Multiple sequence alignment - TraesCS5D01G213300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G213300 chr5D 100.000 8645 0 0 1 8645 322382061 322390705 0.000000e+00 15965.0
1 TraesCS5D01G213300 chr5D 97.701 174 4 0 2865 3038 274578004 274578177 5.070000e-77 300.0
2 TraesCS5D01G213300 chr5D 89.764 127 11 2 6970 7095 412263320 412263445 2.500000e-35 161.0
3 TraesCS5D01G213300 chr5D 98.039 51 1 0 6418 6468 432461684 432461634 1.200000e-13 89.8
4 TraesCS5D01G213300 chr5D 98.077 52 0 1 6418 6469 509559201 509559251 1.200000e-13 89.8
5 TraesCS5D01G213300 chr5D 97.959 49 1 0 6420 6468 545227780 545227828 1.550000e-12 86.1
6 TraesCS5D01G213300 chr5D 94.000 50 1 2 655 704 448129485 448129438 3.350000e-09 75.0
7 TraesCS5D01G213300 chr5D 90.741 54 2 3 655 708 539225796 539225746 1.560000e-07 69.4
8 TraesCS5D01G213300 chr5D 97.368 38 1 0 599 636 448129620 448129583 2.010000e-06 65.8
9 TraesCS5D01G213300 chr5A 93.323 2591 95 24 3249 5815 417898998 417901534 0.000000e+00 3755.0
10 TraesCS5D01G213300 chr5A 93.040 2112 85 33 774 2874 417896761 417898821 0.000000e+00 3029.0
11 TraesCS5D01G213300 chr5A 91.816 1564 77 19 7116 8645 417902891 417904437 0.000000e+00 2132.0
12 TraesCS5D01G213300 chr5A 95.282 657 19 5 6467 7115 417902192 417902844 0.000000e+00 1031.0
13 TraesCS5D01G213300 chr5A 96.053 608 21 2 5852 6459 417901536 417902140 0.000000e+00 987.0
14 TraesCS5D01G213300 chr5A 94.096 542 20 5 1 531 417896133 417896673 0.000000e+00 813.0
15 TraesCS5D01G213300 chr5A 84.039 307 45 3 4532 4835 482551246 482550941 8.490000e-75 292.0
16 TraesCS5D01G213300 chr5A 97.110 173 3 2 2869 3041 115664677 115664847 3.050000e-74 291.0
17 TraesCS5D01G213300 chr5A 93.956 182 11 0 3035 3216 417898819 417899000 8.550000e-70 276.0
18 TraesCS5D01G213300 chr5A 94.167 120 6 1 6976 7095 367133167 367133285 1.920000e-41 182.0
19 TraesCS5D01G213300 chr5B 94.240 2170 77 26 726 2874 373683481 373685623 0.000000e+00 3271.0
20 TraesCS5D01G213300 chr5B 96.305 1678 28 9 3035 4702 373685621 373687274 0.000000e+00 2724.0
21 TraesCS5D01G213300 chr5B 95.623 1348 43 5 4698 6045 373687353 373688684 0.000000e+00 2148.0
22 TraesCS5D01G213300 chr5B 86.114 929 48 30 7774 8645 373690227 373691131 0.000000e+00 926.0
23 TraesCS5D01G213300 chr5B 92.210 629 35 8 7126 7741 373689603 373690230 0.000000e+00 878.0
24 TraesCS5D01G213300 chr5B 95.585 521 15 5 6465 6977 373689007 373689527 0.000000e+00 828.0
25 TraesCS5D01G213300 chr5B 91.429 595 31 10 1 587 373682899 373683481 0.000000e+00 798.0
26 TraesCS5D01G213300 chr5B 96.386 332 9 1 6098 6429 373688682 373689010 2.120000e-150 544.0
27 TraesCS5D01G213300 chr5B 93.299 194 8 4 2859 3051 577516227 577516038 1.840000e-71 281.0
28 TraesCS5D01G213300 chr5B 93.878 49 1 2 656 704 547827483 547827437 1.200000e-08 73.1
29 TraesCS5D01G213300 chr5B 91.837 49 2 2 656 704 547672514 547672468 5.600000e-07 67.6
30 TraesCS5D01G213300 chr5B 100.000 34 0 0 599 632 345346346 345346313 7.250000e-06 63.9
31 TraesCS5D01G213300 chr5B 97.222 36 1 0 601 636 590538111 590538076 2.610000e-05 62.1
32 TraesCS5D01G213300 chr5B 94.595 37 2 0 600 636 710347878 710347842 3.370000e-04 58.4
33 TraesCS5D01G213300 chr4D 97.674 172 4 0 2871 3042 93338208 93338037 6.560000e-76 296.0
34 TraesCS5D01G213300 chr4D 81.743 241 35 9 4532 4770 7791993 7791760 8.860000e-45 193.0
35 TraesCS5D01G213300 chr2D 98.214 168 3 0 2870 3037 24312190 24312357 2.360000e-75 294.0
36 TraesCS5D01G213300 chr2D 92.647 204 12 3 2837 3040 426427768 426427968 3.050000e-74 291.0
37 TraesCS5D01G213300 chr4B 96.067 178 7 0 2863 3040 389466769 389466946 3.050000e-74 291.0
38 TraesCS5D01G213300 chr3A 96.089 179 5 1 2869 3047 641872951 641872775 3.050000e-74 291.0
39 TraesCS5D01G213300 chr3A 78.840 293 54 6 4533 4820 692347215 692346926 3.190000e-44 191.0
40 TraesCS5D01G213300 chr3A 92.000 125 8 2 6972 7095 12747903 12748026 3.210000e-39 174.0
41 TraesCS5D01G213300 chr3A 91.736 121 9 1 6976 7095 621323739 621323859 5.370000e-37 167.0
42 TraesCS5D01G213300 chr3D 95.556 180 8 0 2864 3043 360696001 360695822 1.100000e-73 289.0
43 TraesCS5D01G213300 chr3D 89.764 127 11 2 6970 7095 290858112 290858237 2.500000e-35 161.0
44 TraesCS5D01G213300 chr3D 92.063 63 3 2 6407 6468 427225726 427225787 4.300000e-13 87.9
45 TraesCS5D01G213300 chr3D 91.228 57 3 2 652 708 516391107 516391053 9.310000e-10 76.8
46 TraesCS5D01G213300 chr7B 84.669 287 36 5 4544 4827 709523975 709523694 6.610000e-71 279.0
47 TraesCS5D01G213300 chr6D 90.909 165 13 2 4533 4697 407533805 407533643 4.060000e-53 220.0
48 TraesCS5D01G213300 chr6D 86.441 59 8 0 6425 6483 8984700 8984642 2.010000e-06 65.8
49 TraesCS5D01G213300 chr2A 82.072 251 41 2 4576 4822 591275391 591275641 2.450000e-50 211.0
50 TraesCS5D01G213300 chr1A 80.077 261 47 4 4524 4779 33407872 33407612 1.150000e-43 189.0
51 TraesCS5D01G213300 chr1B 83.415 205 28 4 4635 4834 385299953 385299750 1.480000e-42 185.0
52 TraesCS5D01G213300 chr7A 93.443 122 7 1 6975 7095 498590386 498590265 6.900000e-41 180.0
53 TraesCS5D01G213300 chr4A 91.667 120 8 2 6977 7095 477033207 477033325 1.930000e-36 165.0
54 TraesCS5D01G213300 chr4A 93.182 44 2 1 661 704 45208799 45208757 7.250000e-06 63.9
55 TraesCS5D01G213300 chr4A 94.737 38 2 0 599 636 114480349 114480312 9.370000e-05 60.2
56 TraesCS5D01G213300 chr6A 90.323 124 11 1 6973 7095 352665800 352665677 2.500000e-35 161.0
57 TraesCS5D01G213300 chr6A 90.741 54 3 2 655 708 48913626 48913677 4.330000e-08 71.3
58 TraesCS5D01G213300 chr7D 100.000 50 0 0 6420 6469 46702739 46702690 9.240000e-15 93.5
59 TraesCS5D01G213300 chr7D 92.982 57 2 2 652 708 535551541 535551487 2.000000e-11 82.4
60 TraesCS5D01G213300 chr7D 88.889 63 4 3 6407 6468 523077232 523077292 3.350000e-09 75.0
61 TraesCS5D01G213300 chr7D 97.368 38 1 0 599 636 535551674 535551637 2.010000e-06 65.8
62 TraesCS5D01G213300 chr3B 90.909 66 4 2 6406 6469 557093101 557093166 4.300000e-13 87.9
63 TraesCS5D01G213300 chr1D 94.643 56 2 1 6414 6469 491045740 491045794 1.550000e-12 86.1
64 TraesCS5D01G213300 chr2B 89.831 59 4 2 6428 6484 89556413 89556355 3.350000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G213300 chr5D 322382061 322390705 8644 False 15965.000000 15965 100.0000 1 8645 1 chr5D.!!$F2 8644
1 TraesCS5D01G213300 chr5A 417896133 417904437 8304 False 1717.571429 3755 93.9380 1 8645 7 chr5A.!!$F3 8644
2 TraesCS5D01G213300 chr5B 373682899 373691131 8232 False 1514.625000 3271 93.4865 1 8645 8 chr5B.!!$F1 8644

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
862 893 0.036671 GGTTTTCCGGACCGTGAGAT 60.037 55.000 13.94 0.00 0.00 2.75 F
1862 1909 0.179702 TCCAGATCCAGCATGCAGTC 59.820 55.000 21.98 11.58 31.97 3.51 F
2102 2150 1.100510 AGTATTGTGCTGCATGCCTG 58.899 50.000 16.68 9.38 42.00 4.85 F
3331 3381 1.273048 TGCAACTGCCAATCAATGACC 59.727 47.619 0.00 0.00 41.18 4.02 F
3960 4027 0.038892 CACATTGCACCTGCTGTTCC 60.039 55.000 0.00 0.00 42.66 3.62 F
3991 4059 0.389025 CCTGTGTTGGCTTGTTTCCC 59.611 55.000 0.00 0.00 0.00 3.97 F
5649 5838 1.028905 GGTTGCTGTACTGTTTGCCA 58.971 50.000 1.46 0.00 0.00 4.92 F
6176 6365 0.308376 TTAAAACAGAACGGCGGCAC 59.692 50.000 13.24 1.57 0.00 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2191 2240 0.179054 GTTACCGCTCAATCCCCTCC 60.179 60.000 0.00 0.0 0.00 4.30 R
3312 3362 1.273048 TGGTCATTGATTGGCAGTTGC 59.727 47.619 0.00 0.0 41.14 4.17 R
3960 4027 2.542824 CCAACACAGGCCAAAAGTTACG 60.543 50.000 5.01 0.0 0.00 3.18 R
