Multiple sequence alignment - TraesCS5D01G209800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G209800 chr5D 100.000 2848 0 0 1 2848 317816503 317813656 0.000000e+00 5260.0
1 TraesCS5D01G209800 chr5D 97.092 447 13 0 2402 2848 175819712 175820158 0.000000e+00 754.0
2 TraesCS5D01G209800 chr5D 97.297 444 12 0 2405 2848 183659423 183658980 0.000000e+00 754.0
3 TraesCS5D01G209800 chr5D 89.552 201 12 7 1601 1795 317815007 317814810 2.190000e-61 246.0
4 TraesCS5D01G209800 chr5A 94.393 1730 69 15 30 1744 613003287 613001571 0.000000e+00 2632.0
5 TraesCS5D01G209800 chr5A 95.418 873 32 7 1537 2404 613001831 613000962 0.000000e+00 1384.0
6 TraesCS5D01G209800 chr5A 87.060 1221 138 15 476 1690 395491174 395489968 0.000000e+00 1362.0
7 TraesCS5D01G209800 chr5A 85.543 1252 139 23 500 1744 509879801 509878585 0.000000e+00 1271.0
8 TraesCS5D01G209800 chr5A 88.060 871 74 13 1538 2404 509878837 509877993 0.000000e+00 1005.0
9 TraesCS5D01G209800 chr5A 89.189 814 62 21 1597 2404 395490164 395489371 0.000000e+00 992.0
10 TraesCS5D01G209800 chr5A 91.943 211 13 4 1486 1694 613001779 613001571 2.780000e-75 292.0
11 TraesCS5D01G209800 chr7B 85.304 1252 142 23 500 1744 581500454 581499238 0.000000e+00 1254.0
12 TraesCS5D01G209800 chr7B 88.060 871 74 13 1538 2404 581499490 581498646 0.000000e+00 1005.0
13 TraesCS5D01G209800 chr7A 84.996 1253 144 25 500 1744 166603372 166602156 0.000000e+00 1232.0
14 TraesCS5D01G209800 chr5B 84.155 1237 156 22 478 1708 29220618 29219416 0.000000e+00 1162.0
15 TraesCS5D01G209800 chr6B 85.415 1145 129 20 500 1639 106527804 106528915 0.000000e+00 1155.0
16 TraesCS5D01G209800 chr6B 84.532 1196 145 24 500 1690 46843305 46842145 0.000000e+00 1147.0
17 TraesCS5D01G209800 chr6B 89.179 767 57 10 1642 2404 106528767 106529511 0.000000e+00 933.0
18 TraesCS5D01G209800 chr3B 87.448 964 116 5 500 1460 464197158 464198119 0.000000e+00 1105.0
19 TraesCS5D01G209800 chr4B 88.768 917 74 14 1494 2404 653617827 653616934 0.000000e+00 1096.0
20 TraesCS5D01G209800 chr4B 84.395 769 82 25 1037 1797 653618366 653617628 0.000000e+00 721.0
21 TraesCS5D01G209800 chr1A 89.498 876 72 16 1540 2404 579878433 579877567 0.000000e+00 1090.0
22 TraesCS5D01G209800 chr1A 84.170 259 25 14 1489 1740 579878433 579878184 1.320000e-58 237.0
23 TraesCS5D01G209800 chr2B 88.350 824 76 15 1595 2404 767703741 767704558 0.000000e+00 972.0
24 TraesCS5D01G209800 chrUn 88.589 815 64 13 1594 2404 34309953 34310742 0.000000e+00 963.0
25 TraesCS5D01G209800 chr3D 97.079 445 13 0 2404 2848 151457324 151457768 0.000000e+00 750.0
26 TraesCS5D01G209800 chr3D 96.854 445 14 0 2404 2848 65334540 65334984 0.000000e+00 745.0
27 TraesCS5D01G209800 chr1D 97.072 444 13 0 2405 2848 95209919 95210362 0.000000e+00 749.0
28 TraesCS5D01G209800 chr1D 96.854 445 14 0 2404 2848 355578100 355578544 0.000000e+00 745.0
29 TraesCS5D01G209800 chr1D 96.652 448 14 1 2401 2848 32844999 32845445 0.000000e+00 743.0
30 TraesCS5D01G209800 chr1D 89.007 564 46 14 1540 2094 483210969 483210413 0.000000e+00 684.0
31 TraesCS5D01G209800 chr7D 96.659 449 13 2 2401 2848 230274623 230274176 0.000000e+00 745.0
32 TraesCS5D01G209800 chr7D 96.854 445 14 0 2404 2848 413552239 413552683 0.000000e+00 745.0
33 TraesCS5D01G209800 chr3A 95.349 43 1 1 119 161 543023860 543023901 1.830000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G209800 chr5D 317813656 317816503 2847 True 2753.0 5260 94.7760 1 2848 2 chr5D.!!$R2 2847
1 TraesCS5D01G209800 chr5A 613000962 613003287 2325 True 1436.0 2632 93.9180 30 2404 3 chr5A.!!$R3 2374
2 TraesCS5D01G209800 chr5A 395489371 395491174 1803 True 1177.0 1362 88.1245 476 2404 2 chr5A.!!$R1 1928
3 TraesCS5D01G209800 chr5A 509877993 509879801 1808 True 1138.0 1271 86.8015 500 2404 2 chr5A.!!$R2 1904
4 TraesCS5D01G209800 chr7B 581498646 581500454 1808 True 1129.5 1254 86.6820 500 2404 2 chr7B.!!$R1 1904
5 TraesCS5D01G209800 chr7A 166602156 166603372 1216 True 1232.0 1232 84.9960 500 1744 1 chr7A.!!$R1 1244
6 TraesCS5D01G209800 chr5B 29219416 29220618 1202 True 1162.0 1162 84.1550 478 1708 1 chr5B.!!$R1 1230
7 TraesCS5D01G209800 chr6B 46842145 46843305 1160 True 1147.0 1147 84.5320 500 1690 1 chr6B.!!$R1 1190
8 TraesCS5D01G209800 chr6B 106527804 106529511 1707 False 1044.0 1155 87.2970 500 2404 2 chr6B.!!$F1 1904
9 TraesCS5D01G209800 chr3B 464197158 464198119 961 False 1105.0 1105 87.4480 500 1460 1 chr3B.!!$F1 960
10 TraesCS5D01G209800 chr4B 653616934 653618366 1432 True 908.5 1096 86.5815 1037 2404 2 chr4B.!!$R1 1367
11 TraesCS5D01G209800 chr1A 579877567 579878433 866 True 663.5 1090 86.8340 1489 2404 2 chr1A.!!$R1 915
12 TraesCS5D01G209800 chr2B 767703741 767704558 817 False 972.0 972 88.3500 1595 2404 1 chr2B.!!$F1 809
13 TraesCS5D01G209800 chrUn 34309953 34310742 789 False 963.0 963 88.5890 1594 2404 1 chrUn.!!$F1 810
14 TraesCS5D01G209800 chr1D 483210413 483210969 556 True 684.0 684 89.0070 1540 2094 1 chr1D.!!$R1 554

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
22 23 0.462759 CTACTGCTGCCAACCCTAGC 60.463 60.0 0.0 0.0 37.93 3.42 F
163 173 0.470766 TCCGCCTACCTCTCTCTCTC 59.529 60.0 0.0 0.0 0.00 3.20 F
164 174 0.472471 CCGCCTACCTCTCTCTCTCT 59.528 60.0 0.0 0.0 0.00 3.10 F
1229 1241 0.604578 GCCCATGCTTCACACACATT 59.395 50.0 0.0 0.0 33.53 2.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1157 1169 0.319211 CACTTGTGCGGTCTTCGGTA 60.319 55.000 0.00 0.0 39.69 4.02 R
1301 1313 4.135306 CTCATCTGTGCCTTCTATTGCAT 58.865 43.478 0.00 0.0 40.07 3.96 R
1628 1696 4.599047 TTCCCAAGCCACAACAAAATAG 57.401 40.909 0.00 0.0 0.00 1.73 R
2615 2866 0.034756 CATGTGTCGGTCACCCTTGA 59.965 55.000 3.03 0.0 45.61 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 1.983224 TCTCTACTGCTGCCAACCC 59.017 57.895 0.00 0.00 0.00 4.11
19 20 0.545309 TCTCTACTGCTGCCAACCCT 60.545 55.000 0.00 0.00 0.00 4.34
20 21 1.195115 CTCTACTGCTGCCAACCCTA 58.805 55.000 0.00 0.00 0.00 3.53
21 22 1.137872 CTCTACTGCTGCCAACCCTAG 59.862 57.143 0.00 0.00 0.00 3.02
22 23 0.462759 CTACTGCTGCCAACCCTAGC 60.463 60.000 0.00 0.00 37.93 3.42
23 24 1.198094 TACTGCTGCCAACCCTAGCA 61.198 55.000 0.00 0.00 44.45 3.49
27 28 2.352422 TGCCAACCCTAGCAGCAG 59.648 61.111 0.00 0.00 33.08 4.24
28 29 3.136791 GCCAACCCTAGCAGCAGC 61.137 66.667 0.00 0.00 42.56 5.25
89 90 3.074369 TTCGCCGCTGATCCCTCA 61.074 61.111 0.00 0.00 0.00 3.86
137 147 1.621072 CCCTCCTAGCTCAAGGTGAGT 60.621 57.143 6.23 0.00 45.94 3.41
147 157 2.895424 AAGGTGAGTTGCCCCTCCG 61.895 63.158 0.00 0.00 0.00 4.63
157 167 2.522193 CCCCTCCGCCTACCTCTC 60.522 72.222 0.00 0.00 0.00 3.20
158 168 2.604152 CCCTCCGCCTACCTCTCT 59.396 66.667 0.00 0.00 0.00 3.10
159 169 1.529713 CCCTCCGCCTACCTCTCTC 60.530 68.421 0.00 0.00 0.00 3.20
160 170 1.534697 CCTCCGCCTACCTCTCTCT 59.465 63.158 0.00 0.00 0.00 3.10
161 171 0.536460 CCTCCGCCTACCTCTCTCTC 60.536 65.000 0.00 0.00 0.00 3.20
162 172 0.472471 CTCCGCCTACCTCTCTCTCT 59.528 60.000 0.00 0.00 0.00 3.10
163 173 0.470766 TCCGCCTACCTCTCTCTCTC 59.529 60.000 0.00 0.00 0.00 3.20
164 174 0.472471 CCGCCTACCTCTCTCTCTCT 59.528 60.000 0.00 0.00 0.00 3.10
165 175 1.542547 CCGCCTACCTCTCTCTCTCTC 60.543 61.905 0.00 0.00 0.00 3.20
166 176 1.542547 CGCCTACCTCTCTCTCTCTCC 60.543 61.905 0.00 0.00 0.00 3.71
181 191 3.309296 TCTCTCCCTCTCTCTCTCTCTC 58.691 54.545 0.00 0.00 0.00 3.20
211 221 6.942005 TCTGGTGTATGAATGTGACTGAAAAT 59.058 34.615 0.00 0.00 0.00 1.82
238 248 8.641499 TGAAAAATTGAGTTACATTTGGACAC 57.359 30.769 0.00 0.00 0.00 3.67
245 255 5.654650 TGAGTTACATTTGGACACCTTTGTT 59.345 36.000 0.00 0.00 35.47 2.83
314 324 4.502171 TGGTCATTGTTTATGTGCTGTG 57.498 40.909 0.00 0.00 35.64 3.66
