Multiple sequence alignment - TraesCS5D01G212800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G212800 chr5D 100.000 4602 0 0 1 4602 321904645 321900044 0.000000e+00 8499
1 TraesCS5D01G212800 chr5D 91.667 444 36 1 1 443 486863131 486863574 8.460000e-172 614
2 TraesCS5D01G212800 chr5D 77.452 785 143 24 1090 1854 524922282 524923052 5.470000e-119 438
3 TraesCS5D01G212800 chr5B 93.506 2048 107 17 533 2569 373047102 373045070 0.000000e+00 3022
4 TraesCS5D01G212800 chr5B 91.388 1405 72 21 3226 4602 373044546 373043163 0.000000e+00 1879
5 TraesCS5D01G212800 chr5B 78.299 788 128 28 1090 1854 659415537 659416304 6.970000e-128 468
6 TraesCS5D01G212800 chr5B 87.405 262 30 2 2731 2989 373045071 373044810 9.680000e-77 298
7 TraesCS5D01G212800 chr5A 94.510 1949 90 11 629 2567 417051993 417050052 0.000000e+00 2990
8 TraesCS5D01G212800 chr5A 87.581 1385 103 34 3239 4602 417045917 417044581 0.000000e+00 1541
9 TraesCS5D01G212800 chr5A 76.529 801 147 28 1076 1854 651447047 651447828 2.580000e-107 399
10 TraesCS5D01G212800 chr5A 97.674 172 4 0 2567 2738 651496987 651496816 3.480000e-76 296
11 TraesCS5D01G212800 chr5A 87.747 253 26 3 2732 2981 417050050 417049800 1.620000e-74 291
12 TraesCS5D01G212800 chr5A 88.889 90 8 2 526 614 417053142 417053054 4.870000e-20 110
13 TraesCS5D01G212800 chr3B 93.889 1980 83 10 599 2566 585732067 585730114 0.000000e+00 2952
14 TraesCS5D01G212800 chr3B 93.267 1099 66 7 2729 3824 585730111 585729018 0.000000e+00 1613
15 TraesCS5D01G212800 chr3B 85.049 408 23 17 4199 4602 585728990 585728617 9.340000e-102 381
16 TraesCS5D01G212800 chr4A 85.054 736 50 24 3686 4394 374661163 374661865 0.000000e+00 695
17 TraesCS5D01G212800 chr7A 85.294 714 50 24 3686 4378 3419067 3419746 0.000000e+00 686
18 TraesCS5D01G212800 chr7A 92.551 443 32 1 2 443 728323253 728323695 6.500000e-178 634
19 TraesCS5D01G212800 chr3D 92.377 446 29 4 1 443 565711070 565711513 8.400000e-177 630
20 TraesCS5D01G212800 chr1B 93.039 431 28 2 14 443 515052138 515051709 3.020000e-176 628
21 TraesCS5D01G212800 chr3A 92.117 444 33 2 1 443 729703184 729702742 3.910000e-175 625
22 TraesCS5D01G212800 chr2D 92.099 443 33 2 2 443 373748030 373748471 1.410000e-174 623
23 TraesCS5D01G212800 chr2D 91.892 444 35 1 1 443 401291394 401290951 1.820000e-173 619
24 TraesCS5D01G212800 chr2D 98.795 166 2 0 2567 2732 516708311 516708476 3.480000e-76 296
25 TraesCS5D01G212800 chr2D 97.110 173 4 1 2564 2736 24312361 24312190 1.620000e-74 291
26 TraesCS5D01G212800 chr2D 97.619 168 4 0 2568 2735 161907016 161906849 5.830000e-74 289
27 TraesCS5D01G212800 chr2A 91.892 444 35 1 1 443 338516479 338516922 1.820000e-173 619
28 TraesCS5D01G212800 chr2A 93.651 189 9 2 2544 2732 761249220 761249035 3.510000e-71 279
29 TraesCS5D01G212800 chr1A 91.667 444 35 2 2 443 372466707 372467150 8.460000e-172 614
30 TraesCS5D01G212800 chrUn 83.910 578 39 18 3686 4241 82536792 82536247 1.910000e-138 503
31 TraesCS5D01G212800 chr7B 97.126 174 5 0 2568 2741 92046022 92045849 1.250000e-75 294
32 TraesCS5D01G212800 chr4B 98.225 169 2 1 2565 2733 585609291 585609124 1.250000e-75 294
33 TraesCS5D01G212800 chr6A 97.076 171 5 0 2567 2737 24071895 24072065 5.830000e-74 289
34 TraesCS5D01G212800 chr6A 96.045 177 6 1 2557 2732 222571420 222571244 2.100000e-73 287


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G212800 chr5D 321900044 321904645 4601 True 8499.000000 8499 100.000000 1 4602 1 chr5D.!!$R1 4601
1 TraesCS5D01G212800 chr5D 524922282 524923052 770 False 438.000000 438 77.452000 1090 1854 1 chr5D.!!$F2 764
2 TraesCS5D01G212800 chr5B 373043163 373047102 3939 True 1733.000000 3022 90.766333 533 4602 3 chr5B.!!$R1 4069
3 TraesCS5D01G212800 chr5B 659415537 659416304 767 False 468.000000 468 78.299000 1090 1854 1 chr5B.!!$F1 764
4 TraesCS5D01G212800 chr5A 417044581 417053142 8561 True 1233.000000 2990 89.681750 526 4602 4 chr5A.!!$R2 4076
5 TraesCS5D01G212800 chr5A 651447047 651447828 781 False 399.000000 399 76.529000 1076 1854 1 chr5A.!!$F1 778
6 TraesCS5D01G212800 chr3B 585728617 585732067 3450 True 1648.666667 2952 90.735000 599 4602 3 chr3B.!!$R1 4003
7 TraesCS5D01G212800 chr4A 374661163 374661865 702 False 695.000000 695 85.054000 3686 4394 1 chr4A.!!$F1 708
8 TraesCS5D01G212800 chr7A 3419067 3419746 679 False 686.000000 686 85.294000 3686 4378 1 chr7A.!!$F1 692
9 TraesCS5D01G212800 chrUn 82536247 82536792 545 True 503.000000 503 83.910000 3686 4241 1 chrUn.!!$R1 555

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
329 330 0.035152 ATGGCCGACAAAGAGCATCA 60.035 50.0 0.00 0.0 37.82 3.07 F
330 331 0.035152 TGGCCGACAAAGAGCATCAT 60.035 50.0 0.00 0.0 37.82 2.45 F
1702 2775 0.106708 TGCAGTCAGACAACCAGGAC 59.893 55.0 2.66 0.0 0.00 3.85 F
2313 3398 1.423395 CCTGCTCAAGAAGACACGTC 58.577 55.0 0.00 0.0 0.00 4.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1152 2207 0.324738 TCCAGGAGACGATCTTGCCT 60.325 55.000 0.00 0.0 33.74 4.75 R
2309 3394 0.601311 GTTGGAGCTGCTTCAGACGT 60.601 55.000 11.06 0.0 32.44 4.34 R
2762 3849 1.228367 CATGATAGCCCCCTGCACC 60.228 63.158 0.00 0.0 44.83 5.01 R
4061 8965 0.190815 ATGCCCCCAAACTGAAACCT 59.809 50.000 0.00 0.0 0.00 3.50 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.262423 AAAAGGTGCGAAGAGAGCTT 57.738 45.000 0.00 0.00 36.96 3.74
20 21 2.262423 AAAGGTGCGAAGAGAGCTTT 57.738 45.000 0.00 0.00 35.57 3.51
21 22 2.262423 AAGGTGCGAAGAGAGCTTTT 57.738 45.000 0.00 0.00 33.61 2.27
22 23 1.517242 AGGTGCGAAGAGAGCTTTTG 58.483 50.000 0.00 0.00 33.61 2.44
23 24 1.202698 AGGTGCGAAGAGAGCTTTTGT 60.203 47.619 0.00 0.00 33.61 2.83
24 25 1.069636 GGTGCGAAGAGAGCTTTTGTG 60.070 52.381 0.00 0.00 33.61 3.33
25 26 1.867233 GTGCGAAGAGAGCTTTTGTGA 59.133 47.619 0.00 0.00 33.61 3.58
26 27 2.481952 GTGCGAAGAGAGCTTTTGTGAT 59.518 45.455 0.00 0.00 33.61 3.06
27 28 3.058639 GTGCGAAGAGAGCTTTTGTGATT 60.059 43.478 0.00 0.00 33.61 2.57
28 29 3.565482 TGCGAAGAGAGCTTTTGTGATTT 59.435 39.130 0.00 0.00 33.61 2.17
29 30 4.036734 TGCGAAGAGAGCTTTTGTGATTTT 59.963 37.500 0.00 0.00 33.61 1.82
30 31 4.380974 GCGAAGAGAGCTTTTGTGATTTTG 59.619 41.667 0.00 0.00 33.61 2.44
31 32 4.380974 CGAAGAGAGCTTTTGTGATTTTGC 59.619 41.667 0.00 0.00 33.61 3.68
32 33 4.924305 AGAGAGCTTTTGTGATTTTGCA 57.076 36.364 0.00 0.00 0.00 4.08
33 34 5.266733 AGAGAGCTTTTGTGATTTTGCAA 57.733 34.783 0.00 0.00 0.00 4.08
34 35 5.287226 AGAGAGCTTTTGTGATTTTGCAAG 58.713 37.500 0.00 0.00 0.00 4.01
35 36 3.805971 AGAGCTTTTGTGATTTTGCAAGC 59.194 39.130 0.00 0.00 37.50 4.01
36 37 2.874086 AGCTTTTGTGATTTTGCAAGCC 59.126 40.909 0.00 0.00 37.88 4.35
37 38 2.031769 GCTTTTGTGATTTTGCAAGCCC 60.032 45.455 0.00 0.00 32.20 5.19
38 39 2.996249 TTTGTGATTTTGCAAGCCCA 57.004 40.000 0.00 0.00 0.00 5.36
39 40 2.996249 TTGTGATTTTGCAAGCCCAA 57.004 40.000 0.00 0.00 0.00 4.12
40 41 3.488778 TTGTGATTTTGCAAGCCCAAT 57.511 38.095 0.00 0.00 0.00 3.16
41 42 3.488778 TGTGATTTTGCAAGCCCAATT 57.511 38.095 0.00 0.00 0.00 2.32
42 43 3.818180 TGTGATTTTGCAAGCCCAATTT 58.182 36.364 0.00 0.00 0.00 1.82
43 44 3.564644 TGTGATTTTGCAAGCCCAATTTG 59.435 39.130 0.00 0.00 0.00 2.32
48 49 3.252979 GCAAGCCCAATTTGCCATT 57.747 47.368 0.00 0.00 43.88 3.16
49 50 0.806241 GCAAGCCCAATTTGCCATTG 59.194 50.000 0.00 0.00 43.88 2.82
50 51 1.883209 GCAAGCCCAATTTGCCATTGT 60.883 47.619 5.30 0.00 43.88 2.71
51 52 1.807742 CAAGCCCAATTTGCCATTGTG 59.192 47.619 5.30 0.00 0.00 3.33
52 53 1.350071 AGCCCAATTTGCCATTGTGA 58.650 45.000 5.30 0.00 0.00 3.58
53 54 1.276989 AGCCCAATTTGCCATTGTGAG 59.723 47.619 5.30 0.00 0.00 3.51
54 55 1.275856 GCCCAATTTGCCATTGTGAGA 59.724 47.619 5.30 0.00 0.00 3.27
55 56 2.675889 GCCCAATTTGCCATTGTGAGAG 60.676 50.000 5.30 0.00 0.00 3.20
56 57 2.093869 CCCAATTTGCCATTGTGAGAGG 60.094 50.000 5.30 0.00 0.00 3.69
57 58 2.827322 CCAATTTGCCATTGTGAGAGGA 59.173 45.455 5.30 0.00 0.00 3.71
58 59 3.367703 CCAATTTGCCATTGTGAGAGGAC 60.368 47.826 5.30 0.00 0.00 3.85
59 60 1.909700 TTTGCCATTGTGAGAGGACC 58.090 50.000 0.00 0.00 0.00 4.46
60 61 0.321564 TTGCCATTGTGAGAGGACCG 60.322 55.000 0.00 0.00 0.00 4.79
61 62 1.450312 GCCATTGTGAGAGGACCGG 60.450 63.158 0.00 0.00 0.00 5.28
62 63 1.450312 CCATTGTGAGAGGACCGGC 60.450 63.158 0.00 0.00 0.00 6.13
63 64 1.599047 CATTGTGAGAGGACCGGCT 59.401 57.895 0.00 0.00 0.00 5.52
64 65 0.824109 CATTGTGAGAGGACCGGCTA 59.176 55.000 0.00 0.00 0.00 3.93
65 66 1.115467 ATTGTGAGAGGACCGGCTAG 58.885 55.000 0.00 0.00 0.00 3.42
66 67 0.039180 TTGTGAGAGGACCGGCTAGA 59.961 55.000 0.00 0.00 0.00 2.43
67 68 0.259065 TGTGAGAGGACCGGCTAGAT 59.741 55.000 0.00 0.00 0.00 1.98
68 69 1.342076 TGTGAGAGGACCGGCTAGATT 60.342 52.381 0.00 0.00 0.00 2.40
69 70 1.757699 GTGAGAGGACCGGCTAGATTT 59.242 52.381 0.00 0.00 0.00 2.17
70 71 2.168728 GTGAGAGGACCGGCTAGATTTT 59.831 50.000 0.00 0.00 0.00 1.82
71 72 2.168521 TGAGAGGACCGGCTAGATTTTG 59.831 50.000 0.00 0.00 0.00 2.44
72 73 1.486726 AGAGGACCGGCTAGATTTTGG 59.513 52.381 0.00 0.00 0.00 3.28
73 74 0.546598 AGGACCGGCTAGATTTTGGG 59.453 55.000 0.00 0.00 0.00 4.12
74 75 0.544697 GGACCGGCTAGATTTTGGGA 59.455 55.000 0.00 0.00 0.00 4.37
75 76 1.143073 GGACCGGCTAGATTTTGGGAT 59.857 52.381 0.00 0.00 0.00 3.85
76 77 2.495084 GACCGGCTAGATTTTGGGATC 58.505 52.381 0.00 0.00 0.00 3.36
77 78 1.843851 ACCGGCTAGATTTTGGGATCA 59.156 47.619 0.00 0.00 0.00 2.92
78 79 2.241176 ACCGGCTAGATTTTGGGATCAA 59.759 45.455 0.00 0.00 0.00 2.57
79 80 3.287222 CCGGCTAGATTTTGGGATCAAA 58.713 45.455 0.00 0.00 40.71 2.69
90 91 5.804944 TTTGGGATCAAAAGATGCTTTCA 57.195 34.783 0.00 0.00 39.64 2.69
