Multiple sequence alignment - TraesCS5D01G218400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G218400 chr5D 100.000 7999 0 0 1 7999 327466683 327474681 0.000000e+00 14772.0
1 TraesCS5D01G218400 chr5A 94.781 2146 82 17 661 2781 429251962 429249822 0.000000e+00 3315.0
2 TraesCS5D01G218400 chr5A 86.402 2015 155 56 3985 5940 429248469 429246515 0.000000e+00 2093.0
3 TraesCS5D01G218400 chr5A 92.402 1066 56 11 6349 7400 429246130 429245076 0.000000e+00 1496.0
4 TraesCS5D01G218400 chr5A 90.204 490 32 9 3015 3494 429249679 429249196 6.820000e-175 625.0
5 TraesCS5D01G218400 chr5A 83.685 521 46 17 3495 3982 429249041 429248527 9.460000e-124 455.0
6 TraesCS5D01G218400 chr5A 87.302 315 27 7 1 311 429256759 429256454 1.650000e-91 348.0
7 TraesCS5D01G218400 chr5A 95.392 217 10 0 6098 6314 429246342 429246126 5.940000e-91 346.0
8 TraesCS5D01G218400 chr5A 90.226 133 7 6 384 514 429256426 429256298 1.380000e-37 169.0
9 TraesCS5D01G218400 chr5A 94.828 58 3 0 6008 6065 429246492 429246435 3.070000e-14 91.6
10 TraesCS5D01G218400 chr5B 91.792 1194 53 18 5203 6377 380317966 380319133 0.000000e+00 1620.0
11 TraesCS5D01G218400 chr5B 90.423 1159 47 19 3495 4612 380316192 380317327 0.000000e+00 1467.0
12 TraesCS5D01G218400 chr5B 89.804 971 77 11 1521 2479 380313590 380314550 0.000000e+00 1225.0
13 TraesCS5D01G218400 chr5B 93.805 791 36 11 633 1417 380312808 380313591 0.000000e+00 1177.0
14 TraesCS5D01G218400 chr5B 89.949 786 52 11 6585 7358 380319351 380320121 0.000000e+00 989.0
15 TraesCS5D01G218400 chr5B 97.112 554 16 0 4650 5203 380317326 380317879 0.000000e+00 935.0
16 TraesCS5D01G218400 chr5B 93.763 481 21 5 3015 3494 380315567 380316039 0.000000e+00 713.0
17 TraesCS5D01G218400 chr5B 93.079 419 6 3 2470 2865 380315143 380315561 6.910000e-165 592.0
18 TraesCS5D01G218400 chr5B 89.968 309 19 7 1 305 380312220 380312520 9.730000e-104 388.0
19 TraesCS5D01G218400 chr5B 92.655 177 7 2 6403 6577 380319131 380319303 4.790000e-62 250.0
20 TraesCS5D01G218400 chr5B 98.182 55 1 0 2865 2919 130594038 130593984 6.610000e-16 97.1
21 TraesCS5D01G218400 chr5B 98.182 55 1 0 2865 2919 130644618 130644672 6.610000e-16 97.1
22 TraesCS5D01G218400 chr4D 92.630 597 40 4 7407 7999 489165540 489164944 0.000000e+00 856.0
23 TraesCS5D01G218400 chr4D 98.182 55 1 0 2865 2919 241392329 241392275 6.610000e-16 97.1
24 TraesCS5D01G218400 chr7D 91.823 587 45 2 7416 7999 572313636 572314222 0.000000e+00 815.0
25 TraesCS5D01G218400 chr7D 91.781 584 47 1 7416 7998 381004838 381004255 0.000000e+00 811.0
26 TraesCS5D01G218400 chr7D 96.970 99 3 0 2919 3017 203530575 203530673 4.970000e-37 167.0
27 TraesCS5D01G218400 chr7D 96.970 99 3 0 2919 3017 381882413 381882511 4.970000e-37 167.0
28 TraesCS5D01G218400 chr7D 92.857 42 3 0 355 396 540612723 540612764 2.410000e-05 62.1
29 TraesCS5D01G218400 chr6D 91.667 588 44 3 7416 7998 464696089 464696676 0.000000e+00 809.0
30 TraesCS5D01G218400 chr6D 91.409 582 48 2 7416 7995 340195627 340196208 0.000000e+00 797.0
31 TraesCS5D01G218400 chr6D 91.282 585 48 3 7416 7998 313020476 313021059 0.000000e+00 795.0
32 TraesCS5D01G218400 chr6D 98.182 55 1 0 2865 2919 108506605 108506659 6.610000e-16 97.1
33 TraesCS5D01G218400 chr3D 91.327 588 46 3 7416 7998 109275065 109274478 0.000000e+00 798.0
34 TraesCS5D01G218400 chr2D 91.111 585 50 2 7416 7998 531683384 531682800 0.000000e+00 791.0
35 TraesCS5D01G218400 chr2D 96.970 99 3 0 2919 3017 635018702 635018604 4.970000e-37 167.0
36 TraesCS5D01G218400 chrUn 90.986 588 49 2 7416 7999 228914584 228913997 0.000000e+00 789.0
37 TraesCS5D01G218400 chrUn 96.970 99 3 0 2919 3017 223715143 223715045 4.970000e-37 167.0
38 TraesCS5D01G218400 chrUn 96.970 99 3 0 2919 3017 257855979 257856077 4.970000e-37 167.0
39 TraesCS5D01G218400 chrUn 98.182 55 1 0 2865 2919 45084144 45084090 6.610000e-16 97.1
40 TraesCS5D01G218400 chrUn 98.182 55 1 0 2865 2919 182461707 182461761 6.610000e-16 97.1
41 TraesCS5D01G218400 chrUn 98.182 55 1 0 2865 2919 186158266 186158212 6.610000e-16 97.1
42 TraesCS5D01G218400 chr3B 96.970 99 3 0 2919 3017 201606294 201606392 4.970000e-37 167.0
43 TraesCS5D01G218400 chr2B 96.970 99 3 0 2919 3017 357580337 357580239 4.970000e-37 167.0
44 TraesCS5D01G218400 chr1B 96.970 99 3 0 2919 3017 638719972 638720070 4.970000e-37 167.0
45 TraesCS5D01G218400 chr1A 96.970 99 3 0 2919 3017 94599364 94599462 4.970000e-37 167.0
46 TraesCS5D01G218400 chr1A 98.182 55 1 0 2865 2919 68933960 68934014 6.610000e-16 97.1
47 TraesCS5D01G218400 chr1D 98.182 55 1 0 2865 2919 204062513 204062567 6.610000e-16 97.1
48 TraesCS5D01G218400 chr4B 81.395 86 13 3 354 439 548102054 548102136 5.180000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G218400 chr5D 327466683 327474681 7998 False 14772.000000 14772 100.000000 1 7999 1 chr5D.!!$F1 7998
1 TraesCS5D01G218400 chr5A 429245076 429251962 6886 True 1203.085714 3315 91.099143 661 7400 7 chr5A.!!$R1 6739
2 TraesCS5D01G218400 chr5B 380312220 380320121 7901 False 935.600000 1620 92.235000 1 7358 10 chr5B.!!$F2 7357
3 TraesCS5D01G218400 chr4D 489164944 489165540 596 True 856.000000 856 92.630000 7407 7999 1 chr4D.!!$R2 592
4 TraesCS5D01G218400 chr7D 572313636 572314222 586 False 815.000000 815 91.823000 7416 7999 1 chr7D.!!$F4 583
5 TraesCS5D01G218400 chr7D 381004255 381004838 583 True 811.000000 811 91.781000 7416 7998 1 chr7D.!!$R1 582
6 TraesCS5D01G218400 chr6D 464696089 464696676 587 False 809.000000 809 91.667000 7416 7998 1 chr6D.!!$F4 582
7 TraesCS5D01G218400 chr6D 340195627 340196208 581 False 797.000000 797 91.409000 7416 7995 1 chr6D.!!$F3 579
8 TraesCS5D01G218400 chr6D 313020476 313021059 583 False 795.000000 795 91.282000 7416 7998 1 chr6D.!!$F2 582
9 TraesCS5D01G218400 chr3D 109274478 109275065 587 True 798.000000 798 91.327000 7416 7998 1 chr3D.!!$R1 582
10 TraesCS5D01G218400 chr2D 531682800 531683384 584 True 791.000000 791 91.111000 7416 7998 1 chr2D.!!$R1 582
11 TraesCS5D01G218400 chrUn 228913997 228914584 587 True 789.000000 789 90.986000 7416 7999 1 chrUn.!!$R4 583

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
549 554 0.027324 GGGTCGTCGAGCGTAGTTAG 59.973 60.0 17.46 0.00 42.13 2.34 F
1335 1388 0.035439 ATGGCTGTAAGTTCCACGGG 60.035 55.0 0.00 0.00 35.30 5.28 F
2077 2149 0.036671 GGAAGTAGGAACCACCCACG 60.037 60.0 0.00 0.00 40.05 4.94 F
2972 3705 0.036765 TATGGACTGGACGGTTGTGC 60.037 55.0 0.00 0.00 36.89 4.57 F
3002 3735 0.395311 ACTGACTCGCTTATCCCCGA 60.395 55.0 0.00 0.00 0.00 5.14 F
3008 3741 0.458669 TCGCTTATCCCCGAGAACAC 59.541 55.0 0.00 0.00 0.00 3.32 F
3009 3742 0.529992 CGCTTATCCCCGAGAACACC 60.530 60.0 0.00 0.00 0.00 4.16 F
4644 5640 0.317938 GTAGCTGCGTGGATCTACGG 60.318 60.0 29.35 16.72 43.87 4.02 F
5080 6076 0.717784 CACTGCACACTACTGCATCG 59.282 55.0 0.00 0.00 46.05 3.84 F
6468 7664 0.899019 TGCACATGCTCATTGCCATT 59.101 45.0 5.31 0.00 42.66 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2077 2149 0.972983 TAGCTCAGACAGTGGGAGGC 60.973 60.000 0.00 1.38 0.00 4.70 R
2953 3686 0.036765 GCACAACCGTCCAGTCCATA 60.037 55.000 0.00 0.00 0.00 2.74 R
2985 3718 0.106868 TCTCGGGGATAAGCGAGTCA 60.107 55.000 0.00 0.00 0.00 3.41 R
4617 5613 1.067425 TCCACGCAGCTACGTAAATGT 60.067 47.619 12.49 0.00 46.34 2.71 R
4630 5626 3.131577 AGATTTTACCGTAGATCCACGCA 59.868 43.478 8.26 0.00 40.59 5.24 R
4632 5628 4.928601 TCAGATTTTACCGTAGATCCACG 58.071 43.478 6.71 6.71 41.59 4.94 R
4717 5713 5.464168 CCACTAAGTTCAAGAAGGCATTTG 58.536 41.667 0.00 0.00 0.00 2.32 R