351 361 6.263168 GGTAGCATATTTTAGGTGACATGCTT 59.737 38.462 11.63 0.00 44.95 3.91
366 376 6.798959 GTGACATGCTTTGTTCTTATCTGTTC 59.201 38.462 0.00 0.00 39.18 3.18
392 402 8.939929 CGATAATGCTAATGTAATCTGGACATT 58.060 33.333 6.29 6.29 46.59 2.71
469 479 4.262164 GGATGTTGACACCTGAATTTGCTT 60.262 41.667 0.00 0.00 0.00 3.91
572 582 6.375736 TCAAACAATTGCGGACTGGAAATATA 59.624 34.615 5.05 0.00 36.45 0.86
649 659 5.481824 TGATGAGAACTGGACTTGAGTACAT 59.518 40.000 0.00 0.00 38.38 2.29
672 682 5.812665 GCATAAGCAAGTGAGAAACAAAC 57.187 39.130 0.00 0.00 41.58 2.93
757 768 3.445805 GGTGGGACTTTGAGAAAAACACA 59.554 43.478 0.00 0.00 0.00 3.72
813 824 6.074676 GCAAAAGTTGTAAGTTCTCATGCTTG 60.075 38.462 0.00 0.00 0.00 4.01
831 842 6.826893 TGCTTGTGTTTCTCATTAAAAAGC 57.173 33.333 0.00 0.00 0.00 3.51
991 1003 1.353022 GTAGTGACCATTGGAACCCCA 59.647 52.381 10.37 0.00 41.64 4.96
1030 1042 5.941788 CCCCCTCTAGTGTAGCATTAAAAT 58.058 41.667 0.00 0.00 0.00 1.82
1157 1169 3.195825 ACGATTCCGGAGAAGAACAAGAT 59.804 43.478 3.34 0.00 40.78 2.40
1229 1241 0.604578 GCCCATGCTTCACACACATT 59.395 50.000 0.00 0.00 33.53 2.71
1270 1282 4.349342 AGAAAGATGAGACCACCTCTGTTT 59.651 41.667 0.00 0.00 42.44 2.83
1301 1313 3.342719 TGGATTTAGTTCATGCTTGCGA 58.657 40.909 0.00 0.00 0.00 5.10
1324 1336 2.877168 GCAATAGAAGGCACAGATGAGG 59.123 50.000 0.00 0.00 0.00 3.86
1547 1561 8.426489 ACCTAGTATTATTTGTGCTATCGGAAA 58.574 33.333 0.00 0.00 0.00 3.13
1575 1589 1.800681 GCCTATGTGTTGGCGAACC 59.199 57.895 9.25 1.48 39.71 3.62
1576 1590 0.676782 GCCTATGTGTTGGCGAACCT 60.677 55.000 9.25 0.00 39.71 3.50
1577 1591 1.406341 GCCTATGTGTTGGCGAACCTA 60.406 52.381 9.25 0.00 39.71 3.08
1579 1593 3.541632 CCTATGTGTTGGCGAACCTATT 58.458 45.455 9.25 0.00 36.63 1.73
1580 1594 4.699637 CCTATGTGTTGGCGAACCTATTA 58.300 43.478 9.25 0.00 36.63 0.98
1582 1596 5.763204 CCTATGTGTTGGCGAACCTATTATT 59.237 40.000 9.25 0.00 36.63 1.40
1584 1598 5.968528 TGTGTTGGCGAACCTATTATTTT 57.031 34.783 9.25 0.00 36.63 1.82
1587 1601 6.153756 GTGTTGGCGAACCTATTATTTTGTT 58.846 36.000 9.25 0.00 36.63 2.83
1588 1602 6.088883 GTGTTGGCGAACCTATTATTTTGTTG 59.911 38.462 9.25 0.00 36.63 3.33
1589 1603 5.968528 TGGCGAACCTATTATTTTGTTGT 57.031 34.783 0.00 0.00 36.63 3.32
1591 1605 4.561213 GGCGAACCTATTATTTTGTTGTGC 59.439 41.667 0.00 0.00 0.00 4.57
1594 1608 6.310224 GCGAACCTATTATTTTGTTGTGCATT 59.690 34.615 0.00 0.00 0.00 3.56
1597 1611 6.405538 ACCTATTATTTTGTTGTGCATTGGG 58.594 36.000 0.00 0.00 0.00 4.12
1628 1696 3.343941 TGCCTATGTTGGTGAACCTAC 57.656 47.619 7.07 7.07 41.21 3.18
1633 1701 6.120220 GCCTATGTTGGTGAACCTACTATTT 58.880 40.000 13.88 1.78 41.37 1.40
1641 1709 5.533154 TGGTGAACCTACTATTTTGTTGTGG 59.467 40.000 0.37 0.00 36.82 4.17
1642 1710 5.458015 GTGAACCTACTATTTTGTTGTGGC 58.542 41.667 0.00 0.00 0.00 5.01
1644 1712 5.830991 TGAACCTACTATTTTGTTGTGGCTT 59.169 36.000 0.00 0.00 0.00 4.35
1645 1713 5.705609 ACCTACTATTTTGTTGTGGCTTG 57.294 39.130 0.00 0.00 0.00 4.01
1646 1714 4.522789 ACCTACTATTTTGTTGTGGCTTGG 59.477 41.667 0.00 0.00 0.00 3.61
1647 1715 4.082245 CCTACTATTTTGTTGTGGCTTGGG 60.082 45.833 0.00 0.00 0.00 4.12
1755 1932 2.906691 TGTTGTGCCTTGGGAAAATG 57.093 45.000 0.00 0.00 0.00 2.32
1759 1936 3.922171 TGTGCCTTGGGAAAATGTTTT 57.078 38.095 0.00 0.00 0.00 2.43
1781 1958 9.455847 GTTTTTGCCTATGTTGATGAATCTATC 57.544 33.333 0.00 0.00 0.00 2.08
1926 2173 6.275335 ACAACATAATATGGACATGCTTTGC 58.725 36.000 5.16 0.00 33.60 3.68
2089 2337 2.033299 ACGGCAAGTGTGTTCTTTGATG 59.967 45.455 0.00 0.00 0.00 3.07
2107 2355 4.459330 TGATGTTCATGACTTGTTGGTGA 58.541 39.130 0.00 0.00 0.00 4.02
2404 2655 5.182001 GGTGCAATTGATGGGACTCATATAC 59.818 44.000 10.34 0.00 35.97 1.47
2405 2656 5.764686 GTGCAATTGATGGGACTCATATACA 59.235 40.000 10.34 0.00 35.97 2.29
2406 2657 5.764686 TGCAATTGATGGGACTCATATACAC 59.235 40.000 10.34 0.00 35.97 2.90
2407 2658 6.000219 GCAATTGATGGGACTCATATACACT 59.000 40.000 10.34 0.00 35.97 3.55
2408 2659 7.161404 GCAATTGATGGGACTCATATACACTA 58.839 38.462 10.34 0.00 35.97 2.74
2409 2660 7.118390 GCAATTGATGGGACTCATATACACTAC 59.882 40.741 10.34 0.00 35.97 2.73
2410 2661 7.855784 ATTGATGGGACTCATATACACTACA 57.144 36.000 0.00 0.00 35.97 2.74
2411 2662 7.669089 TTGATGGGACTCATATACACTACAA 57.331 36.000 0.00 0.00 35.97 2.41
2412 2663 7.669089 TGATGGGACTCATATACACTACAAA 57.331 36.000 0.00 0.00 35.97 2.83
2413 2664 8.084985 TGATGGGACTCATATACACTACAAAA 57.915 34.615 0.00 0.00 35.97 2.44
2414 2665 8.544622 TGATGGGACTCATATACACTACAAAAA 58.455 33.333 0.00 0.00 35.97 1.94
2439 2690 8.985315 AAATACACTTCCATGATGATACATGT 57.015 30.769 2.69 2.69 44.00 3.21
2440 2691 8.985315 AATACACTTCCATGATGATACATGTT 57.015 30.769 2.30 0.00 44.00 2.71
2441 2692 8.985315 ATACACTTCCATGATGATACATGTTT 57.015 30.769 2.30 0.00 44.00 2.83
2442 2693 7.092137 ACACTTCCATGATGATACATGTTTG 57.908 36.000 2.30 0.00 44.00 2.93
2443 2694 6.660521 ACACTTCCATGATGATACATGTTTGT 59.339 34.615 2.30 0.00 44.00 2.83
2444 2695 7.148188 ACACTTCCATGATGATACATGTTTGTC 60.148 37.037 2.30 0.95 44.00 3.18
2445 2696 6.885918 ACTTCCATGATGATACATGTTTGTCA 59.114 34.615 2.30 7.19 44.00 3.58
2446 2697 6.682423 TCCATGATGATACATGTTTGTCAC 57.318 37.500 2.30 3.18 44.00 3.67
2447 2698 6.417258 TCCATGATGATACATGTTTGTCACT 58.583 36.000 2.30 0.00 44.00 3.41
2448 2699 6.316890 TCCATGATGATACATGTTTGTCACTG 59.683 38.462 2.30 5.85 44.00 3.66
2449 2700 6.094464 CCATGATGATACATGTTTGTCACTGT 59.906 38.462 2.30 0.00 44.00 3.55
2450 2701 7.280652 CCATGATGATACATGTTTGTCACTGTA 59.719 37.037 2.30 0.00 44.00 2.74
2451 2702 7.832503 TGATGATACATGTTTGTCACTGTAG 57.167 36.000 2.30 0.00 37.28 2.74
2452 2703 6.818142 TGATGATACATGTTTGTCACTGTAGG 59.182 38.462 2.30 0.00 37.28 3.18
2453 2704 6.109156 TGATACATGTTTGTCACTGTAGGT 57.891 37.500 2.30 0.00 37.28 3.08
2454 2705 6.163476 TGATACATGTTTGTCACTGTAGGTC 58.837 40.000 2.30 0.00 37.28 3.85
2455 2706 4.415881 ACATGTTTGTCACTGTAGGTCA 57.584 40.909 0.00 0.00 0.00 4.02
2456 2707 4.127171 ACATGTTTGTCACTGTAGGTCAC 58.873 43.478 0.00 0.00 0.00 3.67
2457 2708 2.816689 TGTTTGTCACTGTAGGTCACG 58.183 47.619 0.00 0.00 0.00 4.35
2458 2709 2.166870 TGTTTGTCACTGTAGGTCACGT 59.833 45.455 0.00 0.00 0.00 4.49
2459 2710 3.192466 GTTTGTCACTGTAGGTCACGTT 58.808 45.455 0.00 0.00 0.00 3.99
2460 2711 3.530265 TTGTCACTGTAGGTCACGTTT 57.470 42.857 0.00 0.00 0.00 3.60
2461 2712 3.530265 TGTCACTGTAGGTCACGTTTT 57.470 42.857 0.00 0.00 0.00 2.43
2462 2713 3.450578 TGTCACTGTAGGTCACGTTTTC 58.549 45.455 0.00 0.00 0.00 2.29
2463 2714 3.131577 TGTCACTGTAGGTCACGTTTTCT 59.868 43.478 0.00 0.00 0.00 2.52
2464 2715 3.489785 GTCACTGTAGGTCACGTTTTCTG 59.510 47.826 0.00 0.00 0.00 3.02
2465 2716 3.131577 TCACTGTAGGTCACGTTTTCTGT 59.868 43.478 0.00 0.00 0.00 3.41
2466 2717 3.489785 CACTGTAGGTCACGTTTTCTGTC 59.510 47.826 0.00 0.00 0.00 3.51
2467 2718 3.131577 ACTGTAGGTCACGTTTTCTGTCA 59.868 43.478 0.00 0.00 0.00 3.58
2468 2719 4.202223 ACTGTAGGTCACGTTTTCTGTCAT 60.202 41.667 0.00 0.00 0.00 3.06
2469 2720 4.055360 TGTAGGTCACGTTTTCTGTCATG 58.945 43.478 0.00 0.00 0.00 3.07
2470 2721 1.873591 AGGTCACGTTTTCTGTCATGC 59.126 47.619 0.00 0.00 0.00 4.06
2471 2722 1.601903 GGTCACGTTTTCTGTCATGCA 59.398 47.619 0.00 0.00 0.00 3.96
2472 2723 2.226437 GGTCACGTTTTCTGTCATGCAT 59.774 45.455 0.00 0.00 0.00 3.96
2473 2724 3.228749 GTCACGTTTTCTGTCATGCATG 58.771 45.455 21.07 21.07 0.00 4.06
2474 2725 2.877786 TCACGTTTTCTGTCATGCATGT 59.122 40.909 25.43 0.00 0.00 3.21
2475 2726 4.061596 TCACGTTTTCTGTCATGCATGTA 58.938 39.130 25.43 14.98 0.00 2.29
2476 2727 4.084066 TCACGTTTTCTGTCATGCATGTAC 60.084 41.667 25.43 20.69 0.00 2.90