91 92 6.363167 TTTGGGATCAAAAGATGCTTTCAT 57.637 33.333 0.00 0.00 39.64 2.57
92 93 7.479352 TTTGGGATCAAAAGATGCTTTCATA 57.521 32.000 0.00 0.00 39.64 2.15
93 94 6.455360 TGGGATCAAAAGATGCTTTCATAC 57.545 37.500 0.00 0.00 31.96 2.39
94 95 5.951148 TGGGATCAAAAGATGCTTTCATACA 59.049 36.000 0.00 0.00 31.96 2.29
95 96 6.608405 TGGGATCAAAAGATGCTTTCATACAT 59.392 34.615 0.00 0.00 31.96 2.29
96 97 7.144000 GGGATCAAAAGATGCTTTCATACATC 58.856 38.462 0.00 0.00 42.45 3.06
97 98 7.201848 GGGATCAAAAGATGCTTTCATACATCA 60.202 37.037 5.84 0.00 44.16 3.07
98 99 8.358148 GGATCAAAAGATGCTTTCATACATCAT 58.642 33.333 5.84 0.00 44.16 2.45
99 100 9.395707 GATCAAAAGATGCTTTCATACATCATC 57.604 33.333 5.84 0.00 44.16 2.92
100 101 7.709947 TCAAAAGATGCTTTCATACATCATCC 58.290 34.615 5.84 0.00 44.16 3.51
101 102 7.339976 TCAAAAGATGCTTTCATACATCATCCA 59.660 33.333 5.84 0.00 44.16 3.41
102 103 6.630444 AAGATGCTTTCATACATCATCCAC 57.370 37.500 5.84 0.00 44.16 4.02
103 104 4.753610 AGATGCTTTCATACATCATCCACG 59.246 41.667 5.84 0.00 44.16 4.94
104 105 2.613595 TGCTTTCATACATCATCCACGC 59.386 45.455 0.00 0.00 0.00 5.34
105 106 2.874701 GCTTTCATACATCATCCACGCT 59.125 45.455 0.00 0.00 0.00 5.07
106 107 3.313526 GCTTTCATACATCATCCACGCTT 59.686 43.478 0.00 0.00 0.00 4.68
107 108 4.787563 GCTTTCATACATCATCCACGCTTG 60.788 45.833 0.00 0.00 0.00 4.01
108 109 3.541996 TCATACATCATCCACGCTTGT 57.458 42.857 0.00 0.00 0.00 3.16
109 110 3.197265 TCATACATCATCCACGCTTGTG 58.803 45.455 0.00 0.00 43.46 3.33
110 111 2.760634 TACATCATCCACGCTTGTGT 57.239 45.000 0.00 0.00 42.24 3.72
111 112 1.159285 ACATCATCCACGCTTGTGTG 58.841 50.000 7.28 7.28 42.24 3.82
112 113 1.270785 ACATCATCCACGCTTGTGTGA 60.271 47.619 14.93 1.22 42.55 3.58
113 114 2.011947 CATCATCCACGCTTGTGTGAT 58.988 47.619 14.93 3.36 42.55 3.06
114 115 1.725641 TCATCCACGCTTGTGTGATC 58.274 50.000 14.93 0.00 42.55 2.92
115 116 1.001860 TCATCCACGCTTGTGTGATCA 59.998 47.619 14.93 0.00 42.55 2.92
116 117 2.011947 CATCCACGCTTGTGTGATCAT 58.988 47.619 14.93 2.63 42.55 2.45
117 118 1.441738 TCCACGCTTGTGTGATCATG 58.558 50.000 14.93 0.00 42.55 3.07
118 119 0.179181 CCACGCTTGTGTGATCATGC 60.179 55.000 14.93 0.00 42.55 4.06
119 120 0.518195 CACGCTTGTGTGATCATGCA 59.482 50.000 8.46 0.00 42.55 3.96
120 121 0.518636 ACGCTTGTGTGATCATGCAC 59.481 50.000 9.04 9.04 38.03 4.57
121 122 0.518195 CGCTTGTGTGATCATGCACA 59.482 50.000 13.54 13.54 45.80 4.57
136 137 3.249986 TGCACAACATGATCATCGAGA 57.750 42.857 4.86 0.00 0.00 4.04
137 138 3.598299 TGCACAACATGATCATCGAGAA 58.402 40.909 4.86 0.00 0.00 2.87
138 139 4.193865 TGCACAACATGATCATCGAGAAT 58.806 39.130 4.86 0.00 0.00 2.40
139 140 5.358922 TGCACAACATGATCATCGAGAATA 58.641 37.500 4.86 0.00 0.00 1.75
140 141 5.816777 TGCACAACATGATCATCGAGAATAA 59.183 36.000 4.86 0.00 0.00 1.40
141 142 6.018507 TGCACAACATGATCATCGAGAATAAG 60.019 38.462 4.86 0.00 0.00 1.73
142 143 6.361114 CACAACATGATCATCGAGAATAAGC 58.639 40.000 4.86 0.00 0.00 3.09
143 144 5.176406 ACAACATGATCATCGAGAATAAGCG 59.824 40.000 4.86 0.00 0.00 4.68
144 145 4.876125 ACATGATCATCGAGAATAAGCGT 58.124 39.130 4.86 0.00 0.00 5.07
145 146 4.683320 ACATGATCATCGAGAATAAGCGTG 59.317 41.667 4.86 0.00 0.00 5.34
146 147 3.642705 TGATCATCGAGAATAAGCGTGG 58.357 45.455 0.00 0.00 0.00 4.94
147 148 1.852942 TCATCGAGAATAAGCGTGGC 58.147 50.000 0.00 0.00 0.00 5.01
148 149 0.861837 CATCGAGAATAAGCGTGGCC 59.138 55.000 0.00 0.00 0.00 5.36
149 150 0.464036 ATCGAGAATAAGCGTGGCCA 59.536 50.000 0.00 0.00 0.00 5.36
150 151 0.248012 TCGAGAATAAGCGTGGCCAA 59.752 50.000 7.24 0.00 0.00 4.52
151 152 0.652592 CGAGAATAAGCGTGGCCAAG 59.347 55.000 15.06 15.06 0.00 3.61
152 153 1.739035 CGAGAATAAGCGTGGCCAAGA 60.739 52.381 23.82 1.34 0.00 3.02
153 154 2.565841 GAGAATAAGCGTGGCCAAGAT 58.434 47.619 23.82 14.35 0.00 2.40
154 155 2.945668 GAGAATAAGCGTGGCCAAGATT 59.054 45.455 24.99 24.99 0.00 2.40
155 156 3.356290 AGAATAAGCGTGGCCAAGATTT 58.644 40.909 26.63 18.38 0.00 2.17
156 157 4.523083 AGAATAAGCGTGGCCAAGATTTA 58.477 39.130 26.63 19.78 0.00 1.40
157 158 4.576463 AGAATAAGCGTGGCCAAGATTTAG 59.424 41.667 26.63 4.62 0.00 1.85
158 159 2.489938 AAGCGTGGCCAAGATTTAGA 57.510 45.000 23.82 0.00 0.00 2.10
159 160 1.739067 AGCGTGGCCAAGATTTAGAC 58.261 50.000 23.82 2.32 0.00 2.59
160 161 1.279271 AGCGTGGCCAAGATTTAGACT 59.721 47.619 23.82 4.85 0.00 3.24
161 162 2.500098 AGCGTGGCCAAGATTTAGACTA 59.500 45.455 23.82 0.00 0.00 2.59
162 163 2.608090 GCGTGGCCAAGATTTAGACTAC 59.392 50.000 23.82 0.00 0.00 2.73
163 164 3.679083 GCGTGGCCAAGATTTAGACTACT 60.679 47.826 23.82 0.00 0.00 2.57
164 165 4.113354 CGTGGCCAAGATTTAGACTACTC 58.887 47.826 14.14 0.00 0.00 2.59
165 166 4.142138 CGTGGCCAAGATTTAGACTACTCT 60.142 45.833 14.14 0.00 0.00 3.24
166 167 5.353111 GTGGCCAAGATTTAGACTACTCTC 58.647 45.833 7.24 0.00 0.00 3.20
167 168 5.023452 TGGCCAAGATTTAGACTACTCTCA 58.977 41.667 0.61 0.00 0.00 3.27
168 169 5.127845 TGGCCAAGATTTAGACTACTCTCAG 59.872 44.000 0.61 0.00 0.00 3.35
169 170 5.128008 GGCCAAGATTTAGACTACTCTCAGT 59.872 44.000 0.00 0.00 0.00 3.41
170 171 6.321690 GGCCAAGATTTAGACTACTCTCAGTA 59.678 42.308 0.00 0.00 0.00 2.74
171 172 7.014808 GGCCAAGATTTAGACTACTCTCAGTAT 59.985 40.741 0.00 0.00 29.08 2.12
172 173 7.865385 GCCAAGATTTAGACTACTCTCAGTATG 59.135 40.741 0.00 0.00 29.08 2.39
186 187 4.662468 TCAGTATGAGCTCTTGGACATC 57.338 45.455 16.19 0.00 42.56 3.06
187 188 4.285020 TCAGTATGAGCTCTTGGACATCT 58.715 43.478 16.19 0.00 42.56 2.90
188 189 4.340666 TCAGTATGAGCTCTTGGACATCTC 59.659 45.833 16.19 0.00 42.56 2.75
189 190 2.886862 ATGAGCTCTTGGACATCTCG 57.113 50.000 16.19 0.00 0.00 4.04
190 191 1.550327 TGAGCTCTTGGACATCTCGT 58.450 50.000 16.19 0.00 0.00 4.18
191 192 1.203287 TGAGCTCTTGGACATCTCGTG 59.797 52.381 16.19 0.00 0.00 4.35
192 193 0.108424 AGCTCTTGGACATCTCGTGC 60.108 55.000 0.00 0.00 36.27 5.34
193 194 1.416813 GCTCTTGGACATCTCGTGCG 61.417 60.000 0.00 0.00 39.19 5.34
194 195 0.171231 CTCTTGGACATCTCGTGCGA 59.829 55.000 0.00 0.00 39.19 5.10
195 196 0.171231 TCTTGGACATCTCGTGCGAG 59.829 55.000 14.69 14.69 46.34 5.03
196 197 0.109086 CTTGGACATCTCGTGCGAGT 60.109 55.000 19.20 3.35 41.43 4.18
197 198 0.388520 TTGGACATCTCGTGCGAGTG 60.389 55.000 19.20 17.61 42.49 3.51
198 199 2.161486 GGACATCTCGTGCGAGTGC 61.161 63.158 19.20 12.57 42.49 4.40
231 232 2.419620 GGGTGGCCCGTTTTGTTG 59.580 61.111 0.00 0.00 32.13 3.33
232 233 2.279851 GGTGGCCCGTTTTGTTGC 60.280 61.111 0.00 0.00 0.00 4.17
233 234 2.279851 GTGGCCCGTTTTGTTGCC 60.280 61.111 0.00 0.00 44.27 4.52
234 235 2.443016 TGGCCCGTTTTGTTGCCT 60.443 55.556 0.00 0.00 44.32 4.75
235 236 2.338620 GGCCCGTTTTGTTGCCTC 59.661 61.111 0.00 0.00 40.77 4.70
236 237 2.338620 GCCCGTTTTGTTGCCTCC 59.661 61.111 0.00 0.00 0.00 4.30
237 238 2.200337 GCCCGTTTTGTTGCCTCCT 61.200 57.895 0.00 0.00 0.00 3.69
238 239 0.891904 GCCCGTTTTGTTGCCTCCTA 60.892 55.000 0.00 0.00 0.00 2.94
239 240 1.834188 CCCGTTTTGTTGCCTCCTAT 58.166 50.000 0.00 0.00 0.00 2.57
240 241 1.743394 CCCGTTTTGTTGCCTCCTATC 59.257 52.381 0.00 0.00 0.00 2.08
241 242 2.432444 CCGTTTTGTTGCCTCCTATCA 58.568 47.619 0.00 0.00 0.00 2.15
242 243 3.016736 CCGTTTTGTTGCCTCCTATCAT 58.983 45.455 0.00 0.00 0.00 2.45
243 244 3.181497 CCGTTTTGTTGCCTCCTATCATG 60.181 47.826 0.00 0.00 0.00 3.07
244 245 3.731867 CGTTTTGTTGCCTCCTATCATGC 60.732 47.826 0.00 0.00 0.00 4.06
245 246 2.057137 TTGTTGCCTCCTATCATGCC 57.943 50.000 0.00 0.00 0.00 4.40
246 247 0.918258 TGTTGCCTCCTATCATGCCA 59.082 50.000 0.00 0.00 0.00 4.92
247 248 1.496001 TGTTGCCTCCTATCATGCCAT 59.504 47.619 0.00 0.00 0.00 4.40
248 249 2.091720 TGTTGCCTCCTATCATGCCATT 60.092 45.455 0.00 0.00 0.00 3.16
249 250 2.555757 GTTGCCTCCTATCATGCCATTC 59.444 50.000 0.00 0.00 0.00 2.67
250 251 1.271001 TGCCTCCTATCATGCCATTCG 60.271 52.381 0.00 0.00 0.00 3.34
251 252 1.002430 GCCTCCTATCATGCCATTCGA 59.998 52.381 0.00 0.00 0.00 3.71
252 253 2.693069 CCTCCTATCATGCCATTCGAC 58.307 52.381 0.00 0.00 0.00 4.20
253 254 2.332104 CTCCTATCATGCCATTCGACG 58.668 52.381 0.00 0.00 0.00 5.12
254 255 1.686587 TCCTATCATGCCATTCGACGT 59.313 47.619 0.00 0.00 0.00 4.34
255 256 1.794701 CCTATCATGCCATTCGACGTG 59.205 52.381 0.00 0.00 0.00 4.49
256 257 1.193203 CTATCATGCCATTCGACGTGC 59.807 52.381 0.00 0.00 0.00 5.34
257 258 1.439353 ATCATGCCATTCGACGTGCC 61.439 55.000 0.00 0.00 0.00 5.01
258 259 3.195002 ATGCCATTCGACGTGCCG 61.195 61.111 0.00 0.00 0.00 5.69
259 260 3.657448 ATGCCATTCGACGTGCCGA 62.657 57.895 0.00 0.00 36.70 5.54
268 269 2.663478 GACGTGCCGAAACGCATGA 61.663 57.895 9.61 0.00 46.68 3.07
269 270 1.966493 GACGTGCCGAAACGCATGAT 61.966 55.000 9.61 0.00 46.68 2.45
270 271 1.580893 CGTGCCGAAACGCATGATG 60.581 57.895 0.00 0.00 46.68 3.07
271 272 1.793581 GTGCCGAAACGCATGATGA 59.206 52.632 0.00 0.00 41.70 2.92
272 273 0.378257 GTGCCGAAACGCATGATGAT 59.622 50.000 0.00 0.00 41.70 2.45
273 274 0.657312 TGCCGAAACGCATGATGATC 59.343 50.000 0.00 0.00 32.62 2.92
274 275 0.940126 GCCGAAACGCATGATGATCT 59.060 50.000 0.00 0.00 0.00 2.75
275 276 1.331756 GCCGAAACGCATGATGATCTT 59.668 47.619 0.00 0.00 0.00 2.40
276 277 2.600792 GCCGAAACGCATGATGATCTTC 60.601 50.000 0.00 1.67 0.00 2.87
277 278 2.609002 CCGAAACGCATGATGATCTTCA 59.391 45.455 13.17 13.17 0.00 3.02
278 279 3.302935 CCGAAACGCATGATGATCTTCAG 60.303 47.826 15.64 9.55 0.00 3.02
279 280 3.553105 CGAAACGCATGATGATCTTCAGA 59.447 43.478 15.64 0.00 0.00 3.27
280 281 4.033243 CGAAACGCATGATGATCTTCAGAA 59.967 41.667 15.64 0.00 0.00 3.02
281 282 5.481200 AAACGCATGATGATCTTCAGAAG 57.519 39.130 15.64 3.45 0.00 2.85
282 283 4.397481 ACGCATGATGATCTTCAGAAGA 57.603 40.909 15.44 15.44 42.69 2.87
