Multiple sequence alignment - TraesCS5D01G226200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G226200 chr5D 100.000 3884 0 0 1 3884 334323996 334320113 0.000000e+00 7173.0
1 TraesCS5D01G226200 chr5D 88.406 552 39 5 1 528 73806768 73806218 3.270000e-180 641.0
2 TraesCS5D01G226200 chr5B 92.566 1668 82 19 824 2459 391399009 391397352 0.000000e+00 2355.0
3 TraesCS5D01G226200 chr5B 93.506 539 24 2 1 528 496958154 496958692 0.000000e+00 791.0
4 TraesCS5D01G226200 chr5B 86.325 585 56 10 2654 3220 391397036 391396458 1.980000e-172 616.0
5 TraesCS5D01G226200 chr5B 86.481 540 60 3 1 528 420564156 420563618 7.230000e-162 580.0
6 TraesCS5D01G226200 chr5B 92.958 213 9 3 2460 2666 391397269 391397057 4.880000e-79 305.0
7 TraesCS5D01G226200 chr5B 88.596 228 19 4 3658 3882 391396396 391396173 1.780000e-68 270.0
8 TraesCS5D01G226200 chr5B 75.355 211 37 12 331 528 482254345 482254553 1.920000e-13 87.9
9 TraesCS5D01G226200 chr5A 90.127 1104 66 18 2152 3221 436111570 436110476 0.000000e+00 1395.0
10 TraesCS5D01G226200 chr5A 95.869 823 34 0 1348 2170 436112570 436111748 0.000000e+00 1332.0
11 TraesCS5D01G226200 chr5A 93.884 327 12 6 3562 3884 436110481 436110159 1.620000e-133 486.0
12 TraesCS5D01G226200 chr5A 94.118 170 7 1 538 704 436113269 436113100 4.980000e-64 255.0
13 TraesCS5D01G226200 chr5A 95.570 158 7 0 824 981 436113094 436112937 1.790000e-63 254.0
14 TraesCS5D01G226200 chr5A 97.727 44 0 1 3519 3562 436620621 436620663 1.500000e-09 75.0
15 TraesCS5D01G226200 chr4B 92.007 538 31 3 1 528 630314797 630315332 0.000000e+00 745.0
16 TraesCS5D01G226200 chr4B 94.864 331 9 2 3234 3556 347377505 347377835 9.630000e-141 510.0
17 TraesCS5D01G226200 chr1D 90.744 551 28 3 1 528 415278108 415278658 0.000000e+00 713.0
18 TraesCS5D01G226200 chr2B 88.160 549 37 3 1 527 522821996 522822538 2.550000e-176 628.0
19 TraesCS5D01G226200 chr7D 87.726 554 40 4 1 527 469223952 469224504 4.260000e-174 621.0
20 TraesCS5D01G226200 chr1B 86.137 541 63 5 1 529 308590065 308589525 1.210000e-159 573.0
21 TraesCS5D01G226200 chr1B 95.690 348 8 4 3222 3562 280699798 280699451 1.580000e-153 553.0
22 TraesCS5D01G226200 chr1B 95.266 338 8 4 3222 3551 270319622 270319959 2.660000e-146 529.0
23 TraesCS5D01G226200 chr3D 95.166 331 11 4 3222 3550 68165182 68164855 5.750000e-143 518.0
24 TraesCS5D01G226200 chr1A 94.925 335 9 2 3234 3560 543930379 543930713 5.750000e-143 518.0
25 TraesCS5D01G226200 chr1A 89.916 119 12 0 704 822 168567513 168567631 1.870000e-33 154.0
26 TraesCS5D01G226200 chr6B 94.627 335 10 2 3234 3560 463375476 463375142 2.680000e-141 512.0
27 TraesCS5D01G226200 chr6B 94.118 323 11 5 3222 3536 13966800 13966478 5.830000e-133 484.0
28 TraesCS5D01G226200 chr6B 86.957 69 5 4 462 528 497267414 497267480 1.500000e-09 75.0
29 TraesCS5D01G226200 chr4A 94.362 337 11 2 3234 3562 306318691 306319027 9.630000e-141 510.0
30 TraesCS5D01G226200 chr4A 88.000 425 50 1 3 427 731652850 731653273 5.790000e-138 501.0
31 TraesCS5D01G226200 chr4A 86.822 129 14 2 696 822 729078306 729078433 1.450000e-29 141.0
32 TraesCS5D01G226200 chr7B 93.623 345 14 3 3222 3558 292831875 292831531 3.460000e-140 508.0
33 TraesCS5D01G226200 chr7B 91.379 116 9 1 707 822 117788513 117788627 1.440000e-34 158.0
34 TraesCS5D01G226200 chr7B 89.655 116 12 0 707 822 744645533 744645418 8.690000e-32 148.0
35 TraesCS5D01G226200 chr4D 91.667 120 10 0 706 825 367720660 367720541 2.400000e-37 167.0
36 TraesCS5D01G226200 chr4D 90.517 116 11 0 707 822 503358032 503357917 1.870000e-33 154.0
37 TraesCS5D01G226200 chr4D 89.076 119 13 0 707 825 54482110 54481992 8.690000e-32 148.0
38 TraesCS5D01G226200 chr6A 90.517 116 11 0 707 822 147303660 147303775 1.870000e-33 154.0
39 TraesCS5D01G226200 chr3B 90.517 116 10 1 707 822 223036216 223036330 6.720000e-33 152.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G226200 chr5D 334320113 334323996 3883 True 7173.0 7173 100.00000 1 3884 1 chr5D.!!$R2 3883
1 TraesCS5D01G226200 chr5D 73806218 73806768 550 True 641.0 641 88.40600 1 528 1 chr5D.!!$R1 527
2 TraesCS5D01G226200 chr5B 391396173 391399009 2836 True 886.5 2355 90.11125 824 3882 4 chr5B.!!$R2 3058
3 TraesCS5D01G226200 chr5B 496958154 496958692 538 False 791.0 791 93.50600 1 528 1 chr5B.!!$F2 527
4 TraesCS5D01G226200 chr5B 420563618 420564156 538 True 580.0 580 86.48100 1 528 1 chr5B.!!$R1 527
5 TraesCS5D01G226200 chr5A 436110159 436113269 3110 True 744.4 1395 93.91360 538 3884 5 chr5A.!!$R1 3346
6 TraesCS5D01G226200 chr4B 630314797 630315332 535 False 745.0 745 92.00700 1 528 1 chr4B.!!$F2 527
7 TraesCS5D01G226200 chr1D 415278108 415278658 550 False 713.0 713 90.74400 1 528 1 chr1D.!!$F1 527
8 TraesCS5D01G226200 chr2B 522821996 522822538 542 False 628.0 628 88.16000 1 527 1 chr2B.!!$F1 526
9 TraesCS5D01G226200 chr7D 469223952 469224504 552 False 621.0 621 87.72600 1 527 1 chr7D.!!$F1 526
10 TraesCS5D01G226200 chr1B 308589525 308590065 540 True 573.0 573 86.13700 1 529 1 chr1B.!!$R2 528

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
695 732 0.179132 TAGCAAAGCGTCGCCGATTA 60.179 50.0 14.86 0.0 42.75 1.75 F
722 759 0.261402 TAATACCCCCTCCGTCCGAA 59.739 55.0 0.00 0.0 0.00 4.30 F
991 1030 0.545548 AACTCCCCACTCCTCACTCC 60.546 60.0 0.00 0.0 0.00 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1794 1833 0.244721 GCATCAGCCCCTTGAACAAC 59.755 55.000 0.00 0.0 33.58 3.32 R
1965 2004 1.220206 CATCGGCAGCCTCTTCACT 59.780 57.895 10.54 0.0 0.00 3.41 R
2947 3357 1.000394 TCAAAGGCAGACGAACATCGA 60.000 47.619 6.78 0.0 43.74 3.59 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 2.101582 AGACAAGTGTCCACTCTGTGAC 59.898 50.000 15.22 6.16 45.85 3.67
203 206 3.840831 TCCAAGAAGGATCTGCACG 57.159 52.632 0.00 0.00 43.07 5.34
270 273 0.887933 GTCGTGTTTGATGGGGCAAT 59.112 50.000 0.00 0.00 0.00 3.56
412 419 4.106019 GGGGAGGAGTAGACTATGTTAGGA 59.894 50.000 0.00 0.00 0.00 2.94
497 531 7.834068 TCGCCTTTCTTCTATCAATATATGC 57.166 36.000 0.00 0.00 0.00 3.14
508 542 9.948964 TTCTATCAATATATGCTATGCACACTT 57.051 29.630 0.00 0.00 43.04 3.16
558 592 7.283329 AGTGAACTTTGAGGATAGTTTCAACT 58.717 34.615 0.00 0.00 42.91 3.16
623 657 3.650409 CGAGATTCAACCTCCCTCG 57.350 57.895 0.00 0.00 40.28 4.63
627 661 2.432510 GAGATTCAACCTCCCTCGACAT 59.567 50.000 0.00 0.00 0.00 3.06
671 708 9.675464 CCTATATACAAAAACTAGGTTGTCCAA 57.325 33.333 10.81 1.73 38.80 3.53
695 732 0.179132 TAGCAAAGCGTCGCCGATTA 60.179 50.000 14.86 0.00 42.75 1.75
701 738 1.661821 GCGTCGCCGATTAGCATCT 60.662 57.895 5.75 0.00 35.63 2.90
704 741 2.477357 GCGTCGCCGATTAGCATCTATA 60.477 50.000 5.75 0.00 35.63 1.31
705 742 3.754955 CGTCGCCGATTAGCATCTATAA 58.245 45.455 0.00 0.00 35.63 0.98
706 743 4.352039 CGTCGCCGATTAGCATCTATAAT 58.648 43.478 0.00 0.00 35.63 1.28
707 744 5.507974 CGTCGCCGATTAGCATCTATAATA 58.492 41.667 0.00 0.00 35.63 0.98
708 745 5.395778 CGTCGCCGATTAGCATCTATAATAC 59.604 44.000 0.00 0.00 35.63 1.89
709 746 5.686397 GTCGCCGATTAGCATCTATAATACC 59.314 44.000 0.00 0.00 0.00 2.73
710 747 4.982916 CGCCGATTAGCATCTATAATACCC 59.017 45.833 0.00 0.00 0.00 3.69
711 748 5.298347 GCCGATTAGCATCTATAATACCCC 58.702 45.833 0.00 0.00 0.00 4.95
712 749 5.742255 GCCGATTAGCATCTATAATACCCCC 60.742 48.000 0.00 0.00 0.00 5.40
713 750 5.602978 CCGATTAGCATCTATAATACCCCCT 59.397 44.000 0.00 0.00 0.00 4.79
714 751 6.239345 CCGATTAGCATCTATAATACCCCCTC 60.239 46.154 0.00 0.00 0.00 4.30
715 752 6.239345 CGATTAGCATCTATAATACCCCCTCC 60.239 46.154 0.00 0.00 0.00 4.30
716 753 3.375699 AGCATCTATAATACCCCCTCCG 58.624 50.000 0.00 0.00 0.00 4.63
717 754 3.105283 GCATCTATAATACCCCCTCCGT 58.895 50.000 0.00 0.00 0.00 4.69
718 755 3.132467 GCATCTATAATACCCCCTCCGTC 59.868 52.174 0.00 0.00 0.00 4.79
719 756 3.463048 TCTATAATACCCCCTCCGTCC 57.537 52.381 0.00 0.00 0.00 4.79
720 757 2.097825 CTATAATACCCCCTCCGTCCG 58.902 57.143 0.00 0.00 0.00 4.79
721 758 0.484212 ATAATACCCCCTCCGTCCGA 59.516 55.000 0.00 0.00 0.00 4.55
722 759 0.261402 TAATACCCCCTCCGTCCGAA 59.739 55.000 0.00 0.00 0.00 4.30
723 760 0.618393 AATACCCCCTCCGTCCGAAA 60.618 55.000 0.00 0.00 0.00 3.46
724 761 0.618393 ATACCCCCTCCGTCCGAAAA 60.618 55.000 0.00 0.00 0.00 2.29