2477 2728 3.812609 ACGTTTTCTGTCATGCATGTACA 59.187 39.130 25.43 23.54 0.00 2.90
2478 2729 4.455533 ACGTTTTCTGTCATGCATGTACAT 59.544 37.500 25.43 1.41 0.00 2.29
2479 2730 5.023920 CGTTTTCTGTCATGCATGTACATC 58.976 41.667 25.43 12.48 0.00 3.06
2480 2731 5.335127 GTTTTCTGTCATGCATGTACATCC 58.665 41.667 25.43 0.00 0.00 3.51
2481 2732 3.910568 TCTGTCATGCATGTACATCCA 57.089 42.857 25.43 2.99 0.00 3.41
2482 2733 4.426736 TCTGTCATGCATGTACATCCAT 57.573 40.909 25.43 6.44 0.00 3.41
2483 2734 4.131596 TCTGTCATGCATGTACATCCATG 58.868 43.478 27.23 27.23 44.07 3.66
2484 2735 4.131596 CTGTCATGCATGTACATCCATGA 58.868 43.478 30.25 30.25 43.99 3.07
2486 2737 4.153673 TCATGCATGTACATCCATGACA 57.846 40.909 30.25 15.42 43.99 3.58
2487 2738 4.525024 TCATGCATGTACATCCATGACAA 58.475 39.130 30.25 14.80 43.99 3.18
2488 2739 4.948621 TCATGCATGTACATCCATGACAAA 59.051 37.500 30.25 14.49 43.99 2.83
2489 2740 5.595133 TCATGCATGTACATCCATGACAAAT 59.405 36.000 30.25 0.02 43.99 2.32
2490 2741 5.918426 TGCATGTACATCCATGACAAATT 57.082 34.783 5.07 0.00 43.99 1.82
2491 2742 6.283544 TGCATGTACATCCATGACAAATTT 57.716 33.333 5.07 0.00 43.99 1.82
2492 2743 7.401955 TGCATGTACATCCATGACAAATTTA 57.598 32.000 5.07 0.00 43.99 1.40
2493 2744 8.009622 TGCATGTACATCCATGACAAATTTAT 57.990 30.769 5.07 0.00 43.99 1.40
2494 2745 7.921745 TGCATGTACATCCATGACAAATTTATG 59.078 33.333 5.07 0.00 43.99 1.90
2495 2746 8.136800 GCATGTACATCCATGACAAATTTATGA 58.863 33.333 5.07 0.00 43.99 2.15
2519 2770 9.593565 TGATAGAATCAAGATAGTCATACCTGT 57.406 33.333 0.00 0.00 36.11 4.00
2520 2771 9.853555 GATAGAATCAAGATAGTCATACCTGTG 57.146 37.037 0.00 0.00 0.00 3.66
2521 2772 6.520272 AGAATCAAGATAGTCATACCTGTGC 58.480 40.000 0.00 0.00 0.00 4.57
2522 2773 6.326064 AGAATCAAGATAGTCATACCTGTGCT 59.674 38.462 0.00 0.00 0.00 4.40
2523 2774 5.268118 TCAAGATAGTCATACCTGTGCTG 57.732 43.478 0.00 0.00 0.00 4.41
2524 2775 4.711846 TCAAGATAGTCATACCTGTGCTGT 59.288 41.667 0.00 0.00 0.00 4.40
2525 2776 4.927978 AGATAGTCATACCTGTGCTGTC 57.072 45.455 0.00 0.00 0.00 3.51
2526 2777 3.316588 AGATAGTCATACCTGTGCTGTCG 59.683 47.826 0.00 0.00 0.00 4.35
2527 2778 1.257743 AGTCATACCTGTGCTGTCGT 58.742 50.000 0.00 0.00 0.00 4.34
2528 2779 2.443416 AGTCATACCTGTGCTGTCGTA 58.557 47.619 0.00 0.00 0.00 3.43
2529 2780 2.423892 AGTCATACCTGTGCTGTCGTAG 59.576 50.000 0.00 0.00 0.00 3.51
2530 2781 2.422479 GTCATACCTGTGCTGTCGTAGA 59.578 50.000 0.00 0.00 0.00 2.59
2531 2782 3.086282 TCATACCTGTGCTGTCGTAGAA 58.914 45.455 0.00 0.00 39.69 2.10
2532 2783 3.128764 TCATACCTGTGCTGTCGTAGAAG 59.871 47.826 0.00 0.00 39.69 2.85
2533 2784 1.329256 ACCTGTGCTGTCGTAGAAGT 58.671 50.000 0.00 0.00 39.69 3.01
2534 2785 1.000163 ACCTGTGCTGTCGTAGAAGTG 60.000 52.381 0.00 0.00 39.69 3.16
2535 2786 1.000163 CCTGTGCTGTCGTAGAAGTGT 60.000 52.381 0.00 0.00 39.69 3.55
2536 2787 2.545952 CCTGTGCTGTCGTAGAAGTGTT 60.546 50.000 0.00 0.00 39.69 3.32
2537 2788 2.726760 CTGTGCTGTCGTAGAAGTGTTC 59.273 50.000 0.00 0.00 39.69 3.18
2538 2789 2.059541 GTGCTGTCGTAGAAGTGTTCC 58.940 52.381 0.00 0.00 39.69 3.62
2539 2790 1.684450 TGCTGTCGTAGAAGTGTTCCA 59.316 47.619 0.00 0.00 39.69 3.53
2540 2791 2.299013 TGCTGTCGTAGAAGTGTTCCAT 59.701 45.455 0.00 0.00 39.69 3.41
2541 2792 2.668457 GCTGTCGTAGAAGTGTTCCATG 59.332 50.000 0.00 0.00 39.69 3.66
2542 2793 3.614150 GCTGTCGTAGAAGTGTTCCATGA 60.614 47.826 0.00 0.00 39.69 3.07
2543 2794 3.909430 TGTCGTAGAAGTGTTCCATGAC 58.091 45.455 0.00 1.80 39.69 3.06
2544 2795 3.319689 TGTCGTAGAAGTGTTCCATGACA 59.680 43.478 6.17 6.17 42.33 3.58
2545 2796 4.021456 TGTCGTAGAAGTGTTCCATGACAT 60.021 41.667 6.17 0.00 40.63 3.06
2546 2797 4.929808 GTCGTAGAAGTGTTCCATGACATT 59.070 41.667 0.00 0.00 39.69 2.71
2547 2798 6.097356 GTCGTAGAAGTGTTCCATGACATTA 58.903 40.000 0.00 0.00 39.69 1.90
2548 2799 6.034683 GTCGTAGAAGTGTTCCATGACATTAC 59.965 42.308 0.00 0.00 39.69 1.89
2549 2800 5.291128 CGTAGAAGTGTTCCATGACATTACC 59.709 44.000 0.00 0.00 0.00 2.85
2550 2801 5.241403 AGAAGTGTTCCATGACATTACCA 57.759 39.130 0.00 0.00 0.00 3.25
2551 2802 5.630121 AGAAGTGTTCCATGACATTACCAA 58.370 37.500 0.00 0.00 0.00 3.67
2552 2803 6.068010 AGAAGTGTTCCATGACATTACCAAA 58.932 36.000 0.00 0.00 0.00 3.28
2553 2804 6.549364 AGAAGTGTTCCATGACATTACCAAAA 59.451 34.615 0.00 0.00 0.00 2.44
2554 2805 6.916360 AGTGTTCCATGACATTACCAAAAT 57.084 33.333 0.00 0.00 0.00 1.82
2555 2806 7.301868 AGTGTTCCATGACATTACCAAAATT 57.698 32.000 0.00 0.00 0.00 1.82
2556 2807 8.415950 AGTGTTCCATGACATTACCAAAATTA 57.584 30.769 0.00 0.00 0.00 1.40
2557 2808 9.034800 AGTGTTCCATGACATTACCAAAATTAT 57.965 29.630 0.00 0.00 0.00 1.28
2558 2809 9.301153 GTGTTCCATGACATTACCAAAATTATC 57.699 33.333 0.00 0.00 0.00 1.75
2559 2810 9.029368 TGTTCCATGACATTACCAAAATTATCA 57.971 29.630 0.00 0.00 0.00 2.15
2562 2813 9.418839 TCCATGACATTACCAAAATTATCATCA 57.581 29.630 0.00 0.00 0.00 3.07
2563 2814 9.467258 CCATGACATTACCAAAATTATCATCAC 57.533 33.333 0.00 0.00 0.00 3.06
2564 2815 9.172820 CATGACATTACCAAAATTATCATCACG 57.827 33.333 0.00 0.00 0.00 4.35
2565 2816 7.702386 TGACATTACCAAAATTATCATCACGG 58.298 34.615 0.00 0.00 0.00 4.94
2566 2817 7.554476 TGACATTACCAAAATTATCATCACGGA 59.446 33.333 0.00 0.00 0.00 4.69
2567 2818 8.287439 ACATTACCAAAATTATCATCACGGAA 57.713 30.769 0.00 0.00 0.00 4.30
2568 2819 8.405531 ACATTACCAAAATTATCATCACGGAAG 58.594 33.333 0.00 0.00 0.00 3.46
2589 2840 5.698741 AGTGTCCACTTCCATGATGATAA 57.301 39.130 0.00 0.00 38.83 1.75
2590 2841 6.065976 AGTGTCCACTTCCATGATGATAAA 57.934 37.500 0.00 0.00 38.83 1.40
2591 2842 6.666678 AGTGTCCACTTCCATGATGATAAAT 58.333 36.000 0.00 0.00 38.83 1.40
2592 2843 6.769822 AGTGTCCACTTCCATGATGATAAATC 59.230 38.462 0.00 0.00 38.83 2.17
2593 2844 5.759763 TGTCCACTTCCATGATGATAAATCG 59.240 40.000 0.00 0.00 0.00 3.34
2594 2845 4.756642 TCCACTTCCATGATGATAAATCGC 59.243 41.667 0.00 0.00 0.00 4.58
2595 2846 4.377738 CCACTTCCATGATGATAAATCGCG 60.378 45.833 0.00 0.00 0.00 5.87
2596 2847 3.187227 ACTTCCATGATGATAAATCGCGC 59.813 43.478 0.00 0.00 0.00 6.86
2597 2848 1.726248 TCCATGATGATAAATCGCGCG 59.274 47.619 26.76 26.76 0.00 6.86
2598 2849 1.460743 CCATGATGATAAATCGCGCGT 59.539 47.619 30.98 13.76 0.00 6.01
2599 2850 2.472886 CCATGATGATAAATCGCGCGTC 60.473 50.000 30.98 19.79 0.00 5.19
2600 2851 1.846541 TGATGATAAATCGCGCGTCA 58.153 45.000 30.98 24.94 0.00 4.35
2601 2852 1.521006 TGATGATAAATCGCGCGTCAC 59.479 47.619 30.98 18.20 0.00 3.67
2602 2853 1.521006 GATGATAAATCGCGCGTCACA 59.479 47.619 30.98 20.52 0.00 3.58
2603 2854 0.920664 TGATAAATCGCGCGTCACAG 59.079 50.000 30.98 0.00 0.00 3.66
2604 2855 1.197055 GATAAATCGCGCGTCACAGA 58.803 50.000 30.98 9.80 0.00 3.41
2605 2856 1.586578 GATAAATCGCGCGTCACAGAA 59.413 47.619 30.98 8.92 0.00 3.02
2606 2857 0.989164 TAAATCGCGCGTCACAGAAG 59.011 50.000 30.98 0.00 0.00 2.85
2607 2858 0.944311 AAATCGCGCGTCACAGAAGT 60.944 50.000 30.98 4.30 0.00 3.01
2609 2860 4.415501 CGCGCGTCACAGAAGTGC 62.416 66.667 24.19 8.13 45.49 4.40
2610 2861 3.038417 GCGCGTCACAGAAGTGCT 61.038 61.111 8.43 0.00 45.49 4.40
2611 2862 2.598632 GCGCGTCACAGAAGTGCTT 61.599 57.895 8.43 0.00 45.49 3.91
2612 2863 1.934463 CGCGTCACAGAAGTGCTTT 59.066 52.632 0.00 0.00 45.49 3.51
2613 2864 0.111089 CGCGTCACAGAAGTGCTTTC 60.111 55.000 0.00 0.00 45.49 2.62
2614 2865 0.111089 GCGTCACAGAAGTGCTTTCG 60.111 55.000 0.00 0.00 45.49 3.46
2615 2866 1.209128 CGTCACAGAAGTGCTTTCGT 58.791 50.000 0.00 0.00 45.49 3.85
2616 2867 1.190323 CGTCACAGAAGTGCTTTCGTC 59.810 52.381 0.00 0.00 45.49 4.20
2617 2868 2.201732 GTCACAGAAGTGCTTTCGTCA 58.798 47.619 0.00 0.00 45.49 4.35
2618 2869 2.607635 GTCACAGAAGTGCTTTCGTCAA 59.392 45.455 0.00 0.00 45.49 3.18
2619 2870 2.866156 TCACAGAAGTGCTTTCGTCAAG 59.134 45.455 0.00 0.00 45.49 3.02