283 284 4.763073 ACGCATGATGATCTTCAGAAGAA 58.237 39.130 17.00 1.87 41.63 2.52
284 285 5.366460 ACGCATGATGATCTTCAGAAGAAT 58.634 37.500 17.00 6.99 41.63 2.40
285 286 5.466058 ACGCATGATGATCTTCAGAAGAATC 59.534 40.000 17.00 15.50 41.63 2.52
286 287 5.465724 CGCATGATGATCTTCAGAAGAATCA 59.534 40.000 21.95 21.95 41.63 2.57
287 288 6.147985 CGCATGATGATCTTCAGAAGAATCAT 59.852 38.462 23.64 23.64 42.19 2.45
288 289 7.331193 CGCATGATGATCTTCAGAAGAATCATA 59.669 37.037 26.39 18.10 40.73 2.15
289 290 9.168451 GCATGATGATCTTCAGAAGAATCATAT 57.832 33.333 26.39 18.92 40.73 1.78
298 299 9.543783 TCTTCAGAAGAATCATATCAATGAGTG 57.456 33.333 10.68 0.00 40.37 3.51
299 300 8.672823 TTCAGAAGAATCATATCAATGAGTGG 57.327 34.615 0.00 0.00 45.17 4.00
300 301 7.799081 TCAGAAGAATCATATCAATGAGTGGT 58.201 34.615 0.00 0.00 45.17 4.16
301 302 7.713942 TCAGAAGAATCATATCAATGAGTGGTG 59.286 37.037 0.00 0.00 45.17 4.17
302 303 6.996879 AGAAGAATCATATCAATGAGTGGTGG 59.003 38.462 0.00 0.00 45.17 4.61
303 304 5.628130 AGAATCATATCAATGAGTGGTGGG 58.372 41.667 0.00 0.00 45.17 4.61
304 305 3.213206 TCATATCAATGAGTGGTGGGC 57.787 47.619 0.00 0.00 37.20 5.36
305 306 2.509131 TCATATCAATGAGTGGTGGGCA 59.491 45.455 0.00 0.00 37.20 5.36
306 307 3.138839 TCATATCAATGAGTGGTGGGCAT 59.861 43.478 0.00 0.00 37.20 4.40
307 308 1.771565 ATCAATGAGTGGTGGGCATG 58.228 50.000 0.00 0.00 0.00 4.06
308 309 0.697658 TCAATGAGTGGTGGGCATGA 59.302 50.000 0.00 0.00 0.00 3.07
309 310 1.075212 TCAATGAGTGGTGGGCATGAA 59.925 47.619 0.00 0.00 0.00 2.57
310 311 1.894466 CAATGAGTGGTGGGCATGAAA 59.106 47.619 0.00 0.00 0.00 2.69
311 312 2.498481 CAATGAGTGGTGGGCATGAAAT 59.502 45.455 0.00 0.00 0.00 2.17
313 314 0.819582 GAGTGGTGGGCATGAAATGG 59.180 55.000 0.00 0.00 46.86 3.16
321 322 3.810579 GCATGAAATGGCCGACAAA 57.189 47.368 0.00 0.00 46.86 2.83
322 323 1.632422 GCATGAAATGGCCGACAAAG 58.368 50.000 0.00 0.00 46.86 2.77
323 324 1.202114 GCATGAAATGGCCGACAAAGA 59.798 47.619 0.00 0.00 46.86 2.52
324 325 2.733227 GCATGAAATGGCCGACAAAGAG 60.733 50.000 0.00 0.00 46.86 2.85
325 326 0.881118 TGAAATGGCCGACAAAGAGC 59.119 50.000 0.00 0.00 0.00 4.09
326 327 0.881118 GAAATGGCCGACAAAGAGCA 59.119 50.000 0.00 0.00 0.00 4.26
327 328 1.474077 GAAATGGCCGACAAAGAGCAT 59.526 47.619 0.00 0.00 0.00 3.79
328 329 1.098050 AATGGCCGACAAAGAGCATC 58.902 50.000 0.00 0.00 0.00 3.91
329 330 0.035152 ATGGCCGACAAAGAGCATCA 60.035 50.000 0.00 0.00 37.82 3.07
330 331 0.035152 TGGCCGACAAAGAGCATCAT 60.035 50.000 0.00 0.00 37.82 2.45
331 332 0.379669 GGCCGACAAAGAGCATCATG 59.620 55.000 0.00 0.00 37.82 3.07
332 333 1.372582 GCCGACAAAGAGCATCATGA 58.627 50.000 0.00 0.00 37.82 3.07
333 334 1.945394 GCCGACAAAGAGCATCATGAT 59.055 47.619 1.18 1.18 37.82 2.45
334 335 2.357009 GCCGACAAAGAGCATCATGATT 59.643 45.455 5.16 0.00 37.82 2.57
335 336 3.181493 GCCGACAAAGAGCATCATGATTT 60.181 43.478 5.16 0.00 37.82 2.17
336 337 4.348656 CCGACAAAGAGCATCATGATTTG 58.651 43.478 5.16 10.98 37.82 2.32
337 338 4.142534 CCGACAAAGAGCATCATGATTTGT 60.143 41.667 19.33 19.33 44.39 2.83
338 339 5.065090 CCGACAAAGAGCATCATGATTTGTA 59.935 40.000 19.29 0.00 42.44 2.41
339 340 6.238566 CCGACAAAGAGCATCATGATTTGTAT 60.239 38.462 19.29 3.80 42.44 2.29
340 341 6.631636 CGACAAAGAGCATCATGATTTGTATG 59.368 38.462 19.29 13.31 42.44 2.39
341 342 7.400599 ACAAAGAGCATCATGATTTGTATGT 57.599 32.000 18.30 11.43 41.06 2.29
342 343 7.833786 ACAAAGAGCATCATGATTTGTATGTT 58.166 30.769 18.30 2.26 41.06 2.71
343 344 8.308931 ACAAAGAGCATCATGATTTGTATGTTT 58.691 29.630 18.30 7.42 41.06 2.83
344 345 8.592155 CAAAGAGCATCATGATTTGTATGTTTG 58.408 33.333 5.16 8.24 37.82 2.93
345 346 7.634671 AGAGCATCATGATTTGTATGTTTGA 57.365 32.000 5.16 0.00 37.82 2.69
346 347 8.234136 AGAGCATCATGATTTGTATGTTTGAT 57.766 30.769 5.16 0.00 37.82 2.57
347 348 8.135529 AGAGCATCATGATTTGTATGTTTGATG 58.864 33.333 5.16 0.00 41.03 3.07
350 351 8.061125 CATCATGATTTGTATGTTTGATGCTG 57.939 34.615 5.16 0.00 34.51 4.41
351 352 7.160547 TCATGATTTGTATGTTTGATGCTGT 57.839 32.000 0.00 0.00 0.00 4.40
352 353 8.278729 TCATGATTTGTATGTTTGATGCTGTA 57.721 30.769 0.00 0.00 0.00 2.74
353 354 8.905850 TCATGATTTGTATGTTTGATGCTGTAT 58.094 29.630 0.00 0.00 0.00 2.29
354 355 9.524106 CATGATTTGTATGTTTGATGCTGTATT 57.476 29.630 0.00 0.00 0.00 1.89
355 356 8.914328 TGATTTGTATGTTTGATGCTGTATTG 57.086 30.769 0.00 0.00 0.00 1.90
356 357 8.522003 TGATTTGTATGTTTGATGCTGTATTGT 58.478 29.630 0.00 0.00 0.00 2.71
357 358 9.357652 GATTTGTATGTTTGATGCTGTATTGTT 57.642 29.630 0.00 0.00 0.00 2.83
358 359 8.518151 TTTGTATGTTTGATGCTGTATTGTTG 57.482 30.769 0.00 0.00 0.00 3.33
359 360 7.446001 TGTATGTTTGATGCTGTATTGTTGA 57.554 32.000 0.00 0.00 0.00 3.18
360 361 7.880105 TGTATGTTTGATGCTGTATTGTTGAA 58.120 30.769 0.00 0.00 0.00 2.69
361 362 7.807433 TGTATGTTTGATGCTGTATTGTTGAAC 59.193 33.333 0.00 0.00 0.00 3.18
362 363 6.389830 TGTTTGATGCTGTATTGTTGAACT 57.610 33.333 0.00 0.00 0.00 3.01
363 364 7.503521 TGTTTGATGCTGTATTGTTGAACTA 57.496 32.000 0.00 0.00 0.00 2.24
364 365 8.109705 TGTTTGATGCTGTATTGTTGAACTAT 57.890 30.769 0.00 0.00 0.00 2.12
365 366 8.575589 TGTTTGATGCTGTATTGTTGAACTATT 58.424 29.630 0.00 0.00 0.00 1.73
366 367 9.410556 GTTTGATGCTGTATTGTTGAACTATTT 57.589 29.630 0.00 0.00 0.00 1.40
367 368 8.969121 TTGATGCTGTATTGTTGAACTATTTG 57.031 30.769 0.00 0.00 0.00 2.32
368 369 8.109705 TGATGCTGTATTGTTGAACTATTTGT 57.890 30.769 0.00 0.00 0.00 2.83
369 370 8.575589 TGATGCTGTATTGTTGAACTATTTGTT 58.424 29.630 0.00 0.00 42.38 2.83
385 386 9.769093 AACTATTTGTTCTATTGCACGATAAAC 57.231 29.630 0.00 0.00 32.63 2.01
386 387 9.162764 ACTATTTGTTCTATTGCACGATAAACT 57.837 29.630 0.00 0.00 0.00 2.66
392 393 9.811995 TGTTCTATTGCACGATAAACTATTAGT 57.188 29.630 0.00 0.00 0.00 2.24
449 450 9.842444 ATTGTTGATTTATTTTGTTTTTCGTCG 57.158 25.926 0.00 0.00 0.00 5.12
450 451 7.331055 TGTTGATTTATTTTGTTTTTCGTCGC 58.669 30.769 0.00 0.00 0.00 5.19
451 452 6.441099 TGATTTATTTTGTTTTTCGTCGCC 57.559 33.333 0.00 0.00 0.00 5.54
452 453 5.402867 TGATTTATTTTGTTTTTCGTCGCCC 59.597 36.000 0.00 0.00 0.00 6.13
453 454 2.873133 ATTTTGTTTTTCGTCGCCCA 57.127 40.000 0.00 0.00 0.00 5.36
454 455 2.649331 TTTTGTTTTTCGTCGCCCAA 57.351 40.000 0.00 0.00 0.00 4.12
455 456 2.649331 TTTGTTTTTCGTCGCCCAAA 57.351 40.000 0.00 0.00 0.00 3.28
456 457 2.649331 TTGTTTTTCGTCGCCCAAAA 57.351 40.000 0.00 0.00 0.00 2.44
457 458 2.649331 TGTTTTTCGTCGCCCAAAAA 57.351 40.000 0.42 0.42 0.00 1.94
458 459 2.260481 TGTTTTTCGTCGCCCAAAAAC 58.740 42.857 19.02 19.02 46.13 2.43
459 460 2.094649 TGTTTTTCGTCGCCCAAAAACT 60.095 40.909 23.02 0.00 46.11 2.66
460 461 2.924926 GTTTTTCGTCGCCCAAAAACTT 59.075 40.909 18.76 0.00 44.08 2.66
461 462 4.104066 GTTTTTCGTCGCCCAAAAACTTA 58.896 39.130 18.76 0.00 44.08 2.24
462 463 3.337301 TTTCGTCGCCCAAAAACTTAC 57.663 42.857 0.00 0.00 0.00 2.34
463 464 2.243602 TCGTCGCCCAAAAACTTACT 57.756 45.000 0.00 0.00 0.00 2.24
464 465 3.383620 TCGTCGCCCAAAAACTTACTA 57.616 42.857 0.00 0.00 0.00 1.82
465 466 3.929094 TCGTCGCCCAAAAACTTACTAT 58.071 40.909 0.00 0.00 0.00 2.12
466 467 3.928375 TCGTCGCCCAAAAACTTACTATC 59.072 43.478 0.00 0.00 0.00 2.08
467 468 3.680937 CGTCGCCCAAAAACTTACTATCA 59.319 43.478 0.00 0.00 0.00 2.15
468 469 4.152759 CGTCGCCCAAAAACTTACTATCAA 59.847 41.667 0.00 0.00 0.00 2.57
469 470 5.388111 GTCGCCCAAAAACTTACTATCAAC 58.612 41.667 0.00 0.00 0.00 3.18
470 471 5.049267 GTCGCCCAAAAACTTACTATCAACA 60.049 40.000 0.00 0.00 0.00 3.33
471 472 5.049267 TCGCCCAAAAACTTACTATCAACAC 60.049 40.000 0.00 0.00 0.00 3.32
472 473 5.151389 GCCCAAAAACTTACTATCAACACG 58.849 41.667 0.00 0.00 0.00 4.49
473 474 5.151389 CCCAAAAACTTACTATCAACACGC 58.849 41.667 0.00 0.00 0.00 5.34
474 475 5.048991 CCCAAAAACTTACTATCAACACGCT 60.049 40.000 0.00 0.00 0.00 5.07
475 476 6.148150 CCCAAAAACTTACTATCAACACGCTA 59.852 38.462 0.00 0.00 0.00 4.26
476 477 7.013529 CCAAAAACTTACTATCAACACGCTAC 58.986 38.462 0.00 0.00 0.00 3.58
477 478 7.307514 CCAAAAACTTACTATCAACACGCTACA 60.308 37.037 0.00 0.00 0.00 2.74
478 479 7.718272 AAAACTTACTATCAACACGCTACAA 57.282 32.000 0.00 0.00 0.00 2.41
479 480 7.718272 AAACTTACTATCAACACGCTACAAA 57.282 32.000 0.00 0.00 0.00 2.83
480 481 6.701432 ACTTACTATCAACACGCTACAAAC 57.299 37.500 0.00 0.00 0.00 2.93
481 482 5.344128 ACTTACTATCAACACGCTACAAACG 59.656 40.000 0.00 0.00 0.00 3.60
482 483 3.645884 ACTATCAACACGCTACAAACGT 58.354 40.909 0.00 0.00 46.42 3.99
483 484 4.053295 ACTATCAACACGCTACAAACGTT 58.947 39.130 0.00 0.00 42.96 3.99
484 485 3.955771 ATCAACACGCTACAAACGTTT 57.044 38.095 7.96 7.96 42.96 3.60
485 486 3.743567 TCAACACGCTACAAACGTTTT 57.256 38.095 11.66 5.92 42.96 2.43
486 487 4.080969 TCAACACGCTACAAACGTTTTT 57.919 36.364 11.66 7.99 42.96 1.94
502 503 2.965477 TTTTTAATACGCCGCGTGTT 57.035 40.000 27.33 27.33 43.00 3.32
503 504 2.229247 TTTTAATACGCCGCGTGTTG 57.771 45.000 30.68 0.00 40.91 3.33
504 505 0.179220 TTTAATACGCCGCGTGTTGC 60.179 50.000 30.68 0.00 40.91 4.17
505 506 1.968703 TTAATACGCCGCGTGTTGCC 61.969 55.000 30.68 0.00 40.91 4.52
514 515 4.326766 CGTGTTGCCCGGCTGTTG 62.327 66.667 11.61 0.00 0.00 3.33
515 516 2.904866 GTGTTGCCCGGCTGTTGA 60.905 61.111 11.61 0.00 0.00 3.18
516 517 2.124109 TGTTGCCCGGCTGTTGAA 60.124 55.556 11.61 0.00 0.00 2.69
517 518 2.192861 TGTTGCCCGGCTGTTGAAG 61.193 57.895 11.61 0.00 0.00 3.02
518 519 1.896660 GTTGCCCGGCTGTTGAAGA 60.897 57.895 11.61 0.00 0.00 2.87
519 520 1.074775 TTGCCCGGCTGTTGAAGAT 59.925 52.632 11.61 0.00 0.00 2.40
520 521 1.243342 TTGCCCGGCTGTTGAAGATG 61.243 55.000 11.61 0.00 0.00 2.90
521 522 3.056313 GCCCGGCTGTTGAAGATGC 62.056 63.158 0.71 0.00 0.00 3.91