5613 6726 1.482593 AGCTCTCTGGGTTATGGAACG 59.517 52.381 0.00 0.00 36.32 3.95 R
6992 8246 0.798776 CTTCAGCACCAAACTAGCCG 59.201 55.000 0.00 0.00 0.00 5.52 R
7326 8584 0.736325 CAACGACCTGAAGGCTACGG 60.736 60.000 13.04 0.00 39.32 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 2.234661 TGATCACACTGATGAGTCACCC 59.765 50.000 0.00 0.00 37.20 4.61
66 67 5.399052 TGCCTAGTACTACTCCTATTGGT 57.601 43.478 0.00 0.00 34.23 3.67
78 79 1.405105 CCTATTGGTTTCGTGGCATGG 59.595 52.381 6.90 0.00 0.00 3.66
79 80 0.814457 TATTGGTTTCGTGGCATGGC 59.186 50.000 13.29 13.29 0.00 4.40
81 82 1.184322 TTGGTTTCGTGGCATGGCAT 61.184 50.000 26.07 0.00 0.00 4.40
82 83 1.153784 GGTTTCGTGGCATGGCATG 60.154 57.895 30.31 30.31 0.00 4.06
85 86 2.778055 TTTCGTGGCATGGCATGGGA 62.778 55.000 33.59 23.57 0.00 4.37
86 87 3.520862 CGTGGCATGGCATGGGAC 61.521 66.667 28.97 14.11 0.00 4.46
120 121 3.092301 CCATGATATCCTACGGAGCAGA 58.908 50.000 0.00 0.00 34.05 4.26
121 122 3.511540 CCATGATATCCTACGGAGCAGAA 59.488 47.826 0.00 0.00 34.05 3.02
147 148 2.045561 TTTCACACACGTGGATGGTT 57.954 45.000 21.57 0.00 43.79 3.67
148 149 1.588674 TTCACACACGTGGATGGTTC 58.411 50.000 21.57 0.00 43.79 3.62
149 150 0.250124 TCACACACGTGGATGGTTCC 60.250 55.000 21.57 0.00 43.79 3.62
150 151 1.072505 ACACACGTGGATGGTTCCC 59.927 57.895 21.57 0.00 41.83 3.97
151 152 1.374947 CACACGTGGATGGTTCCCT 59.625 57.895 21.57 0.00 41.83 4.20
153 154 1.447838 CACGTGGATGGTTCCCTCG 60.448 63.158 7.95 0.00 41.83 4.63
154 155 1.608336 ACGTGGATGGTTCCCTCGA 60.608 57.895 10.05 0.00 41.83 4.04
155 156 1.141881 CGTGGATGGTTCCCTCGAG 59.858 63.158 5.13 5.13 41.83 4.04
159 163 2.092914 GTGGATGGTTCCCTCGAGAAAT 60.093 50.000 15.71 0.00 41.83 2.17
195 199 7.759465 TCACTTTCCGAAGAACACTATACTAG 58.241 38.462 0.00 0.00 36.69 2.57
206 210 8.057536 AGAACACTATACTAGACAGAAGTTGG 57.942 38.462 0.00 0.00 0.00 3.77
207 211 7.670559 AGAACACTATACTAGACAGAAGTTGGT 59.329 37.037 0.00 0.00 0.00 3.67
231 236 2.756760 GGAAGATGAGCCATTCTTTGCA 59.243 45.455 0.00 0.00 0.00 4.08
242 247 1.298157 TTCTTTGCACGCTCCGATGG 61.298 55.000 0.00 0.00 0.00 3.51
265 270 4.051922 GCGATGGTTATCTTGTAGACCAG 58.948 47.826 0.00 0.00 44.64 4.00
291 296 2.656947 TGCTTGCTACTTCCACCTTT 57.343 45.000 0.00 0.00 0.00 3.11
293 298 2.158682 TGCTTGCTACTTCCACCTTTCA 60.159 45.455 0.00 0.00 0.00 2.69
305 310 8.934023 ACTTCCACCTTTCACTCATATTTTAA 57.066 30.769 0.00 0.00 0.00 1.52
306 311 9.014297 ACTTCCACCTTTCACTCATATTTTAAG 57.986 33.333 0.00 0.00 0.00 1.85
307 312 8.934023 TTCCACCTTTCACTCATATTTTAAGT 57.066 30.769 0.00 0.00 0.00 2.24
308 313 8.934023 TCCACCTTTCACTCATATTTTAAGTT 57.066 30.769 0.00 0.00 0.00 2.66
334 339 5.596836 TGTTTTCTCAAGTTTGGATTGCT 57.403 34.783 0.00 0.00 0.00 3.91
335 340 5.976458 TGTTTTCTCAAGTTTGGATTGCTT 58.024 33.333 0.00 0.00 0.00 3.91
336 341 7.106439 TGTTTTCTCAAGTTTGGATTGCTTA 57.894 32.000 0.00 0.00 0.00 3.09
337 342 6.978080 TGTTTTCTCAAGTTTGGATTGCTTAC 59.022 34.615 0.00 0.00 0.00 2.34
338 343 5.705609 TTCTCAAGTTTGGATTGCTTACC 57.294 39.130 0.00 0.00 0.00 2.85
339 344 4.724399 TCTCAAGTTTGGATTGCTTACCA 58.276 39.130 0.00 0.00 0.00 3.25
340 345 4.518970 TCTCAAGTTTGGATTGCTTACCAC 59.481 41.667 0.00 0.00 35.81 4.16
341 346 3.252215 TCAAGTTTGGATTGCTTACCACG 59.748 43.478 0.00 0.00 35.81 4.94
343 348 3.482436 AGTTTGGATTGCTTACCACGAA 58.518 40.909 0.00 0.00 35.81 3.85
344 349 4.079253 AGTTTGGATTGCTTACCACGAAT 58.921 39.130 0.00 0.00 35.81 3.34
345 350 5.250200 AGTTTGGATTGCTTACCACGAATA 58.750 37.500 0.00 0.00 35.81 1.75
346 351 5.123344 AGTTTGGATTGCTTACCACGAATAC 59.877 40.000 0.00 0.00 35.81 1.89
347 352 3.537580 TGGATTGCTTACCACGAATACC 58.462 45.455 0.00 0.00 0.00 2.73
348 353 3.055021 TGGATTGCTTACCACGAATACCA 60.055 43.478 0.00 0.00 0.00 3.25
349 354 3.311596 GGATTGCTTACCACGAATACCAC 59.688 47.826 0.00 0.00 0.00 4.16
350 355 3.404224 TTGCTTACCACGAATACCACA 57.596 42.857 0.00 0.00 0.00 4.17
351 356 3.620427 TGCTTACCACGAATACCACAT 57.380 42.857 0.00 0.00 0.00 3.21
353 358 2.612212 GCTTACCACGAATACCACATGG 59.388 50.000 0.00 0.00 42.17 3.66
420 425 8.479313 TGCGAGATATATTATGCTACAAAAGG 57.521 34.615 0.00 0.00 0.00 3.11
422 427 9.582431 GCGAGATATATTATGCTACAAAAGGTA 57.418 33.333 0.00 0.00 0.00 3.08
450 455 8.408043 TCATTGGATTTGTACTTGAAAGATGT 57.592 30.769 0.00 0.00 0.00 3.06
451 456 8.859090 TCATTGGATTTGTACTTGAAAGATGTT 58.141 29.630 0.00 0.00 0.00 2.71
452 457 9.480053 CATTGGATTTGTACTTGAAAGATGTTT 57.520 29.630 0.00 0.00 0.00 2.83
453 458 9.696917 ATTGGATTTGTACTTGAAAGATGTTTC 57.303 29.630 8.35 8.35 42.27 2.78
525 530 2.435685 AAACATAAATCACTCGCGCG 57.564 45.000 26.76 26.76 0.00 6.86
526 531 1.635844 AACATAAATCACTCGCGCGA 58.364 45.000 32.60 32.60 0.00 5.87
540 545 3.878519 GCGAGAGGGGTCGTCGAG 61.879 72.222 0.00 0.00 42.17 4.04
541 546 3.878519 CGAGAGGGGTCGTCGAGC 61.879 72.222 15.95 15.95 35.70 5.03
542 547 3.878519 GAGAGGGGTCGTCGAGCG 61.879 72.222 17.46 0.00 43.01 5.03
543 548 4.719106 AGAGGGGTCGTCGAGCGT 62.719 66.667 17.46 7.90 42.13 5.07
544 549 2.821366 GAGGGGTCGTCGAGCGTA 60.821 66.667 17.46 0.00 42.13 4.42
545 550 2.821688 GAGGGGTCGTCGAGCGTAG 61.822 68.421 17.46 0.00 42.13 3.51
546 551 3.130160 GGGGTCGTCGAGCGTAGT 61.130 66.667 17.46 0.00 42.13 2.73
549 554 0.027324 GGGTCGTCGAGCGTAGTTAG 59.973 60.000 17.46 0.00 42.13 2.34
552 557 2.413371 GGTCGTCGAGCGTAGTTAGTTT 60.413 50.000 8.91 0.00 42.13 2.66
577 583 7.712204 TTTCTACCCCATAATTTTCCTCAAC 57.288 36.000 0.00 0.00 0.00 3.18
580 586 5.010708 ACCCCATAATTTTCCTCAACTGT 57.989 39.130 0.00 0.00 0.00 3.55
629 636 5.170748 GCCCAATTCATTTCTTACAAGGTG 58.829 41.667 0.00 0.00 0.00 4.00
732 770 2.783832 GACGTGCAAAGCTGAAAAGTTC 59.216 45.455 0.00 0.00 0.00 3.01
733 771 2.119457 CGTGCAAAGCTGAAAAGTTCC 58.881 47.619 0.00 0.00 0.00 3.62
880 924 3.974642 ACTCCACCTCCCACCTATAAATC 59.025 47.826 0.00 0.00 0.00 2.17
895 939 2.978452 AAATCTCCTCATCGCCGCCG 62.978 60.000 0.00 0.00 0.00 6.46
914 966 1.975407 TTCCTCGTCCCGTCCTCAC 60.975 63.158 0.00 0.00 0.00 3.51
915 967 2.361357 CCTCGTCCCGTCCTCACT 60.361 66.667 0.00 0.00 0.00 3.41
916 968 2.408241 CCTCGTCCCGTCCTCACTC 61.408 68.421 0.00 0.00 0.00 3.51
997 1049 4.278513 CCAGAACCAACCCGCCCA 62.279 66.667 0.00 0.00 0.00 5.36
1206 1259 1.533731 GTGTTCTCGGCGGATTTTGAA 59.466 47.619 7.21 0.00 0.00 2.69
1210 1263 1.209504 TCTCGGCGGATTTTGAAGGAT 59.790 47.619 7.21 0.00 0.00 3.24
1211 1264 2.017049 CTCGGCGGATTTTGAAGGATT 58.983 47.619 7.21 0.00 0.00 3.01
1214 1267 2.923020 CGGCGGATTTTGAAGGATTTTG 59.077 45.455 0.00 0.00 0.00 2.44
1335 1388 0.035439 ATGGCTGTAAGTTCCACGGG 60.035 55.000 0.00 0.00 35.30 5.28
1420 1473 0.250553 CTGTGCTTTCCCCGTTACCA 60.251 55.000 0.00 0.00 0.00 3.25
1428 1481 0.609681 TCCCCGTTACCACCAAATGC 60.610 55.000 0.00 0.00 0.00 3.56
1456 1509 2.783135 TCTAGTCCCTTGCAGCTTTTG 58.217 47.619 0.00 0.00 0.00 2.44
1471 1524 5.277047 CAGCTTTTGAGTTTTCAGGAAGTC 58.723 41.667 0.00 0.00 33.93 3.01
1474 1527 4.900635 TTTGAGTTTTCAGGAAGTCTGC 57.099 40.909 0.00 0.00 43.06 4.26
1501 1561 3.644884 ACTGTTCACGAGTTGGTAGAG 57.355 47.619 0.00 0.00 0.00 2.43
1525 1585 5.163374 GGCTTTATGGGCTCTCATTTTGATT 60.163 40.000 0.00 0.00 0.00 2.57
1526 1586 6.040842 GGCTTTATGGGCTCTCATTTTGATTA 59.959 38.462 0.00 0.00 0.00 1.75
1638 1699 2.936919 TCACACTGCAATTCAGAGGT 57.063 45.000 10.61 6.56 45.72 3.85
1849 1918 0.322456 TCCAGATTCCGGCACCAAAG 60.322 55.000 0.00 0.00 0.00 2.77
2007 2078 3.157087 CCTTGGAAGTAGGCACACAAAT 58.843 45.455 0.00 0.00 0.00 2.32
2022 2093 8.306761 AGGCACACAAATTTTAAGATAAAGAGG 58.693 33.333 0.00 0.00 0.00 3.69