2620 2871 2.032549 CACAGAAGTGCTTTCGTCAAGG 60.033 50.000 0.00 0.00 40.86 3.61
2621 2872 1.532868 CAGAAGTGCTTTCGTCAAGGG 59.467 52.381 0.00 0.00 40.86 3.95
2622 2873 1.141053 AGAAGTGCTTTCGTCAAGGGT 59.859 47.619 0.00 0.00 40.86 4.34
2623 2874 1.264288 GAAGTGCTTTCGTCAAGGGTG 59.736 52.381 0.00 0.00 32.37 4.61
2624 2875 0.468226 AGTGCTTTCGTCAAGGGTGA 59.532 50.000 0.00 0.00 32.37 4.02
2639 2890 4.615901 TGACCGACACATGGCATC 57.384 55.556 0.00 0.00 0.00 3.91
2640 2891 1.078497 TGACCGACACATGGCATCC 60.078 57.895 0.00 0.00 0.00 3.51
2641 2892 1.078497 GACCGACACATGGCATCCA 60.078 57.895 0.00 0.00 38.19 3.41
2642 2893 1.369091 GACCGACACATGGCATCCAC 61.369 60.000 0.00 0.00 35.80 4.02
2643 2894 2.114670 CCGACACATGGCATCCACC 61.115 63.158 0.00 0.00 35.80 4.61
2644 2895 2.463620 CGACACATGGCATCCACCG 61.464 63.158 0.00 0.00 35.80 4.94
2645 2896 1.377202 GACACATGGCATCCACCGT 60.377 57.895 0.00 0.00 35.80 4.83
2646 2897 0.107897 GACACATGGCATCCACCGTA 60.108 55.000 0.00 0.00 35.80 4.02
2647 2898 0.326595 ACACATGGCATCCACCGTAA 59.673 50.000 0.00 0.00 35.80 3.18
2648 2899 0.732571 CACATGGCATCCACCGTAAC 59.267 55.000 0.00 0.00 35.80 2.50
2649 2900 0.742990 ACATGGCATCCACCGTAACG 60.743 55.000 0.00 0.00 35.80 3.18
2668 2919 0.850856 GGAACGCCGTTAAGCTATCG 59.149 55.000 0.79 0.00 0.00 2.92
2669 2920 0.850856 GAACGCCGTTAAGCTATCGG 59.149 55.000 0.79 16.35 45.94 4.18
2670 2921 0.529119 AACGCCGTTAAGCTATCGGG 60.529 55.000 20.20 14.38 43.77 5.14
2671 2922 1.066918 CGCCGTTAAGCTATCGGGT 59.933 57.895 20.20 0.00 43.77 5.28
2672 2923 0.938168 CGCCGTTAAGCTATCGGGTC 60.938 60.000 20.20 8.27 43.77 4.46
2673 2924 0.599466 GCCGTTAAGCTATCGGGTCC 60.599 60.000 20.20 5.73 43.77 4.46
2674 2925 0.318445 CCGTTAAGCTATCGGGTCCG 60.318 60.000 13.87 2.52 40.49 4.79
2675 2926 0.318445 CGTTAAGCTATCGGGTCCGG 60.318 60.000 9.68 0.00 40.25 5.14
2676 2927 0.749049 GTTAAGCTATCGGGTCCGGT 59.251 55.000 9.68 4.84 40.25 5.28
2677 2928 1.137675 GTTAAGCTATCGGGTCCGGTT 59.862 52.381 9.68 0.69 40.25 4.44
2678 2929 1.488390 TAAGCTATCGGGTCCGGTTT 58.512 50.000 9.68 1.15 40.25 3.27
2679 2930 0.616891 AAGCTATCGGGTCCGGTTTT 59.383 50.000 9.68 0.00 40.25 2.43
2680 2931 0.107848 AGCTATCGGGTCCGGTTTTG 60.108 55.000 9.68 0.00 40.25 2.44
2681 2932 1.093496 GCTATCGGGTCCGGTTTTGG 61.093 60.000 9.68 0.00 40.25 3.28
2682 2933 0.538118 CTATCGGGTCCGGTTTTGGA 59.462 55.000 9.68 0.00 40.25 3.53
2683 2934 1.140252 CTATCGGGTCCGGTTTTGGAT 59.860 52.381 9.68 2.25 40.91 3.41
2684 2935 0.107361 ATCGGGTCCGGTTTTGGATC 60.107 55.000 9.68 0.00 40.91 3.36
2686 2937 3.899395 GGTCCGGTTTTGGATCCG 58.101 61.111 7.39 0.00 45.42 4.18
2694 2945 1.944709 GGTTTTGGATCCGATAACCCG 59.055 52.381 22.63 0.00 33.72 5.28
2695 2946 2.635714 GTTTTGGATCCGATAACCCGT 58.364 47.619 7.39 0.00 0.00 5.28
2696 2947 3.011818 GTTTTGGATCCGATAACCCGTT 58.988 45.455 7.39 0.00 0.00 4.44
2697 2948 4.190772 GTTTTGGATCCGATAACCCGTTA 58.809 43.478 7.39 0.00 0.00 3.18
2698 2949 4.484537 TTTGGATCCGATAACCCGTTAA 57.515 40.909 7.39 0.00 0.00 2.01
2699 2950 3.457610 TGGATCCGATAACCCGTTAAC 57.542 47.619 7.39 0.00 0.00 2.01
2700 2951 2.765135 TGGATCCGATAACCCGTTAACA 59.235 45.455 7.39 0.00 0.00 2.41
2701 2952 3.181473 TGGATCCGATAACCCGTTAACAG 60.181 47.826 7.39 0.00 0.00 3.16
2702 2953 2.298411 TCCGATAACCCGTTAACAGC 57.702 50.000 6.39 0.00 0.00 4.40
2703 2954 1.134729 TCCGATAACCCGTTAACAGCC 60.135 52.381 6.39 0.00 0.00 4.85
2704 2955 1.292992 CGATAACCCGTTAACAGCCC 58.707 55.000 6.39 0.00 0.00 5.19
2705 2956 1.671979 GATAACCCGTTAACAGCCCC 58.328 55.000 6.39 0.00 0.00 5.80
2706 2957 0.107557 ATAACCCGTTAACAGCCCCG 60.108 55.000 6.39 0.00 0.00 5.73
2707 2958 1.190833 TAACCCGTTAACAGCCCCGA 61.191 55.000 6.39 0.00 0.00 5.14
2708 2959 2.435410 CCCGTTAACAGCCCCGAC 60.435 66.667 6.39 0.00 0.00 4.79
2709 2960 2.435410 CCGTTAACAGCCCCGACC 60.435 66.667 6.39 0.00 0.00 4.79
2710 2961 2.344500 CGTTAACAGCCCCGACCA 59.656 61.111 6.39 0.00 0.00 4.02
2711 2962 1.301874 CGTTAACAGCCCCGACCAA 60.302 57.895 6.39 0.00 0.00 3.67
2712 2963 0.675522 CGTTAACAGCCCCGACCAAT 60.676 55.000 6.39 0.00 0.00 3.16
2713 2964 0.808755 GTTAACAGCCCCGACCAATG 59.191 55.000 0.00 0.00 0.00 2.82
2714 2965 0.322997 TTAACAGCCCCGACCAATGG 60.323 55.000 0.00 0.00 0.00 3.16
2715 2966 2.204865 TAACAGCCCCGACCAATGGG 62.205 60.000 3.55 0.00 46.93 4.00
2721 2972 3.298320 CCCGACCAATGGGGATTTT 57.702 52.632 3.55 0.00 46.95 1.82
2722 2973 1.111277 CCCGACCAATGGGGATTTTC 58.889 55.000 3.55 0.00 46.95 2.29
2723 2974 1.111277 CCGACCAATGGGGATTTTCC 58.889 55.000 3.55 0.00 41.15 3.13
2724 2975 1.618345 CCGACCAATGGGGATTTTCCA 60.618 52.381 3.55 0.00 38.64 3.53
2725 2976 1.476488 CGACCAATGGGGATTTTCCAC 59.524 52.381 3.55 0.00 41.45 4.02
2735 2986 6.293004 TGGGGATTTTCCACATGTAAAATC 57.707 37.500 25.52 25.52 46.95 2.17
2736 2987 5.782331 TGGGGATTTTCCACATGTAAAATCA 59.218 36.000 30.07 18.03 46.95 2.57
2737 2988 6.443206 TGGGGATTTTCCACATGTAAAATCAT 59.557 34.615 30.07 14.71 46.95 2.45
2738 2989 6.986231 GGGGATTTTCCACATGTAAAATCATC 59.014 38.462 30.07 24.16 46.62 2.92
2739 2990 7.364585 GGGGATTTTCCACATGTAAAATCATCA 60.365 37.037 30.07 10.73 46.62 3.07
2740 2991 8.206189 GGGATTTTCCACATGTAAAATCATCAT 58.794 33.333 30.07 13.72 46.62 2.45
2741 2992 9.603921 GGATTTTCCACATGTAAAATCATCATT 57.396 29.630 30.07 9.80 46.62 2.57
2743 2994 8.774890 TTTTCCACATGTAAAATCATCATTGG 57.225 30.769 0.00 0.00 0.00 3.16
2744 2995 5.904941 TCCACATGTAAAATCATCATTGGC 58.095 37.500 0.00 0.00 0.00 4.52
2745 2996 5.657745 TCCACATGTAAAATCATCATTGGCT 59.342 36.000 0.00 0.00 0.00 4.75
2746 2997 5.751509 CCACATGTAAAATCATCATTGGCTG 59.248 40.000 0.00 0.00 0.00 4.85
2747 2998 5.751509 CACATGTAAAATCATCATTGGCTGG 59.248 40.000 0.00 0.00 0.00 4.85
2748 2999 5.657745 ACATGTAAAATCATCATTGGCTGGA 59.342 36.000 0.00 0.00 0.00 3.86
2749 3000 5.840243 TGTAAAATCATCATTGGCTGGAG 57.160 39.130 0.00 0.00 0.00 3.86
2750 3001 4.646040 TGTAAAATCATCATTGGCTGGAGG 59.354 41.667 0.00 0.00 0.00 4.30
2751 3002 3.675348 AAATCATCATTGGCTGGAGGA 57.325 42.857 0.00 0.00 0.00 3.71
2752 3003 3.675348 AATCATCATTGGCTGGAGGAA 57.325 42.857 0.00 0.00 0.00 3.36
2753 3004 3.675348 ATCATCATTGGCTGGAGGAAA 57.325 42.857 0.00 0.00 0.00 3.13
2754 3005 2.726821 TCATCATTGGCTGGAGGAAAC 58.273 47.619 0.00 0.00 0.00 2.78
2755 3006 2.041485 TCATCATTGGCTGGAGGAAACA 59.959 45.455 0.00 0.00 0.00 2.83
2756 3007 1.909700 TCATTGGCTGGAGGAAACAC 58.090 50.000 0.00 0.00 0.00 3.32
2757 3008 0.523072 CATTGGCTGGAGGAAACACG 59.477 55.000 0.00 0.00 0.00 4.49
2758 3009 0.110486 ATTGGCTGGAGGAAACACGT 59.890 50.000 0.00 0.00 0.00 4.49
2759 3010 0.817634 TTGGCTGGAGGAAACACGTG 60.818 55.000 15.48 15.48 0.00 4.49
2760 3011 2.617274 GGCTGGAGGAAACACGTGC 61.617 63.158 17.22 0.00 0.00 5.34
2761 3012 2.617274 GCTGGAGGAAACACGTGCC 61.617 63.158 17.22 9.19 0.00 5.01
2762 3013 2.280524 TGGAGGAAACACGTGCCG 60.281 61.111 17.22 0.00 0.00 5.69
2763 3014 3.047877 GGAGGAAACACGTGCCGG 61.048 66.667 17.22 0.00 0.00 6.13
2764 3015 3.723348 GAGGAAACACGTGCCGGC 61.723 66.667 22.73 22.73 0.00 6.13
2765 3016 4.250305 AGGAAACACGTGCCGGCT 62.250 61.111 29.70 4.49 0.00 5.52
2766 3017 3.723348 GGAAACACGTGCCGGCTC 61.723 66.667 29.70 23.91 0.00 4.70
2767 3018 2.970324 GAAACACGTGCCGGCTCA 60.970 61.111 29.70 4.80 0.00 4.26
2768 3019 3.236618 GAAACACGTGCCGGCTCAC 62.237 63.158 29.70 17.80 0.00 3.51
2779 3030 2.668550 GGCTCACCGTTGGGACAC 60.669 66.667 0.00 0.00 39.29 3.67
2780 3031 2.110213 GCTCACCGTTGGGACACA 59.890 61.111 0.00 0.00 39.29 3.72
2781 3032 1.302511 GCTCACCGTTGGGACACAT 60.303 57.895 0.00 0.00 39.29 3.21
2782 3033 1.577328 GCTCACCGTTGGGACACATG 61.577 60.000 0.00 0.00 39.29 3.21