522 523 1.377725 CCCGGCTGTTGAAGATGCT 60.378 57.895 0.00 0.00 0.00 3.79
523 524 1.372087 CCCGGCTGTTGAAGATGCTC 61.372 60.000 0.00 0.00 0.00 4.26
524 525 0.392193 CCGGCTGTTGAAGATGCTCT 60.392 55.000 0.00 0.00 0.00 4.09
571 573 1.461091 TAGACGACCATGCCCGATCC 61.461 60.000 11.12 1.97 0.00 3.36
574 576 2.280186 GACCATGCCCGATCCGAC 60.280 66.667 0.00 0.00 0.00 4.79
575 577 3.809374 GACCATGCCCGATCCGACC 62.809 68.421 0.00 0.00 0.00 4.79
704 1752 0.178990 GAAAGGGGTGCCACTTGTCT 60.179 55.000 6.48 0.00 0.00 3.41
705 1753 0.178990 AAAGGGGTGCCACTTGTCTC 60.179 55.000 6.48 0.00 0.00 3.36
736 1784 1.773054 CGAGATCACGATCGGACGGT 61.773 60.000 20.98 3.23 42.48 4.83
738 1786 1.944676 GATCACGATCGGACGGTGC 60.945 63.158 20.98 0.00 37.61 5.01
1152 2207 1.303091 TGAGCTCGACGATGACGGAA 61.303 55.000 9.64 0.00 44.46 4.30
1413 2468 2.436115 GGCGAAGAAACCCCTCCG 60.436 66.667 0.00 0.00 0.00 4.63
1649 2719 4.980592 TCCACCCCCTGCAGCTCA 62.981 66.667 8.66 0.00 0.00 4.26
1702 2775 0.106708 TGCAGTCAGACAACCAGGAC 59.893 55.000 2.66 0.00 0.00 3.85
1857 2930 5.048434 CGATGCACTCTATGAGAAGGTATCA 60.048 44.000 1.25 0.00 33.32 2.15
1926 2999 4.569943 TGAGATACTGCTCAGGTTTTCAC 58.430 43.478 1.66 0.00 39.84 3.18
1978 3051 3.892284 TGTGCAGGTTAAGTTGAAAGGA 58.108 40.909 0.00 0.00 0.00 3.36
2093 3166 7.410513 GCTTCAGTTACAACAGTAGTATCAACG 60.411 40.741 0.00 0.00 0.00 4.10
2134 3207 2.437895 GGTGGCCTTCTTACGCCC 60.438 66.667 3.32 0.00 45.07 6.13
2167 3240 9.372369 GAGGATGTTGATAAGGTATATGCTTAC 57.628 37.037 0.00 0.00 0.00 2.34
2276 3361 6.378661 TGGCAGTTGGATATATATCTGCTT 57.621 37.500 23.38 8.60 44.81 3.91
2279 3364 5.645067 GCAGTTGGATATATATCTGCTTGCA 59.355 40.000 19.72 7.61 42.98 4.08
2309 3394 2.456627 AGCCCTGCTCAAGAAGACA 58.543 52.632 0.00 0.00 30.62 3.41
2313 3398 1.423395 CCTGCTCAAGAAGACACGTC 58.577 55.000 0.00 0.00 0.00 4.34
2459 3546 3.195396 CCAATCTTGGTATGTTTGGGGTG 59.805 47.826 0.55 0.00 43.43 4.61
2574 3661 6.346477 TGTGCAACATAAGAACTACTCTCT 57.654 37.500 0.00 0.00 45.67 3.10
2575 3662 6.390721 TGTGCAACATAAGAACTACTCTCTC 58.609 40.000 0.00 0.00 45.67 3.20
2576 3663 5.808030 GTGCAACATAAGAACTACTCTCTCC 59.192 44.000 0.00 0.00 36.32 3.71
2577 3664 5.038033 GCAACATAAGAACTACTCTCTCCG 58.962 45.833 0.00 0.00 31.02 4.63
2578 3665 5.393243 GCAACATAAGAACTACTCTCTCCGT 60.393 44.000 0.00 0.00 31.02 4.69
2579 3666 6.622549 CAACATAAGAACTACTCTCTCCGTT 58.377 40.000 0.00 0.00 31.02 4.44
2580 3667 6.439675 ACATAAGAACTACTCTCTCCGTTC 57.560 41.667 0.00 0.00 36.81 3.95
2581 3668 5.357596 ACATAAGAACTACTCTCTCCGTTCC 59.642 44.000 0.00 0.00 37.15 3.62
2582 3669 3.724732 AGAACTACTCTCTCCGTTCCT 57.275 47.619 0.00 0.00 37.15 3.36
2583 3670 4.840716 AGAACTACTCTCTCCGTTCCTA 57.159 45.455 0.00 0.00 37.15 2.94
2584 3671 5.176741 AGAACTACTCTCTCCGTTCCTAA 57.823 43.478 0.00 0.00 37.15 2.69
2585 3672 5.568392 AGAACTACTCTCTCCGTTCCTAAA 58.432 41.667 0.00 0.00 37.15 1.85
2586 3673 6.189133 AGAACTACTCTCTCCGTTCCTAAAT 58.811 40.000 0.00 0.00 37.15 1.40
2587 3674 7.344913 AGAACTACTCTCTCCGTTCCTAAATA 58.655 38.462 0.00 0.00 37.15 1.40
2588 3675 8.000127 AGAACTACTCTCTCCGTTCCTAAATAT 59.000 37.037 0.00 0.00 37.15 1.28
2589 3676 8.536340 AACTACTCTCTCCGTTCCTAAATATT 57.464 34.615 0.00 0.00 0.00 1.28
2590 3677 8.536340 ACTACTCTCTCCGTTCCTAAATATTT 57.464 34.615 5.89 5.89 0.00 1.40
2591 3678 8.414778 ACTACTCTCTCCGTTCCTAAATATTTG 58.585 37.037 11.05 1.40 0.00 2.32
2592 3679 7.184067 ACTCTCTCCGTTCCTAAATATTTGT 57.816 36.000 11.05 0.00 0.00 2.83
2593 3680 7.266400 ACTCTCTCCGTTCCTAAATATTTGTC 58.734 38.462 11.05 0.00 0.00 3.18
2594 3681 7.124448 ACTCTCTCCGTTCCTAAATATTTGTCT 59.876 37.037 11.05 0.00 0.00 3.41
2595 3682 7.848128 TCTCTCCGTTCCTAAATATTTGTCTT 58.152 34.615 11.05 0.00 0.00 3.01
2596 3683 8.319146 TCTCTCCGTTCCTAAATATTTGTCTTT 58.681 33.333 11.05 0.00 0.00 2.52
2597 3684 8.488651 TCTCCGTTCCTAAATATTTGTCTTTC 57.511 34.615 11.05 0.00 0.00 2.62
2598 3685 8.319146 TCTCCGTTCCTAAATATTTGTCTTTCT 58.681 33.333 11.05 0.00 0.00 2.52
2599 3686 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
2600 3687 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
2601 3688 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
2614 3701 8.964476 TTGTCTTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
2615 3702 8.370493 TGTCTTTCTAGAGATTTCAACAAGTG 57.630 34.615 0.00 0.00 0.00 3.16
2616 3703 8.204160 TGTCTTTCTAGAGATTTCAACAAGTGA 58.796 33.333 0.00 0.00 0.00 3.41
2617 3704 8.491950 GTCTTTCTAGAGATTTCAACAAGTGAC 58.508 37.037 0.00 0.00 35.39 3.67
2618 3705 8.424918 TCTTTCTAGAGATTTCAACAAGTGACT 58.575 33.333 0.00 0.00 35.39 3.41
2619 3706 9.698309 CTTTCTAGAGATTTCAACAAGTGACTA 57.302 33.333 0.00 0.00 35.39 2.59
2620 3707 9.477484 TTTCTAGAGATTTCAACAAGTGACTAC 57.523 33.333 0.00 0.00 35.39 2.73
2621 3708 8.178313 TCTAGAGATTTCAACAAGTGACTACA 57.822 34.615 0.00 0.00 35.39 2.74
2622 3709 8.807118 TCTAGAGATTTCAACAAGTGACTACAT 58.193 33.333 0.00 0.00 35.39 2.29
2624 3711 8.764524 AGAGATTTCAACAAGTGACTACATAC 57.235 34.615 0.00 0.00 35.39 2.39
2625 3712 7.542477 AGAGATTTCAACAAGTGACTACATACG 59.458 37.037 0.00 0.00 35.39 3.06
2626 3713 7.375834 AGATTTCAACAAGTGACTACATACGA 58.624 34.615 0.00 0.00 35.39 3.43
2627 3714 7.870954 AGATTTCAACAAGTGACTACATACGAA 59.129 33.333 0.00 0.00 35.39 3.85
2628 3715 7.402811 TTTCAACAAGTGACTACATACGAAG 57.597 36.000 0.00 0.00 35.39 3.79
2629 3716 4.921515 TCAACAAGTGACTACATACGAAGC 59.078 41.667 0.00 0.00 0.00 3.86
2630 3717 4.514781 ACAAGTGACTACATACGAAGCA 57.485 40.909 0.00 0.00 0.00 3.91
2631 3718 4.878439 ACAAGTGACTACATACGAAGCAA 58.122 39.130 0.00 0.00 0.00 3.91
2632 3719 5.294356 ACAAGTGACTACATACGAAGCAAA 58.706 37.500 0.00 0.00 0.00 3.68
2633 3720 5.756347 ACAAGTGACTACATACGAAGCAAAA 59.244 36.000 0.00 0.00 0.00 2.44
2634 3721 6.426937 ACAAGTGACTACATACGAAGCAAAAT 59.573 34.615 0.00 0.00 0.00 1.82
2635 3722 6.408858 AGTGACTACATACGAAGCAAAATG 57.591 37.500 0.00 0.00 0.00 2.32
2636 3723 6.163476 AGTGACTACATACGAAGCAAAATGA 58.837 36.000 0.00 0.00 0.00 2.57
2637 3724 6.311445 AGTGACTACATACGAAGCAAAATGAG 59.689 38.462 0.00 0.00 0.00 2.90
2638 3725 6.090898 GTGACTACATACGAAGCAAAATGAGT 59.909 38.462 0.00 0.00 0.00 3.41
2639 3726 6.090763 TGACTACATACGAAGCAAAATGAGTG 59.909 38.462 0.00 0.00 0.00 3.51
2640 3727 6.163476 ACTACATACGAAGCAAAATGAGTGA 58.837 36.000 0.00 0.00 0.00 3.41
2641 3728 5.940192 ACATACGAAGCAAAATGAGTGAA 57.060 34.783 0.00 0.00 0.00 3.18
2642 3729 6.500684 ACATACGAAGCAAAATGAGTGAAT 57.499 33.333 0.00 0.00 0.00 2.57
2643 3730 6.546395 ACATACGAAGCAAAATGAGTGAATC 58.454 36.000 0.00 0.00 0.00 2.52
2644 3731 6.372659 ACATACGAAGCAAAATGAGTGAATCT 59.627 34.615 0.00 0.00 0.00 2.40
2645 3732 7.549134 ACATACGAAGCAAAATGAGTGAATCTA 59.451 33.333 0.00 0.00 0.00 1.98
2646 3733 6.170675 ACGAAGCAAAATGAGTGAATCTAC 57.829 37.500 0.00 0.00 0.00 2.59
2647 3734 5.700832 ACGAAGCAAAATGAGTGAATCTACA 59.299 36.000 0.00 0.00 0.00 2.74
2648 3735 6.017933 CGAAGCAAAATGAGTGAATCTACAC 58.982 40.000 0.00 0.00 40.60 2.90
2681 3768 7.956328 ATGTCTATATACATCCGTATGTGGT 57.044 36.000 3.56 0.00 45.99 4.16
2683 3770 8.502105 TGTCTATATACATCCGTATGTGGTAG 57.498 38.462 3.56 3.93 45.99 3.18
2684 3771 8.105197 TGTCTATATACATCCGTATGTGGTAGT 58.895 37.037 3.56 0.00 45.99 2.73
2685 3772 8.610896 GTCTATATACATCCGTATGTGGTAGTC 58.389 40.741 3.56 0.00 45.99 2.59
2686 3773 8.546322 TCTATATACATCCGTATGTGGTAGTCT 58.454 37.037 3.56 0.00 45.99 3.24
2687 3774 9.828039 CTATATACATCCGTATGTGGTAGTCTA 57.172 37.037 3.56 0.00 45.99 2.59
2689 3776 9.696572 ATATACATCCGTATGTGGTAGTCTATT 57.303 33.333 3.56 0.00 45.99 1.73
2690 3777 6.726490 ACATCCGTATGTGGTAGTCTATTT 57.274 37.500 0.00 0.00 44.79 1.40
2691 3778 6.513180 ACATCCGTATGTGGTAGTCTATTTG 58.487 40.000 0.00 0.00 44.79 2.32
2692 3779 6.322969 ACATCCGTATGTGGTAGTCTATTTGA 59.677 38.462 0.00 0.00 44.79 2.69
2693 3780 6.778834 TCCGTATGTGGTAGTCTATTTGAA 57.221 37.500 0.00 0.00 0.00 2.69
2694 3781 7.172868 TCCGTATGTGGTAGTCTATTTGAAA 57.827 36.000 0.00 0.00 0.00 2.69
2695 3782 7.788026 TCCGTATGTGGTAGTCTATTTGAAAT 58.212 34.615 0.00 0.00 0.00 2.17
2696 3783 7.924412 TCCGTATGTGGTAGTCTATTTGAAATC 59.076 37.037 0.00 0.00 0.00 2.17
2697 3784 7.926555 CCGTATGTGGTAGTCTATTTGAAATCT 59.073 37.037 0.00 0.00 0.00 2.40
2698 3785 8.969267 CGTATGTGGTAGTCTATTTGAAATCTC 58.031 37.037 0.00 0.00 0.00 2.75
2726 3813 7.625828 AAAGACAAATATTTAGGAACGGAGG 57.374 36.000 0.00 0.00 0.00 4.30
2727 3814 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
2762 3849 6.727824 AGAACCACTGAATGTAAATTCTCG 57.272 37.500 7.16 1.41 0.00 4.04
2905 3993 8.600449 AGATATATCAAAGCTGACTGTTTAGC 57.400 34.615 15.08 9.20 40.18 3.09
3003 4257 1.899437 TTTGCGTAGGCCCTCCTGAG 61.899 60.000 0.00 0.00 44.08 3.35
3024 4278 9.399797 CCTGAGGCTATAATCATATAATTTGCA 57.600 33.333 0.00 0.00 0.00 4.08
3104 7893 6.476378 ACTAATTTCAGGTTCATGCTACAGT 58.524 36.000 0.00 0.00 0.00 3.55
3146 7935 5.420739 TGTTCTTTTTACCTGAGCTGGTTTT 59.579 36.000 0.33 0.00 41.22 2.43
3210 7999 4.281525 ACGCGTTTTAGTTTGTGACATT 57.718 36.364 5.58 0.00 0.00 2.71
3282 8139 8.245195 TGTGGCAGTTATCAATAGATACTGTA 57.755 34.615 0.00 0.00 37.72 2.74
3299 8156 8.986991 AGATACTGTATGTCTCCTGATTCTTTT 58.013 33.333 4.79 0.00 0.00 2.27
3372 8229 9.761504 TGAATTTTTCTTATGATTGTGCTTCAA 57.238 25.926 0.00 0.00 40.53 2.69
3410 8268 5.163713 GCAGCTGTTAGACCTTTAATCCTTG 60.164 44.000 16.64 0.00 0.00 3.61
3416 8274 7.514721 TGTTAGACCTTTAATCCTTGAGTTGT 58.485 34.615 0.00 0.00 0.00 3.32
3417 8275 7.444183 TGTTAGACCTTTAATCCTTGAGTTGTG 59.556 37.037 0.00 0.00 0.00 3.33
3424 8282 3.795688 ATCCTTGAGTTGTGACACCAT 57.204 42.857 2.45 0.00 0.00 3.55