2065 2137 5.246429 GGGGGTTCAGATACATAGGAAGTAG 59.754 48.000 0.00 0.00 0.00 2.57
2077 2149 0.036671 GGAAGTAGGAACCACCCACG 60.037 60.000 0.00 0.00 40.05 4.94
2087 2159 4.704833 CACCCACGCCTCCCACTG 62.705 72.222 0.00 0.00 0.00 3.66
2121 2193 4.080863 GCTCAATTCCTAAGGAGGTTCAGA 60.081 45.833 0.00 0.00 44.19 3.27
2150 2222 1.688772 AATTGCTGCTAGGCCATCAG 58.311 50.000 5.01 10.09 0.00 2.90
2164 2236 2.482839 GCCATCAGTAGAAGCCTCAGAC 60.483 54.545 0.00 0.00 0.00 3.51
2212 2284 7.040686 ACACATGTTTATGTTCCTGTTTAGGAC 60.041 37.037 0.00 0.00 45.53 3.85
2241 2314 8.374327 AGTTACTTGTTATTCGCTAAAACTGT 57.626 30.769 0.00 0.00 0.00 3.55
2301 2375 4.513442 TGCAACCTAGCCAATTAGTACAG 58.487 43.478 0.00 0.00 0.00 2.74
2355 2429 4.827284 AGGGAGTGGTTTCTTGTTGTTATG 59.173 41.667 0.00 0.00 0.00 1.90
2865 3598 8.054152 ACATGTTGCATTACATTCTGTATGAA 57.946 30.769 1.14 0.00 36.64 2.57
2866 3599 7.970061 ACATGTTGCATTACATTCTGTATGAAC 59.030 33.333 1.14 0.00 36.64 3.18
2868 3601 7.751732 TGTTGCATTACATTCTGTATGAACTC 58.248 34.615 1.04 0.00 37.52 3.01
2869 3602 7.607607 TGTTGCATTACATTCTGTATGAACTCT 59.392 33.333 1.04 0.00 37.52 3.24
2870 3603 8.454106 GTTGCATTACATTCTGTATGAACTCTT 58.546 33.333 1.04 0.00 37.52 2.85
2871 3604 8.201554 TGCATTACATTCTGTATGAACTCTTC 57.798 34.615 1.04 0.00 37.52 2.87
2872 3605 7.010460 TGCATTACATTCTGTATGAACTCTTCG 59.990 37.037 1.04 0.00 37.52 3.79
2873 3606 7.222805 GCATTACATTCTGTATGAACTCTTCGA 59.777 37.037 1.04 0.00 37.52 3.71
2874 3607 9.254133 CATTACATTCTGTATGAACTCTTCGAT 57.746 33.333 1.04 0.00 37.52 3.59
2877 3610 8.809159 ACATTCTGTATGAACTCTTCGATATG 57.191 34.615 1.04 0.00 37.52 1.78
2878 3611 7.383572 ACATTCTGTATGAACTCTTCGATATGC 59.616 37.037 1.04 0.00 37.52 3.14
2879 3612 5.452777 TCTGTATGAACTCTTCGATATGCG 58.547 41.667 0.00 0.00 42.69 4.73
2880 3613 3.981416 TGTATGAACTCTTCGATATGCGC 59.019 43.478 0.00 0.00 40.61 6.09
2881 3614 2.871182 TGAACTCTTCGATATGCGCT 57.129 45.000 9.73 0.00 40.61 5.92
2882 3615 3.982576 TGAACTCTTCGATATGCGCTA 57.017 42.857 9.73 0.00 40.61 4.26
2883 3616 3.890128 TGAACTCTTCGATATGCGCTAG 58.110 45.455 9.73 0.00 40.61 3.42
2884 3617 2.339728 ACTCTTCGATATGCGCTAGC 57.660 50.000 9.73 4.06 45.41 3.42
2885 3618 1.883275 ACTCTTCGATATGCGCTAGCT 59.117 47.619 13.93 0.00 45.42 3.32
2886 3619 3.075148 ACTCTTCGATATGCGCTAGCTA 58.925 45.455 13.93 1.70 45.42 3.32
2887 3620 3.126171 ACTCTTCGATATGCGCTAGCTAG 59.874 47.826 16.84 16.84 45.42 3.42
2888 3621 2.420372 TCTTCGATATGCGCTAGCTAGG 59.580 50.000 22.10 12.96 45.42 3.02
2889 3622 1.822506 TCGATATGCGCTAGCTAGGT 58.177 50.000 22.10 0.00 45.42 3.08
2890 3623 2.981898 TCGATATGCGCTAGCTAGGTA 58.018 47.619 22.10 11.89 45.42 3.08
2891 3624 3.340928 TCGATATGCGCTAGCTAGGTAA 58.659 45.455 22.10 6.16 45.42 2.85
2892 3625 3.945921 TCGATATGCGCTAGCTAGGTAAT 59.054 43.478 22.10 11.87 45.42 1.89
2893 3626 4.035324 TCGATATGCGCTAGCTAGGTAATC 59.965 45.833 22.10 13.80 45.42 1.75
2894 3627 4.612943 GATATGCGCTAGCTAGGTAATCC 58.387 47.826 22.10 3.45 45.42 3.01
2895 3628 0.966920 TGCGCTAGCTAGGTAATCCC 59.033 55.000 22.10 2.73 45.42 3.85
2896 3629 1.480683 TGCGCTAGCTAGGTAATCCCT 60.481 52.381 22.10 0.00 45.42 4.20
2897 3630 1.619332 GCGCTAGCTAGGTAATCCCTT 59.381 52.381 22.10 0.00 45.40 3.95
2898 3631 2.037381 GCGCTAGCTAGGTAATCCCTTT 59.963 50.000 22.10 0.00 45.40 3.11
2899 3632 3.257624 GCGCTAGCTAGGTAATCCCTTTA 59.742 47.826 22.10 0.00 45.40 1.85
2900 3633 4.807443 CGCTAGCTAGGTAATCCCTTTAC 58.193 47.826 22.10 0.00 42.73 2.01
2901 3634 4.523558 CGCTAGCTAGGTAATCCCTTTACT 59.476 45.833 22.10 0.00 42.73 2.24
2902 3635 5.010820 CGCTAGCTAGGTAATCCCTTTACTT 59.989 44.000 22.10 0.00 42.73 2.24
2903 3636 6.208204 CGCTAGCTAGGTAATCCCTTTACTTA 59.792 42.308 22.10 0.00 42.73 2.24
2904 3637 7.255730 CGCTAGCTAGGTAATCCCTTTACTTAA 60.256 40.741 22.10 0.00 42.73 1.85
2905 3638 8.595421 GCTAGCTAGGTAATCCCTTTACTTAAT 58.405 37.037 22.10 0.00 42.73 1.40
2907 3640 8.800515 AGCTAGGTAATCCCTTTACTTAATCT 57.199 34.615 0.00 0.00 42.73 2.40
2908 3641 9.893975 AGCTAGGTAATCCCTTTACTTAATCTA 57.106 33.333 0.00 0.00 42.73 1.98
2919 3652 9.907229 CCCTTTACTTAATCTAATATGGGATCC 57.093 37.037 1.92 1.92 31.98 3.36
2923 3656 9.629649 TTACTTAATCTAATATGGGATCCACCT 57.370 33.333 15.23 0.00 35.80 4.00
2925 3658 9.047947 ACTTAATCTAATATGGGATCCACCTAC 57.952 37.037 15.23 0.00 35.80 3.18
2926 3659 9.273137 CTTAATCTAATATGGGATCCACCTACT 57.727 37.037 15.23 0.00 35.80 2.57
2927 3660 7.502060 AATCTAATATGGGATCCACCTACTG 57.498 40.000 15.23 0.00 35.80 2.74
2928 3661 6.227624 TCTAATATGGGATCCACCTACTGA 57.772 41.667 15.23 1.11 35.80 3.41
2929 3662 6.815880 TCTAATATGGGATCCACCTACTGAT 58.184 40.000 15.23 0.00 35.80 2.90
2930 3663 7.950803 TCTAATATGGGATCCACCTACTGATA 58.049 38.462 15.23 0.00 35.80 2.15
2931 3664 8.578376 TCTAATATGGGATCCACCTACTGATAT 58.422 37.037 15.23 0.00 35.80 1.63
2932 3665 7.443302 AATATGGGATCCACCTACTGATATG 57.557 40.000 15.23 0.00 35.80 1.78
2933 3666 4.485653 TGGGATCCACCTACTGATATGA 57.514 45.455 15.23 0.00 38.98 2.15
2934 3667 5.028678 TGGGATCCACCTACTGATATGAT 57.971 43.478 15.23 0.00 38.98 2.45
2935 3668 5.415065 TGGGATCCACCTACTGATATGATT 58.585 41.667 15.23 0.00 38.98 2.57
2936 3669 5.249163 TGGGATCCACCTACTGATATGATTG 59.751 44.000 15.23 0.00 38.98 2.67
2937 3670 5.485353 GGGATCCACCTACTGATATGATTGA 59.515 44.000 15.23 0.00 38.98 2.57
2938 3671 6.157645 GGGATCCACCTACTGATATGATTGAT 59.842 42.308 15.23 0.00 38.98 2.57
2939 3672 7.311549 GGGATCCACCTACTGATATGATTGATT 60.312 40.741 15.23 0.00 38.98 2.57
2940 3673 8.762645 GGATCCACCTACTGATATGATTGATTA 58.237 37.037 6.95 0.00 35.41 1.75
2943 3676 9.325248 TCCACCTACTGATATGATTGATTATGA 57.675 33.333 0.00 0.00 0.00 2.15
2944 3677 9.376075 CCACCTACTGATATGATTGATTATGAC 57.624 37.037 0.00 0.00 0.00 3.06
2945 3678 9.933723 CACCTACTGATATGATTGATTATGACA 57.066 33.333 0.00 0.00 0.00 3.58
2964 3697 7.807977 ATGACAATTATTGTATGGACTGGAC 57.192 36.000 10.82 0.00 45.52 4.02
2965 3698 5.815222 TGACAATTATTGTATGGACTGGACG 59.185 40.000 10.82 0.00 45.52 4.79
2966 3699 5.123227 ACAATTATTGTATGGACTGGACGG 58.877 41.667 9.02 0.00 43.27 4.79
2967 3700 5.123227 CAATTATTGTATGGACTGGACGGT 58.877 41.667 0.00 0.00 0.00 4.83
2968 3701 4.829872 TTATTGTATGGACTGGACGGTT 57.170 40.909 0.00 0.00 0.00 4.44
2969 3702 2.465860 TTGTATGGACTGGACGGTTG 57.534 50.000 0.00 0.00 0.00 3.77
2970 3703 1.344065 TGTATGGACTGGACGGTTGT 58.656 50.000 0.00 0.00 0.00 3.32
2971 3704 1.001520 TGTATGGACTGGACGGTTGTG 59.998 52.381 0.00 0.00 0.00 3.33
2972 3705 0.036765 TATGGACTGGACGGTTGTGC 60.037 55.000 0.00 0.00 36.89 4.57
2973 3706 2.050836 ATGGACTGGACGGTTGTGCA 62.051 55.000 6.55 6.55 44.86 4.57
2974 3707 1.525077 GGACTGGACGGTTGTGCAA 60.525 57.895 0.00 0.00 46.37 4.08
2975 3708 1.647084 GACTGGACGGTTGTGCAAC 59.353 57.895 6.52 6.52 46.37 4.17
2988 3721 2.875080 GTGCAACCGATTGTACTGAC 57.125 50.000 3.12 0.00 45.15 3.51
2989 3722 2.413837 GTGCAACCGATTGTACTGACT 58.586 47.619 3.12 0.00 45.15 3.41
2990 3723 2.412089 GTGCAACCGATTGTACTGACTC 59.588 50.000 3.12 0.00 45.15 3.36
2991 3724 1.654105 GCAACCGATTGTACTGACTCG 59.346 52.381 0.00 0.00 38.17 4.18
2992 3725 1.654105 CAACCGATTGTACTGACTCGC 59.346 52.381 0.00 0.00 0.00 5.03
2993 3726 1.174783 ACCGATTGTACTGACTCGCT 58.825 50.000 0.00 0.00 0.00 4.93
2994 3727 1.544691 ACCGATTGTACTGACTCGCTT 59.455 47.619 0.00 0.00 0.00 4.68
2995 3728 2.751259 ACCGATTGTACTGACTCGCTTA 59.249 45.455 0.00 0.00 0.00 3.09
2996 3729 3.380637 ACCGATTGTACTGACTCGCTTAT 59.619 43.478 0.00 0.00 0.00 1.73
2997 3730 3.975670 CCGATTGTACTGACTCGCTTATC 59.024 47.826 0.00 0.00 0.00 1.75