725 762 0.835543 TACCCCCTCCGTCCGAAAAA 60.836 55.000 0.00 0.00 0.00 1.94
746 783 7.454260 AAAAACTTGTCTCAAGTTTGTCTCT 57.546 32.000 28.77 16.90 46.33 3.10
747 784 7.454260 AAAACTTGTCTCAAGTTTGTCTCTT 57.546 32.000 28.77 16.39 46.33 2.85
748 785 8.561738 AAAACTTGTCTCAAGTTTGTCTCTTA 57.438 30.769 28.77 0.00 46.33 2.10
749 786 8.561738 AAACTTGTCTCAAGTTTGTCTCTTAA 57.438 30.769 28.03 0.00 45.58 1.85
750 787 8.561738 AACTTGTCTCAAGTTTGTCTCTTAAA 57.438 30.769 18.26 0.00 37.18 1.52
751 788 8.738645 ACTTGTCTCAAGTTTGTCTCTTAAAT 57.261 30.769 9.00 0.00 0.00 1.40
752 789 9.832445 ACTTGTCTCAAGTTTGTCTCTTAAATA 57.168 29.630 9.00 0.00 0.00 1.40
766 803 8.237949 TGTCTCTTAAATAGATGTATCTAGCGC 58.762 37.037 0.00 0.00 42.20 5.92
767 804 8.455682 GTCTCTTAAATAGATGTATCTAGCGCT 58.544 37.037 17.26 17.26 42.20 5.92
768 805 9.668497 TCTCTTAAATAGATGTATCTAGCGCTA 57.332 33.333 17.75 17.75 42.20 4.26
773 810 8.749841 AAATAGATGTATCTAGCGCTAACTTG 57.250 34.615 19.37 6.84 42.20 3.16
774 811 7.689446 ATAGATGTATCTAGCGCTAACTTGA 57.311 36.000 19.37 12.43 42.20 3.02
775 812 6.582677 AGATGTATCTAGCGCTAACTTGAT 57.417 37.500 19.37 18.40 36.37 2.57
776 813 6.385843 AGATGTATCTAGCGCTAACTTGATG 58.614 40.000 19.37 4.88 34.60 3.07
777 814 4.299155 TGTATCTAGCGCTAACTTGATGC 58.701 43.478 19.37 19.15 35.94 3.91
778 815 3.742433 ATCTAGCGCTAACTTGATGCT 57.258 42.857 19.37 0.00 39.59 3.79
779 816 4.855715 ATCTAGCGCTAACTTGATGCTA 57.144 40.909 19.37 0.00 37.12 3.49
782 819 3.742433 AGCGCTAACTTGATGCTAGAT 57.258 42.857 8.99 0.00 33.37 1.98
783 820 4.855715 AGCGCTAACTTGATGCTAGATA 57.144 40.909 8.99 0.00 33.37 1.98
784 821 4.551388 AGCGCTAACTTGATGCTAGATAC 58.449 43.478 8.99 0.00 33.37 2.24
785 822 4.038042 AGCGCTAACTTGATGCTAGATACA 59.962 41.667 8.99 0.00 33.37 2.29
786 823 4.926238 GCGCTAACTTGATGCTAGATACAT 59.074 41.667 0.00 0.00 0.00 2.29
787 824 5.406780 GCGCTAACTTGATGCTAGATACATT 59.593 40.000 0.00 0.00 0.00 2.71
788 825 6.400515 GCGCTAACTTGATGCTAGATACATTC 60.401 42.308 0.00 0.00 0.00 2.67
789 826 6.642540 CGCTAACTTGATGCTAGATACATTCA 59.357 38.462 0.00 0.00 0.00 2.57
790 827 7.330454 CGCTAACTTGATGCTAGATACATTCAT 59.670 37.037 0.00 0.00 0.00 2.57
791 828 8.655092 GCTAACTTGATGCTAGATACATTCATC 58.345 37.037 0.00 0.00 35.40 2.92
792 829 9.926158 CTAACTTGATGCTAGATACATTCATCT 57.074 33.333 0.00 0.00 38.76 2.90
793 830 8.604640 AACTTGATGCTAGATACATTCATCTG 57.395 34.615 0.00 0.00 35.99 2.90
794 831 7.960262 ACTTGATGCTAGATACATTCATCTGA 58.040 34.615 0.00 0.00 35.99 3.27
795 832 8.089597 ACTTGATGCTAGATACATTCATCTGAG 58.910 37.037 0.00 1.33 35.99 3.35
796 833 6.932947 TGATGCTAGATACATTCATCTGAGG 58.067 40.000 0.00 0.00 35.99 3.86
797 834 5.735285 TGCTAGATACATTCATCTGAGGG 57.265 43.478 0.00 0.00 35.99 4.30
798 835 5.397360 TGCTAGATACATTCATCTGAGGGA 58.603 41.667 0.00 0.00 35.99 4.20
799 836 5.244851 TGCTAGATACATTCATCTGAGGGAC 59.755 44.000 0.00 0.00 35.99 4.46
800 837 5.244851 GCTAGATACATTCATCTGAGGGACA 59.755 44.000 0.00 0.00 35.99 4.02
801 838 6.239430 GCTAGATACATTCATCTGAGGGACAA 60.239 42.308 0.00 0.00 35.99 3.18
802 839 6.172136 AGATACATTCATCTGAGGGACAAG 57.828 41.667 0.00 0.00 33.93 3.16
803 840 2.996631 ACATTCATCTGAGGGACAAGC 58.003 47.619 0.00 0.00 0.00 4.01
804 841 2.575279 ACATTCATCTGAGGGACAAGCT 59.425 45.455 0.00 0.00 0.00 3.74
805 842 3.009916 ACATTCATCTGAGGGACAAGCTT 59.990 43.478 0.00 0.00 0.00 3.74
806 843 3.795688 TTCATCTGAGGGACAAGCTTT 57.204 42.857 0.00 0.00 0.00 3.51
807 844 3.795688 TCATCTGAGGGACAAGCTTTT 57.204 42.857 0.00 0.00 0.00 2.27
808 845 4.104383 TCATCTGAGGGACAAGCTTTTT 57.896 40.909 0.00 0.00 0.00 1.94
809 846 4.074970 TCATCTGAGGGACAAGCTTTTTC 58.925 43.478 0.00 0.00 0.00 2.29
810 847 3.576078 TCTGAGGGACAAGCTTTTTCA 57.424 42.857 0.00 0.00 0.00 2.69
811 848 3.480470 TCTGAGGGACAAGCTTTTTCAG 58.520 45.455 0.00 1.10 33.63 3.02
812 849 3.136443 TCTGAGGGACAAGCTTTTTCAGA 59.864 43.478 10.17 10.17 37.74 3.27
813 850 3.214328 TGAGGGACAAGCTTTTTCAGAC 58.786 45.455 0.00 0.00 0.00 3.51
814 851 2.222027 AGGGACAAGCTTTTTCAGACG 58.778 47.619 0.00 0.00 0.00 4.18
815 852 1.266989 GGGACAAGCTTTTTCAGACGG 59.733 52.381 0.00 0.00 0.00 4.79
816 853 2.218603 GGACAAGCTTTTTCAGACGGA 58.781 47.619 0.00 0.00 0.00 4.69
817 854 2.224314 GGACAAGCTTTTTCAGACGGAG 59.776 50.000 0.00 0.00 0.00 4.63
818 855 2.222027 ACAAGCTTTTTCAGACGGAGG 58.778 47.619 0.00 0.00 0.00 4.30
819 856 1.537202 CAAGCTTTTTCAGACGGAGGG 59.463 52.381 0.00 0.00 0.00 4.30
820 857 1.056660 AGCTTTTTCAGACGGAGGGA 58.943 50.000 0.00 0.00 0.00 4.20
821 858 1.002544 AGCTTTTTCAGACGGAGGGAG 59.997 52.381 0.00 0.00 0.00 4.30
822 859 1.443802 CTTTTTCAGACGGAGGGAGC 58.556 55.000 0.00 0.00 0.00 4.70
857 894 3.120060 GCTTTGCTGTCTATGTGAAGTGG 60.120 47.826 0.00 0.00 0.00 4.00
985 1024 2.204151 CCCCAACTCCCCACTCCT 60.204 66.667 0.00 0.00 0.00 3.69
986 1025 2.301738 CCCCAACTCCCCACTCCTC 61.302 68.421 0.00 0.00 0.00 3.71
987 1026 1.538876 CCCAACTCCCCACTCCTCA 60.539 63.158 0.00 0.00 0.00 3.86
988 1027 1.679898 CCAACTCCCCACTCCTCAC 59.320 63.158 0.00 0.00 0.00 3.51
989 1028 0.838122 CCAACTCCCCACTCCTCACT 60.838 60.000 0.00 0.00 0.00 3.41
990 1029 0.610687 CAACTCCCCACTCCTCACTC 59.389 60.000 0.00 0.00 0.00 3.51
991 1030 0.545548 AACTCCCCACTCCTCACTCC 60.546 60.000 0.00 0.00 0.00 3.85
1086 1125 3.404141 GAGGCCGCTCTCTGTCGTC 62.404 68.421 0.00 0.00 0.00 4.20
1146 1185 2.895865 CTCCTCGCGCTCGTCCTA 60.896 66.667 5.56 0.00 36.96 2.94
1149 1188 4.592936 CTCGCGCTCGTCCTACCG 62.593 72.222 5.56 0.00 36.96 4.02
1154 1193 3.755628 GCTCGTCCTACCGCACCA 61.756 66.667 0.00 0.00 0.00 4.17
1161 1200 2.722201 CCTACCGCACCACCTCTCC 61.722 68.421 0.00 0.00 0.00 3.71
1236 1275 2.581354 CTCCTCAAGCTCCACCCG 59.419 66.667 0.00 0.00 0.00 5.28
1538 1577 2.114411 GTTCCAGGAAACGGCCCA 59.886 61.111 2.45 0.00 0.00 5.36
1568 1607 1.071814 ACTCCTTTTACGCGGCCAA 59.928 52.632 12.47 0.00 0.00 4.52
1703 1742 2.740055 GGCCGTGCAGAGTGTCAG 60.740 66.667 0.00 0.00 0.00 3.51
1940 1979 5.106157 CCATGAACCATAGTTTTGACCTGAC 60.106 44.000 0.00 0.00 35.94 3.51
1965 2004 1.077828 TGGAGGAGCTCTTCAGAGGAA 59.922 52.381 25.32 2.92 42.29 3.36
2139 2178 7.871853 GTGTCTACACATGTTTACCATTTTCT 58.128 34.615 8.35 0.00 45.75 2.52
2172 2437 3.541996 ATGCGTTGTAGTCATGGATGA 57.458 42.857 0.00 0.00 0.00 2.92
2176 2441 4.081917 TGCGTTGTAGTCATGGATGAACTA 60.082 41.667 0.00 0.00 38.75 2.24
2183 2448 5.745312 AGTCATGGATGAACTAGTTGTCA 57.255 39.130 14.14 6.26 38.75 3.58
2209 2481 8.792830 TTTTTGTTAGCTTAGTAGATGCAGAT 57.207 30.769 0.00 0.00 0.00 2.90
2225 2499 5.205759 TGCAGATGTACAGATAGTCATGG 57.794 43.478 0.33 0.00 0.00 3.66
2268 2542 7.652727 TGTAGATCACTATTACTCTGCATCAC 58.347 38.462 0.00 0.00 0.00 3.06
2276 2551 7.708322 CACTATTACTCTGCATCACTGTTACAT 59.292 37.037 0.00 0.00 0.00 2.29
2284 2559 5.178061 TGCATCACTGTTACATAGAGTTGG 58.822 41.667 0.00 0.00 0.00 3.77
2564 2937 8.425237 AGAGCTCCCCTTATAAGTTATAACTC 57.575 38.462 18.28 13.15 38.57 3.01
2603 2976 8.530804 TGTAGTCTCCCCTTATAACTAAAGAC 57.469 38.462 0.00 0.00 33.71 3.01
2680 3089 5.107722 GGTTTGCAACGTTCTACTGTACTAC 60.108 44.000 0.00 0.00 0.00 2.73
2681 3090 5.443185 TTGCAACGTTCTACTGTACTACT 57.557 39.130 0.00 0.00 0.00 2.57
2682 3091 6.558771 TTGCAACGTTCTACTGTACTACTA 57.441 37.500 0.00 0.00 0.00 1.82
2686 3095 8.340443 TGCAACGTTCTACTGTACTACTATATG 58.660 37.037 0.00 0.00 0.00 1.78
2714 3123 7.642082 AAGAAGCAAGCTGAGATTATGATTT 57.358 32.000 0.00 0.00 0.00 2.17
2723 3132 8.358582 AGCTGAGATTATGATTTGTTTTTCCT 57.641 30.769 0.00 0.00 0.00 3.36
2725 3134 8.866956 GCTGAGATTATGATTTGTTTTTCCTTG 58.133 33.333 0.00 0.00 0.00 3.61
2815 3225 0.461870 AACAACTGCGACAGAGCACA 60.462 50.000 12.77 0.00 42.92 4.57
2847 3257 1.595382 GGACCAATCATCCGGCGAG 60.595 63.158 9.30 0.00 0.00 5.03
2852 3262 0.179100 CAATCATCCGGCGAGTCAGT 60.179 55.000 9.30 0.00 0.00 3.41
2936 3346 0.671781 GCCTCGCGAGCATCCATATT 60.672 55.000 30.49 0.00 0.00 1.28
2937 3347 1.073964 CCTCGCGAGCATCCATATTG 58.926 55.000 30.49 8.92 0.00 1.90
2938 3348 1.606480 CCTCGCGAGCATCCATATTGT 60.606 52.381 30.49 0.00 0.00 2.71
2939 3349 2.138320 CTCGCGAGCATCCATATTGTT 58.862 47.619 25.07 0.00 0.00 2.83
2940 3350 2.135139 TCGCGAGCATCCATATTGTTC 58.865 47.619 3.71 0.00 0.00 3.18
2946 3356 3.470709 AGCATCCATATTGTTCGACCAG 58.529 45.455 0.00 0.00 0.00 4.00