3426 8284 2.437651 TCCTTGAGTTGTGACACCATGA 59.562 45.455 2.45 0.00 0.00 3.07
3429 8287 4.279169 CCTTGAGTTGTGACACCATGATTT 59.721 41.667 2.45 0.00 0.00 2.17
3431 8289 5.850557 TGAGTTGTGACACCATGATTTTT 57.149 34.783 2.45 0.00 0.00 1.94
3435 8293 6.275335 AGTTGTGACACCATGATTTTTGAAG 58.725 36.000 2.45 0.00 0.00 3.02
3438 8296 6.969366 TGTGACACCATGATTTTTGAAGTAG 58.031 36.000 2.45 0.00 0.00 2.57
3445 8303 8.776470 CACCATGATTTTTGAAGTAGCAAAATT 58.224 29.630 0.00 0.00 44.45 1.82
3447 8305 8.445493 CCATGATTTTTGAAGTAGCAAAATTCC 58.555 33.333 15.74 6.05 44.45 3.01
3450 8308 9.206870 TGATTTTTGAAGTAGCAAAATTCCATC 57.793 29.630 15.74 10.83 44.45 3.51
3451 8309 7.636259 TTTTTGAAGTAGCAAAATTCCATCG 57.364 32.000 0.00 0.00 44.45 3.84
3487 8345 6.485830 TGAGCCTAACTAAGTTGCTCATAT 57.514 37.500 14.57 0.00 42.45 1.78
3684 8542 8.537728 AGGAATAATGTTATGGAGAATTTGCA 57.462 30.769 0.00 0.00 0.00 4.08
3843 8701 9.612620 CATTCAGAATAGTGTCAACCTAAAAAC 57.387 33.333 0.00 0.00 0.00 2.43
3854 8712 6.978080 TGTCAACCTAAAAACAAAGATTGCTC 59.022 34.615 0.00 0.00 0.00 4.26
3875 8757 0.394762 TGGCTTGGATGATGCTGGTC 60.395 55.000 0.00 0.00 0.00 4.02
3876 8758 1.442526 GGCTTGGATGATGCTGGTCG 61.443 60.000 0.00 0.00 0.00 4.79
3945 8846 3.093057 ACAGGTCATGAGGAGTACAGAC 58.907 50.000 0.00 0.00 0.00 3.51
3966 8868 9.193806 ACAGACCAAAATGATGATTTATAAGCT 57.806 29.630 0.00 0.00 31.18 3.74
4020 8924 7.226720 TGAAAAGTTTCAGGTTACAGAAGCTAG 59.773 37.037 2.32 0.00 41.49 3.42
4061 8965 2.281208 GCCGGTGCACACAAGGTA 60.281 61.111 20.43 0.00 37.47 3.08
4074 8978 3.951680 ACACAAGGTAGGTTTCAGTTTGG 59.048 43.478 0.00 0.00 0.00 3.28
4330 9238 0.615850 GGTCTGTGGAAAGAGGAGGG 59.384 60.000 0.00 0.00 0.00 4.30
4335 9243 0.175989 GTGGAAAGAGGAGGGCGTAG 59.824 60.000 0.00 0.00 0.00 3.51
4532 9455 1.137086 CCCTGTAGTCCATGAAGACGG 59.863 57.143 0.00 0.00 41.83 4.79
4533 9456 2.100197 CCTGTAGTCCATGAAGACGGA 58.900 52.381 0.00 0.00 41.83 4.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.262423 AAGCTCTCTTCGCACCTTTT 57.738 45.000 0.00 0.00 0.00 2.27
1 2 2.262423 AAAGCTCTCTTCGCACCTTT 57.738 45.000 0.00 0.00 0.00 3.11
2 3 1.876156 CAAAAGCTCTCTTCGCACCTT 59.124 47.619 0.00 0.00 0.00 3.50
3 4 1.202698 ACAAAAGCTCTCTTCGCACCT 60.203 47.619 0.00 0.00 0.00 4.00
4 5 1.069636 CACAAAAGCTCTCTTCGCACC 60.070 52.381 0.00 0.00 0.00 5.01
5 6 1.867233 TCACAAAAGCTCTCTTCGCAC 59.133 47.619 0.00 0.00 0.00 5.34
6 7 2.238942 TCACAAAAGCTCTCTTCGCA 57.761 45.000 0.00 0.00 0.00 5.10
7 8 3.820777 AATCACAAAAGCTCTCTTCGC 57.179 42.857 0.00 0.00 0.00 4.70
8 9 4.380974 GCAAAATCACAAAAGCTCTCTTCG 59.619 41.667 0.00 0.00 0.00 3.79
9 10 5.284079 TGCAAAATCACAAAAGCTCTCTTC 58.716 37.500 0.00 0.00 0.00 2.87
10 11 5.266733 TGCAAAATCACAAAAGCTCTCTT 57.733 34.783 0.00 0.00 0.00 2.85
11 12 4.924305 TGCAAAATCACAAAAGCTCTCT 57.076 36.364 0.00 0.00 0.00 3.10
12 13 4.084693 GCTTGCAAAATCACAAAAGCTCTC 60.085 41.667 0.00 0.00 37.60 3.20
13 14 3.805971 GCTTGCAAAATCACAAAAGCTCT 59.194 39.130 0.00 0.00 37.60 4.09
14 15 3.059393 GGCTTGCAAAATCACAAAAGCTC 60.059 43.478 0.00 0.00 39.87 4.09
15 16 2.874086 GGCTTGCAAAATCACAAAAGCT 59.126 40.909 0.00 0.00 39.87 3.74
16 17 2.031769 GGGCTTGCAAAATCACAAAAGC 60.032 45.455 0.00 0.00 39.38 3.51
17 18 3.204526 TGGGCTTGCAAAATCACAAAAG 58.795 40.909 0.00 0.00 0.00 2.27
18 19 3.272574 TGGGCTTGCAAAATCACAAAA 57.727 38.095 0.00 0.00 0.00 2.44
19 20 2.996249 TGGGCTTGCAAAATCACAAA 57.004 40.000 0.00 0.00 0.00 2.83
20 21 2.996249 TTGGGCTTGCAAAATCACAA 57.004 40.000 0.00 3.61 0.00 3.33
21 22 3.488778 AATTGGGCTTGCAAAATCACA 57.511 38.095 0.00 0.00 0.00 3.58
22 23 3.609879 GCAAATTGGGCTTGCAAAATCAC 60.610 43.478 0.00 0.00 46.78 3.06
23 24 2.553172 GCAAATTGGGCTTGCAAAATCA 59.447 40.909 0.00 0.00 46.78 2.57
24 25 3.206034 GCAAATTGGGCTTGCAAAATC 57.794 42.857 0.00 0.00 46.78 2.17
30 31 0.806241 CAATGGCAAATTGGGCTTGC 59.194 50.000 8.03 0.00 46.82 4.01
31 32 1.807742 CACAATGGCAAATTGGGCTTG 59.192 47.619 8.03 11.38 33.56 4.01
32 33 1.698532 TCACAATGGCAAATTGGGCTT 59.301 42.857 8.03 0.00 32.72 4.35
33 34 1.276989 CTCACAATGGCAAATTGGGCT 59.723 47.619 8.03 0.00 32.72 5.19
34 35 1.275856 TCTCACAATGGCAAATTGGGC 59.724 47.619 13.93 0.00 32.72 5.36
35 36 2.093869 CCTCTCACAATGGCAAATTGGG 60.094 50.000 13.93 10.75 33.91 4.12
36 37 2.827322 TCCTCTCACAATGGCAAATTGG 59.173 45.455 13.93 5.39 33.56 3.16
37 38 3.367703 GGTCCTCTCACAATGGCAAATTG 60.368 47.826 9.21 9.21 35.29 2.32
38 39 2.827921 GGTCCTCTCACAATGGCAAATT 59.172 45.455 0.00 0.00 0.00 1.82
39 40 2.450476 GGTCCTCTCACAATGGCAAAT 58.550 47.619 0.00 0.00 0.00 2.32
40 41 1.881925 CGGTCCTCTCACAATGGCAAA 60.882 52.381 0.00 0.00 0.00 3.68
41 42 0.321564 CGGTCCTCTCACAATGGCAA 60.322 55.000 0.00 0.00 0.00 4.52
42 43 1.296392 CGGTCCTCTCACAATGGCA 59.704 57.895 0.00 0.00 0.00 4.92
43 44 1.450312 CCGGTCCTCTCACAATGGC 60.450 63.158 0.00 0.00 0.00 4.40
44 45 1.450312 GCCGGTCCTCTCACAATGG 60.450 63.158 1.90 0.00 0.00 3.16
45 46 0.824109 TAGCCGGTCCTCTCACAATG 59.176 55.000 1.90 0.00 0.00 2.82
46 47 1.115467 CTAGCCGGTCCTCTCACAAT 58.885 55.000 1.90 0.00 0.00 2.71
47 48 0.039180 TCTAGCCGGTCCTCTCACAA 59.961 55.000 1.90 0.00 0.00 3.33
48 49 0.259065 ATCTAGCCGGTCCTCTCACA 59.741 55.000 1.90 0.00 0.00 3.58
49 50 1.404843 AATCTAGCCGGTCCTCTCAC 58.595 55.000 1.90 0.00 0.00 3.51
50 51 2.160721 AAATCTAGCCGGTCCTCTCA 57.839 50.000 1.90 0.00 0.00 3.27
51 52 2.483889 CCAAAATCTAGCCGGTCCTCTC 60.484 54.545 1.90 0.00 0.00 3.20
52 53 1.486726 CCAAAATCTAGCCGGTCCTCT 59.513 52.381 1.90 0.00 0.00 3.69
53 54 1.475213 CCCAAAATCTAGCCGGTCCTC 60.475 57.143 1.90 0.00 0.00 3.71
54 55 0.546598 CCCAAAATCTAGCCGGTCCT 59.453 55.000 1.90 0.00 0.00 3.85
55 56 0.544697 TCCCAAAATCTAGCCGGTCC 59.455 55.000 1.90 0.00 0.00 4.46
56 57 2.158813 TGATCCCAAAATCTAGCCGGTC 60.159 50.000 1.90 0.00 0.00 4.79
57 58 1.843851 TGATCCCAAAATCTAGCCGGT 59.156 47.619 1.90 0.00 0.00 5.28
58 59 2.638480 TGATCCCAAAATCTAGCCGG 57.362 50.000 0.00 0.00 0.00 6.13
59 60 4.981806 TTTTGATCCCAAAATCTAGCCG 57.018 40.909 0.00 0.00 44.62 5.52
66 67 8.542080 TATGAAAGCATCTTTTGATCCCAAAAT 58.458 29.630 4.13 0.00 41.54 1.82
67 68 6.172136 TGAAAGCATCTTTTGATCCCAAAA 57.828 33.333 0.00 0.00 46.55 2.44
68 69 5.804944 TGAAAGCATCTTTTGATCCCAAA 57.195 34.783 0.00 0.00 40.24 3.28
69 70 6.436847 TGTATGAAAGCATCTTTTGATCCCAA 59.563 34.615 0.00 0.00 36.97 4.12
70 71 5.951148 TGTATGAAAGCATCTTTTGATCCCA 59.049 36.000 0.00 0.00 36.97 4.37
71 72 6.455360 TGTATGAAAGCATCTTTTGATCCC 57.545 37.500 0.00 0.00 36.97 3.85
72 73 7.709947 TGATGTATGAAAGCATCTTTTGATCC 58.290 34.615 0.00 0.00 41.33 3.36
73 74 9.395707 GATGATGTATGAAAGCATCTTTTGATC 57.604 33.333 0.00 0.00 41.33 2.92
74 75 8.358148 GGATGATGTATGAAAGCATCTTTTGAT 58.642 33.333 0.00 0.00 41.33 2.57
75 76 7.339976 TGGATGATGTATGAAAGCATCTTTTGA 59.660 33.333 0.00 0.00 41.33 2.69
76 77 7.434307 GTGGATGATGTATGAAAGCATCTTTTG 59.566 37.037 0.00 0.00 41.33 2.44
77 78 7.486647 GTGGATGATGTATGAAAGCATCTTTT 58.513 34.615 0.00 0.00 41.33 2.27
78 79 6.238566 CGTGGATGATGTATGAAAGCATCTTT 60.239 38.462 0.00 0.00 41.33 2.52
79 80 5.237996 CGTGGATGATGTATGAAAGCATCTT 59.762 40.000 0.00 0.00 41.33 2.40
80 81 4.753610 CGTGGATGATGTATGAAAGCATCT 59.246 41.667 0.00 0.00 41.33 2.90
81 82 4.612259 GCGTGGATGATGTATGAAAGCATC 60.612 45.833 0.00 0.00 41.19 3.91
82 83 3.251729 GCGTGGATGATGTATGAAAGCAT 59.748 43.478 0.00 0.00 38.54 3.79
83 84 2.613595 GCGTGGATGATGTATGAAAGCA 59.386 45.455 0.00 0.00 0.00 3.91
84 85 2.874701 AGCGTGGATGATGTATGAAAGC 59.125 45.455 0.00 0.00 0.00 3.51
85 86 4.333649 ACAAGCGTGGATGATGTATGAAAG 59.666 41.667 4.26 0.00 0.00 2.62
86 87 4.094739 CACAAGCGTGGATGATGTATGAAA 59.905 41.667 4.26 0.00 39.64 2.69
87 88 3.622612 CACAAGCGTGGATGATGTATGAA 59.377 43.478 4.26 0.00 39.64 2.57
88 89 3.197265 CACAAGCGTGGATGATGTATGA 58.803 45.455 4.26 0.00 39.64 2.15
89 90 3.597377 CACAAGCGTGGATGATGTATG 57.403 47.619 4.26 0.00 39.64 2.39
101 102 0.518636 GTGCATGATCACACAAGCGT 59.481 50.000 10.69 0.00 36.77 5.07
102 103 0.518195 TGTGCATGATCACACAAGCG 59.482 50.000 14.82 0.00 43.48 4.68
115 116 3.800531 TCTCGATGATCATGTTGTGCAT 58.199 40.909 14.30 0.00 38.60 3.96
116 117 3.249986 TCTCGATGATCATGTTGTGCA 57.750 42.857 14.30 0.00 0.00 4.57
117 118 4.808077 ATTCTCGATGATCATGTTGTGC 57.192 40.909 14.30 0.00 0.00 4.57
118 119 6.361114 GCTTATTCTCGATGATCATGTTGTG 58.639 40.000 14.30 4.14 0.00 3.33
119 120 5.176406 CGCTTATTCTCGATGATCATGTTGT 59.824 40.000 14.30 0.00 0.00 3.32
120 121 5.176406 ACGCTTATTCTCGATGATCATGTTG 59.824 40.000 14.30 2.83 0.00 3.33
121 122 5.176406 CACGCTTATTCTCGATGATCATGTT 59.824 40.000 14.30 0.00 0.00 2.71
122 123 4.683320 CACGCTTATTCTCGATGATCATGT 59.317 41.667 14.30 0.00 0.00 3.21
123 124 4.091075 CCACGCTTATTCTCGATGATCATG 59.909 45.833 14.30 5.89 0.00 3.07
124 125 4.240888 CCACGCTTATTCTCGATGATCAT 58.759 43.478 8.25 8.25 0.00 2.45
125 126 3.642705 CCACGCTTATTCTCGATGATCA 58.357 45.455 0.00 0.00 0.00 2.92
126 127 2.410053 GCCACGCTTATTCTCGATGATC 59.590 50.000 0.00 0.00 0.00 2.92
127 128 2.408050 GCCACGCTTATTCTCGATGAT 58.592 47.619 0.00 0.00 0.00 2.45
128 129 1.538204 GGCCACGCTTATTCTCGATGA 60.538 52.381 0.00 0.00 0.00 2.92
129 130 0.861837 GGCCACGCTTATTCTCGATG 59.138 55.000 0.00 0.00 0.00 3.84
130 131 0.464036 TGGCCACGCTTATTCTCGAT 59.536 50.000 0.00 0.00 0.00 3.59
131 132 0.248012 TTGGCCACGCTTATTCTCGA 59.752 50.000 3.88 0.00 0.00 4.04
132 133 0.652592 CTTGGCCACGCTTATTCTCG 59.347 55.000 3.88 0.00 0.00 4.04
133 134 2.024176 TCTTGGCCACGCTTATTCTC 57.976 50.000 3.88 0.00 0.00 2.87
134 135 2.717639 ATCTTGGCCACGCTTATTCT 57.282 45.000 3.88 0.00 0.00 2.40