2998 3731 3.975670 CGATTGTACTGACTCGCTTATCC 59.024 47.826 0.00 0.00 0.00 2.59
2999 3732 3.795623 TTGTACTGACTCGCTTATCCC 57.204 47.619 0.00 0.00 0.00 3.85
3000 3733 2.029623 TGTACTGACTCGCTTATCCCC 58.970 52.381 0.00 0.00 0.00 4.81
3001 3734 1.001597 GTACTGACTCGCTTATCCCCG 60.002 57.143 0.00 0.00 0.00 5.73
3002 3735 0.395311 ACTGACTCGCTTATCCCCGA 60.395 55.000 0.00 0.00 0.00 5.14
3007 3740 2.890612 TCGCTTATCCCCGAGAACA 58.109 52.632 0.00 0.00 0.00 3.18
3008 3741 0.458669 TCGCTTATCCCCGAGAACAC 59.541 55.000 0.00 0.00 0.00 3.32
3009 3742 0.529992 CGCTTATCCCCGAGAACACC 60.530 60.000 0.00 0.00 0.00 4.16
3010 3743 0.831307 GCTTATCCCCGAGAACACCT 59.169 55.000 0.00 0.00 0.00 4.00
3011 3744 2.037144 GCTTATCCCCGAGAACACCTA 58.963 52.381 0.00 0.00 0.00 3.08
3012 3745 2.433239 GCTTATCCCCGAGAACACCTAA 59.567 50.000 0.00 0.00 0.00 2.69
3013 3746 3.492829 GCTTATCCCCGAGAACACCTAAG 60.493 52.174 0.00 0.00 0.00 2.18
3020 3753 2.352814 CCGAGAACACCTAAGACACAGG 60.353 54.545 0.00 0.00 39.25 4.00
3119 3853 7.012704 GCATTGCCTCTGATCTGTTATAGAAAA 59.987 37.037 0.00 0.00 39.30 2.29
3160 3895 9.449719 TTGGGTTGTCTATTTAGAGAAATCTTC 57.550 33.333 0.00 0.00 37.34 2.87
3174 3909 7.960262 AGAGAAATCTTCCTTTGCAATTCTTT 58.040 30.769 0.00 0.00 0.00 2.52
3296 4038 0.690762 TGGAGGTAAGTGGAACCAGC 59.309 55.000 0.00 0.00 39.64 4.85
3432 4175 3.057526 GTGCTGGGTAAGTTGACCATTTC 60.058 47.826 1.39 0.00 41.73 2.17
3462 4205 1.487976 TGCATTGCACCCTTTTGGAAA 59.512 42.857 7.38 0.00 35.93 3.13
3539 4436 8.566260 ACATGTAGGTCGTACTTATTACTCATC 58.434 37.037 0.00 0.00 32.19 2.92
3695 4600 4.787551 TGTGTTGTCTGGTAAGAATGGTT 58.212 39.130 0.00 0.00 33.05 3.67
3701 4625 7.012894 TGTTGTCTGGTAAGAATGGTTTACTTG 59.987 37.037 0.00 0.00 33.05 3.16
3729 4657 8.893219 ATATCGTCATTCATGTTGATAACTGT 57.107 30.769 4.78 0.00 32.87 3.55
3766 4694 6.913170 ACATGATGTCAGGTGTTGTATTTTC 58.087 36.000 0.00 0.00 39.61 2.29
3771 4699 6.371809 TGTCAGGTGTTGTATTTTCTGAAC 57.628 37.500 0.00 0.00 33.78 3.18
3844 4772 2.240921 TGCTACCTTGGCATGTATCCAA 59.759 45.455 3.62 3.62 40.98 3.53
3924 4853 4.762251 ACAAAGTCTTGCTCTGGATAAACC 59.238 41.667 0.00 0.00 35.84 3.27
3930 4859 3.459232 TGCTCTGGATAAACCGATCAG 57.541 47.619 0.00 0.00 42.61 2.90
3931 4860 2.766263 TGCTCTGGATAAACCGATCAGT 59.234 45.455 0.00 0.00 42.61 3.41
3932 4861 3.958147 TGCTCTGGATAAACCGATCAGTA 59.042 43.478 0.00 0.00 42.61 2.74
3936 4865 6.975772 GCTCTGGATAAACCGATCAGTATATC 59.024 42.308 0.00 0.00 42.61 1.63
3941 4870 6.531948 GGATAAACCGATCAGTATATCTGTGC 59.468 42.308 0.00 0.00 43.97 4.57
3963 4892 2.443887 AATGCAACTTGTGACATGCC 57.556 45.000 7.13 0.00 38.00 4.40
3982 4911 5.702065 TGCCTATAGGTTTGTTGTGGATA 57.298 39.130 20.10 0.00 37.57 2.59
4098 5083 8.850156 ACACTAAAGAACATGCTAAACTGAATT 58.150 29.630 0.00 0.00 0.00 2.17
4127 5113 6.367374 TGTTTGTTCAGTACATCCCAGATA 57.633 37.500 0.00 0.00 36.44 1.98
4158 5144 6.280643 AGTGGTTTTATTTTCTTTCAGTGGC 58.719 36.000 0.00 0.00 0.00 5.01
4179 5167 4.497006 GGCAGCATGTTCTGTCAATATCAC 60.497 45.833 0.00 0.00 38.50 3.06
4217 5205 9.353999 GTTTCCTTGTGTAATTATGTTCCAATC 57.646 33.333 0.00 0.00 0.00 2.67
4301 5289 6.128254 GGCTAGTGTATTTGAGAAGAACAACC 60.128 42.308 0.00 0.00 0.00 3.77
4415 5403 6.710744 CACAGGAAGTACAAAGGTATTGAACT 59.289 38.462 0.00 0.00 0.00 3.01
4435 5423 3.207778 CTTCTGTAGACCTCTACCCTCG 58.792 54.545 9.51 0.00 46.22 4.63
4446 5434 4.080129 ACCTCTACCCTCGTGTTCTACATA 60.080 45.833 0.00 0.00 0.00 2.29
4515 5510 7.494211 TGCCCTGATCTAAATTCATTTTGATG 58.506 34.615 12.18 2.21 40.51 3.07
4522 5517 9.962759 GATCTAAATTCATTTTGATGTTGCAAC 57.037 29.630 22.83 22.83 40.51 4.17
4632 5628 7.919313 TTATGTACTACATTTACGTAGCTGC 57.081 36.000 7.01 0.00 42.23 5.25
4634 5630 5.449588 ATGTACTACATTTACGTAGCTGCGT 60.450 40.000 31.72 31.72 42.23 5.24
4635 5631 3.176708 ACTACATTTACGTAGCTGCGTG 58.823 45.455 35.38 22.60 45.33 5.34
4642 5638 0.381089 ACGTAGCTGCGTGGATCTAC 59.619 55.000 29.17 0.00 43.99 2.59
4643 5639 0.657659 CGTAGCTGCGTGGATCTACG 60.658 60.000 25.40 25.40 45.11 3.51
4644 5640 0.317938 GTAGCTGCGTGGATCTACGG 60.318 60.000 29.35 16.72 43.87 4.02
4651 5647 3.450578 TGCGTGGATCTACGGTAAAATC 58.549 45.455 29.35 13.59 43.87 2.17
4717 5713 1.090052 AGGTTAGCGCGAGATTTGGC 61.090 55.000 12.10 0.00 0.00 4.52
4869 5865 7.011950 TCGTAGGCTGGTATGATAAAAACAATG 59.988 37.037 0.00 0.00 0.00 2.82
4910 5906 7.280205 CCATGGTAGTTATTTGAGTGGTCTAAC 59.720 40.741 2.57 0.00 0.00 2.34
4926 5922 9.686683 AGTGGTCTAACTGCATTTTCTTAATAT 57.313 29.630 0.00 0.00 0.00 1.28
5080 6076 0.717784 CACTGCACACTACTGCATCG 59.282 55.000 0.00 0.00 46.05 3.84
5125 6121 5.310409 TCCAAAATATCAGATCCCAGGTC 57.690 43.478 0.00 0.00 0.00 3.85
5204 6294 9.995003 AATCTCTCAGTAGCAAAATCTATTAGG 57.005 33.333 0.00 0.00 0.00 2.69
5286 6381 3.788708 AGGGAGGAAAAATCCTTCTAGGG 59.211 47.826 3.27 0.00 40.86 3.53
5340 6435 5.814705 TGTTCAACCAACAATTGTGGAAATC 59.185 36.000 24.75 14.62 42.35 2.17
5445 6540 4.566545 TTTGTGTGTTATTCACCTGCTG 57.433 40.909 0.00 0.00 45.61 4.41
5460 6555 5.012975 TCACCTGCTGTATATGGCATTGATA 59.987 40.000 4.78 0.00 37.83 2.15
5479 6592 9.698617 CATTGATATCATTGTCATAAGCATACG 57.301 33.333 16.20 0.00 0.00 3.06
5508 6621 6.252599 TGGTTATCAATTATCCTGCAGACT 57.747 37.500 17.39 4.07 0.00 3.24
5609 6722 4.627284 TTTTCAAGTGGATCGGGTAAGA 57.373 40.909 0.00 0.00 0.00 2.10
5613 6726 4.766375 TCAAGTGGATCGGGTAAGATTTC 58.234 43.478 0.00 0.00 0.00 2.17
5717 6847 3.338249 TGCACTCTGATCTTACCTTTGC 58.662 45.455 0.00 0.00 0.00 3.68
5732 6862 2.156917 CTTTGCTGCACTGAAGGATGA 58.843 47.619 0.00 0.00 0.00 2.92
5736 6866 1.669779 GCTGCACTGAAGGATGATGAC 59.330 52.381 0.00 0.00 0.00 3.06
5738 6868 3.196463 CTGCACTGAAGGATGATGACTC 58.804 50.000 0.00 0.00 0.00 3.36
5904 7037 7.876936 AGCTGATTATTCATGTTCATTGACT 57.123 32.000 0.00 0.00 0.00 3.41
5960 7093 5.316167 TCAATTGGTATGACTGCACTCTTT 58.684 37.500 5.42 0.00 0.00 2.52
5994 7127 6.485984 AGCTGATCATTCATGTTCATAACTCC 59.514 38.462 0.00 0.00 36.32 3.85
5995 7128 6.485984 GCTGATCATTCATGTTCATAACTCCT 59.514 38.462 0.00 0.00 36.32 3.69
5996 7129 7.520131 GCTGATCATTCATGTTCATAACTCCTG 60.520 40.741 0.00 0.00 36.32 3.86
5999 7132 6.475504 TCATTCATGTTCATAACTCCTGTGT 58.524 36.000 0.00 0.00 0.00 3.72
6001 7134 8.267183 TCATTCATGTTCATAACTCCTGTGTAT 58.733 33.333 0.00 0.00 0.00 2.29
6002 7135 9.546428 CATTCATGTTCATAACTCCTGTGTATA 57.454 33.333 0.00 0.00 0.00 1.47
6005 7138 9.764363 TCATGTTCATAACTCCTGTGTATATTC 57.236 33.333 0.00 0.00 0.00 1.75
6006 7139 8.993121 CATGTTCATAACTCCTGTGTATATTCC 58.007 37.037 0.00 0.00 0.00 3.01
6011 7144 9.035890 TCATAACTCCTGTGTATATTCCCTATG 57.964 37.037 0.00 0.00 0.00 2.23
6089 7233 9.313118 CTTACATCTGTTTGCATGTATACACTA 57.687 33.333 7.96 0.00 35.80 2.74
6091 7235 7.331026 ACATCTGTTTGCATGTATACACTAGT 58.669 34.615 7.96 0.00 31.20 2.57
6092 7236 8.474831 ACATCTGTTTGCATGTATACACTAGTA 58.525 33.333 7.96 0.00 31.20 1.82
6093 7237 9.313118 CATCTGTTTGCATGTATACACTAGTAA 57.687 33.333 7.96 4.64 33.13 2.24
6094 7238 8.697846 TCTGTTTGCATGTATACACTAGTAAC 57.302 34.615 7.96 9.60 33.13 2.50
6095 7239 7.486870 TCTGTTTGCATGTATACACTAGTAACG 59.513 37.037 7.96 6.50 33.13 3.18
6096 7240 6.532302 TGTTTGCATGTATACACTAGTAACGG 59.468 38.462 7.96 0.00 33.13 4.44
6186 7379 3.514645 CACTAATGGTGCTGAAATTGGC 58.485 45.455 0.00 0.00 39.22 4.52
6231 7424 2.741092 GGTGGTGGACGAGAAGCA 59.259 61.111 0.00 0.00 0.00 3.91
6301 7494 7.357471 AGTAGGCATATCTTTTCTGGGAATTT 58.643 34.615 0.00 0.00 0.00 1.82
6303 7496 5.300286 AGGCATATCTTTTCTGGGAATTTCG 59.700 40.000 0.00 0.00 0.00 3.46