2947 3357 3.118261 AGCATCCATATTGTTCGACCAGT 60.118 43.478 0.00 0.00 0.00 4.00
2965 3375 1.000955 AGTCGATGTTCGTCTGCCTTT 59.999 47.619 0.00 0.00 41.35 3.11
3087 3511 0.036306 AAACTTCACCTGTAGGGCCG 59.964 55.000 0.00 0.00 40.27 6.13
3117 3541 1.998315 CTCTTTCAGGTGATGCTGTCG 59.002 52.381 0.00 0.00 0.00 4.35
3127 3551 3.181510 GGTGATGCTGTCGAAATGTAACC 60.182 47.826 0.00 0.00 0.00 2.85
3156 3588 0.991920 TTTGCCTCAGGGAAGTAGGG 59.008 55.000 0.00 0.00 33.87 3.53
3167 3599 5.659971 TCAGGGAAGTAGGGTATTCTGTAAC 59.340 44.000 0.00 0.00 0.00 2.50
3172 3604 5.121380 AGTAGGGTATTCTGTAACGAGGA 57.879 43.478 0.00 0.00 0.00 3.71
3201 3634 6.509677 GCTCGCATAACCTGATTTAGTGTAAC 60.510 42.308 0.00 0.00 0.00 2.50
3229 3662 8.408043 TTTTTGTTGTCATGGATCTATGTCTT 57.592 30.769 17.55 0.00 0.00 3.01
3230 3663 7.615582 TTTGTTGTCATGGATCTATGTCTTC 57.384 36.000 17.55 10.28 0.00 2.87
3231 3664 6.550938 TGTTGTCATGGATCTATGTCTTCT 57.449 37.500 17.55 0.00 0.00 2.85
3232 3665 7.660030 TGTTGTCATGGATCTATGTCTTCTA 57.340 36.000 17.55 0.00 0.00 2.10
3233 3666 7.720442 TGTTGTCATGGATCTATGTCTTCTAG 58.280 38.462 17.55 0.00 0.00 2.43
3234 3667 6.907853 TGTCATGGATCTATGTCTTCTAGG 57.092 41.667 17.55 0.00 0.00 3.02
3235 3668 5.244851 TGTCATGGATCTATGTCTTCTAGGC 59.755 44.000 17.55 0.00 0.00 3.93
3236 3669 5.244851 GTCATGGATCTATGTCTTCTAGGCA 59.755 44.000 17.55 0.00 32.55 4.75
3237 3670 6.021672 TCATGGATCTATGTCTTCTAGGCAT 58.978 40.000 17.55 0.00 43.89 4.40
3238 3671 7.123397 GTCATGGATCTATGTCTTCTAGGCATA 59.877 40.741 17.55 1.51 39.06 3.14
3250 3683 2.203209 GGCATAGCCGGTCCCAAG 60.203 66.667 1.90 0.00 39.62 3.61
3251 3684 2.902343 GCATAGCCGGTCCCAAGC 60.902 66.667 1.90 0.00 0.00 4.01
3252 3685 2.203209 CATAGCCGGTCCCAAGCC 60.203 66.667 1.90 0.00 0.00 4.35
3253 3686 3.489513 ATAGCCGGTCCCAAGCCC 61.490 66.667 1.90 0.00 0.00 5.19
3262 3695 2.044352 CCCAAGCCCGGGTAAAGG 60.044 66.667 24.63 18.41 41.83 3.11
3263 3696 2.608550 CCCAAGCCCGGGTAAAGGA 61.609 63.158 24.63 0.00 41.83 3.36
3264 3697 1.077716 CCAAGCCCGGGTAAAGGAG 60.078 63.158 24.63 5.31 0.00 3.69
3265 3698 1.077716 CAAGCCCGGGTAAAGGAGG 60.078 63.158 24.63 0.00 0.00 4.30
3266 3699 1.229723 AAGCCCGGGTAAAGGAGGA 60.230 57.895 24.63 0.00 0.00 3.71
3267 3700 1.272554 AAGCCCGGGTAAAGGAGGAG 61.273 60.000 24.63 0.00 0.00 3.69
3268 3701 2.743179 GCCCGGGTAAAGGAGGAGG 61.743 68.421 24.63 0.00 0.00 4.30
3269 3702 2.070650 CCCGGGTAAAGGAGGAGGG 61.071 68.421 14.18 0.00 0.00 4.30
3270 3703 1.306739 CCGGGTAAAGGAGGAGGGT 60.307 63.158 0.00 0.00 0.00 4.34
3271 3704 0.912968 CCGGGTAAAGGAGGAGGGTT 60.913 60.000 0.00 0.00 0.00 4.11
3272 3705 0.252197 CGGGTAAAGGAGGAGGGTTG 59.748 60.000 0.00 0.00 0.00 3.77
3273 3706 1.369403 GGGTAAAGGAGGAGGGTTGT 58.631 55.000 0.00 0.00 0.00 3.32
3274 3707 1.004394 GGGTAAAGGAGGAGGGTTGTG 59.996 57.143 0.00 0.00 0.00 3.33
3275 3708 1.982958 GGTAAAGGAGGAGGGTTGTGA 59.017 52.381 0.00 0.00 0.00 3.58
3276 3709 2.576648 GGTAAAGGAGGAGGGTTGTGAT 59.423 50.000 0.00 0.00 0.00 3.06
3277 3710 3.778629 GGTAAAGGAGGAGGGTTGTGATA 59.221 47.826 0.00 0.00 0.00 2.15
3278 3711 4.141688 GGTAAAGGAGGAGGGTTGTGATAG 60.142 50.000 0.00 0.00 0.00 2.08
3279 3712 2.182516 AGGAGGAGGGTTGTGATAGG 57.817 55.000 0.00 0.00 0.00 2.57
3280 3713 0.470341 GGAGGAGGGTTGTGATAGGC 59.530 60.000 0.00 0.00 0.00 3.93
3281 3714 1.501582 GAGGAGGGTTGTGATAGGCT 58.498 55.000 0.00 0.00 0.00 4.58
3282 3715 1.840635 GAGGAGGGTTGTGATAGGCTT 59.159 52.381 0.00 0.00 0.00 4.35
3283 3716 1.561542 AGGAGGGTTGTGATAGGCTTG 59.438 52.381 0.00 0.00 0.00 4.01
3284 3717 1.408822 GGAGGGTTGTGATAGGCTTGG 60.409 57.143 0.00 0.00 0.00 3.61
3285 3718 0.034089 AGGGTTGTGATAGGCTTGGC 60.034 55.000 0.00 0.00 0.00 4.52
3286 3719 1.376609 GGGTTGTGATAGGCTTGGCG 61.377 60.000 0.00 0.00 0.00 5.69
3287 3720 0.392461 GGTTGTGATAGGCTTGGCGA 60.392 55.000 0.00 0.00 0.00 5.54
3288 3721 1.009829 GTTGTGATAGGCTTGGCGAG 58.990 55.000 0.00 0.00 0.00 5.03
3299 3732 4.458666 TGGCGAGCCAACGTAAAA 57.541 50.000 15.24 0.00 44.12 1.52
3300 3733 2.704108 TGGCGAGCCAACGTAAAAA 58.296 47.368 15.24 0.00 44.12 1.94
3301 3734 0.308376 TGGCGAGCCAACGTAAAAAC 59.692 50.000 15.24 0.00 44.12 2.43
3302 3735 0.589708 GGCGAGCCAACGTAAAAACT 59.410 50.000 9.58 0.00 35.81 2.66
3303 3736 1.799994 GGCGAGCCAACGTAAAAACTA 59.200 47.619 9.58 0.00 35.81 2.24
3304 3737 2.159747 GGCGAGCCAACGTAAAAACTAG 60.160 50.000 9.58 0.00 35.81 2.57
3305 3738 2.723923 GCGAGCCAACGTAAAAACTAGC 60.724 50.000 0.00 0.00 35.59 3.42
3306 3739 2.159747 CGAGCCAACGTAAAAACTAGCC 60.160 50.000 0.00 0.00 0.00 3.93
3307 3740 2.809696 GAGCCAACGTAAAAACTAGCCA 59.190 45.455 0.00 0.00 0.00 4.75
3308 3741 2.812011 AGCCAACGTAAAAACTAGCCAG 59.188 45.455 0.00 0.00 0.00 4.85
3309 3742 2.551032 GCCAACGTAAAAACTAGCCAGT 59.449 45.455 0.00 0.00 36.19 4.00
3310 3743 3.364664 GCCAACGTAAAAACTAGCCAGTC 60.365 47.826 0.00 0.00 32.29 3.51
3311 3744 3.187842 CCAACGTAAAAACTAGCCAGTCC 59.812 47.826 0.00 0.00 32.29 3.85
3312 3745 3.049708 ACGTAAAAACTAGCCAGTCCC 57.950 47.619 0.00 0.00 32.29 4.46
3313 3746 2.369532 ACGTAAAAACTAGCCAGTCCCA 59.630 45.455 0.00 0.00 32.29 4.37
3314 3747 3.008704 ACGTAAAAACTAGCCAGTCCCAT 59.991 43.478 0.00 0.00 32.29 4.00
3315 3748 4.223477 ACGTAAAAACTAGCCAGTCCCATA 59.777 41.667 0.00 0.00 32.29 2.74
3316 3749 4.809426 CGTAAAAACTAGCCAGTCCCATAG 59.191 45.833 0.00 0.00 32.29 2.23
3317 3750 3.933861 AAAACTAGCCAGTCCCATAGG 57.066 47.619 0.00 0.00 32.29 2.57
3318 3751 2.570386 AACTAGCCAGTCCCATAGGT 57.430 50.000 0.00 0.00 32.29 3.08
3319 3752 3.700863 AACTAGCCAGTCCCATAGGTA 57.299 47.619 0.00 0.00 32.29 3.08
3320 3753 3.925261 ACTAGCCAGTCCCATAGGTAT 57.075 47.619 0.00 0.00 0.00 2.73
3321 3754 3.511477 ACTAGCCAGTCCCATAGGTATG 58.489 50.000 0.00 0.00 0.00 2.39
3322 3755 2.795291 AGCCAGTCCCATAGGTATGA 57.205 50.000 0.00 0.00 35.75 2.15
3323 3756 3.060479 AGCCAGTCCCATAGGTATGAA 57.940 47.619 0.00 0.00 35.75 2.57
3324 3757 3.393687 AGCCAGTCCCATAGGTATGAAA 58.606 45.455 0.00 0.00 35.75 2.69
3325 3758 3.136626 AGCCAGTCCCATAGGTATGAAAC 59.863 47.826 0.00 0.00 35.75 2.78
3336 3769 3.420839 GGTATGAAACCCATTTGAGCG 57.579 47.619 0.00 0.00 43.16 5.03
3337 3770 3.013921 GGTATGAAACCCATTTGAGCGA 58.986 45.455 0.00 0.00 43.16 4.93
3338 3771 3.065371 GGTATGAAACCCATTTGAGCGAG 59.935 47.826 0.00 0.00 43.16 5.03
3339 3772 2.559698 TGAAACCCATTTGAGCGAGA 57.440 45.000 0.00 0.00 0.00 4.04
3340 3773 2.426522 TGAAACCCATTTGAGCGAGAG 58.573 47.619 0.00 0.00 0.00 3.20
3341 3774 2.224523 TGAAACCCATTTGAGCGAGAGT 60.225 45.455 0.00 0.00 0.00 3.24
3342 3775 3.007506 TGAAACCCATTTGAGCGAGAGTA 59.992 43.478 0.00 0.00 0.00 2.59
3343 3776 2.969628 ACCCATTTGAGCGAGAGTAG 57.030 50.000 0.00 0.00 0.00 2.57
3344 3777 2.180276 ACCCATTTGAGCGAGAGTAGT 58.820 47.619 0.00 0.00 0.00 2.73
3345 3778 3.362706 ACCCATTTGAGCGAGAGTAGTA 58.637 45.455 0.00 0.00 0.00 1.82
3346 3779 3.130693 ACCCATTTGAGCGAGAGTAGTAC 59.869 47.826 0.00 0.00 0.00 2.73
3347 3780 3.381908 CCCATTTGAGCGAGAGTAGTACT 59.618 47.826 1.37 1.37 0.00 2.73
3348 3781 4.579340 CCCATTTGAGCGAGAGTAGTACTA 59.421 45.833 1.88 0.00 0.00 1.82
3349 3782 5.278071 CCCATTTGAGCGAGAGTAGTACTAG 60.278 48.000 1.87 0.00 0.00 2.57
3350 3783 5.278071 CCATTTGAGCGAGAGTAGTACTAGG 60.278 48.000 1.87 0.00 0.00 3.02
3351 3784 4.750021 TTGAGCGAGAGTAGTACTAGGA 57.250 45.455 1.87 0.00 0.00 2.94
3352 3785 4.959560 TGAGCGAGAGTAGTACTAGGAT 57.040 45.455 1.87 0.00 0.00 3.24
3353 3786 4.633175 TGAGCGAGAGTAGTACTAGGATG 58.367 47.826 1.87 0.00 0.00 3.51
3354 3787 3.998341 GAGCGAGAGTAGTACTAGGATGG 59.002 52.174 1.87 0.00 0.00 3.51
3355 3788 3.075884 GCGAGAGTAGTACTAGGATGGG 58.924 54.545 1.87 0.00 0.00 4.00
3356 3789 3.496515 GCGAGAGTAGTACTAGGATGGGT 60.497 52.174 1.87 0.00 0.00 4.51
3357 3790 4.066490 CGAGAGTAGTACTAGGATGGGTG 58.934 52.174 1.87 0.00 0.00 4.61
3358 3791 4.202336 CGAGAGTAGTACTAGGATGGGTGA 60.202 50.000 1.87 0.00 0.00 4.02
3359 3792 5.051409 AGAGTAGTACTAGGATGGGTGAC 57.949 47.826 1.87 0.00 0.00 3.67
3376 3809 2.058675 ACCTCCTGGTCGTGAAAGG 58.941 57.895 0.00 0.00 44.78 3.11
3377 3810 1.296715 CCTCCTGGTCGTGAAAGGG 59.703 63.158 0.00 0.00 0.00 3.95
3378 3811 1.481056 CCTCCTGGTCGTGAAAGGGT 61.481 60.000 0.00 0.00 0.00 4.34
3379 3812 0.396811 CTCCTGGTCGTGAAAGGGTT 59.603 55.000 0.00 0.00 0.00 4.11
