Multiple sequence alignment - TraesCS5D01G223300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G223300 chr5D 100.000 4129 0 0 463 4591 331213485 331209357 0.000000e+00 7625.0
1 TraesCS5D01G223300 chr5D 97.634 1479 33 1 1699 3175 381783324 381781846 0.000000e+00 2536.0
2 TraesCS5D01G223300 chr5D 100.000 198 0 0 1 198 331213947 331213750 2.610000e-97 366.0
3 TraesCS5D01G223300 chr5D 76.812 207 19 19 4412 4591 237466015 237466219 6.330000e-14 89.8
4 TraesCS5D01G223300 chr5D 100.000 32 0 0 3636 3667 324078656 324078625 4.960000e-05 60.2
5 TraesCS5D01G223300 chr7D 97.967 1525 27 2 1701 3222 83376838 83375315 0.000000e+00 2641.0
6 TraesCS5D01G223300 chr7D 95.913 1517 34 3 1702 3218 638353892 638352404 0.000000e+00 2433.0
7 TraesCS5D01G223300 chr7D 97.755 1158 24 2 1700 2857 492146360 492145205 0.000000e+00 1993.0
8 TraesCS5D01G223300 chr7D 87.121 132 16 1 56 186 509064255 509064386 1.030000e-31 148.0
9 TraesCS5D01G223300 chr7D 82.738 168 22 6 26 189 25075371 25075535 4.790000e-30 143.0
10 TraesCS5D01G223300 chr7D 100.000 39 0 0 4293 4331 545261410 545261372 6.370000e-09 73.1
11 TraesCS5D01G223300 chr7D 97.368 38 1 0 4292 4329 117582304 117582267 1.070000e-06 65.8
12 TraesCS5D01G223300 chr3D 97.782 1533 33 1 1690 3222 438262460 438263991 0.000000e+00 2641.0
13 TraesCS5D01G223300 chr5A 93.886 1521 83 6 1702 3219 377927998 377929511 0.000000e+00 2285.0
14 TraesCS5D01G223300 chr5A 91.815 1515 120 4 1702 3215 11691691 11690180 0.000000e+00 2108.0
15 TraesCS5D01G223300 chr5A 92.679 1243 53 16 463 1695 431745191 431743977 0.000000e+00 1757.0
16 TraesCS5D01G223300 chr5A 93.692 539 29 2 3639 4177 431743565 431743032 0.000000e+00 802.0
17 TraesCS5D01G223300 chr5A 94.503 382 18 3 3255 3634 431743992 431743612 1.840000e-163 586.0
18 TraesCS5D01G223300 chr6D 95.635 1283 52 2 1702 2984 42534214 42535492 0.000000e+00 2056.0
19 TraesCS5D01G223300 chr6D 79.026 267 37 13 4343 4591 139585545 139585810 1.020000e-36 165.0
20 TraesCS5D01G223300 chr1A 90.367 1526 128 10 1703 3216 589992097 589993615 0.000000e+00 1986.0
21 TraesCS5D01G223300 chr1A 95.410 610 23 2 2550 3159 93391547 93392151 0.000000e+00 966.0
22 TraesCS5D01G223300 chr1A 97.674 43 1 0 4292 4334 524283011 524282969 1.770000e-09 75.0
23 TraesCS5D01G223300 chr1A 97.674 43 1 0 4292 4334 526584172 526584130 1.770000e-09 75.0
24 TraesCS5D01G223300 chr1A 100.000 32 0 0 3636 3667 50963557 50963526 4.960000e-05 60.2
25 TraesCS5D01G223300 chr5B 95.401 1022 31 7 675 1695 386665935 386664929 0.000000e+00 1613.0
26 TraesCS5D01G223300 chr5B 92.023 702 35 8 936 1619 655049882 655049184 0.000000e+00 966.0
27 TraesCS5D01G223300 chr5B 92.023 702 35 8 936 1619 655051820 655051122 0.000000e+00 966.0
28 TraesCS5D01G223300 chr5B 95.628 366 14 2 3255 3619 386664944 386664580 1.840000e-163 586.0
29 TraesCS5D01G223300 chr5B 89.418 378 14 7 463 833 655053202 655052844 1.950000e-123 453.0
30 TraesCS5D01G223300 chr5B 90.000 160 9 3 463 620 386666099 386665945 2.800000e-47 200.0
31 TraesCS5D01G223300 chr5B 89.865 148 13 2 3275 3421 655049157 655049011 6.060000e-44 189.0
32 TraesCS5D01G223300 chr5B 95.575 113 4 1 826 938 655050274 655050163 3.650000e-41 180.0
33 TraesCS5D01G223300 chr5B 95.575 113 4 1 826 938 655052212 655052101 3.650000e-41 180.0
34 TraesCS5D01G223300 chr5B 97.500 80 2 0 3420 3499 655048965 655048886 2.230000e-28 137.0
35 TraesCS5D01G223300 chr5B 88.060 67 8 0 4412 4478 421591327 421591393 3.810000e-11 80.5
36 TraesCS5D01G223300 chrUn 92.023 702 35 8 936 1619 284668402 284667704 0.000000e+00 966.0
37 TraesCS5D01G223300 chrUn 92.023 702 35 8 936 1619 290414308 290413610 0.000000e+00 966.0
38 TraesCS5D01G223300 chrUn 92.023 702 35 8 936 1619 296426156 296426854 0.000000e+00 966.0
39 TraesCS5D01G223300 chrUn 92.023 702 35 8 936 1619 319986385 319987083 0.000000e+00 966.0
40 TraesCS5D01G223300 chrUn 90.133 375 14 5 463 833 296424777 296425132 2.500000e-127 466.0
41 TraesCS5D01G223300 chrUn 89.418 378 14 7 463 833 284669784 284669426 1.950000e-123 453.0
42 TraesCS5D01G223300 chrUn 89.418 378 14 7 463 833 290415690 290415332 1.950000e-123 453.0
43 TraesCS5D01G223300 chrUn 89.865 148 13 2 3275 3421 319987110 319987256 6.060000e-44 189.0
44 TraesCS5D01G223300 chrUn 95.575 113 4 1 826 938 284668794 284668683 3.650000e-41 180.0
45 TraesCS5D01G223300 chrUn 95.575 113 4 1 826 938 290414700 290414589 3.650000e-41 180.0
46 TraesCS5D01G223300 chrUn 95.575 113 4 1 826 938 296425764 296425875 3.650000e-41 180.0
47 TraesCS5D01G223300 chrUn 95.575 113 4 1 826 938 319985993 319986104 3.650000e-41 180.0
48 TraesCS5D01G223300 chrUn 96.250 80 3 0 3420 3499 319987302 319987381 1.040000e-26 132.0
49 TraesCS5D01G223300 chr6B 91.515 495 41 1 2723 3217 514104106 514103613 0.000000e+00 680.0
50 TraesCS5D01G223300 chr2B 87.179 117 13 2 74 189 692853350 692853235 1.040000e-26 132.0
51 TraesCS5D01G223300 chr2B 80.682 176 25 9 26 195 692892631 692892459 1.340000e-25 128.0
52 TraesCS5D01G223300 chr2B 88.542 96 9 2 95 189 692785382 692785288 1.040000e-21 115.0
53 TraesCS5D01G223300 chr2B 94.231 52 2 1 4283 4333 24815970 24815919 1.370000e-10 78.7
54 TraesCS5D01G223300 chr2B 79.817 109 18 4 4411 4516 794091235 794091128 4.930000e-10 76.8
55 TraesCS5D01G223300 chr2B 97.143 35 0 1 3636 3669 676288758 676288792 1.780000e-04 58.4
56 TraesCS5D01G223300 chr7A 78.771 179 28 7 4366 4536 641446681 641446505 1.350000e-20 111.0
57 TraesCS5D01G223300 chr7A 97.674 43 0 1 4292 4334 589451069 589451110 6.370000e-09 73.1
58 TraesCS5D01G223300 chr7A 95.455 44 2 0 4291 4334 634474741 634474784 2.290000e-08 71.3
59 TraesCS5D01G223300 chr3A 97.727 44 1 0 4289 4332 22802890 22802933 4.930000e-10 76.8
60 TraesCS5D01G223300 chr7B 95.455 44 2 0 4291 4334 7285289 7285246 2.290000e-08 71.3
61 TraesCS5D01G223300 chr6A 77.600 125 22 5 3879 3999 7349700 7349822 2.290000e-08 71.3
62 TraesCS5D01G223300 chr3B 100.000 32 0 0 3636 3667 401581443 401581412 4.960000e-05 60.2
63 TraesCS5D01G223300 chr4B 97.143 35 0 1 3636 3669 456727118 456727084 1.780000e-04 58.4
64 TraesCS5D01G223300 chr1B 97.143 35 0 1 3636 3669 555255382 555255348 1.780000e-04 58.4
65 TraesCS5D01G223300 chr1B 97.143 35 0 1 3636 3669 595843051 595843017 1.780000e-04 58.4
66 TraesCS5D01G223300 chr1B 97.143 35 0 1 3636 3669 595894341 595894307 1.780000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G223300 chr5D 331209357 331213947 4590 True 3995.500000 7625 100.000000 1 4591 2 chr5D.!!$R3 4590
1 TraesCS5D01G223300 chr5D 381781846 381783324 1478 True 2536.000000 2536 97.634000 1699 3175 1 chr5D.!!$R2 1476
2 TraesCS5D01G223300 chr7D 83375315 83376838 1523 True 2641.000000 2641 97.967000 1701 3222 1 chr7D.!!$R1 1521
3 TraesCS5D01G223300 chr7D 638352404 638353892 1488 True 2433.000000 2433 95.913000 1702 3218 1 chr7D.!!$R5 1516
4 TraesCS5D01G223300 chr7D 492145205 492146360 1155 True 1993.000000 1993 97.755000 1700 2857 1 chr7D.!!$R3 1157
5 TraesCS5D01G223300 chr3D 438262460 438263991 1531 False 2641.000000 2641 97.782000 1690 3222 1 chr3D.!!$F1 1532
6 TraesCS5D01G223300 chr5A 377927998 377929511 1513 False 2285.000000 2285 93.886000 1702 3219 1 chr5A.!!$F1 1517
7 TraesCS5D01G223300 chr5A 11690180 11691691 1511 True 2108.000000 2108 91.815000 1702 3215 1 chr5A.!!$R1 1513
8 TraesCS5D01G223300 chr5A 431743032 431745191 2159 True 1048.333333 1757 93.624667 463 4177 3 chr5A.!!$R2 3714
9 TraesCS5D01G223300 chr6D 42534214 42535492 1278 False 2056.000000 2056 95.635000 1702 2984 1 chr6D.!!$F1 1282
10 TraesCS5D01G223300 chr1A 589992097 589993615 1518 False 1986.000000 1986 90.367000 1703 3216 1 chr1A.!!$F2 1513