135 136 3.782889 AAATCTTGGCCACGCTTATTC 57.217 42.857 3.88 0.00 0.00 1.75
136 137 4.335594 GTCTAAATCTTGGCCACGCTTATT 59.664 41.667 3.88 0.00 0.00 1.40
137 138 3.877508 GTCTAAATCTTGGCCACGCTTAT 59.122 43.478 3.88 0.00 0.00 1.73
138 139 3.055385 AGTCTAAATCTTGGCCACGCTTA 60.055 43.478 3.88 4.19 0.00 3.09
139 140 2.084546 GTCTAAATCTTGGCCACGCTT 58.915 47.619 3.88 0.00 0.00 4.68
140 141 1.279271 AGTCTAAATCTTGGCCACGCT 59.721 47.619 3.88 0.00 0.00 5.07
141 142 1.739067 AGTCTAAATCTTGGCCACGC 58.261 50.000 3.88 0.00 0.00 5.34
142 143 4.113354 GAGTAGTCTAAATCTTGGCCACG 58.887 47.826 3.88 2.81 0.00 4.94
143 144 5.105310 TGAGAGTAGTCTAAATCTTGGCCAC 60.105 44.000 3.88 0.00 30.97 5.01
144 145 5.023452 TGAGAGTAGTCTAAATCTTGGCCA 58.977 41.667 0.00 0.00 30.97 5.36
145 146 5.128008 ACTGAGAGTAGTCTAAATCTTGGCC 59.872 44.000 0.00 0.00 30.97 5.36
146 147 6.215495 ACTGAGAGTAGTCTAAATCTTGGC 57.785 41.667 0.00 0.00 30.97 4.52
147 148 9.126151 TCATACTGAGAGTAGTCTAAATCTTGG 57.874 37.037 0.00 0.00 33.66 3.61
164 165 4.341806 AGATGTCCAAGAGCTCATACTGAG 59.658 45.833 17.77 0.00 46.90 3.35
165 166 4.285020 AGATGTCCAAGAGCTCATACTGA 58.715 43.478 17.77 1.90 0.00 3.41
166 167 4.619973 GAGATGTCCAAGAGCTCATACTG 58.380 47.826 17.77 7.28 0.00 2.74
167 168 3.317711 CGAGATGTCCAAGAGCTCATACT 59.682 47.826 17.77 3.43 0.00 2.12
168 169 3.067461 ACGAGATGTCCAAGAGCTCATAC 59.933 47.826 17.77 8.52 0.00 2.39
169 170 3.067320 CACGAGATGTCCAAGAGCTCATA 59.933 47.826 17.77 0.00 0.00 2.15
170 171 2.106566 ACGAGATGTCCAAGAGCTCAT 58.893 47.619 17.77 0.00 0.00 2.90
171 172 1.203287 CACGAGATGTCCAAGAGCTCA 59.797 52.381 17.77 0.00 0.00 4.26
172 173 1.919918 CACGAGATGTCCAAGAGCTC 58.080 55.000 5.27 5.27 0.00 4.09
173 174 0.108424 GCACGAGATGTCCAAGAGCT 60.108 55.000 0.00 0.00 0.00 4.09
174 175 1.416813 CGCACGAGATGTCCAAGAGC 61.417 60.000 0.00 0.00 0.00 4.09
175 176 0.171231 TCGCACGAGATGTCCAAGAG 59.829 55.000 0.00 0.00 0.00 2.85
176 177 0.171231 CTCGCACGAGATGTCCAAGA 59.829 55.000 14.73 0.00 44.53 3.02
177 178 0.109086 ACTCGCACGAGATGTCCAAG 60.109 55.000 25.53 0.00 44.53 3.61
178 179 0.388520 CACTCGCACGAGATGTCCAA 60.389 55.000 25.53 0.00 44.53 3.53
179 180 1.212751 CACTCGCACGAGATGTCCA 59.787 57.895 25.53 0.00 44.53 4.02
180 181 2.161486 GCACTCGCACGAGATGTCC 61.161 63.158 25.53 5.89 44.53 4.02
181 182 2.500442 CGCACTCGCACGAGATGTC 61.500 63.158 25.53 13.77 44.53 3.06
182 183 2.504899 CGCACTCGCACGAGATGT 60.505 61.111 25.53 2.26 44.53 3.06
183 184 3.250323 CCGCACTCGCACGAGATG 61.250 66.667 25.53 18.94 44.53 2.90
211 212 3.302344 CAAAACGGGCCACCCTGG 61.302 66.667 4.39 0.00 42.67 4.45
212 213 2.131067 AACAAAACGGGCCACCCTG 61.131 57.895 4.39 0.00 42.67 4.45
213 214 2.131067 CAACAAAACGGGCCACCCT 61.131 57.895 4.39 0.00 42.67 4.34
214 215 2.419620 CAACAAAACGGGCCACCC 59.580 61.111 4.39 0.00 41.09 4.61
215 216 2.279851 GCAACAAAACGGGCCACC 60.280 61.111 4.39 0.00 0.00 4.61
216 217 2.279851 GGCAACAAAACGGGCCAC 60.280 61.111 4.39 0.00 45.70 5.01
218 219 2.338620 GAGGCAACAAAACGGGCC 59.661 61.111 0.00 0.00 46.77 5.80
219 220 0.891904 TAGGAGGCAACAAAACGGGC 60.892 55.000 0.00 0.00 41.41 6.13
220 221 1.743394 GATAGGAGGCAACAAAACGGG 59.257 52.381 0.00 0.00 41.41 5.28
221 222 2.432444 TGATAGGAGGCAACAAAACGG 58.568 47.619 0.00 0.00 41.41 4.44
222 223 3.731867 GCATGATAGGAGGCAACAAAACG 60.732 47.826 0.00 0.00 41.41 3.60
223 224 3.429410 GGCATGATAGGAGGCAACAAAAC 60.429 47.826 0.00 0.00 41.41 2.43
224 225 2.760092 GGCATGATAGGAGGCAACAAAA 59.240 45.455 0.00 0.00 41.41 2.44
225 226 2.291475 TGGCATGATAGGAGGCAACAAA 60.291 45.455 0.00 0.00 41.41 2.83
226 227 1.284491 TGGCATGATAGGAGGCAACAA 59.716 47.619 0.00 0.00 41.41 2.83
227 228 0.918258 TGGCATGATAGGAGGCAACA 59.082 50.000 0.00 0.00 41.41 3.33
228 229 2.283145 ATGGCATGATAGGAGGCAAC 57.717 50.000 0.00 0.00 41.29 4.17
229 230 2.811504 CGAATGGCATGATAGGAGGCAA 60.812 50.000 0.00 0.00 41.29 4.52
230 231 1.271001 CGAATGGCATGATAGGAGGCA 60.271 52.381 0.00 0.00 42.19 4.75
231 232 1.002430 TCGAATGGCATGATAGGAGGC 59.998 52.381 0.00 0.00 0.00 4.70
232 233 2.693069 GTCGAATGGCATGATAGGAGG 58.307 52.381 0.00 0.00 0.00 4.30
233 234 2.288457 ACGTCGAATGGCATGATAGGAG 60.288 50.000 0.00 0.00 0.00 3.69
234 235 1.686587 ACGTCGAATGGCATGATAGGA 59.313 47.619 0.00 0.00 0.00 2.94
235 236 1.794701 CACGTCGAATGGCATGATAGG 59.205 52.381 0.00 0.00 0.00 2.57
236 237 1.193203 GCACGTCGAATGGCATGATAG 59.807 52.381 0.00 0.00 0.00 2.08
237 238 1.217001 GCACGTCGAATGGCATGATA 58.783 50.000 0.00 0.00 0.00 2.15
238 239 1.439353 GGCACGTCGAATGGCATGAT 61.439 55.000 16.84 0.00 42.03 2.45
239 240 2.106074 GGCACGTCGAATGGCATGA 61.106 57.895 16.84 0.00 42.03 3.07
240 241 2.404789 GGCACGTCGAATGGCATG 59.595 61.111 16.84 0.00 42.03 4.06
255 256 0.940126 AGATCATCATGCGTTTCGGC 59.060 50.000 0.00 0.00 0.00 5.54
256 257 2.609002 TGAAGATCATCATGCGTTTCGG 59.391 45.455 0.00 0.00 0.00 4.30
257 258 3.553105 TCTGAAGATCATCATGCGTTTCG 59.447 43.478 0.30 0.00 0.00 3.46
258 259 5.292834 TCTTCTGAAGATCATCATGCGTTTC 59.707 40.000 15.82 0.00 31.20 2.78
259 260 5.181009 TCTTCTGAAGATCATCATGCGTTT 58.819 37.500 15.82 0.00 31.20 3.60
260 261 4.763073 TCTTCTGAAGATCATCATGCGTT 58.237 39.130 15.82 0.00 31.20 4.84
261 262 4.397481 TCTTCTGAAGATCATCATGCGT 57.603 40.909 15.82 0.00 31.20 5.24
262 263 5.465724 TGATTCTTCTGAAGATCATCATGCG 59.534 40.000 22.06 0.00 37.38 4.73
263 264 6.862711 TGATTCTTCTGAAGATCATCATGC 57.137 37.500 22.06 9.41 37.38 4.06
272 273 9.543783 CACTCATTGATATGATTCTTCTGAAGA 57.456 33.333 15.82 15.82 39.94 2.87
273 274 8.775527 CCACTCATTGATATGATTCTTCTGAAG 58.224 37.037 11.18 11.18 39.94 3.02
274 275 8.270030 ACCACTCATTGATATGATTCTTCTGAA 58.730 33.333 0.00 0.00 39.94 3.02
275 276 7.713942 CACCACTCATTGATATGATTCTTCTGA 59.286 37.037 0.00 0.00 39.94 3.27
276 277 7.041303 CCACCACTCATTGATATGATTCTTCTG 60.041 40.741 0.00 0.00 39.94 3.02
277 278 6.996879 CCACCACTCATTGATATGATTCTTCT 59.003 38.462 0.00 0.00 39.94 2.85
278 279 6.206243 CCCACCACTCATTGATATGATTCTTC 59.794 42.308 0.00 0.00 39.94 2.87
279 280 6.066690 CCCACCACTCATTGATATGATTCTT 58.933 40.000 0.00 0.00 39.94 2.52
280 281 5.628130 CCCACCACTCATTGATATGATTCT 58.372 41.667 0.00 0.00 39.94 2.40
281 282 4.217118 GCCCACCACTCATTGATATGATTC 59.783 45.833 0.00 0.00 39.94 2.52
282 283 4.147321 GCCCACCACTCATTGATATGATT 58.853 43.478 0.00 0.00 39.94 2.57
283 284 3.138839 TGCCCACCACTCATTGATATGAT 59.861 43.478 0.00 0.00 39.94 2.45
284 285 2.509131 TGCCCACCACTCATTGATATGA 59.491 45.455 0.74 0.00 38.45 2.15
285 286 2.934887 TGCCCACCACTCATTGATATG 58.065 47.619 0.00 0.00 0.00 1.78
286 287 3.138839 TCATGCCCACCACTCATTGATAT 59.861 43.478 0.00 0.00 0.00 1.63
287 288 2.509131 TCATGCCCACCACTCATTGATA 59.491 45.455 0.00 0.00 0.00 2.15
288 289 1.285667 TCATGCCCACCACTCATTGAT 59.714 47.619 0.00 0.00 0.00 2.57
289 290 0.697658 TCATGCCCACCACTCATTGA 59.302 50.000 0.00 0.00 0.00 2.57
290 291 1.548081 TTCATGCCCACCACTCATTG 58.452 50.000 0.00 0.00 0.00 2.82
291 292 2.307496 TTTCATGCCCACCACTCATT 57.693 45.000 0.00 0.00 0.00 2.57
292 293 2.104967 CATTTCATGCCCACCACTCAT 58.895 47.619 0.00 0.00 0.00 2.90
293 294 1.548081 CATTTCATGCCCACCACTCA 58.452 50.000 0.00 0.00 0.00 3.41
294 295 0.819582 CCATTTCATGCCCACCACTC 59.180 55.000 0.00 0.00 0.00 3.51
295 296 1.259840 GCCATTTCATGCCCACCACT 61.260 55.000 0.00 0.00 0.00 4.00
296 297 1.218854 GCCATTTCATGCCCACCAC 59.781 57.895 0.00 0.00 0.00 4.16
297 298 1.988956 GGCCATTTCATGCCCACCA 60.989 57.895 0.00 0.00 41.97 4.17
298 299 2.902584 GGCCATTTCATGCCCACC 59.097 61.111 0.00 0.00 41.97 4.61
299 300 2.051518 TCGGCCATTTCATGCCCAC 61.052 57.895 2.24 0.00 45.07 4.61
300 301 2.051518 GTCGGCCATTTCATGCCCA 61.052 57.895 2.24 0.00 45.07 5.36
301 302 1.603236 TTGTCGGCCATTTCATGCCC 61.603 55.000 2.24 0.00 45.07 5.36
302 303 0.246086 TTTGTCGGCCATTTCATGCC 59.754 50.000 2.24 0.00 44.41 4.40
303 304 1.202114 TCTTTGTCGGCCATTTCATGC 59.798 47.619 2.24 0.00 0.00 4.06
304 305 2.733227 GCTCTTTGTCGGCCATTTCATG 60.733 50.000 2.24 0.00 0.00 3.07
305 306 1.474077 GCTCTTTGTCGGCCATTTCAT 59.526 47.619 2.24 0.00 0.00 2.57
306 307 0.881118 GCTCTTTGTCGGCCATTTCA 59.119 50.000 2.24 0.00 0.00 2.69
307 308 0.881118 TGCTCTTTGTCGGCCATTTC 59.119 50.000 2.24 0.00 0.00 2.17
308 309 1.474077 GATGCTCTTTGTCGGCCATTT 59.526 47.619 2.24 0.00 0.00 2.32
309 310 1.098050 GATGCTCTTTGTCGGCCATT 58.902 50.000 2.24 0.00 0.00 3.16
310 311 0.035152 TGATGCTCTTTGTCGGCCAT 60.035 50.000 2.24 0.00 0.00 4.40
311 312 0.035152 ATGATGCTCTTTGTCGGCCA 60.035 50.000 2.24 0.00 0.00 5.36
312 313 0.379669 CATGATGCTCTTTGTCGGCC 59.620 55.000 0.00 0.00 0.00 6.13
313 314 1.372582 TCATGATGCTCTTTGTCGGC 58.627 50.000 0.00 0.00 0.00 5.54
314 315 4.142534 ACAAATCATGATGCTCTTTGTCGG 60.143 41.667 15.39 0.00 35.70 4.79
315 316 4.978186 ACAAATCATGATGCTCTTTGTCG 58.022 39.130 15.39 0.00 35.70 4.35
316 317 7.478322 ACATACAAATCATGATGCTCTTTGTC 58.522 34.615 21.60 0.00 39.81 3.18
317 318 7.400599 ACATACAAATCATGATGCTCTTTGT 57.599 32.000 21.65 21.65 41.46 2.83
318 319 8.592155 CAAACATACAAATCATGATGCTCTTTG 58.408 33.333 9.46 12.50 33.98 2.77
319 320 8.525316 TCAAACATACAAATCATGATGCTCTTT 58.475 29.630 9.46 0.00 0.00 2.52
320 321 8.058667 TCAAACATACAAATCATGATGCTCTT 57.941 30.769 9.46 0.00 0.00 2.85
321 322 7.634671 TCAAACATACAAATCATGATGCTCT 57.365 32.000 9.46 0.00 0.00 4.09
322 323 8.282124 CATCAAACATACAAATCATGATGCTC 57.718 34.615 9.46 0.00 37.12 4.26
325 326 7.704899 ACAGCATCAAACATACAAATCATGATG 59.295 33.333 9.46 1.33 43.30 3.07
326 327 7.778083 ACAGCATCAAACATACAAATCATGAT 58.222 30.769 1.18 1.18 0.00 2.45
327 328 7.160547 ACAGCATCAAACATACAAATCATGA 57.839 32.000 0.00 0.00 0.00 3.07
