 5.474578 AAGCTGATCTGACACTAAACTGA 57.525 39.130 3.42 0.00 0.00 3.41
2459 2620 5.070770 AGCTGATCTGACACTAAACTGAG 57.929 43.478 3.42 0.00 0.00 3.35
2460 2621 3.616379 GCTGATCTGACACTAAACTGAGC 59.384 47.826 3.42 0.00 0.00 4.26
2461 2622 4.814147 CTGATCTGACACTAAACTGAGCA 58.186 43.478 0.00 0.00 0.00 4.26
2462 2623 4.814147 TGATCTGACACTAAACTGAGCAG 58.186 43.478 0.00 0.00 0.00 4.24
2463 2624 3.667497 TCTGACACTAAACTGAGCAGG 57.333 47.619 2.20 0.00 0.00 4.85
2464 2625 2.072298 CTGACACTAAACTGAGCAGGC 58.928 52.381 2.20 0.00 0.00 4.85
2465 2626 1.416030 TGACACTAAACTGAGCAGGCA 59.584 47.619 2.20 0.00 0.00 4.75
2466 2627 1.801178 GACACTAAACTGAGCAGGCAC 59.199 52.381 2.20 0.00 0.00 5.01
2467 2628 1.417890 ACACTAAACTGAGCAGGCACT 59.582 47.619 2.20 0.00 43.88 4.40
2468 2629 2.632996 ACACTAAACTGAGCAGGCACTA 59.367 45.455 2.20 0.00 36.02 2.74
2469 2630 3.071023 ACACTAAACTGAGCAGGCACTAA 59.929 43.478 2.20 0.00 36.02 2.24
2470 2631 4.256920 CACTAAACTGAGCAGGCACTAAT 58.743 43.478 2.20 0.00 36.02 1.73
2471 2632 4.697352 CACTAAACTGAGCAGGCACTAATT 59.303 41.667 2.20 0.00 36.02 1.40
2472 2633 4.697352 ACTAAACTGAGCAGGCACTAATTG 59.303 41.667 2.20 0.00 36.02 2.32
2513 2674 0.108329 GGGCCGAACGATCTTCTGAA 60.108 55.000 0.00 0.00 0.00 3.02
2562 2724 2.862541 CCGATCATGGGCCTTGATTAA 58.137 47.619 29.25 8.43 34.03 1.40
2565 2727 3.885297 CGATCATGGGCCTTGATTAACTT 59.115 43.478 29.25 12.45 34.03 2.66
2567 2729 5.530915 CGATCATGGGCCTTGATTAACTTAA 59.469 40.000 29.25 5.42 34.03 1.85
2568 2730 6.293626 CGATCATGGGCCTTGATTAACTTAAG 60.294 42.308 29.25 13.52 34.03 1.85
2573 2753 5.014202 GGGCCTTGATTAACTTAAGACCAA 58.986 41.667 10.09 4.87 0.00 3.67
2576 2756 5.710567 GCCTTGATTAACTTAAGACCAACCT 59.289 40.000 10.09 0.00 0.00 3.50
2584 2764 6.610075 AACTTAAGACCAACCTTCCGTATA 57.390 37.500 10.09 0.00 0.00 1.47
2592 2772 6.155737 AGACCAACCTTCCGTATATAGTTTGT 59.844 38.462 0.00 0.00 0.00 2.83
2603 2783 1.006813 ATAGTTTGTCCCATGGCCCA 58.993 50.000 6.09 1.28 0.00 5.36
2605 2785 0.324645 AGTTTGTCCCATGGCCCATC 60.325 55.000 6.09 1.96 0.00 3.51
2608 2788 1.508667 TTGTCCCATGGCCCATCAGT 61.509 55.000 6.09 0.00 0.00 3.41
2609 2789 1.454479 GTCCCATGGCCCATCAGTG 60.454 63.158 6.09 0.00 0.00 3.66
2610 2790 2.836360 CCCATGGCCCATCAGTGC 60.836 66.667 6.09 0.00 0.00 4.40
2611 2791 3.214123 CCATGGCCCATCAGTGCG 61.214 66.667 0.00 0.00 0.00 5.34
2613 2793 2.124570 ATGGCCCATCAGTGCGAC 60.125 61.111 0.00 0.00 0.00 5.19
2614 2794 2.970379 ATGGCCCATCAGTGCGACA 61.970 57.895 0.00 0.00 0.00 4.35
2615 2795 3.127533 GGCCCATCAGTGCGACAC 61.128 66.667 0.00 2.28 34.10 3.67
2616 2796 3.490759 GCCCATCAGTGCGACACG 61.491 66.667 4.69 0.00 39.64 4.49
2617 2797 2.815211 CCCATCAGTGCGACACGG 60.815 66.667 4.69 4.50 39.64 4.94
2618 2798 3.490759 CCATCAGTGCGACACGGC 61.491 66.667 5.53 0.00 39.64 5.68
2619 2799 3.842126 CATCAGTGCGACACGGCG 61.842 66.667 4.80 4.80 39.64 6.46
2620 2800 4.050934 ATCAGTGCGACACGGCGA 62.051 61.111 16.62 0.00 39.64 5.54
2621 2801 3.971453 ATCAGTGCGACACGGCGAG 62.971 63.158 16.62 8.85 39.64 5.03
2623 2803 4.702081 AGTGCGACACGGCGAGTC 62.702 66.667 24.46 24.46 39.64 3.36
2626 2806 4.796231 GCGACACGGCGAGTCCAT 62.796 66.667 27.21 0.00 32.41 3.41
2627 2807 2.880879 CGACACGGCGAGTCCATG 60.881 66.667 27.21 12.96 33.41 3.66
2628 2808 2.509336 GACACGGCGAGTCCATGG 60.509 66.667 24.01 4.97 30.88 3.66
2629 2809 4.760047 ACACGGCGAGTCCATGGC 62.760 66.667 16.62 2.00 30.88 4.40
2630 2810 4.758251 CACGGCGAGTCCATGGCA 62.758 66.667 16.62 0.00 33.59 4.92
2631 2811 3.785859 ACGGCGAGTCCATGGCAT 61.786 61.111 16.62 0.00 33.59 4.40
2632 2812 2.969238 CGGCGAGTCCATGGCATC 60.969 66.667 6.96 6.41 33.59 3.91
2633 2813 2.592861 GGCGAGTCCATGGCATCC 60.593 66.667 6.96 0.00 33.59 3.51
2634 2814 2.969238 GCGAGTCCATGGCATCCG 60.969 66.667 6.96 8.94 31.94 4.18
2672 2863 4.514066 GTCGCCCTTTTCTACTTCTTTTCA 59.486 41.667 0.00 0.00 0.00 2.69
2736 2936 1.363744 CTCGGCTCCTTACTTGCTTG 58.636 55.000 0.00 0.00 0.00 4.01
2841 3045 2.678934 CGGAAGTCTCCCCGTCCA 60.679 66.667 5.69 0.00 40.78 4.02
2842 3046 2.979649 GGAAGTCTCCCCGTCCAC 59.020 66.667 0.00 0.00 35.42 4.02
2843 3047 2.657066 GGAAGTCTCCCCGTCCACC 61.657 68.421 0.00 0.00 35.42 4.61
2845 3049 3.477956 AAGTCTCCCCGTCCACCCA 62.478 63.158 0.00 0.00 0.00 4.51
2846 3050 2.687566 GTCTCCCCGTCCACCCAT 60.688 66.667 0.00 0.00 0.00 4.00
2847 3051 2.687200 TCTCCCCGTCCACCCATG 60.687 66.667 0.00 0.00 0.00 3.66
2851 3099 4.802051 CCCGTCCACCCATGGCAG 62.802 72.222 6.09 0.00 46.80 4.85
2864 3112 0.622738 ATGGCAGGGGAGACATCAGT 60.623 55.000 0.00 0.00 0.00 3.41
2865 3113 0.042581 TGGCAGGGGAGACATCAGTA 59.957 55.000 0.00 0.00 0.00 2.74
2866 3114 0.755686 GGCAGGGGAGACATCAGTAG 59.244 60.000 0.00 0.00 0.00 2.57
2867 3115 1.689575 GGCAGGGGAGACATCAGTAGA 60.690 57.143 0.00 0.00 0.00 2.59
2893 3178 9.220767 AGGAACTGAAGTATATGAGTTGAAAAC 57.779 33.333 0.00 0.00 43.67 2.43
3014 3311 4.081531 TCGTGTATCCCGAACCTTTTGTAT 60.082 41.667 0.00 0.00 0.00 2.29
3204 3514 7.280205 GGTATTGATCTACTGAAAAATGTCCGT 59.720 37.037 0.00 0.00 0.00 4.69
3346 3656 0.387929 TCCATACTTCATCCGGACGC 59.612 55.000 6.12 0.00 0.00 5.19
3348 3658 0.389391 CATACTTCATCCGGACGCCT 59.611 55.000 6.12 0.00 0.00 5.52
3470 3783 4.338879 AGGTTCATTCCTGATCTTGTTGG 58.661 43.478 0.00 0.00 36.35 3.77
3507 3820 5.048013 AGTCGACACTCATGTTTCATACAGA 60.048 40.000 19.50 0.00 39.95 3.41
3536 3849 1.202627 CCATCCTTCAGCTACAGAGGC 60.203 57.143 0.00 0.00 0.00 4.70
3550 3863 5.533154 GCTACAGAGGCTGATCTAAAGAGTA 59.467 44.000 0.00 0.00 35.18 2.59
3679 3992 1.005450 GGGGCTTTGTCTGGATTACCA 59.995 52.381 0.00 0.00 44.76 3.25
3807 4120 3.963428 AAACTTAGTCAGAGATGGCGT 57.037 42.857 0.00 0.00 0.00 5.68
3842 4155 4.806640 TGGAAAATCCTGGAATTTCAGC 57.193 40.909 28.99 17.90 37.46 4.26
3853 4166 4.934356 TGGAATTTCAGCAAGTATTCCCT 58.066 39.130 14.31 0.00 43.41 4.20
3981 4294 4.137543 GGTCCACTGACTTTGACAGAATT 58.862 43.478 0.00 0.00 41.47 2.17
4385 4716 3.514309 GCATTATCCTACGATGTACCCCT 59.486 47.826 0.00 0.00 0.00 4.79
4758 5580 1.862411 GCTTGTTTAACCCGTGCACAC 60.862 52.381 18.64 5.95 0.00 3.82
5110 6189 7.454260 AGCCTTTTAAAGTCATTGGAAGTAG 57.546 36.000 3.91 0.00 0.00 2.57
5190 6271 0.673644 ATCTTGGCCAACCGTTCTCG 60.674 55.000 16.05 1.92 39.70 4.04
5295 6376 6.127366 GCATGGACATTCCTAAATCCTTTGAA 60.127 38.462 0.00 0.00 37.46 2.69