6306 7499 7.428826 GCATATCTTTTCTGGGAATTTCGAAT 58.571 34.615 0.00 0.00 0.00 3.34
6307 7500 7.380602 GCATATCTTTTCTGGGAATTTCGAATG 59.619 37.037 0.00 0.00 0.00 2.67
6355 7548 6.319048 ACAGAGATGGATTTGATACAACCT 57.681 37.500 0.00 0.00 0.00 3.50
6376 7569 8.793592 CAACCTATACTTACTTTTGCTTTCCTT 58.206 33.333 0.00 0.00 0.00 3.36
6408 7601 9.515226 TGTAATTTGAAGCTTACTAACTTGGAT 57.485 29.630 0.00 0.00 0.00 3.41
6468 7664 0.899019 TGCACATGCTCATTGCCATT 59.101 45.000 5.31 0.00 42.66 3.16
6503 7703 7.880195 AGTTCTAGACTAACAAAGTTGCATGAT 59.120 33.333 0.00 0.00 39.07 2.45
6504 7704 8.507249 GTTCTAGACTAACAAAGTTGCATGATT 58.493 33.333 0.00 0.00 39.07 2.57
6505 7705 8.032952 TCTAGACTAACAAAGTTGCATGATTG 57.967 34.615 0.00 0.00 39.07 2.67
6506 7706 6.882610 AGACTAACAAAGTTGCATGATTGA 57.117 33.333 11.43 0.00 39.07 2.57
6698 7952 1.680735 CCAGCTCTAGTGACTGCTAGG 59.319 57.143 0.00 0.00 39.05 3.02
6707 7961 4.252570 AGTGACTGCTAGGTACCACTAT 57.747 45.455 15.94 0.00 33.65 2.12
6737 7991 7.307989 CCTCGTGTTACTTTGATTCTGAAATGT 60.308 37.037 0.00 0.00 0.00 2.71
6783 8037 7.187244 TGGTTTGACAATGTAAATGCATTTG 57.813 32.000 30.43 18.54 37.00 2.32
6802 8056 9.979578 TGCATTTGTTATTTGTATTTGAGAACT 57.020 25.926 0.00 0.00 0.00 3.01
6887 8141 3.861840 TGTCCAGTATGCTAAAGCTCAC 58.138 45.455 3.26 1.43 42.66 3.51
6889 8143 1.594862 CCAGTATGCTAAAGCTCACGC 59.405 52.381 3.26 0.00 42.66 5.34
6992 8246 4.698575 CTCTAGCACAGGGGATAAACTTC 58.301 47.826 0.00 0.00 0.00 3.01
7093 8347 1.202615 GCAGAGTGCAGCCATCATCTA 60.203 52.381 0.00 0.00 44.26 1.98
7287 8545 2.993899 AGTGAGAGTAACATTTTCCGCG 59.006 45.455 0.00 0.00 0.00 6.46
7326 8584 4.330347 GGACTGCTCGAAATAAAAGGAGAC 59.670 45.833 0.00 0.00 33.25 3.36
7376 8634 6.406370 ACGTTAAGATCTTGATGAATGTCCA 58.594 36.000 22.41 0.00 0.00 4.02
7377 8635 6.313905 ACGTTAAGATCTTGATGAATGTCCAC 59.686 38.462 22.41 0.00 0.00 4.02
7381 8639 4.946157 AGATCTTGATGAATGTCCACCAAC 59.054 41.667 0.00 0.00 0.00 3.77
7382 8640 3.420893 TCTTGATGAATGTCCACCAACC 58.579 45.455 0.00 0.00 0.00 3.77
7383 8641 3.074390 TCTTGATGAATGTCCACCAACCT 59.926 43.478 0.00 0.00 0.00 3.50
7384 8642 4.288366 TCTTGATGAATGTCCACCAACCTA 59.712 41.667 0.00 0.00 0.00 3.08
7385 8643 3.950397 TGATGAATGTCCACCAACCTAC 58.050 45.455 0.00 0.00 0.00 3.18
7386 8644 2.871096 TGAATGTCCACCAACCTACC 57.129 50.000 0.00 0.00 0.00 3.18
7387 8645 2.344592 TGAATGTCCACCAACCTACCT 58.655 47.619 0.00 0.00 0.00 3.08
7388 8646 2.714250 TGAATGTCCACCAACCTACCTT 59.286 45.455 0.00 0.00 0.00 3.50
7392 8650 2.370849 TGTCCACCAACCTACCTTTCTC 59.629 50.000 0.00 0.00 0.00 2.87
7402 8660 6.239915 CCAACCTACCTTTCTCTACCTTTCTT 60.240 42.308 0.00 0.00 0.00 2.52
7410 8668 4.724279 TCTCTACCTTTCTTGGCCTTTT 57.276 40.909 3.32 0.00 0.00 2.27
7411 8669 4.398319 TCTCTACCTTTCTTGGCCTTTTG 58.602 43.478 3.32 0.00 0.00 2.44
7412 8670 4.104102 TCTCTACCTTTCTTGGCCTTTTGA 59.896 41.667 3.32 0.00 0.00 2.69
7413 8671 4.998051 TCTACCTTTCTTGGCCTTTTGAT 58.002 39.130 3.32 0.00 0.00 2.57
7414 8672 5.010282 TCTACCTTTCTTGGCCTTTTGATC 58.990 41.667 3.32 0.00 0.00 2.92
7441 8699 2.750948 GATAACTGTCACACGTGTGGT 58.249 47.619 39.88 29.44 45.65 4.16
7443 8701 0.248012 AACTGTCACACGTGTGGTCA 59.752 50.000 39.88 34.10 45.65 4.02
7453 8712 1.422402 ACGTGTGGTCATTAAGGGGTT 59.578 47.619 0.00 0.00 0.00 4.11
7457 8716 2.158385 TGTGGTCATTAAGGGGTTTGCT 60.158 45.455 0.00 0.00 0.00 3.91
7467 8726 0.030235 GGGGTTTGCTCACACGTTTC 59.970 55.000 0.00 0.00 0.00 2.78
7524 8783 2.353579 GTGTGGACAAAACAACTAGCGT 59.646 45.455 0.00 0.00 0.00 5.07
7598 8862 1.217244 GGATAACGCCCACACGACT 59.783 57.895 0.00 0.00 36.70 4.18
7604 8868 1.006102 CGCCCACACGACTTCTCTT 60.006 57.895 0.00 0.00 34.06 2.85
7624 8888 1.134228 AACCACCTACCTCACGGTTT 58.866 50.000 0.00 0.00 42.13 3.27
7679 8943 2.224159 AGTTGCCATGGTCCGGACT 61.224 57.895 32.52 12.83 0.00 3.85
7794 9058 0.031857 TGCCATTTTGGACAACTGCG 59.968 50.000 0.00 0.00 40.96 5.18
7909 9173 4.528920 TGGTTTGGTTTACTACAGTTGCT 58.471 39.130 0.00 0.00 0.00 3.91
7989 9254 4.523943 TGCTACAAAGAGACATGGCAAAAT 59.476 37.500 0.00 0.00 0.00 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 0.580104 AGGCAAGTTCGAAAACGACG 59.420 50.000 0.00 0.00 40.48 5.12
43 44 5.774179 ACCAATAGGAGTAGTACTAGGCAA 58.226 41.667 1.87 0.00 38.69 4.52
66 67 2.349672 CCCATGCCATGCCACGAAA 61.350 57.895 0.00 0.00 0.00 3.46
78 79 1.156645 GCGATGTCTCTGTCCCATGC 61.157 60.000 0.00 0.00 0.00 4.06
79 80 0.463204 AGCGATGTCTCTGTCCCATG 59.537 55.000 0.00 0.00 0.00 3.66
81 82 1.323271 GGAGCGATGTCTCTGTCCCA 61.323 60.000 0.00 0.00 33.70 4.37
82 83 1.323271 TGGAGCGATGTCTCTGTCCC 61.323 60.000 0.00 0.00 33.70 4.46
85 86 1.478631 TCATGGAGCGATGTCTCTGT 58.521 50.000 0.00 0.00 33.70 3.41
86 87 2.816204 ATCATGGAGCGATGTCTCTG 57.184 50.000 0.00 0.00 33.70 3.35
87 88 3.446873 GGATATCATGGAGCGATGTCTCT 59.553 47.826 4.83 0.00 33.07 3.10
88 89 3.446873 AGGATATCATGGAGCGATGTCTC 59.553 47.826 4.83 0.00 33.07 3.36
89 90 3.439154 AGGATATCATGGAGCGATGTCT 58.561 45.455 4.83 0.00 33.07 3.41
90 91 3.883830 AGGATATCATGGAGCGATGTC 57.116 47.619 4.83 0.00 32.07 3.06
91 92 3.129462 CGTAGGATATCATGGAGCGATGT 59.871 47.826 4.83 0.00 0.00 3.06
92 93 3.700154 CGTAGGATATCATGGAGCGATG 58.300 50.000 4.83 0.00 0.00 3.84
147 148 0.541863 GCCCAAGATTTCTCGAGGGA 59.458 55.000 13.56 1.50 40.70 4.20
148 149 0.253044 TGCCCAAGATTTCTCGAGGG 59.747 55.000 13.56 5.07 41.00 4.30
149 150 2.113860 TTGCCCAAGATTTCTCGAGG 57.886 50.000 13.56 0.00 0.00 4.63
150 151 3.691118 TGATTTGCCCAAGATTTCTCGAG 59.309 43.478 5.93 5.93 0.00 4.04
151 152 3.440173 GTGATTTGCCCAAGATTTCTCGA 59.560 43.478 0.00 0.00 0.00 4.04
153 154 5.397142 AAGTGATTTGCCCAAGATTTCTC 57.603 39.130 0.00 0.00 0.00 2.87
154 155 5.279657 GGAAAGTGATTTGCCCAAGATTTCT 60.280 40.000 0.00 0.00 0.00 2.52
155 156 4.931601 GGAAAGTGATTTGCCCAAGATTTC 59.068 41.667 0.00 0.00 0.00 2.17
159 163 1.885887 CGGAAAGTGATTTGCCCAAGA 59.114 47.619 0.00 0.00 0.00 3.02
195 199 5.734720 TCATCTTCCATACCAACTTCTGTC 58.265 41.667 0.00 0.00 0.00 3.51
206 210 5.506982 GCAAAGAATGGCTCATCTTCCATAC 60.507 44.000 0.00 0.00 41.92 2.39
207 211 4.581824 GCAAAGAATGGCTCATCTTCCATA 59.418 41.667 0.00 0.00 41.92 2.74
242 247 3.181469 TGGTCTACAAGATAACCATCGCC 60.181 47.826 0.00 0.00 36.88 5.54
246 251 4.225042 TGTGCTGGTCTACAAGATAACCAT 59.775 41.667 0.00 0.00 40.81 3.55
307 312 8.825745 GCAATCCAAACTTGAGAAAACAATTAA 58.174 29.630 0.00 0.00 0.00 1.40
308 313 8.203485 AGCAATCCAAACTTGAGAAAACAATTA 58.797 29.630 0.00 0.00 0.00 1.40
309 314 7.049754 AGCAATCCAAACTTGAGAAAACAATT 58.950 30.769 0.00 0.00 0.00 2.32
310 315 6.585416 AGCAATCCAAACTTGAGAAAACAAT 58.415 32.000 0.00 0.00 0.00 2.71
311 316 5.976458 AGCAATCCAAACTTGAGAAAACAA 58.024 33.333 0.00 0.00 0.00 2.83
313 318 6.420903 GGTAAGCAATCCAAACTTGAGAAAAC 59.579 38.462 0.00 0.00 0.00 2.43
315 320 5.596361 TGGTAAGCAATCCAAACTTGAGAAA 59.404 36.000 0.00 0.00 0.00 2.52
317 322 4.518970 GTGGTAAGCAATCCAAACTTGAGA 59.481 41.667 0.00 0.00 35.38 3.27
318 323 4.613622 CGTGGTAAGCAATCCAAACTTGAG 60.614 45.833 0.00 0.00 35.38 3.02
320 325 3.252215 TCGTGGTAAGCAATCCAAACTTG 59.748 43.478 0.00 0.00 35.38 3.16
321 326 3.482436 TCGTGGTAAGCAATCCAAACTT 58.518 40.909 0.00 0.00 35.38 2.66
322 327 3.134574 TCGTGGTAAGCAATCCAAACT 57.865 42.857 0.00 0.00 35.38 2.66
323 328 3.907894 TTCGTGGTAAGCAATCCAAAC 57.092 42.857 0.00 0.00 35.38 2.93
324 329 4.396790 GGTATTCGTGGTAAGCAATCCAAA 59.603 41.667 0.00 0.00 35.38 3.28
326 331 3.055021 TGGTATTCGTGGTAAGCAATCCA 60.055 43.478 0.00 0.00 0.00 3.41