3380 3813 0.841289 TCCTGGTCGTGAAAGGGTTT 59.159 50.000 0.00 0.00 0.00 3.27
3381 3814 1.202722 TCCTGGTCGTGAAAGGGTTTC 60.203 52.381 0.00 0.00 40.08 2.78
3382 3815 1.476110 CCTGGTCGTGAAAGGGTTTCA 60.476 52.381 0.00 0.00 46.68 2.69
3395 3828 7.902087 TGAAAGGGTTTCATATTTAAGGGTTG 58.098 34.615 0.00 0.00 44.21 3.77
3396 3829 7.511028 TGAAAGGGTTTCATATTTAAGGGTTGT 59.489 33.333 0.00 0.00 44.21 3.32
3397 3830 6.850752 AGGGTTTCATATTTAAGGGTTGTG 57.149 37.500 0.00 0.00 0.00 3.33
3398 3831 6.557568 AGGGTTTCATATTTAAGGGTTGTGA 58.442 36.000 0.00 0.00 0.00 3.58
3399 3832 7.189087 AGGGTTTCATATTTAAGGGTTGTGAT 58.811 34.615 0.00 0.00 0.00 3.06
3400 3833 8.340757 AGGGTTTCATATTTAAGGGTTGTGATA 58.659 33.333 0.00 0.00 0.00 2.15
3401 3834 8.630037 GGGTTTCATATTTAAGGGTTGTGATAG 58.370 37.037 0.00 0.00 0.00 2.08
3402 3835 8.630037 GGTTTCATATTTAAGGGTTGTGATAGG 58.370 37.037 0.00 0.00 0.00 2.57
3403 3836 7.817418 TTCATATTTAAGGGTTGTGATAGGC 57.183 36.000 0.00 0.00 0.00 3.93
3404 3837 7.149202 TCATATTTAAGGGTTGTGATAGGCT 57.851 36.000 0.00 0.00 0.00 4.58
3405 3838 7.582719 TCATATTTAAGGGTTGTGATAGGCTT 58.417 34.615 0.00 0.00 0.00 4.35
3406 3839 7.502226 TCATATTTAAGGGTTGTGATAGGCTTG 59.498 37.037 0.00 0.00 0.00 4.01
3407 3840 2.514458 AAGGGTTGTGATAGGCTTGG 57.486 50.000 0.00 0.00 0.00 3.61
3408 3841 0.034089 AGGGTTGTGATAGGCTTGGC 60.034 55.000 0.00 0.00 0.00 4.52
3409 3842 1.376609 GGGTTGTGATAGGCTTGGCG 61.377 60.000 0.00 0.00 0.00 5.69
3410 3843 0.392461 GGTTGTGATAGGCTTGGCGA 60.392 55.000 0.00 0.00 0.00 5.54
3411 3844 0.727398 GTTGTGATAGGCTTGGCGAC 59.273 55.000 0.00 0.00 0.00 5.19
3412 3845 0.392461 TTGTGATAGGCTTGGCGACC 60.392 55.000 0.00 0.00 0.00 4.79
3413 3846 1.220749 GTGATAGGCTTGGCGACCA 59.779 57.895 0.00 0.00 0.00 4.02
3414 3847 0.392461 GTGATAGGCTTGGCGACCAA 60.392 55.000 10.28 10.28 41.69 3.67
3415 3848 0.392461 TGATAGGCTTGGCGACCAAC 60.392 55.000 7.15 5.37 38.75 3.77
3416 3849 1.429148 GATAGGCTTGGCGACCAACG 61.429 60.000 7.15 5.76 38.75 4.10
3417 3850 2.180159 ATAGGCTTGGCGACCAACGT 62.180 55.000 7.15 8.52 38.75 3.99
3418 3851 1.534336 TAGGCTTGGCGACCAACGTA 61.534 55.000 7.15 7.80 38.75 3.57
3419 3852 1.962306 GGCTTGGCGACCAACGTAA 60.962 57.895 7.15 0.00 38.75 3.18
3420 3853 1.508808 GGCTTGGCGACCAACGTAAA 61.509 55.000 7.15 0.00 38.75 2.01
3421 3854 0.308376 GCTTGGCGACCAACGTAAAA 59.692 50.000 7.15 0.00 38.75 1.52
3422 3855 1.268640 GCTTGGCGACCAACGTAAAAA 60.269 47.619 7.15 0.00 38.75 1.94
3423 3856 2.377880 CTTGGCGACCAACGTAAAAAC 58.622 47.619 7.15 0.00 38.75 2.43
3424 3857 1.666054 TGGCGACCAACGTAAAAACT 58.334 45.000 0.00 0.00 44.60 2.66
3425 3858 2.831333 TGGCGACCAACGTAAAAACTA 58.169 42.857 0.00 0.00 44.60 2.24
3426 3859 2.801679 TGGCGACCAACGTAAAAACTAG 59.198 45.455 0.00 0.00 44.60 2.57
3427 3860 2.411935 GGCGACCAACGTAAAAACTAGC 60.412 50.000 0.00 0.00 44.60 3.42
3428 3861 2.411935 GCGACCAACGTAAAAACTAGCC 60.412 50.000 0.00 0.00 44.60 3.93
3429 3862 2.801679 CGACCAACGTAAAAACTAGCCA 59.198 45.455 0.00 0.00 37.22 4.75
3430 3863 3.120786 CGACCAACGTAAAAACTAGCCAG 60.121 47.826 0.00 0.00 37.22 4.85
3431 3864 3.811497 GACCAACGTAAAAACTAGCCAGT 59.189 43.478 0.00 0.00 36.19 4.00
3432 3865 6.978457 CGACCAACGTAAAAACTAGCCAGTT 61.978 44.000 0.00 0.00 40.85 3.16
3433 3866 4.274214 ACCAACGTAAAAACTAGCCAGTTC 59.726 41.667 0.00 0.00 44.41 3.01
3434 3867 4.514066 CCAACGTAAAAACTAGCCAGTTCT 59.486 41.667 0.00 0.00 44.41 3.01
3435 3868 5.008316 CCAACGTAAAAACTAGCCAGTTCTT 59.992 40.000 0.00 0.00 44.41 2.52
3436 3869 6.459161 CCAACGTAAAAACTAGCCAGTTCTTT 60.459 38.462 0.00 4.61 44.41 2.52
3437 3870 6.056428 ACGTAAAAACTAGCCAGTTCTTTG 57.944 37.500 0.00 0.00 44.41 2.77
3438 3871 5.008316 ACGTAAAAACTAGCCAGTTCTTTGG 59.992 40.000 0.00 2.47 44.41 3.28
3439 3872 4.937201 AAAAACTAGCCAGTTCTTTGGG 57.063 40.909 0.00 0.00 44.41 4.12
3441 3874 4.717279 AAACTAGCCAGTTCTTTGGGTA 57.283 40.909 0.00 4.17 46.57 3.69
3442 3875 4.929146 AACTAGCCAGTTCTTTGGGTAT 57.071 40.909 4.61 0.00 46.74 2.73
3443 3876 4.222124 ACTAGCCAGTTCTTTGGGTATG 57.778 45.455 4.61 2.96 46.74 2.39
3444 3877 2.514458 AGCCAGTTCTTTGGGTATGG 57.486 50.000 0.00 0.00 46.57 2.74
3445 3878 1.992557 AGCCAGTTCTTTGGGTATGGA 59.007 47.619 0.00 0.00 46.57 3.41
3446 3879 2.378547 AGCCAGTTCTTTGGGTATGGAA 59.621 45.455 0.00 0.00 46.57 3.53
3447 3880 2.492088 GCCAGTTCTTTGGGTATGGAAC 59.508 50.000 0.00 0.00 38.72 3.62
3448 3881 6.882412 AGCCAGTTCTTTGGGTATGGAACC 62.882 50.000 0.00 0.00 46.57 3.62
3468 3901 3.753294 CCATTTGGGCGAGAGTAGTAT 57.247 47.619 0.00 0.00 0.00 2.12
3469 3902 4.073293 CCATTTGGGCGAGAGTAGTATT 57.927 45.455 0.00 0.00 0.00 1.89
3470 3903 5.209818 CCATTTGGGCGAGAGTAGTATTA 57.790 43.478 0.00 0.00 0.00 0.98
3471 3904 5.230942 CCATTTGGGCGAGAGTAGTATTAG 58.769 45.833 0.00 0.00 0.00 1.73
3472 3905 4.931661 TTTGGGCGAGAGTAGTATTAGG 57.068 45.455 0.00 0.00 0.00 2.69
3473 3906 3.870538 TGGGCGAGAGTAGTATTAGGA 57.129 47.619 0.00 0.00 0.00 2.94
3474 3907 4.383931 TGGGCGAGAGTAGTATTAGGAT 57.616 45.455 0.00 0.00 0.00 3.24
3475 3908 4.079970 TGGGCGAGAGTAGTATTAGGATG 58.920 47.826 0.00 0.00 0.00 3.51
3476 3909 3.444388 GGGCGAGAGTAGTATTAGGATGG 59.556 52.174 0.00 0.00 0.00 3.51
3477 3910 3.444388 GGCGAGAGTAGTATTAGGATGGG 59.556 52.174 0.00 0.00 0.00 4.00
3478 3911 4.080687 GCGAGAGTAGTATTAGGATGGGT 58.919 47.826 0.00 0.00 0.00 4.51
3479 3912 4.082679 GCGAGAGTAGTATTAGGATGGGTG 60.083 50.000 0.00 0.00 0.00 4.61
3480 3913 5.314529 CGAGAGTAGTATTAGGATGGGTGA 58.685 45.833 0.00 0.00 0.00 4.02
3481 3914 5.181622 CGAGAGTAGTATTAGGATGGGTGAC 59.818 48.000 0.00 0.00 0.00 3.67
3493 3926 4.234673 GGTGACCTCCTGGGAAGT 57.765 61.111 0.00 0.00 38.76 3.01
3494 3927 1.984020 GGTGACCTCCTGGGAAGTC 59.016 63.158 10.52 10.52 36.44 3.01
3495 3928 0.545548 GGTGACCTCCTGGGAAGTCT 60.546 60.000 16.40 0.00 36.74 3.24
3496 3929 1.353091 GTGACCTCCTGGGAAGTCTT 58.647 55.000 16.40 0.00 36.74 3.01
3497 3930 1.276705 GTGACCTCCTGGGAAGTCTTC 59.723 57.143 16.40 3.80 36.74 2.87
3498 3931 0.533032 GACCTCCTGGGAAGTCTTCG 59.467 60.000 10.24 0.00 38.76 3.79
3499 3932 0.178929 ACCTCCTGGGAAGTCTTCGT 60.179 55.000 6.50 0.00 38.76 3.85
3500 3933 0.247736 CCTCCTGGGAAGTCTTCGTG 59.752 60.000 6.50 0.00 37.23 4.35
3501 3934 1.257743 CTCCTGGGAAGTCTTCGTGA 58.742 55.000 6.50 0.29 0.00 4.35
3502 3935 1.618837 CTCCTGGGAAGTCTTCGTGAA 59.381 52.381 6.50 0.00 0.00 3.18
3503 3936 2.037251 CTCCTGGGAAGTCTTCGTGAAA 59.963 50.000 6.50 0.00 0.00 2.69
3504 3937 2.037251 TCCTGGGAAGTCTTCGTGAAAG 59.963 50.000 6.50 0.33 36.22 2.62
3505 3938 2.417719 CTGGGAAGTCTTCGTGAAAGG 58.582 52.381 6.50 0.00 35.54 3.11
3506 3939 1.071699 TGGGAAGTCTTCGTGAAAGGG 59.928 52.381 6.50 0.00 35.54 3.95
3507 3940 1.071857 GGGAAGTCTTCGTGAAAGGGT 59.928 52.381 6.50 0.00 35.54 4.34
3508 3941 2.486727 GGGAAGTCTTCGTGAAAGGGTT 60.487 50.000 6.50 0.00 35.54 4.11
3509 3942 3.211865 GGAAGTCTTCGTGAAAGGGTTT 58.788 45.455 6.50 0.00 35.54 3.27
3510 3943 3.250280 GGAAGTCTTCGTGAAAGGGTTTC 59.750 47.826 6.50 0.00 40.08 2.78
3511 3944 3.553828 AGTCTTCGTGAAAGGGTTTCA 57.446 42.857 0.00 0.00 46.68 2.69
3521 3954 5.975988 TGAAAGGGTTTCATATCTAGCCT 57.024 39.130 0.00 0.00 44.21 4.58
3523 3956 6.827727 TGAAAGGGTTTCATATCTAGCCTAC 58.172 40.000 0.00 0.00 44.21 3.18
3524 3957 5.827326 AAGGGTTTCATATCTAGCCTACC 57.173 43.478 0.00 0.00 38.75 3.18
3525 3958 4.168883 AGGGTTTCATATCTAGCCTACCC 58.831 47.826 0.00 0.00 43.42 3.69
3526 3959 3.263681 GGGTTTCATATCTAGCCTACCCC 59.736 52.174 0.00 0.00 38.39 4.95
3527 3960 3.908103 GGTTTCATATCTAGCCTACCCCA 59.092 47.826 0.00 0.00 0.00 4.96
3528 3961 4.349930 GGTTTCATATCTAGCCTACCCCAA 59.650 45.833 0.00 0.00 0.00 4.12
3529 3962 5.306394 GTTTCATATCTAGCCTACCCCAAC 58.694 45.833 0.00 0.00 0.00 3.77
3530 3963 4.487282 TCATATCTAGCCTACCCCAACT 57.513 45.455 0.00 0.00 0.00 3.16
3531 3964 4.827789 TCATATCTAGCCTACCCCAACTT 58.172 43.478 0.00 0.00 0.00 2.66
3532 3965 4.593206 TCATATCTAGCCTACCCCAACTTG 59.407 45.833 0.00 0.00 0.00 3.16
3533 3966 2.337359 TCTAGCCTACCCCAACTTGT 57.663 50.000 0.00 0.00 0.00 3.16
3534 3967 2.627933 TCTAGCCTACCCCAACTTGTT 58.372 47.619 0.00 0.00 0.00 2.83
3535 3968 2.983898 TCTAGCCTACCCCAACTTGTTT 59.016 45.455 0.00 0.00 0.00 2.83
3536 3969 1.995376 AGCCTACCCCAACTTGTTTG 58.005 50.000 0.00 0.00 34.63 2.93