5395 6476 1.926426 AAGATTTCAGAGGGCCCCCG 61.926 60.000 21.43 7.36 41.95 5.73
5410 6491 2.350458 CCCGGGCAGTCAAATTGGG 61.350 63.158 8.08 0.00 0.00 4.12
5573 6654 6.353323 TCAATTCTCACAGTGGAACAACTTA 58.647 36.000 0.00 0.00 44.16 2.24
5866 6948 5.781306 TGGTTATGTGAGTACCAGTTTCCTA 59.219 40.000 0.00 0.00 37.04 2.94
5999 7089 2.298729 GGCCATCAGACTATCTCCAGAC 59.701 54.545 0.00 0.00 0.00 3.51
6059 7151 8.707938 ATAGTTTTAGCCAATCTTTGAATTGC 57.292 30.769 0.00 0.00 35.68 3.56
6096 7190 3.435105 TTTGTCACATGTGAACAAGCC 57.565 42.857 29.42 16.34 41.85 4.35
6100 7194 1.680735 TCACATGTGAACAAGCCAACC 59.319 47.619 26.02 0.00 36.53 3.77
6192 7296 9.516314 GGAAAGTGGTGCTATATTATTTGTTTC 57.484 33.333 0.00 0.00 0.00 2.78
6215 7460 5.721000 TCCAATTGGGAAATAGAATGCTTGT 59.279 36.000 24.29 0.00 44.80 3.16
6307 7568 8.671384 ACTTTCTGTTTGTATTACACTAAGCA 57.329 30.769 0.00 0.00 0.00 3.91
6351 7612 9.638239 TTTAATTTCAGTAAGATCATTTGCCAC 57.362 29.630 0.00 0.00 0.00 5.01
6354 7615 5.426689 TCAGTAAGATCATTTGCCACTCT 57.573 39.130 0.00 0.00 0.00 3.24
6365 7626 0.895559 TGCCACTCTTGAGAGCGAGA 60.896 55.000 7.91 0.00 45.79 4.04
6405 7677 0.169672 CAAGGGCTTGCGTGAATGAG 59.830 55.000 0.00 0.00 33.45 2.90
6589 7866 6.990349 TGATATTTCGAGGGGAATACTGAAAC 59.010 38.462 0.00 0.00 33.85 2.78
6621 7898 6.037062 CAGACGACAGAATGGTTAATATGCAA 59.963 38.462 0.00 0.00 43.62 4.08
6642 7919 2.373540 AAGAATTGTACGGCGCTACA 57.626 45.000 6.90 12.32 0.00 2.74
6662 7939 2.028420 TCATGCCTCGACAAAGATGG 57.972 50.000 0.00 0.00 0.00 3.51
6880 8157 6.351881 GGGCGATAATCCATCTAATACTCCAA 60.352 42.308 0.00 0.00 0.00 3.53
6894 8171 9.920946 TCTAATACTCCAATTAAAAATGAGCCT 57.079 29.630 0.00 0.00 0.00 4.58
6952 8235 8.466798 GCCCACTAAACATAACTAATCACATTT 58.533 33.333 0.00 0.00 0.00 2.32
6967 8250 2.290367 CACATTTTCGAGCACCTCACAA 59.710 45.455 0.00 0.00 0.00 3.33
6976 8259 2.821969 GAGCACCTCACAAACATGGATT 59.178 45.455 0.00 0.00 0.00 3.01
7310 8605 2.622942 GGTTCAGATGCTTGTGGTTTCA 59.377 45.455 0.00 0.00 0.00 2.69
7343 8644 4.660789 AGCCTGCATATTGATTTTCCAC 57.339 40.909 0.00 0.00 0.00 4.02
7476 8778 5.746245 GCAACATGCACTGTTTTTACTTGTA 59.254 36.000 10.56 0.00 45.98 2.41
7478 8780 7.593273 GCAACATGCACTGTTTTTACTTGTATA 59.407 33.333 10.56 0.00 45.98 1.47
7484 8786 8.369424 TGCACTGTTTTTACTTGTATACTCCTA 58.631 33.333 4.17 0.00 0.00 2.94
7507 8809 4.837896 ACTTTTTCTAGCTTTCTGGCAC 57.162 40.909 0.00 0.00 34.17 5.01
7511 8813 4.357918 TTTCTAGCTTTCTGGCACTCTT 57.642 40.909 0.00 0.00 34.17 2.85
7526 8828 0.311790 CTCTTGCCGCTTGCTTTTCA 59.688 50.000 0.00 0.00 42.00 2.69
7635 8937 3.057736 CCATCAGCAGAACAACTTCAAGG 60.058 47.826 0.00 0.00 0.00 3.61
7658 8960 3.195610 TGACCTTGTATACAGCTCCACAG 59.804 47.826 5.56 0.00 0.00 3.66
7679 8981 7.094634 CCACAGATTACTCTTGCTTAACATGTT 60.095 37.037 16.68 16.68 0.00 2.71
7693 8995 4.846779 AACATGTTTTGCCGAGTACATT 57.153 36.364 4.92 0.00 0.00 2.71
7713 9015 7.124347 ACATTTTGCATCATTGTGTTGATTC 57.876 32.000 0.00 0.00 34.09 2.52
7721 9023 7.876582 TGCATCATTGTGTTGATTCCAAAAATA 59.123 29.630 0.00 0.00 34.09 1.40
7760 9062 9.769677 AATATTACACAGTATAGGCCTATCTCA 57.230 33.333 28.75 9.20 0.00 3.27
7781 9104 8.109705 TCTCACTTTGCAATGTGTTATACAAT 57.890 30.769 32.39 2.91 43.77 2.71
7810 9133 7.061054 TGCTCTAAGGTTCTAGCTAATAGACA 58.939 38.462 0.00 0.00 40.33 3.41
7876 9199 1.451927 TGCCGGGCAGATTGATCAC 60.452 57.895 19.77 0.00 33.32 3.06
7937 9260 6.901081 ATGAAACGGAAAGAAAGGAAAGAT 57.099 33.333 0.00 0.00 0.00 2.40
7939 9262 7.435068 TGAAACGGAAAGAAAGGAAAGATAG 57.565 36.000 0.00 0.00 0.00 2.08
7949 9272 2.632537 AGGAAAGATAGGGTGGTGTGT 58.367 47.619 0.00 0.00 0.00 3.72
7957 9280 0.916086 AGGGTGGTGTGTTGTGAAGA 59.084 50.000 0.00 0.00 0.00 2.87
7959 9282 1.608590 GGGTGGTGTGTTGTGAAGATG 59.391 52.381 0.00 0.00 0.00 2.90
8043 9366 0.324943 GCTTTGCAGAGGAGTGGGTA 59.675 55.000 6.36 0.00 0.00 3.69
8045 9368 2.619074 GCTTTGCAGAGGAGTGGGTATT 60.619 50.000 6.36 0.00 0.00 1.89
8070 9393 4.392047 TGATCATGCAATGTGTATCCTCC 58.608 43.478 0.00 0.00 46.80 4.30
8080 9403 6.674760 GCAATGTGTATCCTCCGTTAGTTTTC 60.675 42.308 0.00 0.00 0.00 2.29
8082 9405 5.856156 TGTGTATCCTCCGTTAGTTTTCAA 58.144 37.500 0.00 0.00 0.00 2.69
8098 9421 2.957402 TCAAGTGAAGGTGAATGGCT 57.043 45.000 0.00 0.00 0.00 4.75
8099 9422 2.507484 TCAAGTGAAGGTGAATGGCTG 58.493 47.619 0.00 0.00 0.00 4.85
8100 9423 2.106338 TCAAGTGAAGGTGAATGGCTGA 59.894 45.455 0.00 0.00 0.00 4.26
8101 9424 2.886523 CAAGTGAAGGTGAATGGCTGAA 59.113 45.455 0.00 0.00 0.00 3.02
8102 9425 3.228188 AGTGAAGGTGAATGGCTGAAA 57.772 42.857 0.00 0.00 0.00 2.69
8103 9426 3.152341 AGTGAAGGTGAATGGCTGAAAG 58.848 45.455 0.00 0.00 0.00 2.62
8104 9427 2.887152 GTGAAGGTGAATGGCTGAAAGT 59.113 45.455 0.00 0.00 35.30 2.66
8105 9428 2.886523 TGAAGGTGAATGGCTGAAAGTG 59.113 45.455 0.00 0.00 35.30 3.16
8106 9429 1.251251 AGGTGAATGGCTGAAAGTGC 58.749 50.000 0.00 0.00 35.30 4.40
8107 9430 0.961019 GGTGAATGGCTGAAAGTGCA 59.039 50.000 0.00 0.00 35.30 4.57
8108 9431 1.340889 GGTGAATGGCTGAAAGTGCAA 59.659 47.619 0.00 0.00 35.30 4.08
8109 9432 2.397549 GTGAATGGCTGAAAGTGCAAC 58.602 47.619 0.00 0.00 35.30 4.17
8121 9444 3.175133 GTGCAACTATCCCTGGGTG 57.825 57.895 13.56 4.13 0.00 4.61
8122 9445 0.394352 GTGCAACTATCCCTGGGTGG 60.394 60.000 13.56 4.93 0.00 4.61
8123 9446 0.844661 TGCAACTATCCCTGGGTGGT 60.845 55.000 13.56 5.59 0.00 4.16
8124 9447 0.331616 GCAACTATCCCTGGGTGGTT 59.668 55.000 13.56 11.34 0.00 3.67
8125 9448 1.272480 GCAACTATCCCTGGGTGGTTT 60.272 52.381 13.56 0.00 0.00 3.27
8126 9449 2.821625 GCAACTATCCCTGGGTGGTTTT 60.822 50.000 13.56 0.00 0.00 2.43
8127 9450 2.825532 CAACTATCCCTGGGTGGTTTTG 59.174 50.000 13.56 7.43 0.00 2.44
8128 9451 2.354328 ACTATCCCTGGGTGGTTTTGA 58.646 47.619 13.56 0.00 0.00 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 2.162716 GTCGGGATCGGCAATATGC 58.837 57.895 0.00 0.00 44.08 3.14
15 16 0.458669 TACTCTTTGTCGGGATCGGC 59.541 55.000 0.00 0.00 42.06 5.54
16 17 1.067212 CCTACTCTTTGTCGGGATCGG 59.933 57.143 0.00 0.00 36.95 4.18
17 18 2.022195 TCCTACTCTTTGTCGGGATCG 58.978 52.381 0.00 0.00 32.85 3.69
18 19 2.223525 CGTCCTACTCTTTGTCGGGATC 60.224 54.545 0.00 0.00 34.76 3.36
19 20 1.749634 CGTCCTACTCTTTGTCGGGAT 59.250 52.381 0.00 0.00 34.76 3.85