327 332 3.311596 GTGGTATTCGTGGTAAGCAATCC 59.688 47.826 0.00 0.00 0.00 3.01
328 333 3.936453 TGTGGTATTCGTGGTAAGCAATC 59.064 43.478 0.00 0.00 0.00 2.67
330 335 3.404224 TGTGGTATTCGTGGTAAGCAA 57.596 42.857 0.00 0.00 0.00 3.91
332 337 2.612212 CCATGTGGTATTCGTGGTAAGC 59.388 50.000 0.00 0.00 37.25 3.09
394 399 9.102757 CCTTTTGTAGCATAATATATCTCGCAT 57.897 33.333 0.00 0.00 0.00 4.73
395 400 8.094548 ACCTTTTGTAGCATAATATATCTCGCA 58.905 33.333 0.00 0.00 0.00 5.10
396 401 8.480643 ACCTTTTGTAGCATAATATATCTCGC 57.519 34.615 0.00 0.00 0.00 5.03
408 413 9.592196 AATCCAATGATATACCTTTTGTAGCAT 57.408 29.630 0.00 0.00 31.61 3.79
409 414 8.995027 AATCCAATGATATACCTTTTGTAGCA 57.005 30.769 0.00 0.00 31.61 3.49
410 415 9.683069 CAAATCCAATGATATACCTTTTGTAGC 57.317 33.333 0.00 0.00 31.61 3.58
424 429 9.028284 ACATCTTTCAAGTACAAATCCAATGAT 57.972 29.630 0.00 0.00 0.00 2.45
426 431 9.480053 AAACATCTTTCAAGTACAAATCCAATG 57.520 29.630 0.00 0.00 0.00 2.82
427 432 9.696917 GAAACATCTTTCAAGTACAAATCCAAT 57.303 29.630 0.00 0.00 36.52 3.16
429 434 8.134895 GTGAAACATCTTTCAAGTACAAATCCA 58.865 33.333 0.00 0.00 45.89 3.41
430 435 8.134895 TGTGAAACATCTTTCAAGTACAAATCC 58.865 33.333 0.00 0.00 45.67 3.01
504 509 3.160545 CGCGCGAGTGATTTATGTTTTT 58.839 40.909 28.94 0.00 46.66 1.94
505 510 2.769376 CGCGCGAGTGATTTATGTTTT 58.231 42.857 28.94 0.00 46.66 2.43
506 511 2.435685 CGCGCGAGTGATTTATGTTT 57.564 45.000 28.94 0.00 46.66 2.83
523 528 3.878519 CTCGACGACCCCTCTCGC 61.879 72.222 0.00 0.00 37.15 5.03
524 529 3.878519 GCTCGACGACCCCTCTCG 61.879 72.222 0.00 0.00 39.68 4.04
552 557 7.953493 AGTTGAGGAAAATTATGGGGTAGAAAA 59.047 33.333 0.00 0.00 0.00 2.29
585 591 1.871039 GAAGCCTTGCGCCGATAATTA 59.129 47.619 4.18 0.00 38.78 1.40
586 592 0.663153 GAAGCCTTGCGCCGATAATT 59.337 50.000 4.18 0.00 38.78 1.40
605 612 4.082245 ACCTTGTAAGAAATGAATTGGGCG 60.082 41.667 0.00 0.00 0.00 6.13
732 770 3.625764 TCAGTGAAGACGAAAAGGTTTGG 59.374 43.478 0.00 0.00 0.00 3.28
733 771 4.875544 TCAGTGAAGACGAAAAGGTTTG 57.124 40.909 0.00 0.00 0.00 2.93
880 924 4.514577 AACGGCGGCGATGAGGAG 62.515 66.667 38.93 6.53 0.00 3.69
914 966 3.157949 GCGGAAGGGGAGGAGGAG 61.158 72.222 0.00 0.00 0.00 3.69
915 967 2.840203 ATTGCGGAAGGGGAGGAGGA 62.840 60.000 0.00 0.00 0.00 3.71
916 968 2.330924 GATTGCGGAAGGGGAGGAGG 62.331 65.000 0.00 0.00 0.00 4.30
1206 1259 4.021544 ACACAAACACACACACAAAATCCT 60.022 37.500 0.00 0.00 0.00 3.24
1210 1263 5.109210 TGAAACACAAACACACACACAAAA 58.891 33.333 0.00 0.00 0.00 2.44
1211 1264 4.682787 TGAAACACAAACACACACACAAA 58.317 34.783 0.00 0.00 0.00 2.83
1214 1267 3.241701 CCTGAAACACAAACACACACAC 58.758 45.455 0.00 0.00 0.00 3.82
1335 1388 2.534903 GGCTAGCGGGCATTTCGAC 61.535 63.158 9.00 0.00 40.53 4.20
1428 1481 1.808133 GCAAGGGACTAGAATCGCCAG 60.808 57.143 0.00 0.00 38.49 4.85
1456 1509 3.471680 ACTGCAGACTTCCTGAAAACTC 58.528 45.455 23.35 0.00 45.78 3.01
1492 1552 2.092375 AGCCCATAAAGCCTCTACCAAC 60.092 50.000 0.00 0.00 0.00 3.77
1501 1561 3.701040 TCAAAATGAGAGCCCATAAAGCC 59.299 43.478 0.00 0.00 0.00 4.35
1525 1585 5.946942 ATGCTTCATTCTCCTGTTCTCTA 57.053 39.130 0.00 0.00 0.00 2.43
1526 1586 4.840716 ATGCTTCATTCTCCTGTTCTCT 57.159 40.909 0.00 0.00 0.00 3.10
1602 1662 6.735694 GCAGTGTGAAATCAAATGTGGTACTT 60.736 38.462 0.00 0.00 0.00 2.24
1608 1668 6.201234 TGAATTGCAGTGTGAAATCAAATGTG 59.799 34.615 0.00 0.00 0.00 3.21
1827 1896 1.002624 GGTGCCGGAATCTGGACAA 60.003 57.895 13.24 0.00 0.00 3.18
1849 1918 2.352960 CTGCCTAACAATTTCTCCTCGC 59.647 50.000 0.00 0.00 0.00 5.03
2017 2088 2.158608 CCACCCTGTTTCAAGACCTCTT 60.159 50.000 0.00 0.00 36.45 2.85
2022 2093 1.318576 CCACCACCCTGTTTCAAGAC 58.681 55.000 0.00 0.00 0.00 3.01
2055 2127 3.113043 GTGGGTGGTTCCTACTTCCTAT 58.887 50.000 0.00 0.00 43.20 2.57
2065 2137 4.717313 GGAGGCGTGGGTGGTTCC 62.717 72.222 0.00 0.00 0.00 3.62
2077 2149 0.972983 TAGCTCAGACAGTGGGAGGC 60.973 60.000 0.00 1.38 0.00 4.70
2111 2183 2.725221 ATGCTCCAATCTGAACCTCC 57.275 50.000 0.00 0.00 0.00 4.30
2150 2222 3.784701 TTCATCGTCTGAGGCTTCTAC 57.215 47.619 0.00 0.00 34.68 2.59
2164 2236 8.229811 TGTGTTCTGAAACAGATAAATTCATCG 58.770 33.333 2.30 0.00 45.78 3.84
2228 2300 8.757789 CCGTAATGATAATACAGTTTTAGCGAA 58.242 33.333 0.00 0.00 0.00 4.70
2241 2314 8.726068 CAATGCAATGGTACCGTAATGATAATA 58.274 33.333 7.15 0.00 0.00 0.98
2252 2325 2.830772 CAGACAATGCAATGGTACCG 57.169 50.000 7.57 0.00 23.42 4.02
2279 2353 4.513442 CTGTACTAATTGGCTAGGTTGCA 58.487 43.478 0.00 0.00 34.04 4.08
2301 2375 4.330250 ACTGCTTCATATCATGGGTATGC 58.670 43.478 11.78 4.52 34.21 3.14
2471 2545 2.030805 GTGCAGAGTGGGAAATCAACAC 60.031 50.000 0.00 0.00 35.43 3.32
2865 3598 1.883275 AGCTAGCGCATATCGAAGAGT 59.117 47.619 11.47 0.00 41.67 3.24
2866 3599 2.627863 AGCTAGCGCATATCGAAGAG 57.372 50.000 11.47 0.00 41.67 2.85
2868 3601 2.162608 ACCTAGCTAGCGCATATCGAAG 59.837 50.000 15.74 0.00 41.67 3.79
2869 3602 2.160205 ACCTAGCTAGCGCATATCGAA 58.840 47.619 15.74 0.00 41.67 3.71
2870 3603 1.822506 ACCTAGCTAGCGCATATCGA 58.177 50.000 15.74 0.00 41.67 3.59
2871 3604 3.759527 TTACCTAGCTAGCGCATATCG 57.240 47.619 15.74 1.63 39.10 2.92
2872 3605 4.500035 GGGATTACCTAGCTAGCGCATATC 60.500 50.000 15.74 11.69 35.69 1.63
2873 3606 3.385111 GGGATTACCTAGCTAGCGCATAT 59.615 47.826 15.74 3.83 35.69 1.78
2874 3607 2.758979 GGGATTACCTAGCTAGCGCATA 59.241 50.000 15.74 2.08 35.69 3.14
2875 3608 1.550976 GGGATTACCTAGCTAGCGCAT 59.449 52.381 15.74 5.91 35.69 4.73
2876 3609 0.966920 GGGATTACCTAGCTAGCGCA 59.033 55.000 15.74 0.00 35.69 6.09
2877 3610 3.816580 GGGATTACCTAGCTAGCGC 57.183 57.895 15.74 0.00 35.85 5.92
2893 3626 9.907229 GGATCCCATATTAGATTAAGTAAAGGG 57.093 37.037 0.00 0.00 0.00 3.95
2897 3630 9.629649 AGGTGGATCCCATATTAGATTAAGTAA 57.370 33.333 9.90 0.00 35.28 2.24
2899 3632 9.047947 GTAGGTGGATCCCATATTAGATTAAGT 57.952 37.037 9.90 0.00 35.28 2.24
2900 3633 9.273137 AGTAGGTGGATCCCATATTAGATTAAG 57.727 37.037 9.90 0.00 35.28 1.85
2901 3634 9.046846 CAGTAGGTGGATCCCATATTAGATTAA 57.953 37.037 9.90 0.00 35.28 1.40
2902 3635 8.406643 TCAGTAGGTGGATCCCATATTAGATTA 58.593 37.037 9.90 0.00 35.28 1.75
2903 3636 7.256399 TCAGTAGGTGGATCCCATATTAGATT 58.744 38.462 9.90 0.00 35.28 2.40
2904 3637 6.815880 TCAGTAGGTGGATCCCATATTAGAT 58.184 40.000 9.90 0.00 35.28 1.98
2905 3638 6.227624 TCAGTAGGTGGATCCCATATTAGA 57.772 41.667 9.90 0.00 35.28 2.10
2906 3639 8.646004 CATATCAGTAGGTGGATCCCATATTAG 58.354 40.741 9.90 0.00 35.28 1.73
2907 3640 8.351414 TCATATCAGTAGGTGGATCCCATATTA 58.649 37.037 9.90 0.00 35.28 0.98
2908 3641 7.199048 TCATATCAGTAGGTGGATCCCATATT 58.801 38.462 9.90 0.00 35.28 1.28
2909 3642 6.756270 TCATATCAGTAGGTGGATCCCATAT 58.244 40.000 9.90 0.00 35.28 1.78
2910 3643 6.165742 TCATATCAGTAGGTGGATCCCATA 57.834 41.667 9.90 0.00 35.28 2.74
2911 3644 5.028678 TCATATCAGTAGGTGGATCCCAT 57.971 43.478 9.90 0.62 35.28 4.00
2912 3645 4.485653 TCATATCAGTAGGTGGATCCCA 57.514 45.455 9.90 0.00 36.75 4.37
2913 3646 5.485353 TCAATCATATCAGTAGGTGGATCCC 59.515 44.000 9.90 0.00 36.75 3.85
2914 3647 6.611613 TCAATCATATCAGTAGGTGGATCC 57.388 41.667 4.20 4.20 0.00 3.36
2917 3650 9.325248 TCATAATCAATCATATCAGTAGGTGGA 57.675 33.333 0.00 0.00 0.00 4.02
2918 3651 9.376075 GTCATAATCAATCATATCAGTAGGTGG 57.624 37.037 0.00 0.00 0.00 4.61
2919 3652 9.933723 TGTCATAATCAATCATATCAGTAGGTG 57.066 33.333 0.00 0.00 0.00 4.00
2938 3671 9.337396 GTCCAGTCCATACAATAATTGTCATAA 57.663 33.333 0.00 0.00 44.12 1.90
2939 3672 7.655732 CGTCCAGTCCATACAATAATTGTCATA 59.344 37.037 0.00 0.00 44.12 2.15