11 TraesCS5D01G223300 chr1A 93391547 93392151 604 False 966.000000 966 95.410000 2550 3159 1 chr1A.!!$F1 609
12 TraesCS5D01G223300 chr5B 386664580 386666099 1519 True 799.666667 1613 93.676333 463 3619 3 chr5B.!!$R1 3156
13 TraesCS5D01G223300 chr5B 655048886 655053202 4316 True 438.714286 966 93.139857 463 3499 7 chr5B.!!$R2 3036
14 TraesCS5D01G223300 chrUn 296424777 296426854 2077 False 537.333333 966 92.577000 463 1619 3 chrUn.!!$F1 1156
15 TraesCS5D01G223300 chrUn 284667704 284669784 2080 True 533.000000 966 92.338667 463 1619 3 chrUn.!!$R1 1156
16 TraesCS5D01G223300 chrUn 290413610 290415690 2080 True 533.000000 966 92.338667 463 1619 3 chrUn.!!$R2 1156
17 TraesCS5D01G223300 chrUn 319985993 319987381 1388 False 366.750000 966 93.428250 826 3499 4 chrUn.!!$F2 2673

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
176 177 0.737715 CAAGAGGGCGAAACCGAGAG 60.738 60.000 0.00 0.0 40.62 3.20 F
666 672 2.365408 GGAGAAACCGAACGTGATCT 57.635 50.000 0.00 0.0 0.00 2.75 F
2292 5192 2.203294 AAGCGCCAACCGAACCTT 60.203 55.556 2.29 0.0 40.02 3.50 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1086 2048 0.034670 ATTTGGCAGAGTGAGGAGGC 60.035 55.0 0.00 0.00 0.00 4.70 R
2428 5328 0.460109 CCATCTTGATGGCGTCGTCA 60.460 55.0 8.09 8.09 37.15 4.35 R
4186 7215 0.032017 ACCACTTAGGATCTCCGCCT 60.032 55.0 0.00 0.00 41.22 5.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 9.998106 ATATATCTATATACAACCCAAATCCGC 57.002 33.333 0.00 0.00 0.00 5.54
36 37 4.562082 TCTATATACAACCCAAATCCGCG 58.438 43.478 0.00 0.00 0.00 6.46
37 38 1.301423 TATACAACCCAAATCCGCGC 58.699 50.000 0.00 0.00 0.00 6.86
38 39 1.381165 ATACAACCCAAATCCGCGCC 61.381 55.000 0.00 0.00 0.00 6.53
39 40 2.472414 TACAACCCAAATCCGCGCCT 62.472 55.000 0.00 0.00 0.00 5.52
40 41 2.750237 AACCCAAATCCGCGCCTC 60.750 61.111 0.00 0.00 0.00 4.70
41 42 4.796495 ACCCAAATCCGCGCCTCC 62.796 66.667 0.00 0.00 0.00 4.30
99 100 2.887568 CGCACCTCCGCTAGCTTG 60.888 66.667 13.93 3.85 0.00 4.01
100 101 3.198489 GCACCTCCGCTAGCTTGC 61.198 66.667 13.93 10.33 0.00 4.01
101 102 2.512515 CACCTCCGCTAGCTTGCC 60.513 66.667 14.61 0.00 0.00 4.52
102 103 4.148825 ACCTCCGCTAGCTTGCCG 62.149 66.667 14.61 8.32 0.00 5.69
122 123 3.657350 CCGTCCCCAACACCCCAT 61.657 66.667 0.00 0.00 0.00 4.00
123 124 2.361104 CGTCCCCAACACCCCATG 60.361 66.667 0.00 0.00 0.00 3.66
124 125 2.679996 GTCCCCAACACCCCATGC 60.680 66.667 0.00 0.00 0.00 4.06
125 126 3.188903 TCCCCAACACCCCATGCA 61.189 61.111 0.00 0.00 0.00 3.96
126 127 2.681064 CCCCAACACCCCATGCAG 60.681 66.667 0.00 0.00 0.00 4.41
127 128 2.440147 CCCAACACCCCATGCAGA 59.560 61.111 0.00 0.00 0.00 4.26
128 129 1.978617 CCCAACACCCCATGCAGAC 60.979 63.158 0.00 0.00 0.00 3.51
129 130 1.228521 CCAACACCCCATGCAGACA 60.229 57.895 0.00 0.00 0.00 3.41
130 131 1.526575 CCAACACCCCATGCAGACAC 61.527 60.000 0.00 0.00 0.00 3.67
131 132 1.600636 AACACCCCATGCAGACACG 60.601 57.895 0.00 0.00 0.00 4.49
132 133 2.050836 AACACCCCATGCAGACACGA 62.051 55.000 0.00 0.00 0.00 4.35
133 134 1.742880 CACCCCATGCAGACACGAG 60.743 63.158 0.00 0.00 0.00 4.18
134 135 2.821366 CCCCATGCAGACACGAGC 60.821 66.667 0.00 0.00 0.00 5.03
135 136 2.267006 CCCATGCAGACACGAGCT 59.733 61.111 0.00 0.00 0.00 4.09
136 137 1.812922 CCCATGCAGACACGAGCTC 60.813 63.158 2.73 2.73 0.00 4.09
137 138 1.812922 CCATGCAGACACGAGCTCC 60.813 63.158 8.47 0.00 0.00 4.70
138 139 1.812922 CATGCAGACACGAGCTCCC 60.813 63.158 8.47 0.00 0.00 4.30
139 140 3.023949 ATGCAGACACGAGCTCCCC 62.024 63.158 8.47 0.00 0.00 4.81
140 141 4.803426 GCAGACACGAGCTCCCCG 62.803 72.222 8.47 0.00 0.00 5.73
141 142 4.803426 CAGACACGAGCTCCCCGC 62.803 72.222 8.47 0.00 39.57 6.13
162 163 3.123620 GCCCGAGCTGCACAAGAG 61.124 66.667 1.02 0.00 35.50 2.85
163 164 2.435586 CCCGAGCTGCACAAGAGG 60.436 66.667 1.02 0.00 0.00 3.69
164 165 2.435586 CCGAGCTGCACAAGAGGG 60.436 66.667 1.02 0.00 0.00 4.30
165 166 3.123620 CGAGCTGCACAAGAGGGC 61.124 66.667 1.02 0.00 0.00 5.19
166 167 3.123620 GAGCTGCACAAGAGGGCG 61.124 66.667 1.02 0.00 0.00 6.13
167 168 3.596066 GAGCTGCACAAGAGGGCGA 62.596 63.158 1.02 0.00 0.00 5.54
168 169 2.669569 GCTGCACAAGAGGGCGAA 60.670 61.111 0.00 0.00 0.00 4.70
169 170 2.260869 GCTGCACAAGAGGGCGAAA 61.261 57.895 0.00 0.00 0.00 3.46
170 171 1.576421 CTGCACAAGAGGGCGAAAC 59.424 57.895 0.00 0.00 0.00 2.78
171 172 1.856265 CTGCACAAGAGGGCGAAACC 61.856 60.000 0.00 0.00 37.93 3.27
172 173 2.966309 GCACAAGAGGGCGAAACCG 61.966 63.158 0.00 0.00 40.62 4.44
173 174 1.301401 CACAAGAGGGCGAAACCGA 60.301 57.895 0.00 0.00 40.62 4.69
174 175 1.004918 ACAAGAGGGCGAAACCGAG 60.005 57.895 0.00 0.00 40.62 4.63
175 176 1.292223 CAAGAGGGCGAAACCGAGA 59.708 57.895 0.00 0.00 40.62 4.04
176 177 0.737715 CAAGAGGGCGAAACCGAGAG 60.738 60.000 0.00 0.00 40.62 3.20
536 538 6.202379 GCTTTTAGTCTACTTCGGTTCTGTTT 59.798 38.462 0.00 0.00 0.00 2.83
560 562 4.996344 GTTAAAACCAAACCAAGAACCGA 58.004 39.130 0.00 0.00 0.00 4.69
666 672 2.365408 GGAGAAACCGAACGTGATCT 57.635 50.000 0.00 0.00 0.00 2.75
758 769 3.264866 GAGTAGTATCCGGCCGCGG 62.265 68.421 24.05 24.05 0.00 6.46
791 816 3.099905 CCAGTCACCTCTCCAAGTGATA 58.900 50.000 0.00 0.00 44.34 2.15
805 830 5.070981 TCCAAGTGATATCCATCTTCTCCAC 59.929 44.000 0.00 0.00 31.93 4.02
1144 2106 2.440247 TCGCGCTGATCCTCCTCA 60.440 61.111 5.56 0.00 0.00 3.86
1155 2117 2.725008 CTCCTCATCCTCGTCGCC 59.275 66.667 0.00 0.00 0.00 5.54
1256 2218 4.570663 CCTCCGGCCGTCGTCATC 62.571 72.222 26.12 0.00 37.11 2.92
1320 2282 3.649986 GTGGCGTCGCTGCTGTTT 61.650 61.111 18.11 0.00 34.52 2.83
1615 2586 6.363357 GCCAAAGTTTCATGTATGTTCAGAAC 59.637 38.462 6.32 6.32 0.00 3.01
1619 2590 8.450578 AAGTTTCATGTATGTTCAGAACTTCA 57.549 30.769 14.51 10.51 0.00 3.02
1620 2591 8.092521 AGTTTCATGTATGTTCAGAACTTCAG 57.907 34.615 14.51 0.73 0.00 3.02
1664 4541 9.620660 TCTTCAGAAGTTCTTTTGTTGTTTTAC 57.379 29.630 10.09 0.00 0.00 2.01
1688 4585 8.926092 ACTGTAGTATATGCTATCACTCTTCA 57.074 34.615 3.71 0.00 0.00 3.02
1689 4586 9.008965 ACTGTAGTATATGCTATCACTCTTCAG 57.991 37.037 3.71 6.56 0.00 3.02
1690 4587 9.225436 CTGTAGTATATGCTATCACTCTTCAGA 57.775 37.037 3.71 0.00 0.00 3.27
1691 4588 9.574516 TGTAGTATATGCTATCACTCTTCAGAA 57.425 33.333 3.71 0.00 0.00 3.02
1724 4621 3.731652 TTTTACGGAACCTCGTCAGAA 57.268 42.857 0.00 0.00 42.82 3.02
1959 4859 4.884257 ACACGCGAGCCACAACGT 62.884 61.111 15.93 0.00 39.78 3.99
2003 4903 2.354259 CCCTTACTACACGAGACGACT 58.646 52.381 0.00 0.00 0.00 4.18
2017 4917 4.314440 GACTGCCCGCAGACCACA 62.314 66.667 22.97 0.00 46.30 4.17
2065 4965 2.370445 CCCCGACTTCCAGCCAGAT 61.370 63.158 0.00 0.00 0.00 2.90
2292 5192 2.203294 AAGCGCCAACCGAACCTT 60.203 55.556 2.29 0.00 40.02 3.50
2505 5405 1.202604 TCGAGTCGGGCAGAAACTTTT 60.203 47.619 13.54 0.00 0.00 2.27
3225 6163 4.664677 ACGCGAGCGAGCTGGTTT 62.665 61.111 24.72 0.00 42.83 3.27
3226 6164 2.506217 CGCGAGCGAGCTGGTTTA 60.506 61.111 12.58 0.00 42.83 2.01
3227 6165 2.789203 CGCGAGCGAGCTGGTTTAC 61.789 63.158 12.58 0.00 42.83 2.01
3228 6166 1.736645 GCGAGCGAGCTGGTTTACA 60.737 57.895 0.84 0.00 0.00 2.41
3242 6180 6.801539 CTGGTTTACAGTTCATAGCTTCAA 57.198 37.500 0.00 0.00 42.42 2.69
3243 6181 7.202016 CTGGTTTACAGTTCATAGCTTCAAA 57.798 36.000 0.00 0.00 42.42 2.69
3244 6182 7.202016 TGGTTTACAGTTCATAGCTTCAAAG 57.798 36.000 0.00 0.00 0.00 2.77
3245 6183 6.770785 TGGTTTACAGTTCATAGCTTCAAAGT 59.229 34.615 0.00 0.00 0.00 2.66
3246 6184 7.934665 TGGTTTACAGTTCATAGCTTCAAAGTA 59.065 33.333 0.00 0.00 0.00 2.24
3247 6185 8.947115 GGTTTACAGTTCATAGCTTCAAAGTAT 58.053 33.333 0.00 0.00 0.00 2.12
3248 6186 9.974750 GTTTACAGTTCATAGCTTCAAAGTATC 57.025 33.333 0.00 0.00 0.00 2.24
3249 6187 8.718102 TTACAGTTCATAGCTTCAAAGTATCC 57.282 34.615 0.00 0.00 0.00 2.59
3250 6188 6.116126 ACAGTTCATAGCTTCAAAGTATCCC 58.884 40.000 0.00 0.00 0.00 3.85