5313 5502 1.334869 AGAAGTTGAAAGCACGGCAAG 59.665 47.619 0.00 0.0 0.00 4.01 R
5801 5990 1.006519 CAGAAGGAGGAGGGACTGAGA 59.993 57.143 0.00 0.0 41.55 3.27 R
5809 5998 5.586643 GCTTTTAATGTACAGAAGGAGGAGG 59.413 44.000 0.33 0.0 0.00 4.30 R
6869 7105 1.403323 GCTTTGCTCTCCCAATGCTAC 59.597 52.381 5.77 0.0 40.60 3.58 R
7771 8078 0.547471 TGTCCTCCATTCTGAGCCCA 60.547 55.000 0.00 0.0 0.00 5.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
188 189 6.039605 GGAGTTGTAAGTGATCCTACCTAGAC 59.960 46.154 0.00 0.00 0.00 2.59
196 197 0.467384 TCCTACCTAGACGGTCCTCG 59.533 60.000 4.14 0.00 44.93 4.63
199 200 2.244117 TACCTAGACGGTCCTCGCGT 62.244 60.000 5.77 0.00 44.93 6.01
204 205 3.948086 GACGGTCCTCGCGTCACTG 62.948 68.421 5.77 8.98 43.89 3.66
308 313 8.208718 TGTGAATGGCTAATGTATCTTGTAAC 57.791 34.615 0.00 0.00 0.00 2.50
399 405 2.045926 GAGCGCCCCATTCTGTGT 60.046 61.111 2.29 0.00 0.00 3.72
436 442 1.211457 GATCCTGGATGGTGCAGTTCT 59.789 52.381 15.25 0.00 33.66 3.01
450 456 4.570772 GTGCAGTTCTGTTCAGTTCTGTTA 59.429 41.667 18.55 11.29 0.00 2.41
451 457 4.570772 TGCAGTTCTGTTCAGTTCTGTTAC 59.429 41.667 18.55 1.46 0.00 2.50
458 469 2.450609 TCAGTTCTGTTACGAAGGCC 57.549 50.000 0.00 0.00 0.00 5.19
562 574 7.333672 ACACTTTCGGTCCATTTTTATCTCTAC 59.666 37.037 0.00 0.00 0.00 2.59
565 577 9.765795 CTTTCGGTCCATTTTTATCTCTACTAT 57.234 33.333 0.00 0.00 0.00 2.12
596 611 2.184579 GGCACGGTGGTAGAGAGC 59.815 66.667 10.60 0.00 0.00 4.09
597 612 2.352032 GGCACGGTGGTAGAGAGCT 61.352 63.158 10.60 0.00 0.00 4.09
598 613 1.592223 GCACGGTGGTAGAGAGCTT 59.408 57.895 10.60 0.00 0.00 3.74
599 614 0.737715 GCACGGTGGTAGAGAGCTTG 60.738 60.000 10.60 0.00 0.00 4.01
600 615 0.108615 CACGGTGGTAGAGAGCTTGG 60.109 60.000 0.00 0.00 0.00 3.61
601 616 1.258445 ACGGTGGTAGAGAGCTTGGG 61.258 60.000 0.00 0.00 0.00 4.12
602 617 1.908483 GGTGGTAGAGAGCTTGGGG 59.092 63.158 0.00 0.00 0.00 4.96
603 618 1.222113 GTGGTAGAGAGCTTGGGGC 59.778 63.158 0.00 0.00 42.19 5.80
616 631 2.939353 GGGGCTACCAACCAGGGT 60.939 66.667 0.00 0.00 43.89 4.34
617 632 2.544745 GGGGCTACCAACCAGGGTT 61.545 63.158 0.00 0.00 43.89 4.11
618 633 1.001269 GGGCTACCAACCAGGGTTC 60.001 63.158 0.00 0.00 43.89 3.62
619 634 1.765074 GGCTACCAACCAGGGTTCA 59.235 57.895 0.00 0.00 43.89 3.18
620 635 0.111639 GGCTACCAACCAGGGTTCAA 59.888 55.000 0.00 0.00 43.89 2.69
621 636 1.479757 GGCTACCAACCAGGGTTCAAA 60.480 52.381 0.00 0.00 43.89 2.69
622 637 2.525368 GCTACCAACCAGGGTTCAAAT 58.475 47.619 0.00 0.00 43.89 2.32
623 638 2.492088 GCTACCAACCAGGGTTCAAATC 59.508 50.000 0.00 0.00 43.89 2.17
624 639 2.009681 ACCAACCAGGGTTCAAATCC 57.990 50.000 0.00 0.00 43.89 3.01
625 640 1.503347 ACCAACCAGGGTTCAAATCCT 59.497 47.619 0.00 0.00 41.23 3.24
632 647 3.441500 AGGGTTCAAATCCTGGTTCTC 57.558 47.619 0.00 0.00 38.36 2.87
633 648 2.084546 GGGTTCAAATCCTGGTTCTCG 58.915 52.381 0.00 0.00 0.00 4.04
634 649 1.468914 GGTTCAAATCCTGGTTCTCGC 59.531 52.381 0.00 0.00 0.00 5.03
635 650 2.151202 GTTCAAATCCTGGTTCTCGCA 58.849 47.619 0.00 0.00 0.00 5.10
636 651 2.749621 GTTCAAATCCTGGTTCTCGCAT 59.250 45.455 0.00 0.00 0.00 4.73
637 652 2.358957 TCAAATCCTGGTTCTCGCATG 58.641 47.619 0.00 0.00 0.00 4.06
638 653 2.086869 CAAATCCTGGTTCTCGCATGT 58.913 47.619 0.00 0.00 0.00 3.21
639 654 2.489329 CAAATCCTGGTTCTCGCATGTT 59.511 45.455 0.00 0.00 0.00 2.71
640 655 2.029838 ATCCTGGTTCTCGCATGTTC 57.970 50.000 0.00 0.00 0.00 3.18
641 656 0.389817 TCCTGGTTCTCGCATGTTCG 60.390 55.000 0.00 0.00 0.00 3.95
642 657 1.421485 CTGGTTCTCGCATGTTCGC 59.579 57.895 0.00 0.00 0.00 4.70
643 658 1.970917 CTGGTTCTCGCATGTTCGCC 61.971 60.000 0.00 0.00 0.00 5.54
644 659 2.395690 GTTCTCGCATGTTCGCCG 59.604 61.111 0.00 0.00 0.00 6.46
645 660 3.487202 TTCTCGCATGTTCGCCGC 61.487 61.111 0.00 0.00 0.00 6.53
649 664 3.626244 CGCATGTTCGCCGCGTAT 61.626 61.111 13.39 3.53 43.86 3.06
650 665 2.053116 GCATGTTCGCCGCGTATG 60.053 61.111 13.39 15.73 0.00 2.39
651 666 2.053116 CATGTTCGCCGCGTATGC 60.053 61.111 13.39 0.00 37.91 3.14
652 667 2.202878 ATGTTCGCCGCGTATGCT 60.203 55.556 13.39 0.00 39.65 3.79
653 668 1.813753 ATGTTCGCCGCGTATGCTT 60.814 52.632 13.39 0.00 39.65 3.91
654 669 2.021380 GTTCGCCGCGTATGCTTG 59.979 61.111 13.39 0.00 39.65 4.01
655 670 2.125872 TTCGCCGCGTATGCTTGA 60.126 55.556 13.39 0.00 39.65 3.02
656 671 2.449525 TTCGCCGCGTATGCTTGAC 61.450 57.895 13.39 0.00 39.65 3.18
657 672 3.925238 CGCCGCGTATGCTTGACC 61.925 66.667 4.92 0.00 39.65 4.02
658 673 2.511600 GCCGCGTATGCTTGACCT 60.512 61.111 4.92 0.00 39.65 3.85
659 674 2.106683 GCCGCGTATGCTTGACCTT 61.107 57.895 4.92 0.00 39.65 3.50
660 675 1.644786 GCCGCGTATGCTTGACCTTT 61.645 55.000 4.92 0.00 39.65 3.11
661 676 1.647346 CCGCGTATGCTTGACCTTTA 58.353 50.000 4.92 0.00 39.65 1.85
662 677 1.326548 CCGCGTATGCTTGACCTTTAC 59.673 52.381 4.92 0.00 39.65 2.01
663 678 1.326548 CGCGTATGCTTGACCTTTACC 59.673 52.381 5.20 0.00 39.65 2.85
664 679 2.352388 GCGTATGCTTGACCTTTACCA 58.648 47.619 0.00 0.00 38.39 3.25
665 680 2.943033 GCGTATGCTTGACCTTTACCAT 59.057 45.455 0.00 0.00 38.39 3.55
666 681 4.124238 GCGTATGCTTGACCTTTACCATA 58.876 43.478 0.00 0.00 38.39 2.74
667 682 4.755123 GCGTATGCTTGACCTTTACCATAT 59.245 41.667 0.00 0.00 38.39 1.78
668 683 5.929992 GCGTATGCTTGACCTTTACCATATA 59.070 40.000 0.00 0.00 38.39 0.86
669 684 6.425721 GCGTATGCTTGACCTTTACCATATAA 59.574 38.462 0.00 0.00 38.39 0.98
670 685 7.119262 GCGTATGCTTGACCTTTACCATATAAT 59.881 37.037 0.00 0.00 38.39 1.28
671 686 8.443160 CGTATGCTTGACCTTTACCATATAATG 58.557 37.037 0.00 0.00 0.00 1.90
672 687 6.633500 TGCTTGACCTTTACCATATAATGC 57.367 37.500 0.00 0.00 0.00 3.56
673 688 5.534654 TGCTTGACCTTTACCATATAATGCC 59.465 40.000 0.00 0.00 0.00 4.40
674 689 5.770162 GCTTGACCTTTACCATATAATGCCT 59.230 40.000 0.00 0.00 0.00 4.75
675 690 6.265422 GCTTGACCTTTACCATATAATGCCTT 59.735 38.462 0.00 0.00 0.00 4.35
676 691 7.522236 GCTTGACCTTTACCATATAATGCCTTC 60.522 40.741 0.00 0.00 0.00 3.46
677 692 5.995282 TGACCTTTACCATATAATGCCTTCG 59.005 40.000 0.00 0.00 0.00 3.79
678 693 5.313712 ACCTTTACCATATAATGCCTTCGG 58.686 41.667 0.00 0.00 0.00 4.30
679 694 4.700213 CCTTTACCATATAATGCCTTCGGG 59.300 45.833 0.00 0.00 38.37 5.14
680 695 5.514136 CCTTTACCATATAATGCCTTCGGGA 60.514 44.000 0.00 0.00 37.25 5.14
681 696 5.772393 TTACCATATAATGCCTTCGGGAT 57.228 39.130 0.00 0.00 34.48 3.85
682 697 4.657814 ACCATATAATGCCTTCGGGATT 57.342 40.909 5.02 5.02 45.42 3.01
683 698 4.998051 ACCATATAATGCCTTCGGGATTT 58.002 39.130 4.96 0.00 40.83 2.17
684 699 5.010282 ACCATATAATGCCTTCGGGATTTC 58.990 41.667 4.96 0.00 40.83 2.17
685 700 5.222130 ACCATATAATGCCTTCGGGATTTCT 60.222 40.000 4.96 0.00 40.83 2.52
686 701 5.355350 CCATATAATGCCTTCGGGATTTCTC 59.645 44.000 4.96 0.00 40.83 2.87
687 702 4.713792 ATAATGCCTTCGGGATTTCTCT 57.286 40.909 4.96 0.00 40.83 3.10
688 703 2.629336 ATGCCTTCGGGATTTCTCTC 57.371 50.000 0.00 0.00 37.25 3.20
689 704 0.541863 TGCCTTCGGGATTTCTCTCC 59.458 55.000 0.00 0.00 37.25 3.71
697 712 1.299939 GGATTTCTCTCCCCTTGGGT 58.700 55.000 4.84 0.00 44.74 4.51
698 713 1.213182 GGATTTCTCTCCCCTTGGGTC 59.787 57.143 4.84 0.00 44.74 4.46
699 714 2.200955 GATTTCTCTCCCCTTGGGTCT 58.799 52.381 4.84 0.00 44.74 3.85
700 715 1.362224 TTTCTCTCCCCTTGGGTCTG 58.638 55.000 4.84 0.00 44.74 3.51
701 716 0.491823 TTCTCTCCCCTTGGGTCTGA 59.508 55.000 4.84 0.00 44.74 3.27
702 717 0.041833 TCTCTCCCCTTGGGTCTGAG 59.958 60.000 4.84 8.73 44.74 3.35
703 718 0.252467 CTCTCCCCTTGGGTCTGAGT 60.252 60.000 4.84 0.00 44.74 3.41
