Multiple sequence alignment - TraesCS5D01G206400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G206400 chr5D 100.000 4729 0 0 1 4729 312453954 312449226 0.000000e+00 8733.0
1 TraesCS5D01G206400 chr5D 91.410 780 43 8 6 761 26617304 26618083 0.000000e+00 1048.0
2 TraesCS5D01G206400 chr5D 90.956 774 51 7 6 761 514982502 514983274 0.000000e+00 1024.0
3 TraesCS5D01G206400 chr5D 88.281 768 72 11 6 761 339865209 339864448 0.000000e+00 904.0
4 TraesCS5D01G206400 chr5D 74.074 162 37 4 767 928 375754582 375754426 1.420000e-05 62.1
5 TraesCS5D01G206400 chr5A 89.737 2699 147 55 219 2861 406538306 406535682 0.000000e+00 3330.0
6 TraesCS5D01G206400 chr5A 88.158 1064 88 18 3411 4444 406534997 406533942 0.000000e+00 1232.0
7 TraesCS5D01G206400 chr5A 91.547 627 42 4 155 772 668587364 668586740 0.000000e+00 854.0
8 TraesCS5D01G206400 chr5A 92.958 497 33 2 2862 3358 406535632 406535138 0.000000e+00 723.0
9 TraesCS5D01G206400 chr5A 87.442 215 19 7 4519 4729 476227509 476227719 1.700000e-59 241.0
10 TraesCS5D01G206400 chr5B 93.902 1443 68 11 764 2202 358894526 358893100 0.000000e+00 2159.0
11 TraesCS5D01G206400 chr5B 89.227 1281 76 26 2858 4088 358892430 358891162 0.000000e+00 1544.0
12 TraesCS5D01G206400 chr5B 90.252 636 29 12 2245 2861 358893094 358892473 0.000000e+00 800.0
13 TraesCS5D01G206400 chr5B 80.342 117 9 1 4226 4328 598979893 598979777 5.070000e-10 76.8
14 TraesCS5D01G206400 chr5B 85.507 69 10 0 4281 4349 441690603 441690535 6.560000e-09 73.1
15 TraesCS5D01G206400 chr1D 92.670 764 48 3 6 761 389788418 389789181 0.000000e+00 1094.0
16 TraesCS5D01G206400 chr2D 91.602 774 48 4 6 762 99499320 99500093 0.000000e+00 1053.0
17 TraesCS5D01G206400 chr2D 91.473 774 49 7 6 763 365262269 365263041 0.000000e+00 1048.0
18 TraesCS5D01G206400 chr3D 90.851 776 49 8 2 762 578444729 578445497 0.000000e+00 1020.0
19 TraesCS5D01G206400 chr3D 83.916 143 21 2 4523 4664 6037455 6037314 8.250000e-28 135.0
20 TraesCS5D01G206400 chr3D 89.091 55 6 0 4277 4331 365325834 365325780 8.490000e-08 69.4
21 TraesCS5D01G206400 chr4D 90.470 766 60 10 6 761 70663164 70662402 0.000000e+00 998.0
22 TraesCS5D01G206400 chr4D 88.832 779 50 11 6 761 480327522 480328286 0.000000e+00 922.0
23 TraesCS5D01G206400 chr2B 89.872 780 58 12 1 762 774505805 774505029 0.000000e+00 983.0
24 TraesCS5D01G206400 chr7D 89.744 780 54 5 6 761 612859238 612858461 0.000000e+00 974.0
25 TraesCS5D01G206400 chr7D 95.290 552 26 0 1 552 481621066 481620515 0.000000e+00 876.0
26 TraesCS5D01G206400 chr7D 85.795 352 36 7 426 763 591304386 591304035 1.250000e-95 361.0
27 TraesCS5D01G206400 chr7A 89.704 777 60 8 4 761 101870687 101871462 0.000000e+00 974.0
28 TraesCS5D01G206400 chr7A 83.929 280 32 8 493 761 65440039 65440316 6.070000e-64 255.0
29 TraesCS5D01G206400 chr7A 87.204 211 27 0 4519 4729 5486329 5486539 1.700000e-59 241.0
30 TraesCS5D01G206400 chr7A 90.625 64 6 0 4658 4721 377634614 377634677 8.430000e-13 86.1
31 TraesCS5D01G206400 chr4A 90.523 707 57 8 4 702 552630498 552629794 0.000000e+00 926.0
32 TraesCS5D01G206400 chr2A 91.429 595 39 2 6 597 59896262 59895677 0.000000e+00 806.0
33 TraesCS5D01G206400 chr2A 87.204 211 18 2 4519 4729 705593576 705593375 1.020000e-56 231.0
34 TraesCS5D01G206400 chr3B 82.128 235 40 1 4277 4509 100976166 100976400 2.890000e-47 200.0
35 TraesCS5D01G206400 chr3B 78.205 234 49 2 4278 4509 669751908 669752141 1.060000e-31 148.0
36 TraesCS5D01G206400 chr3B 78.788 165 24 8 770 932 119060684 119060839 3.010000e-17 100.0
37 TraesCS5D01G206400 chr1A 82.727 220 28 3 4519 4729 483132589 483132371 2.250000e-43 187.0
38 TraesCS5D01G206400 chr3A 82.126 207 26 6 4523 4729 594033005 594032810 2.930000e-37 167.0
39 TraesCS5D01G206400 chr6D 91.304 115 10 0 4615 4729 17203236 17203350 1.760000e-34 158.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G206400 chr5D 312449226 312453954 4728 True 8733.000000 8733 100.000000 1 4729 1 chr5D.!!$R1 4728
1 TraesCS5D01G206400 chr5D 26617304 26618083 779 False 1048.000000 1048 91.410000 6 761 1 chr5D.!!$F1 755
2 TraesCS5D01G206400 chr5D 514982502 514983274 772 False 1024.000000 1024 90.956000 6 761 1 chr5D.!!$F2 755
3 TraesCS5D01G206400 chr5D 339864448 339865209 761 True 904.000000 904 88.281000 6 761 1 chr5D.!!$R2 755
4 TraesCS5D01G206400 chr5A 406533942 406538306 4364 True 1761.666667 3330 90.284333 219 4444 3 chr5A.!!$R2 4225
5 TraesCS5D01G206400 chr5A 668586740 668587364 624 True 854.000000 854 91.547000 155 772 1 chr5A.!!$R1 617
6 TraesCS5D01G206400 chr5B 358891162 358894526 3364 True 1501.000000 2159 91.127000 764 4088 3 chr5B.!!$R3 3324
7 TraesCS5D01G206400 chr1D 389788418 389789181 763 False 1094.000000 1094 92.670000 6 761 1 chr1D.!!$F1 755
8 TraesCS5D01G206400 chr2D 99499320 99500093 773 False 1053.000000 1053 91.602000 6 762 1 chr2D.!!$F1 756
9 TraesCS5D01G206400 chr2D 365262269 365263041 772 False 1048.000000 1048 91.473000 6 763 1 chr2D.!!$F2 757
10 TraesCS5D01G206400 chr3D 578444729 578445497 768 False 1020.000000 1020 90.851000 2 762 1 chr3D.!!$F1 760
11 TraesCS5D01G206400 chr4D 70662402 70663164 762 True 998.000000 998 90.470000 6 761 1 chr4D.!!$R1 755
12 TraesCS5D01G206400 chr4D 480327522 480328286 764 False 922.000000 922 88.832000 6 761 1 chr4D.!!$F1 755
13 TraesCS5D01G206400 chr2B 774505029 774505805 776 True 983.000000 983 89.872000 1 762 1 chr2B.!!$R1 761
14 TraesCS5D01G206400 chr7D 612858461 612859238 777 True 974.000000 974 89.744000 6 761 1 chr7D.!!$R3 755
15 TraesCS5D01G206400 chr7D 481620515 481621066 551 True 876.000000 876 95.290000 1 552 1 chr7D.!!$R1 551
16 TraesCS5D01G206400 chr7A 101870687 101871462 775 False 974.000000 974 89.704000 4 761 1 chr7A.!!$F3 757
17 TraesCS5D01G206400 chr4A 552629794 552630498 704 True 926.000000 926 90.523000 4 702 1 chr4A.!!$R1 698
18 TraesCS5D01G206400 chr2A 59895677 59896262 585 True 806.000000 806 91.429000 6 597 1 chr2A.!!$R1 591

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
720 756 0.039708 GTACCCCGCGCTACTGATAC 60.040 60.0 5.56 0.00 0.00 2.24 F
1769 1809 0.237498 GGTTTACGAACTGCAGTGGC 59.763 55.0 22.49 14.78 36.03 5.01 F
3181 3300 0.105039 GGTATTGCTGCTAGTCGCCT 59.895 55.0 0.00 0.00 38.05 5.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2142 2189 0.386478 CTTCGCAGTTGCAGAAAGGC 60.386 55.0 4.84 0.00 42.21 4.35 R
3184 3303 0.529119 GTCGGTTACTACGGCCATGG 60.529 60.0 7.63 7.63 0.00 3.66 R
4592 4828 0.028433 CCCACCCCCTCCCCTATTAA 60.028 60.0 0.00 0.00 0.00 1.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 69 6.656270 AGTTTGAAGATGATGATGTGCTACAA 59.344 34.615 0.00 0.00 0.00 2.41
117 119 5.296780 GTGTTGGTGGTAATGACTATGATGG 59.703 44.000 0.00 0.00 0.00 3.51
246 253 6.038936 TGGTGATGATATGATGCAAGAGTTTG 59.961 38.462 0.00 0.00 37.36 2.93
354 361 2.096218 GGAACGCGGATTAGATTCATGC 60.096 50.000 12.47 0.00 0.00 4.06
423 430 8.454106 CGTCCTAATTCAACTTTTGATTCATCT 58.546 33.333 0.00 0.00 39.84 2.90
579 614 2.552315 CGCGGGGCATGAAAATTACTAT 59.448 45.455 0.00 0.00 0.00 2.12