3251 6189 6.115446 CAGTTCATAGCTTCAAAGTATCCCA 58.885 40.000 0.00 0.00 0.00 4.37
3252 6190 6.599244 CAGTTCATAGCTTCAAAGTATCCCAA 59.401 38.462 0.00 0.00 0.00 4.12
3253 6191 7.284034 CAGTTCATAGCTTCAAAGTATCCCAAT 59.716 37.037 0.00 0.00 0.00 3.16
3254 6192 7.836183 AGTTCATAGCTTCAAAGTATCCCAATT 59.164 33.333 0.00 0.00 0.00 2.32
3255 6193 7.807977 TCATAGCTTCAAAGTATCCCAATTC 57.192 36.000 0.00 0.00 0.00 2.17
3256 6194 7.345691 TCATAGCTTCAAAGTATCCCAATTCA 58.654 34.615 0.00 0.00 0.00 2.57
3257 6195 5.904362 AGCTTCAAAGTATCCCAATTCAC 57.096 39.130 0.00 0.00 0.00 3.18
3258 6196 5.574188 AGCTTCAAAGTATCCCAATTCACT 58.426 37.500 0.00 0.00 0.00 3.41
3259 6197 5.649831 AGCTTCAAAGTATCCCAATTCACTC 59.350 40.000 0.00 0.00 0.00 3.51
3260 6198 5.649831 GCTTCAAAGTATCCCAATTCACTCT 59.350 40.000 0.00 0.00 0.00 3.24
3261 6199 6.151817 GCTTCAAAGTATCCCAATTCACTCTT 59.848 38.462 0.00 0.00 0.00 2.85
3262 6200 7.627300 GCTTCAAAGTATCCCAATTCACTCTTC 60.627 40.741 0.00 0.00 0.00 2.87
3263 6201 6.778821 TCAAAGTATCCCAATTCACTCTTCA 58.221 36.000 0.00 0.00 0.00 3.02
3264 6202 6.881065 TCAAAGTATCCCAATTCACTCTTCAG 59.119 38.462 0.00 0.00 0.00 3.02
3265 6203 6.627087 AAGTATCCCAATTCACTCTTCAGA 57.373 37.500 0.00 0.00 0.00 3.27
3266 6204 6.627087 AGTATCCCAATTCACTCTTCAGAA 57.373 37.500 0.00 0.00 0.00 3.02
3267 6205 6.648192 AGTATCCCAATTCACTCTTCAGAAG 58.352 40.000 3.45 3.45 0.00 2.85
3268 6206 4.982241 TCCCAATTCACTCTTCAGAAGT 57.018 40.909 10.09 0.00 0.00 3.01
3269 6207 5.310409 TCCCAATTCACTCTTCAGAAGTT 57.690 39.130 10.09 0.00 0.00 2.66
3270 6208 5.308825 TCCCAATTCACTCTTCAGAAGTTC 58.691 41.667 10.09 0.00 0.00 3.01
3271 6209 5.065914 CCCAATTCACTCTTCAGAAGTTCA 58.934 41.667 10.09 0.00 0.00 3.18
3272 6210 5.532406 CCCAATTCACTCTTCAGAAGTTCAA 59.468 40.000 10.09 0.50 0.00 2.69
3273 6211 6.039717 CCCAATTCACTCTTCAGAAGTTCAAA 59.960 38.462 10.09 2.40 0.00 2.69
3274 6212 7.255730 CCCAATTCACTCTTCAGAAGTTCAAAT 60.256 37.037 10.09 4.43 0.00 2.32
3275 6213 7.806960 CCAATTCACTCTTCAGAAGTTCAAATC 59.193 37.037 10.09 0.00 0.00 2.17
3276 6214 8.566260 CAATTCACTCTTCAGAAGTTCAAATCT 58.434 33.333 10.09 0.00 0.00 2.40
3277 6215 8.688747 ATTCACTCTTCAGAAGTTCAAATCTT 57.311 30.769 10.09 0.00 0.00 2.40
3278 6216 7.721286 TCACTCTTCAGAAGTTCAAATCTTC 57.279 36.000 10.09 0.00 40.83 2.87
3279 6217 7.275183 TCACTCTTCAGAAGTTCAAATCTTCA 58.725 34.615 10.09 0.00 42.35 3.02
3291 6229 6.484977 AGTTCAAATCTTCAGGAAGTTCAGTC 59.515 38.462 5.01 0.00 39.38 3.51
3310 6248 3.746492 AGTCTGTCTAAATTTCGTGGTGC 59.254 43.478 0.00 0.00 0.00 5.01
3315 6254 4.148891 GTCTAAATTTCGTGGTGCTTTCG 58.851 43.478 0.00 0.00 0.00 3.46
3327 6266 3.316588 TGGTGCTTTCGATTGCAGTTTAA 59.683 39.130 12.20 0.00 40.06 1.52
3544 6530 6.538021 CAGAAGTGCTCTATAAAGCTTGACAT 59.462 38.462 0.00 0.00 42.94 3.06
3546 6532 5.121811 AGTGCTCTATAAAGCTTGACATGG 58.878 41.667 0.00 0.00 42.94 3.66
3551 6537 2.507407 TAAAGCTTGACATGGGGTCC 57.493 50.000 0.00 0.00 46.38 4.46
3634 6621 1.171308 TTCGAAGTACTCCCTCCGTG 58.829 55.000 0.00 0.00 0.00 4.94
3635 6622 0.325933 TCGAAGTACTCCCTCCGTGA 59.674 55.000 0.00 0.00 0.00 4.35
3636 6623 1.171308 CGAAGTACTCCCTCCGTGAA 58.829 55.000 0.00 0.00 0.00 3.18
3637 6624 1.135460 CGAAGTACTCCCTCCGTGAAC 60.135 57.143 0.00 0.00 0.00 3.18
3653 6682 6.218019 TCCGTGAACGTTCTTATATTATGGG 58.782 40.000 27.32 11.61 37.74 4.00
3680 6709 5.278169 GGAGCGAGTAGAACGGATTTATGTA 60.278 44.000 0.00 0.00 0.00 2.29
3687 6716 5.036117 AGAACGGATTTATGTACATGGCT 57.964 39.130 18.81 2.21 0.00 4.75
3688 6717 5.437060 AGAACGGATTTATGTACATGGCTT 58.563 37.500 18.81 0.56 0.00 4.35
3689 6718 5.885912 AGAACGGATTTATGTACATGGCTTT 59.114 36.000 18.81 2.58 0.00 3.51
3690 6719 6.377146 AGAACGGATTTATGTACATGGCTTTT 59.623 34.615 18.81 3.07 0.00 2.27
3726 6755 6.403878 ACGTGTACATGGCTATTTTAGACTT 58.596 36.000 19.05 0.00 33.94 3.01
3746 6775 6.809196 AGACTTAGAAGACTATTCTTTGCGTG 59.191 38.462 0.00 0.00 42.53 5.34
3770 6799 2.677524 TCCCATGCCAAGCAGTGC 60.678 61.111 7.13 7.13 43.65 4.40
3831 6860 9.282247 CATCTATTTTACTTGATTGTGCTTCAC 57.718 33.333 0.00 0.00 34.56 3.18
3899 6928 6.252599 TCTATGAAGAGCCAATTACACCAT 57.747 37.500 0.00 0.00 0.00 3.55
3915 6944 1.272212 ACCATTGGCGCTAAAACTTGG 59.728 47.619 18.85 18.85 0.00 3.61
3966 6995 4.959723 GGCATACATTAAATTGGTGCCAT 58.040 39.130 16.57 0.00 44.87 4.40
3995 7024 2.772077 TTGGTGTGCATATACGGTGT 57.228 45.000 0.00 0.00 0.00 4.16
4000 7029 4.812091 TGGTGTGCATATACGGTGTAAATC 59.188 41.667 0.00 0.00 0.00 2.17
4001 7030 4.812091 GGTGTGCATATACGGTGTAAATCA 59.188 41.667 0.00 0.00 0.00 2.57
4066 7095 0.035152 TGAAATCCGCTGTCAGCCAT 60.035 50.000 19.14 8.55 38.18 4.40
4083 7112 1.897423 ATCGAATGACGGTGGCAGA 59.103 52.632 0.00 0.00 42.82 4.26
4111 7140 6.144402 GTGTGGCATGTTATTTTGTGAAGAAG 59.856 38.462 0.00 0.00 0.00 2.85
4112 7141 6.040278 TGTGGCATGTTATTTTGTGAAGAAGA 59.960 34.615 0.00 0.00 0.00 2.87
4177 7206 1.227176 GGGGATCGTGAGCGTAACC 60.227 63.158 0.00 0.00 39.49 2.85
4178 7207 1.514087 GGGATCGTGAGCGTAACCA 59.486 57.895 0.00 0.00 39.49 3.67
4179 7208 0.108520 GGGATCGTGAGCGTAACCAA 60.109 55.000 0.00 0.00 39.49 3.67
4180 7209 0.997196 GGATCGTGAGCGTAACCAAC 59.003 55.000 0.00 0.00 39.49 3.77
4188 7217 3.784412 CGTAACCAACGCGGCAGG 61.784 66.667 12.47 11.87 46.10 4.85
4189 7218 4.097863 GTAACCAACGCGGCAGGC 62.098 66.667 12.47 0.00 39.03 4.85
4199 7228 2.912542 CGGCAGGCGGAGATCCTA 60.913 66.667 8.89 0.00 31.52 2.94
4200 7229 2.498941 CGGCAGGCGGAGATCCTAA 61.499 63.158 8.89 0.00 31.52 2.69
4201 7230 1.369321 GGCAGGCGGAGATCCTAAG 59.631 63.158 0.00 0.00 31.52 2.18
4202 7231 1.403687 GGCAGGCGGAGATCCTAAGT 61.404 60.000 0.00 0.00 31.52 2.24
4203 7232 0.249657 GCAGGCGGAGATCCTAAGTG 60.250 60.000 0.00 0.00 31.52 3.16
4204 7233 0.390860 CAGGCGGAGATCCTAAGTGG 59.609 60.000 0.00 0.00 31.52 4.00
4205 7234 0.032017 AGGCGGAGATCCTAAGTGGT 60.032 55.000 0.00 0.00 37.07 4.16
4206 7235 0.105039 GGCGGAGATCCTAAGTGGTG 59.895 60.000 0.00 0.00 37.07 4.17
4207 7236 0.824759 GCGGAGATCCTAAGTGGTGT 59.175 55.000 0.00 0.00 37.07 4.16
4208 7237 1.471676 GCGGAGATCCTAAGTGGTGTG 60.472 57.143 0.00 0.00 37.07 3.82
4209 7238 1.137086 CGGAGATCCTAAGTGGTGTGG 59.863 57.143 0.00 0.00 37.07 4.17
4210 7239 1.486726 GGAGATCCTAAGTGGTGTGGG 59.513 57.143 0.00 0.00 37.07 4.61
4211 7240 0.912486 AGATCCTAAGTGGTGTGGGC 59.088 55.000 0.00 0.00 37.07 5.36
4212 7241 0.107165 GATCCTAAGTGGTGTGGGCC 60.107 60.000 0.00 0.00 37.07 5.80
4213 7242 1.910580 ATCCTAAGTGGTGTGGGCCG 61.911 60.000 0.00 0.00 37.07 6.13
4214 7243 2.046314 CTAAGTGGTGTGGGCCGG 60.046 66.667 0.00 0.00 0.00 6.13
4215 7244 4.338710 TAAGTGGTGTGGGCCGGC 62.339 66.667 21.18 21.18 0.00 6.13
4226 7255 2.203351 GGCCGGCCCATTAGAAGG 60.203 66.667 36.64 0.00 0.00 3.46
4231 7260 3.847621 GCCCATTAGAAGGCCAGC 58.152 61.111 5.01 0.00 43.76 4.85
4232 7261 2.189499 GCCCATTAGAAGGCCAGCG 61.189 63.158 5.01 0.00 43.76 5.18
4233 7262 2.189499 CCCATTAGAAGGCCAGCGC 61.189 63.158 5.01 0.00 0.00 5.92
4234 7263 1.153086 CCATTAGAAGGCCAGCGCT 60.153 57.895 2.64 2.64 34.44 5.92
4235 7264 1.162800 CCATTAGAAGGCCAGCGCTC 61.163 60.000 7.13 0.00 34.44 5.03
4236 7265 1.227380 ATTAGAAGGCCAGCGCTCG 60.227 57.895 7.13 0.38 34.44 5.03
4237 7266 1.676678 ATTAGAAGGCCAGCGCTCGA 61.677 55.000 7.13 0.00 34.44 4.04
4238 7267 2.558554 TTAGAAGGCCAGCGCTCGAC 62.559 60.000 7.13 1.73 34.44 4.20
4249 7278 3.200593 GCTCGACCGCTCGACCTA 61.201 66.667 0.00 0.00 44.14 3.08
4250 7279 2.544698 GCTCGACCGCTCGACCTAT 61.545 63.158 0.00 0.00 44.14 2.57
4251 7280 2.023318 CTCGACCGCTCGACCTATT 58.977 57.895 0.00 0.00 44.14 1.73
4252 7281 0.381089 CTCGACCGCTCGACCTATTT 59.619 55.000 0.00 0.00 44.14 1.40
4253 7282 0.379669 TCGACCGCTCGACCTATTTC 59.620 55.000 0.00 0.00 44.14 2.17