704 719 1.007238 CTCTCCCCTTGGGTCTGAGTA 59.993 57.143 4.84 0.00 44.74 2.59
705 720 1.651770 TCTCCCCTTGGGTCTGAGTAT 59.348 52.381 4.84 0.00 44.74 2.12
706 721 2.045885 TCTCCCCTTGGGTCTGAGTATT 59.954 50.000 4.84 0.00 44.74 1.89
707 722 2.846827 CTCCCCTTGGGTCTGAGTATTT 59.153 50.000 4.84 0.00 44.74 1.40
708 723 2.844348 TCCCCTTGGGTCTGAGTATTTC 59.156 50.000 4.84 0.00 44.74 2.17
709 724 2.420129 CCCCTTGGGTCTGAGTATTTCG 60.420 54.545 4.84 0.00 38.25 3.46
710 725 2.236395 CCCTTGGGTCTGAGTATTTCGT 59.764 50.000 0.00 0.00 0.00 3.85
711 726 3.449737 CCCTTGGGTCTGAGTATTTCGTA 59.550 47.826 0.00 0.00 0.00 3.43
712 727 4.430908 CCTTGGGTCTGAGTATTTCGTAC 58.569 47.826 0.00 0.00 0.00 3.67
713 728 4.159879 CCTTGGGTCTGAGTATTTCGTACT 59.840 45.833 0.00 0.00 46.27 2.73
714 729 5.359009 CCTTGGGTCTGAGTATTTCGTACTA 59.641 44.000 0.00 0.00 43.66 1.82
715 730 6.040616 CCTTGGGTCTGAGTATTTCGTACTAT 59.959 42.308 0.00 0.00 43.66 2.12
716 731 7.230108 CCTTGGGTCTGAGTATTTCGTACTATA 59.770 40.741 0.00 0.00 43.66 1.31
717 732 7.741027 TGGGTCTGAGTATTTCGTACTATAG 57.259 40.000 0.00 0.00 43.66 1.31
718 733 6.206243 TGGGTCTGAGTATTTCGTACTATAGC 59.794 42.308 0.00 0.00 43.66 2.97
719 734 6.349197 GGGTCTGAGTATTTCGTACTATAGCC 60.349 46.154 0.00 0.00 43.66 3.93
720 735 6.349197 GGTCTGAGTATTTCGTACTATAGCCC 60.349 46.154 0.00 0.00 43.66 5.19
721 736 6.430616 GTCTGAGTATTTCGTACTATAGCCCT 59.569 42.308 0.00 0.00 43.66 5.19
722 737 7.002879 TCTGAGTATTTCGTACTATAGCCCTT 58.997 38.462 0.00 0.00 43.66 3.95
723 738 6.978338 TGAGTATTTCGTACTATAGCCCTTG 58.022 40.000 0.00 0.00 43.66 3.61
724 739 5.780984 AGTATTTCGTACTATAGCCCTTGC 58.219 41.667 0.00 0.00 41.84 4.01
744 759 0.329931 TCCCGGCAAGCAAATCCTTA 59.670 50.000 0.00 0.00 0.00 2.69
754 769 6.017109 GGCAAGCAAATCCTTATCGAAATAGA 60.017 38.462 0.00 0.00 0.00 1.98
755 770 6.853362 GCAAGCAAATCCTTATCGAAATAGAC 59.147 38.462 0.00 0.00 0.00 2.59
756 771 7.254932 GCAAGCAAATCCTTATCGAAATAGACT 60.255 37.037 0.00 0.00 0.00 3.24
757 772 7.721286 AGCAAATCCTTATCGAAATAGACTG 57.279 36.000 0.00 0.00 0.00 3.51
758 773 7.500992 AGCAAATCCTTATCGAAATAGACTGA 58.499 34.615 0.00 0.00 0.00 3.41
759 774 7.987458 AGCAAATCCTTATCGAAATAGACTGAA 59.013 33.333 0.00 0.00 0.00 3.02
760 775 8.778358 GCAAATCCTTATCGAAATAGACTGAAT 58.222 33.333 0.00 0.00 0.00 2.57
763 778 9.703892 AATCCTTATCGAAATAGACTGAATCAG 57.296 33.333 8.98 8.98 37.52 2.90
764 779 8.465273 TCCTTATCGAAATAGACTGAATCAGA 57.535 34.615 18.20 0.00 35.18 3.27
766 781 7.324856 CCTTATCGAAATAGACTGAATCAGACG 59.675 40.741 18.20 9.98 35.18 4.18
767 782 5.813080 TCGAAATAGACTGAATCAGACGA 57.187 39.130 18.20 7.65 35.18 4.20
769 784 6.258899 TCGAAATAGACTGAATCAGACGAAG 58.741 40.000 18.20 2.94 35.18 3.79
770 785 5.052040 CGAAATAGACTGAATCAGACGAAGC 60.052 44.000 18.20 2.11 35.18 3.86
771 786 5.590530 AATAGACTGAATCAGACGAAGCT 57.409 39.130 18.20 6.52 35.18 3.74
821 852 3.676049 GCCAAGAAAGGGAAATAAAGCGG 60.676 47.826 0.00 0.00 0.00 5.52
833 864 1.209621 TAAAGCGGTGGCCTTATCCT 58.790 50.000 3.32 0.00 41.24 3.24
839 870 1.340600 CGGTGGCCTTATCCTGGAAAA 60.341 52.381 3.32 0.00 0.00 2.29
860 891 3.961729 GGTTTTCCGGACCGTGAG 58.038 61.111 13.94 0.00 0.00 3.51
861 892 1.368579 GGTTTTCCGGACCGTGAGA 59.631 57.895 13.94 0.00 0.00 3.27
862 893 0.036671 GGTTTTCCGGACCGTGAGAT 60.037 55.000 13.94 0.00 0.00 2.75
863 894 1.205417 GGTTTTCCGGACCGTGAGATA 59.795 52.381 13.94 0.00 0.00 1.98
864 895 2.159000 GGTTTTCCGGACCGTGAGATAT 60.159 50.000 13.94 0.00 0.00 1.63
870 901 2.296190 CCGGACCGTGAGATATGATGAA 59.704 50.000 13.94 0.00 0.00 2.57
900 931 1.356270 CAAGCACACGAGCAGCAAA 59.644 52.632 0.00 0.00 36.85 3.68
902 933 0.248621 AAGCACACGAGCAGCAAAAC 60.249 50.000 0.00 0.00 36.85 2.43
903 934 1.063972 GCACACGAGCAGCAAAACA 59.936 52.632 0.00 0.00 0.00 2.83
1174 1206 2.022129 CTCAAGCTCGACGGCGTTT 61.022 57.895 16.19 0.00 38.98 3.60
1207 1239 1.134788 CCTGGTGGTAAGTTAGCCGAG 60.135 57.143 9.51 7.39 0.00 4.63
1242 1275 1.657804 ACCCCATACCCTAGCTATGC 58.342 55.000 0.00 0.00 0.00 3.14
1244 1277 1.656587 CCCATACCCTAGCTATGCCA 58.343 55.000 0.00 0.00 0.00 4.92
1245 1278 1.279271 CCCATACCCTAGCTATGCCAC 59.721 57.143 0.00 0.00 0.00 5.01
1246 1279 1.977854 CCATACCCTAGCTATGCCACA 59.022 52.381 0.00 0.00 0.00 4.17
1251 1286 1.202698 CCCTAGCTATGCCACACTTCC 60.203 57.143 0.00 0.00 0.00 3.46
1252 1287 1.486310 CCTAGCTATGCCACACTTCCA 59.514 52.381 0.00 0.00 0.00 3.53
1461 1505 2.135933 GCTGGCACGTTATAGATGGAC 58.864 52.381 0.00 0.00 0.00 4.02
1487 1531 3.308438 AGCTGCAATCCAATTGAACAC 57.692 42.857 7.12 0.00 42.83 3.32
1503 1548 1.874019 CACGCAGATTCGGGTCTCG 60.874 63.158 0.00 0.00 40.90 4.04
1522 1567 2.487762 TCGACAGTTTGGGAAATGATGC 59.512 45.455 0.00 0.00 35.02 3.91
1526 1571 5.231702 ACAGTTTGGGAAATGATGCATTT 57.768 34.783 0.00 5.17 45.25 2.32
1744 1791 3.995506 CTGAACCATGCCCGGACCC 62.996 68.421 0.73 0.00 0.00 4.46
1767 1814 1.269166 CAATACTCACGGACGCACTC 58.731 55.000 0.00 0.00 0.00 3.51
1820 1867 2.114411 GGCCTGACCCCGTTCAAA 59.886 61.111 0.00 0.00 0.00 2.69
1862 1909 0.179702 TCCAGATCCAGCATGCAGTC 59.820 55.000 21.98 11.58 31.97 3.51
2030 2077 4.003648 GCTAAGACCATGTGCTTACTGTT 58.996 43.478 0.00 0.00 0.00 3.16
2042 2089 7.275888 TGTGCTTACTGTTCATCTTTCATTT 57.724 32.000 0.00 0.00 0.00 2.32
2099 2147 3.624861 AGTTCTAGTATTGTGCTGCATGC 59.375 43.478 11.82 11.82 43.25 4.06
2100 2148 2.564771 TCTAGTATTGTGCTGCATGCC 58.435 47.619 16.68 0.28 42.00 4.40
2101 2149 2.171237 TCTAGTATTGTGCTGCATGCCT 59.829 45.455 16.68 3.82 42.00 4.75
2102 2150 1.100510 AGTATTGTGCTGCATGCCTG 58.899 50.000 16.68 9.38 42.00 4.85
2144 2192 7.913674 TGTATGTAAGTGTTCATTGCACATA 57.086 32.000 0.00 0.00 39.17 2.29
2197 2246 2.532250 AAGTAAAGCCATTGGAGGGG 57.468 50.000 6.95 0.00 0.00 4.79
2377 2426 2.233271 CTCAACAAATCTGCAGGGTGT 58.767 47.619 15.13 12.51 0.00 4.16
2384 2433 3.733443 AATCTGCAGGGTGTTTTTCAC 57.267 42.857 15.13 0.00 45.47 3.18
2444 2493 2.592102 TTCTCATTGCCTGCTCCTTT 57.408 45.000 0.00 0.00 0.00 3.11
2871 2921 8.911662 GGCAAAACTGTAATTGTACTTGTATTG 58.088 33.333 0.00 0.00 0.00 1.90
2872 2922 9.458374 GCAAAACTGTAATTGTACTTGTATTGT 57.542 29.630 0.00 0.00 0.00 2.71
2877 2927 9.649167 ACTGTAATTGTACTTGTATTGTACTCC 57.351 33.333 0.00 0.00 40.44 3.85
2878 2928 9.095065 CTGTAATTGTACTTGTATTGTACTCCC 57.905 37.037 0.00 0.00 40.44 4.30
2879 2929 8.818860 TGTAATTGTACTTGTATTGTACTCCCT 58.181 33.333 0.00 0.00 40.44 4.20
2880 2930 9.310716 GTAATTGTACTTGTATTGTACTCCCTC 57.689 37.037 0.00 0.00 40.44 4.30
2881 2931 5.927281 TGTACTTGTATTGTACTCCCTCC 57.073 43.478 0.00 0.00 40.44 4.30
2882 2932 4.400251 TGTACTTGTATTGTACTCCCTCCG 59.600 45.833 0.00 0.00 40.44 4.63
2883 2933 3.438183 ACTTGTATTGTACTCCCTCCGT 58.562 45.455 0.00 0.00 0.00 4.69
2884 2934 3.836562 ACTTGTATTGTACTCCCTCCGTT 59.163 43.478 0.00 0.00 0.00 4.44
2885 2935 4.081807 ACTTGTATTGTACTCCCTCCGTTC 60.082 45.833 0.00 0.00 0.00 3.95
2886 2936 2.762327 TGTATTGTACTCCCTCCGTTCC 59.238 50.000 0.00 0.00 0.00 3.62
2887 2937 2.249309 ATTGTACTCCCTCCGTTCCT 57.751 50.000 0.00 0.00 0.00 3.36
2888 2938 2.905415 TTGTACTCCCTCCGTTCCTA 57.095 50.000 0.00 0.00 0.00 2.94
2889 2939 2.905415 TGTACTCCCTCCGTTCCTAA 57.095 50.000 0.00 0.00 0.00 2.69
2890 2940 3.173953 TGTACTCCCTCCGTTCCTAAA 57.826 47.619 0.00 0.00 0.00 1.85
2891 2941 3.716431 TGTACTCCCTCCGTTCCTAAAT 58.284 45.455 0.00 0.00 0.00 1.40
2892 2942 4.870636 TGTACTCCCTCCGTTCCTAAATA 58.129 43.478 0.00 0.00 0.00 1.40
2893 2943 5.461327 TGTACTCCCTCCGTTCCTAAATAT 58.539 41.667 0.00 0.00 0.00 1.28