20 21 1.171308 CGTCCTACTCTTTGTCGGGA 58.829 55.000 0.00 0.00 32.85 5.14
21 22 0.886563 ACGTCCTACTCTTTGTCGGG 59.113 55.000 0.00 0.00 32.85 5.14
22 23 1.402456 CCACGTCCTACTCTTTGTCGG 60.402 57.143 0.00 0.00 33.24 4.79
23 24 1.402456 CCCACGTCCTACTCTTTGTCG 60.402 57.143 0.00 0.00 0.00 4.35
24 25 1.891150 TCCCACGTCCTACTCTTTGTC 59.109 52.381 0.00 0.00 0.00 3.18
25 26 1.617357 GTCCCACGTCCTACTCTTTGT 59.383 52.381 0.00 0.00 0.00 2.83
26 27 1.616865 TGTCCCACGTCCTACTCTTTG 59.383 52.381 0.00 0.00 0.00 2.77
27 28 1.617357 GTGTCCCACGTCCTACTCTTT 59.383 52.381 0.00 0.00 0.00 2.52
28 29 1.254954 GTGTCCCACGTCCTACTCTT 58.745 55.000 0.00 0.00 0.00 2.85
29 30 2.958513 GTGTCCCACGTCCTACTCT 58.041 57.895 0.00 0.00 0.00 3.24
40 41 1.369692 GATGTGGTCACGTGTCCCA 59.630 57.895 25.73 23.05 0.00 4.37
41 42 1.736645 CGATGTGGTCACGTGTCCC 60.737 63.158 25.73 21.00 0.00 4.46
42 43 1.736645 CCGATGTGGTCACGTGTCC 60.737 63.158 22.81 22.81 0.00 4.02
43 44 1.007336 GTCCGATGTGGTCACGTGTC 61.007 60.000 16.51 10.16 39.52 3.67
44 45 1.006571 GTCCGATGTGGTCACGTGT 60.007 57.895 16.51 0.00 39.52 4.49
45 46 0.598942 TTGTCCGATGTGGTCACGTG 60.599 55.000 9.94 9.94 35.41 4.49
46 47 0.105224 TTTGTCCGATGTGGTCACGT 59.895 50.000 0.00 0.00 35.41 4.49
47 48 1.222300 TTTTGTCCGATGTGGTCACG 58.778 50.000 0.00 0.00 35.41 4.35
48 49 2.616842 ACTTTTTGTCCGATGTGGTCAC 59.383 45.455 0.00 0.00 35.41 3.67
49 50 2.925724 ACTTTTTGTCCGATGTGGTCA 58.074 42.857 0.00 0.00 39.52 4.02
50 51 4.151867 GTCTACTTTTTGTCCGATGTGGTC 59.848 45.833 0.00 0.00 39.52 4.02
51 52 4.062991 GTCTACTTTTTGTCCGATGTGGT 58.937 43.478 0.00 0.00 39.52 4.16
52 53 3.122948 CGTCTACTTTTTGTCCGATGTGG 59.877 47.826 0.00 0.00 40.09 4.17
53 54 3.985279 TCGTCTACTTTTTGTCCGATGTG 59.015 43.478 0.00 0.00 0.00 3.21
54 55 4.022589 TCTCGTCTACTTTTTGTCCGATGT 60.023 41.667 0.00 0.00 0.00 3.06
55 56 4.323868 GTCTCGTCTACTTTTTGTCCGATG 59.676 45.833 0.00 0.00 0.00 3.84
56 57 4.217983 AGTCTCGTCTACTTTTTGTCCGAT 59.782 41.667 0.00 0.00 0.00 4.18
57 58 3.567164 AGTCTCGTCTACTTTTTGTCCGA 59.433 43.478 0.00 0.00 0.00 4.55
58 59 3.898529 AGTCTCGTCTACTTTTTGTCCG 58.101 45.455 0.00 0.00 0.00 4.79
59 60 3.913163 CGAGTCTCGTCTACTTTTTGTCC 59.087 47.826 14.27 0.00 34.72 4.02
60 61 3.913163 CCGAGTCTCGTCTACTTTTTGTC 59.087 47.826 20.37 0.00 38.40 3.18
61 62 3.567164 TCCGAGTCTCGTCTACTTTTTGT 59.433 43.478 20.37 0.00 38.40 2.83
62 63 4.156664 TCCGAGTCTCGTCTACTTTTTG 57.843 45.455 20.37 1.88 38.40 2.44
63 64 4.142425 GGATCCGAGTCTCGTCTACTTTTT 60.142 45.833 20.37 0.00 38.40 1.94
64 65 3.377798 GGATCCGAGTCTCGTCTACTTTT 59.622 47.826 20.37 0.00 38.40 2.27
65 66 2.944349 GGATCCGAGTCTCGTCTACTTT 59.056 50.000 20.37 0.00 38.40 2.66
66 67 2.171027 AGGATCCGAGTCTCGTCTACTT 59.829 50.000 20.37 3.66 38.40 2.24
67 68 1.764134 AGGATCCGAGTCTCGTCTACT 59.236 52.381 20.37 10.36 38.40 2.57
68 69 2.243602 AGGATCCGAGTCTCGTCTAC 57.756 55.000 20.37 8.27 38.40 2.59
69 70 3.278668 AAAGGATCCGAGTCTCGTCTA 57.721 47.619 20.37 6.58 38.40 2.59
70 71 2.131776 AAAGGATCCGAGTCTCGTCT 57.868 50.000 20.37 7.45 38.40 4.18
71 72 2.531206 CAAAAGGATCCGAGTCTCGTC 58.469 52.381 20.37 12.19 38.40 4.20
72 73 1.404315 GCAAAAGGATCCGAGTCTCGT 60.404 52.381 20.37 3.17 38.40 4.18
73 74 1.134965 AGCAAAAGGATCCGAGTCTCG 60.135 52.381 15.53 15.53 40.07 4.04
74 75 2.682155 AGCAAAAGGATCCGAGTCTC 57.318 50.000 5.98 0.00 0.00 3.36
75 76 2.159226 CGTAGCAAAAGGATCCGAGTCT 60.159 50.000 5.98 4.12 0.00 3.24
76 77 2.194271 CGTAGCAAAAGGATCCGAGTC 58.806 52.381 5.98 0.00 0.00 3.36
77 78 1.549170 ACGTAGCAAAAGGATCCGAGT 59.451 47.619 5.98 0.00 0.00 4.18
78 79 2.295253 ACGTAGCAAAAGGATCCGAG 57.705 50.000 5.98 0.00 0.00 4.63
79 80 3.872511 TTACGTAGCAAAAGGATCCGA 57.127 42.857 5.98 0.00 0.00 4.55
80 81 4.390909 ACTTTTACGTAGCAAAAGGATCCG 59.609 41.667 20.48 0.00 43.94 4.18
81 82 5.874895 ACTTTTACGTAGCAAAAGGATCC 57.125 39.130 20.48 2.48 43.94 3.36
82 83 8.121086 GGATTACTTTTACGTAGCAAAAGGATC 58.879 37.037 20.48 19.93 43.94 3.36
83 84 7.608761 TGGATTACTTTTACGTAGCAAAAGGAT 59.391 33.333 20.48 15.17 43.94 3.24
84 85 6.935771 TGGATTACTTTTACGTAGCAAAAGGA 59.064 34.615 20.48 12.97 43.94 3.36
85 86 7.136289 TGGATTACTTTTACGTAGCAAAAGG 57.864 36.000 20.48 7.74 43.94 3.11
86 87 8.287503 AGTTGGATTACTTTTACGTAGCAAAAG 58.712 33.333 16.71 16.71 44.76 2.27
87 88 8.156994 AGTTGGATTACTTTTACGTAGCAAAA 57.843 30.769 0.00 0.00 0.00 2.44
88 89 7.733402 AGTTGGATTACTTTTACGTAGCAAA 57.267 32.000 0.00 0.00 0.00 3.68
89 90 9.439500 AATAGTTGGATTACTTTTACGTAGCAA 57.561 29.630 0.00 0.00 0.00 3.91
107 108 9.626045 GGAAAACTGACTTTCATTAATAGTTGG 57.374 33.333 0.00 0.00 37.09 3.77
115 116 9.408648 AGAAAAGAGGAAAACTGACTTTCATTA 57.591 29.630 0.00 0.00 37.09 1.90
116 117 8.298729 AGAAAAGAGGAAAACTGACTTTCATT 57.701 30.769 0.00 0.00 37.09 2.57
117 118 7.888250 AGAAAAGAGGAAAACTGACTTTCAT 57.112 32.000 0.00 2.86 37.09 2.57
118 119 8.980481 ATAGAAAAGAGGAAAACTGACTTTCA 57.020 30.769 0.00 0.00 37.09 2.69
125 126 9.912634 TGCATTAAATAGAAAAGAGGAAAACTG 57.087 29.630 0.00 0.00 0.00 3.16
126 127 9.914131 GTGCATTAAATAGAAAAGAGGAAAACT 57.086 29.630 0.00 0.00 0.00 2.66
127 128 9.691362 TGTGCATTAAATAGAAAAGAGGAAAAC 57.309 29.630 0.00 0.00 0.00 2.43
129 130 9.859427 CATGTGCATTAAATAGAAAAGAGGAAA 57.141 29.630 0.00 0.00 0.00 3.13
130 131 9.241919 TCATGTGCATTAAATAGAAAAGAGGAA 57.758 29.630 0.00 0.00 0.00 3.36
131 132 8.806429 TCATGTGCATTAAATAGAAAAGAGGA 57.194 30.769 0.00 0.00 0.00 3.71
134 135 9.806203 CCAATCATGTGCATTAAATAGAAAAGA 57.194 29.630 0.00 0.00 0.00 2.52
135 136 9.806203 TCCAATCATGTGCATTAAATAGAAAAG 57.194 29.630 0.00 0.00 0.00 2.27
137 138 9.752961 CATCCAATCATGTGCATTAAATAGAAA 57.247 29.630 0.00 0.00 0.00 2.52
138 139 9.134055 TCATCCAATCATGTGCATTAAATAGAA 57.866 29.630 0.00 0.00 0.00 2.10
139 140 8.570488 GTCATCCAATCATGTGCATTAAATAGA 58.430 33.333 0.00 0.00 0.00 1.98
140 141 7.811236 GGTCATCCAATCATGTGCATTAAATAG 59.189 37.037 0.00 0.00 0.00 1.73
141 142 7.521910 CGGTCATCCAATCATGTGCATTAAATA 60.522 37.037 0.00 0.00 0.00 1.40
142 143 6.518493 GGTCATCCAATCATGTGCATTAAAT 58.482 36.000 0.00 0.00 0.00 1.40
143 144 5.450274 CGGTCATCCAATCATGTGCATTAAA 60.450 40.000 0.00 0.00 0.00 1.52
144 145 4.036616 CGGTCATCCAATCATGTGCATTAA 59.963 41.667 0.00 0.00 0.00 1.40
145 146 3.565063 CGGTCATCCAATCATGTGCATTA 59.435 43.478 0.00 0.00 0.00 1.90