4254 7283 0.594284 CGACCGCTCGACCTATTTCC 60.594 60.000 0.00 0.00 43.06 3.13
4255 7284 0.594284 GACCGCTCGACCTATTTCCG 60.594 60.000 0.00 0.00 0.00 4.30
4256 7285 1.949631 CCGCTCGACCTATTTCCGC 60.950 63.158 0.00 0.00 0.00 5.54
4257 7286 1.949631 CGCTCGACCTATTTCCGCC 60.950 63.158 0.00 0.00 0.00 6.13
4258 7287 1.594564 GCTCGACCTATTTCCGCCC 60.595 63.158 0.00 0.00 0.00 6.13
4259 7288 1.299926 CTCGACCTATTTCCGCCCG 60.300 63.158 0.00 0.00 0.00 6.13
4260 7289 2.279918 CGACCTATTTCCGCCCGG 60.280 66.667 0.00 0.00 0.00 5.73
4261 7290 2.905681 GACCTATTTCCGCCCGGT 59.094 61.111 6.61 0.00 36.47 5.28
4262 7291 1.227468 GACCTATTTCCGCCCGGTC 60.227 63.158 6.61 0.00 37.57 4.79
4263 7292 2.279918 CCTATTTCCGCCCGGTCG 60.280 66.667 0.00 0.00 36.47 4.79
4264 7293 2.965462 CTATTTCCGCCCGGTCGC 60.965 66.667 0.00 0.00 36.47 5.19
4265 7294 3.441011 CTATTTCCGCCCGGTCGCT 62.441 63.158 0.00 0.00 36.47 4.93
4266 7295 3.435030 TATTTCCGCCCGGTCGCTC 62.435 63.158 0.00 0.00 36.47 5.03
4276 7305 3.745803 GGTCGCTCGACGGGAACT 61.746 66.667 15.07 0.00 45.41 3.01
4277 7306 2.202453 GTCGCTCGACGGGAACTC 60.202 66.667 0.00 0.00 43.89 3.01
4278 7307 3.437795 TCGCTCGACGGGAACTCC 61.438 66.667 0.00 0.00 43.89 3.85
4279 7308 3.441290 CGCTCGACGGGAACTCCT 61.441 66.667 0.00 0.00 38.44 3.69
4280 7309 2.110967 CGCTCGACGGGAACTCCTA 61.111 63.158 0.00 0.00 38.44 2.94
4281 7310 1.445716 CGCTCGACGGGAACTCCTAT 61.446 60.000 0.00 0.00 38.44 2.57
4282 7311 0.745468 GCTCGACGGGAACTCCTATT 59.255 55.000 0.00 0.00 35.95 1.73
4283 7312 1.136500 GCTCGACGGGAACTCCTATTT 59.864 52.381 0.00 0.00 35.95 1.40
4284 7313 2.810650 CTCGACGGGAACTCCTATTTG 58.189 52.381 0.00 0.00 35.95 2.32
4285 7314 1.479323 TCGACGGGAACTCCTATTTGG 59.521 52.381 0.00 0.00 35.95 3.28
4286 7315 1.206371 CGACGGGAACTCCTATTTGGT 59.794 52.381 0.00 0.00 37.07 3.67
4287 7316 2.737679 CGACGGGAACTCCTATTTGGTC 60.738 54.545 0.00 0.00 37.07 4.02
4288 7317 1.558294 ACGGGAACTCCTATTTGGTCC 59.442 52.381 0.00 0.00 37.07 4.46
4289 7318 1.472728 CGGGAACTCCTATTTGGTCCG 60.473 57.143 0.00 0.00 37.07 4.79
4290 7319 1.134189 GGGAACTCCTATTTGGTCCGG 60.134 57.143 0.00 0.00 37.07 5.14
4291 7320 1.664873 GAACTCCTATTTGGTCCGGC 58.335 55.000 0.00 0.00 37.07 6.13
4292 7321 0.107848 AACTCCTATTTGGTCCGGCG 60.108 55.000 0.00 0.00 37.07 6.46
4293 7322 0.974010 ACTCCTATTTGGTCCGGCGA 60.974 55.000 9.30 0.00 37.07 5.54
4294 7323 0.529992 CTCCTATTTGGTCCGGCGAC 60.530 60.000 9.30 4.52 38.38 5.19
4295 7324 0.974010 TCCTATTTGGTCCGGCGACT 60.974 55.000 9.30 0.00 39.15 4.18
4296 7325 0.748450 CCTATTTGGTCCGGCGACTA 59.252 55.000 9.30 0.00 39.15 2.59
4297 7326 1.343465 CCTATTTGGTCCGGCGACTAT 59.657 52.381 9.30 3.57 39.15 2.12
4298 7327 2.224209 CCTATTTGGTCCGGCGACTATT 60.224 50.000 9.30 0.00 39.15 1.73
4299 7328 2.413310 ATTTGGTCCGGCGACTATTT 57.587 45.000 9.30 0.00 39.15 1.40
4300 7329 1.729284 TTTGGTCCGGCGACTATTTC 58.271 50.000 9.30 0.00 39.15 2.17
4301 7330 0.899720 TTGGTCCGGCGACTATTTCT 59.100 50.000 9.30 0.00 39.15 2.52
4302 7331 0.458669 TGGTCCGGCGACTATTTCTC 59.541 55.000 9.30 0.00 39.15 2.87
4303 7332 0.594284 GGTCCGGCGACTATTTCTCG 60.594 60.000 9.30 0.00 39.15 4.04
4321 7350 3.243855 GCCTTAAGCGAGTCGAGAG 57.756 57.895 18.61 7.27 0.00 3.20
4322 7351 0.248702 GCCTTAAGCGAGTCGAGAGG 60.249 60.000 18.61 16.51 0.00 3.69
4323 7352 1.380524 CCTTAAGCGAGTCGAGAGGA 58.619 55.000 18.61 0.00 0.00 3.71
4324 7353 1.743958 CCTTAAGCGAGTCGAGAGGAA 59.256 52.381 18.61 1.34 0.00 3.36
4325 7354 2.163815 CCTTAAGCGAGTCGAGAGGAAA 59.836 50.000 18.61 0.15 0.00 3.13
4326 7355 2.915738 TAAGCGAGTCGAGAGGAAAC 57.084 50.000 18.61 0.00 0.00 2.78
4337 7366 4.057428 AGGAAACTCTCGCGCGCT 62.057 61.111 30.48 11.06 32.90 5.92
4338 7367 3.112709 GGAAACTCTCGCGCGCTT 61.113 61.111 30.48 15.65 0.00 4.68
4339 7368 2.668280 GGAAACTCTCGCGCGCTTT 61.668 57.895 30.48 21.70 0.00 3.51
4340 7369 1.507919 GAAACTCTCGCGCGCTTTG 60.508 57.895 30.48 18.20 0.00 2.77
4341 7370 2.818296 GAAACTCTCGCGCGCTTTGG 62.818 60.000 30.48 18.20 0.00 3.28
4342 7371 3.858868 AACTCTCGCGCGCTTTGGA 62.859 57.895 30.48 17.71 0.00 3.53
4343 7372 3.549150 CTCTCGCGCGCTTTGGAG 61.549 66.667 30.48 25.99 0.00 3.86
4346 7375 4.673298 TCGCGCGCTTTGGAGGAA 62.673 61.111 30.48 0.00 0.00 3.36
4347 7376 3.499737 CGCGCGCTTTGGAGGAAT 61.500 61.111 30.48 0.00 0.00 3.01
4348 7377 2.405191 GCGCGCTTTGGAGGAATC 59.595 61.111 26.67 0.00 0.00 2.52
4349 7378 2.703409 CGCGCTTTGGAGGAATCG 59.297 61.111 5.56 0.00 0.00 3.34
4350 7379 1.809619 CGCGCTTTGGAGGAATCGA 60.810 57.895 5.56 0.00 0.00 3.59
4351 7380 1.716172 GCGCTTTGGAGGAATCGAC 59.284 57.895 0.00 0.00 0.00 4.20
4352 7381 1.706287 GCGCTTTGGAGGAATCGACC 61.706 60.000 0.00 0.00 0.00 4.79
4353 7382 1.090052 CGCTTTGGAGGAATCGACCC 61.090 60.000 0.00 0.00 0.00 4.46
4354 7383 0.253327 GCTTTGGAGGAATCGACCCT 59.747 55.000 7.84 7.84 36.57 4.34
4355 7384 2.014068 GCTTTGGAGGAATCGACCCTG 61.014 57.143 12.44 0.32 33.36 4.45
4356 7385 0.035439 TTTGGAGGAATCGACCCTGC 60.035 55.000 16.92 16.92 41.80 4.85
4357 7386 0.909610 TTGGAGGAATCGACCCTGCT 60.910 55.000 21.88 6.72 41.94 4.24
4358 7387 1.330655 TGGAGGAATCGACCCTGCTC 61.331 60.000 21.88 13.82 41.94 4.26
4359 7388 1.066587 GAGGAATCGACCCTGCTCG 59.933 63.158 12.44 0.00 33.36 5.03
4360 7389 2.586357 GGAATCGACCCTGCTCGC 60.586 66.667 0.00 0.00 33.47 5.03
4361 7390 2.956964 GAATCGACCCTGCTCGCG 60.957 66.667 0.00 0.00 33.47 5.87
4362 7391 3.411418 GAATCGACCCTGCTCGCGA 62.411 63.158 9.26 9.26 37.17 5.87
4363 7392 3.417275 AATCGACCCTGCTCGCGAG 62.417 63.158 31.37 31.37 36.12 5.03
4366 7395 4.803426 GACCCTGCTCGCGAGTGG 62.803 72.222 34.46 31.96 0.00 4.00
4369 7398 4.069232 CCTGCTCGCGAGTGGGAA 62.069 66.667 34.46 15.78 36.52 3.97
4370 7399 2.811317 CTGCTCGCGAGTGGGAAC 60.811 66.667 34.46 18.65 36.52 3.62
4371 7400 3.573772 CTGCTCGCGAGTGGGAACA 62.574 63.158 34.46 21.96 36.52 3.18
4381 7410 4.390048 TGGGAACACCGCTAAAGC 57.610 55.556 0.00 0.00 44.64 3.51
4382 7411 1.758592 TGGGAACACCGCTAAAGCT 59.241 52.632 0.00 0.00 44.64 3.74
4383 7412 0.978151 TGGGAACACCGCTAAAGCTA 59.022 50.000 0.00 0.00 44.64 3.32
4384 7413 1.348366 TGGGAACACCGCTAAAGCTAA 59.652 47.619 0.00 0.00 44.64 3.09
4385 7414 1.736126 GGGAACACCGCTAAAGCTAAC 59.264 52.381 0.00 0.00 39.32 2.34
4386 7415 1.736126 GGAACACCGCTAAAGCTAACC 59.264 52.381 0.00 0.00 39.32 2.85
4387 7416 2.419667 GAACACCGCTAAAGCTAACCA 58.580 47.619 0.00 0.00 39.32 3.67
4388 7417 1.804601 ACACCGCTAAAGCTAACCAC 58.195 50.000 0.00 0.00 39.32 4.16
4389 7418 1.346722 ACACCGCTAAAGCTAACCACT 59.653 47.619 0.00 0.00 39.32 4.00
4390 7419 1.732259 CACCGCTAAAGCTAACCACTG 59.268 52.381 0.00 0.00 39.32 3.66
4391 7420 1.346722 ACCGCTAAAGCTAACCACTGT 59.653 47.619 0.00 0.00 39.32 3.55
4392 7421 1.732259 CCGCTAAAGCTAACCACTGTG 59.268 52.381 0.00 0.00 39.32 3.66
4393 7422 1.128692 CGCTAAAGCTAACCACTGTGC 59.871 52.381 1.29 0.00 39.32 4.57
4394 7423 2.427506 GCTAAAGCTAACCACTGTGCT 58.572 47.619 1.29 0.00 38.21 4.40
4395 7424 2.416893 GCTAAAGCTAACCACTGTGCTC 59.583 50.000 1.29 0.00 38.21 4.26
4396 7425 1.512926 AAAGCTAACCACTGTGCTCG 58.487 50.000 1.29 0.00 34.38 5.03
4397 7426 0.951040 AAGCTAACCACTGTGCTCGC 60.951 55.000 1.29 2.19 34.38 5.03
4398 7427 1.374758 GCTAACCACTGTGCTCGCT 60.375 57.895 1.29 0.00 0.00 4.93
4399 7428 1.355066 GCTAACCACTGTGCTCGCTC 61.355 60.000 1.29 0.00 0.00 5.03
4400 7429 0.737715 CTAACCACTGTGCTCGCTCC 60.738 60.000 1.29 0.00 0.00 4.70
4401 7430 2.167398 TAACCACTGTGCTCGCTCCC 62.167 60.000 1.29 0.00 0.00 4.30
4402 7431 4.007644 CCACTGTGCTCGCTCCCA 62.008 66.667 1.29 0.00 0.00 4.37
4403 7432 2.433838 CACTGTGCTCGCTCCCAG 60.434 66.667 0.00 0.00 0.00 4.45
4404 7433 2.919856 ACTGTGCTCGCTCCCAGT 60.920 61.111 0.00 0.00 33.48 4.00
4405 7434 2.345244 CTGTGCTCGCTCCCAGTT 59.655 61.111 0.00 0.00 0.00 3.16