3548 3981 5.213891 CAACTTGTTTGGGATAAAAGGCT 57.786 39.130 0.00 0.00 0.00 4.58
3549 3982 5.610398 CAACTTGTTTGGGATAAAAGGCTT 58.390 37.500 0.00 0.00 0.00 4.35
3550 3983 5.468540 ACTTGTTTGGGATAAAAGGCTTC 57.531 39.130 0.00 0.00 0.00 3.86
3551 3984 4.022329 ACTTGTTTGGGATAAAAGGCTTCG 60.022 41.667 0.00 0.00 0.00 3.79
3552 3985 3.492337 TGTTTGGGATAAAAGGCTTCGT 58.508 40.909 0.00 0.00 0.00 3.85
3553 3986 4.653868 TGTTTGGGATAAAAGGCTTCGTA 58.346 39.130 0.00 0.00 0.00 3.43
3554 3987 5.071370 TGTTTGGGATAAAAGGCTTCGTAA 58.929 37.500 0.00 0.00 0.00 3.18
3555 3988 5.182380 TGTTTGGGATAAAAGGCTTCGTAAG 59.818 40.000 0.00 0.00 0.00 2.34
3556 3989 4.563140 TGGGATAAAAGGCTTCGTAAGT 57.437 40.909 0.00 0.00 39.48 2.24
3557 3990 5.680594 TGGGATAAAAGGCTTCGTAAGTA 57.319 39.130 0.00 0.00 39.48 2.24
3558 3991 6.052405 TGGGATAAAAGGCTTCGTAAGTAA 57.948 37.500 0.00 0.00 39.48 2.24
3559 3992 6.110707 TGGGATAAAAGGCTTCGTAAGTAAG 58.889 40.000 0.00 0.00 39.48 2.34
3560 3993 6.111382 GGGATAAAAGGCTTCGTAAGTAAGT 58.889 40.000 0.00 0.00 39.48 2.24
3561 3994 7.093377 TGGGATAAAAGGCTTCGTAAGTAAGTA 60.093 37.037 0.00 0.00 39.48 2.24
3562 3995 7.930325 GGGATAAAAGGCTTCGTAAGTAAGTAT 59.070 37.037 0.00 0.00 39.48 2.12
3563 3996 8.762426 GGATAAAAGGCTTCGTAAGTAAGTATG 58.238 37.037 0.00 0.00 39.48 2.39
3607 4043 2.656947 AACCAGTGCATTGTACACCT 57.343 45.000 8.53 0.00 38.87 4.00
3629 4066 7.602644 CACCTAGATAAGTTTACTTGCACTTGA 59.397 37.037 5.41 0.00 37.40 3.02
3677 4114 6.540914 AGAGTACACTGTATTCTCTAGCTGAC 59.459 42.308 8.12 0.00 34.34 3.51
3678 4115 4.993029 ACACTGTATTCTCTAGCTGACC 57.007 45.455 0.00 0.00 0.00 4.02
3679 4116 4.344978 ACACTGTATTCTCTAGCTGACCA 58.655 43.478 0.00 0.00 0.00 4.02
3709 4146 3.671702 GCAGTTGGAAATTGTAGCTGAGC 60.672 47.826 0.00 0.00 35.77 4.26
3858 4300 4.895297 TGTGTATCCATCAGTATCTCTGCA 59.105 41.667 0.00 0.00 43.32 4.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 4.195416 GCTCTATTGTTTCTTCCTCCTGG 58.805 47.826 0.00 0.00 0.00 4.45
103 104 2.171003 GTCCAATCCAACTTCCCCAAG 58.829 52.381 0.00 0.00 35.50 3.61
203 206 2.993899 ACAACGTCAGCAATAGTAGTGC 59.006 45.455 14.59 14.59 42.55 4.40
250 253 0.466372 TTGCCCCATCAAACACGACA 60.466 50.000 0.00 0.00 0.00 4.35
270 273 2.747460 GCTCAGCAACCGATGGCA 60.747 61.111 0.00 0.00 0.00 4.92
412 419 4.287067 AGAACACATACAACTCCACTCCAT 59.713 41.667 0.00 0.00 0.00 3.41
531 565 9.220767 GTTGAAACTATCCTCAAAGTTCACTAT 57.779 33.333 0.00 0.00 34.91 2.12
532 566 8.429641 AGTTGAAACTATCCTCAAAGTTCACTA 58.570 33.333 0.00 0.00 37.52 2.74
533 567 7.283329 AGTTGAAACTATCCTCAAAGTTCACT 58.717 34.615 0.00 0.00 37.52 3.41
534 568 7.497925 AGTTGAAACTATCCTCAAAGTTCAC 57.502 36.000 0.00 0.00 37.52 3.18
535 569 9.052759 GTTAGTTGAAACTATCCTCAAAGTTCA 57.947 33.333 3.84 0.00 40.87 3.18
536 570 9.052759 TGTTAGTTGAAACTATCCTCAAAGTTC 57.947 33.333 3.84 0.00 40.87 3.01
558 592 7.261325 TGCTCATTTTGTTGCTTTAGTTGTTA 58.739 30.769 0.00 0.00 0.00 2.41
567 601 6.930164 TGATGTTTATGCTCATTTTGTTGCTT 59.070 30.769 0.00 0.00 0.00 3.91
671 708 0.727398 GGCGACGCTTTGCTATTTCT 59.273 50.000 20.77 0.00 31.91 2.52
695 732 3.246021 ACGGAGGGGGTATTATAGATGCT 60.246 47.826 0.00 0.00 0.00 3.79
701 738 1.710244 TCGGACGGAGGGGGTATTATA 59.290 52.381 0.00 0.00 0.00 0.98
704 741 0.618393 TTTCGGACGGAGGGGGTATT 60.618 55.000 0.00 0.00 0.00 1.89
705 742 0.618393 TTTTCGGACGGAGGGGGTAT 60.618 55.000 0.00 0.00 0.00 2.73
706 743 0.835543 TTTTTCGGACGGAGGGGGTA 60.836 55.000 0.00 0.00 0.00 3.69
707 744 2.148717 TTTTTCGGACGGAGGGGGT 61.149 57.895 0.00 0.00 0.00 4.95
708 745 2.751688 TTTTTCGGACGGAGGGGG 59.248 61.111 0.00 0.00 0.00 5.40
722 759 7.454260 AGAGACAAACTTGAGACAAGTTTTT 57.546 32.000 28.20 24.49 45.20 1.94
723 760 7.454260 AAGAGACAAACTTGAGACAAGTTTT 57.546 32.000 28.20 21.71 45.20 2.43
725 762 8.561738 TTTAAGAGACAAACTTGAGACAAGTT 57.438 30.769 19.66 19.66 41.82 2.66
726 763 8.738645 ATTTAAGAGACAAACTTGAGACAAGT 57.261 30.769 10.73 10.73 0.00 3.16
740 777 8.237949 GCGCTAGATACATCTATTTAAGAGACA 58.762 37.037 0.00 0.00 38.60 3.41
741 778 8.455682 AGCGCTAGATACATCTATTTAAGAGAC 58.544 37.037 8.99 0.00 38.60 3.36
742 779 8.568676 AGCGCTAGATACATCTATTTAAGAGA 57.431 34.615 8.99 0.00 38.60 3.10
747 784 9.841880 CAAGTTAGCGCTAGATACATCTATTTA 57.158 33.333 17.98 0.00 38.60 1.40
748 785 8.577296 TCAAGTTAGCGCTAGATACATCTATTT 58.423 33.333 17.98 0.00 38.60 1.40
749 786 8.112016 TCAAGTTAGCGCTAGATACATCTATT 57.888 34.615 17.98 0.74 38.60 1.73
750 787 7.689446 TCAAGTTAGCGCTAGATACATCTAT 57.311 36.000 17.98 0.00 38.60 1.98
751 788 7.530863 CATCAAGTTAGCGCTAGATACATCTA 58.469 38.462 17.98 0.00 38.32 1.98
752 789 6.385843 CATCAAGTTAGCGCTAGATACATCT 58.614 40.000 17.98 0.00 40.86 2.90
753 790 5.061560 GCATCAAGTTAGCGCTAGATACATC 59.938 44.000 17.98 1.72 0.00 3.06
754 791 4.926238 GCATCAAGTTAGCGCTAGATACAT 59.074 41.667 17.98 3.36 0.00 2.29
755 792 4.038042 AGCATCAAGTTAGCGCTAGATACA 59.962 41.667 17.98 0.00 0.00 2.29
756 793 4.551388 AGCATCAAGTTAGCGCTAGATAC 58.449 43.478 17.98 13.22 0.00 2.24
757 794 4.855715 AGCATCAAGTTAGCGCTAGATA 57.144 40.909 17.98 0.00 0.00 1.98
758 795 3.742433 AGCATCAAGTTAGCGCTAGAT 57.258 42.857 17.98 13.60 0.00 1.98
761 798 4.855715 ATCTAGCATCAAGTTAGCGCTA 57.144 40.909 14.45 14.45 34.18 4.26
762 799 3.742433 ATCTAGCATCAAGTTAGCGCT 57.258 42.857 17.26 17.26 36.72 5.92
763 800 4.299155 TGTATCTAGCATCAAGTTAGCGC 58.701 43.478 0.00 0.00 31.70 5.92
764 801 6.642540 TGAATGTATCTAGCATCAAGTTAGCG 59.357 38.462 0.00 0.00 31.70 4.26
765 802 7.953158 TGAATGTATCTAGCATCAAGTTAGC 57.047 36.000 0.00 0.00 31.70 3.09
766 803 9.926158 AGATGAATGTATCTAGCATCAAGTTAG 57.074 33.333 0.00 0.00 38.19 2.34
767 804 9.702494 CAGATGAATGTATCTAGCATCAAGTTA 57.298 33.333 0.00 0.00 38.19 2.24
768 805 8.427276 TCAGATGAATGTATCTAGCATCAAGTT 58.573 33.333 0.00 0.00 38.19 2.66
769 806 7.960262 TCAGATGAATGTATCTAGCATCAAGT 58.040 34.615 0.00 0.00 38.19 3.16
770 807 7.546316 CCTCAGATGAATGTATCTAGCATCAAG 59.454 40.741 0.00 0.00 38.19 3.02
771 808 7.384477 CCTCAGATGAATGTATCTAGCATCAA 58.616 38.462 0.00 0.00 38.19 2.57
772 809 6.070938 CCCTCAGATGAATGTATCTAGCATCA 60.071 42.308 0.00 0.00 38.19 3.07
773 810 6.154192 TCCCTCAGATGAATGTATCTAGCATC 59.846 42.308 0.00 0.00 35.70 3.91
774 811 6.021672 TCCCTCAGATGAATGTATCTAGCAT 58.978 40.000 0.00 0.00 35.70 3.79
775 812 5.244851 GTCCCTCAGATGAATGTATCTAGCA 59.755 44.000 0.00 0.00 35.70 3.49
776 813 5.244851 TGTCCCTCAGATGAATGTATCTAGC 59.755 44.000 0.00 0.00 35.70 3.42
777 814 6.907853 TGTCCCTCAGATGAATGTATCTAG 57.092 41.667 0.00 0.00 35.70 2.43
778 815 6.239430 GCTTGTCCCTCAGATGAATGTATCTA 60.239 42.308 0.00 0.00 35.70 1.98
779 816 5.454471 GCTTGTCCCTCAGATGAATGTATCT 60.454 44.000 0.00 0.00 37.90 1.98
780 817 4.754114 GCTTGTCCCTCAGATGAATGTATC 59.246 45.833 0.00 0.00 0.00 2.24
781 818 4.411540 AGCTTGTCCCTCAGATGAATGTAT 59.588 41.667 0.00 0.00 0.00 2.29
782 819 3.776969 AGCTTGTCCCTCAGATGAATGTA 59.223 43.478 0.00 0.00 0.00 2.29
783 820 2.575279 AGCTTGTCCCTCAGATGAATGT 59.425 45.455 0.00 0.00 0.00 2.71
784 821 3.278668 AGCTTGTCCCTCAGATGAATG 57.721 47.619 0.00 0.00 0.00 2.67
785 822 4.313020 AAAGCTTGTCCCTCAGATGAAT 57.687 40.909 0.00 0.00 0.00 2.57
786 823 3.795688 AAAGCTTGTCCCTCAGATGAA 57.204 42.857 0.00 0.00 0.00 2.57
787 824 3.795688 AAAAGCTTGTCCCTCAGATGA 57.204 42.857 0.00 0.00 0.00 2.92
788 825 3.822735 TGAAAAAGCTTGTCCCTCAGATG 59.177 43.478 0.00 0.00 0.00 2.90
789 826 4.077822 CTGAAAAAGCTTGTCCCTCAGAT 58.922 43.478 10.23 0.00 32.39 2.90
790 827 3.136443 TCTGAAAAAGCTTGTCCCTCAGA 59.864 43.478 13.34 13.34 36.41 3.27
791 828 3.251972 GTCTGAAAAAGCTTGTCCCTCAG 59.748 47.826 9.67 9.67 0.00 3.35
792 829 3.214328 GTCTGAAAAAGCTTGTCCCTCA 58.786 45.455 0.00 0.00 0.00 3.86
793 830 2.224314 CGTCTGAAAAAGCTTGTCCCTC 59.776 50.000 0.00 0.00 0.00 4.30
794 831 2.222027 CGTCTGAAAAAGCTTGTCCCT 58.778 47.619 0.00 0.00 0.00 4.20
795 832 1.266989 CCGTCTGAAAAAGCTTGTCCC 59.733 52.381 0.00 0.00 0.00 4.46
796 833 2.218603 TCCGTCTGAAAAAGCTTGTCC 58.781 47.619 0.00 0.00 0.00 4.02
797 834 2.224314 CCTCCGTCTGAAAAAGCTTGTC 59.776 50.000 0.00 1.07 0.00 3.18
798 835 2.222027 CCTCCGTCTGAAAAAGCTTGT 58.778 47.619 0.00 0.00 0.00 3.16
799 836 1.537202 CCCTCCGTCTGAAAAAGCTTG 59.463 52.381 0.00 0.00 0.00 4.01