146 147 2.359848 CGGTCATCCAATCATGTGCATT 59.640 45.455 0.00 0.00 0.00 3.56
147 148 1.951602 CGGTCATCCAATCATGTGCAT 59.048 47.619 0.00 0.00 0.00 3.96
148 149 1.381522 CGGTCATCCAATCATGTGCA 58.618 50.000 0.00 0.00 0.00 4.57
149 150 0.029834 GCGGTCATCCAATCATGTGC 59.970 55.000 0.00 0.00 0.00 4.57
150 151 1.600957 GAGCGGTCATCCAATCATGTG 59.399 52.381 10.30 0.00 0.00 3.21
151 152 1.487976 AGAGCGGTCATCCAATCATGT 59.512 47.619 18.15 0.00 0.00 3.21
152 153 2.251409 AGAGCGGTCATCCAATCATG 57.749 50.000 18.15 0.00 0.00 3.07
153 154 2.968574 AGTAGAGCGGTCATCCAATCAT 59.031 45.455 18.15 0.00 0.00 2.45
154 155 2.388735 AGTAGAGCGGTCATCCAATCA 58.611 47.619 18.15 0.00 0.00 2.57
155 156 4.381079 GGATAGTAGAGCGGTCATCCAATC 60.381 50.000 20.74 14.22 33.60 2.67
156 157 3.511934 GGATAGTAGAGCGGTCATCCAAT 59.488 47.826 20.74 7.70 33.60 3.16
157 158 2.891580 GGATAGTAGAGCGGTCATCCAA 59.108 50.000 20.74 3.64 33.60 3.53
158 159 2.515854 GGATAGTAGAGCGGTCATCCA 58.484 52.381 20.74 4.57 33.60 3.41
159 160 1.469308 CGGATAGTAGAGCGGTCATCC 59.531 57.143 18.15 17.71 0.00 3.51
160 161 1.135632 GCGGATAGTAGAGCGGTCATC 60.136 57.143 18.15 10.48 0.00 2.92
161 162 0.882474 GCGGATAGTAGAGCGGTCAT 59.118 55.000 18.15 0.56 0.00 3.06
162 163 0.179026 AGCGGATAGTAGAGCGGTCA 60.179 55.000 18.15 0.00 34.34 4.02
163 164 0.518195 GAGCGGATAGTAGAGCGGTC 59.482 60.000 6.48 6.48 34.34 4.79
164 165 0.108963 AGAGCGGATAGTAGAGCGGT 59.891 55.000 0.00 0.00 34.34 5.68
165 166 0.800012 GAGAGCGGATAGTAGAGCGG 59.200 60.000 0.00 0.00 34.34 5.52
166 167 0.440758 CGAGAGCGGATAGTAGAGCG 59.559 60.000 0.00 0.00 34.34 5.03
179 180 2.167861 GGATGTGTTCGCCGAGAGC 61.168 63.158 0.00 0.00 38.52 4.09
180 181 0.389817 TTGGATGTGTTCGCCGAGAG 60.390 55.000 0.00 0.00 0.00 3.20
181 182 0.034198 TTTGGATGTGTTCGCCGAGA 59.966 50.000 0.00 0.00 0.00 4.04
182 183 0.165944 GTTTGGATGTGTTCGCCGAG 59.834 55.000 0.00 0.00 0.00 4.63
183 184 1.561717 CGTTTGGATGTGTTCGCCGA 61.562 55.000 0.00 0.00 0.00 5.54
184 185 1.154488 CGTTTGGATGTGTTCGCCG 60.154 57.895 0.00 0.00 0.00 6.46
185 186 0.110373 GACGTTTGGATGTGTTCGCC 60.110 55.000 0.00 0.00 0.00 5.54
186 187 0.110373 GGACGTTTGGATGTGTTCGC 60.110 55.000 0.00 0.00 0.00 4.70
187 188 1.070175 GTGGACGTTTGGATGTGTTCG 60.070 52.381 0.00 0.00 0.00 3.95
188 189 1.070175 CGTGGACGTTTGGATGTGTTC 60.070 52.381 0.00 0.00 34.11 3.18
189 190 0.941542 CGTGGACGTTTGGATGTGTT 59.058 50.000 0.00 0.00 34.11 3.32
190 191 0.882927 CCGTGGACGTTTGGATGTGT 60.883 55.000 0.00 0.00 37.74 3.72
191 192 1.573829 CCCGTGGACGTTTGGATGTG 61.574 60.000 0.00 0.00 37.74 3.21
192 193 1.302192 CCCGTGGACGTTTGGATGT 60.302 57.895 0.00 0.00 37.74 3.06
193 194 2.686816 GCCCGTGGACGTTTGGATG 61.687 63.158 0.00 0.00 37.74 3.51
194 195 2.359478 GCCCGTGGACGTTTGGAT 60.359 61.111 0.00 0.00 37.74 3.41
195 196 2.684192 AATGCCCGTGGACGTTTGGA 62.684 55.000 0.00 0.00 37.74 3.53
196 197 1.801309 AAATGCCCGTGGACGTTTGG 61.801 55.000 0.00 0.00 37.74 3.28
197 198 0.662970 CAAATGCCCGTGGACGTTTG 60.663 55.000 5.65 5.65 37.74 2.93
198 199 1.657556 CAAATGCCCGTGGACGTTT 59.342 52.632 0.00 0.00 37.74 3.60
199 200 2.265182 CCAAATGCCCGTGGACGTT 61.265 57.895 0.00 0.00 37.03 3.99
200 201 2.671619 CCAAATGCCCGTGGACGT 60.672 61.111 0.00 0.00 37.03 4.34
201 202 2.671619 ACCAAATGCCCGTGGACG 60.672 61.111 3.83 0.00 38.36 4.79
202 203 1.862602 GACACCAAATGCCCGTGGAC 61.863 60.000 3.83 0.00 38.36 4.02
203 204 1.602323 GACACCAAATGCCCGTGGA 60.602 57.895 3.83 0.00 38.36 4.02
204 205 2.961768 GACACCAAATGCCCGTGG 59.038 61.111 0.00 0.00 41.00 4.94
205 206 2.182614 GACGACACCAAATGCCCGTG 62.183 60.000 0.00 0.00 39.89 4.94
206 207 1.964373 GACGACACCAAATGCCCGT 60.964 57.895 0.00 0.00 41.69 5.28
207 208 2.686816 GGACGACACCAAATGCCCG 61.687 63.158 0.00 0.00 34.81 6.13
208 209 2.686816 CGGACGACACCAAATGCCC 61.687 63.158 0.00 0.00 0.00 5.36
209 210 1.231958 TTCGGACGACACCAAATGCC 61.232 55.000 0.00 0.00 0.00 4.40
210 211 0.165944 CTTCGGACGACACCAAATGC 59.834 55.000 0.00 0.00 0.00 3.56
211 212 1.459592 GTCTTCGGACGACACCAAATG 59.540 52.381 9.50 0.00 35.10 2.32
212 213 1.792006 GTCTTCGGACGACACCAAAT 58.208 50.000 9.50 0.00 35.10 2.32
213 214 3.277652 GTCTTCGGACGACACCAAA 57.722 52.632 9.50 0.00 35.10 3.28
222 223 2.087009 CGCGGTTCTGTCTTCGGAC 61.087 63.158 0.00 0.00 44.66 4.79
223 224 2.257371 CGCGGTTCTGTCTTCGGA 59.743 61.111 0.00 0.00 0.00 4.55
224 225 2.049433 ACGCGGTTCTGTCTTCGG 60.049 61.111 12.47 0.00 0.00 4.30
225 226 2.426183 CGACGCGGTTCTGTCTTCG 61.426 63.158 12.47 2.89 32.93 3.79
226 227 2.087009 CCGACGCGGTTCTGTCTTC 61.087 63.158 12.47 0.00 42.73 2.87
227 228 2.049433 CCGACGCGGTTCTGTCTT 60.049 61.111 12.47 0.00 42.73 3.01
237 238 2.152699 CACAAGCTACTCCGACGCG 61.153 63.158 3.53 3.53 0.00 6.01
238 239 2.445438 GCACAAGCTACTCCGACGC 61.445 63.158 0.00 0.00 37.91 5.19
239 240 2.152699 CGCACAAGCTACTCCGACG 61.153 63.158 0.00 0.00 39.10 5.12
240 241 2.445438 GCGCACAAGCTACTCCGAC 61.445 63.158 0.30 0.00 39.10 4.79
241 242 2.126071 GCGCACAAGCTACTCCGA 60.126 61.111 0.30 0.00 39.10 4.55
242 243 1.811266 ATGCGCACAAGCTACTCCG 60.811 57.895 14.90 0.00 39.10 4.63
243 244 0.740868 TCATGCGCACAAGCTACTCC 60.741 55.000 14.90 0.00 39.10 3.85
244 245 0.371645 GTCATGCGCACAAGCTACTC 59.628 55.000 14.90 0.00 39.10 2.59
245 246 0.036952 AGTCATGCGCACAAGCTACT 60.037 50.000 14.90 7.28 39.10 2.57
246 247 0.095935 CAGTCATGCGCACAAGCTAC 59.904 55.000 14.90 4.80 39.10 3.58
247 248 0.037419 TCAGTCATGCGCACAAGCTA 60.037 50.000 14.90 0.00 39.10 3.32
248 249 1.301953 TCAGTCATGCGCACAAGCT 60.302 52.632 14.90 5.95 39.10 3.74
249 250 1.154338 GTCAGTCATGCGCACAAGC 60.154 57.895 14.90 3.23 37.71 4.01
250 251 0.165295 CAGTCAGTCATGCGCACAAG 59.835 55.000 14.90 6.04 0.00 3.16
251 252 0.532640 ACAGTCAGTCATGCGCACAA 60.533 50.000 14.90 0.00 0.00 3.33
252 253 0.532640 AACAGTCAGTCATGCGCACA 60.533 50.000 14.90 0.00 0.00 4.57
253 254 0.164647 GAACAGTCAGTCATGCGCAC 59.835 55.000 14.90 0.00 0.00 5.34
254 255 1.284297 CGAACAGTCAGTCATGCGCA 61.284 55.000 14.96 14.96 0.00 6.09
255 256 1.284982 ACGAACAGTCAGTCATGCGC 61.285 55.000 0.00 0.00 0.00 6.09
256 257 0.436150 CACGAACAGTCAGTCATGCG 59.564 55.000 0.00 0.00 0.00 4.73
257 258 0.792640 CCACGAACAGTCAGTCATGC 59.207 55.000 0.00 0.00 0.00 4.06
258 259 2.061773 GTCCACGAACAGTCAGTCATG 58.938 52.381 0.00 0.00 0.00 3.07