720 756 0.039708 GTACCCCGCGCTACTGATAC 60.040 60.000 5.56 0.00 0.00 2.24
743 780 0.749091 TAGACCCGCGCTACTGCTAA 60.749 55.000 5.56 0.00 36.97 3.09
745 782 2.280823 GACCCGCGCTACTGCTAAGT 62.281 60.000 5.56 0.00 40.67 2.24
806 843 1.404391 GTCGAGACGGATGCCTAGAAA 59.596 52.381 0.00 0.00 0.00 2.52
901 938 9.791838 GAATTTGGATGTATCGTTTTTGTTTTC 57.208 29.630 0.00 0.00 0.00 2.29
1155 1193 6.790232 TCTTTCTTTGTTCAAAGGGTGATT 57.210 33.333 20.41 0.00 35.70 2.57
1172 1210 1.196808 GATTGCGAGGAAAAACTGCGA 59.803 47.619 0.00 0.00 0.00 5.10
1488 1528 1.517242 CTGCAGTTCTCTTTTCGCCT 58.483 50.000 5.25 0.00 0.00 5.52
1666 1706 6.458342 CGATTAGGGAATTTTCCTTACTGCAC 60.458 42.308 0.36 0.00 46.72 4.57
1704 1744 8.885494 AGTATTCAGCTTTATTCAGAGTGATC 57.115 34.615 0.00 0.00 0.00 2.92
1769 1809 0.237498 GGTTTACGAACTGCAGTGGC 59.763 55.000 22.49 14.78 36.03 5.01
1782 1822 1.664151 GCAGTGGCGGTACTTAATGAC 59.336 52.381 0.00 0.00 0.00 3.06
1794 1834 6.510536 GGTACTTAATGACGGTGCTTACTAT 58.489 40.000 0.00 0.00 0.00 2.12
1795 1835 7.520453 CGGTACTTAATGACGGTGCTTACTATA 60.520 40.741 0.00 0.00 0.00 1.31
1799 1839 7.871463 ACTTAATGACGGTGCTTACTATAATCC 59.129 37.037 0.00 0.00 0.00 3.01
1800 1840 6.420913 AATGACGGTGCTTACTATAATCCT 57.579 37.500 0.00 0.00 0.00 3.24
1801 1841 5.864418 TGACGGTGCTTACTATAATCCTT 57.136 39.130 0.00 0.00 0.00 3.36
2117 2164 1.693062 TGGTGCATTTTGGTGATTGCT 59.307 42.857 0.00 0.00 36.10 3.91
2215 2264 8.402472 TCCTTGCAGAAACGGTATTTTTATATG 58.598 33.333 0.00 0.00 0.00 1.78
2216 2265 8.188139 CCTTGCAGAAACGGTATTTTTATATGT 58.812 33.333 0.00 0.00 0.00 2.29
2219 2268 8.339714 TGCAGAAACGGTATTTTTATATGTAGC 58.660 33.333 0.00 0.00 0.00 3.58
2220 2269 8.339714 GCAGAAACGGTATTTTTATATGTAGCA 58.660 33.333 0.00 0.00 0.00 3.49
2221 2270 9.646336 CAGAAACGGTATTTTTATATGTAGCAC 57.354 33.333 0.00 0.00 0.00 4.40
2224 2273 7.724305 ACGGTATTTTTATATGTAGCACTGG 57.276 36.000 0.00 0.00 0.00 4.00
2226 2275 6.203915 CGGTATTTTTATATGTAGCACTGGCA 59.796 38.462 0.00 0.00 44.61 4.92
2227 2276 7.094805 CGGTATTTTTATATGTAGCACTGGCAT 60.095 37.037 0.00 0.00 44.61 4.40
2228 2277 9.226606 GGTATTTTTATATGTAGCACTGGCATA 57.773 33.333 0.00 0.00 44.61 3.14
2230 2279 8.690203 ATTTTTATATGTAGCACTGGCATACA 57.310 30.769 1.51 1.51 44.61 2.29
2231 2280 8.690203 TTTTTATATGTAGCACTGGCATACAT 57.310 30.769 14.05 14.05 44.61 2.29
2232 2281 7.671495 TTTATATGTAGCACTGGCATACATG 57.329 36.000 17.51 0.00 44.61 3.21
2234 2283 3.843893 TGTAGCACTGGCATACATGAT 57.156 42.857 0.00 0.00 44.61 2.45
2235 2284 3.732212 TGTAGCACTGGCATACATGATC 58.268 45.455 0.00 0.00 44.61 2.92
2236 2285 3.389002 TGTAGCACTGGCATACATGATCT 59.611 43.478 0.00 0.00 44.61 2.75
2238 2287 4.904895 AGCACTGGCATACATGATCTAT 57.095 40.909 0.00 0.00 44.61 1.98
2239 2288 5.238624 AGCACTGGCATACATGATCTATT 57.761 39.130 0.00 0.00 44.61 1.73
2240 2289 5.001874 AGCACTGGCATACATGATCTATTG 58.998 41.667 0.00 0.00 44.61 1.90
2241 2290 4.379186 GCACTGGCATACATGATCTATTGC 60.379 45.833 0.00 0.00 40.72 3.56
2242 2291 4.155462 CACTGGCATACATGATCTATTGCC 59.845 45.833 0.00 14.65 41.18 4.52
2243 2292 4.042560 ACTGGCATACATGATCTATTGCCT 59.957 41.667 19.21 5.18 41.35 4.75
2249 2298 3.894759 ACATGATCTATTGCCTTGTGCT 58.105 40.909 0.00 0.00 42.00 4.40
2275 2324 1.080569 GGCAATTCAGTTGGTGCCG 60.081 57.895 0.00 0.00 46.48 5.69
2278 2327 0.523072 CAATTCAGTTGGTGCCGAGG 59.477 55.000 0.00 0.00 34.06 4.63
2281 2330 0.534203 TTCAGTTGGTGCCGAGGTTC 60.534 55.000 0.00 0.00 0.00 3.62
2330 2380 4.226761 GCAAACTGCGCTTTATGTAAAGT 58.773 39.130 9.73 0.00 38.32 2.66
2369 2419 7.280876 TCAAGATTCCATGCAGTTACTGTTATC 59.719 37.037 14.23 7.92 33.43 1.75
2375 2425 7.112122 TCCATGCAGTTACTGTTATCAGATTT 58.888 34.615 14.23 0.00 43.76 2.17
2381 2431 8.269424 GCAGTTACTGTTATCAGATTTGATACG 58.731 37.037 14.23 1.35 43.76 3.06
2387 2437 8.391106 ACTGTTATCAGATTTGATACGAAAAGC 58.609 33.333 5.48 0.00 44.03 3.51
2389 2439 7.552687 TGTTATCAGATTTGATACGAAAAGCCT 59.447 33.333 5.48 0.00 44.03 4.58
2390 2440 5.801350 TCAGATTTGATACGAAAAGCCTG 57.199 39.130 0.00 0.00 0.00 4.85
2393 2443 4.458989 AGATTTGATACGAAAAGCCTGCAA 59.541 37.500 0.00 0.00 0.00 4.08
2394 2444 3.552604 TTGATACGAAAAGCCTGCAAC 57.447 42.857 0.00 0.00 0.00 4.17
2395 2445 2.778299 TGATACGAAAAGCCTGCAACT 58.222 42.857 0.00 0.00 0.00 3.16
2396 2446 2.742053 TGATACGAAAAGCCTGCAACTC 59.258 45.455 0.00 0.00 0.00 3.01
2397 2447 2.543777 TACGAAAAGCCTGCAACTCT 57.456 45.000 0.00 0.00 0.00 3.24
2398 2448 2.543777 ACGAAAAGCCTGCAACTCTA 57.456 45.000 0.00 0.00 0.00 2.43
2399 2449 2.143925 ACGAAAAGCCTGCAACTCTAC 58.856 47.619 0.00 0.00 0.00 2.59
2400 2450 2.143122 CGAAAAGCCTGCAACTCTACA 58.857 47.619 0.00 0.00 0.00 2.74
2401 2451 2.548057 CGAAAAGCCTGCAACTCTACAA 59.452 45.455 0.00 0.00 0.00 2.41
2402 2452 3.364366 CGAAAAGCCTGCAACTCTACAAG 60.364 47.826 0.00 0.00 0.00 3.16
2403 2453 2.938956 AAGCCTGCAACTCTACAAGT 57.061 45.000 0.00 0.00 41.10 3.16
2404 2454 2.464157 AGCCTGCAACTCTACAAGTC 57.536 50.000 0.00 0.00 37.17 3.01
2648 2698 9.654663 GACCACTTCTTATTCTTGTGTATTAGT 57.345 33.333 0.00 0.00 0.00 2.24
2723 2788 8.532186 AATTGGATGTTGTTATATGCCTGTTA 57.468 30.769 0.00 0.00 0.00 2.41
2826 2894 7.879160 AGTTTGTAGTTGGGTTCGATAATGTAA 59.121 33.333 0.00 0.00 0.00 2.41
2883 3001 3.185797 GTGTAGTAAAGTTGGCAACTCCG 59.814 47.826 31.24 0.00 41.91 4.63
2972 3090 8.135382 AGCTTATTTTCTGTCTGGAGTACTTA 57.865 34.615 0.00 0.00 0.00 2.24
3172 3291 2.421424 CTCTGGTTCTTGGTATTGCTGC 59.579 50.000 0.00 0.00 0.00 5.25
3181 3300 0.105039 GGTATTGCTGCTAGTCGCCT 59.895 55.000 0.00 0.00 38.05 5.52
3184 3303 0.460987 ATTGCTGCTAGTCGCCTCAC 60.461 55.000 0.00 0.00 38.05 3.51
3200 3319 0.538118 TCACCATGGCCGTAGTAACC 59.462 55.000 13.04 0.00 0.00 2.85
3214 3333 2.747436 AGTAACCGACCGTCTGAAAAC 58.253 47.619 0.00 0.00 0.00 2.43
3279 3398 1.661341 CTGAAGCATGCAGTAGGTCC 58.339 55.000 21.98 0.00 36.83 4.46
3291 3410 3.187700 CAGTAGGTCCGAATACAGTTGC 58.812 50.000 0.00 0.00 0.00 4.17
3404 3545 3.150949 TGTAGCACACAGGCTGCT 58.849 55.556 15.89 9.46 45.34 4.24
3405 3546 2.361189 TGTAGCACACAGGCTGCTA 58.639 52.632 15.89 8.32 45.34 3.49
3407 3548 1.215382 TAGCACACAGGCTGCTACG 59.785 57.895 15.89 3.23 43.37 3.51
3408 3549 1.532604 TAGCACACAGGCTGCTACGT 61.533 55.000 15.89 3.93 43.37 3.57
3409 3550 1.080093 GCACACAGGCTGCTACGTA 60.080 57.895 15.89 0.00 0.00 3.57
3421 3628 5.700373 AGGCTGCTACGTATACTTAGTAGAC 59.300 44.000 27.53 25.93 38.25 2.59
3429 3636 7.020914 ACGTATACTTAGTAGACCTTTTCCG 57.979 40.000 10.98 1.38 27.74 4.30
3460 3667 7.279981 AGAGCAAATATCGTAATGTGTGCTTTA 59.720 33.333 1.99 0.00 44.86 1.85
3550 3757 1.527034 ACGCTGACTACCGTCTGTTA 58.473 50.000 0.00 0.00 40.86 2.41
3612 3819 1.069049 GCAACAAGCACCCAATGAAGT 59.931 47.619 0.00 0.00 44.79 3.01
3769 3978 6.369065 CCTTATTTGCGAGTCACTTTCTAGTT 59.631 38.462 0.00 0.00 30.26 2.24
3771 3980 6.619801 ATTTGCGAGTCACTTTCTAGTTTT 57.380 33.333 0.00 0.00 30.26 2.43
3772 3981 7.724305 ATTTGCGAGTCACTTTCTAGTTTTA 57.276 32.000 0.00 0.00 30.26 1.52
3773 3982 7.724305 TTTGCGAGTCACTTTCTAGTTTTAT 57.276 32.000 0.00 0.00 30.26 1.40
3778 3987 6.369065 CGAGTCACTTTCTAGTTTTATTGCCT 59.631 38.462 0.00 0.00 30.26 4.75