4406 7435 1.185618 ACTGTGCTCGCTCCCAGTTA 61.186 55.000 0.00 0.00 34.64 2.24
4407 7436 0.737715 CTGTGCTCGCTCCCAGTTAC 60.738 60.000 0.00 0.00 0.00 2.50
4408 7437 1.185618 TGTGCTCGCTCCCAGTTACT 61.186 55.000 0.00 0.00 0.00 2.24
4409 7438 0.815734 GTGCTCGCTCCCAGTTACTA 59.184 55.000 0.00 0.00 0.00 1.82
4410 7439 1.409427 GTGCTCGCTCCCAGTTACTAT 59.591 52.381 0.00 0.00 0.00 2.12
4411 7440 2.108168 TGCTCGCTCCCAGTTACTATT 58.892 47.619 0.00 0.00 0.00 1.73
4412 7441 2.500098 TGCTCGCTCCCAGTTACTATTT 59.500 45.455 0.00 0.00 0.00 1.40
4413 7442 3.702548 TGCTCGCTCCCAGTTACTATTTA 59.297 43.478 0.00 0.00 0.00 1.40
4414 7443 4.202121 TGCTCGCTCCCAGTTACTATTTAG 60.202 45.833 0.00 0.00 0.00 1.85
4415 7444 4.202131 GCTCGCTCCCAGTTACTATTTAGT 60.202 45.833 0.00 0.00 40.24 2.24
4416 7445 5.009410 GCTCGCTCCCAGTTACTATTTAGTA 59.991 44.000 0.00 0.00 37.73 1.82
4417 7446 6.630444 TCGCTCCCAGTTACTATTTAGTAG 57.370 41.667 0.00 0.00 39.69 2.57
4418 7447 6.125029 TCGCTCCCAGTTACTATTTAGTAGT 58.875 40.000 0.00 0.00 45.49 2.73
4419 7448 7.282585 TCGCTCCCAGTTACTATTTAGTAGTA 58.717 38.462 0.00 0.00 41.84 1.82
4420 7449 7.443575 TCGCTCCCAGTTACTATTTAGTAGTAG 59.556 40.741 0.00 0.00 44.49 2.57
4421 7450 7.308469 CGCTCCCAGTTACTATTTAGTAGTAGG 60.308 44.444 0.00 2.46 44.49 3.18
4422 7451 7.723172 GCTCCCAGTTACTATTTAGTAGTAGGA 59.277 40.741 10.52 8.85 44.49 2.94
4423 7452 9.810870 CTCCCAGTTACTATTTAGTAGTAGGAT 57.189 37.037 10.52 0.00 44.49 3.24
4424 7453 9.804977 TCCCAGTTACTATTTAGTAGTAGGATC 57.195 37.037 10.52 0.00 44.49 3.36
4425 7454 8.728833 CCCAGTTACTATTTAGTAGTAGGATCG 58.271 40.741 10.52 0.00 44.49 3.69
4426 7455 8.235905 CCAGTTACTATTTAGTAGTAGGATCGC 58.764 40.741 0.00 0.00 44.49 4.58
4427 7456 7.956403 CAGTTACTATTTAGTAGTAGGATCGCG 59.044 40.741 0.00 0.00 44.49 5.87
4428 7457 7.875041 AGTTACTATTTAGTAGTAGGATCGCGA 59.125 37.037 13.09 13.09 44.49 5.87
4429 7458 6.479095 ACTATTTAGTAGTAGGATCGCGAC 57.521 41.667 12.93 5.43 41.84 5.19
4430 7459 4.762956 ATTTAGTAGTAGGATCGCGACC 57.237 45.455 12.93 15.45 0.00 4.79
4431 7460 3.482156 TTAGTAGTAGGATCGCGACCT 57.518 47.619 26.03 26.03 41.05 3.85
4432 7461 4.607293 TTAGTAGTAGGATCGCGACCTA 57.393 45.455 24.40 24.40 38.76 3.08
4438 7467 2.172851 AGGATCGCGACCTACTAGAG 57.827 55.000 23.11 0.00 35.84 2.43
4446 7475 3.747266 CCTACTAGAGGCGACCGG 58.253 66.667 0.00 0.00 38.96 5.28
4447 7476 1.147824 CCTACTAGAGGCGACCGGA 59.852 63.158 9.46 0.00 38.96 5.14
4448 7477 0.885596 CCTACTAGAGGCGACCGGAG 60.886 65.000 9.46 2.13 38.96 4.63
4449 7478 0.179051 CTACTAGAGGCGACCGGAGT 60.179 60.000 9.46 0.00 0.00 3.85
4450 7479 0.254178 TACTAGAGGCGACCGGAGTT 59.746 55.000 9.46 0.00 0.00 3.01
4451 7480 1.313812 ACTAGAGGCGACCGGAGTTG 61.314 60.000 9.46 0.00 0.00 3.16
4452 7481 2.005960 CTAGAGGCGACCGGAGTTGG 62.006 65.000 9.46 0.00 0.00 3.77
4454 7483 2.283388 AGGCGACCGGAGTTGGTA 60.283 61.111 9.46 0.00 44.01 3.25
4455 7484 1.673808 GAGGCGACCGGAGTTGGTAT 61.674 60.000 9.46 0.00 44.01 2.73
4456 7485 1.219935 GGCGACCGGAGTTGGTATT 59.780 57.895 9.46 0.00 44.01 1.89
4457 7486 0.808847 GGCGACCGGAGTTGGTATTC 60.809 60.000 9.46 0.00 44.01 1.75
4458 7487 0.175073 GCGACCGGAGTTGGTATTCT 59.825 55.000 9.46 0.00 44.01 2.40
4459 7488 1.801765 GCGACCGGAGTTGGTATTCTC 60.802 57.143 9.46 0.00 44.01 2.87
4460 7489 1.202382 CGACCGGAGTTGGTATTCTCC 60.202 57.143 9.46 0.00 44.01 3.71
4468 7497 6.685527 GGAGTTGGTATTCTCCATCTTTTC 57.314 41.667 6.37 0.00 46.59 2.29
4469 7498 6.418946 GGAGTTGGTATTCTCCATCTTTTCT 58.581 40.000 6.37 0.00 46.59 2.52
4470 7499 6.887002 GGAGTTGGTATTCTCCATCTTTTCTT 59.113 38.462 6.37 0.00 46.59 2.52
4471 7500 7.394641 GGAGTTGGTATTCTCCATCTTTTCTTT 59.605 37.037 6.37 0.00 46.59 2.52
4472 7501 8.115490 AGTTGGTATTCTCCATCTTTTCTTTG 57.885 34.615 0.00 0.00 34.91 2.77
4473 7502 7.725844 AGTTGGTATTCTCCATCTTTTCTTTGT 59.274 33.333 0.00 0.00 34.91 2.83
4474 7503 8.360390 GTTGGTATTCTCCATCTTTTCTTTGTT 58.640 33.333 0.00 0.00 37.33 2.83
4475 7504 8.477419 TGGTATTCTCCATCTTTTCTTTGTTT 57.523 30.769 0.00 0.00 31.96 2.83
4476 7505 8.923270 TGGTATTCTCCATCTTTTCTTTGTTTT 58.077 29.630 0.00 0.00 31.96 2.43
4477 7506 9.764363 GGTATTCTCCATCTTTTCTTTGTTTTT 57.236 29.630 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 9.998106 GCGGATTTGGGTTGTATATAGATATAT 57.002 33.333 0.00 0.00 33.68 0.86
10 11 8.139350 CGCGGATTTGGGTTGTATATAGATATA 58.861 37.037 0.00 0.00 0.00 0.86
11 12 6.984474 CGCGGATTTGGGTTGTATATAGATAT 59.016 38.462 0.00 0.00 0.00 1.63
12 13 6.334989 CGCGGATTTGGGTTGTATATAGATA 58.665 40.000 0.00 0.00 0.00 1.98
13 14 5.175859 CGCGGATTTGGGTTGTATATAGAT 58.824 41.667 0.00 0.00 0.00 1.98
14 15 4.562082 CGCGGATTTGGGTTGTATATAGA 58.438 43.478 0.00 0.00 0.00 1.98
15 16 3.124636 GCGCGGATTTGGGTTGTATATAG 59.875 47.826 8.83 0.00 0.00 1.31
16 17 3.068560 GCGCGGATTTGGGTTGTATATA 58.931 45.455 8.83 0.00 0.00 0.86
17 18 1.877443 GCGCGGATTTGGGTTGTATAT 59.123 47.619 8.83 0.00 0.00 0.86
18 19 1.301423 GCGCGGATTTGGGTTGTATA 58.699 50.000 8.83 0.00 0.00 1.47
19 20 1.381165 GGCGCGGATTTGGGTTGTAT 61.381 55.000 8.83 0.00 0.00 2.29
20 21 2.041686 GGCGCGGATTTGGGTTGTA 61.042 57.895 8.83 0.00 0.00 2.41
21 22 3.370231 GGCGCGGATTTGGGTTGT 61.370 61.111 8.83 0.00 0.00 3.32
22 23 3.051392 GAGGCGCGGATTTGGGTTG 62.051 63.158 8.83 0.00 0.00 3.77
23 24 2.750237 GAGGCGCGGATTTGGGTT 60.750 61.111 8.83 0.00 0.00 4.11
24 25 4.796495 GGAGGCGCGGATTTGGGT 62.796 66.667 8.83 0.00 0.00 4.51
81 82 4.821589 AAGCTAGCGGAGGTGCGC 62.822 66.667 9.55 7.91 40.22 6.09
82 83 2.887568 CAAGCTAGCGGAGGTGCG 60.888 66.667 9.55 0.00 40.22 5.34
83 84 3.198489 GCAAGCTAGCGGAGGTGC 61.198 66.667 9.55 11.28 40.22 5.01
84 85 2.512515 GGCAAGCTAGCGGAGGTG 60.513 66.667 9.55 5.16 40.22 4.00
85 86 4.148825 CGGCAAGCTAGCGGAGGT 62.149 66.667 9.55 0.00 44.89 3.85
105 106 3.657350 ATGGGGTGTTGGGGACGG 61.657 66.667 0.00 0.00 0.00 4.79
106 107 2.361104 CATGGGGTGTTGGGGACG 60.361 66.667 0.00 0.00 0.00 4.79
107 108 2.679996 GCATGGGGTGTTGGGGAC 60.680 66.667 0.00 0.00 0.00 4.46
108 109 3.188903 TGCATGGGGTGTTGGGGA 61.189 61.111 0.00 0.00 0.00 4.81
109 110 2.681064 CTGCATGGGGTGTTGGGG 60.681 66.667 0.00 0.00 0.00 4.96
110 111 1.978617 GTCTGCATGGGGTGTTGGG 60.979 63.158 0.00 0.00 0.00 4.12
111 112 1.228521 TGTCTGCATGGGGTGTTGG 60.229 57.895 0.00 0.00 0.00 3.77
112 113 1.855213 CGTGTCTGCATGGGGTGTTG 61.855 60.000 0.00 0.00 0.00 3.33
113 114 1.600636 CGTGTCTGCATGGGGTGTT 60.601 57.895 0.00 0.00 0.00 3.32
114 115 2.032528 CGTGTCTGCATGGGGTGT 59.967 61.111 0.00 0.00 0.00 4.16
115 116 1.742880 CTCGTGTCTGCATGGGGTG 60.743 63.158 0.00 0.00 32.65 4.61
116 117 2.665000 CTCGTGTCTGCATGGGGT 59.335 61.111 0.00 0.00 32.65 4.95
117 118 2.821366 GCTCGTGTCTGCATGGGG 60.821 66.667 0.00 0.00 32.79 4.96
118 119 1.812922 GAGCTCGTGTCTGCATGGG 60.813 63.158 0.00 0.00 35.24 4.00
119 120 1.812922 GGAGCTCGTGTCTGCATGG 60.813 63.158 7.83 0.00 32.65 3.66
120 121 1.812922 GGGAGCTCGTGTCTGCATG 60.813 63.158 7.83 0.00 0.00 4.06
121 122 2.581354 GGGAGCTCGTGTCTGCAT 59.419 61.111 7.83 0.00 0.00 3.96
122 123 3.695606 GGGGAGCTCGTGTCTGCA 61.696 66.667 7.83 0.00 0.00 4.41
123 124 4.803426 CGGGGAGCTCGTGTCTGC 62.803 72.222 7.83 0.00 0.00 4.26
124 125 4.803426 GCGGGGAGCTCGTGTCTG 62.803 72.222 7.83 3.76 44.04 3.51
145 146 3.123620 CTCTTGTGCAGCTCGGGC 61.124 66.667 0.00 0.00 39.06 6.13
146 147 2.435586 CCTCTTGTGCAGCTCGGG 60.436 66.667 0.00 0.00 0.00 5.14
147 148 2.435586 CCCTCTTGTGCAGCTCGG 60.436 66.667 0.00 0.00 0.00 4.63
148 149 3.123620 GCCCTCTTGTGCAGCTCG 61.124 66.667 0.00 0.00 0.00 5.03
149 150 3.123620 CGCCCTCTTGTGCAGCTC 61.124 66.667 0.00 0.00 0.00 4.09
150 151 2.680974 TTTCGCCCTCTTGTGCAGCT 62.681 55.000 0.00 0.00 0.00 4.24
151 152 2.260869 TTTCGCCCTCTTGTGCAGC 61.261 57.895 0.00 0.00 0.00 5.25