2783 3034 1.577328 CTCACCGTTGGGACACATGC 61.577 60.000 0.00 0.00 39.29 4.06
2784 3035 2.282180 ACCGTTGGGACACATGCC 60.282 61.111 0.00 0.00 39.29 4.40
2785 3036 2.282110 CCGTTGGGACACATGCCA 60.282 61.111 0.00 0.00 46.24 4.92
2789 3040 3.505570 TGGGACACATGCCATCCA 58.494 55.556 11.46 4.08 42.35 3.41
2790 3041 1.001020 TGGGACACATGCCATCCAC 60.001 57.895 11.46 3.54 42.35 4.02
2791 3042 1.304282 GGGACACATGCCATCCACT 59.696 57.895 11.46 0.00 36.03 4.00
2792 3043 0.749454 GGGACACATGCCATCCACTC 60.749 60.000 11.46 0.00 36.03 3.51
2793 3044 0.035152 GGACACATGCCATCCACTCA 60.035 55.000 5.77 0.00 32.35 3.41
2794 3045 1.409241 GGACACATGCCATCCACTCAT 60.409 52.381 5.77 0.00 32.35 2.90
2795 3046 2.372264 GACACATGCCATCCACTCATT 58.628 47.619 0.00 0.00 0.00 2.57
2796 3047 2.097036 ACACATGCCATCCACTCATTG 58.903 47.619 0.00 0.00 0.00 2.82
2807 3058 2.320805 CACTCATTGGACACAAAGCG 57.679 50.000 0.00 0.00 40.55 4.68
2808 3059 0.593128 ACTCATTGGACACAAAGCGC 59.407 50.000 0.00 0.00 40.55 5.92
2809 3060 0.109597 CTCATTGGACACAAAGCGCC 60.110 55.000 2.29 0.00 40.55 6.53
2810 3061 0.537143 TCATTGGACACAAAGCGCCT 60.537 50.000 2.29 0.00 40.55 5.52
2811 3062 1.164411 CATTGGACACAAAGCGCCTA 58.836 50.000 2.29 0.00 40.55 3.93
2812 3063 1.745087 CATTGGACACAAAGCGCCTAT 59.255 47.619 2.29 0.00 40.55 2.57
2813 3064 1.164411 TTGGACACAAAGCGCCTATG 58.836 50.000 2.29 3.00 32.66 2.23
2814 3065 0.323302 TGGACACAAAGCGCCTATGA 59.677 50.000 2.29 0.00 0.00 2.15
2815 3066 1.065491 TGGACACAAAGCGCCTATGAT 60.065 47.619 2.29 0.00 0.00 2.45
2816 3067 2.169561 TGGACACAAAGCGCCTATGATA 59.830 45.455 2.29 0.00 0.00 2.15
2817 3068 2.544267 GGACACAAAGCGCCTATGATAC 59.456 50.000 2.29 0.00 0.00 2.24
2818 3069 2.201732 ACACAAAGCGCCTATGATACG 58.798 47.619 2.29 0.00 0.00 3.06
2819 3070 2.201732 CACAAAGCGCCTATGATACGT 58.798 47.619 2.29 0.00 0.00 3.57
2820 3071 2.218759 CACAAAGCGCCTATGATACGTC 59.781 50.000 2.29 0.00 0.00 4.34
2821 3072 1.452025 CAAAGCGCCTATGATACGTCG 59.548 52.381 2.29 0.00 0.00 5.12
2822 3073 0.949397 AAGCGCCTATGATACGTCGA 59.051 50.000 2.29 0.00 0.00 4.20
2823 3074 1.166129 AGCGCCTATGATACGTCGAT 58.834 50.000 2.29 0.00 0.00 3.59
2824 3075 2.353323 AGCGCCTATGATACGTCGATA 58.647 47.619 2.29 0.00 0.00 2.92
2825 3076 2.095532 AGCGCCTATGATACGTCGATAC 59.904 50.000 2.29 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 1.137872 CTAGGGTTGGCAGCAGTAGAG 59.862 57.143 3.14 0.00 0.00 2.43
4 5 1.198094 TGCTAGGGTTGGCAGCAGTA 61.198 55.000 3.14 0.00 40.26 2.74
6 7 2.352422 TGCTAGGGTTGGCAGCAG 59.648 61.111 3.14 0.00 40.26 4.24
11 12 3.136791 GCTGCTGCTAGGGTTGGC 61.137 66.667 8.53 0.00 36.03 4.52
12 13 2.439156 GGCTGCTGCTAGGGTTGG 60.439 66.667 15.64 0.00 39.59 3.77
13 14 2.439156 GGGCTGCTGCTAGGGTTG 60.439 66.667 15.64 0.00 39.59 3.77
14 15 2.935481 TGGGCTGCTGCTAGGGTT 60.935 61.111 15.64 0.00 39.59 4.11
15 16 3.721706 GTGGGCTGCTGCTAGGGT 61.722 66.667 15.64 0.00 39.59 4.34
16 17 4.496336 GGTGGGCTGCTGCTAGGG 62.496 72.222 15.64 0.00 39.59 3.53
17 18 4.496336 GGGTGGGCTGCTGCTAGG 62.496 72.222 15.64 0.00 39.59 3.02
18 19 4.496336 GGGGTGGGCTGCTGCTAG 62.496 72.222 15.64 0.00 39.59 3.42
73 74 3.838271 GTGAGGGATCAGCGGCGA 61.838 66.667 12.98 0.00 0.00 5.54
116 117 0.413832 TCACCTTGAGCTAGGAGGGT 59.586 55.000 9.63 0.00 38.73 4.34
137 147 4.733725 AGGTAGGCGGAGGGGCAA 62.734 66.667 0.00 0.00 45.36 4.52
147 157 1.202891 GGGAGAGAGAGAGAGGTAGGC 60.203 61.905 0.00 0.00 0.00 3.93
157 167 3.312890 AGAGAGAGAGAGGGAGAGAGAG 58.687 54.545 0.00 0.00 0.00 3.20
158 168 3.051803 AGAGAGAGAGAGAGGGAGAGAGA 60.052 52.174 0.00 0.00 0.00 3.10
159 169 3.312890 AGAGAGAGAGAGAGGGAGAGAG 58.687 54.545 0.00 0.00 0.00 3.20
160 170 3.309296 GAGAGAGAGAGAGAGGGAGAGA 58.691 54.545 0.00 0.00 0.00 3.10
161 171 2.370189 GGAGAGAGAGAGAGAGGGAGAG 59.630 59.091 0.00 0.00 0.00 3.20
162 172 2.293519 TGGAGAGAGAGAGAGAGGGAGA 60.294 54.545 0.00 0.00 0.00 3.71
163 173 2.105477 CTGGAGAGAGAGAGAGAGGGAG 59.895 59.091 0.00 0.00 0.00 4.30
164 174 2.126882 CTGGAGAGAGAGAGAGAGGGA 58.873 57.143 0.00 0.00 0.00 4.20
165 175 2.126882 TCTGGAGAGAGAGAGAGAGGG 58.873 57.143 0.00 0.00 0.00 4.30
166 176 3.649981 AGATCTGGAGAGAGAGAGAGAGG 59.350 52.174 0.00 0.00 0.00 3.69
190 200 9.462174 TTCAAATTTTCAGTCACATTCATACAC 57.538 29.630 0.00 0.00 0.00 2.90
211 221 9.658799 TGTCCAAATGTAACTCAATTTTTCAAA 57.341 25.926 0.00 0.00 0.00 2.69
220 230 5.654650 ACAAAGGTGTCCAAATGTAACTCAA 59.345 36.000 0.00 0.00 29.49 3.02
238 248 9.180678 GTTCACTTCACATTATTACAACAAAGG 57.819 33.333 0.00 0.00 0.00 3.11
245 255 8.729756 CCTTGATGTTCACTTCACATTATTACA 58.270 33.333 0.00 0.00 34.89 2.41
314 324 9.360093 CTAAAATATGCTACCATGTCTACTAGC 57.640 37.037 0.00 0.00 32.85 3.42
366 376 7.889589 TGTCCAGATTACATTAGCATTATCG 57.110 36.000 0.00 0.00 0.00 2.92
409 419 2.097304 GTCAGCACACAAACACATGTCA 59.903 45.455 0.00 0.00 0.00 3.58
558 568 5.183228 AGTGTTTGGTATATTTCCAGTCCG 58.817 41.667 0.79 0.00 36.28 4.79
561 571 8.522830 CAAATGAGTGTTTGGTATATTTCCAGT 58.477 33.333 0.79 0.00 35.86 4.00
572 582 2.693074 GGGTGTCAAATGAGTGTTTGGT 59.307 45.455 0.00 0.00 39.10 3.67
672 682 2.867975 ACTCACGTTTTAACTTGTCCCG 59.132 45.455 0.00 0.00 30.96 5.14
757 768 5.707298 CCACCACTCATTATCTTGTTTCACT 59.293 40.000 0.00 0.00 0.00 3.41
831 842 9.612620 GTAAACAAAGGATGACAAGTTTAGATG 57.387 33.333 0.00 0.00 33.63 2.90
991 1003 2.599597 GGGAGGCATGCCAGATGT 59.400 61.111 37.18 17.76 36.78 3.06
1019 1031 7.328277 ACATTCAAGGCGTATTTTAATGCTA 57.672 32.000 0.00 0.00 0.00 3.49
1030 1042 5.414144 TGATTTCATCAACATTCAAGGCGTA 59.586 36.000 0.00 0.00 36.11 4.42
1157 1169 0.319211 CACTTGTGCGGTCTTCGGTA 60.319 55.000 0.00 0.00 39.69 4.02
1270 1282 6.738731 GCATGAACTAAATCCATCGTAGAGGA 60.739 42.308 0.00 0.00 43.16 3.71
1301 1313 4.135306 CTCATCTGTGCCTTCTATTGCAT 58.865 43.478 0.00 0.00 40.07 3.96
1492 1505 8.757877 ACCAACACATAGGCATAAATATTGTTT 58.242 29.630 0.00 0.00 0.00 2.83
1573 1587 6.212388 TCCCAATGCACAACAAAATAATAGGT 59.788 34.615 0.00 0.00 0.00 3.08
1575 1589 8.545229 TTTCCCAATGCACAACAAAATAATAG 57.455 30.769 0.00 0.00 0.00 1.73
1576 1590 8.908786 TTTTCCCAATGCACAACAAAATAATA 57.091 26.923 0.00 0.00 0.00 0.98
1577 1591 7.814264 TTTTCCCAATGCACAACAAAATAAT 57.186 28.000 0.00 0.00 0.00 1.28
1579 1593 9.512588 AATATTTTCCCAATGCACAACAAAATA 57.487 25.926 11.70 11.70 31.96 1.40
1580 1594 7.999450 ATATTTTCCCAATGCACAACAAAAT 57.001 28.000 0.00 0.00 0.00 1.82
1582 1596 7.814264 AAATATTTTCCCAATGCACAACAAA 57.186 28.000 0.00 0.00 0.00 2.83
1584 1598 7.065563 GCATAAATATTTTCCCAATGCACAACA 59.934 33.333 20.46 0.00 38.44 3.33
1587 1601 6.054295 GGCATAAATATTTTCCCAATGCACA 58.946 36.000 24.08 0.00 39.91 4.57
1588 1602 6.290605 AGGCATAAATATTTTCCCAATGCAC 58.709 36.000 24.08 16.94 39.91 4.57
1589 1603 6.497624 AGGCATAAATATTTTCCCAATGCA 57.502 33.333 24.08 0.00 39.91 3.96
1594 1608 7.566879 ACCAACATAGGCATAAATATTTTCCCA 59.433 33.333 5.91 0.00 0.00 4.37
1628 1696 4.599047 TTCCCAAGCCACAACAAAATAG 57.401 40.909 0.00 0.00 0.00 1.73
1633 1701 5.070981 TGAATATTTTCCCAAGCCACAACAA 59.929 36.000 0.00 0.00 0.00 2.83
1641 1709 4.677673 AGGCATGAATATTTTCCCAAGC 57.322 40.909 0.00 0.00 0.00 4.01
1642 1710 7.149973 CACATAGGCATGAATATTTTCCCAAG 58.850 38.462 0.00 0.00 35.96 3.61
1644 1712 6.135454 ACACATAGGCATGAATATTTTCCCA 58.865 36.000 0.00 0.00 35.96 4.37
1645 1713 6.655078 ACACATAGGCATGAATATTTTCCC 57.345 37.500 0.00 0.00 35.96 3.97
1646 1714 6.925165 CCAACACATAGGCATGAATATTTTCC 59.075 38.462 0.00 0.00 35.96 3.13
1647 1715 7.436080 CACCAACACATAGGCATGAATATTTTC 59.564 37.037 0.00 0.00 35.96 2.29
1755 1932 9.455847 GATAGATTCATCAACATAGGCAAAAAC 57.544 33.333 0.00 0.00 0.00 2.43