3883 4092 3.603532 TGGCTTGATGTCTGATCACTTC 58.396 45.455 0.00 0.00 0.00 3.01
3896 4105 4.769688 TGATCACTTCTTTATGCATCCGT 58.230 39.130 0.19 0.00 0.00 4.69
3913 4122 1.647084 GTTTGTGCCGTCTGGTGTC 59.353 57.895 0.00 0.00 37.67 3.67
3947 4156 1.673400 GTCTGAGCAGCGATGAGAGTA 59.327 52.381 4.02 0.00 0.00 2.59
4058 4282 6.584185 AAATATAAGACGGTTTGGCAGTTT 57.416 33.333 0.00 0.00 0.00 2.66
4064 4288 4.616953 AGACGGTTTGGCAGTTTAATTTG 58.383 39.130 0.00 0.00 0.00 2.32
4108 4332 7.841915 AAAGTGAATTGTAAGTTTTGTTGGG 57.158 32.000 0.00 0.00 0.00 4.12
4125 4349 6.524101 TGTTGGGAAAATAATACTTCAGCC 57.476 37.500 0.00 0.00 0.00 4.85
4179 4403 7.715265 TTCTATAGCTTACTATTGTTGCTGC 57.285 36.000 14.18 0.00 39.81 5.25
4181 4405 2.369394 AGCTTACTATTGTTGCTGCCC 58.631 47.619 0.00 0.00 34.96 5.36
4194 4418 2.639065 TGCTGCCCGGTAAAGATTAAG 58.361 47.619 0.00 0.00 0.00 1.85
4205 4429 6.148811 CCGGTAAAGATTAAGCTTGAGTTCAA 59.851 38.462 9.86 0.00 0.00 2.69
4241 4465 4.860022 AGGTTGTCATGGCTAGCTTTATT 58.140 39.130 15.72 0.00 0.00 1.40
4245 4469 6.183360 GGTTGTCATGGCTAGCTTTATTGATT 60.183 38.462 15.72 0.00 0.00 2.57
4246 4470 7.013274 GGTTGTCATGGCTAGCTTTATTGATTA 59.987 37.037 15.72 2.72 0.00 1.75
4250 4474 8.405531 GTCATGGCTAGCTTTATTGATTAAACA 58.594 33.333 15.72 0.00 0.00 2.83
4251 4475 8.405531 TCATGGCTAGCTTTATTGATTAAACAC 58.594 33.333 15.72 0.00 0.00 3.32
4266 4490 8.039603 TGATTAAACACTGATACATTGTCCAC 57.960 34.615 0.00 0.00 0.00 4.02
4286 4522 3.184683 GCTTGCTGAGGCTCGTCG 61.185 66.667 10.42 1.95 39.59 5.12
4339 4575 5.293560 ACTGAGATTAGCTAGAAAATCCGC 58.706 41.667 11.72 7.15 33.44 5.54
4341 4577 4.100963 TGAGATTAGCTAGAAAATCCGCCA 59.899 41.667 11.72 7.05 33.44 5.69
4364 4600 6.805271 CCACTTGATTTGCAGATCTAAAACAG 59.195 38.462 17.28 7.03 0.00 3.16
4373 4609 9.862371 TTTGCAGATCTAAAACAGTGTTTAAAA 57.138 25.926 21.14 9.96 0.00 1.52
4401 4637 8.424918 TGATCTTTCCAATCAAGGTAGAGATAC 58.575 37.037 0.00 0.00 30.37 2.24
4409 4645 3.767673 TCAAGGTAGAGATACCCACACAC 59.232 47.826 0.82 0.00 40.97 3.82
4412 4648 3.011369 AGGTAGAGATACCCACACACTCA 59.989 47.826 0.82 0.00 40.97 3.41
4413 4649 3.381908 GGTAGAGATACCCACACACTCAG 59.618 52.174 0.00 0.00 34.06 3.35
4414 4650 3.176924 AGAGATACCCACACACTCAGT 57.823 47.619 0.00 0.00 0.00 3.41
4415 4651 7.121208 GGTAGAGATACCCACACACTCAGTG 62.121 52.000 2.22 2.22 42.82 3.66
4431 4667 1.006337 GTGAAAATTGCAGCCGCCA 60.006 52.632 0.00 0.00 37.32 5.69
4434 4670 0.319813 GAAAATTGCAGCCGCCAAGT 60.320 50.000 0.00 0.00 37.32 3.16
4436 4672 1.462731 AAATTGCAGCCGCCAAGTCA 61.463 50.000 0.00 0.00 37.32 3.41
4439 4675 4.030452 GCAGCCGCCAAGTCACAC 62.030 66.667 0.00 0.00 0.00 3.82
4444 4680 1.525995 CCGCCAAGTCACACCAAGT 60.526 57.895 0.00 0.00 0.00 3.16
4445 4681 0.250124 CCGCCAAGTCACACCAAGTA 60.250 55.000 0.00 0.00 0.00 2.24
4446 4682 1.610624 CCGCCAAGTCACACCAAGTAT 60.611 52.381 0.00 0.00 0.00 2.12
4447 4683 2.151202 CGCCAAGTCACACCAAGTATT 58.849 47.619 0.00 0.00 0.00 1.89
4448 4684 2.159627 CGCCAAGTCACACCAAGTATTC 59.840 50.000 0.00 0.00 0.00 1.75
4449 4685 3.412386 GCCAAGTCACACCAAGTATTCT 58.588 45.455 0.00 0.00 0.00 2.40
4450 4686 3.437049 GCCAAGTCACACCAAGTATTCTC 59.563 47.826 0.00 0.00 0.00 2.87
4451 4687 4.641396 CCAAGTCACACCAAGTATTCTCA 58.359 43.478 0.00 0.00 0.00 3.27
4452 4688 5.248640 CCAAGTCACACCAAGTATTCTCAT 58.751 41.667 0.00 0.00 0.00 2.90
4453 4689 5.352569 CCAAGTCACACCAAGTATTCTCATC 59.647 44.000 0.00 0.00 0.00 2.92
4454 4690 4.748892 AGTCACACCAAGTATTCTCATCG 58.251 43.478 0.00 0.00 0.00 3.84
4455 4691 3.865745 GTCACACCAAGTATTCTCATCGG 59.134 47.826 0.00 0.00 0.00 4.18
4456 4692 3.767131 TCACACCAAGTATTCTCATCGGA 59.233 43.478 0.00 0.00 0.00 4.55
4457 4693 4.221924 TCACACCAAGTATTCTCATCGGAA 59.778 41.667 0.00 0.00 0.00 4.30
4458 4694 4.330074 CACACCAAGTATTCTCATCGGAAC 59.670 45.833 0.00 0.00 0.00 3.62
4459 4695 4.020573 ACACCAAGTATTCTCATCGGAACA 60.021 41.667 0.00 0.00 0.00 3.18
4460 4696 4.935205 CACCAAGTATTCTCATCGGAACAA 59.065 41.667 0.00 0.00 0.00 2.83
4461 4697 5.586243 CACCAAGTATTCTCATCGGAACAAT 59.414 40.000 0.00 0.00 0.00 2.71
4462 4698 6.761242 CACCAAGTATTCTCATCGGAACAATA 59.239 38.462 0.00 0.00 0.00 1.90
4463 4699 7.442364 CACCAAGTATTCTCATCGGAACAATAT 59.558 37.037 0.00 0.00 0.00 1.28
4464 4700 7.993183 ACCAAGTATTCTCATCGGAACAATATT 59.007 33.333 0.00 0.00 0.00 1.28
4465 4701 8.840321 CCAAGTATTCTCATCGGAACAATATTT 58.160 33.333 0.00 0.00 0.00 1.40
4466 4702 9.655769 CAAGTATTCTCATCGGAACAATATTTG 57.344 33.333 0.00 0.00 0.00 2.32
4468 4704 9.046296 AGTATTCTCATCGGAACAATATTTGTC 57.954 33.333 0.00 0.00 44.59 3.18
4469 4705 6.677781 TTCTCATCGGAACAATATTTGTCC 57.322 37.500 4.62 4.62 44.59 4.02
4470 4706 5.739959 TCTCATCGGAACAATATTTGTCCA 58.260 37.500 12.58 3.32 44.59 4.02
4471 4707 5.584649 TCTCATCGGAACAATATTTGTCCAC 59.415 40.000 12.58 0.98 44.59 4.02
4472 4708 5.249420 TCATCGGAACAATATTTGTCCACA 58.751 37.500 12.58 1.87 44.59 4.17
4473 4709 5.353956 TCATCGGAACAATATTTGTCCACAG 59.646 40.000 12.58 3.93 44.59 3.66
4474 4710 4.900684 TCGGAACAATATTTGTCCACAGA 58.099 39.130 12.58 2.28 44.59 3.41
4475 4711 5.496556 TCGGAACAATATTTGTCCACAGAT 58.503 37.500 12.58 0.00 44.59 2.90
4476 4712 6.645306 TCGGAACAATATTTGTCCACAGATA 58.355 36.000 12.58 0.00 44.59 1.98
4477 4713 6.761242 TCGGAACAATATTTGTCCACAGATAG 59.239 38.462 12.58 0.00 44.59 2.08
4478 4714 6.538742 CGGAACAATATTTGTCCACAGATAGT 59.461 38.462 12.58 0.00 44.59 2.12
4479 4715 7.465916 CGGAACAATATTTGTCCACAGATAGTG 60.466 40.741 13.29 13.29 44.59 2.74
4480 4716 7.336931 GGAACAATATTTGTCCACAGATAGTGT 59.663 37.037 14.29 14.29 46.74 3.55
4481 4717 7.849804 ACAATATTTGTCCACAGATAGTGTC 57.150 36.000 14.29 0.00 43.77 3.67
4482 4718 7.394016 ACAATATTTGTCCACAGATAGTGTCA 58.606 34.615 14.29 0.00 43.77 3.58
4483 4719 7.550551 ACAATATTTGTCCACAGATAGTGTCAG 59.449 37.037 14.29 0.00 43.77 3.51
4490 4726 3.119291 CACAGATAGTGTCAGATTCCGC 58.881 50.000 0.00 0.00 43.40 5.54
4491 4727 3.027412 ACAGATAGTGTCAGATTCCGCT 58.973 45.455 0.00 0.00 31.90 5.52
4492 4728 3.449018 ACAGATAGTGTCAGATTCCGCTT 59.551 43.478 0.00 0.00 31.90 4.68
4493 4729 4.047822 CAGATAGTGTCAGATTCCGCTTC 58.952 47.826 0.00 0.00 0.00 3.86
4494 4730 3.701542 AGATAGTGTCAGATTCCGCTTCA 59.298 43.478 0.00 0.00 0.00 3.02
4495 4731 2.839486 AGTGTCAGATTCCGCTTCAA 57.161 45.000 0.00 0.00 0.00 2.69
4496 4732 2.417719 AGTGTCAGATTCCGCTTCAAC 58.582 47.619 0.00 0.00 0.00 3.18
4497 4733 2.037772 AGTGTCAGATTCCGCTTCAACT 59.962 45.455 0.00 0.00 0.00 3.16
4498 4734 2.413453 GTGTCAGATTCCGCTTCAACTC 59.587 50.000 0.00 0.00 0.00 3.01
4499 4735 1.656095 GTCAGATTCCGCTTCAACTCG 59.344 52.381 0.00 0.00 0.00 4.18
4500 4736 0.371645 CAGATTCCGCTTCAACTCGC 59.628 55.000 0.00 0.00 0.00 5.03
4501 4737 0.247736 AGATTCCGCTTCAACTCGCT 59.752 50.000 0.00 0.00 0.00 4.93
4502 4738 0.371645 GATTCCGCTTCAACTCGCTG 59.628 55.000 0.00 0.00 0.00 5.18
4503 4739 1.021390 ATTCCGCTTCAACTCGCTGG 61.021 55.000 0.00 0.00 0.00 4.85
4504 4740 2.048222 CCGCTTCAACTCGCTGGA 60.048 61.111 0.00 0.00 0.00 3.86
4505 4741 1.667830 CCGCTTCAACTCGCTGGAA 60.668 57.895 0.00 0.00 0.00 3.53