328 329 9.524106 AATACAGCATCAAACATACAAATCATG 57.476 29.630 0.00 0.00 0.00 3.07
329 330 9.524106 CAATACAGCATCAAACATACAAATCAT 57.476 29.630 0.00 0.00 0.00 2.45
330 331 8.522003 ACAATACAGCATCAAACATACAAATCA 58.478 29.630 0.00 0.00 0.00 2.57
331 332 8.915871 ACAATACAGCATCAAACATACAAATC 57.084 30.769 0.00 0.00 0.00 2.17
332 333 9.142515 CAACAATACAGCATCAAACATACAAAT 57.857 29.630 0.00 0.00 0.00 2.32
333 334 8.355913 TCAACAATACAGCATCAAACATACAAA 58.644 29.630 0.00 0.00 0.00 2.83
334 335 7.880105 TCAACAATACAGCATCAAACATACAA 58.120 30.769 0.00 0.00 0.00 2.41
335 336 7.446001 TCAACAATACAGCATCAAACATACA 57.554 32.000 0.00 0.00 0.00 2.29
336 337 8.023128 AGTTCAACAATACAGCATCAAACATAC 58.977 33.333 0.00 0.00 0.00 2.39
337 338 8.109705 AGTTCAACAATACAGCATCAAACATA 57.890 30.769 0.00 0.00 0.00 2.29
338 339 6.985117 AGTTCAACAATACAGCATCAAACAT 58.015 32.000 0.00 0.00 0.00 2.71
339 340 6.389830 AGTTCAACAATACAGCATCAAACA 57.610 33.333 0.00 0.00 0.00 2.83
340 341 8.970691 AATAGTTCAACAATACAGCATCAAAC 57.029 30.769 0.00 0.00 0.00 2.93
341 342 9.409312 CAAATAGTTCAACAATACAGCATCAAA 57.591 29.630 0.00 0.00 0.00 2.69
342 343 8.575589 ACAAATAGTTCAACAATACAGCATCAA 58.424 29.630 0.00 0.00 0.00 2.57
343 344 8.109705 ACAAATAGTTCAACAATACAGCATCA 57.890 30.769 0.00 0.00 0.00 3.07
344 345 8.970691 AACAAATAGTTCAACAATACAGCATC 57.029 30.769 0.00 0.00 34.74 3.91
359 360 9.769093 GTTTATCGTGCAATAGAACAAATAGTT 57.231 29.630 0.00 0.00 44.93 2.24
360 361 9.162764 AGTTTATCGTGCAATAGAACAAATAGT 57.837 29.630 0.00 0.00 0.00 2.12
366 367 9.811995 ACTAATAGTTTATCGTGCAATAGAACA 57.188 29.630 0.00 0.00 0.00 3.18
423 424 9.842444 CGACGAAAAACAAAATAAATCAACAAT 57.158 25.926 0.00 0.00 0.00 2.71
424 425 7.841758 GCGACGAAAAACAAAATAAATCAACAA 59.158 29.630 0.00 0.00 0.00 2.83
425 426 7.331055 GCGACGAAAAACAAAATAAATCAACA 58.669 30.769 0.00 0.00 0.00 3.33
426 427 6.783759 GGCGACGAAAAACAAAATAAATCAAC 59.216 34.615 0.00 0.00 0.00 3.18
427 428 6.074249 GGGCGACGAAAAACAAAATAAATCAA 60.074 34.615 0.00 0.00 0.00 2.57
428 429 5.402867 GGGCGACGAAAAACAAAATAAATCA 59.597 36.000 0.00 0.00 0.00 2.57
429 430 5.402867 TGGGCGACGAAAAACAAAATAAATC 59.597 36.000 0.00 0.00 0.00 2.17
430 431 5.290386 TGGGCGACGAAAAACAAAATAAAT 58.710 33.333 0.00 0.00 0.00 1.40
431 432 4.679662 TGGGCGACGAAAAACAAAATAAA 58.320 34.783 0.00 0.00 0.00 1.40
432 433 4.303086 TGGGCGACGAAAAACAAAATAA 57.697 36.364 0.00 0.00 0.00 1.40
433 434 3.984508 TGGGCGACGAAAAACAAAATA 57.015 38.095 0.00 0.00 0.00 1.40
434 435 2.873133 TGGGCGACGAAAAACAAAAT 57.127 40.000 0.00 0.00 0.00 1.82
435 436 2.649331 TTGGGCGACGAAAAACAAAA 57.351 40.000 0.00 0.00 0.00 2.44
436 437 2.649331 TTTGGGCGACGAAAAACAAA 57.351 40.000 0.00 0.00 34.94 2.83
437 438 2.649331 TTTTGGGCGACGAAAAACAA 57.351 40.000 8.90 0.00 43.69 2.83
441 442 2.943449 AAGTTTTTGGGCGACGAAAA 57.057 40.000 7.13 7.13 44.73 2.29
442 443 2.944349 AGTAAGTTTTTGGGCGACGAAA 59.056 40.909 0.00 0.00 36.16 3.46
443 444 2.563702 AGTAAGTTTTTGGGCGACGAA 58.436 42.857 0.00 0.00 0.00 3.85
444 445 2.243602 AGTAAGTTTTTGGGCGACGA 57.756 45.000 0.00 0.00 0.00 4.20
445 446 3.680937 TGATAGTAAGTTTTTGGGCGACG 59.319 43.478 0.00 0.00 0.00 5.12
446 447 5.049267 TGTTGATAGTAAGTTTTTGGGCGAC 60.049 40.000 0.00 0.00 0.00 5.19
447 448 5.049267 GTGTTGATAGTAAGTTTTTGGGCGA 60.049 40.000 0.00 0.00 0.00 5.54
448 449 5.151389 GTGTTGATAGTAAGTTTTTGGGCG 58.849 41.667 0.00 0.00 0.00 6.13
449 450 5.151389 CGTGTTGATAGTAAGTTTTTGGGC 58.849 41.667 0.00 0.00 0.00 5.36
450 451 5.048991 AGCGTGTTGATAGTAAGTTTTTGGG 60.049 40.000 0.00 0.00 0.00 4.12
451 452 5.997385 AGCGTGTTGATAGTAAGTTTTTGG 58.003 37.500 0.00 0.00 0.00 3.28
452 453 7.569297 TGTAGCGTGTTGATAGTAAGTTTTTG 58.431 34.615 0.00 0.00 0.00 2.44
453 454 7.718272 TGTAGCGTGTTGATAGTAAGTTTTT 57.282 32.000 0.00 0.00 0.00 1.94
454 455 7.718272 TTGTAGCGTGTTGATAGTAAGTTTT 57.282 32.000 0.00 0.00 0.00 2.43
455 456 7.568134 CGTTTGTAGCGTGTTGATAGTAAGTTT 60.568 37.037 0.00 0.00 0.00 2.66
456 457 6.129009 CGTTTGTAGCGTGTTGATAGTAAGTT 60.129 38.462 0.00 0.00 0.00 2.66
457 458 5.344128 CGTTTGTAGCGTGTTGATAGTAAGT 59.656 40.000 0.00 0.00 0.00 2.24
458 459 5.344128 ACGTTTGTAGCGTGTTGATAGTAAG 59.656 40.000 0.00 0.00 41.33 2.34
459 460 5.221880 ACGTTTGTAGCGTGTTGATAGTAA 58.778 37.500 0.00 0.00 41.33 2.24
460 461 4.797471 ACGTTTGTAGCGTGTTGATAGTA 58.203 39.130 0.00 0.00 41.33 1.82
461 462 3.645884 ACGTTTGTAGCGTGTTGATAGT 58.354 40.909 0.00 0.00 41.33 2.12
462 463 4.640805 AACGTTTGTAGCGTGTTGATAG 57.359 40.909 0.00 0.00 42.10 2.08
463 464 5.406767 AAAACGTTTGTAGCGTGTTGATA 57.593 34.783 15.46 0.00 42.10 2.15
464 465 3.955771 AAACGTTTGTAGCGTGTTGAT 57.044 38.095 13.81 0.00 42.10 2.57
465 466 3.743567 AAAACGTTTGTAGCGTGTTGA 57.256 38.095 15.46 0.00 42.10 3.18
483 484 2.572243 CAACACGCGGCGTATTAAAAA 58.428 42.857 28.93 0.00 38.32 1.94
484 485 1.725292 GCAACACGCGGCGTATTAAAA 60.725 47.619 28.93 0.00 38.32 1.52
485 486 0.179220 GCAACACGCGGCGTATTAAA 60.179 50.000 28.93 0.00 38.32 1.52
486 487 1.420702 GCAACACGCGGCGTATTAA 59.579 52.632 28.93 0.00 38.32 1.40
487 488 2.454464 GGCAACACGCGGCGTATTA 61.454 57.895 28.93 0.00 43.84 0.98
488 489 3.795342 GGCAACACGCGGCGTATT 61.795 61.111 28.93 21.60 43.84 1.89
497 498 4.326766 CAACAGCCGGGCAACACG 62.327 66.667 23.09 6.33 39.74 4.49
498 499 2.406452 CTTCAACAGCCGGGCAACAC 62.406 60.000 23.09 0.00 39.74 3.32
499 500 2.124109 TTCAACAGCCGGGCAACA 60.124 55.556 23.09 0.00 39.74 3.33
500 501 1.244019 ATCTTCAACAGCCGGGCAAC 61.244 55.000 23.09 0.00 0.00 4.17
501 502 1.074775 ATCTTCAACAGCCGGGCAA 59.925 52.632 23.09 5.10 0.00 4.52
502 503 1.675310 CATCTTCAACAGCCGGGCA 60.675 57.895 23.09 0.00 0.00 5.36
503 504 3.056313 GCATCTTCAACAGCCGGGC 62.056 63.158 12.11 12.11 0.00 6.13
504 505 1.372087 GAGCATCTTCAACAGCCGGG 61.372 60.000 2.18 0.00 0.00 5.73
505 506 2.093216 GAGCATCTTCAACAGCCGG 58.907 57.895 0.00 0.00 0.00 6.13
517 518 5.049818 CCTCGATTTCCACATTAAGAGCATC 60.050 44.000 0.00 0.00 0.00 3.91
518 519 4.818546 CCTCGATTTCCACATTAAGAGCAT 59.181 41.667 0.00 0.00 0.00 3.79
519 520 4.191544 CCTCGATTTCCACATTAAGAGCA 58.808 43.478 0.00 0.00 0.00 4.26
520 521 3.002759 GCCTCGATTTCCACATTAAGAGC 59.997 47.826 0.00 0.00 0.00 4.09
521 522 3.561725 GGCCTCGATTTCCACATTAAGAG 59.438 47.826 0.00 0.00 0.00 2.85
522 523 3.541632 GGCCTCGATTTCCACATTAAGA 58.458 45.455 0.00 0.00 0.00 2.10
523 524 2.618709 GGGCCTCGATTTCCACATTAAG 59.381 50.000 0.84 0.00 0.00 1.85
524 525 2.650322 GGGCCTCGATTTCCACATTAA 58.350 47.619 0.84 0.00 0.00 1.40
571 573 3.961729 GGAACTTTCCACGGGTCG 58.038 61.111 2.93 0.00 46.76 4.79
704 1752 0.452184 GATCTCGCGGTCAAGACTGA 59.548 55.000 13.01 2.42 40.06 3.41
705 1753 0.171231 TGATCTCGCGGTCAAGACTG 59.829 55.000 6.13 4.67 40.59 3.51
738 1786 2.225963 CGTAATACGTGGGCTCTCTAGG 59.774 54.545 4.41 0.00 36.74 3.02
1152 2207 0.324738 TCCAGGAGACGATCTTGCCT 60.325 55.000 0.00 0.00 33.74 4.75
1221 2276 0.827925 TGTCTGCCTTGTCGGACTCT 60.828 55.000 9.88 0.00 41.67 3.24
1394 2449 2.754375 GAGGGGTTTCTTCGCCCA 59.246 61.111 0.00 0.00 46.59 5.36
1702 2775 3.076092 AGGCACTGGAGGAAGCAG 58.924 61.111 0.00 0.00 37.18 4.24
1857 2930 2.093306 TGTCGAAGGTTCATCGCAAT 57.907 45.000 0.00 0.00 40.04 3.56
1926 2999 6.519353 TTAATCAAACTGTCACTACACACG 57.481 37.500 0.00 0.00 0.00 4.49
1978 3051 5.580297 CACCAGCAACAATGTTTTTGTAACT 59.420 36.000 0.00 0.00 31.50 2.24
2113 3186 1.980052 CGTAAGAAGGCCACCCTCA 59.020 57.895 5.01 0.00 41.90 3.86
2134 3207 5.661458 ACCTTATCAACATCCTCTAACACG 58.339 41.667 0.00 0.00 0.00 4.49
2167 3240 8.140628 TCTTAATAGAGAAGACAGCTATTGCAG 58.859 37.037 1.12 0.00 42.74 4.41
2196 3269 3.825308 ACTCACATGCTAAAATGTTGCG 58.175 40.909 0.00 0.00 38.75 4.85
2276 3361 0.968405 GGGCTCTCCATTTTTGTGCA 59.032 50.000 0.00 0.00 35.00 4.57
2279 3364 1.203100 AGCAGGGCTCTCCATTTTTGT 60.203 47.619 0.00 0.00 30.62 2.83
2309 3394 0.601311 GTTGGAGCTGCTTCAGACGT 60.601 55.000 11.06 0.00 32.44 4.34
2313 3398 1.321474 TTTGGTTGGAGCTGCTTCAG 58.679 50.000 11.06 0.00 34.12 3.02
2376 3461 2.024414 AGCACAGTTCCAGTGAAAACC 58.976 47.619 0.00 0.00 39.30 3.27
2377 3462 3.782889 AAGCACAGTTCCAGTGAAAAC 57.217 42.857 0.00 0.00 39.30 2.43
2459 3546 4.202090 GGAAGGATTGCATCAAATCTGTCC 60.202 45.833 0.00 0.00 35.98 4.02
2521 3608 8.356533 CAATTCTATTTGCATTTCATACCCAC 57.643 34.615 0.00 0.00 0.00 4.61
2567 3654 8.302515 ACAAATATTTAGGAACGGAGAGAGTA 57.697 34.615 0.00 0.00 0.00 2.59
2568 3655 7.124448 AGACAAATATTTAGGAACGGAGAGAGT 59.876 37.037 0.00 0.00 0.00 3.24
2569 3656 7.493367 AGACAAATATTTAGGAACGGAGAGAG 58.507 38.462 0.00 0.00 0.00 3.20
2570 3657 7.419711 AGACAAATATTTAGGAACGGAGAGA 57.580 36.000 0.00 0.00 0.00 3.10
2571 3658 8.494016 AAAGACAAATATTTAGGAACGGAGAG 57.506 34.615 0.00 0.00 0.00 3.20
2572 3659 8.319146 AGAAAGACAAATATTTAGGAACGGAGA 58.681 33.333 0.00 0.00 0.00 3.71
2573 3660 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
2574 3661 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
2575 3662 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
2588 3675 9.396022 ACTTGTTGAAATCTCTAGAAAGACAAA 57.604 29.630 0.00 0.00 0.00 2.83
2589 3676 8.830580 CACTTGTTGAAATCTCTAGAAAGACAA 58.169 33.333 0.00 0.00 0.00 3.18
2590 3677 8.204160 TCACTTGTTGAAATCTCTAGAAAGACA 58.796 33.333 0.00 0.00 0.00 3.41
2591 3678 8.491950 GTCACTTGTTGAAATCTCTAGAAAGAC 58.508 37.037 0.00 0.00 35.39 3.01
2592 3679 8.424918 AGTCACTTGTTGAAATCTCTAGAAAGA 58.575 33.333 0.00 0.00 35.39 2.52
2593 3680 8.600449 AGTCACTTGTTGAAATCTCTAGAAAG 57.400 34.615 0.00 0.00 35.39 2.62
2594 3681 9.477484 GTAGTCACTTGTTGAAATCTCTAGAAA 57.523 33.333 0.00 0.00 35.39 2.52