259 260 1.000955 GGTCCACGAACAGTCAGTCAT 59.999 52.381 0.00 0.00 0.00 3.06
260 261 0.387929 GGTCCACGAACAGTCAGTCA 59.612 55.000 0.00 0.00 0.00 3.41
261 262 3.196613 GGTCCACGAACAGTCAGTC 57.803 57.895 0.00 0.00 0.00 3.51
272 273 2.261671 CTCTGGTTCCGGTCCACG 59.738 66.667 14.99 11.85 43.80 4.94
273 274 1.004918 CACTCTGGTTCCGGTCCAC 60.005 63.158 14.99 5.08 0.00 4.02
274 275 1.152419 TCACTCTGGTTCCGGTCCA 60.152 57.895 17.21 17.21 0.00 4.02
275 276 0.898789 TCTCACTCTGGTTCCGGTCC 60.899 60.000 0.00 6.41 0.00 4.46
276 277 0.966920 TTCTCACTCTGGTTCCGGTC 59.033 55.000 0.00 0.00 0.00 4.79
277 278 1.420430 TTTCTCACTCTGGTTCCGGT 58.580 50.000 0.00 0.00 0.00 5.28
278 279 2.543777 TTTTCTCACTCTGGTTCCGG 57.456 50.000 0.00 0.00 0.00 5.14
279 280 3.664107 TGATTTTCTCACTCTGGTTCCG 58.336 45.455 0.00 0.00 0.00 4.30
280 281 5.474876 ACATTGATTTTCTCACTCTGGTTCC 59.525 40.000 0.00 0.00 32.17 3.62
281 282 6.376978 CACATTGATTTTCTCACTCTGGTTC 58.623 40.000 0.00 0.00 32.17 3.62
282 283 5.278660 GCACATTGATTTTCTCACTCTGGTT 60.279 40.000 0.00 0.00 32.17 3.67
283 284 4.217118 GCACATTGATTTTCTCACTCTGGT 59.783 41.667 0.00 0.00 32.17 4.00
284 285 4.380233 GGCACATTGATTTTCTCACTCTGG 60.380 45.833 0.00 0.00 32.17 3.86
285 286 4.216902 TGGCACATTGATTTTCTCACTCTG 59.783 41.667 0.00 0.00 32.17 3.35
286 287 4.217118 GTGGCACATTGATTTTCTCACTCT 59.783 41.667 13.86 0.00 44.52 3.24
287 288 4.217118 AGTGGCACATTGATTTTCTCACTC 59.783 41.667 21.41 0.00 44.52 3.51
288 289 4.147321 AGTGGCACATTGATTTTCTCACT 58.853 39.130 21.41 0.00 44.52 3.41
289 290 4.510038 AGTGGCACATTGATTTTCTCAC 57.490 40.909 21.41 0.00 44.52 3.51
312 313 1.009675 CTATCACGCGGGCAATTGC 60.010 57.895 22.47 22.47 41.14 3.56
313 314 1.009675 GCTATCACGCGGGCAATTG 60.010 57.895 12.47 0.00 0.00 2.32
314 315 0.105964 TAGCTATCACGCGGGCAATT 59.894 50.000 12.47 0.00 34.40 2.32
315 316 0.319900 CTAGCTATCACGCGGGCAAT 60.320 55.000 12.47 0.00 34.40 3.56
316 317 1.067416 CTAGCTATCACGCGGGCAA 59.933 57.895 12.47 0.00 34.40 4.52
317 318 1.796190 CTCTAGCTATCACGCGGGCA 61.796 60.000 12.47 0.00 34.40 5.36
318 319 1.081108 CTCTAGCTATCACGCGGGC 60.081 63.158 12.47 6.62 34.40 6.13
319 320 0.238817 GTCTCTAGCTATCACGCGGG 59.761 60.000 12.47 6.51 34.40 6.13
320 321 0.945099 TGTCTCTAGCTATCACGCGG 59.055 55.000 12.47 0.00 34.40 6.46
321 322 2.979401 ATGTCTCTAGCTATCACGCG 57.021 50.000 3.53 3.53 34.40 6.01
322 323 4.101942 GCATATGTCTCTAGCTATCACGC 58.898 47.826 4.29 0.00 0.00 5.34
323 324 4.397730 AGGCATATGTCTCTAGCTATCACG 59.602 45.833 3.33 0.00 0.00 4.35
324 325 5.163561 GGAGGCATATGTCTCTAGCTATCAC 60.164 48.000 30.85 11.86 45.60 3.06
325 326 4.952957 GGAGGCATATGTCTCTAGCTATCA 59.047 45.833 30.85 0.00 45.60 2.15
326 327 4.340950 GGGAGGCATATGTCTCTAGCTATC 59.659 50.000 30.85 15.78 45.60 2.08
327 328 4.016666 AGGGAGGCATATGTCTCTAGCTAT 60.017 45.833 30.85 12.21 45.60 2.97
328 329 3.335183 AGGGAGGCATATGTCTCTAGCTA 59.665 47.826 30.85 0.00 45.60 3.32
329 330 2.111613 AGGGAGGCATATGTCTCTAGCT 59.888 50.000 30.85 0.54 45.60 3.32
330 331 2.534990 AGGGAGGCATATGTCTCTAGC 58.465 52.381 30.85 17.67 45.60 3.42
331 332 3.306641 GCAAGGGAGGCATATGTCTCTAG 60.307 52.174 30.85 20.27 45.60 2.43
332 333 2.634940 GCAAGGGAGGCATATGTCTCTA 59.365 50.000 30.85 0.00 45.60 2.43
333 334 1.419387 GCAAGGGAGGCATATGTCTCT 59.581 52.381 30.85 14.21 45.60 3.10
334 335 1.419387 AGCAAGGGAGGCATATGTCTC 59.581 52.381 26.09 26.09 45.58 3.36
335 336 1.419387 GAGCAAGGGAGGCATATGTCT 59.581 52.381 10.24 10.24 0.00 3.41
336 337 1.419387 AGAGCAAGGGAGGCATATGTC 59.581 52.381 0.00 0.00 0.00 3.06
337 338 1.142465 CAGAGCAAGGGAGGCATATGT 59.858 52.381 4.29 0.00 0.00 2.29
338 339 1.419012 TCAGAGCAAGGGAGGCATATG 59.581 52.381 0.00 0.00 0.00 1.78
339 340 1.811778 TCAGAGCAAGGGAGGCATAT 58.188 50.000 0.00 0.00 0.00 1.78
340 341 1.487976 CTTCAGAGCAAGGGAGGCATA 59.512 52.381 0.00 0.00 0.00 3.14
341 342 0.255318 CTTCAGAGCAAGGGAGGCAT 59.745 55.000 0.00 0.00 0.00 4.40
342 343 1.130054 ACTTCAGAGCAAGGGAGGCA 61.130 55.000 0.00 0.00 0.00 4.75
343 344 0.037447 AACTTCAGAGCAAGGGAGGC 59.963 55.000 0.00 0.00 0.00 4.70
344 345 1.627834 AGAACTTCAGAGCAAGGGAGG 59.372 52.381 0.00 0.00 0.00 4.30
345 346 2.566724 AGAGAACTTCAGAGCAAGGGAG 59.433 50.000 0.00 0.00 0.00 4.30
346 347 2.614259 AGAGAACTTCAGAGCAAGGGA 58.386 47.619 0.00 0.00 0.00 4.20
347 348 3.368948 GGTAGAGAACTTCAGAGCAAGGG 60.369 52.174 0.00 0.00 0.00 3.95
348 349 3.259374 TGGTAGAGAACTTCAGAGCAAGG 59.741 47.826 0.00 0.00 0.00 3.61
349 350 4.021544 ACTGGTAGAGAACTTCAGAGCAAG 60.022 45.833 0.00 0.00 33.64 4.01
350 351 3.898123 ACTGGTAGAGAACTTCAGAGCAA 59.102 43.478 0.00 0.00 33.64 3.91
351 352 3.501349 ACTGGTAGAGAACTTCAGAGCA 58.499 45.455 0.00 0.00 33.64 4.26
352 353 4.944930 TCTACTGGTAGAGAACTTCAGAGC 59.055 45.833 6.39 0.00 37.28 4.09
353 354 5.941058 TGTCTACTGGTAGAGAACTTCAGAG 59.059 44.000 10.32 0.00 42.31 3.35
354 355 5.877491 TGTCTACTGGTAGAGAACTTCAGA 58.123 41.667 10.32 0.00 42.31 3.27
355 356 6.767524 ATGTCTACTGGTAGAGAACTTCAG 57.232 41.667 10.32 0.00 42.31 3.02
356 357 8.645814 TTAATGTCTACTGGTAGAGAACTTCA 57.354 34.615 10.32 5.19 42.31 3.02
360 361 9.465985 GCTAATTAATGTCTACTGGTAGAGAAC 57.534 37.037 10.32 1.88 42.31 3.01
361 362 8.639761 GGCTAATTAATGTCTACTGGTAGAGAA 58.360 37.037 10.32 3.74 42.31 2.87
362 363 7.040617 CGGCTAATTAATGTCTACTGGTAGAGA 60.041 40.741 10.32 9.88 42.31 3.10
363 364 7.085116 CGGCTAATTAATGTCTACTGGTAGAG 58.915 42.308 10.32 0.00 42.31 2.43
364 365 6.548622 ACGGCTAATTAATGTCTACTGGTAGA 59.451 38.462 6.39 6.39 39.67 2.59
365 366 6.746120 ACGGCTAATTAATGTCTACTGGTAG 58.254 40.000 1.65 1.65 34.56 3.18
366 367 6.513884 CGACGGCTAATTAATGTCTACTGGTA 60.514 42.308 8.76 0.00 0.00 3.25
367 368 5.598769 GACGGCTAATTAATGTCTACTGGT 58.401 41.667 0.00 0.00 0.00 4.00
368 369 4.680110 CGACGGCTAATTAATGTCTACTGG 59.320 45.833 8.76 0.00 0.00 4.00
369 370 5.279384 ACGACGGCTAATTAATGTCTACTG 58.721 41.667 0.00 0.00 0.00 2.74
370 371 5.511234 ACGACGGCTAATTAATGTCTACT 57.489 39.130 0.00 0.00 0.00 2.57
399 400 6.808008 TCTTCATGAAAGAAACAAGCTAGG 57.192 37.500 9.88 0.00 41.10 3.02
405 411 7.822161 TGGAGAATCTTCATGAAAGAAACAA 57.178 32.000 9.88 0.00 46.85 2.83
414 420 3.196469 AGCTCGTTGGAGAATCTTCATGA 59.804 43.478 0.00 0.00 43.27 3.07