4506 4742 1.493311 CGCTTCAACTCGCTGGAAC 59.507 57.895 0.00 0.00 0.00 3.62
4507 4743 1.869690 GCTTCAACTCGCTGGAACC 59.130 57.895 0.00 0.00 0.00 3.62
4508 4744 1.578206 GCTTCAACTCGCTGGAACCC 61.578 60.000 0.00 0.00 0.00 4.11
4509 4745 1.291877 CTTCAACTCGCTGGAACCCG 61.292 60.000 0.00 0.00 0.00 5.28
4510 4746 3.423154 CAACTCGCTGGAACCCGC 61.423 66.667 0.00 0.00 0.00 6.13
4511 4747 3.936203 AACTCGCTGGAACCCGCA 61.936 61.111 7.88 0.00 0.00 5.69
4512 4748 3.883744 AACTCGCTGGAACCCGCAG 62.884 63.158 7.88 6.61 0.00 5.18
4513 4749 4.379243 CTCGCTGGAACCCGCAGT 62.379 66.667 7.88 0.00 0.00 4.40
4514 4750 4.680237 TCGCTGGAACCCGCAGTG 62.680 66.667 7.88 0.00 0.00 3.66
4515 4751 4.988598 CGCTGGAACCCGCAGTGT 62.989 66.667 7.88 0.00 0.00 3.55
4516 4752 3.357079 GCTGGAACCCGCAGTGTG 61.357 66.667 0.00 0.00 0.00 3.82
4517 4753 2.111043 CTGGAACCCGCAGTGTGT 59.889 61.111 2.46 0.00 0.00 3.72
4518 4754 1.525995 CTGGAACCCGCAGTGTGTT 60.526 57.895 2.46 0.00 0.00 3.32
4519 4755 1.077357 TGGAACCCGCAGTGTGTTT 60.077 52.632 2.46 0.00 0.00 2.83
4520 4756 1.358759 GGAACCCGCAGTGTGTTTG 59.641 57.895 2.46 0.00 0.00 2.93
4521 4757 1.358759 GAACCCGCAGTGTGTTTGG 59.641 57.895 2.46 0.00 0.00 3.28
4522 4758 1.379309 AACCCGCAGTGTGTTTGGT 60.379 52.632 2.46 0.00 0.00 3.67
4523 4759 0.968393 AACCCGCAGTGTGTTTGGTT 60.968 50.000 9.31 9.31 0.00 3.67
4524 4760 1.065600 CCCGCAGTGTGTTTGGTTG 59.934 57.895 2.46 0.00 0.00 3.77
4525 4761 1.065600 CCGCAGTGTGTTTGGTTGG 59.934 57.895 2.46 0.00 0.00 3.77
4526 4762 1.662438 CCGCAGTGTGTTTGGTTGGT 61.662 55.000 2.46 0.00 0.00 3.67
4527 4763 0.172352 CGCAGTGTGTTTGGTTGGTT 59.828 50.000 0.00 0.00 0.00 3.67
4528 4764 1.402259 CGCAGTGTGTTTGGTTGGTTA 59.598 47.619 0.00 0.00 0.00 2.85
4529 4765 2.540769 CGCAGTGTGTTTGGTTGGTTAG 60.541 50.000 0.00 0.00 0.00 2.34
4530 4766 2.223711 GCAGTGTGTTTGGTTGGTTAGG 60.224 50.000 0.00 0.00 0.00 2.69
4531 4767 3.283751 CAGTGTGTTTGGTTGGTTAGGA 58.716 45.455 0.00 0.00 0.00 2.94
4532 4768 3.315191 CAGTGTGTTTGGTTGGTTAGGAG 59.685 47.826 0.00 0.00 0.00 3.69
4533 4769 2.621526 GTGTGTTTGGTTGGTTAGGAGG 59.378 50.000 0.00 0.00 0.00 4.30
4534 4770 2.510382 TGTGTTTGGTTGGTTAGGAGGA 59.490 45.455 0.00 0.00 0.00 3.71
4535 4771 3.139397 TGTGTTTGGTTGGTTAGGAGGAT 59.861 43.478 0.00 0.00 0.00 3.24
4536 4772 4.149598 GTGTTTGGTTGGTTAGGAGGATT 58.850 43.478 0.00 0.00 0.00 3.01
4537 4773 4.022329 GTGTTTGGTTGGTTAGGAGGATTG 60.022 45.833 0.00 0.00 0.00 2.67
4538 4774 4.141135 TGTTTGGTTGGTTAGGAGGATTGA 60.141 41.667 0.00 0.00 0.00 2.57
4539 4775 4.301072 TTGGTTGGTTAGGAGGATTGAG 57.699 45.455 0.00 0.00 0.00 3.02
4540 4776 3.526899 TGGTTGGTTAGGAGGATTGAGA 58.473 45.455 0.00 0.00 0.00 3.27
4541 4777 3.913799 TGGTTGGTTAGGAGGATTGAGAA 59.086 43.478 0.00 0.00 0.00 2.87
4542 4778 4.540099 TGGTTGGTTAGGAGGATTGAGAAT 59.460 41.667 0.00 0.00 0.00 2.40
4543 4779 5.015178 TGGTTGGTTAGGAGGATTGAGAATT 59.985 40.000 0.00 0.00 0.00 2.17
4544 4780 5.590663 GGTTGGTTAGGAGGATTGAGAATTC 59.409 44.000 0.00 0.00 0.00 2.17
4545 4781 6.180472 GTTGGTTAGGAGGATTGAGAATTCA 58.820 40.000 8.44 0.00 0.00 2.57
4546 4782 5.994250 TGGTTAGGAGGATTGAGAATTCAG 58.006 41.667 8.44 0.00 34.15 3.02
4547 4783 5.726308 TGGTTAGGAGGATTGAGAATTCAGA 59.274 40.000 8.44 0.00 34.15 3.27
4548 4784 6.215431 TGGTTAGGAGGATTGAGAATTCAGAA 59.785 38.462 8.44 0.00 34.15 3.02
4549 4785 6.765512 GGTTAGGAGGATTGAGAATTCAGAAG 59.234 42.308 8.44 0.00 34.15 2.85
4550 4786 5.370875 AGGAGGATTGAGAATTCAGAAGG 57.629 43.478 8.44 0.00 34.15 3.46
4551 4787 4.165758 AGGAGGATTGAGAATTCAGAAGGG 59.834 45.833 8.44 0.00 34.15 3.95
4552 4788 4.164988 GGAGGATTGAGAATTCAGAAGGGA 59.835 45.833 8.44 0.00 34.15 4.20
4553 4789 5.339530 GGAGGATTGAGAATTCAGAAGGGAA 60.340 44.000 8.44 0.00 34.15 3.97
4554 4790 6.338591 AGGATTGAGAATTCAGAAGGGAAT 57.661 37.500 8.44 0.00 39.11 3.01
4555 4791 7.420680 GGAGGATTGAGAATTCAGAAGGGAATA 60.421 40.741 8.44 0.00 36.51 1.75
4556 4792 7.516452 AGGATTGAGAATTCAGAAGGGAATAG 58.484 38.462 8.44 0.00 36.51 1.73
4557 4793 6.714356 GGATTGAGAATTCAGAAGGGAATAGG 59.286 42.308 8.44 0.00 36.51 2.57
4558 4794 5.041191 TGAGAATTCAGAAGGGAATAGGC 57.959 43.478 8.44 0.00 36.51 3.93
4559 4795 4.474651 TGAGAATTCAGAAGGGAATAGGCA 59.525 41.667 8.44 0.00 36.51 4.75
4560 4796 5.133322 TGAGAATTCAGAAGGGAATAGGCAT 59.867 40.000 8.44 0.00 36.51 4.40
4561 4797 5.383476 AGAATTCAGAAGGGAATAGGCATG 58.617 41.667 8.44 0.00 36.51 4.06
4562 4798 3.582998 TTCAGAAGGGAATAGGCATGG 57.417 47.619 0.00 0.00 0.00 3.66
4563 4799 1.776667 TCAGAAGGGAATAGGCATGGG 59.223 52.381 0.00 0.00 0.00 4.00
4564 4800 1.776667 CAGAAGGGAATAGGCATGGGA 59.223 52.381 0.00 0.00 0.00 4.37
4565 4801 2.377869 CAGAAGGGAATAGGCATGGGAT 59.622 50.000 0.00 0.00 0.00 3.85
4566 4802 3.066704 AGAAGGGAATAGGCATGGGATT 58.933 45.455 0.00 0.00 0.00 3.01
4567 4803 4.043310 CAGAAGGGAATAGGCATGGGATTA 59.957 45.833 0.00 0.00 0.00 1.75
4568 4804 4.860278 AGAAGGGAATAGGCATGGGATTAT 59.140 41.667 0.00 0.00 0.00 1.28
4569 4805 6.038609 AGAAGGGAATAGGCATGGGATTATA 58.961 40.000 0.00 0.00 0.00 0.98
4570 4806 5.983333 AGGGAATAGGCATGGGATTATAG 57.017 43.478 0.00 0.00 0.00 1.31
4571 4807 5.613826 AGGGAATAGGCATGGGATTATAGA 58.386 41.667 0.00 0.00 0.00 1.98
4572 4808 5.430089 AGGGAATAGGCATGGGATTATAGAC 59.570 44.000 0.00 0.00 0.00 2.59
4573 4809 5.430089 GGGAATAGGCATGGGATTATAGACT 59.570 44.000 0.00 0.00 0.00 3.24
4574 4810 6.408662 GGGAATAGGCATGGGATTATAGACTC 60.409 46.154 0.00 0.00 0.00 3.36
4575 4811 6.385467 GGAATAGGCATGGGATTATAGACTCT 59.615 42.308 0.00 0.00 0.00 3.24
4576 4812 7.565398 GGAATAGGCATGGGATTATAGACTCTA 59.435 40.741 0.00 0.00 0.00 2.43
4577 4813 8.917414 AATAGGCATGGGATTATAGACTCTAA 57.083 34.615 0.00 0.00 0.00 2.10
4578 4814 6.613153 AGGCATGGGATTATAGACTCTAAC 57.387 41.667 0.00 0.00 0.00 2.34
4579 4815 6.326970 AGGCATGGGATTATAGACTCTAACT 58.673 40.000 0.00 0.00 0.00 2.24
4580 4816 6.439058 AGGCATGGGATTATAGACTCTAACTC 59.561 42.308 0.00 0.00 0.00 3.01
4581 4817 6.351456 GGCATGGGATTATAGACTCTAACTCC 60.351 46.154 0.00 0.00 0.00 3.85
4582 4818 6.351456 GCATGGGATTATAGACTCTAACTCCC 60.351 46.154 16.96 16.96 41.25 4.30
4583 4819 6.289482 TGGGATTATAGACTCTAACTCCCA 57.711 41.667 20.07 20.07 46.73 4.37
4584 4820 6.875469 TGGGATTATAGACTCTAACTCCCAT 58.125 40.000 20.07 0.00 44.67 4.00
4585 4821 6.954684 TGGGATTATAGACTCTAACTCCCATC 59.045 42.308 20.07 5.77 44.67 3.51
4586 4822 6.095720 GGGATTATAGACTCTAACTCCCATCG 59.904 46.154 18.04 0.00 40.69 3.84
4587 4823 6.660094 GGATTATAGACTCTAACTCCCATCGT 59.340 42.308 0.00 0.00 0.00 3.73
4588 4824 7.177041 GGATTATAGACTCTAACTCCCATCGTT 59.823 40.741 0.00 0.00 0.00 3.85
4589 4825 7.893124 TTATAGACTCTAACTCCCATCGTTT 57.107 36.000 0.00 0.00 0.00 3.60
4590 4826 6.793505 ATAGACTCTAACTCCCATCGTTTT 57.206 37.500 0.00 0.00 0.00 2.43
4591 4827 7.893124 ATAGACTCTAACTCCCATCGTTTTA 57.107 36.000 0.00 0.00 0.00 1.52
4592 4828 6.793505 AGACTCTAACTCCCATCGTTTTAT 57.206 37.500 0.00 0.00 0.00 1.40
4593 4829 7.184067 AGACTCTAACTCCCATCGTTTTATT 57.816 36.000 0.00 0.00 0.00 1.40
4594 4830 8.302515 AGACTCTAACTCCCATCGTTTTATTA 57.697 34.615 0.00 0.00 0.00 0.98