800 837 1.420138 TCCCTCCGTCTGAAAAAGCTT 59.580 47.619 0.00 0.00 0.00 3.74
801 838 1.002544 CTCCCTCCGTCTGAAAAAGCT 59.997 52.381 0.00 0.00 0.00 3.74
802 839 1.443802 CTCCCTCCGTCTGAAAAAGC 58.556 55.000 0.00 0.00 0.00 3.51
803 840 1.270839 TGCTCCCTCCGTCTGAAAAAG 60.271 52.381 0.00 0.00 0.00 2.27
804 841 0.762418 TGCTCCCTCCGTCTGAAAAA 59.238 50.000 0.00 0.00 0.00 1.94
805 842 0.034896 GTGCTCCCTCCGTCTGAAAA 59.965 55.000 0.00 0.00 0.00 2.29
806 843 1.671742 GTGCTCCCTCCGTCTGAAA 59.328 57.895 0.00 0.00 0.00 2.69
807 844 2.636412 CGTGCTCCCTCCGTCTGAA 61.636 63.158 0.00 0.00 0.00 3.02
808 845 3.062466 CGTGCTCCCTCCGTCTGA 61.062 66.667 0.00 0.00 0.00 3.27
809 846 3.057547 CTCGTGCTCCCTCCGTCTG 62.058 68.421 0.00 0.00 0.00 3.51
810 847 2.752238 CTCGTGCTCCCTCCGTCT 60.752 66.667 0.00 0.00 0.00 4.18
811 848 4.500116 GCTCGTGCTCCCTCCGTC 62.500 72.222 1.41 0.00 36.03 4.79
813 850 3.589654 TTTGCTCGTGCTCCCTCCG 62.590 63.158 11.19 0.00 40.48 4.63
814 851 1.743252 CTTTGCTCGTGCTCCCTCC 60.743 63.158 11.19 0.00 40.48 4.30
815 852 0.603975 AACTTTGCTCGTGCTCCCTC 60.604 55.000 11.19 0.00 40.48 4.30
816 853 0.886490 CAACTTTGCTCGTGCTCCCT 60.886 55.000 11.19 0.00 40.48 4.20
817 854 1.576421 CAACTTTGCTCGTGCTCCC 59.424 57.895 11.19 0.00 40.48 4.30
846 883 3.041211 AGGATAGCAGCCACTTCACATA 58.959 45.455 0.00 0.00 0.00 2.29
857 894 0.034616 ATCGAAGCCAGGATAGCAGC 59.965 55.000 0.00 0.00 0.00 5.25
906 945 3.132824 CAGAGTTTTGTCCCCTGCTTTTT 59.867 43.478 0.00 0.00 0.00 1.94
985 1024 0.321919 GTCATTGCTGGCTGGAGTGA 60.322 55.000 6.96 6.96 30.97 3.41
986 1025 0.607217 TGTCATTGCTGGCTGGAGTG 60.607 55.000 2.29 2.29 0.00 3.51
987 1026 0.322277 CTGTCATTGCTGGCTGGAGT 60.322 55.000 0.00 0.00 0.00 3.85
988 1027 0.035725 TCTGTCATTGCTGGCTGGAG 60.036 55.000 0.00 0.00 0.00 3.86
989 1028 0.321919 GTCTGTCATTGCTGGCTGGA 60.322 55.000 0.00 0.00 0.00 3.86
990 1029 1.642037 CGTCTGTCATTGCTGGCTGG 61.642 60.000 0.00 0.00 0.00 4.85
991 1030 0.671472 TCGTCTGTCATTGCTGGCTG 60.671 55.000 0.00 0.00 0.00 4.85
1086 1125 3.474570 CAGAAGGGGAGGGCGGAG 61.475 72.222 0.00 0.00 0.00 4.63
1546 1585 1.743995 CCGCGTAAAAGGAGTGGGG 60.744 63.158 4.92 0.00 32.29 4.96
1550 1589 1.071814 TTGGCCGCGTAAAAGGAGT 59.928 52.632 4.92 0.00 0.00 3.85
1703 1742 2.579787 CGGTGGCGTCGATCAGAC 60.580 66.667 0.00 7.40 46.16 3.51
1794 1833 0.244721 GCATCAGCCCCTTGAACAAC 59.755 55.000 0.00 0.00 33.58 3.32
1892 1931 1.656441 CAGGCCTCAAACACTGCAC 59.344 57.895 0.00 0.00 0.00 4.57
1940 1979 1.477700 CTGAAGAGCTCCTCCACTCTG 59.522 57.143 10.93 0.00 42.41 3.35
1965 2004 1.220206 CATCGGCAGCCTCTTCACT 59.780 57.895 10.54 0.00 0.00 3.41
2176 2441 9.555727 TCTACTAAGCTAACAAAAATGACAACT 57.444 29.630 0.00 0.00 0.00 3.16
2183 2448 8.792830 TCTGCATCTACTAAGCTAACAAAAAT 57.207 30.769 0.00 0.00 0.00 1.82
2209 2481 5.023452 AGACCAACCATGACTATCTGTACA 58.977 41.667 0.00 0.00 0.00 2.90
2225 2499 3.618690 ACATAGAGGCAGAAGACCAAC 57.381 47.619 0.00 0.00 0.00 3.77
2268 2542 9.265901 CAATTCTATCCCAACTCTATGTAACAG 57.734 37.037 0.00 0.00 0.00 3.16
2276 2551 6.884472 TGGTTCAATTCTATCCCAACTCTA 57.116 37.500 0.00 0.00 0.00 2.43
2475 2838 8.658499 ACTACTAACTCGTTTCTCAAAATGTT 57.342 30.769 0.00 0.00 33.81 2.71
2476 2839 7.384387 GGACTACTAACTCGTTTCTCAAAATGT 59.616 37.037 0.00 0.00 33.81 2.71
2564 2937 6.151985 GGGGAGACTACAGACAGTCATATATG 59.848 46.154 6.36 6.36 46.15 1.78
2603 2976 3.456277 AGGCAAGATGACCCTAGTTAAGG 59.544 47.826 0.00 0.00 46.09 2.69
2680 3089 4.577693 TCAGCTTGCTTCTTTGCCATATAG 59.422 41.667 0.00 0.00 0.00 1.31
2681 3090 4.525996 TCAGCTTGCTTCTTTGCCATATA 58.474 39.130 0.00 0.00 0.00 0.86
2682 3091 3.359033 TCAGCTTGCTTCTTTGCCATAT 58.641 40.909 0.00 0.00 0.00 1.78
2686 3095 1.242076 TCTCAGCTTGCTTCTTTGCC 58.758 50.000 0.00 0.00 0.00 4.52
2714 3123 7.206981 TGAAATTGCAAAACAAGGAAAAACA 57.793 28.000 1.71 0.00 42.87 2.83
2723 3132 4.478206 TCCACCTGAAATTGCAAAACAA 57.522 36.364 1.71 0.00 44.01 2.83
2725 3134 3.187022 GCATCCACCTGAAATTGCAAAAC 59.813 43.478 1.71 0.00 0.00 2.43
2815 3225 4.408921 TGATTGGTCCATATTCTTCGACCT 59.591 41.667 6.64 0.00 44.29 3.85
2821 3231 4.655963 CCGGATGATTGGTCCATATTCTT 58.344 43.478 0.00 0.00 35.41 2.52
2847 3257 1.133216 TCGCTGTGAGCATCTACTGAC 59.867 52.381 0.00 0.00 42.58 3.51
2946 3356 1.126846 CAAAGGCAGACGAACATCGAC 59.873 52.381 6.78 0.14 43.74 4.20
2947 3357 1.000394 TCAAAGGCAGACGAACATCGA 60.000 47.619 6.78 0.00 43.74 3.59
2956 3366 4.816925 AGTTAAGACTTGTCAAAGGCAGAC 59.183 41.667 0.00 0.00 44.75 3.51
3087 3511 5.091261 TCACCTGAAAGAGGAATAGAAGC 57.909 43.478 0.00 0.00 46.33 3.86
3117 3541 7.121315 AGGCAAAATAGTCTCAGGTTACATTTC 59.879 37.037 0.00 0.00 0.00 2.17
3156 3588 2.471743 GCGCATCCTCGTTACAGAATAC 59.528 50.000 0.30 0.00 0.00 1.89
3204 3637 8.408043 AAGACATAGATCCATGACAACAAAAA 57.592 30.769 8.20 0.00 0.00 1.94
3213 3646 5.397360 TGCCTAGAAGACATAGATCCATGA 58.603 41.667 8.20 0.00 0.00 3.07
3218 3651 5.901552 GGCTATGCCTAGAAGACATAGATC 58.098 45.833 18.37 10.33 46.69 2.75
3219 3652 5.930837 GGCTATGCCTAGAAGACATAGAT 57.069 43.478 18.37 0.00 46.69 1.98
3233 3666 2.203209 CTTGGGACCGGCTATGCC 60.203 66.667 0.00 0.00 46.75 4.40
3234 3667 2.902343 GCTTGGGACCGGCTATGC 60.902 66.667 0.00 0.00 0.00 3.14
3235 3668 2.203209 GGCTTGGGACCGGCTATG 60.203 66.667 0.00 0.00 0.00 2.23
3236 3669 3.489513 GGGCTTGGGACCGGCTAT 61.490 66.667 0.00 0.00 0.00 2.97
3246 3679 1.077716 CTCCTTTACCCGGGCTTGG 60.078 63.158 24.08 17.99 0.00 3.61
3247 3680 1.077716 CCTCCTTTACCCGGGCTTG 60.078 63.158 24.08 8.51 0.00 4.01
3248 3681 1.229723 TCCTCCTTTACCCGGGCTT 60.230 57.895 24.08 4.08 0.00 4.35
3249 3682 1.689582 CTCCTCCTTTACCCGGGCT 60.690 63.158 24.08 10.93 0.00 5.19
3250 3683 2.743179 CCTCCTCCTTTACCCGGGC 61.743 68.421 24.08 0.00 0.00 6.13
3251 3684 2.070650 CCCTCCTCCTTTACCCGGG 61.071 68.421 22.25 22.25 0.00 5.73
3252 3685 0.912968 AACCCTCCTCCTTTACCCGG 60.913 60.000 0.00 0.00 0.00 5.73
3253 3686 0.252197 CAACCCTCCTCCTTTACCCG 59.748 60.000 0.00 0.00 0.00 5.28
3254 3687 1.004394 CACAACCCTCCTCCTTTACCC 59.996 57.143 0.00 0.00 0.00 3.69
3255 3688 1.982958 TCACAACCCTCCTCCTTTACC 59.017 52.381 0.00 0.00 0.00 2.85
3256 3689 4.141688 CCTATCACAACCCTCCTCCTTTAC 60.142 50.000 0.00 0.00 0.00 2.01
3257 3690 4.037927 CCTATCACAACCCTCCTCCTTTA 58.962 47.826 0.00 0.00 0.00 1.85
3258 3691 2.846827 CCTATCACAACCCTCCTCCTTT 59.153 50.000 0.00 0.00 0.00 3.11
3259 3692 2.482494 CCTATCACAACCCTCCTCCTT 58.518 52.381 0.00 0.00 0.00 3.36
3260 3693 1.972207 GCCTATCACAACCCTCCTCCT 60.972 57.143 0.00 0.00 0.00 3.69
3261 3694 0.470341 GCCTATCACAACCCTCCTCC 59.530 60.000 0.00 0.00 0.00 4.30
3262 3695 1.501582 AGCCTATCACAACCCTCCTC 58.498 55.000 0.00 0.00 0.00 3.71
3263 3696 1.561542 CAAGCCTATCACAACCCTCCT 59.438 52.381 0.00 0.00 0.00 3.69
3264 3697 1.408822 CCAAGCCTATCACAACCCTCC 60.409 57.143 0.00 0.00 0.00 4.30
3265 3698 2.019156 GCCAAGCCTATCACAACCCTC 61.019 57.143 0.00 0.00 0.00 4.30
3266 3699 0.034089 GCCAAGCCTATCACAACCCT 60.034 55.000 0.00 0.00 0.00 4.34
3267 3700 1.376609 CGCCAAGCCTATCACAACCC 61.377 60.000 0.00 0.00 0.00 4.11
3268 3701 0.392461 TCGCCAAGCCTATCACAACC 60.392 55.000 0.00 0.00 0.00 3.77
3269 3702 1.009829 CTCGCCAAGCCTATCACAAC 58.990 55.000 0.00 0.00 0.00 3.32
3270 3703 0.744414 GCTCGCCAAGCCTATCACAA 60.744 55.000 0.00 0.00 45.92 3.33
3271 3704 1.153369 GCTCGCCAAGCCTATCACA 60.153 57.895 0.00 0.00 45.92 3.58
3272 3705 3.724494 GCTCGCCAAGCCTATCAC 58.276 61.111 0.00 0.00 45.92 3.06
3282 3715 0.308376 GTTTTTACGTTGGCTCGCCA 59.692 50.000 6.52 6.52 45.63 5.69
3283 3716 0.589708 AGTTTTTACGTTGGCTCGCC 59.410 50.000 0.00 0.00 0.00 5.54
3284 3717 2.723923 GCTAGTTTTTACGTTGGCTCGC 60.724 50.000 0.00 0.00 0.00 5.03
3285 3718 2.159747 GGCTAGTTTTTACGTTGGCTCG 60.160 50.000 0.00 1.70 0.00 5.03
3286 3719 2.809696 TGGCTAGTTTTTACGTTGGCTC 59.190 45.455 0.00 0.00 0.00 4.70
3287 3720 2.812011 CTGGCTAGTTTTTACGTTGGCT 59.188 45.455 0.00 0.00 0.00 4.75
3288 3721 2.551032 ACTGGCTAGTTTTTACGTTGGC 59.449 45.455 0.00 0.00 31.66 4.52
3289 3722 3.187842 GGACTGGCTAGTTTTTACGTTGG 59.812 47.826 3.47 0.00 37.25 3.77
3290 3723 3.187842 GGGACTGGCTAGTTTTTACGTTG 59.812 47.826 3.47 0.00 37.25 4.10
3291 3724 3.181452 TGGGACTGGCTAGTTTTTACGTT 60.181 43.478 3.47 0.00 37.25 3.99