417 423 3.329386 CAAGCTCGTTGGAGAATCTTCA 58.671 45.455 0.00 0.00 43.27 3.02
418 424 2.095053 GCAAGCTCGTTGGAGAATCTTC 59.905 50.000 0.00 0.00 43.27 2.87
428 434 0.031178 AAGCCAAAGCAAGCTCGTTG 59.969 50.000 0.00 0.00 43.56 4.10
478 484 7.122055 AGTGAGAACTCGAGAGATCTTTGTAAT 59.878 37.037 21.68 4.86 40.11 1.89
488 494 3.055747 TCTGCTAGTGAGAACTCGAGAGA 60.056 47.826 21.68 3.56 39.12 3.10
489 495 3.266636 TCTGCTAGTGAGAACTCGAGAG 58.733 50.000 21.68 4.14 0.00 3.20
512 518 2.260869 GGAGTTTTCCGCAGCAGCA 61.261 57.895 0.82 0.00 42.27 4.41
555 561 2.744709 GGCTAGCCGTTTTCCGCA 60.745 61.111 20.16 0.00 34.38 5.69
556 562 2.744709 TGGCTAGCCGTTTTCCGC 60.745 61.111 28.28 1.95 39.42 5.54
558 564 2.396157 CCGTGGCTAGCCGTTTTCC 61.396 63.158 28.28 10.67 39.42 3.13
560 566 3.053896 GCCGTGGCTAGCCGTTTT 61.054 61.111 28.28 0.00 39.42 2.43
568 588 0.679640 CCTCCAAATTGCCGTGGCTA 60.680 55.000 12.84 4.76 42.51 3.93
580 600 0.410663 TAGGTCGGTCTCCCTCCAAA 59.589 55.000 0.00 0.00 32.08 3.28
581 601 0.033405 CTAGGTCGGTCTCCCTCCAA 60.033 60.000 0.00 0.00 32.08 3.53
619 641 2.593436 CGGTGCGGGGTCAAAGTT 60.593 61.111 0.00 0.00 0.00 2.66
654 691 2.196319 GCATTTCCAGCCTTCCAGG 58.804 57.895 0.00 0.00 38.80 4.45
668 705 4.895668 AACTGAAACAATCCATGGCATT 57.104 36.364 6.96 5.24 0.00 3.56
723 783 4.095036 CGTGACTTAGCTGATCAGTAGACA 59.905 45.833 23.38 19.04 0.00 3.41
743 803 2.581637 CCGGTATACATGTCGATCGTG 58.418 52.381 15.94 8.86 38.86 4.35
744 804 1.538512 CCCGGTATACATGTCGATCGT 59.461 52.381 15.94 0.00 0.00 3.73
774 840 1.599542 CTAGAATTACTTGGCGCCAGC 59.400 52.381 30.75 13.52 44.18 4.85
802 868 9.685005 GTGTGTTTACGTGATAGATTTAATGAC 57.315 33.333 0.00 0.00 0.00 3.06
803 869 9.425577 TGTGTGTTTACGTGATAGATTTAATGA 57.574 29.630 0.00 0.00 0.00 2.57
808 874 7.485418 TTGTGTGTGTTTACGTGATAGATTT 57.515 32.000 0.00 0.00 0.00 2.17
809 875 7.386573 TGATTGTGTGTGTTTACGTGATAGATT 59.613 33.333 0.00 0.00 0.00 2.40
810 876 6.871492 TGATTGTGTGTGTTTACGTGATAGAT 59.129 34.615 0.00 0.00 0.00 1.98
811 877 6.217294 TGATTGTGTGTGTTTACGTGATAGA 58.783 36.000 0.00 0.00 0.00 1.98
812 878 6.460664 TGATTGTGTGTGTTTACGTGATAG 57.539 37.500 0.00 0.00 0.00 2.08
813 879 5.107259 GCTGATTGTGTGTGTTTACGTGATA 60.107 40.000 0.00 0.00 0.00 2.15
814 880 4.319477 GCTGATTGTGTGTGTTTACGTGAT 60.319 41.667 0.00 0.00 0.00 3.06
815 881 3.001838 GCTGATTGTGTGTGTTTACGTGA 59.998 43.478 0.00 0.00 0.00 4.35
816 882 3.002246 AGCTGATTGTGTGTGTTTACGTG 59.998 43.478 0.00 0.00 0.00 4.49
817 883 3.002246 CAGCTGATTGTGTGTGTTTACGT 59.998 43.478 8.42 0.00 0.00 3.57
818 884 3.247411 TCAGCTGATTGTGTGTGTTTACG 59.753 43.478 13.74 0.00 0.00 3.18
819 885 4.273480 ACTCAGCTGATTGTGTGTGTTTAC 59.727 41.667 18.63 0.00 0.00 2.01
820 886 4.273235 CACTCAGCTGATTGTGTGTGTTTA 59.727 41.667 22.37 0.00 37.63 2.01
821 887 3.065786 CACTCAGCTGATTGTGTGTGTTT 59.934 43.478 22.37 0.00 37.63 2.83
822 888 2.615447 CACTCAGCTGATTGTGTGTGTT 59.385 45.455 22.37 0.00 37.63 3.32
823 889 2.216046 CACTCAGCTGATTGTGTGTGT 58.784 47.619 22.37 10.06 37.63 3.72
824 890 2.963498 CACTCAGCTGATTGTGTGTG 57.037 50.000 22.37 18.45 37.63 3.82
825 891 2.627515 ACACTCAGCTGATTGTGTGT 57.372 45.000 31.83 28.55 45.63 3.72
890 958 4.512944 CAGCTACACATCTCTCTCTCTCTC 59.487 50.000 0.00 0.00 0.00 3.20
891 959 4.454678 CAGCTACACATCTCTCTCTCTCT 58.545 47.826 0.00 0.00 0.00 3.10
892 960 3.565482 CCAGCTACACATCTCTCTCTCTC 59.435 52.174 0.00 0.00 0.00 3.20
893 961 3.053693 ACCAGCTACACATCTCTCTCTCT 60.054 47.826 0.00 0.00 0.00 3.10
894 962 3.287222 ACCAGCTACACATCTCTCTCTC 58.713 50.000 0.00 0.00 0.00 3.20
895 963 3.287222 GACCAGCTACACATCTCTCTCT 58.713 50.000 0.00 0.00 0.00 3.10
896 964 3.020274 TGACCAGCTACACATCTCTCTC 58.980 50.000 0.00 0.00 0.00 3.20
897 965 3.093057 TGACCAGCTACACATCTCTCT 57.907 47.619 0.00 0.00 0.00 3.10
907 975 5.392380 CCAGTTCATTTCATTGACCAGCTAC 60.392 44.000 0.00 0.00 0.00 3.58
909 977 3.508793 CCAGTTCATTTCATTGACCAGCT 59.491 43.478 0.00 0.00 0.00 4.24
934 1002 1.147376 TTGTGGTTGTACGCCAGCT 59.853 52.632 8.96 0.00 36.57 4.24
937 1005 1.687660 TCTAGTTGTGGTTGTACGCCA 59.312 47.619 5.03 5.03 0.00 5.69
938 1006 2.443887 TCTAGTTGTGGTTGTACGCC 57.556 50.000 0.00 0.00 0.00 5.68
939 1007 2.477754 GGTTCTAGTTGTGGTTGTACGC 59.522 50.000 0.00 0.00 0.00 4.42
941 1009 4.444536 TGTGGTTCTAGTTGTGGTTGTAC 58.555 43.478 0.00 0.00 0.00 2.90
942 1010 4.406326 TCTGTGGTTCTAGTTGTGGTTGTA 59.594 41.667 0.00 0.00 0.00 2.41
943 1011 3.199071 TCTGTGGTTCTAGTTGTGGTTGT 59.801 43.478 0.00 0.00 0.00 3.32
944 1012 3.560068 GTCTGTGGTTCTAGTTGTGGTTG 59.440 47.826 0.00 0.00 0.00 3.77
945 1013 3.454812 AGTCTGTGGTTCTAGTTGTGGTT 59.545 43.478 0.00 0.00 0.00 3.67
946 1014 3.039011 AGTCTGTGGTTCTAGTTGTGGT 58.961 45.455 0.00 0.00 0.00 4.16
947 1015 3.069586 TGAGTCTGTGGTTCTAGTTGTGG 59.930 47.826 0.00 0.00 0.00 4.17
948 1016 4.322080 TGAGTCTGTGGTTCTAGTTGTG 57.678 45.455 0.00 0.00 0.00 3.33
949 1017 4.321304 CGATGAGTCTGTGGTTCTAGTTGT 60.321 45.833 0.00 0.00 0.00 3.32
950 1018 4.169508 CGATGAGTCTGTGGTTCTAGTTG 58.830 47.826 0.00 0.00 0.00 3.16
951 1019 3.367498 GCGATGAGTCTGTGGTTCTAGTT 60.367 47.826 0.00 0.00 0.00 2.24
952 1020 2.164624 GCGATGAGTCTGTGGTTCTAGT 59.835 50.000 0.00 0.00 0.00 2.57
953 1021 2.425312 AGCGATGAGTCTGTGGTTCTAG 59.575 50.000 0.00 0.00 0.00 2.43
954 1022 2.447443 AGCGATGAGTCTGTGGTTCTA 58.553 47.619 0.00 0.00 0.00 2.10
955 1023 1.261480 AGCGATGAGTCTGTGGTTCT 58.739 50.000 0.00 0.00 0.00 3.01
956 1024 1.996191 GAAGCGATGAGTCTGTGGTTC 59.004 52.381 0.00 0.00 0.00 3.62
957 1025 1.344438 TGAAGCGATGAGTCTGTGGTT 59.656 47.619 0.00 0.00 0.00 3.67
964 1032 1.135489 TGGTACGTGAAGCGATGAGTC 60.135 52.381 0.00 0.00 44.77 3.36
971 1039 0.796312 ATGCTTTGGTACGTGAAGCG 59.204 50.000 16.56 0.00 46.59 4.68
973 1041 2.416547 CCTGATGCTTTGGTACGTGAAG 59.583 50.000 0.00 0.00 0.00 3.02
983 1051 1.404986 CCATGGTTGCCTGATGCTTTG 60.405 52.381 2.57 0.00 42.00 2.77
984 1052 0.899720 CCATGGTTGCCTGATGCTTT 59.100 50.000 2.57 0.00 42.00 3.51
986 1054 2.056223 GCCATGGTTGCCTGATGCT 61.056 57.895 14.67 0.00 42.00 3.79
987 1055 2.292794 CTGCCATGGTTGCCTGATGC 62.293 60.000 14.67 0.00 41.77 3.91
988 1056 1.813859 CTGCCATGGTTGCCTGATG 59.186 57.895 14.67 0.00 0.00 3.07
990 1058 2.677524 GCTGCCATGGTTGCCTGA 60.678 61.111 14.67 0.00 0.00 3.86
991 1059 2.678934 AGCTGCCATGGTTGCCTG 60.679 61.111 21.71 8.16 0.00 4.85