4595 4831 8.755977 AGACTCTAACTCCCATCGTTTTATTAA 58.244 33.333 0.00 0.00 0.00 1.40
4596 4832 9.543783 GACTCTAACTCCCATCGTTTTATTAAT 57.456 33.333 0.00 0.00 0.00 1.40
4599 4835 9.991906 TCTAACTCCCATCGTTTTATTAATAGG 57.008 33.333 0.00 0.00 0.00 2.57
4600 4836 9.216117 CTAACTCCCATCGTTTTATTAATAGGG 57.784 37.037 7.19 7.19 35.09 3.53
4601 4837 6.540083 ACTCCCATCGTTTTATTAATAGGGG 58.460 40.000 11.75 5.69 34.54 4.79
4602 4838 6.330778 ACTCCCATCGTTTTATTAATAGGGGA 59.669 38.462 11.75 9.06 38.48 4.81
4603 4839 6.775708 TCCCATCGTTTTATTAATAGGGGAG 58.224 40.000 11.75 0.00 36.00 4.30
4604 4840 5.944007 CCCATCGTTTTATTAATAGGGGAGG 59.056 44.000 6.00 1.29 33.64 4.30
4605 4841 5.944007 CCATCGTTTTATTAATAGGGGAGGG 59.056 44.000 0.00 0.93 0.00 4.30
4606 4842 5.571791 TCGTTTTATTAATAGGGGAGGGG 57.428 43.478 0.00 0.00 0.00 4.79
4607 4843 4.351704 TCGTTTTATTAATAGGGGAGGGGG 59.648 45.833 0.00 0.00 0.00 5.40
4608 4844 4.105217 CGTTTTATTAATAGGGGAGGGGGT 59.895 45.833 0.00 0.00 0.00 4.95
4609 4845 5.391256 GTTTTATTAATAGGGGAGGGGGTG 58.609 45.833 0.00 0.00 0.00 4.61
4610 4846 2.149521 ATTAATAGGGGAGGGGGTGG 57.850 55.000 0.00 0.00 0.00 4.61
4611 4847 0.028433 TTAATAGGGGAGGGGGTGGG 60.028 60.000 0.00 0.00 0.00 4.61
4612 4848 0.942561 TAATAGGGGAGGGGGTGGGA 60.943 60.000 0.00 0.00 0.00 4.37
4613 4849 1.855690 AATAGGGGAGGGGGTGGGAA 61.856 60.000 0.00 0.00 0.00 3.97
4614 4850 1.632984 ATAGGGGAGGGGGTGGGAAT 61.633 60.000 0.00 0.00 0.00 3.01
4615 4851 1.855690 TAGGGGAGGGGGTGGGAATT 61.856 60.000 0.00 0.00 0.00 2.17
4616 4852 2.689813 GGGAGGGGGTGGGAATTG 59.310 66.667 0.00 0.00 0.00 2.32
4617 4853 2.689813 GGAGGGGGTGGGAATTGG 59.310 66.667 0.00 0.00 0.00 3.16
4618 4854 1.933812 GGAGGGGGTGGGAATTGGA 60.934 63.158 0.00 0.00 0.00 3.53
4619 4855 1.514864 GGAGGGGGTGGGAATTGGAA 61.515 60.000 0.00 0.00 0.00 3.53
4620 4856 0.411848 GAGGGGGTGGGAATTGGAAA 59.588 55.000 0.00 0.00 0.00 3.13
4621 4857 0.413434 AGGGGGTGGGAATTGGAAAG 59.587 55.000 0.00 0.00 0.00 2.62
4622 4858 0.617535 GGGGGTGGGAATTGGAAAGG 60.618 60.000 0.00 0.00 0.00 3.11
4623 4859 0.411848 GGGGTGGGAATTGGAAAGGA 59.588 55.000 0.00 0.00 0.00 3.36
4624 4860 1.203250 GGGGTGGGAATTGGAAAGGAA 60.203 52.381 0.00 0.00 0.00 3.36
4625 4861 2.561984 GGGGTGGGAATTGGAAAGGAAT 60.562 50.000 0.00 0.00 0.00 3.01
4626 4862 3.181329 GGGTGGGAATTGGAAAGGAATT 58.819 45.455 0.00 0.00 0.00 2.17
4627 4863 3.055167 GGGTGGGAATTGGAAAGGAATTG 60.055 47.826 0.00 0.00 0.00 2.32
4628 4864 3.582647 GGTGGGAATTGGAAAGGAATTGT 59.417 43.478 0.00 0.00 0.00 2.71
4629 4865 4.041567 GGTGGGAATTGGAAAGGAATTGTT 59.958 41.667 0.00 0.00 0.00 2.83
4630 4866 5.456042 GGTGGGAATTGGAAAGGAATTGTTT 60.456 40.000 0.00 0.00 0.00 2.83
4631 4867 6.061441 GTGGGAATTGGAAAGGAATTGTTTT 58.939 36.000 0.00 0.00 0.00 2.43
4632 4868 7.220740 GTGGGAATTGGAAAGGAATTGTTTTA 58.779 34.615 0.00 0.00 0.00 1.52
4633 4869 7.387673 GTGGGAATTGGAAAGGAATTGTTTTAG 59.612 37.037 0.00 0.00 0.00 1.85
4634 4870 7.071824 TGGGAATTGGAAAGGAATTGTTTTAGT 59.928 33.333 0.00 0.00 0.00 2.24
4635 4871 7.936847 GGGAATTGGAAAGGAATTGTTTTAGTT 59.063 33.333 0.00 0.00 0.00 2.24
4636 4872 9.990360 GGAATTGGAAAGGAATTGTTTTAGTTA 57.010 29.630 0.00 0.00 0.00 2.24
4640 4876 8.754991 TGGAAAGGAATTGTTTTAGTTAGTCA 57.245 30.769 0.00 0.00 0.00 3.41
4641 4877 9.191479 TGGAAAGGAATTGTTTTAGTTAGTCAA 57.809 29.630 0.00 0.00 0.00 3.18
4657 4893 8.367660 AGTTAGTCAATCTTAGTCCTTCATCA 57.632 34.615 0.00 0.00 0.00 3.07
4658 4894 8.986991 AGTTAGTCAATCTTAGTCCTTCATCAT 58.013 33.333 0.00 0.00 0.00 2.45
4662 4898 8.986991 AGTCAATCTTAGTCCTTCATCATAACT 58.013 33.333 0.00 0.00 0.00 2.24
4663 4899 9.606631 GTCAATCTTAGTCCTTCATCATAACTT 57.393 33.333 0.00 0.00 0.00 2.66
4677 4913 9.967451 TTCATCATAACTTACATTAACTTCCCA 57.033 29.630 0.00 0.00 0.00 4.37
4680 4916 9.920946 ATCATAACTTACATTAACTTCCCATGT 57.079 29.630 0.00 0.00 35.33 3.21
4681 4917 9.391006 TCATAACTTACATTAACTTCCCATGTC 57.609 33.333 0.00 0.00 33.19 3.06
4682 4918 9.396022 CATAACTTACATTAACTTCCCATGTCT 57.604 33.333 0.00 0.00 33.19 3.41
4685 4921 8.147244 ACTTACATTAACTTCCCATGTCTAGT 57.853 34.615 0.00 0.00 33.19 2.57
4686 4922 8.603304 ACTTACATTAACTTCCCATGTCTAGTT 58.397 33.333 8.17 8.17 33.19 2.24
4687 4923 9.099454 CTTACATTAACTTCCCATGTCTAGTTC 57.901 37.037 6.80 0.00 33.19 3.01
4688 4924 6.415573 ACATTAACTTCCCATGTCTAGTTCC 58.584 40.000 6.80 0.00 33.28 3.62
4689 4925 6.215636 ACATTAACTTCCCATGTCTAGTTCCT 59.784 38.462 6.80 0.00 33.28 3.36
4690 4926 4.828072 AACTTCCCATGTCTAGTTCCTC 57.172 45.455 0.00 0.00 0.00 3.71
4691 4927 2.761208 ACTTCCCATGTCTAGTTCCTCG 59.239 50.000 0.00 0.00 0.00 4.63
4692 4928 1.112113 TCCCATGTCTAGTTCCTCGC 58.888 55.000 0.00 0.00 0.00 5.03
4693 4929 0.105039 CCCATGTCTAGTTCCTCGCC 59.895 60.000 0.00 0.00 0.00 5.54
4694 4930 0.824109 CCATGTCTAGTTCCTCGCCA 59.176 55.000 0.00 0.00 0.00 5.69
4695 4931 1.207089 CCATGTCTAGTTCCTCGCCAA 59.793 52.381 0.00 0.00 0.00 4.52
4696 4932 2.158900 CCATGTCTAGTTCCTCGCCAAT 60.159 50.000 0.00 0.00 0.00 3.16
4697 4933 3.535561 CATGTCTAGTTCCTCGCCAATT 58.464 45.455 0.00 0.00 0.00 2.32
4698 4934 3.695830 TGTCTAGTTCCTCGCCAATTT 57.304 42.857 0.00 0.00 0.00 1.82
4699 4935 4.015872 TGTCTAGTTCCTCGCCAATTTT 57.984 40.909 0.00 0.00 0.00 1.82
4700 4936 4.000988 TGTCTAGTTCCTCGCCAATTTTC 58.999 43.478 0.00 0.00 0.00 2.29
4701 4937 4.000988 GTCTAGTTCCTCGCCAATTTTCA 58.999 43.478 0.00 0.00 0.00 2.69
4702 4938 4.636206 GTCTAGTTCCTCGCCAATTTTCAT 59.364 41.667 0.00 0.00 0.00 2.57
4703 4939 3.855689 AGTTCCTCGCCAATTTTCATG 57.144 42.857 0.00 0.00 0.00 3.07
4704 4940 3.420893 AGTTCCTCGCCAATTTTCATGA 58.579 40.909 0.00 0.00 0.00 3.07
4705 4941 3.826157 AGTTCCTCGCCAATTTTCATGAA 59.174 39.130 3.38 3.38 0.00 2.57
4706 4942 3.848272 TCCTCGCCAATTTTCATGAAC 57.152 42.857 7.89 0.00 0.00 3.18
4707 4943 2.491693 TCCTCGCCAATTTTCATGAACC 59.508 45.455 7.89 0.00 0.00 3.62
4708 4944 2.230992 CCTCGCCAATTTTCATGAACCA 59.769 45.455 7.89 0.00 0.00 3.67
4709 4945 3.305950 CCTCGCCAATTTTCATGAACCAA 60.306 43.478 7.89 0.84 0.00 3.67
4710 4946 4.305769 CTCGCCAATTTTCATGAACCAAA 58.694 39.130 7.89 0.03 0.00 3.28
4711 4947 4.054671 TCGCCAATTTTCATGAACCAAAC 58.945 39.130 7.89 0.00 0.00 2.93
4712 4948 3.806521 CGCCAATTTTCATGAACCAAACA 59.193 39.130 7.89 0.00 0.00 2.83
4713 4949 4.272018 CGCCAATTTTCATGAACCAAACAA 59.728 37.500 7.89 0.00 0.00 2.83
4714 4950 5.558653 CGCCAATTTTCATGAACCAAACAAG 60.559 40.000 7.89 0.00 0.00 3.16
4715 4951 5.277925 GCCAATTTTCATGAACCAAACAAGG 60.278 40.000 7.89 4.76 0.00 3.61
4716 4952 5.239087 CCAATTTTCATGAACCAAACAAGGG 59.761 40.000 7.89 1.63 0.00 3.95
4717 4953 5.885449 ATTTTCATGAACCAAACAAGGGA 57.115 34.783 7.89 0.00 0.00 4.20
4718 4954 5.683876 TTTTCATGAACCAAACAAGGGAA 57.316 34.783 7.89 0.00 0.00 3.97
4719 4955 5.885449 TTTCATGAACCAAACAAGGGAAT 57.115 34.783 7.89 0.00 0.00 3.01
4720 4956 6.985653 TTTCATGAACCAAACAAGGGAATA 57.014 33.333 7.89 0.00 0.00 1.75
4721 4957 5.975693 TCATGAACCAAACAAGGGAATAC 57.024 39.130 0.00 0.00 0.00 1.89
4722 4958 5.389520 TCATGAACCAAACAAGGGAATACA 58.610 37.500 0.00 0.00 0.00 2.29
4723 4959 5.476599 TCATGAACCAAACAAGGGAATACAG 59.523 40.000 0.00 0.00 0.00 2.74