152 153 1.576421 GTTTCGCCCTCTTGTGCAG 59.424 57.895 0.00 0.00 0.00 4.41
153 154 1.896660 GGTTTCGCCCTCTTGTGCA 60.897 57.895 0.00 0.00 0.00 4.57
154 155 2.954611 GGTTTCGCCCTCTTGTGC 59.045 61.111 0.00 0.00 0.00 4.57
155 156 1.291877 CTCGGTTTCGCCCTCTTGTG 61.292 60.000 0.00 0.00 36.13 3.33
156 157 1.004918 CTCGGTTTCGCCCTCTTGT 60.005 57.895 0.00 0.00 36.13 3.16
157 158 0.737715 CTCTCGGTTTCGCCCTCTTG 60.738 60.000 0.00 0.00 36.13 3.02
158 159 1.592223 CTCTCGGTTTCGCCCTCTT 59.408 57.895 0.00 0.00 36.13 2.85
159 160 2.352032 CCTCTCGGTTTCGCCCTCT 61.352 63.158 0.00 0.00 36.13 3.69
160 161 2.184579 CCTCTCGGTTTCGCCCTC 59.815 66.667 0.00 0.00 36.13 4.30
161 162 4.083862 GCCTCTCGGTTTCGCCCT 62.084 66.667 0.00 0.00 36.13 5.19
478 479 7.954786 ACTAACAAAGTTTTGAAAACAATTGCG 59.045 29.630 25.57 19.64 40.55 4.85
548 550 5.359860 AGATCTTTTTGTTCGGTTCTTGGTT 59.640 36.000 0.00 0.00 0.00 3.67
549 551 4.887655 AGATCTTTTTGTTCGGTTCTTGGT 59.112 37.500 0.00 0.00 0.00 3.67
550 552 5.215160 CAGATCTTTTTGTTCGGTTCTTGG 58.785 41.667 0.00 0.00 0.00 3.61
551 553 5.215160 CCAGATCTTTTTGTTCGGTTCTTG 58.785 41.667 0.00 0.00 0.00 3.02
552 554 4.887655 ACCAGATCTTTTTGTTCGGTTCTT 59.112 37.500 0.00 0.00 0.00 2.52
560 562 8.417884 TCCGATTTTTAACCAGATCTTTTTGTT 58.582 29.630 0.00 0.00 0.00 2.83
666 672 2.875933 GGACATTCTGTTTGACCGAACA 59.124 45.455 3.12 3.12 37.87 3.18
758 769 3.100671 AGGTGACTGGTATCTTGTCTCC 58.899 50.000 10.66 10.66 41.77 3.71
805 830 2.096268 TGCGTGAATTTGAGCTTCTTCG 60.096 45.455 0.00 0.00 0.00 3.79
1086 2048 0.034670 ATTTGGCAGAGTGAGGAGGC 60.035 55.000 0.00 0.00 0.00 4.70
1163 2125 1.370172 GTGACGAACACGACGAGCT 60.370 57.895 0.00 0.00 39.78 4.09
1173 2135 0.039437 TCTTGAGCCTCGTGACGAAC 60.039 55.000 9.64 4.22 34.74 3.95
1615 2586 4.026744 TGGAAGGAGTATGGAGTCTGAAG 58.973 47.826 0.00 0.00 0.00 3.02
1619 2590 4.551215 AGATGGAAGGAGTATGGAGTCT 57.449 45.455 0.00 0.00 0.00 3.24
1620 2591 4.651503 TGAAGATGGAAGGAGTATGGAGTC 59.348 45.833 0.00 0.00 0.00 3.36
1664 4541 9.225436 TCTGAAGAGTGATAGCATATACTACAG 57.775 37.037 0.00 0.00 0.00 2.74
2003 4903 2.904866 GTTTGTGGTCTGCGGGCA 60.905 61.111 0.00 0.00 0.00 5.36
2065 4965 3.822192 CGCGATCTGTGGGGTCGA 61.822 66.667 0.00 0.00 37.55 4.20
2251 5151 1.536709 GCTTTTGTGCTTCTGGTGGTG 60.537 52.381 0.00 0.00 0.00 4.17
2292 5192 4.301505 GCGCCATCTTTGGAGACA 57.698 55.556 0.00 0.00 46.92 3.41
2428 5328 0.460109 CCATCTTGATGGCGTCGTCA 60.460 55.000 8.09 8.09 37.15 4.35
2505 5405 0.757561 TTGTCGTGGGTCTCTGGACA 60.758 55.000 0.00 0.00 43.77 4.02
2914 5826 4.954118 TGTGGGTCGTGAGGGGCT 62.954 66.667 0.00 0.00 0.00 5.19
3222 6160 9.974750 GATACTTTGAAGCTATGAACTGTAAAC 57.025 33.333 0.00 0.00 0.00 2.01
3223 6161 9.162764 GGATACTTTGAAGCTATGAACTGTAAA 57.837 33.333 0.00 0.00 0.00 2.01
3224 6162 7.769044 GGGATACTTTGAAGCTATGAACTGTAA 59.231 37.037 0.00 0.00 0.00 2.41
3225 6163 7.093068 TGGGATACTTTGAAGCTATGAACTGTA 60.093 37.037 0.00 0.00 0.00 2.74
3226 6164 6.116126 GGGATACTTTGAAGCTATGAACTGT 58.884 40.000 0.00 0.00 0.00 3.55
3227 6165 6.115446 TGGGATACTTTGAAGCTATGAACTG 58.885 40.000 0.00 0.00 0.00 3.16
3228 6166 6.313519 TGGGATACTTTGAAGCTATGAACT 57.686 37.500 0.00 0.00 0.00 3.01
3229 6167 7.573968 ATTGGGATACTTTGAAGCTATGAAC 57.426 36.000 0.00 0.00 0.00 3.18
3230 6168 7.833682 TGAATTGGGATACTTTGAAGCTATGAA 59.166 33.333 0.00 0.00 0.00 2.57
3231 6169 7.283127 GTGAATTGGGATACTTTGAAGCTATGA 59.717 37.037 0.00 0.00 0.00 2.15
3232 6170 7.284034 AGTGAATTGGGATACTTTGAAGCTATG 59.716 37.037 0.00 0.00 0.00 2.23
3233 6171 7.349598 AGTGAATTGGGATACTTTGAAGCTAT 58.650 34.615 0.00 0.00 0.00 2.97
3234 6172 6.721318 AGTGAATTGGGATACTTTGAAGCTA 58.279 36.000 0.00 0.00 0.00 3.32
3235 6173 5.574188 AGTGAATTGGGATACTTTGAAGCT 58.426 37.500 0.00 0.00 0.00 3.74
3236 6174 5.649831 AGAGTGAATTGGGATACTTTGAAGC 59.350 40.000 0.00 0.00 0.00 3.86
3237 6175 7.391554 TGAAGAGTGAATTGGGATACTTTGAAG 59.608 37.037 0.00 0.00 0.00 3.02
3238 6176 7.230747 TGAAGAGTGAATTGGGATACTTTGAA 58.769 34.615 0.00 0.00 0.00 2.69
3239 6177 6.778821 TGAAGAGTGAATTGGGATACTTTGA 58.221 36.000 0.00 0.00 0.00 2.69
3240 6178 6.881065 TCTGAAGAGTGAATTGGGATACTTTG 59.119 38.462 0.00 0.00 0.00 2.77
3241 6179 7.020827 TCTGAAGAGTGAATTGGGATACTTT 57.979 36.000 0.00 0.00 0.00 2.66
3242 6180 6.627087 TCTGAAGAGTGAATTGGGATACTT 57.373 37.500 0.00 0.00 0.00 2.24
3243 6181 6.214412 ACTTCTGAAGAGTGAATTGGGATACT 59.786 38.462 23.36 0.00 0.00 2.12
3244 6182 6.410540 ACTTCTGAAGAGTGAATTGGGATAC 58.589 40.000 23.36 0.00 0.00 2.24
3245 6183 6.627087 ACTTCTGAAGAGTGAATTGGGATA 57.373 37.500 23.36 0.00 0.00 2.59
3246 6184 5.511386 ACTTCTGAAGAGTGAATTGGGAT 57.489 39.130 23.36 0.00 0.00 3.85
3247 6185 4.982241 ACTTCTGAAGAGTGAATTGGGA 57.018 40.909 23.36 0.00 0.00 4.37
3248 6186 5.065914 TGAACTTCTGAAGAGTGAATTGGG 58.934 41.667 23.36 0.00 0.00 4.12
3249 6187 6.624352 TTGAACTTCTGAAGAGTGAATTGG 57.376 37.500 23.36 0.00 0.00 3.16
3250 6188 8.566260 AGATTTGAACTTCTGAAGAGTGAATTG 58.434 33.333 23.36 0.00 0.00 2.32
3251 6189 8.688747 AGATTTGAACTTCTGAAGAGTGAATT 57.311 30.769 23.36 6.42 0.00 2.17
3252 6190 8.688747 AAGATTTGAACTTCTGAAGAGTGAAT 57.311 30.769 23.36 15.82 0.00 2.57
3253 6191 7.770433 TGAAGATTTGAACTTCTGAAGAGTGAA 59.230 33.333 23.36 12.35 42.63 3.18
3254 6192 7.275183 TGAAGATTTGAACTTCTGAAGAGTGA 58.725 34.615 23.36 2.96 42.63 3.41
3255 6193 7.307870 CCTGAAGATTTGAACTTCTGAAGAGTG 60.308 40.741 23.36 0.00 42.03 3.51
3256 6194 6.709846 CCTGAAGATTTGAACTTCTGAAGAGT 59.290 38.462 23.36 10.76 42.03 3.24
3257 6195 6.933521 TCCTGAAGATTTGAACTTCTGAAGAG 59.066 38.462 23.36 5.98 42.03 2.85
3258 6196 6.830912 TCCTGAAGATTTGAACTTCTGAAGA 58.169 36.000 23.36 1.29 42.03 2.87
3259 6197 7.228308 ACTTCCTGAAGATTTGAACTTCTGAAG 59.772 37.037 15.59 15.59 45.44 3.02
3260 6198 7.056635 ACTTCCTGAAGATTTGAACTTCTGAA 58.943 34.615 13.58 0.00 42.03 3.02
3261 6199 6.595682 ACTTCCTGAAGATTTGAACTTCTGA 58.404 36.000 13.58 0.00 42.03 3.27
3262 6200 6.874288 ACTTCCTGAAGATTTGAACTTCTG 57.126 37.500 13.58 0.00 42.63 3.02
3263 6201 7.056635 TGAACTTCCTGAAGATTTGAACTTCT 58.943 34.615 13.58 0.00 42.63 2.85
3264 6202 7.012799 ACTGAACTTCCTGAAGATTTGAACTTC 59.987 37.037 13.58 0.00 40.79 3.01
3265 6203 6.830838 ACTGAACTTCCTGAAGATTTGAACTT 59.169 34.615 13.58 0.00 40.79 2.66
3266 6204 6.360618 ACTGAACTTCCTGAAGATTTGAACT 58.639 36.000 13.58 0.00 40.79 3.01
3267 6205 6.484977 AGACTGAACTTCCTGAAGATTTGAAC 59.515 38.462 13.58 0.79 40.79 3.18
3268 6206 6.484643 CAGACTGAACTTCCTGAAGATTTGAA 59.515 38.462 13.58 0.00 40.79 2.69
3269 6207 5.994054 CAGACTGAACTTCCTGAAGATTTGA 59.006 40.000 13.58 0.00 40.79 2.69
3270 6208 5.762218 ACAGACTGAACTTCCTGAAGATTTG 59.238 40.000 10.08 4.18 40.79 2.32
3271 6209 5.934781 ACAGACTGAACTTCCTGAAGATTT 58.065 37.500 10.08 0.00 40.79 2.17
3272 6210 5.306678 AGACAGACTGAACTTCCTGAAGATT 59.693 40.000 10.08 4.55 40.79 2.40
3273 6211 4.837860 AGACAGACTGAACTTCCTGAAGAT 59.162 41.667 10.08 1.49 40.79 2.40
3274 6212 4.219115 AGACAGACTGAACTTCCTGAAGA 58.781 43.478 10.08 0.00 40.79 2.87
3275 6213 4.599047 AGACAGACTGAACTTCCTGAAG 57.401 45.455 10.08 5.37 43.79 3.02
3276 6214 6.479972 TTTAGACAGACTGAACTTCCTGAA 57.520 37.500 10.08 0.00 0.00 3.02
3277 6215 6.672266 ATTTAGACAGACTGAACTTCCTGA 57.328 37.500 10.08 0.00 0.00 3.86
3278 6216 7.359598 CGAAATTTAGACAGACTGAACTTCCTG 60.360 40.741 10.08 0.00 30.33 3.86
3279 6217 6.647067 CGAAATTTAGACAGACTGAACTTCCT 59.353 38.462 10.08 0.00 30.33 3.36
3291 6229 4.749245 AAGCACCACGAAATTTAGACAG 57.251 40.909 5.22 0.00 0.00 3.51
3310 6248 4.084507 CGAGCTTAAACTGCAATCGAAAG 58.915 43.478 0.00 0.00 32.36 2.62
3315 6254 3.788163 GCAATCGAGCTTAAACTGCAATC 59.212 43.478 0.00 0.00 0.00 2.67
3327 6266 0.755079 TGCTATCCTGCAATCGAGCT 59.245 50.000 10.57 0.00 40.29 4.09
3544 6530 1.081092 CTCTTCCCTCTGGACCCCA 59.919 63.158 0.00 0.00 41.57 4.96