2894 2944 5.901276 TGTACTCCCTCCGTTCCTAAATATT 59.099 40.000 0.00 0.00 0.00 1.28
2895 2945 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
2896 2946 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
2897 2947 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
2898 2948 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
2899 2949 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
2900 2950 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
2901 2951 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
2902 2952 7.122204 CCCTCCGTTCCTAAATATTTGTCTTTT 59.878 37.037 11.05 0.00 0.00 2.27
2903 2953 8.520351 CCTCCGTTCCTAAATATTTGTCTTTTT 58.480 33.333 11.05 0.00 0.00 1.94
2920 2970 9.965824 TTGTCTTTTTAGAGATTTGAAATGGAC 57.034 29.630 0.00 0.00 0.00 4.02
2921 2971 9.354673 TGTCTTTTTAGAGATTTGAAATGGACT 57.645 29.630 0.00 0.00 0.00 3.85
2937 2987 3.900971 TGGACTACCACATACGGATGTA 58.099 45.455 14.23 0.00 44.82 2.29
2938 2988 4.476297 TGGACTACCACATACGGATGTAT 58.524 43.478 14.23 7.46 44.82 2.29
2939 2989 5.633117 TGGACTACCACATACGGATGTATA 58.367 41.667 14.23 8.27 44.82 1.47
2940 2990 6.250711 TGGACTACCACATACGGATGTATAT 58.749 40.000 14.23 4.37 44.82 0.86
2941 2991 7.404481 TGGACTACCACATACGGATGTATATA 58.596 38.462 14.23 5.36 44.82 0.86
2942 2992 7.555195 TGGACTACCACATACGGATGTATATAG 59.445 40.741 14.23 16.35 44.82 1.31
2943 2993 7.772292 GGACTACCACATACGGATGTATATAGA 59.228 40.741 22.62 5.04 44.82 1.98
2944 2994 8.503458 ACTACCACATACGGATGTATATAGAC 57.497 38.462 22.62 0.00 44.82 2.59
2945 2995 8.105197 ACTACCACATACGGATGTATATAGACA 58.895 37.037 22.62 2.07 44.82 3.41
2946 2996 7.956328 ACCACATACGGATGTATATAGACAT 57.044 36.000 14.23 12.70 44.82 3.06
2948 2998 9.642343 ACCACATACGGATGTATATAGACATAT 57.358 33.333 14.23 5.08 44.82 1.78
2978 3028 7.138692 AGTGTAGATTCACTCATTTTGCTTC 57.861 36.000 0.00 0.00 44.07 3.86
2979 3029 6.017933 GTGTAGATTCACTCATTTTGCTTCG 58.982 40.000 0.00 0.00 35.68 3.79
2980 3030 5.700832 TGTAGATTCACTCATTTTGCTTCGT 59.299 36.000 0.00 0.00 0.00 3.85
2981 3031 6.871492 TGTAGATTCACTCATTTTGCTTCGTA 59.129 34.615 0.00 0.00 0.00 3.43
2982 3032 6.992063 AGATTCACTCATTTTGCTTCGTAT 57.008 33.333 0.00 0.00 0.00 3.06
2983 3033 6.779117 AGATTCACTCATTTTGCTTCGTATG 58.221 36.000 0.00 0.00 0.00 2.39
2984 3034 5.940192 TTCACTCATTTTGCTTCGTATGT 57.060 34.783 0.00 0.00 0.00 2.29
2985 3035 7.549134 AGATTCACTCATTTTGCTTCGTATGTA 59.451 33.333 0.00 0.00 0.00 2.29
2986 3036 6.647212 TCACTCATTTTGCTTCGTATGTAG 57.353 37.500 0.00 0.00 0.00 2.74
2987 3037 6.163476 TCACTCATTTTGCTTCGTATGTAGT 58.837 36.000 0.00 0.00 0.00 2.73
2988 3038 6.310467 TCACTCATTTTGCTTCGTATGTAGTC 59.690 38.462 0.00 0.00 0.00 2.59
2989 3039 6.090763 CACTCATTTTGCTTCGTATGTAGTCA 59.909 38.462 0.00 0.00 0.00 3.41
2990 3040 6.090898 ACTCATTTTGCTTCGTATGTAGTCAC 59.909 38.462 0.00 0.00 0.00 3.67
2991 3041 6.163476 TCATTTTGCTTCGTATGTAGTCACT 58.837 36.000 0.00 0.00 0.00 3.41
2992 3042 6.649141 TCATTTTGCTTCGTATGTAGTCACTT 59.351 34.615 0.00 0.00 0.00 3.16
2993 3043 5.839262 TTTGCTTCGTATGTAGTCACTTG 57.161 39.130 0.00 0.00 0.00 3.16
2994 3044 4.514781 TGCTTCGTATGTAGTCACTTGT 57.485 40.909 0.00 0.00 0.00 3.16
2995 3045 4.878439 TGCTTCGTATGTAGTCACTTGTT 58.122 39.130 0.00 0.00 0.00 2.83
2996 3046 6.016213 TGCTTCGTATGTAGTCACTTGTTA 57.984 37.500 0.00 0.00 0.00 2.41
2997 3047 6.448852 TGCTTCGTATGTAGTCACTTGTTAA 58.551 36.000 0.00 0.00 0.00 2.01
2998 3048 6.924612 TGCTTCGTATGTAGTCACTTGTTAAA 59.075 34.615 0.00 0.00 0.00 1.52
2999 3049 7.438757 TGCTTCGTATGTAGTCACTTGTTAAAA 59.561 33.333 0.00 0.00 0.00 1.52
3000 3050 8.440833 GCTTCGTATGTAGTCACTTGTTAAAAT 58.559 33.333 0.00 0.00 0.00 1.82
3001 3051 9.953825 CTTCGTATGTAGTCACTTGTTAAAATC 57.046 33.333 0.00 0.00 0.00 2.17
3002 3052 9.701098 TTCGTATGTAGTCACTTGTTAAAATCT 57.299 29.630 0.00 0.00 0.00 2.40
3003 3053 9.350357 TCGTATGTAGTCACTTGTTAAAATCTC 57.650 33.333 0.00 0.00 0.00 2.75
3004 3054 9.355215 CGTATGTAGTCACTTGTTAAAATCTCT 57.645 33.333 0.00 0.00 0.00 3.10
3028 3078 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
3029 3079 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
3030 3080 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
3031 3081 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
3032 3082 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
3033 3083 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
3203 3253 9.373603 TCCTTGCAAATCAAAATCTCATTAATG 57.626 29.630 9.29 9.29 33.65 1.90
3312 3362 5.921004 GCTTGATATCCAGTTAAGCTCTG 57.079 43.478 14.39 0.00 40.29 3.35
3331 3381 1.273048 TGCAACTGCCAATCAATGACC 59.727 47.619 0.00 0.00 41.18 4.02
3682 3733 7.620880 TCACTTATATACTTGTTTCTGCCTGT 58.379 34.615 0.00 0.00 0.00 4.00
3710 3761 7.201911 GGGTTTCTGAATACCTTTTATGGGATG 60.202 40.741 16.09 0.00 34.75 3.51
3960 4027 0.038892 CACATTGCACCTGCTGTTCC 60.039 55.000 0.00 0.00 42.66 3.62
3991 4059 0.389025 CCTGTGTTGGCTTGTTTCCC 59.611 55.000 0.00 0.00 0.00 3.97
4470 4547 6.607004 ACTAGTTTACAAGTGGTAGCATCT 57.393 37.500 0.00 0.00 32.49 2.90
4522 4599 6.015350 GCACTTAGCCATAGGTCAGAATACTA 60.015 42.308 0.00 0.00 37.23 1.82
4539 4618 7.721399 CAGAATACTATAGTGGGCCTTTGATTT 59.279 37.037 15.90 0.00 0.00 2.17
4637 4740 5.283294 TGAGTTTGTTTGATTGCATCACAG 58.717 37.500 0.00 0.00 39.39 3.66
4641 4744 4.933505 TGTTTGATTGCATCACAGGAAA 57.066 36.364 0.00 0.00 39.39 3.13
4642 4745 5.273674 TGTTTGATTGCATCACAGGAAAA 57.726 34.783 0.00 0.00 39.39 2.29
4643 4746 5.668471 TGTTTGATTGCATCACAGGAAAAA 58.332 33.333 0.00 0.00 39.39 1.94
4644 4747 5.523188 TGTTTGATTGCATCACAGGAAAAAC 59.477 36.000 0.00 0.00 39.39 2.43
4645 4748 4.933505 TGATTGCATCACAGGAAAAACA 57.066 36.364 0.00 0.00 33.59 2.83
4646 4749 5.273674 TGATTGCATCACAGGAAAAACAA 57.726 34.783 0.00 0.00 33.59 2.83
4647 4750 5.668471 TGATTGCATCACAGGAAAAACAAA 58.332 33.333 0.00 0.00 33.59 2.83
4648 4751 5.754406 TGATTGCATCACAGGAAAAACAAAG 59.246 36.000 0.00 0.00 33.59 2.77
4649 4752 4.998671 TGCATCACAGGAAAAACAAAGA 57.001 36.364 0.00 0.00 0.00 2.52
4650 4753 5.336150 TGCATCACAGGAAAAACAAAGAA 57.664 34.783 0.00 0.00 0.00 2.52
4651 4754 5.916318 TGCATCACAGGAAAAACAAAGAAT 58.084 33.333 0.00 0.00 0.00 2.40
4652 4755 6.347696 TGCATCACAGGAAAAACAAAGAATT 58.652 32.000 0.00 0.00 0.00 2.17
4653 4756 6.822676 TGCATCACAGGAAAAACAAAGAATTT 59.177 30.769 0.00 0.00 40.26 1.82
4654 4757 7.336427 TGCATCACAGGAAAAACAAAGAATTTT 59.664 29.630 0.00 0.00 35.03 1.82
4655 4758 8.183536 GCATCACAGGAAAAACAAAGAATTTTT 58.816 29.630 0.00 0.00 40.94 1.94
4793 4982 6.518516 TTCCTAAGGGTTCTACTCCAAAAA 57.481 37.500 0.00 0.00 0.00 1.94
4823 5012 8.694540 TGTGAAAATCTTTTGAATCAAAGAGGA 58.305 29.630 8.51 8.96 34.72 3.71
4838 5027 8.655935 ATCAAAGAGGACCTAACATTTGAATT 57.344 30.769 19.46 8.42 39.34 2.17
4971 5160 2.419297 CCATGGAGCAGTCCTCACTAAC 60.419 54.545 5.56 0.00 44.30 2.34
5094 5283 4.690122 AGCAATAAATTCATCTTGCAGGC 58.310 39.130 8.60 0.00 44.90 4.85
5271 5460 5.163322 TGCTCAGTTCCATTTTTCCAAATGT 60.163 36.000 6.87 0.00 45.57 2.71
5313 5502 7.341445 TGATTGGTAGCATTATTTTACCACC 57.659 36.000 0.00 0.00 44.72 4.61
5318 5507 4.736126 AGCATTATTTTACCACCTTGCC 57.264 40.909 0.00 0.00 0.00 4.52
5431 5620 1.944709 GGTACCGTTTGTGAGCTGTTT 59.055 47.619 0.00 0.00 0.00 2.83
5469 5658 4.957684 AAGCTTGTAGTCACCTAGTGTT 57.042 40.909 0.00 0.00 34.79 3.32
5481 5670 2.154462 CCTAGTGTTTGTGAAGGCCAG 58.846 52.381 5.01 0.00 0.00 4.85
5494 5683 8.450578 TTGTGAAGGCCAGTATGATTATTAAG 57.549 34.615 5.01 0.00 39.69 1.85