4724 4960 4.798882 TGAACCAAACAAGGGAATACAGT 58.201 39.130 0.00 0.00 0.00 3.55
4725 4961 5.205056 TGAACCAAACAAGGGAATACAGTT 58.795 37.500 0.00 0.00 0.00 3.16
4726 4962 5.659079 TGAACCAAACAAGGGAATACAGTTT 59.341 36.000 0.00 0.00 33.09 2.66
4727 4963 5.784578 ACCAAACAAGGGAATACAGTTTC 57.215 39.130 0.00 0.00 30.68 2.78
4728 4964 5.454966 ACCAAACAAGGGAATACAGTTTCT 58.545 37.500 0.00 0.00 30.68 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
117 119 7.767198 TCACCACCAACACTAGCTAATAATAAC 59.233 37.037 0.00 0.00 0.00 1.89
330 337 3.869065 TGAATCTAATCCGCGTTCCTTT 58.131 40.909 4.92 0.00 0.00 3.11
354 361 2.710377 TGGTCACTTTTGATCCATCCG 58.290 47.619 0.00 0.00 30.91 4.18
475 482 7.539712 AAGAGGTTGTTATATCATTGTGTCG 57.460 36.000 0.00 0.00 0.00 4.35
579 614 7.318141 AGCGTTGTTGCTAATCTAACTAGTAA 58.682 34.615 0.00 0.00 45.14 2.24
632 668 4.535781 TCCTACCCACGCTACTGTTATAA 58.464 43.478 0.00 0.00 0.00 0.98
720 756 2.201022 AGTAGCGCGGGTCTATGGG 61.201 63.158 8.83 0.00 0.00 4.00
743 780 6.273965 ACCCAATACACTACTAGGGAAAAACT 59.726 38.462 0.00 0.00 39.60 2.66
745 782 6.707273 ACCCAATACACTACTAGGGAAAAA 57.293 37.500 0.00 0.00 39.60 1.94
867 904 4.202357 CGATACATCCAAATTCCTGGGAGA 60.202 45.833 0.00 0.00 37.06 3.71
901 938 5.995282 TGTCCTTACAAACACATCCTTACAG 59.005 40.000 0.00 0.00 30.91 2.74
1155 1193 1.999735 CTATCGCAGTTTTTCCTCGCA 59.000 47.619 0.00 0.00 0.00 5.10
1562 1602 1.073964 CGCAGATCAGAACCACAGTG 58.926 55.000 0.00 0.00 0.00 3.66
1596 1636 2.474359 CCAAGTCAGATCGAATCGATGC 59.526 50.000 23.67 13.81 47.00 3.91
1666 1706 3.990469 GCTGAATACTATCACCCATCACG 59.010 47.826 0.00 0.00 0.00 4.35
1704 1744 2.954753 GCACCTGAACTTGACGCCG 61.955 63.158 0.00 0.00 0.00 6.46
1769 1809 2.288961 AGCACCGTCATTAAGTACCG 57.711 50.000 0.00 0.00 0.00 4.02
1782 1822 9.790389 CTCTTATAAGGATTATAGTAAGCACCG 57.210 37.037 12.54 0.00 43.73 4.94
1794 1834 9.147732 TCAGTTGCAGATCTCTTATAAGGATTA 57.852 33.333 12.54 0.00 33.48 1.75
1795 1835 7.930865 GTCAGTTGCAGATCTCTTATAAGGATT 59.069 37.037 12.54 0.00 0.00 3.01
1799 1839 6.269315 ACGTCAGTTGCAGATCTCTTATAAG 58.731 40.000 6.11 6.11 0.00 1.73
1800 1840 6.208988 ACGTCAGTTGCAGATCTCTTATAA 57.791 37.500 0.00 0.00 0.00 0.98
1801 1841 5.836821 ACGTCAGTTGCAGATCTCTTATA 57.163 39.130 0.00 0.00 0.00 0.98
1951 1996 6.154203 TGATCGATTCTGAGGATATATGGC 57.846 41.667 0.00 0.00 0.00 4.40
2117 2164 8.790674 GCGATTATTCTGTTAACGCAAAATAAA 58.209 29.630 0.00 0.00 43.18 1.40
2142 2189 0.386478 CTTCGCAGTTGCAGAAAGGC 60.386 55.000 4.84 0.00 42.21 4.35
2215 2264 4.000331 AGATCATGTATGCCAGTGCTAC 58.000 45.455 0.00 0.00 38.71 3.58
2216 2265 6.168389 CAATAGATCATGTATGCCAGTGCTA 58.832 40.000 0.00 0.00 38.71 3.49
2217 2266 4.904895 ATAGATCATGTATGCCAGTGCT 57.095 40.909 0.00 0.00 38.71 4.40
2218 2267 4.379186 GCAATAGATCATGTATGCCAGTGC 60.379 45.833 0.00 0.00 38.26 4.40
2219 2268 4.155462 GGCAATAGATCATGTATGCCAGTG 59.845 45.833 17.67 0.00 40.57 3.66
2220 2269 4.042560 AGGCAATAGATCATGTATGCCAGT 59.957 41.667 21.92 7.13 43.04 4.00
2221 2270 4.586884 AGGCAATAGATCATGTATGCCAG 58.413 43.478 21.92 0.95 43.04 4.85
2224 2273 5.696822 CACAAGGCAATAGATCATGTATGC 58.303 41.667 0.00 0.00 0.00 3.14
2226 2275 5.954296 GCACAAGGCAATAGATCATGTAT 57.046 39.130 0.00 0.00 43.97 2.29
2256 2305 4.994744 GCACCAACTGAATTGCCC 57.005 55.556 0.00 0.00 36.93 5.36
2274 2323 8.994429 AATAAGATGCTTATATGAGAACCTCG 57.006 34.615 0.00 0.00 32.35 4.63
2330 2380 7.280876 GCATGGAATCTTGATTGTACAACTAGA 59.719 37.037 11.22 15.32 0.00 2.43
2346 2396 6.653020 TGATAACAGTAACTGCATGGAATCT 58.347 36.000 0.00 0.00 34.37 2.40
2349 2399 6.048732 TCTGATAACAGTAACTGCATGGAA 57.951 37.500 0.00 0.00 43.81 3.53
2369 2419 4.142622 TGCAGGCTTTTCGTATCAAATCTG 60.143 41.667 0.00 0.00 0.00 2.90
2375 2425 2.742053 GAGTTGCAGGCTTTTCGTATCA 59.258 45.455 0.00 0.00 0.00 2.15
2381 2431 3.565902 ACTTGTAGAGTTGCAGGCTTTTC 59.434 43.478 0.00 0.00 33.92 2.29
2383 2433 3.142174 GACTTGTAGAGTTGCAGGCTTT 58.858 45.455 0.00 0.00 39.19 3.51
2648 2698 7.120285 CACAATGCAATCCTTAAAGAGAGAAGA 59.880 37.037 0.00 0.00 0.00 2.87
2684 2734 8.296713 ACAACATCCAATTACAAACTGTATCAC 58.703 33.333 0.00 0.00 32.20 3.06
2768 2833 3.742385 AGTAGAGAGATACTACCCACGC 58.258 50.000 0.00 0.00 40.45 5.34
2826 2894 4.475016 AGTGAAGCATACTACCATTTCCCT 59.525 41.667 0.00 0.00 0.00 4.20
2972 3090 8.721133 TGTATAATACACTCCATGGTCAGTAT 57.279 34.615 12.58 14.31 32.89 2.12
3049 3168 3.354397 GTGCAACTGAAACAAAGAGACG 58.646 45.455 0.00 0.00 0.00 4.18
3133 3252 5.835280 ACCAGAGATTCAAGGAAAATGTGTT 59.165 36.000 0.00 0.00 0.00 3.32
3172 3291 1.227380 GCCATGGTGAGGCGACTAG 60.227 63.158 14.67 0.00 44.43 2.57
3181 3300 0.538118 GGTTACTACGGCCATGGTGA 59.462 55.000 14.67 0.00 0.00 4.02
3184 3303 0.529119 GTCGGTTACTACGGCCATGG 60.529 60.000 7.63 7.63 0.00 3.66
3200 3319 2.470821 ACTTCAGTTTTCAGACGGTCG 58.529 47.619 1.89 0.00 0.00 4.79
3214 3333 8.777865 TTGGTGAGATGAATAAGTAACTTCAG 57.222 34.615 0.00 0.00 35.04 3.02
3260 3379 1.661341 GGACCTACTGCATGCTTCAG 58.339 55.000 20.33 10.70 37.56 3.02
3267 3386 3.031736 ACTGTATTCGGACCTACTGCAT 58.968 45.455 0.00 0.00 0.00 3.96
3279 3398 6.742718 CAGTATGAAAAAGGCAACTGTATTCG 59.257 38.462 0.00 0.00 45.57 3.34
3291 3410 4.996122 TGCATTTTGCCAGTATGAAAAAGG 59.004 37.500 0.00 0.00 44.23 3.11
3315 3434 9.349713 ACATGTTTCTAAACTAAAAGGATCACA 57.650 29.630 7.09 0.00 39.59 3.58
3325 3444 9.243637 GAAATGCACAACATGTTTCTAAACTAA 57.756 29.630 8.77 0.00 39.60 2.24
3326 3445 8.409371 TGAAATGCACAACATGTTTCTAAACTA 58.591 29.630 8.77 0.00 39.60 2.24
3343 3462 6.500684 TGAGAAATTCCTACTGAAATGCAC 57.499 37.500 0.00 0.00 36.33 4.57
3396 3537 4.832590 ACTAAGTATACGTAGCAGCCTG 57.167 45.455 21.33 2.54 32.33 4.85
3398 3539 5.106752 GGTCTACTAAGTATACGTAGCAGCC 60.107 48.000 21.33 18.31 32.33 4.85
3399 3540 5.700373 AGGTCTACTAAGTATACGTAGCAGC 59.300 44.000 21.33 15.64 32.33 5.25
3400 3541 7.727331 AAGGTCTACTAAGTATACGTAGCAG 57.273 40.000 21.33 18.55 32.33 4.24
3401 3542 8.511604 AAAAGGTCTACTAAGTATACGTAGCA 57.488 34.615 21.33 11.10 32.33 3.49
3402 3543 8.073167 GGAAAAGGTCTACTAAGTATACGTAGC 58.927 40.741 21.33 8.57 32.33 3.58
3403 3544 8.279103 CGGAAAAGGTCTACTAAGTATACGTAG 58.721 40.741 20.22 20.22 34.73 3.51
3404 3545 7.226720 CCGGAAAAGGTCTACTAAGTATACGTA 59.773 40.741 0.00 0.00 0.00 3.57
3405 3546 6.038714 CCGGAAAAGGTCTACTAAGTATACGT 59.961 42.308 0.00 0.00 0.00 3.57
3406 3547 6.433766 CCGGAAAAGGTCTACTAAGTATACG 58.566 44.000 0.00 0.00 0.00 3.06
3407 3548 6.183360 TGCCGGAAAAGGTCTACTAAGTATAC 60.183 42.308 5.05 0.00 0.00 1.47
3408 3549 5.893255 TGCCGGAAAAGGTCTACTAAGTATA 59.107 40.000 5.05 0.00 0.00 1.47
3409 3550 4.713321 TGCCGGAAAAGGTCTACTAAGTAT 59.287 41.667 5.05 0.00 0.00 2.12
3421 3628 1.750193 TTGCTCTATGCCGGAAAAGG 58.250 50.000 5.05 0.00 42.00 3.11
3429 3636 6.147821 ACACATTACGATATTTGCTCTATGCC 59.852 38.462 0.00 0.00 42.00 4.40
3460 3667 4.021192 CACAACCTACAAGGCCAATGAAAT 60.021 41.667 14.81 0.00 39.63 2.17
3465 3672 1.146982 ACCACAACCTACAAGGCCAAT 59.853 47.619 5.01 0.00 39.63 3.16
3467 3674 1.349688 CTACCACAACCTACAAGGCCA 59.650 52.381 5.01 0.00 39.63 5.36