3546 6532 0.978667 GTCCTCTTCCCTCTGGACCC 60.979 65.000 0.00 0.00 41.57 4.46
3551 6537 0.251634 GCCTTGTCCTCTTCCCTCTG 59.748 60.000 0.00 0.00 0.00 3.35
3621 6608 0.600057 AACGTTCACGGAGGGAGTAC 59.400 55.000 4.07 0.00 44.95 2.73
3634 6621 6.449698 TCCGTCCCATAATATAAGAACGTTC 58.550 40.000 20.71 20.71 0.00 3.95
3635 6622 6.409524 TCCGTCCCATAATATAAGAACGTT 57.590 37.500 0.00 0.00 0.00 3.99
3636 6623 5.566230 GCTCCGTCCCATAATATAAGAACGT 60.566 44.000 0.00 0.00 0.00 3.99
3637 6624 4.863131 GCTCCGTCCCATAATATAAGAACG 59.137 45.833 0.00 0.00 0.00 3.95
3653 6682 1.062206 CCGTTCTACTCGCTCCGTC 59.938 63.158 0.00 0.00 0.00 4.79
3698 6727 1.567504 ATAGCCATGTACACGTTCGC 58.432 50.000 0.00 0.00 0.00 4.70
3703 6732 6.903883 AAGTCTAAAATAGCCATGTACACG 57.096 37.500 0.00 0.00 0.00 4.49
3704 6733 9.595823 TTCTAAGTCTAAAATAGCCATGTACAC 57.404 33.333 0.00 0.00 0.00 2.90
3726 6755 5.401531 ACCACGCAAAGAATAGTCTTCTA 57.598 39.130 5.80 0.00 43.59 2.10
3746 6775 1.458639 GCTTGGCATGGGAGCATACC 61.459 60.000 4.08 0.00 36.45 2.73
3770 6799 7.461107 CCAACCGTAGAATACATTTACAGTTG 58.539 38.462 0.00 0.00 43.24 3.16
3831 6860 6.362016 TGCTTACGCATTTTCAACATTTACAG 59.638 34.615 0.00 0.00 42.25 2.74
3870 6899 9.331282 GTGTAATTGGCTCTTCATAGATTTACT 57.669 33.333 0.00 0.00 0.00 2.24
3873 6902 7.118723 TGGTGTAATTGGCTCTTCATAGATTT 58.881 34.615 0.00 0.00 0.00 2.17
3899 6928 1.284408 CGCCAAGTTTTAGCGCCAA 59.716 52.632 2.29 0.00 43.72 4.52
3966 6995 6.256975 CGTATATGCACACCAAAGCTAAGTTA 59.743 38.462 0.00 0.00 0.00 2.24
4000 7029 7.809806 TCAGCATCATATTCTTATACAGACGTG 59.190 37.037 0.00 0.00 0.00 4.49
4001 7030 7.810282 GTCAGCATCATATTCTTATACAGACGT 59.190 37.037 0.00 0.00 0.00 4.34
4066 7095 1.215382 CTCTGCCACCGTCATTCGA 59.785 57.895 0.00 0.00 42.86 3.71
4083 7112 2.295909 ACAAAATAACATGCCACACGCT 59.704 40.909 0.00 0.00 38.78 5.07
4136 7165 1.533753 CCAAGGCAGGGCTTTTCCA 60.534 57.895 5.24 0.00 36.21 3.53
4163 7192 2.733127 CGTTGGTTACGCTCACGAT 58.267 52.632 0.00 0.00 44.26 3.73
4182 7211 2.427540 CTTAGGATCTCCGCCTGCCG 62.428 65.000 0.00 0.00 42.08 5.69
4183 7212 1.369321 CTTAGGATCTCCGCCTGCC 59.631 63.158 0.00 0.00 42.08 4.85
4184 7213 0.249657 CACTTAGGATCTCCGCCTGC 60.250 60.000 0.00 0.00 42.08 4.85
4185 7214 0.390860 CCACTTAGGATCTCCGCCTG 59.609 60.000 0.00 0.00 41.22 4.85
4186 7215 0.032017 ACCACTTAGGATCTCCGCCT 60.032 55.000 0.00 0.00 41.22 5.52
4187 7216 0.105039 CACCACTTAGGATCTCCGCC 59.895 60.000 0.00 0.00 41.22 6.13
4188 7217 0.824759 ACACCACTTAGGATCTCCGC 59.175 55.000 0.00 0.00 41.22 5.54
4189 7218 1.137086 CCACACCACTTAGGATCTCCG 59.863 57.143 0.00 0.00 41.22 4.63
4190 7219 1.486726 CCCACACCACTTAGGATCTCC 59.513 57.143 0.00 0.00 41.22 3.71
4191 7220 1.134371 GCCCACACCACTTAGGATCTC 60.134 57.143 0.00 0.00 41.22 2.75
4192 7221 0.912486 GCCCACACCACTTAGGATCT 59.088 55.000 0.00 0.00 41.22 2.75
4193 7222 0.107165 GGCCCACACCACTTAGGATC 60.107 60.000 0.00 0.00 41.22 3.36
4194 7223 1.910580 CGGCCCACACCACTTAGGAT 61.911 60.000 0.00 0.00 41.22 3.24
4195 7224 2.589157 CGGCCCACACCACTTAGGA 61.589 63.158 0.00 0.00 41.22 2.94
4196 7225 2.046314 CGGCCCACACCACTTAGG 60.046 66.667 0.00 0.00 45.67 2.69
4197 7226 2.046314 CCGGCCCACACCACTTAG 60.046 66.667 0.00 0.00 0.00 2.18
4198 7227 4.338710 GCCGGCCCACACCACTTA 62.339 66.667 18.11 0.00 0.00 2.24
4209 7238 2.203351 CCTTCTAATGGGCCGGCC 60.203 66.667 38.57 38.57 0.00 6.13
4210 7239 2.907407 GCCTTCTAATGGGCCGGC 60.907 66.667 21.18 21.18 42.30 6.13
4215 7244 2.189499 GCGCTGGCCTTCTAATGGG 61.189 63.158 3.32 0.00 0.00 4.00
4216 7245 1.153086 AGCGCTGGCCTTCTAATGG 60.153 57.895 10.39 0.00 41.24 3.16
4217 7246 1.493950 CGAGCGCTGGCCTTCTAATG 61.494 60.000 18.48 0.00 41.24 1.90
4218 7247 1.227380 CGAGCGCTGGCCTTCTAAT 60.227 57.895 18.48 0.00 41.24 1.73
4219 7248 2.184322 CGAGCGCTGGCCTTCTAA 59.816 61.111 18.48 0.00 41.24 2.10
4220 7249 2.754254 TCGAGCGCTGGCCTTCTA 60.754 61.111 18.48 0.00 41.24 2.10
4221 7250 4.443266 GTCGAGCGCTGGCCTTCT 62.443 66.667 18.48 0.00 41.24 2.85
4236 7265 0.594284 CGGAAATAGGTCGAGCGGTC 60.594 60.000 9.28 4.06 0.00 4.79
4237 7266 1.436336 CGGAAATAGGTCGAGCGGT 59.564 57.895 9.28 0.00 0.00 5.68
4238 7267 1.949631 GCGGAAATAGGTCGAGCGG 60.950 63.158 9.28 0.00 0.00 5.52
4239 7268 1.949631 GGCGGAAATAGGTCGAGCG 60.950 63.158 9.28 0.00 0.00 5.03
4240 7269 1.594564 GGGCGGAAATAGGTCGAGC 60.595 63.158 6.48 6.48 0.00 5.03
4241 7270 1.299926 CGGGCGGAAATAGGTCGAG 60.300 63.158 0.00 0.00 0.00 4.04
4242 7271 2.788640 CCGGGCGGAAATAGGTCGA 61.789 63.158 0.00 0.00 37.50 4.20
4243 7272 2.279918 CCGGGCGGAAATAGGTCG 60.280 66.667 0.00 0.00 37.50 4.79
4244 7273 1.227468 GACCGGGCGGAAATAGGTC 60.227 63.158 6.32 0.00 43.55 3.85
4245 7274 2.905681 GACCGGGCGGAAATAGGT 59.094 61.111 6.32 0.00 38.96 3.08
4246 7275 2.279918 CGACCGGGCGGAAATAGG 60.280 66.667 25.90 0.00 38.96 2.57
4247 7276 2.965462 GCGACCGGGCGGAAATAG 60.965 66.667 34.44 0.54 38.96 1.73
4248 7277 3.435030 GAGCGACCGGGCGGAAATA 62.435 63.158 34.44 0.00 38.96 1.40
4249 7278 4.832608 GAGCGACCGGGCGGAAAT 62.833 66.667 34.44 1.56 38.96 2.17
4259 7288 3.680338 GAGTTCCCGTCGAGCGACC 62.680 68.421 16.35 3.19 44.77 4.79
4260 7289 2.202453 GAGTTCCCGTCGAGCGAC 60.202 66.667 12.65 12.65 44.77 5.19
4261 7290 2.526450 TAGGAGTTCCCGTCGAGCGA 62.526 60.000 8.63 0.00 44.77 4.93
4262 7291 1.445716 ATAGGAGTTCCCGTCGAGCG 61.446 60.000 0.00 0.00 40.87 5.03
4263 7292 0.745468 AATAGGAGTTCCCGTCGAGC 59.255 55.000 0.00 0.00 40.87 5.03
4264 7293 2.481449 CCAAATAGGAGTTCCCGTCGAG 60.481 54.545 0.00 0.00 41.22 4.04
4265 7294 1.479323 CCAAATAGGAGTTCCCGTCGA 59.521 52.381 0.00 0.00 41.22 4.20
4266 7295 1.206371 ACCAAATAGGAGTTCCCGTCG 59.794 52.381 0.00 0.00 41.22 5.12
4267 7296 2.419713 GGACCAAATAGGAGTTCCCGTC 60.420 54.545 0.00 0.00 41.22 4.79
4268 7297 1.558294 GGACCAAATAGGAGTTCCCGT 59.442 52.381 0.00 0.00 41.22 5.28
4269 7298 1.472728 CGGACCAAATAGGAGTTCCCG 60.473 57.143 0.00 0.00 41.22 5.14
4270 7299 1.134189 CCGGACCAAATAGGAGTTCCC 60.134 57.143 0.00 0.00 41.22 3.97
4271 7300 1.746171 GCCGGACCAAATAGGAGTTCC 60.746 57.143 5.05 0.00 41.22 3.62
4272 7301 1.664873 GCCGGACCAAATAGGAGTTC 58.335 55.000 5.05 0.00 41.22 3.01
4273 7302 0.107848 CGCCGGACCAAATAGGAGTT 60.108 55.000 5.05 0.00 41.22 3.01
4274 7303 0.974010 TCGCCGGACCAAATAGGAGT 60.974 55.000 5.05 0.00 41.22 3.85
4275 7304 0.529992 GTCGCCGGACCAAATAGGAG 60.530 60.000 5.05 0.00 41.22 3.69
4276 7305 0.974010 AGTCGCCGGACCAAATAGGA 60.974 55.000 5.05 0.00 44.54 2.94
4277 7306 0.748450 TAGTCGCCGGACCAAATAGG 59.252 55.000 5.05 0.00 44.54 2.57
4278 7307 2.814280 ATAGTCGCCGGACCAAATAG 57.186 50.000 5.05 0.00 44.54 1.73
4279 7308 3.133362 AGAAATAGTCGCCGGACCAAATA 59.867 43.478 5.05 0.00 44.54 1.40
4280 7309 2.093128 AGAAATAGTCGCCGGACCAAAT 60.093 45.455 5.05 0.00 44.54 2.32
4281 7310 1.276989 AGAAATAGTCGCCGGACCAAA 59.723 47.619 5.05 0.00 44.54 3.28
4282 7311 0.899720 AGAAATAGTCGCCGGACCAA 59.100 50.000 5.05 0.00 44.54 3.67
4283 7312 0.458669 GAGAAATAGTCGCCGGACCA 59.541 55.000 5.05 0.00 44.54 4.02
4284 7313 0.594284 CGAGAAATAGTCGCCGGACC 60.594 60.000 5.05 0.00 44.54 4.46
4285 7314 2.869354 CGAGAAATAGTCGCCGGAC 58.131 57.895 5.05 0.00 43.76 4.79
4303 7332 0.248702 CCTCTCGACTCGCTTAAGGC 60.249 60.000 4.29 0.00 37.64 4.35
4304 7333 1.380524 TCCTCTCGACTCGCTTAAGG 58.619 55.000 4.29 0.00 0.00 2.69
4305 7334 3.119779 AGTTTCCTCTCGACTCGCTTAAG 60.120 47.826 0.00 0.00 0.00 1.85
4306 7335 2.818432 AGTTTCCTCTCGACTCGCTTAA 59.182 45.455 0.00 0.00 0.00 1.85
4307 7336 2.419324 GAGTTTCCTCTCGACTCGCTTA 59.581 50.000 0.00 0.00 34.69 3.09
4308 7337 1.200484 GAGTTTCCTCTCGACTCGCTT 59.800 52.381 0.00 0.00 34.69 4.68
4309 7338 0.806241 GAGTTTCCTCTCGACTCGCT 59.194 55.000 0.00 0.00 34.69 4.93