3292 3725 2.369532 TGGGACTGGCTAGTTTTTACGT 59.630 45.455 3.47 0.00 37.25 3.57
3293 3726 3.048337 TGGGACTGGCTAGTTTTTACG 57.952 47.619 3.47 0.00 37.25 3.18
3294 3727 5.123936 CCTATGGGACTGGCTAGTTTTTAC 58.876 45.833 3.47 0.00 37.25 2.01
3295 3728 4.786454 ACCTATGGGACTGGCTAGTTTTTA 59.214 41.667 3.47 0.00 37.25 1.52
3296 3729 3.591977 ACCTATGGGACTGGCTAGTTTTT 59.408 43.478 3.47 0.00 37.25 1.94
3297 3730 3.190439 ACCTATGGGACTGGCTAGTTTT 58.810 45.455 3.47 0.00 37.25 2.43
3298 3731 2.846950 ACCTATGGGACTGGCTAGTTT 58.153 47.619 3.47 0.00 37.25 2.66
3299 3732 2.570386 ACCTATGGGACTGGCTAGTT 57.430 50.000 3.47 0.00 37.25 2.24
3300 3733 3.142217 TCATACCTATGGGACTGGCTAGT 59.858 47.826 0.69 0.69 35.65 2.57
3301 3734 3.779444 TCATACCTATGGGACTGGCTAG 58.221 50.000 0.25 0.00 34.50 3.42
3302 3735 3.915346 TCATACCTATGGGACTGGCTA 57.085 47.619 0.25 0.00 34.50 3.93
3303 3736 2.795291 TCATACCTATGGGACTGGCT 57.205 50.000 0.25 0.00 34.50 4.75
3304 3737 3.477530 GTTTCATACCTATGGGACTGGC 58.522 50.000 0.25 0.00 34.50 4.85
3305 3738 3.181443 GGGTTTCATACCTATGGGACTGG 60.181 52.174 0.25 0.00 46.86 4.00
3306 3739 3.458118 TGGGTTTCATACCTATGGGACTG 59.542 47.826 0.25 0.00 46.86 3.51
3307 3740 3.743132 TGGGTTTCATACCTATGGGACT 58.257 45.455 0.25 0.00 46.86 3.85
3308 3741 4.724279 ATGGGTTTCATACCTATGGGAC 57.276 45.455 0.25 0.00 45.57 4.46
3309 3742 5.194740 TCAAATGGGTTTCATACCTATGGGA 59.805 40.000 0.25 0.00 46.51 4.37
3310 3743 5.454062 TCAAATGGGTTTCATACCTATGGG 58.546 41.667 0.00 0.00 46.51 4.00
3311 3744 5.010012 GCTCAAATGGGTTTCATACCTATGG 59.990 44.000 0.00 0.00 46.51 2.74
3312 3745 5.277974 CGCTCAAATGGGTTTCATACCTATG 60.278 44.000 0.00 0.00 46.51 2.23
3314 3747 4.080807 TCGCTCAAATGGGTTTCATACCTA 60.081 41.667 0.00 0.00 46.86 3.08
3315 3748 3.016736 CGCTCAAATGGGTTTCATACCT 58.983 45.455 0.00 0.00 46.86 3.08
3316 3749 3.013921 TCGCTCAAATGGGTTTCATACC 58.986 45.455 0.00 0.00 46.99 2.73
3317 3750 3.938963 TCTCGCTCAAATGGGTTTCATAC 59.061 43.478 0.00 0.00 34.44 2.39
3318 3751 4.191544 CTCTCGCTCAAATGGGTTTCATA 58.808 43.478 0.00 0.00 34.44 2.15
3319 3752 3.012518 CTCTCGCTCAAATGGGTTTCAT 58.987 45.455 0.00 0.00 37.79 2.57
3320 3753 2.224523 ACTCTCGCTCAAATGGGTTTCA 60.225 45.455 0.00 0.00 0.00 2.69
3321 3754 2.427506 ACTCTCGCTCAAATGGGTTTC 58.572 47.619 0.00 0.00 0.00 2.78
3322 3755 2.568623 ACTCTCGCTCAAATGGGTTT 57.431 45.000 0.00 0.00 0.00 3.27
3323 3756 2.567615 ACTACTCTCGCTCAAATGGGTT 59.432 45.455 0.00 0.00 0.00 4.11
3324 3757 2.180276 ACTACTCTCGCTCAAATGGGT 58.820 47.619 0.00 0.00 0.00 4.51
3325 3758 2.969628 ACTACTCTCGCTCAAATGGG 57.030 50.000 0.00 0.00 0.00 4.00
3326 3759 4.640789 AGTACTACTCTCGCTCAAATGG 57.359 45.455 0.00 0.00 0.00 3.16
3327 3760 5.527951 TCCTAGTACTACTCTCGCTCAAATG 59.472 44.000 0.00 0.00 0.00 2.32
3328 3761 5.682659 TCCTAGTACTACTCTCGCTCAAAT 58.317 41.667 0.00 0.00 0.00 2.32
3329 3762 5.095145 TCCTAGTACTACTCTCGCTCAAA 57.905 43.478 0.00 0.00 0.00 2.69
3330 3763 4.750021 TCCTAGTACTACTCTCGCTCAA 57.250 45.455 0.00 0.00 0.00 3.02
3331 3764 4.503469 CCATCCTAGTACTACTCTCGCTCA 60.503 50.000 0.00 0.00 0.00 4.26
3332 3765 3.998341 CCATCCTAGTACTACTCTCGCTC 59.002 52.174 0.00 0.00 0.00 5.03
3333 3766 3.244630 CCCATCCTAGTACTACTCTCGCT 60.245 52.174 0.00 0.00 0.00 4.93
3334 3767 3.075884 CCCATCCTAGTACTACTCTCGC 58.924 54.545 0.00 0.00 0.00 5.03
3335 3768 4.066490 CACCCATCCTAGTACTACTCTCG 58.934 52.174 0.00 0.00 0.00 4.04
3336 3769 5.065235 GTCACCCATCCTAGTACTACTCTC 58.935 50.000 0.00 0.00 0.00 3.20
3337 3770 4.141205 GGTCACCCATCCTAGTACTACTCT 60.141 50.000 0.00 0.00 0.00 3.24
3338 3771 4.141205 AGGTCACCCATCCTAGTACTACTC 60.141 50.000 0.00 0.00 31.66 2.59
3339 3772 3.792684 AGGTCACCCATCCTAGTACTACT 59.207 47.826 0.00 0.00 31.66 2.57
3340 3773 4.143543 GAGGTCACCCATCCTAGTACTAC 58.856 52.174 0.00 0.00 33.83 2.73
3341 3774 3.139770 GGAGGTCACCCATCCTAGTACTA 59.860 52.174 1.89 1.89 33.83 1.82
3342 3775 2.091222 GGAGGTCACCCATCCTAGTACT 60.091 54.545 0.00 0.00 33.83 2.73
3343 3776 2.091222 AGGAGGTCACCCATCCTAGTAC 60.091 54.545 2.60 0.00 36.91 2.73
3344 3777 2.091278 CAGGAGGTCACCCATCCTAGTA 60.091 54.545 4.27 0.00 36.69 1.82
3345 3778 1.019650 AGGAGGTCACCCATCCTAGT 58.980 55.000 2.60 0.00 36.91 2.57
3346 3779 1.418334 CAGGAGGTCACCCATCCTAG 58.582 60.000 4.27 0.00 36.69 3.02
3347 3780 0.031111 CCAGGAGGTCACCCATCCTA 60.031 60.000 4.27 0.00 36.69 2.94
3348 3781 1.307343 CCAGGAGGTCACCCATCCT 60.307 63.158 0.00 0.00 38.30 3.24
3349 3782 3.324713 CCAGGAGGTCACCCATCC 58.675 66.667 0.00 0.00 0.00 3.51
3359 3792 1.296715 CCCTTTCACGACCAGGAGG 59.703 63.158 0.00 0.00 42.21 4.30
3360 3793 0.396811 AACCCTTTCACGACCAGGAG 59.603 55.000 0.00 0.00 0.00 3.69
3361 3794 0.841289 AAACCCTTTCACGACCAGGA 59.159 50.000 0.00 0.00 0.00 3.86
3362 3795 1.235724 GAAACCCTTTCACGACCAGG 58.764 55.000 0.00 0.00 39.45 4.45
3363 3796 1.961793 TGAAACCCTTTCACGACCAG 58.038 50.000 0.00 0.00 44.21 4.00
3371 3804 7.817478 CACAACCCTTAAATATGAAACCCTTTC 59.183 37.037 0.00 0.00 40.08 2.62
3372 3805 7.511028 TCACAACCCTTAAATATGAAACCCTTT 59.489 33.333 0.00 0.00 0.00 3.11
3373 3806 7.013834 TCACAACCCTTAAATATGAAACCCTT 58.986 34.615 0.00 0.00 0.00 3.95
3374 3807 6.557568 TCACAACCCTTAAATATGAAACCCT 58.442 36.000 0.00 0.00 0.00 4.34
3375 3808 6.844097 TCACAACCCTTAAATATGAAACCC 57.156 37.500 0.00 0.00 0.00 4.11
3376 3809 8.630037 CCTATCACAACCCTTAAATATGAAACC 58.370 37.037 0.00 0.00 0.00 3.27
3377 3810 8.135529 GCCTATCACAACCCTTAAATATGAAAC 58.864 37.037 0.00 0.00 0.00 2.78
3378 3811 8.058847 AGCCTATCACAACCCTTAAATATGAAA 58.941 33.333 0.00 0.00 0.00 2.69
3379 3812 7.582719 AGCCTATCACAACCCTTAAATATGAA 58.417 34.615 0.00 0.00 0.00 2.57
3380 3813 7.149202 AGCCTATCACAACCCTTAAATATGA 57.851 36.000 0.00 0.00 0.00 2.15
3381 3814 7.255590 CCAAGCCTATCACAACCCTTAAATATG 60.256 40.741 0.00 0.00 0.00 1.78
3382 3815 6.777580 CCAAGCCTATCACAACCCTTAAATAT 59.222 38.462 0.00 0.00 0.00 1.28
3383 3816 6.126409 CCAAGCCTATCACAACCCTTAAATA 58.874 40.000 0.00 0.00 0.00 1.40
3384 3817 4.956075 CCAAGCCTATCACAACCCTTAAAT 59.044 41.667 0.00 0.00 0.00 1.40
3385 3818 4.340617 CCAAGCCTATCACAACCCTTAAA 58.659 43.478 0.00 0.00 0.00 1.52
3386 3819 3.876156 GCCAAGCCTATCACAACCCTTAA 60.876 47.826 0.00 0.00 0.00 1.85
3387 3820 2.356741 GCCAAGCCTATCACAACCCTTA 60.357 50.000 0.00 0.00 0.00 2.69
3388 3821 1.616994 GCCAAGCCTATCACAACCCTT 60.617 52.381 0.00 0.00 0.00 3.95
3389 3822 0.034089 GCCAAGCCTATCACAACCCT 60.034 55.000 0.00 0.00 0.00 4.34
3390 3823 1.376609 CGCCAAGCCTATCACAACCC 61.377 60.000 0.00 0.00 0.00 4.11
3391 3824 0.392461 TCGCCAAGCCTATCACAACC 60.392 55.000 0.00 0.00 0.00 3.77
3392 3825 0.727398 GTCGCCAAGCCTATCACAAC 59.273 55.000 0.00 0.00 0.00 3.32
3393 3826 0.392461 GGTCGCCAAGCCTATCACAA 60.392 55.000 0.00 0.00 0.00 3.33
3394 3827 1.220749 GGTCGCCAAGCCTATCACA 59.779 57.895 0.00 0.00 0.00 3.58
3395 3828 0.392461 TTGGTCGCCAAGCCTATCAC 60.392 55.000 7.15 0.00 38.75 3.06
3396 3829 0.392461 GTTGGTCGCCAAGCCTATCA 60.392 55.000 10.94 0.00 44.82 2.15
3397 3830 1.429148 CGTTGGTCGCCAAGCCTATC 61.429 60.000 10.94 0.00 44.82 2.08
3398 3831 1.449601 CGTTGGTCGCCAAGCCTAT 60.450 57.895 10.94 0.00 44.82 2.57
3399 3832 1.534336 TACGTTGGTCGCCAAGCCTA 61.534 55.000 10.94 0.48 44.82 3.93
3400 3833 2.386064 TTACGTTGGTCGCCAAGCCT 62.386 55.000 10.94 1.26 44.82 4.58
3401 3834 1.508808 TTTACGTTGGTCGCCAAGCC 61.509 55.000 10.94 1.51 44.82 4.35
3402 3835 0.308376 TTTTACGTTGGTCGCCAAGC 59.692 50.000 10.94 6.41 44.82 4.01
3403 3836 2.032426 AGTTTTTACGTTGGTCGCCAAG 59.968 45.455 10.94 8.37 44.82 3.61
3404 3837 2.015587 AGTTTTTACGTTGGTCGCCAA 58.984 42.857 7.15 7.15 41.69 4.52
3405 3838 1.666054 AGTTTTTACGTTGGTCGCCA 58.334 45.000 0.00 0.00 44.19 5.69
3406 3839 2.411935 GCTAGTTTTTACGTTGGTCGCC 60.412 50.000 0.00 0.00 44.19 5.54
3407 3840 2.411935 GGCTAGTTTTTACGTTGGTCGC 60.412 50.000 0.00 0.00 44.19 5.19
3408 3841 2.801679 TGGCTAGTTTTTACGTTGGTCG 59.198 45.455 0.00 0.00 46.00 4.79
3409 3842 3.811497 ACTGGCTAGTTTTTACGTTGGTC 59.189 43.478 0.00 0.00 31.66 4.02
3410 3843 3.812262 ACTGGCTAGTTTTTACGTTGGT 58.188 40.909 0.00 0.00 31.66 3.67
3411 3844 4.514066 AGAACTGGCTAGTTTTTACGTTGG 59.486 41.667 17.25 0.00 46.79 3.77
3412 3845 5.668558 AGAACTGGCTAGTTTTTACGTTG 57.331 39.130 17.25 0.00 46.79 4.10