3550 3757 3.515330 GCAGGCTGCAGAATAAAACAT 57.485 42.857 33.33 0.00 44.26 2.71
3576 3783 3.414700 GCCAGTGCAACGACCTCG 61.415 66.667 0.00 0.00 45.86 4.63
3612 3819 1.804151 GCTCACACCGATTGCACTTTA 59.196 47.619 0.00 0.00 0.00 1.85
3740 3949 1.810151 GTGACTCGCAAATAAGGCCAA 59.190 47.619 5.01 0.00 0.00 4.52
3769 3978 8.732531 GTGTACAGGTAACAAATAGGCAATAAA 58.267 33.333 0.00 0.00 41.41 1.40
3771 3980 7.395617 TGTGTACAGGTAACAAATAGGCAATA 58.604 34.615 0.00 0.00 41.41 1.90
3772 3981 6.242396 TGTGTACAGGTAACAAATAGGCAAT 58.758 36.000 0.00 0.00 41.41 3.56
3773 3982 5.622180 TGTGTACAGGTAACAAATAGGCAA 58.378 37.500 0.00 0.00 41.41 4.52
3787 3996 1.553248 TCCTCGGGATTTGTGTACAGG 59.447 52.381 0.00 0.00 0.00 4.00
3788 3997 2.233922 ACTCCTCGGGATTTGTGTACAG 59.766 50.000 0.00 0.00 0.00 2.74
3883 4092 2.529151 GGCACAAACGGATGCATAAAG 58.471 47.619 0.00 0.00 43.93 1.85
3896 4105 0.753867 TAGACACCAGACGGCACAAA 59.246 50.000 0.00 0.00 34.57 2.83
3913 4122 2.002586 CTCAGACGCACAAACCCATAG 58.997 52.381 0.00 0.00 0.00 2.23
4008 4222 8.591114 AGAAAAGAGGTAGTGTAGCTAACATA 57.409 34.615 0.00 0.00 39.83 2.29
4009 4223 7.483580 AGAAAAGAGGTAGTGTAGCTAACAT 57.516 36.000 0.00 0.00 39.83 2.71
4010 4224 6.912951 AGAAAAGAGGTAGTGTAGCTAACA 57.087 37.500 0.00 0.00 39.83 2.41
4011 4225 9.702494 TTTAAGAAAAGAGGTAGTGTAGCTAAC 57.298 33.333 0.00 0.00 37.65 2.34
4047 4271 6.200854 CCTCTGTTCAAATTAAACTGCCAAAC 59.799 38.462 5.52 0.00 0.00 2.93
4051 4275 5.453567 ACCTCTGTTCAAATTAAACTGCC 57.546 39.130 5.52 0.00 0.00 4.85
4108 4332 7.283127 TGTGATCCAGGCTGAAGTATTATTTTC 59.717 37.037 17.94 0.00 0.00 2.29
4116 4340 4.716784 AGTTATGTGATCCAGGCTGAAGTA 59.283 41.667 17.94 0.00 0.00 2.24
4118 4342 4.148128 AGTTATGTGATCCAGGCTGAAG 57.852 45.455 17.94 0.00 0.00 3.02
4157 4381 5.409826 GGGCAGCAACAATAGTAAGCTATAG 59.590 44.000 0.00 0.00 37.20 1.31
4159 4383 4.137543 GGGCAGCAACAATAGTAAGCTAT 58.862 43.478 0.00 0.00 37.20 2.97
4160 4384 3.541632 GGGCAGCAACAATAGTAAGCTA 58.458 45.455 0.00 0.00 37.20 3.32
4161 4385 2.369394 GGGCAGCAACAATAGTAAGCT 58.631 47.619 0.00 0.00 39.08 3.74
4162 4386 1.064060 CGGGCAGCAACAATAGTAAGC 59.936 52.381 0.00 0.00 0.00 3.09
4163 4387 1.670811 CCGGGCAGCAACAATAGTAAG 59.329 52.381 0.00 0.00 0.00 2.34
4168 4392 2.088423 CTTTACCGGGCAGCAACAATA 58.912 47.619 6.32 0.00 0.00 1.90
4172 4396 1.173913 AATCTTTACCGGGCAGCAAC 58.826 50.000 6.32 0.00 0.00 4.17
4175 4399 1.333931 GCTTAATCTTTACCGGGCAGC 59.666 52.381 6.32 0.00 0.00 5.25
4177 4401 3.013921 CAAGCTTAATCTTTACCGGGCA 58.986 45.455 6.32 0.00 0.00 5.36
4178 4402 3.275999 TCAAGCTTAATCTTTACCGGGC 58.724 45.455 6.32 0.00 0.00 6.13
4179 4403 4.514401 ACTCAAGCTTAATCTTTACCGGG 58.486 43.478 6.32 0.00 0.00 5.73
4181 4405 6.721571 TGAACTCAAGCTTAATCTTTACCG 57.278 37.500 0.00 0.00 0.00 4.02
4214 4438 2.170607 GCTAGCCATGACAACCTTCCTA 59.829 50.000 2.29 0.00 0.00 2.94
4215 4439 1.065126 GCTAGCCATGACAACCTTCCT 60.065 52.381 2.29 0.00 0.00 3.36
4222 4446 8.518430 TTAATCAATAAAGCTAGCCATGACAA 57.482 30.769 12.13 4.77 0.00 3.18
4223 4447 8.405531 GTTTAATCAATAAAGCTAGCCATGACA 58.594 33.333 12.13 0.00 34.21 3.58
4224 4448 8.405531 TGTTTAATCAATAAAGCTAGCCATGAC 58.594 33.333 12.13 0.00 34.21 3.06
4241 4465 7.148490 CGTGGACAATGTATCAGTGTTTAATCA 60.148 37.037 4.46 0.00 42.73 2.57
4245 4469 5.785243 TCGTGGACAATGTATCAGTGTTTA 58.215 37.500 4.46 0.00 42.73 2.01
4246 4470 4.637276 TCGTGGACAATGTATCAGTGTTT 58.363 39.130 4.46 0.00 42.73 2.83
4250 4474 2.497675 AGCTCGTGGACAATGTATCAGT 59.502 45.455 0.00 0.00 0.00 3.41
4251 4475 3.170791 AGCTCGTGGACAATGTATCAG 57.829 47.619 0.00 0.00 0.00 2.90
4260 4484 1.005748 CTCAGCAAGCTCGTGGACA 60.006 57.895 0.00 0.00 0.00 4.02
4261 4485 1.739562 CCTCAGCAAGCTCGTGGAC 60.740 63.158 0.00 0.00 0.00 4.02
4286 4522 9.498176 TGTAATAAGTTTTCTTCTAGTTGGACC 57.502 33.333 0.00 0.00 40.91 4.46
4319 4555 4.449405 GTGGCGGATTTTCTAGCTAATCTC 59.551 45.833 13.13 7.90 32.60 2.75
4321 4557 4.381411 AGTGGCGGATTTTCTAGCTAATC 58.619 43.478 0.00 0.00 0.00 1.75
4331 4567 2.036992 TGCAAATCAAGTGGCGGATTTT 59.963 40.909 0.00 0.00 40.68 1.82
4333 4569 1.203052 CTGCAAATCAAGTGGCGGATT 59.797 47.619 0.00 0.00 35.34 3.01
4336 4572 0.813184 ATCTGCAAATCAAGTGGCGG 59.187 50.000 0.00 0.00 0.00 6.13
4337 4573 1.741706 AGATCTGCAAATCAAGTGGCG 59.258 47.619 2.24 0.00 0.00 5.69
4339 4575 6.680810 TGTTTTAGATCTGCAAATCAAGTGG 58.319 36.000 5.18 0.00 0.00 4.00
4341 4577 7.013655 ACACTGTTTTAGATCTGCAAATCAAGT 59.986 33.333 5.18 7.23 0.00 3.16
4373 4609 7.865820 TCTCTACCTTGATTGGAAAGATCATT 58.134 34.615 0.00 0.00 33.82 2.57
4376 4612 7.875554 GGTATCTCTACCTTGATTGGAAAGATC 59.124 40.741 0.00 0.00 43.62 2.75
4378 4614 6.099845 GGGTATCTCTACCTTGATTGGAAAGA 59.900 42.308 2.10 0.00 45.86 2.52
4387 4623 3.767673 GTGTGTGGGTATCTCTACCTTGA 59.232 47.826 2.10 0.00 45.86 3.02
4388 4624 3.769844 AGTGTGTGGGTATCTCTACCTTG 59.230 47.826 2.10 0.00 45.86 3.61
4392 4628 4.017808 ACTGAGTGTGTGGGTATCTCTAC 58.982 47.826 0.00 0.00 0.00 2.59
4395 4631 2.826128 TCACTGAGTGTGTGGGTATCTC 59.174 50.000 12.93 0.00 46.27 2.75
4401 4637 3.796504 GCAATTTTCACTGAGTGTGTGGG 60.797 47.826 12.93 1.04 46.27 4.61
4409 4645 1.973138 CGGCTGCAATTTTCACTGAG 58.027 50.000 0.50 0.00 0.00 3.35
4412 4648 1.290009 GGCGGCTGCAATTTTCACT 59.710 52.632 21.31 0.00 45.35 3.41
4413 4649 0.599728 TTGGCGGCTGCAATTTTCAC 60.600 50.000 21.31 0.00 45.35 3.18
4414 4650 0.319727 CTTGGCGGCTGCAATTTTCA 60.320 50.000 21.31 3.53 45.35 2.69
4415 4651 0.319813 ACTTGGCGGCTGCAATTTTC 60.320 50.000 21.31 0.39 45.35 2.29
4424 4660 3.414136 TTGGTGTGACTTGGCGGCT 62.414 57.895 11.43 0.00 0.00 5.52
4431 4667 5.171476 CGATGAGAATACTTGGTGTGACTT 58.829 41.667 0.00 0.00 0.00 3.01
4434 4670 3.767131 TCCGATGAGAATACTTGGTGTGA 59.233 43.478 0.00 0.00 0.00 3.58
4436 4672 4.020573 TGTTCCGATGAGAATACTTGGTGT 60.021 41.667 0.00 0.00 0.00 4.16
4439 4675 7.969536 ATATTGTTCCGATGAGAATACTTGG 57.030 36.000 0.00 0.00 0.00 3.61
4444 4680 7.990314 TGGACAAATATTGTTCCGATGAGAATA 59.010 33.333 9.87 0.00 45.52 1.75
4445 4681 6.828273 TGGACAAATATTGTTCCGATGAGAAT 59.172 34.615 9.87 0.00 45.52 2.40
4446 4682 6.093495 GTGGACAAATATTGTTCCGATGAGAA 59.907 38.462 9.87 0.00 45.52 2.87
4447 4683 5.584649 GTGGACAAATATTGTTCCGATGAGA 59.415 40.000 9.87 0.00 45.52 3.27
4448 4684 5.353956 TGTGGACAAATATTGTTCCGATGAG 59.646 40.000 9.87 0.00 45.52 2.90
4449 4685 5.249420 TGTGGACAAATATTGTTCCGATGA 58.751 37.500 9.87 0.00 45.52 2.92
4450 4686 5.353956 TCTGTGGACAAATATTGTTCCGATG 59.646 40.000 9.87 0.00 45.52 3.84
4451 4687 5.496556 TCTGTGGACAAATATTGTTCCGAT 58.503 37.500 9.87 0.00 45.52 4.18
4452 4688 4.900684 TCTGTGGACAAATATTGTTCCGA 58.099 39.130 9.87 1.40 45.52 4.55
4453 4689 5.818136 ATCTGTGGACAAATATTGTTCCG 57.182 39.130 9.87 0.00 45.52 4.30
4454 4690 7.697691 CACTATCTGTGGACAAATATTGTTCC 58.302 38.462 8.19 8.19 40.99 3.62
4470 4706 3.027412 AGCGGAATCTGACACTATCTGT 58.973 45.455 0.00 0.00 34.96 3.41
4471 4707 3.724508 AGCGGAATCTGACACTATCTG 57.275 47.619 0.00 0.00 0.00 2.90
4472 4708 3.701542 TGAAGCGGAATCTGACACTATCT 59.298 43.478 0.00 0.00 0.00 1.98