5526 5715 8.621532 TTGAAATATTGTTCAACTGCTAGTCT 57.378 30.769 0.00 0.00 41.45 3.24
5527 5716 9.719355 TTGAAATATTGTTCAACTGCTAGTCTA 57.281 29.630 0.00 0.00 41.45 2.59
5649 5838 1.028905 GGTTGCTGTACTGTTTGCCA 58.971 50.000 1.46 0.00 0.00 4.92
5675 5864 4.520492 TGGAGATTCTTTGAAAGGCTTGTC 59.480 41.667 0.00 1.46 0.00 3.18
5782 5971 5.385198 TGGTTCAAGGTTCTAAATGCTCTT 58.615 37.500 0.00 0.00 0.00 2.85
5792 5981 7.503902 AGGTTCTAAATGCTCTTTGTTTTCTCT 59.496 33.333 0.00 0.00 0.00 3.10
5793 5982 8.138074 GGTTCTAAATGCTCTTTGTTTTCTCTT 58.862 33.333 0.00 0.00 0.00 2.85
5809 5998 9.003658 TGTTTTCTCTTTTCATTATCTCAGTCC 57.996 33.333 0.00 0.00 0.00 3.85
5810 5999 8.454894 GTTTTCTCTTTTCATTATCTCAGTCCC 58.545 37.037 0.00 0.00 0.00 4.46
5811 6000 7.502060 TTCTCTTTTCATTATCTCAGTCCCT 57.498 36.000 0.00 0.00 0.00 4.20
6075 6264 4.318332 TGTTTCTGCTTGTCTACAGATGG 58.682 43.478 0.00 0.00 42.26 3.51
6168 6357 4.023963 GGTCACTGCCTCTTAAAACAGAAC 60.024 45.833 0.00 0.00 34.25 3.01
6172 6361 1.136057 GCCTCTTAAAACAGAACGGCG 60.136 52.381 4.80 4.80 27.68 6.46
6176 6365 0.308376 TTAAAACAGAACGGCGGCAC 59.692 50.000 13.24 1.57 0.00 5.01
6310 6499 1.002544 GTGTCTTGTTGAGGGAGGAGG 59.997 57.143 0.00 0.00 0.00 4.30
6386 6575 4.862902 AGTCGAATATGGAGGATGTCAG 57.137 45.455 0.00 0.00 0.00 3.51
6436 6625 4.876679 GCAAACTAATCAACTACTCCCTCC 59.123 45.833 0.00 0.00 0.00 4.30
6439 6628 3.952967 ACTAATCAACTACTCCCTCCGTC 59.047 47.826 0.00 0.00 0.00 4.79
6440 6629 1.777941 ATCAACTACTCCCTCCGTCC 58.222 55.000 0.00 0.00 0.00 4.79
6441 6630 0.324091 TCAACTACTCCCTCCGTCCC 60.324 60.000 0.00 0.00 0.00 4.46
6442 6631 0.613853 CAACTACTCCCTCCGTCCCA 60.614 60.000 0.00 0.00 0.00 4.37
6455 6644 4.440250 CCTCCGTCCCATAATATAAGAGCG 60.440 50.000 0.00 0.00 0.00 5.03
6459 6648 5.699458 CCGTCCCATAATATAAGAGCGTTTT 59.301 40.000 0.00 0.00 0.00 2.43
6460 6649 6.204108 CCGTCCCATAATATAAGAGCGTTTTT 59.796 38.462 0.00 0.00 0.00 1.94
6461 6650 7.069569 CGTCCCATAATATAAGAGCGTTTTTG 58.930 38.462 0.00 0.00 0.00 2.44
6462 6651 7.042321 CGTCCCATAATATAAGAGCGTTTTTGA 60.042 37.037 0.00 0.00 0.00 2.69
6463 6652 8.068380 GTCCCATAATATAAGAGCGTTTTTGAC 58.932 37.037 0.00 0.00 0.00 3.18
6836 7072 7.064966 GCTTATTTGTTTGCATGGAGCTAATTT 59.935 33.333 0.00 0.00 45.94 1.82
6944 7180 5.128919 AGAGGCTAAAGAATGTATGCTTGG 58.871 41.667 0.00 0.00 0.00 3.61
6999 7240 9.462606 AGTATTACCTCTTTCCCAAATTACTTG 57.537 33.333 0.00 0.00 34.52 3.16
7090 7336 7.333672 ACAAATCTAAGACAAGTAATTCGGGAC 59.666 37.037 0.00 0.00 0.00 4.46
7397 7704 6.805713 TCATGTTCTATGCGAGTAAGATTCA 58.194 36.000 0.00 0.00 0.00 2.57
7481 7788 5.582689 AGCTACATACTGATATATGCGCA 57.417 39.130 14.96 14.96 36.21 6.09
7554 7861 0.873054 CTTGCTCTGACAAGTGCCAG 59.127 55.000 10.09 0.00 41.74 4.85
7557 7864 0.952984 GCTCTGACAAGTGCCAGTCC 60.953 60.000 0.00 0.00 37.02 3.85
7649 7956 6.693545 CCATTAAGTGACATCGTCTAGAAGTC 59.306 42.308 5.55 7.14 45.09 3.01
7650 7957 4.705337 AAGTGACATCGTCTAGAAGTCC 57.295 45.455 5.55 2.33 44.47 3.85
7657 7964 4.220821 ACATCGTCTAGAAGTCCACATGTT 59.779 41.667 5.55 0.00 0.00 2.71
7712 8019 0.956633 AGCAGCAACACACTGATTGG 59.043 50.000 0.00 0.00 37.32 3.16
7753 8060 7.346751 ACTATTCTGGCTTTGAAGTTGAAAA 57.653 32.000 0.00 0.00 0.00 2.29
7795 8102 3.204526 GCTCAGAATGGAGGACATGAAG 58.795 50.000 0.00 0.00 40.44 3.02
7940 8253 0.978907 AATTTCCTGGCAAAGGCTGG 59.021 50.000 9.71 9.71 46.92 4.85
7975 8288 3.053619 ACCTGGACAGTTTTTGAGGAAGT 60.054 43.478 0.00 0.00 0.00 3.01
7976 8289 3.954258 CCTGGACAGTTTTTGAGGAAGTT 59.046 43.478 0.00 0.00 0.00 2.66
7989 8311 5.105567 TGAGGAAGTTGTGGTTCTTAACA 57.894 39.130 0.00 0.00 0.00 2.41
8010 8332 1.623811 TCTTAACAGCTGACAGGGGTC 59.376 52.381 23.35 0.00 44.57 4.46
8047 8371 4.635765 TGAACTGTTGTTTTCAGAGTCCAG 59.364 41.667 0.00 0.00 36.39 3.86
8149 8503 8.246180 CGTAGTTAGTTACCCATCTTTCTTGTA 58.754 37.037 0.00 0.00 0.00 2.41
8194 8556 6.070995 GCCTAGTACCTTGGTGCACATATATA 60.071 42.308 20.43 2.15 0.00 0.86
8338 8719 0.749454 ATCATGCGTGGGCCTTTCTC 60.749 55.000 4.53 0.00 38.85 2.87
8339 8720 2.044946 ATGCGTGGGCCTTTCTCC 60.045 61.111 4.53 0.00 38.85 3.71
8340 8721 2.606587 ATGCGTGGGCCTTTCTCCT 61.607 57.895 4.53 0.00 38.85 3.69
8341 8722 2.747855 GCGTGGGCCTTTCTCCTG 60.748 66.667 4.53 0.00 0.00 3.86
8342 8723 2.747855 CGTGGGCCTTTCTCCTGC 60.748 66.667 4.53 0.00 0.00 4.85
8343 8724 2.759795 GTGGGCCTTTCTCCTGCT 59.240 61.111 4.53 0.00 0.00 4.24
8387 8768 2.872557 CAGTACGAGAACGGGCGA 59.127 61.111 0.00 0.00 44.46 5.54
8475 8860 1.171308 CATGTCTTGTGCTTGGGGAG 58.829 55.000 0.00 0.00 0.00 4.30
8477 8862 1.303643 GTCTTGTGCTTGGGGAGGG 60.304 63.158 0.00 0.00 0.00 4.30
8478 8863 2.036256 CTTGTGCTTGGGGAGGGG 59.964 66.667 0.00 0.00 0.00 4.79
8482 8867 3.661648 TGCTTGGGGAGGGGCTTC 61.662 66.667 0.00 0.00 0.00 3.86
8483 8868 4.448976 GCTTGGGGAGGGGCTTCC 62.449 72.222 0.68 0.68 36.46 3.46
8528 8925 3.677648 CGTGACGGAAGGACGGGT 61.678 66.667 0.00 0.00 37.41 5.28
8595 8992 3.003763 GTCCAGGTCGCCTCCCTT 61.004 66.667 0.00 0.00 0.00 3.95
8614 9011 1.588674 TTGGTCGTTGCTTGTGTAGG 58.411 50.000 0.00 0.00 0.00 3.18
8640 9039 1.795170 TTTGCTGCCTCCGTCTTTGC 61.795 55.000 0.00 0.00 0.00 3.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 0.469144 TGTTTGAAACCTGGGGCTCC 60.469 55.000 5.50 0.00 0.00 4.70
61 62 3.077359 GTCTACTGCAGCATCCTTGTTT 58.923 45.455 15.27 0.00 0.00 2.83
188 189 3.553437 AACAGTGACGCGAGGACCG 62.553 63.158 15.93 0.47 42.21 4.79
204 205 4.874970 ACAGCAATTCAATCCTCACAAAC 58.125 39.130 0.00 0.00 0.00 2.93
308 313 1.686355 TTACTGGGGCAGTTGTTGTG 58.314 50.000 0.00 0.00 42.59 3.33
436 442 3.128349 GCCTTCGTAACAGAACTGAACA 58.872 45.455 8.87 0.00 0.00 3.18
450 456 2.922740 TACAAGTGAAAGGCCTTCGT 57.077 45.000 20.79 3.24 36.78 3.85
451 457 2.159517 GCATACAAGTGAAAGGCCTTCG 60.160 50.000 20.79 5.98 36.78 3.79
562 574 2.750350 CGGGGGCAAGGGCTATAG 59.250 66.667 0.00 0.00 40.87 1.31
583 598 1.517832 CCCAAGCTCTCTACCACCG 59.482 63.158 0.00 0.00 0.00 4.94
586 601 3.727387 GCCCCAAGCTCTCTACCA 58.273 61.111 0.00 0.00 38.99 3.25
598 613 2.938798 CCCTGGTTGGTAGCCCCA 60.939 66.667 0.00 1.08 43.27 4.96
599 614 2.494777 GAACCCTGGTTGGTAGCCCC 62.495 65.000 6.24 0.00 37.76 5.80
600 615 1.001269 GAACCCTGGTTGGTAGCCC 60.001 63.158 6.24 0.00 37.76 5.19
601 616 0.111639 TTGAACCCTGGTTGGTAGCC 59.888 55.000 6.24 0.00 37.76 3.93
602 617 1.989706 TTTGAACCCTGGTTGGTAGC 58.010 50.000 6.24 0.00 37.76 3.58
603 618 3.089284 GGATTTGAACCCTGGTTGGTAG 58.911 50.000 6.24 0.00 37.76 3.18
604 619 2.719705 AGGATTTGAACCCTGGTTGGTA 59.280 45.455 6.24 0.00 37.76 3.25
605 620 1.503347 AGGATTTGAACCCTGGTTGGT 59.497 47.619 6.24 0.00 41.55 3.67
606 621 1.895131 CAGGATTTGAACCCTGGTTGG 59.105 52.381 6.24 0.00 44.68 3.77
612 627 2.290323 CGAGAACCAGGATTTGAACCCT 60.290 50.000 0.00 0.00 0.00 4.34
613 628 2.084546 CGAGAACCAGGATTTGAACCC 58.915 52.381 0.00 0.00 0.00 4.11
614 629 1.468914 GCGAGAACCAGGATTTGAACC 59.531 52.381 0.00 0.00 0.00 3.62
615 630 2.151202 TGCGAGAACCAGGATTTGAAC 58.849 47.619 0.00 0.00 0.00 3.18
616 631 2.559698 TGCGAGAACCAGGATTTGAA 57.440 45.000 0.00 0.00 0.00 2.69
617 632 2.290260 ACATGCGAGAACCAGGATTTGA 60.290 45.455 0.00 0.00 0.00 2.69
618 633 2.086869 ACATGCGAGAACCAGGATTTG 58.913 47.619 0.00 0.00 0.00 2.32
619 634 2.496899 ACATGCGAGAACCAGGATTT 57.503 45.000 0.00 0.00 0.00 2.17
620 635 2.359900 GAACATGCGAGAACCAGGATT 58.640 47.619 0.00 0.00 0.00 3.01
621 636 1.740380 CGAACATGCGAGAACCAGGAT 60.740 52.381 0.00 0.00 0.00 3.24