1759 1936 8.929260 AATGATAGATTCATCAACATAGGCAA 57.071 30.769 0.00 0.00 44.51 4.52
1820 2066 7.294017 TCTGATGACATCTGCACATAGATAA 57.706 36.000 16.25 0.00 35.70 1.75
1822 2068 5.803237 TCTGATGACATCTGCACATAGAT 57.197 39.130 16.25 0.00 37.90 1.98
1883 2129 6.757237 TGTTGTTGATGCATAACCAAATTCT 58.243 32.000 0.00 0.00 0.00 2.40
2089 2337 6.560253 ATTACTCACCAACAAGTCATGAAC 57.440 37.500 0.00 0.00 0.00 3.18
2413 2664 9.412460 ACATGTATCATCATGGAAGTGTATTTT 57.588 29.630 0.00 0.00 46.39 1.82
2414 2665 8.985315 ACATGTATCATCATGGAAGTGTATTT 57.015 30.769 0.00 0.00 46.39 1.40
2415 2666 8.985315 AACATGTATCATCATGGAAGTGTATT 57.015 30.769 0.00 0.00 46.39 1.89
2416 2667 8.843262 CAAACATGTATCATCATGGAAGTGTAT 58.157 33.333 0.00 0.00 46.39 2.29
2417 2668 7.828717 ACAAACATGTATCATCATGGAAGTGTA 59.171 33.333 0.00 0.00 46.39 2.90
2418 2669 6.660521 ACAAACATGTATCATCATGGAAGTGT 59.339 34.615 0.00 6.39 46.39 3.55
2419 2670 7.092137 ACAAACATGTATCATCATGGAAGTG 57.908 36.000 0.00 5.92 46.39 3.16
2420 2671 6.885918 TGACAAACATGTATCATCATGGAAGT 59.114 34.615 0.00 5.97 46.39 3.01
2421 2672 7.066645 AGTGACAAACATGTATCATCATGGAAG 59.933 37.037 0.00 3.42 46.39 3.46
2422 2673 6.885918 AGTGACAAACATGTATCATCATGGAA 59.114 34.615 0.00 0.00 46.39 3.53
2423 2674 6.316890 CAGTGACAAACATGTATCATCATGGA 59.683 38.462 0.00 0.00 46.39 3.41
2424 2675 6.094464 ACAGTGACAAACATGTATCATCATGG 59.906 38.462 0.00 1.14 46.39 3.66
2426 2677 7.496920 CCTACAGTGACAAACATGTATCATCAT 59.503 37.037 0.00 0.00 0.00 2.45
2427 2678 6.818142 CCTACAGTGACAAACATGTATCATCA 59.182 38.462 0.00 0.00 0.00 3.07
2428 2679 6.818644 ACCTACAGTGACAAACATGTATCATC 59.181 38.462 0.00 0.00 0.00 2.92
2429 2680 6.711277 ACCTACAGTGACAAACATGTATCAT 58.289 36.000 0.00 0.00 0.00 2.45
2430 2681 6.109156 ACCTACAGTGACAAACATGTATCA 57.891 37.500 0.00 0.59 0.00 2.15
2431 2682 6.090898 GTGACCTACAGTGACAAACATGTATC 59.909 42.308 0.00 0.00 32.06 2.24
2432 2683 5.932303 GTGACCTACAGTGACAAACATGTAT 59.068 40.000 0.00 0.00 32.06 2.29
2433 2684 5.294356 GTGACCTACAGTGACAAACATGTA 58.706 41.667 0.00 0.00 32.06 2.29
2434 2685 4.127171 GTGACCTACAGTGACAAACATGT 58.873 43.478 0.00 0.00 32.06 3.21
2435 2686 3.184379 CGTGACCTACAGTGACAAACATG 59.816 47.826 0.00 0.00 31.02 3.21
2436 2687 3.181469 ACGTGACCTACAGTGACAAACAT 60.181 43.478 0.00 0.00 31.02 2.71
2437 2688 2.166870 ACGTGACCTACAGTGACAAACA 59.833 45.455 0.00 0.00 31.02 2.83
2438 2689 2.817901 ACGTGACCTACAGTGACAAAC 58.182 47.619 0.00 0.00 31.02 2.93
2439 2690 3.530265 AACGTGACCTACAGTGACAAA 57.470 42.857 0.00 0.00 31.02 2.83
2440 2691 3.530265 AAACGTGACCTACAGTGACAA 57.470 42.857 0.00 0.00 31.02 3.18
2441 2692 3.131577 AGAAAACGTGACCTACAGTGACA 59.868 43.478 0.00 0.00 31.02 3.58
2442 2693 3.489785 CAGAAAACGTGACCTACAGTGAC 59.510 47.826 0.00 0.00 0.00 3.67
2443 2694 3.131577 ACAGAAAACGTGACCTACAGTGA 59.868 43.478 0.00 0.00 0.00 3.41
2444 2695 3.454375 ACAGAAAACGTGACCTACAGTG 58.546 45.455 0.00 0.00 0.00 3.66
2445 2696 3.131577 TGACAGAAAACGTGACCTACAGT 59.868 43.478 0.00 0.00 0.00 3.55
2446 2697 3.713288 TGACAGAAAACGTGACCTACAG 58.287 45.455 0.00 0.00 0.00 2.74
2447 2698 3.804786 TGACAGAAAACGTGACCTACA 57.195 42.857 0.00 0.00 0.00 2.74
2448 2699 3.120649 GCATGACAGAAAACGTGACCTAC 60.121 47.826 0.00 0.00 0.00 3.18
2449 2700 3.064207 GCATGACAGAAAACGTGACCTA 58.936 45.455 0.00 0.00 0.00 3.08
2450 2701 1.873591 GCATGACAGAAAACGTGACCT 59.126 47.619 0.00 0.00 0.00 3.85
2451 2702 1.601903 TGCATGACAGAAAACGTGACC 59.398 47.619 0.00 0.00 0.00 4.02
2452 2703 3.228749 CATGCATGACAGAAAACGTGAC 58.771 45.455 22.59 0.00 0.00 3.67
2453 2704 2.877786 ACATGCATGACAGAAAACGTGA 59.122 40.909 32.75 0.00 0.00 4.35
2454 2705 3.272439 ACATGCATGACAGAAAACGTG 57.728 42.857 32.75 3.42 0.00 4.49
2455 2706 3.812609 TGTACATGCATGACAGAAAACGT 59.187 39.130 32.75 8.94 0.00 3.99
2456 2707 4.403015 TGTACATGCATGACAGAAAACG 57.597 40.909 32.75 2.55 0.00 3.60
2457 2708 5.106197 TGGATGTACATGCATGACAGAAAAC 60.106 40.000 32.75 18.23 34.14 2.43
2458 2709 5.008980 TGGATGTACATGCATGACAGAAAA 58.991 37.500 32.75 14.95 34.14 2.29
2459 2710 4.587891 TGGATGTACATGCATGACAGAAA 58.412 39.130 32.75 16.38 34.14 2.52
2460 2711 4.219264 TGGATGTACATGCATGACAGAA 57.781 40.909 32.75 16.67 34.14 3.02
2461 2712 3.910568 TGGATGTACATGCATGACAGA 57.089 42.857 32.75 17.85 34.14 3.41
2468 2719 5.918426 AATTTGTCATGGATGTACATGCA 57.082 34.783 29.03 29.03 46.02 3.96
2469 2720 8.136800 TCATAAATTTGTCATGGATGTACATGC 58.863 33.333 19.53 19.53 46.02 4.06
2493 2744 9.593565 ACAGGTATGACTATCTTGATTCTATCA 57.406 33.333 0.00 0.00 37.55 2.15
2494 2745 9.853555 CACAGGTATGACTATCTTGATTCTATC 57.146 37.037 0.00 0.00 0.00 2.08
2495 2746 8.310382 GCACAGGTATGACTATCTTGATTCTAT 58.690 37.037 0.00 0.00 0.00 1.98
2496 2747 7.507277 AGCACAGGTATGACTATCTTGATTCTA 59.493 37.037 0.00 0.00 0.00 2.10
2497 2748 6.326064 AGCACAGGTATGACTATCTTGATTCT 59.674 38.462 0.00 0.00 0.00 2.40
2498 2749 6.423302 CAGCACAGGTATGACTATCTTGATTC 59.577 42.308 0.00 0.00 0.00 2.52
2499 2750 6.126940 ACAGCACAGGTATGACTATCTTGATT 60.127 38.462 0.00 0.00 0.00 2.57
2500 2751 5.365025 ACAGCACAGGTATGACTATCTTGAT 59.635 40.000 0.00 0.00 0.00 2.57
2501 2752 4.711846 ACAGCACAGGTATGACTATCTTGA 59.288 41.667 0.00 0.00 0.00 3.02
2502 2753 5.016051 ACAGCACAGGTATGACTATCTTG 57.984 43.478 0.00 0.00 0.00 3.02
2503 2754 4.202060 CGACAGCACAGGTATGACTATCTT 60.202 45.833 0.00 0.00 0.00 2.40
2504 2755 3.316588 CGACAGCACAGGTATGACTATCT 59.683 47.826 0.00 0.00 0.00 1.98
2505 2756 3.066900 ACGACAGCACAGGTATGACTATC 59.933 47.826 0.00 0.00 0.00 2.08
2506 2757 3.024547 ACGACAGCACAGGTATGACTAT 58.975 45.455 0.00 0.00 0.00 2.12
2507 2758 2.443416 ACGACAGCACAGGTATGACTA 58.557 47.619 0.00 0.00 0.00 2.59
2508 2759 1.257743 ACGACAGCACAGGTATGACT 58.742 50.000 0.00 0.00 0.00 3.41
2509 2760 2.422479 TCTACGACAGCACAGGTATGAC 59.578 50.000 0.00 0.00 0.00 3.06
2510 2761 2.718563 TCTACGACAGCACAGGTATGA 58.281 47.619 0.00 0.00 0.00 2.15
2511 2762 3.119459 ACTTCTACGACAGCACAGGTATG 60.119 47.826 0.00 0.00 0.00 2.39
2512 2763 3.090037 ACTTCTACGACAGCACAGGTAT 58.910 45.455 0.00 0.00 0.00 2.73
2513 2764 2.228103 CACTTCTACGACAGCACAGGTA 59.772 50.000 0.00 0.00 0.00 3.08
2514 2765 1.000163 CACTTCTACGACAGCACAGGT 60.000 52.381 0.00 0.00 0.00 4.00
2515 2766 1.000163 ACACTTCTACGACAGCACAGG 60.000 52.381 0.00 0.00 0.00 4.00
2516 2767 2.423926 ACACTTCTACGACAGCACAG 57.576 50.000 0.00 0.00 0.00 3.66
2517 2768 2.545113 GGAACACTTCTACGACAGCACA 60.545 50.000 0.00 0.00 0.00 4.57
2518 2769 2.059541 GGAACACTTCTACGACAGCAC 58.940 52.381 0.00 0.00 0.00 4.40
2519 2770 1.684450 TGGAACACTTCTACGACAGCA 59.316 47.619 0.00 0.00 0.00 4.41
2520 2771 2.433868 TGGAACACTTCTACGACAGC 57.566 50.000 0.00 0.00 0.00 4.40
2536 2787 9.418839 TGATGATAATTTTGGTAATGTCATGGA 57.581 29.630 0.00 0.00 0.00 3.41
2537 2788 9.467258 GTGATGATAATTTTGGTAATGTCATGG 57.533 33.333 0.00 0.00 0.00 3.66
2538 2789 9.172820 CGTGATGATAATTTTGGTAATGTCATG 57.827 33.333 0.00 0.00 0.00 3.07
2539 2790 8.352201 CCGTGATGATAATTTTGGTAATGTCAT 58.648 33.333 0.00 0.00 0.00 3.06
2540 2791 7.554476 TCCGTGATGATAATTTTGGTAATGTCA 59.446 33.333 0.00 0.00 0.00 3.58
2541 2792 7.925993 TCCGTGATGATAATTTTGGTAATGTC 58.074 34.615 0.00 0.00 0.00 3.06
2542 2793 7.873719 TCCGTGATGATAATTTTGGTAATGT 57.126 32.000 0.00 0.00 0.00 2.71
2543 2794 8.405531 ACTTCCGTGATGATAATTTTGGTAATG 58.594 33.333 0.00 0.00 0.00 1.90
2544 2795 8.405531 CACTTCCGTGATGATAATTTTGGTAAT 58.594 33.333 0.00 0.00 43.97 1.89
2545 2796 7.392113 ACACTTCCGTGATGATAATTTTGGTAA 59.608 33.333 0.00 0.00 43.97 2.85
2546 2797 6.882140 ACACTTCCGTGATGATAATTTTGGTA 59.118 34.615 0.00 0.00 43.97 3.25
2547 2798 5.710099 ACACTTCCGTGATGATAATTTTGGT 59.290 36.000 0.00 0.00 43.97 3.67