2940 3673 6.483307 CGTCCAGTCCATACAATAATTGTCAT 59.517 38.462 0.00 0.00 44.12 3.06
2941 3674 5.815222 CGTCCAGTCCATACAATAATTGTCA 59.185 40.000 0.00 0.00 44.12 3.58
2942 3675 5.236478 CCGTCCAGTCCATACAATAATTGTC 59.764 44.000 0.00 0.00 44.12 3.18
2944 3677 5.123227 ACCGTCCAGTCCATACAATAATTG 58.877 41.667 0.00 0.00 0.00 2.32
2945 3678 5.367945 ACCGTCCAGTCCATACAATAATT 57.632 39.130 0.00 0.00 0.00 1.40
2946 3679 5.123227 CAACCGTCCAGTCCATACAATAAT 58.877 41.667 0.00 0.00 0.00 1.28
2947 3680 4.020039 ACAACCGTCCAGTCCATACAATAA 60.020 41.667 0.00 0.00 0.00 1.40
2948 3681 3.516300 ACAACCGTCCAGTCCATACAATA 59.484 43.478 0.00 0.00 0.00 1.90
2949 3682 2.304761 ACAACCGTCCAGTCCATACAAT 59.695 45.455 0.00 0.00 0.00 2.71
2950 3683 1.695242 ACAACCGTCCAGTCCATACAA 59.305 47.619 0.00 0.00 0.00 2.41
2951 3684 1.001520 CACAACCGTCCAGTCCATACA 59.998 52.381 0.00 0.00 0.00 2.29
2952 3685 1.722011 CACAACCGTCCAGTCCATAC 58.278 55.000 0.00 0.00 0.00 2.39
2953 3686 0.036765 GCACAACCGTCCAGTCCATA 60.037 55.000 0.00 0.00 0.00 2.74
2954 3687 1.302511 GCACAACCGTCCAGTCCAT 60.303 57.895 0.00 0.00 0.00 3.41
2955 3688 2.110213 GCACAACCGTCCAGTCCA 59.890 61.111 0.00 0.00 0.00 4.02
2956 3689 1.525077 TTGCACAACCGTCCAGTCC 60.525 57.895 0.00 0.00 0.00 3.85
2957 3690 1.647084 GTTGCACAACCGTCCAGTC 59.353 57.895 1.97 0.00 35.36 3.51
2958 3691 3.821995 GTTGCACAACCGTCCAGT 58.178 55.556 1.97 0.00 35.36 4.00
2966 3699 2.546368 TCAGTACAATCGGTTGCACAAC 59.454 45.455 14.06 4.92 38.96 3.32
2967 3700 2.546368 GTCAGTACAATCGGTTGCACAA 59.454 45.455 14.06 0.00 38.96 3.33
2968 3701 2.139917 GTCAGTACAATCGGTTGCACA 58.860 47.619 14.06 0.00 38.96 4.57
2969 3702 2.412089 GAGTCAGTACAATCGGTTGCAC 59.588 50.000 8.70 5.90 38.96 4.57
2970 3703 2.683968 GAGTCAGTACAATCGGTTGCA 58.316 47.619 8.70 0.00 38.96 4.08
2971 3704 1.654105 CGAGTCAGTACAATCGGTTGC 59.346 52.381 8.70 0.00 38.96 4.17
2972 3705 1.654105 GCGAGTCAGTACAATCGGTTG 59.346 52.381 6.92 6.92 41.20 3.77
2973 3706 1.544691 AGCGAGTCAGTACAATCGGTT 59.455 47.619 2.46 0.00 42.60 4.44
2974 3707 1.174783 AGCGAGTCAGTACAATCGGT 58.825 50.000 2.46 2.46 40.67 4.69
2975 3708 2.279582 AAGCGAGTCAGTACAATCGG 57.720 50.000 5.40 0.00 35.76 4.18
2976 3709 3.975670 GGATAAGCGAGTCAGTACAATCG 59.024 47.826 0.00 0.00 38.19 3.34
2977 3710 4.299978 GGGATAAGCGAGTCAGTACAATC 58.700 47.826 0.00 0.00 0.00 2.67
2978 3711 3.069729 GGGGATAAGCGAGTCAGTACAAT 59.930 47.826 0.00 0.00 0.00 2.71
2979 3712 2.429610 GGGGATAAGCGAGTCAGTACAA 59.570 50.000 0.00 0.00 0.00 2.41
2980 3713 2.029623 GGGGATAAGCGAGTCAGTACA 58.970 52.381 0.00 0.00 0.00 2.90
2981 3714 1.001597 CGGGGATAAGCGAGTCAGTAC 60.002 57.143 0.00 0.00 0.00 2.73
2982 3715 1.134007 TCGGGGATAAGCGAGTCAGTA 60.134 52.381 0.00 0.00 0.00 2.74
2983 3716 0.395311 TCGGGGATAAGCGAGTCAGT 60.395 55.000 0.00 0.00 0.00 3.41
2984 3717 0.312416 CTCGGGGATAAGCGAGTCAG 59.688 60.000 0.00 0.00 0.00 3.51
2985 3718 0.106868 TCTCGGGGATAAGCGAGTCA 60.107 55.000 0.00 0.00 0.00 3.41
2986 3719 1.030457 TTCTCGGGGATAAGCGAGTC 58.970 55.000 0.00 0.00 0.00 3.36
2987 3720 0.745468 GTTCTCGGGGATAAGCGAGT 59.255 55.000 0.00 0.00 0.00 4.18
2988 3721 0.744874 TGTTCTCGGGGATAAGCGAG 59.255 55.000 0.00 0.00 0.00 5.03
2989 3722 0.458669 GTGTTCTCGGGGATAAGCGA 59.541 55.000 0.00 0.00 0.00 4.93
2990 3723 0.529992 GGTGTTCTCGGGGATAAGCG 60.530 60.000 0.00 0.00 0.00 4.68
2991 3724 0.831307 AGGTGTTCTCGGGGATAAGC 59.169 55.000 0.00 0.00 0.00 3.09
2992 3725 3.958798 TCTTAGGTGTTCTCGGGGATAAG 59.041 47.826 0.00 0.00 0.00 1.73
2993 3726 3.703052 GTCTTAGGTGTTCTCGGGGATAA 59.297 47.826 0.00 0.00 0.00 1.75
2994 3727 3.294214 GTCTTAGGTGTTCTCGGGGATA 58.706 50.000 0.00 0.00 0.00 2.59
2995 3728 2.108970 GTCTTAGGTGTTCTCGGGGAT 58.891 52.381 0.00 0.00 0.00 3.85
2996 3729 1.203087 TGTCTTAGGTGTTCTCGGGGA 60.203 52.381 0.00 0.00 0.00 4.81
2997 3730 1.067071 GTGTCTTAGGTGTTCTCGGGG 60.067 57.143 0.00 0.00 0.00 5.73
2998 3731 1.616865 TGTGTCTTAGGTGTTCTCGGG 59.383 52.381 0.00 0.00 0.00 5.14
2999 3732 2.352814 CCTGTGTCTTAGGTGTTCTCGG 60.353 54.545 0.00 0.00 0.00 4.63
3000 3733 2.557056 TCCTGTGTCTTAGGTGTTCTCG 59.443 50.000 0.00 0.00 36.67 4.04
3001 3734 4.602340 TTCCTGTGTCTTAGGTGTTCTC 57.398 45.455 0.00 0.00 36.67 2.87
3002 3735 4.202367 CCTTTCCTGTGTCTTAGGTGTTCT 60.202 45.833 0.00 0.00 36.67 3.01
3003 3736 4.065789 CCTTTCCTGTGTCTTAGGTGTTC 58.934 47.826 0.00 0.00 36.67 3.18
3004 3737 3.714798 TCCTTTCCTGTGTCTTAGGTGTT 59.285 43.478 0.00 0.00 36.67 3.32
3005 3738 3.314693 TCCTTTCCTGTGTCTTAGGTGT 58.685 45.455 0.00 0.00 36.67 4.16
3006 3739 4.559862 ATCCTTTCCTGTGTCTTAGGTG 57.440 45.455 0.00 0.00 36.67 4.00
3007 3740 6.353082 CCATAATCCTTTCCTGTGTCTTAGGT 60.353 42.308 0.00 0.00 36.67 3.08
3008 3741 6.058183 CCATAATCCTTTCCTGTGTCTTAGG 58.942 44.000 0.00 0.00 36.63 2.69
3009 3742 6.653989 ACCATAATCCTTTCCTGTGTCTTAG 58.346 40.000 0.00 0.00 0.00 2.18
3010 3743 6.636454 ACCATAATCCTTTCCTGTGTCTTA 57.364 37.500 0.00 0.00 0.00 2.10
3011 3744 5.520748 ACCATAATCCTTTCCTGTGTCTT 57.479 39.130 0.00 0.00 0.00 3.01
3012 3745 6.636454 TTACCATAATCCTTTCCTGTGTCT 57.364 37.500 0.00 0.00 0.00 3.41
3013 3746 7.696992 TTTTACCATAATCCTTTCCTGTGTC 57.303 36.000 0.00 0.00 0.00 3.67
3047 3780 0.890996 CCTTGCCCAGTGGAGTGAAC 60.891 60.000 11.95 0.00 0.00 3.18
3057 3790 3.255888 GGTTTCTCTAAAACCTTGCCCAG 59.744 47.826 11.50 0.00 44.71 4.45
3119 3853 1.214424 ACCCAACCAGTACACAAGCTT 59.786 47.619 0.00 0.00 0.00 3.74
3160 3895 9.643693 ACAGTTTATATCAAAGAATTGCAAAGG 57.356 29.630 1.71 0.00 36.45 3.11
3174 3909 7.984391 CACTGGTGCATTTACAGTTTATATCA 58.016 34.615 11.86 0.00 42.38 2.15
3208 3943 7.529880 AGCAAACTTTCAATGTTCTTTTCAG 57.470 32.000 0.00 0.00 0.00 3.02
3296 4038 7.094762 CCAATGATGATACCTGAGAATGTGATG 60.095 40.741 0.00 0.00 0.00 3.07
3334 4077 6.436532 TCCAGACCTATTCGGATAAGGATTAC 59.563 42.308 11.84 2.93 36.31 1.89
3432 4175 3.067180 AGGGTGCAATGCAAGAATTATCG 59.933 43.478 10.44 0.00 41.47 2.92
3462 4205 8.540388 ACTACATGGATTAACATTGTAGTCACT 58.460 33.333 12.84 0.00 39.10 3.41
3539 4436 5.342806 TGAGAGCAACATAACGTTTGAAG 57.657 39.130 5.91 4.71 34.86 3.02
3594 4499 5.652452 AGACTTAACCATAATTTCCTGGCAC 59.348 40.000 0.00 0.00 35.88 5.01
3729 4657 6.150976 CCTGACATCATGTAAGCCAAGTAAAA 59.849 38.462 0.00 0.00 26.95 1.52
3812 4740 3.181450 GCCAAGGTAGCATGGACTTCTAT 60.181 47.826 19.83 0.00 39.12 1.98
3844 4772 4.943705 ACAACAATGAACGCAAGAGGATAT 59.056 37.500 0.00 0.00 43.62 1.63
3941 4870 2.477375 GCATGTCACAAGTTGCATTTGG 59.523 45.455 13.91 5.48 35.22 3.28
4080 5065 8.603181 ACAAACAAAATTCAGTTTAGCATGTTC 58.397 29.630 7.60 0.00 36.28 3.18
4098 5083 6.071334 TGGGATGTACTGAACAAACAAACAAA 60.071 34.615 0.00 0.00 42.70 2.83
4158 5144 5.583457 TCTGTGATATTGACAGAACATGCTG 59.417 40.000 13.47 0.00 45.38 4.41
4179 5167 3.809832 CACAAGGAAACTGTACCAGTCTG 59.190 47.826 0.00 0.00 44.62 3.51
4217 5205 1.281867 TGGAGCACCCTTCCTGTAATG 59.718 52.381 0.00 0.00 35.67 1.90
4446 5434 5.416952 CCAGCAGTGAAATCTAGGAAACAAT 59.583 40.000 0.00 0.00 0.00 2.71
4463 5451 3.869623 CTGCCTTCATACCAGCAGT 57.130 52.632 2.75 0.00 46.00 4.40
4505 5500 4.933505 TGAGGTTGCAACATCAAAATGA 57.066 36.364 36.70 18.03 45.42 2.57
4515 5510 4.154918 CAGGAAATCTACTGAGGTTGCAAC 59.845 45.833 21.59 21.59 36.86 4.17
4522 5517 3.529533 CAGTGCAGGAAATCTACTGAGG 58.470 50.000 0.00 0.00 40.80 3.86
4617 5613 1.067425 TCCACGCAGCTACGTAAATGT 60.067 47.619 12.49 0.00 46.34 2.71
4630 5626 3.131577 AGATTTTACCGTAGATCCACGCA 59.868 43.478 8.26 0.00 40.59 5.24
4632 5628 4.928601 TCAGATTTTACCGTAGATCCACG 58.071 43.478 6.71 6.71 41.59 4.94