622 637 0.389817 CGAACATGCGAGAACCAGGA 60.390 55.000 0.00 0.00 0.00 3.86
623 638 1.970917 GCGAACATGCGAGAACCAGG 61.971 60.000 0.00 0.00 0.00 4.45
624 639 1.421485 GCGAACATGCGAGAACCAG 59.579 57.895 0.00 0.00 0.00 4.00
625 640 2.032634 GGCGAACATGCGAGAACCA 61.033 57.895 0.00 0.00 35.06 3.67
626 641 2.785258 GGCGAACATGCGAGAACC 59.215 61.111 0.00 0.00 35.06 3.62
627 642 2.395690 CGGCGAACATGCGAGAAC 59.604 61.111 0.00 0.00 35.06 3.01
628 643 3.487202 GCGGCGAACATGCGAGAA 61.487 61.111 12.98 0.00 35.06 2.87
633 648 2.053116 CATACGCGGCGAACATGC 60.053 61.111 30.94 0.00 0.00 4.06
634 649 2.035617 AAGCATACGCGGCGAACATG 62.036 55.000 30.94 25.50 45.49 3.21
635 650 1.813753 AAGCATACGCGGCGAACAT 60.814 52.632 30.94 15.45 45.49 2.71
636 651 2.433491 AAGCATACGCGGCGAACA 60.433 55.556 30.94 13.75 45.49 3.18
637 652 2.021380 CAAGCATACGCGGCGAAC 59.979 61.111 30.94 14.32 45.49 3.95
638 653 2.125872 TCAAGCATACGCGGCGAA 60.126 55.556 30.94 0.00 45.49 4.70
639 654 2.883730 GTCAAGCATACGCGGCGA 60.884 61.111 30.94 13.17 45.49 5.54
640 655 3.925238 GGTCAAGCATACGCGGCG 61.925 66.667 22.36 22.36 45.49 6.46
641 656 1.644786 AAAGGTCAAGCATACGCGGC 61.645 55.000 12.47 3.95 45.49 6.53
642 657 1.326548 GTAAAGGTCAAGCATACGCGG 59.673 52.381 12.47 0.00 45.49 6.46
643 658 1.326548 GGTAAAGGTCAAGCATACGCG 59.673 52.381 3.53 3.53 45.49 6.01
644 659 2.352388 TGGTAAAGGTCAAGCATACGC 58.648 47.619 0.00 0.00 38.99 4.42
645 660 7.956420 TTATATGGTAAAGGTCAAGCATACG 57.044 36.000 0.00 0.00 38.49 3.06
646 661 8.237267 GCATTATATGGTAAAGGTCAAGCATAC 58.763 37.037 0.00 0.00 38.49 2.39
647 662 7.393234 GGCATTATATGGTAAAGGTCAAGCATA 59.607 37.037 0.00 0.00 39.58 3.14
648 663 6.209391 GGCATTATATGGTAAAGGTCAAGCAT 59.791 38.462 0.00 0.00 37.56 3.79
649 664 5.534654 GGCATTATATGGTAAAGGTCAAGCA 59.465 40.000 0.00 0.00 0.00 3.91
650 665 5.770162 AGGCATTATATGGTAAAGGTCAAGC 59.230 40.000 0.00 0.00 0.00 4.01
651 666 7.307989 CGAAGGCATTATATGGTAAAGGTCAAG 60.308 40.741 0.00 0.00 0.00 3.02
652 667 6.485313 CGAAGGCATTATATGGTAAAGGTCAA 59.515 38.462 0.00 0.00 0.00 3.18
653 668 5.995282 CGAAGGCATTATATGGTAAAGGTCA 59.005 40.000 0.00 0.00 0.00 4.02
654 669 5.411669 CCGAAGGCATTATATGGTAAAGGTC 59.588 44.000 0.00 0.00 46.14 3.85
655 670 5.313712 CCGAAGGCATTATATGGTAAAGGT 58.686 41.667 0.00 0.00 46.14 3.50
656 671 5.880054 CCGAAGGCATTATATGGTAAAGG 57.120 43.478 0.00 0.00 46.14 3.11
689 704 2.236395 ACGAAATACTCAGACCCAAGGG 59.764 50.000 2.91 2.91 42.03 3.95
690 705 3.611766 ACGAAATACTCAGACCCAAGG 57.388 47.619 0.00 0.00 0.00 3.61
691 706 5.326200 AGTACGAAATACTCAGACCCAAG 57.674 43.478 0.00 0.00 40.31 3.61
692 707 7.255381 GCTATAGTACGAAATACTCAGACCCAA 60.255 40.741 0.84 0.00 43.47 4.12
693 708 6.206243 GCTATAGTACGAAATACTCAGACCCA 59.794 42.308 0.84 0.00 43.47 4.51
694 709 6.349197 GGCTATAGTACGAAATACTCAGACCC 60.349 46.154 0.84 0.00 43.47 4.46
695 710 6.349197 GGGCTATAGTACGAAATACTCAGACC 60.349 46.154 0.84 5.28 42.72 3.85
696 711 6.430616 AGGGCTATAGTACGAAATACTCAGAC 59.569 42.308 0.84 0.00 43.47 3.51
697 712 6.540995 AGGGCTATAGTACGAAATACTCAGA 58.459 40.000 0.84 0.00 43.47 3.27
698 713 6.821031 AGGGCTATAGTACGAAATACTCAG 57.179 41.667 0.84 0.00 43.47 3.35
699 714 6.516194 GCAAGGGCTATAGTACGAAATACTCA 60.516 42.308 0.84 0.00 39.98 3.41
700 715 5.862860 GCAAGGGCTATAGTACGAAATACTC 59.137 44.000 0.84 0.00 39.98 2.59
701 716 5.780984 GCAAGGGCTATAGTACGAAATACT 58.219 41.667 0.84 0.00 41.32 2.12
723 738 2.491621 GATTTGCTTGCCGGGAGC 59.508 61.111 2.18 7.04 44.14 4.70
724 739 0.967380 AAGGATTTGCTTGCCGGGAG 60.967 55.000 2.18 0.00 0.00 4.30
744 759 6.378710 TCGTCTGATTCAGTCTATTTCGAT 57.621 37.500 13.23 0.00 32.61 3.59
754 769 2.669670 CGTCAGCTTCGTCTGATTCAGT 60.670 50.000 13.23 0.00 44.04 3.41
755 770 1.916651 CGTCAGCTTCGTCTGATTCAG 59.083 52.381 7.38 7.38 44.04 3.02
756 771 1.402852 CCGTCAGCTTCGTCTGATTCA 60.403 52.381 7.19 0.00 44.04 2.57
757 772 1.272781 CCGTCAGCTTCGTCTGATTC 58.727 55.000 7.19 0.00 44.04 2.52
758 773 0.737715 GCCGTCAGCTTCGTCTGATT 60.738 55.000 7.19 0.00 44.04 2.57
759 774 1.153745 GCCGTCAGCTTCGTCTGAT 60.154 57.895 7.19 0.00 44.04 2.90
760 775 2.258591 GCCGTCAGCTTCGTCTGA 59.741 61.111 7.19 1.79 40.50 3.27
761 776 3.175240 CGCCGTCAGCTTCGTCTG 61.175 66.667 7.19 0.00 40.39 3.51
763 778 2.876645 CTCGCCGTCAGCTTCGTC 60.877 66.667 7.19 0.00 40.39 4.20
764 779 4.421479 CCTCGCCGTCAGCTTCGT 62.421 66.667 7.19 0.00 40.39 3.85
766 781 1.374252 TTTCCTCGCCGTCAGCTTC 60.374 57.895 0.00 0.00 40.39 3.86
767 782 1.668151 GTTTCCTCGCCGTCAGCTT 60.668 57.895 0.00 0.00 40.39 3.74
769 784 3.119096 GGTTTCCTCGCCGTCAGC 61.119 66.667 0.00 0.00 38.52 4.26
770 785 2.027625 GTGGTTTCCTCGCCGTCAG 61.028 63.158 0.00 0.00 0.00 3.51
771 786 2.029964 GTGGTTTCCTCGCCGTCA 59.970 61.111 0.00 0.00 0.00 4.35
821 852 2.101415 GCATTTTCCAGGATAAGGCCAC 59.899 50.000 16.06 0.00 27.66 5.01
851 882 4.021104 TGGATTCATCATATCTCACGGTCC 60.021 45.833 0.00 0.00 0.00 4.46
859 890 6.598503 TGTCAGCTTTGGATTCATCATATCT 58.401 36.000 0.00 0.00 0.00 1.98
860 891 6.872628 TGTCAGCTTTGGATTCATCATATC 57.127 37.500 0.00 0.00 0.00 1.63
861 892 6.238953 GCTTGTCAGCTTTGGATTCATCATAT 60.239 38.462 0.00 0.00 43.51 1.78
862 893 5.066893 GCTTGTCAGCTTTGGATTCATCATA 59.933 40.000 0.00 0.00 43.51 2.15
863 894 4.142227 GCTTGTCAGCTTTGGATTCATCAT 60.142 41.667 0.00 0.00 43.51 2.45
864 895 3.192001 GCTTGTCAGCTTTGGATTCATCA 59.808 43.478 0.00 0.00 43.51 3.07
1177 1209 3.775654 CCACCAGGAGCGGGAGAC 61.776 72.222 0.00 0.00 36.89 3.36
1242 1275 0.535102 GTGGACTGGTGGAAGTGTGG 60.535 60.000 0.00 0.00 0.00 4.17
1244 1277 0.916086 TTGTGGACTGGTGGAAGTGT 59.084 50.000 0.00 0.00 0.00 3.55
1245 1278 2.276732 ATTGTGGACTGGTGGAAGTG 57.723 50.000 0.00 0.00 0.00 3.16
1246 1279 2.979678 ACTATTGTGGACTGGTGGAAGT 59.020 45.455 0.00 0.00 0.00 3.01
1251 1286 3.254060 CGAGAACTATTGTGGACTGGTG 58.746 50.000 0.00 0.00 0.00 4.17
1252 1287 2.233922 CCGAGAACTATTGTGGACTGGT 59.766 50.000 0.00 0.00 0.00 4.00
1461 1505 3.056393 TCAATTGGATTGCAGCTTTCCAG 60.056 43.478 14.28 6.38 40.48 3.86
1487 1531 2.798689 TCGAGACCCGAATCTGCG 59.201 61.111 0.00 0.00 45.43 5.18
1503 1548 3.940209 TGCATCATTTCCCAAACTGTC 57.060 42.857 0.00 0.00 0.00 3.51
1506 1551 5.231702 ACAAATGCATCATTTCCCAAACT 57.768 34.783 0.00 0.00 41.40 2.66
1522 1567 8.991243 ATGTTCTCAAATCACCAATACAAATG 57.009 30.769 0.00 0.00 0.00 2.32
1526 1571 5.652014 GGGATGTTCTCAAATCACCAATACA 59.348 40.000 0.00 0.00 0.00 2.29
1612 1658 3.870419 TGCGAAGAAAAAGCTTTTTGCAT 59.130 34.783 35.36 22.47 45.94 3.96
1767 1814 1.602377 GTTCGATAAAATCAGGGCGGG 59.398 52.381 0.00 0.00 0.00 6.13
1772 1819 4.790766 GCCATGCTGTTCGATAAAATCAGG 60.791 45.833 0.00 0.00 0.00 3.86
1862 1909 5.239525 GGGCTTATCCTTAGTGTTAATGCTG 59.760 44.000 0.00 0.00 34.39 4.41
1874 1921 3.181465 CGCAGAGAAAGGGCTTATCCTTA 60.181 47.826 0.00 0.00 45.67 2.69
1926 1973 2.703416 TCAACGCCTAGTCTTCTCGTA 58.297 47.619 0.00 0.00 32.71 3.43
2099 2147 1.027357 GCCAGTGATAACCATGCAGG 58.973 55.000 0.00 0.00 45.67 4.85
2100 2148 1.753930 TGCCAGTGATAACCATGCAG 58.246 50.000 0.00 0.00 0.00 4.41
2101 2149 2.025898 CATGCCAGTGATAACCATGCA 58.974 47.619 0.00 0.00 33.41 3.96
2102 2150 2.026641 ACATGCCAGTGATAACCATGC 58.973 47.619 0.00 0.00 37.41 4.06
2103 2151 4.823442 ACATACATGCCAGTGATAACCATG 59.177 41.667 0.00 0.00 39.23 3.66
2104 2152 5.052693 ACATACATGCCAGTGATAACCAT 57.947 39.130 0.00 0.00 0.00 3.55
2105 2153 4.502105 ACATACATGCCAGTGATAACCA 57.498 40.909 0.00 0.00 0.00 3.67
2106 2154 6.017934 CACTTACATACATGCCAGTGATAACC 60.018 42.308 12.80 0.00 40.75 2.85