996 1064 1.968017 CGTCACAGCTGCCATGGTT 60.968 57.895 15.27 0.00 0.00 3.67
998 1066 3.807538 GCGTCACAGCTGCCATGG 61.808 66.667 15.27 7.63 0.00 3.66
1034 1139 2.915137 CTAGAGCGAGGAGGGCCC 60.915 72.222 16.46 16.46 33.31 5.80
1035 1140 2.123640 ACTAGAGCGAGGAGGGCC 60.124 66.667 0.00 0.00 0.00 5.80
1036 1141 3.124686 CACTAGAGCGAGGAGGGC 58.875 66.667 0.00 0.00 0.00 5.19
1050 1161 2.996168 AAGCGCCGAACAGAAGCACT 62.996 55.000 2.29 0.00 0.00 4.40
1116 1233 3.238497 CCCACGTCCACCACCTGA 61.238 66.667 0.00 0.00 0.00 3.86
1164 1281 0.534877 TGCACGTCCAGCTGATGTTT 60.535 50.000 17.39 0.00 41.36 2.83
1186 1303 0.321122 AAGTCCTCGAAAGCCAGCTG 60.321 55.000 6.78 6.78 0.00 4.24
1195 1312 0.674581 TCGGCGTAGAAGTCCTCGAA 60.675 55.000 6.85 0.00 0.00 3.71
1333 1453 2.928801 TAGTGCCTGCTCAGTTTGAA 57.071 45.000 0.00 0.00 0.00 2.69
1570 1727 3.877508 GGCAAGTTACGGAGCAATTCTAT 59.122 43.478 0.00 0.00 0.00 1.98
1729 1887 4.110036 GCCTCGGCTATTGTTTTCAAAT 57.890 40.909 0.00 0.00 39.59 2.32
1788 1946 1.451747 GAGGACGAGGAGTAGCGGT 60.452 63.158 0.00 0.00 0.00 5.68
1830 1988 5.609483 CGGCTTTGTTTTTCAAGATAAACGC 60.609 40.000 10.18 8.06 35.80 4.84
1939 2098 7.552687 CCACTAACCAGTTCATTCAAGCTTATA 59.447 37.037 0.00 0.00 30.46 0.98
2295 2455 6.099269 ACCATCGAAGCTAGGGTTTTTCTATA 59.901 38.462 0.00 0.00 0.00 1.31
2464 2625 5.220854 CCCGTCTTTCCAATAGCAATTAGTG 60.221 44.000 0.00 0.00 0.00 2.74
2465 2626 4.881850 CCCGTCTTTCCAATAGCAATTAGT 59.118 41.667 0.00 0.00 0.00 2.24
2466 2627 4.261197 GCCCGTCTTTCCAATAGCAATTAG 60.261 45.833 0.00 0.00 0.00 1.73
2467 2628 3.630312 GCCCGTCTTTCCAATAGCAATTA 59.370 43.478 0.00 0.00 0.00 1.40
2468 2629 2.427095 GCCCGTCTTTCCAATAGCAATT 59.573 45.455 0.00 0.00 0.00 2.32
2469 2630 2.024414 GCCCGTCTTTCCAATAGCAAT 58.976 47.619 0.00 0.00 0.00 3.56
2470 2631 1.271652 TGCCCGTCTTTCCAATAGCAA 60.272 47.619 0.00 0.00 0.00 3.91
2471 2632 0.326595 TGCCCGTCTTTCCAATAGCA 59.673 50.000 0.00 0.00 0.00 3.49
2472 2633 0.733150 GTGCCCGTCTTTCCAATAGC 59.267 55.000 0.00 0.00 0.00 2.97
2473 2634 2.107950 TGTGCCCGTCTTTCCAATAG 57.892 50.000 0.00 0.00 0.00 1.73
2474 2635 2.364632 CATGTGCCCGTCTTTCCAATA 58.635 47.619 0.00 0.00 0.00 1.90
2475 2636 1.176527 CATGTGCCCGTCTTTCCAAT 58.823 50.000 0.00 0.00 0.00 3.16
2476 2637 0.893270 CCATGTGCCCGTCTTTCCAA 60.893 55.000 0.00 0.00 0.00 3.53
2477 2638 1.303236 CCATGTGCCCGTCTTTCCA 60.303 57.895 0.00 0.00 0.00 3.53
2478 2639 2.046285 CCCATGTGCCCGTCTTTCC 61.046 63.158 0.00 0.00 0.00 3.13
2479 2640 2.700773 GCCCATGTGCCCGTCTTTC 61.701 63.158 0.00 0.00 0.00 2.62
2480 2641 2.676471 GCCCATGTGCCCGTCTTT 60.676 61.111 0.00 0.00 0.00 2.52
2481 2642 4.740822 GGCCCATGTGCCCGTCTT 62.741 66.667 8.18 0.00 46.11 3.01
2513 2674 5.514659 CCCAAAAGATTAGGCCCATGTTTTT 60.515 40.000 14.57 7.93 27.54 1.94
2518 2679 2.431782 CACCCAAAAGATTAGGCCCATG 59.568 50.000 0.00 0.00 0.00 3.66
2530 2692 0.684153 ATGATCGGCCCACCCAAAAG 60.684 55.000 0.00 0.00 0.00 2.27
2562 2724 6.803366 ATATACGGAAGGTTGGTCTTAAGT 57.197 37.500 1.63 0.00 0.00 2.24
2565 2727 7.902920 AACTATATACGGAAGGTTGGTCTTA 57.097 36.000 0.00 0.00 0.00 2.10
2567 2729 6.155737 ACAAACTATATACGGAAGGTTGGTCT 59.844 38.462 0.86 0.00 41.28 3.85
2568 2730 6.343703 ACAAACTATATACGGAAGGTTGGTC 58.656 40.000 0.86 0.00 41.28 4.02
2573 2753 4.964262 TGGGACAAACTATATACGGAAGGT 59.036 41.667 0.00 0.00 31.92 3.50
2592 2772 3.009275 CACTGATGGGCCATGGGA 58.991 61.111 26.77 6.52 0.00 4.37
2603 2783 3.971453 CTCGCCGTGTCGCACTGAT 62.971 63.158 8.07 0.00 31.34 2.90
2609 2789 4.796231 ATGGACTCGCCGTGTCGC 62.796 66.667 12.51 6.95 40.66 5.19
2610 2790 2.880879 CATGGACTCGCCGTGTCG 60.881 66.667 12.51 0.00 46.65 4.35
2614 2794 3.740128 GATGCCATGGACTCGCCGT 62.740 63.158 18.40 0.00 40.66 5.68
2615 2795 2.969238 GATGCCATGGACTCGCCG 60.969 66.667 18.40 0.00 40.66 6.46
2616 2796 2.592861 GGATGCCATGGACTCGCC 60.593 66.667 18.40 4.81 37.10 5.54
2617 2797 2.969238 CGGATGCCATGGACTCGC 60.969 66.667 18.40 0.00 0.00 5.03
2618 2798 2.280389 CCGGATGCCATGGACTCG 60.280 66.667 18.40 12.66 0.00 4.18
2619 2799 2.592861 GCCGGATGCCATGGACTC 60.593 66.667 18.40 10.75 0.00 3.36
2620 2800 3.410628 TGCCGGATGCCATGGACT 61.411 61.111 18.40 0.00 40.16 3.85
2621 2801 2.903855 CTGCCGGATGCCATGGAC 60.904 66.667 18.40 7.64 40.16 4.02
2622 2802 4.193893 CCTGCCGGATGCCATGGA 62.194 66.667 18.40 0.31 40.16 3.41
2651 2837 4.515567 AGTGAAAAGAAGTAGAAAAGGGCG 59.484 41.667 0.00 0.00 0.00 6.13
2672 2863 4.778143 GCCGGCGACATGGGAAGT 62.778 66.667 12.58 0.00 0.00 3.01
2725 2916 3.603857 CGGTGTCGAAACAAGCAAGTAAG 60.604 47.826 8.27 0.00 37.08 2.34
2728 2919 0.655733 CGGTGTCGAAACAAGCAAGT 59.344 50.000 8.27 0.00 37.08 3.16
2841 3045 3.017581 GTCTCCCCTGCCATGGGT 61.018 66.667 15.13 0.00 45.70 4.51
2842 3046 2.349100 GATGTCTCCCCTGCCATGGG 62.349 65.000 15.13 0.00 46.68 4.00
2843 3047 1.150081 GATGTCTCCCCTGCCATGG 59.850 63.158 7.63 7.63 0.00 3.66
2845 3049 0.622738 ACTGATGTCTCCCCTGCCAT 60.623 55.000 0.00 0.00 0.00 4.40
2846 3050 0.042581 TACTGATGTCTCCCCTGCCA 59.957 55.000 0.00 0.00 0.00 4.92
2847 3051 0.755686 CTACTGATGTCTCCCCTGCC 59.244 60.000 0.00 0.00 0.00 4.85
2850 3098 2.218673 TCCTCTACTGATGTCTCCCCT 58.781 52.381 0.00 0.00 0.00 4.79
2851 3099 2.696187 GTTCCTCTACTGATGTCTCCCC 59.304 54.545 0.00 0.00 0.00 4.81
2864 3112 9.475620 TTCAACTCATATACTTCAGTTCCTCTA 57.524 33.333 0.00 0.00 0.00 2.43
2865 3113 7.962995 TCAACTCATATACTTCAGTTCCTCT 57.037 36.000 0.00 0.00 0.00 3.69
2866 3114 9.436957 TTTTCAACTCATATACTTCAGTTCCTC 57.563 33.333 0.00 0.00 0.00 3.71
2867 3115 9.220767 GTTTTCAACTCATATACTTCAGTTCCT 57.779 33.333 0.00 0.00 0.00 3.36
2937 3223 6.128526 GCTGATAACAGTATATTTTCCCTCGC 60.129 42.308 1.65 0.00 45.04 5.03
3014 3311 9.941325 ATGATTAAATTGGTGTAAAATCTGCAA 57.059 25.926 0.00 0.00 0.00 4.08
3043 3344 5.013183 GGGTGGCTCTATACCATTCACTAAT 59.987 44.000 0.00 0.00 39.95 1.73
3204 3514 2.324330 CCCAACGATCGCTTGCACA 61.324 57.895 16.60 0.00 0.00 4.57
3470 3783 2.811317 CGACTTGTCTGAGGGCGC 60.811 66.667 0.00 0.00 0.00 6.53
3507 3820 2.175069 AGCTGAAGGATGGATCTTGCAT 59.825 45.455 0.00 0.00 0.00 3.96
3536 3849 7.665559 AGCTGGAGATAGTACTCTTTAGATCAG 59.334 40.741 0.00 0.29 37.13 2.90
3550 3863 7.772757 CCAATTCTCTTTTAAGCTGGAGATAGT 59.227 37.037 0.00 0.00 35.22 2.12