2595 3682 8.638873 TGTAGTCACTTGTTGAAATCTCTAGAA 58.361 33.333 0.00 0.00 35.39 2.10
2596 3683 8.178313 TGTAGTCACTTGTTGAAATCTCTAGA 57.822 34.615 0.00 0.00 35.39 2.43
2597 3684 8.994429 ATGTAGTCACTTGTTGAAATCTCTAG 57.006 34.615 0.00 0.00 35.39 2.43
2598 3685 9.856488 GTATGTAGTCACTTGTTGAAATCTCTA 57.144 33.333 0.00 0.00 35.39 2.43
2599 3686 7.542477 CGTATGTAGTCACTTGTTGAAATCTCT 59.458 37.037 0.00 0.00 35.39 3.10
2600 3687 7.541091 TCGTATGTAGTCACTTGTTGAAATCTC 59.459 37.037 0.00 0.00 35.39 2.75
2601 3688 7.375834 TCGTATGTAGTCACTTGTTGAAATCT 58.624 34.615 0.00 0.00 35.39 2.40
2602 3689 7.576750 TCGTATGTAGTCACTTGTTGAAATC 57.423 36.000 0.00 0.00 35.39 2.17
2603 3690 7.360101 GCTTCGTATGTAGTCACTTGTTGAAAT 60.360 37.037 0.00 0.00 35.39 2.17
2604 3691 6.073980 GCTTCGTATGTAGTCACTTGTTGAAA 60.074 38.462 0.00 0.00 35.39 2.69
2605 3692 5.404366 GCTTCGTATGTAGTCACTTGTTGAA 59.596 40.000 0.00 0.00 35.39 2.69
2606 3693 4.921515 GCTTCGTATGTAGTCACTTGTTGA 59.078 41.667 0.00 0.00 0.00 3.18
2607 3694 4.684242 TGCTTCGTATGTAGTCACTTGTTG 59.316 41.667 0.00 0.00 0.00 3.33
2608 3695 4.878439 TGCTTCGTATGTAGTCACTTGTT 58.122 39.130 0.00 0.00 0.00 2.83
2609 3696 4.514781 TGCTTCGTATGTAGTCACTTGT 57.485 40.909 0.00 0.00 0.00 3.16
2610 3697 5.839262 TTTGCTTCGTATGTAGTCACTTG 57.161 39.130 0.00 0.00 0.00 3.16
2611 3698 6.649141 TCATTTTGCTTCGTATGTAGTCACTT 59.351 34.615 0.00 0.00 0.00 3.16
2612 3699 6.163476 TCATTTTGCTTCGTATGTAGTCACT 58.837 36.000 0.00 0.00 0.00 3.41
2613 3700 6.090898 ACTCATTTTGCTTCGTATGTAGTCAC 59.909 38.462 0.00 0.00 0.00 3.67
2614 3701 6.090763 CACTCATTTTGCTTCGTATGTAGTCA 59.909 38.462 0.00 0.00 0.00 3.41
2615 3702 6.310467 TCACTCATTTTGCTTCGTATGTAGTC 59.690 38.462 0.00 0.00 0.00 2.59
2616 3703 6.163476 TCACTCATTTTGCTTCGTATGTAGT 58.837 36.000 0.00 0.00 0.00 2.73
2617 3704 6.647212 TCACTCATTTTGCTTCGTATGTAG 57.353 37.500 0.00 0.00 0.00 2.74
2618 3705 7.549134 AGATTCACTCATTTTGCTTCGTATGTA 59.451 33.333 0.00 0.00 0.00 2.29
2619 3706 5.940192 TTCACTCATTTTGCTTCGTATGT 57.060 34.783 0.00 0.00 0.00 2.29
2620 3707 6.779117 AGATTCACTCATTTTGCTTCGTATG 58.221 36.000 0.00 0.00 0.00 2.39
2621 3708 6.992063 AGATTCACTCATTTTGCTTCGTAT 57.008 33.333 0.00 0.00 0.00 3.06
2622 3709 6.871492 TGTAGATTCACTCATTTTGCTTCGTA 59.129 34.615 0.00 0.00 0.00 3.43
2623 3710 5.700832 TGTAGATTCACTCATTTTGCTTCGT 59.299 36.000 0.00 0.00 0.00 3.85
2624 3711 6.017933 GTGTAGATTCACTCATTTTGCTTCG 58.982 40.000 0.00 0.00 35.68 3.79
2625 3712 7.138692 AGTGTAGATTCACTCATTTTGCTTC 57.861 36.000 0.00 0.00 44.07 3.86
2655 3742 9.642343 ACCACATACGGATGTATATAGACATAT 57.358 33.333 14.23 5.08 44.82 1.78
2657 3744 7.956328 ACCACATACGGATGTATATAGACAT 57.044 36.000 14.23 12.70 44.82 3.06
2658 3745 8.105197 ACTACCACATACGGATGTATATAGACA 58.895 37.037 22.62 2.07 44.82 3.41
2659 3746 8.503458 ACTACCACATACGGATGTATATAGAC 57.497 38.462 22.62 0.00 44.82 2.59
2660 3747 8.546322 AGACTACCACATACGGATGTATATAGA 58.454 37.037 22.62 5.04 44.82 1.98
2661 3748 8.734218 AGACTACCACATACGGATGTATATAG 57.266 38.462 14.23 16.35 44.82 1.31
2663 3750 9.696572 AATAGACTACCACATACGGATGTATAT 57.303 33.333 14.23 4.37 44.82 0.86
2664 3751 9.524496 AAATAGACTACCACATACGGATGTATA 57.476 33.333 14.23 8.27 44.82 1.47
2665 3752 8.304596 CAAATAGACTACCACATACGGATGTAT 58.695 37.037 14.23 7.46 44.82 2.29
2666 3753 7.503230 TCAAATAGACTACCACATACGGATGTA 59.497 37.037 14.23 0.00 44.82 2.29
2668 3755 6.745116 TCAAATAGACTACCACATACGGATG 58.255 40.000 5.94 5.94 39.16 3.51
2669 3756 6.971726 TCAAATAGACTACCACATACGGAT 57.028 37.500 0.00 0.00 0.00 4.18
2670 3757 6.778834 TTCAAATAGACTACCACATACGGA 57.221 37.500 0.00 0.00 0.00 4.69
2671 3758 7.926555 AGATTTCAAATAGACTACCACATACGG 59.073 37.037 0.00 0.00 0.00 4.02
2672 3759 8.873215 AGATTTCAAATAGACTACCACATACG 57.127 34.615 0.00 0.00 0.00 3.06
2700 3787 8.520351 CCTCCGTTCCTAAATATTTGTCTTTTT 58.480 33.333 11.05 0.00 0.00 1.94
2701 3788 7.122204 CCCTCCGTTCCTAAATATTTGTCTTTT 59.878 37.037 11.05 0.00 0.00 2.27
2702 3789 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
2703 3790 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
2704 3791 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
2705 3792 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
2706 3793 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
2707 3794 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
2708 3795 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
2709 3796 6.384886 TGTTACTCCCTCCGTTCCTAAATATT 59.615 38.462 0.00 0.00 0.00 1.28
2710 3797 5.901276 TGTTACTCCCTCCGTTCCTAAATAT 59.099 40.000 0.00 0.00 0.00 1.28
2711 3798 5.271598 TGTTACTCCCTCCGTTCCTAAATA 58.728 41.667 0.00 0.00 0.00 1.40
2712 3799 4.098894 TGTTACTCCCTCCGTTCCTAAAT 58.901 43.478 0.00 0.00 0.00 1.40
2713 3800 3.509442 TGTTACTCCCTCCGTTCCTAAA 58.491 45.455 0.00 0.00 0.00 1.85
2714 3801 3.173953 TGTTACTCCCTCCGTTCCTAA 57.826 47.619 0.00 0.00 0.00 2.69
2715 3802 2.905415 TGTTACTCCCTCCGTTCCTA 57.095 50.000 0.00 0.00 0.00 2.94
2716 3803 2.019807 TTGTTACTCCCTCCGTTCCT 57.980 50.000 0.00 0.00 0.00 3.36
2717 3804 3.345508 AATTGTTACTCCCTCCGTTCC 57.654 47.619 0.00 0.00 0.00 3.62
2718 3805 5.727434 TCTTAATTGTTACTCCCTCCGTTC 58.273 41.667 0.00 0.00 0.00 3.95
2719 3806 5.750352 TCTTAATTGTTACTCCCTCCGTT 57.250 39.130 0.00 0.00 0.00 4.44
2720 3807 5.485620 GTTCTTAATTGTTACTCCCTCCGT 58.514 41.667 0.00 0.00 0.00 4.69
2721 3808 4.874396 GGTTCTTAATTGTTACTCCCTCCG 59.126 45.833 0.00 0.00 0.00 4.63
2722 3809 5.646793 GTGGTTCTTAATTGTTACTCCCTCC 59.353 44.000 0.00 0.00 0.00 4.30
2723 3810 6.371825 CAGTGGTTCTTAATTGTTACTCCCTC 59.628 42.308 0.00 0.00 0.00 4.30
2724 3811 6.043938 TCAGTGGTTCTTAATTGTTACTCCCT 59.956 38.462 0.00 0.00 0.00 4.20
2725 3812 6.235664 TCAGTGGTTCTTAATTGTTACTCCC 58.764 40.000 0.00 0.00 0.00 4.30
2726 3813 7.739498 TTCAGTGGTTCTTAATTGTTACTCC 57.261 36.000 0.00 0.00 0.00 3.85
2727 3814 8.784043 ACATTCAGTGGTTCTTAATTGTTACTC 58.216 33.333 0.00 0.00 0.00 2.59
2759 3846 3.164269 ATAGCCCCCTGCACCGAG 61.164 66.667 0.00 0.00 44.83 4.63
2760 3847 3.161450 GATAGCCCCCTGCACCGA 61.161 66.667 0.00 0.00 44.83 4.69
2761 3848 2.822637 ATGATAGCCCCCTGCACCG 61.823 63.158 0.00 0.00 44.83 4.94
2762 3849 1.228367 CATGATAGCCCCCTGCACC 60.228 63.158 0.00 0.00 44.83 5.01
2843 3931 4.935352 AAGCAAACTAACCAGCATTTCA 57.065 36.364 0.00 0.00 0.00 2.69
2880 3968 8.206867 TGCTAAACAGTCAGCTTTGATATATCT 58.793 33.333 13.79 0.00 38.63 1.98
3024 4278 5.156355 CAAGTTTGCATGCTTATCGTTCTT 58.844 37.500 20.33 8.94 0.00 2.52
3027 4281 3.255642 ACCAAGTTTGCATGCTTATCGTT 59.744 39.130 20.33 2.12 0.00 3.85
3028 4282 2.819608 ACCAAGTTTGCATGCTTATCGT 59.180 40.909 20.33 3.55 0.00 3.73
3104 7893 3.931907 ACATCCTGCAGCCATACTTAA 57.068 42.857 8.66 0.00 0.00 1.85
3282 8139 6.171921 CAGTCTGAAAAGAATCAGGAGACAT 58.828 40.000 0.00 0.00 45.55 3.06
3299 8156 5.984695 AGCACTTAGAATGTACAGTCTGA 57.015 39.130 30.63 23.28 36.34 3.27
3363 8220 8.049655 TGCATGTTATAATACTTTGAAGCACA 57.950 30.769 0.00 0.00 0.00 4.57
3366 8223 7.377928 CAGCTGCATGTTATAATACTTTGAAGC 59.622 37.037 0.00 6.28 35.50 3.86
3372 8229 9.046296 GTCTAACAGCTGCATGTTATAATACTT 57.954 33.333 15.27 0.00 42.97 2.24
3381 8238 2.867109 AGGTCTAACAGCTGCATGTT 57.133 45.000 15.27 17.22 45.19 2.71
3410 8268 5.830912 TCAAAAATCATGGTGTCACAACTC 58.169 37.500 5.12 0.00 0.00 3.01
3416 8274 5.534278 TGCTACTTCAAAAATCATGGTGTCA 59.466 36.000 0.00 0.00 0.00 3.58
3417 8275 6.012658 TGCTACTTCAAAAATCATGGTGTC 57.987 37.500 0.00 0.00 0.00 3.67
3424 8282 9.206870 GATGGAATTTTGCTACTTCAAAAATCA 57.793 29.630 14.85 9.98 45.50 2.57
3426 8284 8.087750 TCGATGGAATTTTGCTACTTCAAAAAT 58.912 29.630 5.87 0.00 45.50 1.82
3429 8287 6.567687 TCGATGGAATTTTGCTACTTCAAA 57.432 33.333 0.00 0.00 34.47 2.69
3431 8289 6.567687 TTTCGATGGAATTTTGCTACTTCA 57.432 33.333 0.00 0.00 30.88 3.02
3435 8293 5.101628 TGCATTTCGATGGAATTTTGCTAC 58.898 37.500 16.04 0.00 35.57 3.58
3438 8296 3.242188 GCTGCATTTCGATGGAATTTTGC 60.242 43.478 11.22 11.22 35.33 3.68
3445 8303 1.944709 CATGAGCTGCATTTCGATGGA 59.055 47.619 1.02 0.00 34.15 3.41
3447 8305 3.254827 CTCATGAGCTGCATTTCGATG 57.745 47.619 10.38 0.00 34.15 3.84
3487 8345 4.518970 GCAGTAACATTGACCTGAAAAGGA 59.481 41.667 0.00 0.00 0.00 3.36
3681 8539 5.440234 TCTACATTTTTAACGCCTTTGCA 57.560 34.783 0.00 0.00 37.32 4.08
3684 8542 7.094118 TGGCTATTCTACATTTTTAACGCCTTT 60.094 33.333 0.00 0.00 33.99 3.11
3837 8695 4.295051 GCCACGAGCAATCTTTGTTTTTA 58.705 39.130 0.00 0.00 42.97 1.52
3854 8712 1.721664 CCAGCATCATCCAAGCCACG 61.722 60.000 0.00 0.00 0.00 4.94
3875 8757 2.095718 GCTTAACCTTGACTTCTTGCCG 60.096 50.000 0.00 0.00 0.00 5.69
3876 8758 2.884639 TGCTTAACCTTGACTTCTTGCC 59.115 45.455 0.00 0.00 0.00 4.52
3945 8846 8.945758 CGAGAGCTTATAAATCATCATTTTGG 57.054 34.615 0.00 0.00 33.95 3.28
3965 8867 0.671781 CCCCTTCTTGTGTGCGAGAG 60.672 60.000 0.00 0.00 36.56 3.20
3966 8868 1.371183 CCCCTTCTTGTGTGCGAGA 59.629 57.895 0.00 0.00 33.47 4.04
4008 8912 0.460311 GCTCCCGCTAGCTTCTGTAA 59.540 55.000 13.93 0.00 39.50 2.41
4053 8957 3.317993 CCCAAACTGAAACCTACCTTGTG 59.682 47.826 0.00 0.00 0.00 3.33
4061 8965 0.190815 ATGCCCCCAAACTGAAACCT 59.809 50.000 0.00 0.00 0.00 3.50
4335 9243 2.810650 CTCCAGATGCAAGGTACGTAC 58.189 52.381 17.56 17.56 0.00 3.67
4434 9348 1.257743 TACTCTGTGTCTCCTGTGCC 58.742 55.000 0.00 0.00 0.00 5.01
4532 9455 2.498726 CGAGGAAGAGCAGCCCTC 59.501 66.667 5.55 5.55 42.24 4.30
4533 9456 3.080121 CCGAGGAAGAGCAGCCCT 61.080 66.667 0.00 0.00 0.00 5.19
4574 9500 0.901580 ACCCGAAGCTTTCTCCGGTA 60.902 55.000 19.42 0.00 40.30 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.