2144 2192 1.991121 TCCGATGGCTATACCGAGTT 58.009 50.000 0.00 0.00 43.94 3.01
2179 2228 1.681229 TCCCCTCCAATGGCTTTACT 58.319 50.000 0.00 0.00 0.00 2.24
2181 2230 2.584965 TCAATCCCCTCCAATGGCTTTA 59.415 45.455 0.00 0.00 0.00 1.85
2183 2232 1.009997 TCAATCCCCTCCAATGGCTT 58.990 50.000 0.00 0.00 0.00 4.35
2184 2233 0.554792 CTCAATCCCCTCCAATGGCT 59.445 55.000 0.00 0.00 0.00 4.75
2185 2234 1.111715 GCTCAATCCCCTCCAATGGC 61.112 60.000 0.00 0.00 0.00 4.40
2186 2235 0.820891 CGCTCAATCCCCTCCAATGG 60.821 60.000 0.00 0.00 0.00 3.16
2187 2236 0.820891 CCGCTCAATCCCCTCCAATG 60.821 60.000 0.00 0.00 0.00 2.82
2188 2237 1.281925 ACCGCTCAATCCCCTCCAAT 61.282 55.000 0.00 0.00 0.00 3.16
2189 2238 0.619255 TACCGCTCAATCCCCTCCAA 60.619 55.000 0.00 0.00 0.00 3.53
2190 2239 0.619255 TTACCGCTCAATCCCCTCCA 60.619 55.000 0.00 0.00 0.00 3.86
2191 2240 0.179054 GTTACCGCTCAATCCCCTCC 60.179 60.000 0.00 0.00 0.00 4.30
2193 2242 0.541863 CAGTTACCGCTCAATCCCCT 59.458 55.000 0.00 0.00 0.00 4.79
2197 2246 2.674796 AGACCAGTTACCGCTCAATC 57.325 50.000 0.00 0.00 0.00 2.67
2267 2316 8.203485 GGTATAATTGGGCAATGAAGATGAAAA 58.797 33.333 0.00 0.00 0.00 2.29
2272 2321 6.239402 GCTTGGTATAATTGGGCAATGAAGAT 60.239 38.462 0.00 0.00 0.00 2.40
2377 2426 5.768164 GGAATAACCACAGAGGAGTGAAAAA 59.232 40.000 0.00 0.00 42.05 1.94
2444 2493 4.404073 ACACCTGGTAATTTTGAAGCAACA 59.596 37.500 0.00 0.00 0.00 3.33
2823 2873 5.938125 GCCTTGAAGAATTGTCAGTTACCTA 59.062 40.000 0.00 0.00 0.00 3.08
2871 2921 6.416631 AATATTTAGGAACGGAGGGAGTAC 57.583 41.667 0.00 0.00 0.00 2.73
2872 2922 6.384886 ACAAATATTTAGGAACGGAGGGAGTA 59.615 38.462 0.00 0.00 0.00 2.59
2873 2923 5.191124 ACAAATATTTAGGAACGGAGGGAGT 59.809 40.000 0.00 0.00 0.00 3.85
2874 2924 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
2875 2925 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
2876 2926 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
2877 2927 7.625828 AAAGACAAATATTTAGGAACGGAGG 57.374 36.000 0.00 0.00 0.00 4.30
2894 2944 9.965824 GTCCATTTCAAATCTCTAAAAAGACAA 57.034 29.630 0.00 0.00 0.00 3.18
2895 2945 9.354673 AGTCCATTTCAAATCTCTAAAAAGACA 57.645 29.630 0.00 0.00 0.00 3.41
2899 2949 9.581289 TGGTAGTCCATTTCAAATCTCTAAAAA 57.419 29.630 0.00 0.00 39.03 1.94
2900 2950 9.010029 GTGGTAGTCCATTTCAAATCTCTAAAA 57.990 33.333 0.00 0.00 46.20 1.52
2901 2951 8.160765 TGTGGTAGTCCATTTCAAATCTCTAAA 58.839 33.333 0.00 0.00 46.20 1.85
2902 2952 7.685481 TGTGGTAGTCCATTTCAAATCTCTAA 58.315 34.615 0.00 0.00 46.20 2.10
2903 2953 7.252612 TGTGGTAGTCCATTTCAAATCTCTA 57.747 36.000 0.00 0.00 46.20 2.43
2904 2954 6.126863 TGTGGTAGTCCATTTCAAATCTCT 57.873 37.500 0.00 0.00 46.20 3.10
2905 2955 7.254455 CGTATGTGGTAGTCCATTTCAAATCTC 60.254 40.741 0.00 0.00 46.20 2.75
2906 2956 6.538742 CGTATGTGGTAGTCCATTTCAAATCT 59.461 38.462 0.00 0.00 46.20 2.40
2907 2957 6.238374 CCGTATGTGGTAGTCCATTTCAAATC 60.238 42.308 0.00 0.00 46.20 2.17
2908 2958 5.588648 CCGTATGTGGTAGTCCATTTCAAAT 59.411 40.000 0.00 0.00 46.20 2.32
2909 2959 4.938832 CCGTATGTGGTAGTCCATTTCAAA 59.061 41.667 0.00 0.00 46.20 2.69
2910 2960 4.223255 TCCGTATGTGGTAGTCCATTTCAA 59.777 41.667 0.00 0.00 46.20 2.69
2911 2961 3.770388 TCCGTATGTGGTAGTCCATTTCA 59.230 43.478 0.00 0.00 46.20 2.69
2912 2962 4.395959 TCCGTATGTGGTAGTCCATTTC 57.604 45.455 0.00 0.00 46.20 2.17
2913 2963 4.163458 ACATCCGTATGTGGTAGTCCATTT 59.837 41.667 0.00 0.00 44.79 2.32
2914 2964 3.709653 ACATCCGTATGTGGTAGTCCATT 59.290 43.478 0.00 0.00 44.79 3.16
2915 2965 3.305720 ACATCCGTATGTGGTAGTCCAT 58.694 45.455 0.00 0.00 44.79 3.41
2916 2966 2.742348 ACATCCGTATGTGGTAGTCCA 58.258 47.619 0.00 0.00 44.79 4.02
2917 2967 6.770746 ATATACATCCGTATGTGGTAGTCC 57.229 41.667 3.56 0.00 45.99 3.85
2918 2968 8.610896 GTCTATATACATCCGTATGTGGTAGTC 58.389 40.741 3.56 0.00 45.99 2.59
2919 2969 8.105197 TGTCTATATACATCCGTATGTGGTAGT 58.895 37.037 3.56 0.00 45.99 2.73
2920 2970 8.502105 TGTCTATATACATCCGTATGTGGTAG 57.498 38.462 3.56 3.93 45.99 3.18
2922 2972 7.956328 ATGTCTATATACATCCGTATGTGGT 57.044 36.000 3.56 0.00 45.99 4.16
2955 3005 6.017933 CGAAGCAAAATGAGTGAATCTACAC 58.982 40.000 0.00 0.00 40.60 2.90
2956 3006 5.700832 ACGAAGCAAAATGAGTGAATCTACA 59.299 36.000 0.00 0.00 0.00 2.74
2957 3007 6.170675 ACGAAGCAAAATGAGTGAATCTAC 57.829 37.500 0.00 0.00 0.00 2.59
2958 3008 7.549134 ACATACGAAGCAAAATGAGTGAATCTA 59.451 33.333 0.00 0.00 0.00 1.98
2959 3009 6.372659 ACATACGAAGCAAAATGAGTGAATCT 59.627 34.615 0.00 0.00 0.00 2.40
2960 3010 6.546395 ACATACGAAGCAAAATGAGTGAATC 58.454 36.000 0.00 0.00 0.00 2.52
2961 3011 6.500684 ACATACGAAGCAAAATGAGTGAAT 57.499 33.333 0.00 0.00 0.00 2.57
2962 3012 5.940192 ACATACGAAGCAAAATGAGTGAA 57.060 34.783 0.00 0.00 0.00 3.18
2963 3013 6.163476 ACTACATACGAAGCAAAATGAGTGA 58.837 36.000 0.00 0.00 0.00 3.41
2964 3014 6.090763 TGACTACATACGAAGCAAAATGAGTG 59.909 38.462 0.00 0.00 0.00 3.51
2965 3015 6.090898 GTGACTACATACGAAGCAAAATGAGT 59.909 38.462 0.00 0.00 0.00 3.41
2966 3016 6.311445 AGTGACTACATACGAAGCAAAATGAG 59.689 38.462 0.00 0.00 0.00 2.90
2967 3017 6.163476 AGTGACTACATACGAAGCAAAATGA 58.837 36.000 0.00 0.00 0.00 2.57
2968 3018 6.408858 AGTGACTACATACGAAGCAAAATG 57.591 37.500 0.00 0.00 0.00 2.32
2969 3019 6.426937 ACAAGTGACTACATACGAAGCAAAAT 59.573 34.615 0.00 0.00 0.00 1.82
2970 3020 5.756347 ACAAGTGACTACATACGAAGCAAAA 59.244 36.000 0.00 0.00 0.00 2.44
2971 3021 5.294356 ACAAGTGACTACATACGAAGCAAA 58.706 37.500 0.00 0.00 0.00 3.68
2972 3022 4.878439 ACAAGTGACTACATACGAAGCAA 58.122 39.130 0.00 0.00 0.00 3.91
2973 3023 4.514781 ACAAGTGACTACATACGAAGCA 57.485 40.909 0.00 0.00 0.00 3.91
2974 3024 6.939551 TTAACAAGTGACTACATACGAAGC 57.060 37.500 0.00 0.00 0.00 3.86
2975 3025 9.953825 GATTTTAACAAGTGACTACATACGAAG 57.046 33.333 0.00 0.00 0.00 3.79
2976 3026 9.701098 AGATTTTAACAAGTGACTACATACGAA 57.299 29.630 0.00 0.00 0.00 3.85
2977 3027 9.350357 GAGATTTTAACAAGTGACTACATACGA 57.650 33.333 0.00 0.00 0.00 3.43
2978 3028 9.355215 AGAGATTTTAACAAGTGACTACATACG 57.645 33.333 0.00 0.00 0.00 3.06
3002 3052 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
3003 3053 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
3004 3054 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
3005 3055 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
3006 3056 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
3007 3057 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
3008 3058 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
3009 3059 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
3010 3060 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
3011 3061 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
3012 3062 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
3013 3063 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
3014 3064 6.557633 ACATACTCCCTCCGTTCCTAAATATT 59.442 38.462 0.00 0.00 0.00 1.28
3015 3065 6.082707 ACATACTCCCTCCGTTCCTAAATAT 58.917 40.000 0.00 0.00 0.00 1.28
3016 3066 5.461327 ACATACTCCCTCCGTTCCTAAATA 58.539 41.667 0.00 0.00 0.00 1.40
3017 3067 4.296056 ACATACTCCCTCCGTTCCTAAAT 58.704 43.478 0.00 0.00 0.00 1.40
3018 3068 3.716431 ACATACTCCCTCCGTTCCTAAA 58.284 45.455 0.00 0.00 0.00 1.85
3019 3069 3.393426 ACATACTCCCTCCGTTCCTAA 57.607 47.619 0.00 0.00 0.00 2.69
3020 3070 4.105217 TGATACATACTCCCTCCGTTCCTA 59.895 45.833 0.00 0.00 0.00 2.94
3021 3071 3.117246 TGATACATACTCCCTCCGTTCCT 60.117 47.826 0.00 0.00 0.00 3.36