3679 3992 7.512130 TCAAAGATATCTGTCAAGCCATATGT 58.488 34.615 5.86 0.00 0.00 2.29
3751 4064 8.783093 CACTGTATCTTGAACATAAGGTTTCAA 58.217 33.333 0.00 0.00 40.63 2.69
3807 4120 7.396055 CCAGGATTTTCCAACTGGTATTTCTTA 59.604 37.037 0.00 0.00 44.21 2.10
3842 4155 5.129485 AGACCATACACTGAGGGAATACTTG 59.871 44.000 0.00 0.00 0.00 3.16
3853 4166 6.777580 TCATAAGCATAGAGACCATACACTGA 59.222 38.462 0.00 0.00 0.00 3.41
3981 4294 3.701205 TCAGCAGCCTTTGAAGTATCA 57.299 42.857 0.00 0.00 0.00 2.15
4116 4429 7.387122 GTCCAATAACCGACTACTTTTCTCTTT 59.613 37.037 0.00 0.00 0.00 2.52
4385 4716 3.682858 GTCTGCAAACGGCTTATAGTGAA 59.317 43.478 0.00 0.00 45.15 3.18
4858 5683 6.155827 AGAAGAAGAGTCTGACAAAATCTCG 58.844 40.000 10.88 0.00 33.05 4.04
5029 5858 8.848474 AGAGTACAACATATGCAAAGTACTTT 57.152 30.769 15.22 15.22 41.36 2.66
5082 6161 9.178758 ACTTCCAATGACTTTAAAAGGCTATAG 57.821 33.333 0.00 0.00 37.45 1.31
5110 6189 6.024049 GCAACACATATAAAGTGAGTTGAGC 58.976 40.000 16.65 3.02 45.11 4.26
5395 6476 0.321346 CCAACCCAATTTGACTGCCC 59.679 55.000 0.00 0.00 0.00 5.36
5410 6491 5.244178 TGAGAAGGAGAAGTAGAAGACCAAC 59.756 44.000 0.00 0.00 0.00 3.77
5527 6608 7.979444 TGAGCTTAAACTTGCAGTATAACTT 57.021 32.000 0.00 0.00 0.00 2.66
5573 6654 4.469657 TCTAAATTGGTGACTGTTGGCTT 58.530 39.130 0.00 0.00 0.00 4.35
5698 6779 4.713814 TCATTGTATTGCTCAGGAGAGTCT 59.286 41.667 0.00 0.00 44.00 3.24
5866 6948 9.573133 GCAAGAAATGTGCTACTATACAAAAAT 57.427 29.630 0.00 0.00 39.00 1.82
5999 7089 7.957484 CCAACAGTTCACTCTAATAATGTTTCG 59.043 37.037 0.00 0.00 0.00 3.46
6059 7151 8.870160 TGTGACAAATCAGGAATTTTAAAGTG 57.130 30.769 0.00 0.00 35.32 3.16
6096 7190 5.941948 AATCTTAAGTTCGTCCTTGGTTG 57.058 39.130 1.63 0.00 0.00 3.77
6192 7296 5.981174 ACAAGCATTCTATTTCCCAATTGG 58.019 37.500 18.21 18.21 0.00 3.16
6215 7460 6.035843 GTCATTCAACACTTCAAGAAGCAAA 58.964 36.000 9.62 0.00 41.99 3.68
6351 7612 6.445475 TGATCATAATTCTCGCTCTCAAGAG 58.555 40.000 2.53 2.53 44.75 2.85
6354 7615 7.170489 GTGATTGATCATAATTCTCGCTCTCAA 59.830 37.037 0.00 0.00 39.30 3.02
6365 7626 8.469309 CCTTGGTAAGGTGATTGATCATAATT 57.531 34.615 0.00 0.00 43.95 1.40
6405 7677 3.971032 AAAGCGAGGCAGTTATATTGC 57.029 42.857 0.00 2.04 40.80 3.56
6589 7866 1.851053 CATTCTGTCGTCTGATGCGAG 59.149 52.381 0.00 0.00 39.14 5.03
6621 7898 3.068560 TGTAGCGCCGTACAATTCTTTT 58.931 40.909 2.29 0.00 29.74 2.27
6642 7919 2.569059 CCATCTTTGTCGAGGCATGAT 58.431 47.619 0.00 0.00 0.00 2.45
6662 7939 0.038801 GCTGCTTGAAGTTTGGGAGC 60.039 55.000 0.00 0.00 36.17 4.70
6880 8157 9.895138 ATTTTCTATTGCAGGCTCATTTTTAAT 57.105 25.926 0.00 0.00 0.00 1.40
6894 8171 5.170021 GCACCATCAACATTTTCTATTGCA 58.830 37.500 0.00 0.00 0.00 4.08
6952 8235 1.872952 CATGTTTGTGAGGTGCTCGAA 59.127 47.619 0.00 0.00 32.35 3.71
6967 8250 1.358787 TGGGCTTCCTGAATCCATGTT 59.641 47.619 2.52 0.00 0.00 2.71
6976 8259 1.492133 CCTTCTGGTGGGCTTCCTGA 61.492 60.000 4.65 4.65 0.00 3.86
7126 8409 6.868339 CACGTATGTCATTCCATGCTTATCTA 59.132 38.462 0.00 0.00 0.00 1.98
7343 8644 3.059597 CACCTTACAAGACAAACAGCTCG 60.060 47.826 0.00 0.00 0.00 5.03
7478 8780 7.445707 CCAGAAAGCTAGAAAAAGTTTAGGAGT 59.554 37.037 0.00 0.00 0.00 3.85
7484 8786 5.360999 AGTGCCAGAAAGCTAGAAAAAGTTT 59.639 36.000 0.00 0.00 0.00 2.66
7514 8816 6.451571 CGATTTTACTTCATGAAAAGCAAGCG 60.452 38.462 9.88 10.65 31.93 4.68
7526 8828 9.450807 CAAGAAAGTTGTTCGATTTTACTTCAT 57.549 29.630 0.00 0.00 0.00 2.57
7635 8937 3.056107 TGTGGAGCTGTATACAAGGTCAC 60.056 47.826 23.55 19.89 0.00 3.67
7652 8954 6.109156 TGTTAAGCAAGAGTAATCTGTGGA 57.891 37.500 0.00 0.00 0.00 4.02
7658 8960 7.062255 GGCAAAACATGTTAAGCAAGAGTAATC 59.938 37.037 26.59 10.24 0.00 1.75
7679 8981 3.254411 TGATGCAAAATGTACTCGGCAAA 59.746 39.130 0.00 0.00 34.64 3.68
7693 8995 5.211174 TGGAATCAACACAATGATGCAAA 57.789 34.783 0.00 0.00 39.90 3.68
7743 9045 5.221521 TGCAAAGTGAGATAGGCCTATACTG 60.222 44.000 25.49 15.02 0.00 2.74
7796 9119 6.712114 ATCTCCCTCTGTCTATTAGCTAGA 57.288 41.667 0.00 0.00 33.95 2.43
7810 9133 1.566703 TCTCGTCCAGAATCTCCCTCT 59.433 52.381 0.00 0.00 0.00 3.69
7864 9187 1.061131 CGTTGTCCGTGATCAATCTGC 59.939 52.381 0.00 0.00 0.00 4.26
7892 9215 8.377425 TCATTGAGTGAATGCATTCGTATGCC 62.377 42.308 29.23 17.01 44.20 4.40
7893 9216 5.504501 TCATTGAGTGAATGCATTCGTATGC 60.505 40.000 29.23 18.94 44.63 3.14
7919 9242 4.288887 ACCCTATCTTTCCTTTCTTTCCGT 59.711 41.667 0.00 0.00 0.00 4.69
7925 9248 3.916989 ACACCACCCTATCTTTCCTTTCT 59.083 43.478 0.00 0.00 0.00 2.52
7937 9260 2.120312 TCTTCACAACACACCACCCTA 58.880 47.619 0.00 0.00 0.00 3.53
7939 9262 1.608590 CATCTTCACAACACACCACCC 59.391 52.381 0.00 0.00 0.00 4.61
7949 9272 6.829811 TGCTTTCATCATATCCATCTTCACAA 59.170 34.615 0.00 0.00 0.00 3.33
7957 9280 7.414873 GCAATCGTATGCTTTCATCATATCCAT 60.415 37.037 7.73 0.00 43.06 3.41
7959 9282 6.253746 GCAATCGTATGCTTTCATCATATCC 58.746 40.000 7.73 0.00 43.06 2.59
7978 9301 0.465460 TAGGCCCATTCCACGCAATC 60.465 55.000 0.00 0.00 0.00 2.67
8043 9366 6.322969 AGGATACACATTGCATGATCAACAAT 59.677 34.615 17.27 17.27 41.41 2.71
8045 9368 5.195185 AGGATACACATTGCATGATCAACA 58.805 37.500 0.00 0.00 41.41 3.33
8070 9393 5.728351 TCACCTTCACTTGAAAACTAACG 57.272 39.130 0.00 0.00 33.07 3.18
8080 9403 2.507484 TCAGCCATTCACCTTCACTTG 58.493 47.619 0.00 0.00 0.00 3.16
8082 9405 2.957402 TTCAGCCATTCACCTTCACT 57.043 45.000 0.00 0.00 0.00 3.41
8098 9421 2.290896 CCCAGGGATAGTTGCACTTTCA 60.291 50.000 0.00 0.00 29.36 2.69
8099 9422 2.290960 ACCCAGGGATAGTTGCACTTTC 60.291 50.000 14.54 0.00 0.00 2.62
8100 9423 1.710809 ACCCAGGGATAGTTGCACTTT 59.289 47.619 14.54 0.00 0.00 2.66
8101 9424 1.004745 CACCCAGGGATAGTTGCACTT 59.995 52.381 14.54 0.00 0.00 3.16
8102 9425 0.620556 CACCCAGGGATAGTTGCACT 59.379 55.000 14.54 0.00 0.00 4.40
8103 9426 0.394352 CCACCCAGGGATAGTTGCAC 60.394 60.000 14.54 0.00 0.00 4.57
8104 9427 0.844661 ACCACCCAGGGATAGTTGCA 60.845 55.000 14.54 0.00 43.89 4.08
8105 9428 0.331616 AACCACCCAGGGATAGTTGC 59.668 55.000 14.54 0.00 43.89 4.17
8106 9429 2.825532 CAAAACCACCCAGGGATAGTTG 59.174 50.000 14.54 5.92 43.89 3.16
8107 9430 2.719705 TCAAAACCACCCAGGGATAGTT 59.280 45.455 14.54 9.61 43.89 2.24
8108 9431 2.354328 TCAAAACCACCCAGGGATAGT 58.646 47.619 14.54 2.88 43.89 2.12


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.