3413 3846 6.459161 CCAAAGAACTGGCTAGTTTTTACGTT 60.459 38.462 17.25 5.90 46.79 3.99
3414 3847 5.008316 CCAAAGAACTGGCTAGTTTTTACGT 59.992 40.000 17.25 0.20 46.79 3.57
3415 3848 5.449304 CCAAAGAACTGGCTAGTTTTTACG 58.551 41.667 17.25 11.60 46.79 3.18
3416 3849 5.301045 ACCCAAAGAACTGGCTAGTTTTTAC 59.699 40.000 17.25 4.13 46.79 2.01
3417 3850 5.451354 ACCCAAAGAACTGGCTAGTTTTTA 58.549 37.500 17.25 0.00 46.79 1.52
3418 3851 4.286707 ACCCAAAGAACTGGCTAGTTTTT 58.713 39.130 17.25 14.55 46.79 1.94
3419 3852 3.910989 ACCCAAAGAACTGGCTAGTTTT 58.089 40.909 17.25 8.65 46.79 2.43
3420 3853 3.595190 ACCCAAAGAACTGGCTAGTTT 57.405 42.857 17.25 4.53 46.79 2.66
3422 3855 3.054361 CCATACCCAAAGAACTGGCTAGT 60.054 47.826 0.00 0.00 39.32 2.57
3423 3856 3.199946 TCCATACCCAAAGAACTGGCTAG 59.800 47.826 0.00 0.00 34.88 3.42
3424 3857 3.186283 TCCATACCCAAAGAACTGGCTA 58.814 45.455 0.00 0.00 34.88 3.93
3425 3858 1.992557 TCCATACCCAAAGAACTGGCT 59.007 47.619 0.00 0.00 34.88 4.75
3426 3859 2.492088 GTTCCATACCCAAAGAACTGGC 59.508 50.000 0.00 0.00 36.52 4.85
3427 3860 3.089284 GGTTCCATACCCAAAGAACTGG 58.911 50.000 0.00 0.00 41.43 4.00
3448 3881 3.753294 ATACTACTCTCGCCCAAATGG 57.247 47.619 0.00 0.00 37.09 3.16
3449 3882 5.010719 TCCTAATACTACTCTCGCCCAAATG 59.989 44.000 0.00 0.00 0.00 2.32
3450 3883 5.145564 TCCTAATACTACTCTCGCCCAAAT 58.854 41.667 0.00 0.00 0.00 2.32
3451 3884 4.539726 TCCTAATACTACTCTCGCCCAAA 58.460 43.478 0.00 0.00 0.00 3.28
3452 3885 4.174704 TCCTAATACTACTCTCGCCCAA 57.825 45.455 0.00 0.00 0.00 4.12
3453 3886 3.870538 TCCTAATACTACTCTCGCCCA 57.129 47.619 0.00 0.00 0.00 5.36
3454 3887 3.444388 CCATCCTAATACTACTCTCGCCC 59.556 52.174 0.00 0.00 0.00 6.13
3455 3888 3.444388 CCCATCCTAATACTACTCTCGCC 59.556 52.174 0.00 0.00 0.00 5.54
3456 3889 4.080687 ACCCATCCTAATACTACTCTCGC 58.919 47.826 0.00 0.00 0.00 5.03
3457 3890 5.181622 GTCACCCATCCTAATACTACTCTCG 59.818 48.000 0.00 0.00 0.00 4.04
3458 3891 5.477637 GGTCACCCATCCTAATACTACTCTC 59.522 48.000 0.00 0.00 0.00 3.20
3459 3892 5.136392 AGGTCACCCATCCTAATACTACTCT 59.864 44.000 0.00 0.00 31.66 3.24
3460 3893 5.395611 AGGTCACCCATCCTAATACTACTC 58.604 45.833 0.00 0.00 31.66 2.59
3461 3894 5.395611 GAGGTCACCCATCCTAATACTACT 58.604 45.833 0.00 0.00 33.83 2.57
3462 3895 4.527427 GGAGGTCACCCATCCTAATACTAC 59.473 50.000 0.00 0.00 33.83 2.73
3463 3896 4.422592 AGGAGGTCACCCATCCTAATACTA 59.577 45.833 2.60 0.00 36.91 1.82
3464 3897 3.210074 AGGAGGTCACCCATCCTAATACT 59.790 47.826 2.60 0.00 36.91 2.12
3465 3898 3.325135 CAGGAGGTCACCCATCCTAATAC 59.675 52.174 4.27 0.00 36.69 1.89
3466 3899 3.587498 CAGGAGGTCACCCATCCTAATA 58.413 50.000 4.27 0.00 36.69 0.98
3467 3900 2.412591 CAGGAGGTCACCCATCCTAAT 58.587 52.381 4.27 0.00 36.69 1.73
3468 3901 1.625228 CCAGGAGGTCACCCATCCTAA 60.625 57.143 4.27 0.00 36.69 2.69
3469 3902 0.031111 CCAGGAGGTCACCCATCCTA 60.031 60.000 4.27 0.00 36.69 2.94
3470 3903 1.307343 CCAGGAGGTCACCCATCCT 60.307 63.158 0.00 0.00 38.30 3.24
3471 3904 2.378634 CCCAGGAGGTCACCCATCC 61.379 68.421 0.00 0.00 0.00 3.51
3472 3905 0.914417 TTCCCAGGAGGTCACCCATC 60.914 60.000 0.00 0.00 36.75 3.51
3473 3906 0.916358 CTTCCCAGGAGGTCACCCAT 60.916 60.000 0.00 0.00 36.75 4.00
3474 3907 1.538876 CTTCCCAGGAGGTCACCCA 60.539 63.158 0.00 0.00 36.75 4.51
3475 3908 1.539124 ACTTCCCAGGAGGTCACCC 60.539 63.158 0.00 0.00 36.75 4.61
3476 3909 1.984020 GACTTCCCAGGAGGTCACC 59.016 63.158 20.66 0.00 46.32 4.02
3480 3913 0.178929 ACGAAGACTTCCCAGGAGGT 60.179 55.000 9.63 0.31 37.15 3.85
3481 3914 0.247736 CACGAAGACTTCCCAGGAGG 59.752 60.000 9.63 0.00 0.00 4.30
3482 3915 1.257743 TCACGAAGACTTCCCAGGAG 58.742 55.000 9.63 0.00 0.00 3.69
3483 3916 1.712056 TTCACGAAGACTTCCCAGGA 58.288 50.000 9.63 0.00 0.00 3.86
3484 3917 2.417719 CTTTCACGAAGACTTCCCAGG 58.582 52.381 9.63 0.00 37.57 4.45
3485 3918 2.417719 CCTTTCACGAAGACTTCCCAG 58.582 52.381 9.63 0.00 37.57 4.45
3486 3919 1.071699 CCCTTTCACGAAGACTTCCCA 59.928 52.381 9.63 0.00 37.57 4.37
3487 3920 1.071857 ACCCTTTCACGAAGACTTCCC 59.928 52.381 9.63 0.00 37.57 3.97
3488 3921 2.545537 ACCCTTTCACGAAGACTTCC 57.454 50.000 9.63 0.00 37.57 3.46
3489 3922 3.875134 TGAAACCCTTTCACGAAGACTTC 59.125 43.478 5.03 5.03 44.21 3.01
3490 3923 3.881220 TGAAACCCTTTCACGAAGACTT 58.119 40.909 0.00 0.00 44.21 3.01
3491 3924 3.553828 TGAAACCCTTTCACGAAGACT 57.446 42.857 0.00 0.00 44.21 3.24
3500 3933 6.231951 GGTAGGCTAGATATGAAACCCTTTC 58.768 44.000 0.00 0.00 40.08 2.62
3501 3934 5.073280 GGGTAGGCTAGATATGAAACCCTTT 59.927 44.000 8.73 0.00 41.75 3.11
3502 3935 4.597940 GGGTAGGCTAGATATGAAACCCTT 59.402 45.833 8.73 0.00 41.75 3.95
3503 3936 4.168883 GGGTAGGCTAGATATGAAACCCT 58.831 47.826 8.73 0.00 41.75 4.34
3504 3937 3.263681 GGGGTAGGCTAGATATGAAACCC 59.736 52.174 7.65 7.65 43.82 4.11
3505 3938 3.908103 TGGGGTAGGCTAGATATGAAACC 59.092 47.826 0.00 0.00 0.00 3.27
3506 3939 5.071923 AGTTGGGGTAGGCTAGATATGAAAC 59.928 44.000 0.00 0.00 0.00 2.78
3507 3940 5.224441 AGTTGGGGTAGGCTAGATATGAAA 58.776 41.667 0.00 0.00 0.00 2.69
3508 3941 4.827789 AGTTGGGGTAGGCTAGATATGAA 58.172 43.478 0.00 0.00 0.00 2.57
3509 3942 4.487282 AGTTGGGGTAGGCTAGATATGA 57.513 45.455 0.00 0.00 0.00 2.15
3510 3943 4.348168 ACAAGTTGGGGTAGGCTAGATATG 59.652 45.833 7.96 0.00 0.00 1.78
3511 3944 4.567857 ACAAGTTGGGGTAGGCTAGATAT 58.432 43.478 7.96 0.00 0.00 1.63
3512 3945 4.003584 ACAAGTTGGGGTAGGCTAGATA 57.996 45.455 7.96 0.00 0.00 1.98
3513 3946 2.846950 ACAAGTTGGGGTAGGCTAGAT 58.153 47.619 7.96 0.00 0.00 1.98
3514 3947 2.337359 ACAAGTTGGGGTAGGCTAGA 57.663 50.000 7.96 0.00 0.00 2.43
3515 3948 3.081804 CAAACAAGTTGGGGTAGGCTAG 58.918 50.000 7.96 0.00 33.18 3.42
3516 3949 3.149005 CAAACAAGTTGGGGTAGGCTA 57.851 47.619 7.96 0.00 33.18 3.93
3517 3950 1.995376 CAAACAAGTTGGGGTAGGCT 58.005 50.000 7.96 0.00 33.18 4.58
3526 3959 5.213891 AGCCTTTTATCCCAAACAAGTTG 57.786 39.130 0.00 0.00 36.94 3.16
3527 3960 5.508994 CGAAGCCTTTTATCCCAAACAAGTT 60.509 40.000 0.00 0.00 0.00 2.66
3528 3961 4.022329 CGAAGCCTTTTATCCCAAACAAGT 60.022 41.667 0.00 0.00 0.00 3.16
3529 3962 4.022329 ACGAAGCCTTTTATCCCAAACAAG 60.022 41.667 0.00 0.00 0.00 3.16
3530 3963 3.892588 ACGAAGCCTTTTATCCCAAACAA 59.107 39.130 0.00 0.00 0.00 2.83
3531 3964 3.492337 ACGAAGCCTTTTATCCCAAACA 58.508 40.909 0.00 0.00 0.00 2.83
3532 3965 5.182570 ACTTACGAAGCCTTTTATCCCAAAC 59.817 40.000 0.00 0.00 0.00 2.93
3533 3966 5.318630 ACTTACGAAGCCTTTTATCCCAAA 58.681 37.500 0.00 0.00 0.00 3.28
3534 3967 4.913784 ACTTACGAAGCCTTTTATCCCAA 58.086 39.130 0.00 0.00 0.00 4.12
3535 3968 4.563140 ACTTACGAAGCCTTTTATCCCA 57.437 40.909 0.00 0.00 0.00 4.37
3536 3969 6.111382 ACTTACTTACGAAGCCTTTTATCCC 58.889 40.000 0.00 0.00 0.00 3.85
3537 3970 8.762426 CATACTTACTTACGAAGCCTTTTATCC 58.238 37.037 0.00 0.00 0.00 2.59
3538 3971 8.762426 CCATACTTACTTACGAAGCCTTTTATC 58.238 37.037 0.00 0.00 0.00 1.75
3539 3972 8.480501 TCCATACTTACTTACGAAGCCTTTTAT 58.519 33.333 0.00 0.00 0.00 1.40
3540 3973 7.839907 TCCATACTTACTTACGAAGCCTTTTA 58.160 34.615 0.00 0.00 0.00 1.52
3541 3974 6.704310 TCCATACTTACTTACGAAGCCTTTT 58.296 36.000 0.00 0.00 0.00 2.27
3542 3975 6.290294 TCCATACTTACTTACGAAGCCTTT 57.710 37.500 0.00 0.00 0.00 3.11
3543 3976 5.927281 TCCATACTTACTTACGAAGCCTT 57.073 39.130 0.00 0.00 0.00 4.35
3544 3977 6.208994 CCTATCCATACTTACTTACGAAGCCT 59.791 42.308 0.00 0.00 0.00 4.58
3545 3978 6.015603 ACCTATCCATACTTACTTACGAAGCC 60.016 42.308 0.00 0.00 0.00 4.35
3546 3979 6.979465 ACCTATCCATACTTACTTACGAAGC 58.021 40.000 0.00 0.00 0.00 3.86
3557 3990 8.871125 CAGGAGTACATTTACCTATCCATACTT 58.129 37.037 0.00 0.00 0.00 2.24
3558 3991 8.011290 ACAGGAGTACATTTACCTATCCATACT 58.989 37.037 0.00 0.00 0.00 2.12
3559 3992 8.191534 ACAGGAGTACATTTACCTATCCATAC 57.808 38.462 0.00 0.00 0.00 2.39
3629 4066 1.020861 TCGCATCGCAGCACTGATTT 61.021 50.000 0.81 0.00 0.00 2.17
3653 4090 6.238538 GGTCAGCTAGAGAATACAGTGTACTC 60.239 46.154 4.80 4.11 0.00 2.59
3733 4171 4.069304 TGGGACACGTAATTTTCTCCAAG 58.931 43.478 0.00 0.00 0.00 3.61
3746 4184 2.861462 CAAACATGTTTGGGACACGT 57.139 45.000 34.07 5.68 44.47 4.49
3774 4214 9.862149 AACCAACTTAAAAGATAGGAGAAGAAA 57.138 29.630 0.00 0.00 0.00 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.