3022 3072 3.005578 GTGATACATACTCCCTCCGTTCC 59.994 52.174 0.00 0.00 0.00 3.62
3023 3073 3.890147 AGTGATACATACTCCCTCCGTTC 59.110 47.826 0.00 0.00 0.00 3.95
3024 3074 3.637229 CAGTGATACATACTCCCTCCGTT 59.363 47.826 0.00 0.00 0.00 4.44
3025 3075 3.223435 CAGTGATACATACTCCCTCCGT 58.777 50.000 0.00 0.00 0.00 4.69
3026 3076 3.223435 ACAGTGATACATACTCCCTCCG 58.777 50.000 0.00 0.00 0.00 4.63
3027 3077 4.202264 CCAACAGTGATACATACTCCCTCC 60.202 50.000 0.00 0.00 0.00 4.30
3028 3078 4.649674 TCCAACAGTGATACATACTCCCTC 59.350 45.833 0.00 0.00 0.00 4.30
3029 3079 4.620723 TCCAACAGTGATACATACTCCCT 58.379 43.478 0.00 0.00 0.00 4.20
3030 3080 5.353394 TTCCAACAGTGATACATACTCCC 57.647 43.478 0.00 0.00 0.00 4.30
3031 3081 7.865706 AATTTCCAACAGTGATACATACTCC 57.134 36.000 0.00 0.00 0.00 3.85
3033 3083 9.959721 AGTAAATTTCCAACAGTGATACATACT 57.040 29.630 0.00 0.00 0.00 2.12
3203 3253 5.413523 ACCTAATCGGATTTTGTTGGTACAC 59.586 40.000 8.76 0.00 35.06 2.90
3312 3362 1.273048 TGGTCATTGATTGGCAGTTGC 59.727 47.619 0.00 0.00 41.14 4.17
3682 3733 6.439058 CCCATAAAAGGTATTCAGAAACCCAA 59.561 38.462 9.62 0.00 36.34 4.12
3897 3964 4.648762 AGCCTATCCCATATCTCTTCATCG 59.351 45.833 0.00 0.00 0.00 3.84
3960 4027 2.542824 CCAACACAGGCCAAAAGTTACG 60.543 50.000 5.01 0.00 0.00 3.18
3991 4059 6.859508 GGTTTAGTTGATTCGGTTAAAAGGTG 59.140 38.462 0.00 0.00 0.00 4.00
4470 4547 9.719355 TTCAGCTTCTTAACATGTTTGACTATA 57.281 29.630 17.78 0.00 0.00 1.31
4522 4599 2.762327 CTGCAAATCAAAGGCCCACTAT 59.238 45.455 0.00 0.00 0.00 2.12
4539 4618 2.177394 TGCGTTTCTACAATCCTGCA 57.823 45.000 0.00 0.00 0.00 4.41
4602 4682 5.009610 TCAAACAAACTCAAATCCTGTAGGC 59.990 40.000 0.00 0.00 34.44 3.93
4658 4761 2.787994 AGCATCCACTCCAACTTCTTG 58.212 47.619 0.00 0.00 0.00 3.02
4659 4762 3.840666 TCTAGCATCCACTCCAACTTCTT 59.159 43.478 0.00 0.00 0.00 2.52
4660 4763 3.445008 TCTAGCATCCACTCCAACTTCT 58.555 45.455 0.00 0.00 0.00 2.85
4661 4764 3.895232 TCTAGCATCCACTCCAACTTC 57.105 47.619 0.00 0.00 0.00 3.01
4662 4765 4.851639 AATCTAGCATCCACTCCAACTT 57.148 40.909 0.00 0.00 0.00 2.66
4663 4766 4.384647 GGAAATCTAGCATCCACTCCAACT 60.385 45.833 4.08 0.00 33.30 3.16
4823 5012 7.539034 AACTTAGCCAATTCAAATGTTAGGT 57.461 32.000 0.00 0.00 0.00 3.08
4838 5027 7.230510 CCTGTGGCAAATAATATAACTTAGCCA 59.769 37.037 0.00 0.00 46.31 4.75
5087 5276 4.146058 CACACTCTGTGCCTGCAA 57.854 55.556 0.00 0.00 41.89 4.08
5313 5502 1.334869 AGAAGTTGAAAGCACGGCAAG 59.665 47.619 0.00 0.00 0.00 4.01
5318 5507 3.673746 TGAACAGAAGTTGAAAGCACG 57.326 42.857 0.00 0.00 38.30 5.34
5431 5620 9.906660 CTACAAGCTTAACACAAAAATGGAATA 57.093 29.630 0.00 0.00 0.00 1.75
5469 5658 8.052748 ACTTAATAATCATACTGGCCTTCACAA 58.947 33.333 3.32 0.00 0.00 3.33
5649 5838 6.042437 ACAAGCCTTTCAAAGAATCTCCAAAT 59.958 34.615 0.00 0.00 0.00 2.32
5792 5981 5.131142 GGAGGAGGGACTGAGATAATGAAAA 59.869 44.000 0.00 0.00 41.55 2.29
5793 5982 4.656112 GGAGGAGGGACTGAGATAATGAAA 59.344 45.833 0.00 0.00 41.55 2.69
5801 5990 1.006519 CAGAAGGAGGAGGGACTGAGA 59.993 57.143 0.00 0.00 41.55 3.27
5809 5998 5.586643 GCTTTTAATGTACAGAAGGAGGAGG 59.413 44.000 0.33 0.00 0.00 4.30
5810 5999 6.314896 CAGCTTTTAATGTACAGAAGGAGGAG 59.685 42.308 0.33 0.00 0.00 3.69
5811 6000 6.173339 CAGCTTTTAATGTACAGAAGGAGGA 58.827 40.000 0.33 0.00 0.00 3.71
5899 6088 6.682423 TCTTCGTCAATAGACCACGTAATA 57.318 37.500 0.00 0.00 41.87 0.98
6055 6244 3.244526 TGCCATCTGTAGACAAGCAGAAA 60.245 43.478 0.00 0.00 43.79 2.52
6056 6245 2.302733 TGCCATCTGTAGACAAGCAGAA 59.697 45.455 0.00 0.00 43.79 3.02
6168 6357 0.171007 AGAAAAATGATGTGCCGCCG 59.829 50.000 0.00 0.00 0.00 6.46
6172 6361 7.656707 ACAACAATAAGAAAAATGATGTGCC 57.343 32.000 0.00 0.00 29.22 5.01
6310 6499 6.825610 AGTGATGATTATCTTGTCTTCTCCC 58.174 40.000 0.00 0.00 34.31 4.30
6436 6625 6.780706 AAAACGCTCTTATATTATGGGACG 57.219 37.500 0.00 0.00 0.00 4.79
6439 6628 7.855904 GTGTCAAAAACGCTCTTATATTATGGG 59.144 37.037 0.00 0.00 35.42 4.00
6440 6629 8.612619 AGTGTCAAAAACGCTCTTATATTATGG 58.387 33.333 0.00 0.00 45.69 2.74
6647 6881 5.552178 ACTTCAACTGTCCTGGAAGTATTC 58.448 41.667 0.00 0.00 45.81 1.75
6869 7105 1.403323 GCTTTGCTCTCCCAATGCTAC 59.597 52.381 5.77 0.00 40.60 3.58
6981 7222 8.848474 TCTAAGACAAGTAATTTGGGAAAGAG 57.152 34.615 0.00 0.00 41.25 2.85
6985 7226 9.807921 AGAAATCTAAGACAAGTAATTTGGGAA 57.192 29.630 0.00 0.00 41.25 3.97
7090 7336 8.155821 TCTAGACATTCTTAAGATGTACTCCG 57.844 38.462 5.89 7.60 0.00 4.63
7166 7459 4.454678 TCTCCCAGTCATATTGCAATGTC 58.545 43.478 22.27 5.72 0.00 3.06
7167 7460 4.164796 TCTCTCCCAGTCATATTGCAATGT 59.835 41.667 22.27 12.90 0.00 2.71
7397 7704 7.014230 AGCACGGGCATATTAGTTAATGAAAAT 59.986 33.333 14.57 0.00 44.61 1.82
7481 7788 8.992073 GTTGGACATTTGCAGAAAAATAAGAAT 58.008 29.630 0.00 0.00 0.00 2.40
7491 7798 3.565307 AGAAGGTTGGACATTTGCAGAA 58.435 40.909 0.00 0.00 0.00 3.02
7554 7861 3.486263 CGACAAATCGGGCAGGAC 58.514 61.111 0.00 0.00 44.99 3.85
7649 7956 3.433306 TCCTAGGGTCAAAACATGTGG 57.567 47.619 9.46 0.00 0.00 4.17
7650 7957 6.414732 TCTAATCCTAGGGTCAAAACATGTG 58.585 40.000 9.46 0.00 0.00 3.21
7657 7964 6.884472 TGATGTTCTAATCCTAGGGTCAAA 57.116 37.500 9.46 0.00 0.00 2.69
7712 8019 5.819901 AGAATAGTTTGTCTTCCTATGCTGC 59.180 40.000 0.00 0.00 27.97 5.25
7753 8060 5.821097 AGCCCAAACTTATTCTAGCTTTCT 58.179 37.500 0.00 0.00 0.00 2.52
7771 8078 0.547471 TGTCCTCCATTCTGAGCCCA 60.547 55.000 0.00 0.00 0.00 5.36
7772 8079 0.842635 ATGTCCTCCATTCTGAGCCC 59.157 55.000 0.00 0.00 0.00 5.19
7905 8218 3.888930 GGAAATTCAGTGGTTCAAGTGGA 59.111 43.478 0.00 0.00 0.00 4.02
7940 8253 2.633657 CAGGTGCAACACGTCTGC 59.366 61.111 3.64 11.41 39.98 4.26
7975 8288 6.770785 AGCTGTTAAGATGTTAAGAACCACAA 59.229 34.615 0.00 0.00 0.00 3.33
7976 8289 6.204688 CAGCTGTTAAGATGTTAAGAACCACA 59.795 38.462 5.25 0.00 35.02 4.17
7989 8311 2.237392 GACCCCTGTCAGCTGTTAAGAT 59.763 50.000 14.67 0.00 41.37 2.40
8010 8332 2.097466 ACAGTTCAAACAACCTGAAGCG 59.903 45.455 0.00 0.00 33.56 4.68
8011 8333 3.782889 ACAGTTCAAACAACCTGAAGC 57.217 42.857 0.00 0.00 33.56 3.86
8047 8371 8.462811 TGAACTGATGAAGTGAGAGTTATAGTC 58.537 37.037 0.00 0.00 39.81 2.59
8149 8503 6.350629 AGGCAGAATTAGAAATGCTTGTTT 57.649 33.333 0.00 0.00 38.71 2.83
8161 8515 5.360591 CACCAAGGTACTAGGCAGAATTAG 58.639 45.833 0.00 0.00 38.49 1.73
8162 8516 4.383770 GCACCAAGGTACTAGGCAGAATTA 60.384 45.833 0.00 0.00 38.49 1.40
8163 8517 3.622455 GCACCAAGGTACTAGGCAGAATT 60.622 47.826 0.00 0.00 38.49 2.17
8164 8518 2.092914 GCACCAAGGTACTAGGCAGAAT 60.093 50.000 0.00 0.00 38.49 2.40
8165 8519 1.278127 GCACCAAGGTACTAGGCAGAA 59.722 52.381 0.00 0.00 38.49 3.02
8166 8520 0.902531 GCACCAAGGTACTAGGCAGA 59.097 55.000 0.00 0.00 38.49 4.26
8327 8698 2.959484 CGAGCAGGAGAAAGGCCCA 61.959 63.158 0.00 0.00 0.00 5.36
8342 8723 3.181967 CTTTCCGGCGAGCACGAG 61.182 66.667 9.30 0.00 42.66 4.18
8343 8724 3.676605 TCTTTCCGGCGAGCACGA 61.677 61.111 9.30 0.00 42.66 4.35
8387 8768 1.069049 GGCCACAAATGTTGACTTGCT 59.931 47.619 0.00 0.00 0.00 3.91
8477 8862 1.203287 CTAGCAAAGCAAAGGGAAGCC 59.797 52.381 0.00 0.00 0.00 4.35
8478 8863 1.203287 CCTAGCAAAGCAAAGGGAAGC 59.797 52.381 0.00 0.00 32.61 3.86
8482 8867 0.244721 GCACCTAGCAAAGCAAAGGG 59.755 55.000 12.92 5.48 44.79 3.95
8483 8868 3.800628 GCACCTAGCAAAGCAAAGG 57.199 52.632 8.36 8.36 44.79 3.11
8595 8992 1.588674 CCTACACAAGCAACGACCAA 58.411 50.000 0.00 0.00 0.00 3.67
8614 9011 2.260743 GAGGCAGCAAAAGCAGGC 59.739 61.111 0.00 0.00 0.00 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.