2548 2799 6.194796 ACACTTCCGTGATGATAATTTTGG 57.805 37.500 0.00 0.00 43.97 3.28
2549 2800 6.128035 TGGACACTTCCGTGATGATAATTTTG 60.128 38.462 0.00 0.00 46.37 2.44
2550 2801 5.943416 TGGACACTTCCGTGATGATAATTTT 59.057 36.000 0.00 0.00 46.37 1.82
2551 2802 5.354234 GTGGACACTTCCGTGATGATAATTT 59.646 40.000 0.00 0.00 46.37 1.82
2552 2803 4.876107 GTGGACACTTCCGTGATGATAATT 59.124 41.667 0.00 0.00 46.37 1.40
2553 2804 4.162320 AGTGGACACTTCCGTGATGATAAT 59.838 41.667 0.00 0.00 46.37 1.28
2554 2805 3.513912 AGTGGACACTTCCGTGATGATAA 59.486 43.478 0.00 0.00 46.37 1.75
2555 2806 3.096852 AGTGGACACTTCCGTGATGATA 58.903 45.455 0.00 0.00 46.37 2.15
2556 2807 1.902508 AGTGGACACTTCCGTGATGAT 59.097 47.619 0.00 0.00 46.37 2.45
2557 2808 1.338107 AGTGGACACTTCCGTGATGA 58.662 50.000 0.00 0.00 46.37 2.92
2558 2809 3.914984 AGTGGACACTTCCGTGATG 57.085 52.632 0.00 0.00 46.37 3.07
2567 2818 5.698741 TTATCATCATGGAAGTGGACACT 57.301 39.130 0.00 0.00 44.94 3.55
2568 2819 6.293081 CGATTTATCATCATGGAAGTGGACAC 60.293 42.308 0.00 0.00 0.00 3.67
2569 2820 5.759763 CGATTTATCATCATGGAAGTGGACA 59.240 40.000 0.00 0.00 0.00 4.02
2570 2821 5.334414 GCGATTTATCATCATGGAAGTGGAC 60.334 44.000 0.00 0.00 0.00 4.02
2571 2822 4.756642 GCGATTTATCATCATGGAAGTGGA 59.243 41.667 0.00 0.00 0.00 4.02
2572 2823 4.377738 CGCGATTTATCATCATGGAAGTGG 60.378 45.833 0.00 0.00 0.00 4.00
2573 2824 4.705492 CGCGATTTATCATCATGGAAGTG 58.295 43.478 0.00 0.00 0.00 3.16
2574 2825 3.187227 GCGCGATTTATCATCATGGAAGT 59.813 43.478 12.10 0.00 0.00 3.01
2575 2826 3.722957 CGCGCGATTTATCATCATGGAAG 60.723 47.826 28.94 0.00 0.00 3.46
2576 2827 2.157474 CGCGCGATTTATCATCATGGAA 59.843 45.455 28.94 0.00 0.00 3.53
2577 2828 1.726248 CGCGCGATTTATCATCATGGA 59.274 47.619 28.94 0.00 0.00 3.41
2578 2829 1.460743 ACGCGCGATTTATCATCATGG 59.539 47.619 39.36 0.67 0.00 3.66
2579 2830 2.155539 TGACGCGCGATTTATCATCATG 59.844 45.455 39.36 1.45 0.00 3.07
2580 2831 2.155732 GTGACGCGCGATTTATCATCAT 59.844 45.455 39.36 9.23 0.00 2.45
2581 2832 1.521006 GTGACGCGCGATTTATCATCA 59.479 47.619 39.36 23.64 0.00 3.07
2582 2833 1.521006 TGTGACGCGCGATTTATCATC 59.479 47.619 39.36 21.10 0.00 2.92
2583 2834 1.522676 CTGTGACGCGCGATTTATCAT 59.477 47.619 39.36 11.73 0.00 2.45
2584 2835 0.920664 CTGTGACGCGCGATTTATCA 59.079 50.000 39.36 26.03 0.00 2.15
2585 2836 1.197055 TCTGTGACGCGCGATTTATC 58.803 50.000 39.36 23.49 0.00 1.75
2586 2837 1.588404 CTTCTGTGACGCGCGATTTAT 59.412 47.619 39.36 14.54 0.00 1.40
2587 2838 0.989164 CTTCTGTGACGCGCGATTTA 59.011 50.000 39.36 18.32 0.00 1.40
2588 2839 0.944311 ACTTCTGTGACGCGCGATTT 60.944 50.000 39.36 15.50 0.00 2.17
2589 2840 1.372997 ACTTCTGTGACGCGCGATT 60.373 52.632 39.36 16.45 0.00 3.34
2590 2841 2.088763 CACTTCTGTGACGCGCGAT 61.089 57.895 39.36 21.24 46.55 4.58
2591 2842 2.729491 CACTTCTGTGACGCGCGA 60.729 61.111 39.36 13.15 46.55 5.87
2592 2843 4.415501 GCACTTCTGTGACGCGCG 62.416 66.667 30.96 30.96 46.55 6.86
2593 2844 2.105960 AAAGCACTTCTGTGACGCGC 62.106 55.000 5.73 0.00 46.55 6.86
2594 2845 0.111089 GAAAGCACTTCTGTGACGCG 60.111 55.000 3.53 3.53 46.55 6.01
2595 2846 0.111089 CGAAAGCACTTCTGTGACGC 60.111 55.000 0.00 0.00 46.55 5.19
2596 2847 1.190323 GACGAAAGCACTTCTGTGACG 59.810 52.381 0.00 0.00 46.55 4.35
2597 2848 2.201732 TGACGAAAGCACTTCTGTGAC 58.798 47.619 0.00 0.00 46.55 3.67
2598 2849 2.595124 TGACGAAAGCACTTCTGTGA 57.405 45.000 0.00 0.00 46.55 3.58
2599 2850 2.032549 CCTTGACGAAAGCACTTCTGTG 60.033 50.000 0.00 0.00 46.37 3.66
2600 2851 2.213499 CCTTGACGAAAGCACTTCTGT 58.787 47.619 0.00 0.00 34.24 3.41
2601 2852 1.532868 CCCTTGACGAAAGCACTTCTG 59.467 52.381 0.00 0.00 34.24 3.02
2602 2853 1.141053 ACCCTTGACGAAAGCACTTCT 59.859 47.619 0.00 0.00 34.24 2.85
2603 2854 1.264288 CACCCTTGACGAAAGCACTTC 59.736 52.381 0.00 0.00 34.24 3.01
2604 2855 1.134220 TCACCCTTGACGAAAGCACTT 60.134 47.619 0.00 0.00 34.24 3.16
2605 2856 0.468226 TCACCCTTGACGAAAGCACT 59.532 50.000 0.00 0.00 34.24 4.40
2606 2857 0.586802 GTCACCCTTGACGAAAGCAC 59.413 55.000 0.00 0.00 42.86 4.40
2607 2858 3.000815 GTCACCCTTGACGAAAGCA 57.999 52.632 0.00 0.00 42.86 3.91
2615 2866 0.034756 CATGTGTCGGTCACCCTTGA 59.965 55.000 3.03 0.00 45.61 3.02
2616 2867 0.955428 CCATGTGTCGGTCACCCTTG 60.955 60.000 3.03 0.00 45.61 3.61
2617 2868 1.374947 CCATGTGTCGGTCACCCTT 59.625 57.895 3.03 0.00 45.61 3.95
2618 2869 3.068881 CCATGTGTCGGTCACCCT 58.931 61.111 3.03 0.00 45.61 4.34
2619 2870 2.746277 GCCATGTGTCGGTCACCC 60.746 66.667 3.03 0.00 45.61 4.61
2620 2871 1.369091 GATGCCATGTGTCGGTCACC 61.369 60.000 3.03 0.00 45.61 4.02
2621 2872 1.369091 GGATGCCATGTGTCGGTCAC 61.369 60.000 0.00 0.00 46.31 3.67
2622 2873 1.078497 GGATGCCATGTGTCGGTCA 60.078 57.895 0.00 0.00 0.00 4.02
2623 2874 1.078497 TGGATGCCATGTGTCGGTC 60.078 57.895 0.00 0.00 0.00 4.79
2624 2875 1.377202 GTGGATGCCATGTGTCGGT 60.377 57.895 0.00 0.00 35.28 4.69
2625 2876 2.114670 GGTGGATGCCATGTGTCGG 61.115 63.158 0.00 0.00 35.28 4.79
2626 2877 2.463620 CGGTGGATGCCATGTGTCG 61.464 63.158 0.00 0.00 35.28 4.35
2627 2878 0.107897 TACGGTGGATGCCATGTGTC 60.108 55.000 0.00 0.00 35.28 3.67
2628 2879 0.326595 TTACGGTGGATGCCATGTGT 59.673 50.000 0.00 0.00 35.28 3.72
2629 2880 0.732571 GTTACGGTGGATGCCATGTG 59.267 55.000 0.00 0.00 35.28 3.21
2630 2881 0.742990 CGTTACGGTGGATGCCATGT 60.743 55.000 0.00 0.00 35.28 3.21
2631 2882 1.436195 CCGTTACGGTGGATGCCATG 61.436 60.000 16.53 0.00 42.73 3.66
2632 2883 1.153249 CCGTTACGGTGGATGCCAT 60.153 57.895 16.53 0.00 42.73 4.40
2633 2884 2.266372 CCGTTACGGTGGATGCCA 59.734 61.111 16.53 0.00 42.73 4.92
2649 2900 0.850856 CGATAGCTTAACGGCGTTCC 59.149 55.000 30.35 18.01 37.29 3.62
2650 2901 0.850856 CCGATAGCTTAACGGCGTTC 59.149 55.000 30.35 15.28 40.19 3.95
2651 2902 0.529119 CCCGATAGCTTAACGGCGTT 60.529 55.000 29.36 29.36 44.45 4.84
2652 2903 1.066918 CCCGATAGCTTAACGGCGT 59.933 57.895 6.77 6.77 44.45 5.68
2653 2904 0.938168 GACCCGATAGCTTAACGGCG 60.938 60.000 4.80 4.80 44.45 6.46
2654 2905 0.599466 GGACCCGATAGCTTAACGGC 60.599 60.000 16.64 7.38 44.45 5.68
2655 2906 0.318445 CGGACCCGATAGCTTAACGG 60.318 60.000 15.59 15.59 45.24 4.44
2656 2907 0.318445 CCGGACCCGATAGCTTAACG 60.318 60.000 10.42 0.00 42.83 3.18
2657 2908 0.749049 ACCGGACCCGATAGCTTAAC 59.251 55.000 9.46 0.00 42.83 2.01
2658 2909 1.488390 AACCGGACCCGATAGCTTAA 58.512 50.000 9.46 0.00 42.83 1.85
2659 2910 1.488390 AAACCGGACCCGATAGCTTA 58.512 50.000 9.46 0.00 42.83 3.09
2660 2911 0.616891 AAAACCGGACCCGATAGCTT 59.383 50.000 9.46 0.00 42.83 3.74
2661 2912 0.107848 CAAAACCGGACCCGATAGCT 60.108 55.000 9.46 0.00 42.83 3.32
2662 2913 1.093496 CCAAAACCGGACCCGATAGC 61.093 60.000 9.46 0.00 42.83 2.97
2663 2914 0.538118 TCCAAAACCGGACCCGATAG 59.462 55.000 9.46 0.00 42.83 2.08
2664 2915 1.139455 GATCCAAAACCGGACCCGATA 59.861 52.381 9.46 0.00 42.83 2.92
2665 2916 0.107361 GATCCAAAACCGGACCCGAT 60.107 55.000 9.46 1.54 42.83 4.18
2666 2917 1.297364 GATCCAAAACCGGACCCGA 59.703 57.895 9.46 0.00 42.83 5.14
2667 2918 1.747745 GGATCCAAAACCGGACCCG 60.748 63.158 9.46 0.66 38.07 5.28
2668 2919 1.747745 CGGATCCAAAACCGGACCC 60.748 63.158 9.46 0.00 44.59 4.46
2669 2920 3.899395 CGGATCCAAAACCGGACC 58.101 61.111 9.46 0.00 44.59 4.46
2673 2924 3.628662 CGGGTTATCGGATCCAAAACCG 61.629 54.545 25.07 25.07 44.79 4.44
2674 2925 1.944709 CGGGTTATCGGATCCAAAACC 59.055 52.381 22.91 22.91 39.09 3.27
2675 2926 2.635714 ACGGGTTATCGGATCCAAAAC 58.364 47.619 13.41 11.86 0.00 2.43
2676 2927 3.353370 AACGGGTTATCGGATCCAAAA 57.647 42.857 13.41 0.00 0.00 2.44
2677 2928 4.190772 GTTAACGGGTTATCGGATCCAAA 58.809 43.478 13.41 0.00 0.00 3.28
2678 2929 3.197333 TGTTAACGGGTTATCGGATCCAA 59.803 43.478 13.41 0.00 0.00 3.53