4310 7339 0.806241 AGAGTTTCCTCTCGACTCGC 59.194 55.000 0.00 0.00 45.08 5.03
4319 7348 3.546397 GCGCGCGAGAGTTTCCTC 61.546 66.667 37.18 7.60 38.04 3.71
4320 7349 3.575351 AAGCGCGCGAGAGTTTCCT 62.575 57.895 37.18 15.80 26.25 3.36
4321 7350 2.668280 AAAGCGCGCGAGAGTTTCC 61.668 57.895 37.18 13.39 32.59 3.13
4322 7351 1.507919 CAAAGCGCGCGAGAGTTTC 60.508 57.895 37.18 14.25 32.59 2.78
4323 7352 2.551270 CAAAGCGCGCGAGAGTTT 59.449 55.556 37.18 22.29 35.64 2.66
4324 7353 3.414700 CCAAAGCGCGCGAGAGTT 61.415 61.111 37.18 17.51 0.00 3.01
4325 7354 4.357947 TCCAAAGCGCGCGAGAGT 62.358 61.111 37.18 12.36 0.00 3.24
4326 7355 3.549150 CTCCAAAGCGCGCGAGAG 61.549 66.667 37.18 24.11 0.00 3.20
4329 7358 3.950794 ATTCCTCCAAAGCGCGCGA 62.951 57.895 37.18 15.96 0.00 5.87
4330 7359 3.440356 GATTCCTCCAAAGCGCGCG 62.440 63.158 28.44 28.44 0.00 6.86
4331 7360 2.405191 GATTCCTCCAAAGCGCGC 59.595 61.111 26.66 26.66 0.00 6.86
4332 7361 1.809619 TCGATTCCTCCAAAGCGCG 60.810 57.895 0.00 0.00 37.91 6.86
4333 7362 1.706287 GGTCGATTCCTCCAAAGCGC 61.706 60.000 0.00 0.00 37.91 5.92
4334 7363 1.090052 GGGTCGATTCCTCCAAAGCG 61.090 60.000 0.00 0.00 39.27 4.68
4335 7364 0.253327 AGGGTCGATTCCTCCAAAGC 59.747 55.000 4.66 0.00 0.00 3.51
4336 7365 2.014068 GCAGGGTCGATTCCTCCAAAG 61.014 57.143 7.24 0.00 31.06 2.77
4337 7366 0.035439 GCAGGGTCGATTCCTCCAAA 60.035 55.000 7.24 0.00 31.06 3.28
4338 7367 0.909610 AGCAGGGTCGATTCCTCCAA 60.910 55.000 7.24 0.00 31.06 3.53
4339 7368 1.306141 AGCAGGGTCGATTCCTCCA 60.306 57.895 7.24 0.00 31.06 3.86
4340 7369 1.443828 GAGCAGGGTCGATTCCTCC 59.556 63.158 7.24 0.00 31.06 4.30
4341 7370 1.066587 CGAGCAGGGTCGATTCCTC 59.933 63.158 15.10 4.06 42.85 3.71
4342 7371 3.082579 GCGAGCAGGGTCGATTCCT 62.083 63.158 23.21 4.66 42.85 3.36
4343 7372 2.586357 GCGAGCAGGGTCGATTCC 60.586 66.667 23.21 3.07 42.85 3.01
4344 7373 2.956964 CGCGAGCAGGGTCGATTC 60.957 66.667 23.21 6.07 42.85 2.52
4345 7374 3.417275 CTCGCGAGCAGGGTCGATT 62.417 63.158 25.07 0.00 42.85 3.34
4346 7375 3.893763 CTCGCGAGCAGGGTCGAT 61.894 66.667 25.07 0.00 42.85 3.59
4349 7378 4.803426 CCACTCGCGAGCAGGGTC 62.803 72.222 34.83 0.00 0.00 4.46
4352 7381 4.069232 TTCCCACTCGCGAGCAGG 62.069 66.667 34.83 32.51 0.00 4.85
4353 7382 2.811317 GTTCCCACTCGCGAGCAG 60.811 66.667 34.83 26.19 0.00 4.24
4354 7383 3.611674 TGTTCCCACTCGCGAGCA 61.612 61.111 34.83 20.63 0.00 4.26
4355 7384 3.112709 GTGTTCCCACTCGCGAGC 61.113 66.667 34.83 18.21 38.61 5.03
4356 7385 2.432628 GGTGTTCCCACTCGCGAG 60.433 66.667 33.45 33.45 41.53 5.03
4357 7386 4.351938 CGGTGTTCCCACTCGCGA 62.352 66.667 9.26 9.26 41.53 5.87
4360 7389 0.320073 TTTAGCGGTGTTCCCACTCG 60.320 55.000 0.00 0.00 41.53 4.18
4361 7390 1.439679 CTTTAGCGGTGTTCCCACTC 58.560 55.000 0.00 0.00 41.53 3.51
4362 7391 0.605589 GCTTTAGCGGTGTTCCCACT 60.606 55.000 0.00 0.00 41.53 4.00
4363 7392 1.873863 GCTTTAGCGGTGTTCCCAC 59.126 57.895 0.00 0.00 41.06 4.61
4364 7393 4.390048 GCTTTAGCGGTGTTCCCA 57.610 55.556 0.00 0.00 0.00 4.37
4374 7403 2.416893 GAGCACAGTGGTTAGCTTTAGC 59.583 50.000 6.72 0.00 37.48 3.09
4375 7404 2.668457 CGAGCACAGTGGTTAGCTTTAG 59.332 50.000 6.72 0.00 37.48 1.85
4376 7405 2.683968 CGAGCACAGTGGTTAGCTTTA 58.316 47.619 6.72 0.00 37.48 1.85
4377 7406 1.512926 CGAGCACAGTGGTTAGCTTT 58.487 50.000 6.72 0.00 37.48 3.51
4378 7407 0.951040 GCGAGCACAGTGGTTAGCTT 60.951 55.000 20.28 0.00 37.48 3.74
4379 7408 1.374758 GCGAGCACAGTGGTTAGCT 60.375 57.895 20.28 4.73 40.60 3.32
4380 7409 1.355066 GAGCGAGCACAGTGGTTAGC 61.355 60.000 20.09 20.09 33.98 3.09
4381 7410 0.737715 GGAGCGAGCACAGTGGTTAG 60.738 60.000 6.72 5.80 0.00 2.34
4382 7411 1.292223 GGAGCGAGCACAGTGGTTA 59.708 57.895 6.72 0.00 0.00 2.85
4383 7412 2.031163 GGAGCGAGCACAGTGGTT 59.969 61.111 6.72 0.00 0.00 3.67
4384 7413 4.008933 GGGAGCGAGCACAGTGGT 62.009 66.667 4.51 4.51 0.00 4.16
4385 7414 3.947132 CTGGGAGCGAGCACAGTGG 62.947 68.421 1.84 0.00 0.00 4.00
4386 7415 2.433838 CTGGGAGCGAGCACAGTG 60.434 66.667 0.00 0.00 0.00 3.66
4387 7416 1.185618 TAACTGGGAGCGAGCACAGT 61.186 55.000 6.99 6.99 45.34 3.55
4388 7417 0.737715 GTAACTGGGAGCGAGCACAG 60.738 60.000 5.76 5.76 37.01 3.66
4389 7418 1.185618 AGTAACTGGGAGCGAGCACA 61.186 55.000 0.00 0.00 0.00 4.57
4390 7419 0.815734 TAGTAACTGGGAGCGAGCAC 59.184 55.000 0.00 0.00 0.00 4.40
4391 7420 1.776662 ATAGTAACTGGGAGCGAGCA 58.223 50.000 0.00 0.00 0.00 4.26
4392 7421 2.892784 AATAGTAACTGGGAGCGAGC 57.107 50.000 0.00 0.00 0.00 5.03
4393 7422 5.517322 ACTAAATAGTAACTGGGAGCGAG 57.483 43.478 0.00 0.00 34.13 5.03
4394 7423 6.125029 ACTACTAAATAGTAACTGGGAGCGA 58.875 40.000 2.23 0.00 42.69 4.93
4395 7424 6.388435 ACTACTAAATAGTAACTGGGAGCG 57.612 41.667 2.23 0.00 42.69 5.03
4396 7425 7.723172 TCCTACTACTAAATAGTAACTGGGAGC 59.277 40.741 2.23 0.00 44.21 4.70
4397 7426 9.810870 ATCCTACTACTAAATAGTAACTGGGAG 57.189 37.037 12.06 4.29 44.21 4.30
4398 7427 9.804977 GATCCTACTACTAAATAGTAACTGGGA 57.195 37.037 10.19 10.19 44.21 4.37
4399 7428 8.728833 CGATCCTACTACTAAATAGTAACTGGG 58.271 40.741 2.23 2.67 44.21 4.45
4400 7429 8.235905 GCGATCCTACTACTAAATAGTAACTGG 58.764 40.741 2.23 4.64 44.21 4.00
4401 7430 7.956403 CGCGATCCTACTACTAAATAGTAACTG 59.044 40.741 0.00 0.00 44.21 3.16
4402 7431 7.875041 TCGCGATCCTACTACTAAATAGTAACT 59.125 37.037 3.71 0.00 44.21 2.24
4403 7432 7.954786 GTCGCGATCCTACTACTAAATAGTAAC 59.045 40.741 14.06 0.00 44.21 2.50
4404 7433 7.118390 GGTCGCGATCCTACTACTAAATAGTAA 59.882 40.741 14.06 0.00 44.21 2.24
4405 7434 6.591834 GGTCGCGATCCTACTACTAAATAGTA 59.408 42.308 14.06 0.71 42.69 1.82
4406 7435 5.411053 GGTCGCGATCCTACTACTAAATAGT 59.589 44.000 14.06 0.00 46.39 2.12
4407 7436 5.642919 AGGTCGCGATCCTACTACTAAATAG 59.357 44.000 23.11 0.00 36.89 1.73
4408 7437 5.555017 AGGTCGCGATCCTACTACTAAATA 58.445 41.667 23.11 0.00 33.04 1.40
4409 7438 4.396522 AGGTCGCGATCCTACTACTAAAT 58.603 43.478 23.11 0.00 33.04 1.40
4410 7439 3.813443 AGGTCGCGATCCTACTACTAAA 58.187 45.455 23.11 0.00 33.04 1.85
4411 7440 3.482156 AGGTCGCGATCCTACTACTAA 57.518 47.619 23.11 0.00 33.04 2.24
4418 7447 2.028294 CCTCTAGTAGGTCGCGATCCTA 60.028 54.545 24.40 24.40 40.94 2.94
4419 7448 1.270947 CCTCTAGTAGGTCGCGATCCT 60.271 57.143 26.03 26.03 40.94 3.24
4420 7449 1.158434 CCTCTAGTAGGTCGCGATCC 58.842 60.000 17.38 17.03 40.94 3.36
4430 7459 0.179051 ACTCCGGTCGCCTCTAGTAG 60.179 60.000 0.00 0.00 0.00 2.57
4431 7460 0.254178 AACTCCGGTCGCCTCTAGTA 59.746 55.000 0.00 0.00 0.00 1.82
4432 7461 1.001145 AACTCCGGTCGCCTCTAGT 60.001 57.895 0.00 0.00 0.00 2.57
4433 7462 1.433879 CAACTCCGGTCGCCTCTAG 59.566 63.158 0.00 0.00 0.00 2.43
4434 7463 2.050350 CCAACTCCGGTCGCCTCTA 61.050 63.158 0.00 0.00 0.00 2.43
4435 7464 2.776370 TACCAACTCCGGTCGCCTCT 62.776 60.000 0.00 0.00 40.67 3.69
4436 7465 1.673808 ATACCAACTCCGGTCGCCTC 61.674 60.000 0.00 0.00 40.67 4.70
4437 7466 1.262640 AATACCAACTCCGGTCGCCT 61.263 55.000 0.00 0.00 40.67 5.52
4438 7467 0.808847 GAATACCAACTCCGGTCGCC 60.809 60.000 0.00 0.00 40.67 5.54
4439 7468 0.175073 AGAATACCAACTCCGGTCGC 59.825 55.000 0.00 0.00 40.67 5.19
4440 7469 1.202382 GGAGAATACCAACTCCGGTCG 60.202 57.143 0.00 0.00 42.25 4.79
4441 7470 2.598686 GGAGAATACCAACTCCGGTC 57.401 55.000 0.00 0.00 42.25 4.79
4446 7475 7.929941 AAGAAAAGATGGAGAATACCAACTC 57.070 36.000 0.00 0.00 41.11 3.01
4447 7476 7.725844 ACAAAGAAAAGATGGAGAATACCAACT 59.274 33.333 0.00 0.00 43.21 3.16
4448 7477 7.886338 ACAAAGAAAAGATGGAGAATACCAAC 58.114 34.615 0.00 0.00 43.47 3.77
4449 7478 8.477419 AACAAAGAAAAGATGGAGAATACCAA 57.523 30.769 0.00 0.00 43.47 3.67
4450 7479 8.477419 AAACAAAGAAAAGATGGAGAATACCA 57.523 30.769 0.00 0.00 44.41 3.25
4451 7480 9.764363 AAAAACAAAGAAAAGATGGAGAATACC 57.236 29.630 0.00 0.00 0.00 2.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.