4634 5630 6.703319 TGTTTCAGATTTTACCGTAGATCCA 58.297 36.000 0.00 0.00 0.00 3.41
4635 5631 7.605410 TTGTTTCAGATTTTACCGTAGATCC 57.395 36.000 0.00 0.00 0.00 3.36
4651 5647 7.762615 ACCTGCATTGAATAATCATTGTTTCAG 59.237 33.333 4.96 4.21 38.56 3.02
4717 5713 5.464168 CCACTAAGTTCAAGAAGGCATTTG 58.536 41.667 0.00 0.00 0.00 2.32
4946 5942 8.454106 GCTTTCATGAAGAAGCTGTATTAAGAA 58.546 33.333 20.21 0.00 37.57 2.52
5080 6076 6.293081 GGATGCCTTTCAAAAAGCTTTCTTTC 60.293 38.462 13.10 2.01 41.40 2.62
5286 6381 5.002516 CCTTCTGATTCAATAGCAGATCCC 58.997 45.833 0.00 0.00 38.35 3.85
5479 6592 4.520492 CAGGATAATTGATAACCAGGGCAC 59.480 45.833 0.00 0.00 0.00 5.01
5482 6595 4.728772 TGCAGGATAATTGATAACCAGGG 58.271 43.478 0.00 0.00 0.00 4.45
5508 6621 6.040729 TGTTGATTTCAATTGCTTCCTTCAGA 59.959 34.615 0.00 0.00 38.24 3.27
5609 6722 4.770795 CTCTCTGGGTTATGGAACGAAAT 58.229 43.478 0.00 0.00 36.32 2.17
5613 6726 1.482593 AGCTCTCTGGGTTATGGAACG 59.517 52.381 0.00 0.00 36.32 3.95
5681 6794 2.738846 GAGTGCAGTCATACCAACTGTG 59.261 50.000 16.85 0.00 44.79 3.66
5717 6847 3.118702 AGAGTCATCATCCTTCAGTGCAG 60.119 47.826 0.00 0.00 0.00 4.41
5732 6862 7.545965 CGTTAGACCATTAGAAAACAGAGTCAT 59.454 37.037 0.00 0.00 0.00 3.06
5736 6866 5.869888 AGCGTTAGACCATTAGAAAACAGAG 59.130 40.000 0.00 0.00 0.00 3.35
5738 6868 5.163854 CCAGCGTTAGACCATTAGAAAACAG 60.164 44.000 0.00 0.00 0.00 3.16
5878 7011 9.053840 AGTCAATGAACATGAATAATCAGCTAG 57.946 33.333 0.00 0.00 39.39 3.42
5904 7037 9.948964 TGAAATTGAATAGATGACTCTTGAAGA 57.051 29.630 0.00 0.00 32.66 2.87
5971 7104 7.498239 ACAGGAGTTATGAACATGAATGATCAG 59.502 37.037 0.00 0.00 41.79 2.90
5994 7127 5.858381 AGCACACATAGGGAATATACACAG 58.142 41.667 0.00 0.00 0.00 3.66
5995 7128 5.887214 AGCACACATAGGGAATATACACA 57.113 39.130 0.00 0.00 0.00 3.72
5996 7129 7.228314 TCTAGCACACATAGGGAATATACAC 57.772 40.000 0.00 0.00 0.00 2.90
5999 7132 9.769677 ATACTTCTAGCACACATAGGGAATATA 57.230 33.333 0.00 0.00 0.00 0.86
6001 7134 9.769677 ATATACTTCTAGCACACATAGGGAATA 57.230 33.333 0.00 0.00 0.00 1.75
6002 7135 8.671987 ATATACTTCTAGCACACATAGGGAAT 57.328 34.615 0.00 0.00 0.00 3.01
6003 7136 7.950684 AGATATACTTCTAGCACACATAGGGAA 59.049 37.037 0.00 0.00 0.00 3.97
6004 7137 7.471041 AGATATACTTCTAGCACACATAGGGA 58.529 38.462 0.00 0.00 0.00 4.20
6005 7138 7.710676 AGATATACTTCTAGCACACATAGGG 57.289 40.000 0.00 0.00 0.00 3.53
6006 7139 9.632807 GAAAGATATACTTCTAGCACACATAGG 57.367 37.037 0.00 0.00 37.93 2.57
6011 7144 9.512435 TTTACGAAAGATATACTTCTAGCACAC 57.488 33.333 0.00 0.00 37.93 3.82
6089 7233 6.356186 AGGAGAATAAGAACAACCGTTACT 57.644 37.500 0.00 0.00 34.75 2.24
6091 7235 5.410439 GCAAGGAGAATAAGAACAACCGTTA 59.590 40.000 0.00 0.00 34.75 3.18
6092 7236 4.215613 GCAAGGAGAATAAGAACAACCGTT 59.784 41.667 0.00 0.00 38.33 4.44
6093 7237 3.751698 GCAAGGAGAATAAGAACAACCGT 59.248 43.478 0.00 0.00 0.00 4.83
6094 7238 4.003648 AGCAAGGAGAATAAGAACAACCG 58.996 43.478 0.00 0.00 0.00 4.44
6095 7239 6.458888 GCATAGCAAGGAGAATAAGAACAACC 60.459 42.308 0.00 0.00 0.00 3.77
6096 7240 6.094048 TGCATAGCAAGGAGAATAAGAACAAC 59.906 38.462 0.00 0.00 34.76 3.32
6186 7379 1.604604 TTTCTCCACCAAAAGCTCCG 58.395 50.000 0.00 0.00 0.00 4.63
6301 7494 4.401202 TGATCTACAGCTTGTACCATTCGA 59.599 41.667 0.00 0.00 0.00 3.71
6303 7496 5.665459 AGTGATCTACAGCTTGTACCATTC 58.335 41.667 0.00 0.00 0.00 2.67
6306 7499 4.344978 AGAGTGATCTACAGCTTGTACCA 58.655 43.478 0.00 0.00 0.00 3.25
6307 7500 4.993029 AGAGTGATCTACAGCTTGTACC 57.007 45.455 0.00 0.00 0.00 3.34
6344 7537 9.953565 AGCAAAAGTAAGTATAGGTTGTATCAA 57.046 29.630 0.00 0.00 0.00 2.57
6385 7578 8.635765 TGATCCAAGTTAGTAAGCTTCAAATT 57.364 30.769 0.00 0.00 0.00 1.82
6398 7591 8.492673 TTTAGCATACAGTTGATCCAAGTTAG 57.507 34.615 0.00 0.00 0.00 2.34
6408 7601 7.973388 GGTTGCATTATTTTAGCATACAGTTGA 59.027 33.333 0.00 0.00 38.19 3.18
6468 7664 7.844493 TTGTTAGTCTAGAACTTGGGAACTA 57.156 36.000 0.00 0.00 39.55 2.24
6676 7929 2.516227 AGCAGTCACTAGAGCTGGTA 57.484 50.000 12.07 0.00 38.90 3.25
6698 7952 3.863142 ACACGAGGTTGATAGTGGTAC 57.137 47.619 0.00 0.00 38.78 3.34
6707 7961 5.465390 CAGAATCAAAGTAACACGAGGTTGA 59.535 40.000 7.34 0.00 40.73 3.18
6737 7991 5.241506 CCAATGAGAAGCTTGGTAAAAGTCA 59.758 40.000 2.10 0.00 37.67 3.41
6797 8051 4.142609 TGCTTGTTTCTGTCTCAGTTCT 57.857 40.909 0.00 0.00 32.61 3.01
6798 8052 4.882671 TTGCTTGTTTCTGTCTCAGTTC 57.117 40.909 0.00 0.00 32.61 3.01
6799 8053 5.402398 GTTTTGCTTGTTTCTGTCTCAGTT 58.598 37.500 0.00 0.00 32.61 3.16
6800 8054 4.142381 GGTTTTGCTTGTTTCTGTCTCAGT 60.142 41.667 0.00 0.00 32.61 3.41
6801 8055 4.354587 GGTTTTGCTTGTTTCTGTCTCAG 58.645 43.478 0.00 0.00 0.00 3.35
6802 8056 3.181501 CGGTTTTGCTTGTTTCTGTCTCA 60.182 43.478 0.00 0.00 0.00 3.27
6803 8057 3.064820 TCGGTTTTGCTTGTTTCTGTCTC 59.935 43.478 0.00 0.00 0.00 3.36
6804 8058 3.013921 TCGGTTTTGCTTGTTTCTGTCT 58.986 40.909 0.00 0.00 0.00 3.41
6845 8099 6.708949 GGACAGTTGAGGTCAAAGTATAACAA 59.291 38.462 0.00 0.00 37.63 2.83
6853 8107 3.199880 ACTGGACAGTTGAGGTCAAAG 57.800 47.619 0.00 0.00 38.83 2.77
6887 8141 2.256174 CAATTGCAGAACCTTGATGCG 58.744 47.619 0.00 0.00 42.92 4.73
6889 8143 5.754406 TGAAAACAATTGCAGAACCTTGATG 59.246 36.000 5.05 0.00 0.00 3.07
6940 8194 4.271049 CGCTTCCATAGTTGATTGTACTGG 59.729 45.833 0.00 0.00 0.00 4.00
6983 8237 4.436986 GCACCAAACTAGCCGAAGTTTATC 60.437 45.833 8.59 0.00 45.59 1.75
6992 8246 0.798776 CTTCAGCACCAAACTAGCCG 59.201 55.000 0.00 0.00 0.00 5.52
7093 8347 5.661056 TCGACACATAGAGAATTTCCTGT 57.339 39.130 0.00 0.00 0.00 4.00
7287 8545 1.751924 AGTCCGATCTCAAGGTAGCAC 59.248 52.381 0.00 0.00 0.00 4.40
7326 8584 0.736325 CAACGACCTGAAGGCTACGG 60.736 60.000 13.04 0.00 39.32 4.02
7376 8634 4.143406 AGGTAGAGAAAGGTAGGTTGGT 57.857 45.455 0.00 0.00 0.00 3.67
7377 8635 5.248705 AGAAAGGTAGAGAAAGGTAGGTTGG 59.751 44.000 0.00 0.00 0.00 3.77
7381 8639 5.735766 CCAAGAAAGGTAGAGAAAGGTAGG 58.264 45.833 0.00 0.00 0.00 3.18
7382 8640 5.179533 GCCAAGAAAGGTAGAGAAAGGTAG 58.820 45.833 0.00 0.00 0.00 3.18
7383 8641 4.019591 GGCCAAGAAAGGTAGAGAAAGGTA 60.020 45.833 0.00 0.00 0.00 3.08
7384 8642 3.244946 GGCCAAGAAAGGTAGAGAAAGGT 60.245 47.826 0.00 0.00 0.00 3.50
7385 8643 3.009584 AGGCCAAGAAAGGTAGAGAAAGG 59.990 47.826 5.01 0.00 0.00 3.11
7386 8644 4.293662 AGGCCAAGAAAGGTAGAGAAAG 57.706 45.455 5.01 0.00 0.00 2.62
7387 8645 4.724279 AAGGCCAAGAAAGGTAGAGAAA 57.276 40.909 5.01 0.00 0.00 2.52
7388 8646 4.724279 AAAGGCCAAGAAAGGTAGAGAA 57.276 40.909 5.01 0.00 0.00 2.87
7392 8650 4.142600 CGATCAAAAGGCCAAGAAAGGTAG 60.143 45.833 5.01 0.00 0.00 3.18
7402 8660 1.011968 CGTCGTCGATCAAAAGGCCA 61.012 55.000 5.01 0.00 39.71 5.36
7414 8672 1.903139 GTGTGACAGTTATCGTCGTCG 59.097 52.381 0.00 0.00 36.11 5.12
7441 8699 3.153919 GTGTGAGCAAACCCCTTAATGA 58.846 45.455 0.00 0.00 0.00 2.57
7443 8701 2.159382 CGTGTGAGCAAACCCCTTAAT 58.841 47.619 0.00 0.00 0.00 1.40
7467 8726 3.199677 TGTTCCTCTTAAACACCACACG 58.800 45.455 0.00 0.00 31.90 4.49
7509 8768 2.353579 GTGTGGACGCTAGTTGTTTTGT 59.646 45.455 0.00 0.00 0.00 2.83
7598 8862 3.508793 CGTGAGGTAGGTGGTTAAGAGAA 59.491 47.826 0.00 0.00 0.00 2.87
7679 8943 4.451096 GCAGTTAAACGGACATTGAAGAGA 59.549 41.667 0.00 0.00 0.00 3.10
7806 9070 7.071950 TGGCAACTATAGTAAACCAGACCATAT 59.928 37.037 5.65 0.00 37.61 1.78
7891 9155 8.511321 CAAATCATAGCAACTGTAGTAAACCAA 58.489 33.333 0.00 0.00 0.00 3.67
7909 9173 7.093945 GGCAACTCCTAAGGTTTTCAAATCATA 60.094 37.037 0.00 0.00 0.00 2.15
7966 9230 2.857186 TGCCATGTCTCTTTGTAGCA 57.143 45.000 0.00 0.00 0.00 3.49


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.