2679 2930 2.765135 TGTTAACGGGTTATCGGATCCA 59.235 45.455 13.41 0.00 0.00 3.41
2680 2931 3.387397 CTGTTAACGGGTTATCGGATCC 58.613 50.000 6.53 0.00 0.00 3.36
2681 2932 2.798847 GCTGTTAACGGGTTATCGGATC 59.201 50.000 16.13 0.00 0.00 3.36
2682 2933 2.484241 GGCTGTTAACGGGTTATCGGAT 60.484 50.000 16.13 0.00 0.00 4.18
2683 2934 1.134729 GGCTGTTAACGGGTTATCGGA 60.135 52.381 16.13 0.00 0.00 4.55
2684 2935 1.292992 GGCTGTTAACGGGTTATCGG 58.707 55.000 16.13 4.75 0.00 4.18
2685 2936 1.292992 GGGCTGTTAACGGGTTATCG 58.707 55.000 16.13 0.00 0.00 2.92
2686 2937 1.671979 GGGGCTGTTAACGGGTTATC 58.328 55.000 16.13 0.00 0.00 1.75
2687 2938 0.107557 CGGGGCTGTTAACGGGTTAT 60.108 55.000 16.13 0.00 0.00 1.89
2688 2939 1.190833 TCGGGGCTGTTAACGGGTTA 61.191 55.000 16.13 0.00 0.00 2.85
2689 2940 2.032987 CGGGGCTGTTAACGGGTT 59.967 61.111 16.13 0.00 0.00 4.11
2690 2941 2.924101 TCGGGGCTGTTAACGGGT 60.924 61.111 16.13 0.00 0.00 5.28
2691 2942 2.435410 GTCGGGGCTGTTAACGGG 60.435 66.667 16.13 5.39 0.00 5.28
2692 2943 2.435410 GGTCGGGGCTGTTAACGG 60.435 66.667 10.24 10.24 0.00 4.44
2693 2944 0.675522 ATTGGTCGGGGCTGTTAACG 60.676 55.000 0.26 0.00 0.00 3.18
2694 2945 0.808755 CATTGGTCGGGGCTGTTAAC 59.191 55.000 0.00 0.00 0.00 2.01
2695 2946 0.322997 CCATTGGTCGGGGCTGTTAA 60.323 55.000 0.00 0.00 0.00 2.01
2696 2947 1.301623 CCATTGGTCGGGGCTGTTA 59.698 57.895 0.00 0.00 0.00 2.41
2697 2948 2.035626 CCATTGGTCGGGGCTGTT 59.964 61.111 0.00 0.00 0.00 3.16
2698 2949 4.047125 CCCATTGGTCGGGGCTGT 62.047 66.667 1.20 0.00 40.35 4.40
2703 2954 1.111277 GAAAATCCCCATTGGTCGGG 58.889 55.000 1.20 0.00 44.07 5.14
2704 2955 1.111277 GGAAAATCCCCATTGGTCGG 58.889 55.000 1.20 0.00 34.77 4.79
2705 2956 1.476488 GTGGAAAATCCCCATTGGTCG 59.524 52.381 1.20 0.00 35.03 4.79
2706 2957 2.534990 TGTGGAAAATCCCCATTGGTC 58.465 47.619 1.20 0.00 35.03 4.02
2707 2958 2.711895 TGTGGAAAATCCCCATTGGT 57.288 45.000 1.20 0.00 35.03 3.67
2708 2959 2.839425 ACATGTGGAAAATCCCCATTGG 59.161 45.455 0.00 0.00 35.03 3.16
2709 2960 5.674052 TTACATGTGGAAAATCCCCATTG 57.326 39.130 9.11 0.00 35.03 2.82
2710 2961 6.694445 TTTTACATGTGGAAAATCCCCATT 57.306 33.333 9.11 0.00 35.03 3.16
2711 2962 6.443206 TGATTTTACATGTGGAAAATCCCCAT 59.557 34.615 28.04 8.74 35.03 4.00
2712 2963 5.782331 TGATTTTACATGTGGAAAATCCCCA 59.218 36.000 28.04 16.77 35.03 4.96
2713 2964 6.293004 TGATTTTACATGTGGAAAATCCCC 57.707 37.500 28.04 15.16 35.03 4.81
2714 2965 7.555087 TGATGATTTTACATGTGGAAAATCCC 58.445 34.615 28.04 22.76 35.03 3.85
2715 2966 9.603921 AATGATGATTTTACATGTGGAAAATCC 57.396 29.630 28.04 19.95 36.96 3.01
2717 2968 9.386010 CCAATGATGATTTTACATGTGGAAAAT 57.614 29.630 15.86 15.86 31.06 1.82
2718 2969 7.333921 GCCAATGATGATTTTACATGTGGAAAA 59.666 33.333 9.11 8.78 31.06 2.29
2719 2970 6.817641 GCCAATGATGATTTTACATGTGGAAA 59.182 34.615 9.11 9.93 31.06 3.13
2720 2971 6.154877 AGCCAATGATGATTTTACATGTGGAA 59.845 34.615 9.11 3.29 31.06 3.53
2721 2972 5.657745 AGCCAATGATGATTTTACATGTGGA 59.342 36.000 9.11 0.00 31.06 4.02
2722 2973 5.751509 CAGCCAATGATGATTTTACATGTGG 59.248 40.000 9.11 0.00 0.00 4.17
2723 2974 5.751509 CCAGCCAATGATGATTTTACATGTG 59.248 40.000 9.11 0.00 0.00 3.21
2724 2975 5.657745 TCCAGCCAATGATGATTTTACATGT 59.342 36.000 2.69 2.69 0.00 3.21
2725 2976 6.151663 TCCAGCCAATGATGATTTTACATG 57.848 37.500 0.00 0.00 0.00 3.21
2726 2977 5.303589 CCTCCAGCCAATGATGATTTTACAT 59.696 40.000 0.00 0.00 0.00 2.29
2727 2978 4.646040 CCTCCAGCCAATGATGATTTTACA 59.354 41.667 0.00 0.00 0.00 2.41
2728 2979 4.889409 TCCTCCAGCCAATGATGATTTTAC 59.111 41.667 0.00 0.00 0.00 2.01
2729 2980 5.128033 TCCTCCAGCCAATGATGATTTTA 57.872 39.130 0.00 0.00 0.00 1.52
2730 2981 3.985127 TCCTCCAGCCAATGATGATTTT 58.015 40.909 0.00 0.00 0.00 1.82
2731 2982 3.675348 TCCTCCAGCCAATGATGATTT 57.325 42.857 0.00 0.00 0.00 2.17
2732 2983 3.675348 TTCCTCCAGCCAATGATGATT 57.325 42.857 0.00 0.00 0.00 2.57
2733 2984 3.294214 GTTTCCTCCAGCCAATGATGAT 58.706 45.455 0.00 0.00 0.00 2.45
2734 2985 2.041485 TGTTTCCTCCAGCCAATGATGA 59.959 45.455 0.00 0.00 0.00 2.92
2735 2986 2.165030 GTGTTTCCTCCAGCCAATGATG 59.835 50.000 0.00 0.00 0.00 3.07
2736 2987 2.450476 GTGTTTCCTCCAGCCAATGAT 58.550 47.619 0.00 0.00 0.00 2.45
2737 2988 1.881925 CGTGTTTCCTCCAGCCAATGA 60.882 52.381 0.00 0.00 0.00 2.57
2738 2989 0.523072 CGTGTTTCCTCCAGCCAATG 59.477 55.000 0.00 0.00 0.00 2.82
2739 2990 0.110486 ACGTGTTTCCTCCAGCCAAT 59.890 50.000 0.00 0.00 0.00 3.16
2740 2991 0.817634 CACGTGTTTCCTCCAGCCAA 60.818 55.000 7.58 0.00 0.00 4.52
2741 2992 1.227823 CACGTGTTTCCTCCAGCCA 60.228 57.895 7.58 0.00 0.00 4.75
2742 2993 2.617274 GCACGTGTTTCCTCCAGCC 61.617 63.158 18.38 0.00 0.00 4.85
2743 2994 2.617274 GGCACGTGTTTCCTCCAGC 61.617 63.158 18.38 0.00 0.00 4.85
2744 2995 3.655481 GGCACGTGTTTCCTCCAG 58.345 61.111 18.38 0.00 0.00 3.86
2762 3013 2.668550 GTGTCCCAACGGTGAGCC 60.669 66.667 0.00 0.00 0.00 4.70
2763 3014 1.302511 ATGTGTCCCAACGGTGAGC 60.303 57.895 0.00 0.00 0.00 4.26
2764 3015 1.577328 GCATGTGTCCCAACGGTGAG 61.577 60.000 0.00 0.00 0.00 3.51
2765 3016 1.599518 GCATGTGTCCCAACGGTGA 60.600 57.895 0.00 0.00 0.00 4.02
2766 3017 2.625823 GGCATGTGTCCCAACGGTG 61.626 63.158 0.00 0.00 0.00 4.94
2767 3018 2.282180 GGCATGTGTCCCAACGGT 60.282 61.111 0.00 0.00 0.00 4.83
2768 3019 1.656818 GATGGCATGTGTCCCAACGG 61.657 60.000 3.81 0.00 34.25 4.44
2769 3020 1.656818 GGATGGCATGTGTCCCAACG 61.657 60.000 3.81 0.00 34.25 4.10
2770 3021 0.611618 TGGATGGCATGTGTCCCAAC 60.612 55.000 3.81 1.01 34.25 3.77
2771 3022 0.611618 GTGGATGGCATGTGTCCCAA 60.612 55.000 3.81 0.00 34.25 4.12
2772 3023 1.001020 GTGGATGGCATGTGTCCCA 60.001 57.895 3.81 2.10 35.21 4.37
2773 3024 0.749454 GAGTGGATGGCATGTGTCCC 60.749 60.000 3.81 0.00 0.00 4.46
2774 3025 0.035152 TGAGTGGATGGCATGTGTCC 60.035 55.000 3.81 0.19 0.00 4.02
2775 3026 2.048444 ATGAGTGGATGGCATGTGTC 57.952 50.000 3.81 0.00 0.00 3.67
2776 3027 2.097036 CAATGAGTGGATGGCATGTGT 58.903 47.619 3.81 0.00 0.00 3.72
2777 3028 2.863401 CAATGAGTGGATGGCATGTG 57.137 50.000 3.81 0.00 0.00 3.21
2788 3039 1.664016 GCGCTTTGTGTCCAATGAGTG 60.664 52.381 0.00 0.00 31.20 3.51
2789 3040 0.593128 GCGCTTTGTGTCCAATGAGT 59.407 50.000 0.00 0.00 31.20 3.41
2790 3041 0.109597 GGCGCTTTGTGTCCAATGAG 60.110 55.000 7.64 0.00 0.00 2.90
2791 3042 0.537143 AGGCGCTTTGTGTCCAATGA 60.537 50.000 7.64 0.00 0.00 2.57
2792 3043 1.164411 TAGGCGCTTTGTGTCCAATG 58.836 50.000 7.64 0.00 0.00 2.82
2793 3044 1.745087 CATAGGCGCTTTGTGTCCAAT 59.255 47.619 7.64 0.00 0.00 3.16
2794 3045 1.164411 CATAGGCGCTTTGTGTCCAA 58.836 50.000 7.64 0.00 0.00 3.53
2795 3046 0.323302 TCATAGGCGCTTTGTGTCCA 59.677 50.000 7.64 0.00 0.00 4.02
2796 3047 1.668419 ATCATAGGCGCTTTGTGTCC 58.332 50.000 7.64 0.00 0.00 4.02
2797 3048 2.218759 CGTATCATAGGCGCTTTGTGTC 59.781 50.000 7.64 0.00 0.00 3.67
2798 3049 2.201732 CGTATCATAGGCGCTTTGTGT 58.798 47.619 7.64 0.00 0.00 3.72
2799 3050 2.201732 ACGTATCATAGGCGCTTTGTG 58.798 47.619 7.64 5.07 0.00 3.33
2800 3051 2.470821 GACGTATCATAGGCGCTTTGT 58.529 47.619 7.64 0.00 0.00 2.83
2801 3052 1.452025 CGACGTATCATAGGCGCTTTG 59.548 52.381 7.64 2.62 0.00 2.77
2802 3053 1.335810 TCGACGTATCATAGGCGCTTT 59.664 47.619 7.64 0.00 0.00 3.51
2803 3054 0.949397 TCGACGTATCATAGGCGCTT 59.051 50.000 7.64 0.52 0.00 4.68
2804 3055 1.166129 ATCGACGTATCATAGGCGCT 58.834 50.000 7.64 0.00 0.00 5.92
2805 3056 2.438583 GTATCGACGTATCATAGGCGC 58.561 52.381 0.00 0.00 0.00 6.53
2806 3057 2.690735 CGTATCGACGTATCATAGGCG 58.309 52.381 0.00 0.00 44.31 5.52
2818 3069 3.252484 GCCGTGCCACGTATCGAC 61.252 66.667 16.99 0.00 40.58 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.