4473 4709 4.046938 TGAAGCGGAATCTGACACTATC 57.953 45.455 0.00 0.00 0.00 2.08
4474 4710 4.081420 AGTTGAAGCGGAATCTGACACTAT 60.081 41.667 0.00 0.00 0.00 2.12
4475 4711 3.258372 AGTTGAAGCGGAATCTGACACTA 59.742 43.478 0.00 0.00 0.00 2.74
4476 4712 2.037772 AGTTGAAGCGGAATCTGACACT 59.962 45.455 0.00 0.00 0.00 3.55
4477 4713 2.413453 GAGTTGAAGCGGAATCTGACAC 59.587 50.000 0.00 0.00 0.00 3.67
4478 4714 2.688507 GAGTTGAAGCGGAATCTGACA 58.311 47.619 0.00 0.00 0.00 3.58
4479 4715 1.656095 CGAGTTGAAGCGGAATCTGAC 59.344 52.381 0.00 0.00 0.00 3.51
4480 4716 1.996292 CGAGTTGAAGCGGAATCTGA 58.004 50.000 0.00 0.00 0.00 3.27
4481 4717 0.371645 GCGAGTTGAAGCGGAATCTG 59.628 55.000 0.00 0.00 0.00 2.90
4482 4718 0.247736 AGCGAGTTGAAGCGGAATCT 59.752 50.000 0.00 0.00 38.61 2.40
4483 4719 0.371645 CAGCGAGTTGAAGCGGAATC 59.628 55.000 0.00 0.00 38.61 2.52
4484 4720 1.021390 CCAGCGAGTTGAAGCGGAAT 61.021 55.000 0.00 0.00 38.61 3.01
4485 4721 1.667830 CCAGCGAGTTGAAGCGGAA 60.668 57.895 0.00 0.00 38.61 4.30
4486 4722 2.048222 CCAGCGAGTTGAAGCGGA 60.048 61.111 0.00 0.00 38.61 5.54
4487 4723 1.667830 TTCCAGCGAGTTGAAGCGG 60.668 57.895 0.00 0.00 38.61 5.52
4488 4724 1.493311 GTTCCAGCGAGTTGAAGCG 59.507 57.895 0.00 0.00 38.61 4.68
4489 4725 1.578206 GGGTTCCAGCGAGTTGAAGC 61.578 60.000 0.00 0.00 36.14 3.86
4490 4726 1.291877 CGGGTTCCAGCGAGTTGAAG 61.292 60.000 0.00 0.00 0.00 3.02
4491 4727 1.301401 CGGGTTCCAGCGAGTTGAA 60.301 57.895 0.00 0.00 0.00 2.69
4492 4728 2.342279 CGGGTTCCAGCGAGTTGA 59.658 61.111 0.00 0.00 0.00 3.18
4493 4729 3.423154 GCGGGTTCCAGCGAGTTG 61.423 66.667 0.00 0.00 0.00 3.16
4494 4730 3.883744 CTGCGGGTTCCAGCGAGTT 62.884 63.158 9.14 0.00 35.87 3.01
4495 4731 4.379243 CTGCGGGTTCCAGCGAGT 62.379 66.667 9.14 0.00 35.87 4.18
4496 4732 4.379243 ACTGCGGGTTCCAGCGAG 62.379 66.667 9.14 9.62 35.87 5.03
4497 4733 4.680237 CACTGCGGGTTCCAGCGA 62.680 66.667 9.14 0.00 35.87 4.93
4498 4734 4.988598 ACACTGCGGGTTCCAGCG 62.989 66.667 9.14 6.82 35.87 5.18
4499 4735 3.357079 CACACTGCGGGTTCCAGC 61.357 66.667 7.00 7.00 33.65 4.85
4500 4736 1.101049 AAACACACTGCGGGTTCCAG 61.101 55.000 0.00 0.00 36.41 3.86
4501 4737 1.077357 AAACACACTGCGGGTTCCA 60.077 52.632 0.00 0.00 0.00 3.53
4502 4738 1.358759 CAAACACACTGCGGGTTCC 59.641 57.895 0.00 0.00 0.00 3.62
4503 4739 1.358759 CCAAACACACTGCGGGTTC 59.641 57.895 0.00 0.00 0.00 3.62
4504 4740 0.968393 AACCAAACACACTGCGGGTT 60.968 50.000 0.00 0.00 33.99 4.11
4505 4741 1.379309 AACCAAACACACTGCGGGT 60.379 52.632 0.00 0.00 0.00 5.28
4506 4742 1.065600 CAACCAAACACACTGCGGG 59.934 57.895 0.00 0.00 0.00 6.13
4507 4743 1.065600 CCAACCAAACACACTGCGG 59.934 57.895 0.00 0.00 0.00 5.69
4508 4744 0.172352 AACCAACCAAACACACTGCG 59.828 50.000 0.00 0.00 0.00 5.18
4509 4745 2.223711 CCTAACCAACCAAACACACTGC 60.224 50.000 0.00 0.00 0.00 4.40
4510 4746 3.283751 TCCTAACCAACCAAACACACTG 58.716 45.455 0.00 0.00 0.00 3.66
4511 4747 3.551846 CTCCTAACCAACCAAACACACT 58.448 45.455 0.00 0.00 0.00 3.55
4512 4748 2.621526 CCTCCTAACCAACCAAACACAC 59.378 50.000 0.00 0.00 0.00 3.82
4513 4749 2.510382 TCCTCCTAACCAACCAAACACA 59.490 45.455 0.00 0.00 0.00 3.72
4514 4750 3.217681 TCCTCCTAACCAACCAAACAC 57.782 47.619 0.00 0.00 0.00 3.32
4515 4751 4.141135 TCAATCCTCCTAACCAACCAAACA 60.141 41.667 0.00 0.00 0.00 2.83
4516 4752 4.403734 TCAATCCTCCTAACCAACCAAAC 58.596 43.478 0.00 0.00 0.00 2.93
4517 4753 4.352595 TCTCAATCCTCCTAACCAACCAAA 59.647 41.667 0.00 0.00 0.00 3.28
4518 4754 3.913799 TCTCAATCCTCCTAACCAACCAA 59.086 43.478 0.00 0.00 0.00 3.67
4519 4755 3.526899 TCTCAATCCTCCTAACCAACCA 58.473 45.455 0.00 0.00 0.00 3.67
4520 4756 4.569719 TTCTCAATCCTCCTAACCAACC 57.430 45.455 0.00 0.00 0.00 3.77
4521 4757 6.180472 TGAATTCTCAATCCTCCTAACCAAC 58.820 40.000 7.05 0.00 0.00 3.77
4522 4758 6.215431 TCTGAATTCTCAATCCTCCTAACCAA 59.785 38.462 7.05 0.00 0.00 3.67
4523 4759 5.726308 TCTGAATTCTCAATCCTCCTAACCA 59.274 40.000 7.05 0.00 0.00 3.67
4524 4760 6.240549 TCTGAATTCTCAATCCTCCTAACC 57.759 41.667 7.05 0.00 0.00 2.85
4525 4761 6.765512 CCTTCTGAATTCTCAATCCTCCTAAC 59.234 42.308 7.05 0.00 0.00 2.34
4526 4762 6.126652 CCCTTCTGAATTCTCAATCCTCCTAA 60.127 42.308 7.05 0.00 0.00 2.69
4527 4763 5.367937 CCCTTCTGAATTCTCAATCCTCCTA 59.632 44.000 7.05 0.00 0.00 2.94
4528 4764 4.165758 CCCTTCTGAATTCTCAATCCTCCT 59.834 45.833 7.05 0.00 0.00 3.69
4529 4765 4.164988 TCCCTTCTGAATTCTCAATCCTCC 59.835 45.833 7.05 0.00 0.00 4.30
4530 4766 5.365021 TCCCTTCTGAATTCTCAATCCTC 57.635 43.478 7.05 0.00 0.00 3.71
4531 4767 5.786121 TTCCCTTCTGAATTCTCAATCCT 57.214 39.130 7.05 0.00 0.00 3.24
4532 4768 6.714356 CCTATTCCCTTCTGAATTCTCAATCC 59.286 42.308 7.05 0.00 36.41 3.01
4533 4769 6.206438 GCCTATTCCCTTCTGAATTCTCAATC 59.794 42.308 7.05 0.00 36.41 2.67
4534 4770 6.067350 GCCTATTCCCTTCTGAATTCTCAAT 58.933 40.000 7.05 0.00 36.41 2.57
4535 4771 5.044919 TGCCTATTCCCTTCTGAATTCTCAA 60.045 40.000 7.05 0.00 36.41 3.02
4536 4772 4.474651 TGCCTATTCCCTTCTGAATTCTCA 59.525 41.667 7.05 0.00 36.41 3.27
4537 4773 5.041191 TGCCTATTCCCTTCTGAATTCTC 57.959 43.478 7.05 0.00 36.41 2.87
4538 4774 5.383476 CATGCCTATTCCCTTCTGAATTCT 58.617 41.667 7.05 0.00 36.41 2.40
4539 4775 4.522022 CCATGCCTATTCCCTTCTGAATTC 59.478 45.833 0.00 0.00 36.41 2.17
4540 4776 4.477249 CCATGCCTATTCCCTTCTGAATT 58.523 43.478 0.00 0.00 36.41 2.17
4541 4777 3.181425 CCCATGCCTATTCCCTTCTGAAT 60.181 47.826 0.00 0.00 38.47 2.57
4542 4778 2.175499 CCCATGCCTATTCCCTTCTGAA 59.825 50.000 0.00 0.00 0.00 3.02
4543 4779 1.776667 CCCATGCCTATTCCCTTCTGA 59.223 52.381 0.00 0.00 0.00 3.27
4544 4780 1.776667 TCCCATGCCTATTCCCTTCTG 59.223 52.381 0.00 0.00 0.00 3.02
4545 4781 2.212752 TCCCATGCCTATTCCCTTCT 57.787 50.000 0.00 0.00 0.00 2.85
4546 4782 3.532641 AATCCCATGCCTATTCCCTTC 57.467 47.619 0.00 0.00 0.00 3.46
4547 4783 6.038609 TCTATAATCCCATGCCTATTCCCTT 58.961 40.000 0.00 0.00 0.00 3.95
4548 4784 5.430089 GTCTATAATCCCATGCCTATTCCCT 59.570 44.000 0.00 0.00 0.00 4.20
4549 4785 5.430089 AGTCTATAATCCCATGCCTATTCCC 59.570 44.000 0.00 0.00 0.00 3.97
4550 4786 6.385467 AGAGTCTATAATCCCATGCCTATTCC 59.615 42.308 0.00 0.00 0.00 3.01
4551 4787 7.430760 AGAGTCTATAATCCCATGCCTATTC 57.569 40.000 0.00 0.00 0.00 1.75
4552 4788 8.763601 GTTAGAGTCTATAATCCCATGCCTATT 58.236 37.037 0.00 0.00 0.00 1.73
4553 4789 8.125733 AGTTAGAGTCTATAATCCCATGCCTAT 58.874 37.037 0.00 0.00 0.00 2.57
4554 4790 7.479579 AGTTAGAGTCTATAATCCCATGCCTA 58.520 38.462 0.00 0.00 0.00 3.93
4555 4791 6.326970 AGTTAGAGTCTATAATCCCATGCCT 58.673 40.000 0.00 0.00 0.00 4.75
4556 4792 6.351456 GGAGTTAGAGTCTATAATCCCATGCC 60.351 46.154 13.45 0.00 0.00 4.40
4557 4793 6.351456 GGGAGTTAGAGTCTATAATCCCATGC 60.351 46.154 26.24 11.44 43.86 4.06
4558 4794 7.176589 GGGAGTTAGAGTCTATAATCCCATG 57.823 44.000 26.24 0.00 43.86 3.66
4561 4797 6.095720 CGATGGGAGTTAGAGTCTATAATCCC 59.904 46.154 25.35 25.35 44.53 3.85
4562 4798 6.660094 ACGATGGGAGTTAGAGTCTATAATCC 59.340 42.308 14.99 14.99 0.00 3.01
4563 4799 7.690952 ACGATGGGAGTTAGAGTCTATAATC 57.309 40.000 0.00 1.66 0.00 1.75
4564 4800 8.480133 AAACGATGGGAGTTAGAGTCTATAAT 57.520 34.615 0.00 0.00 0.00 1.28
4565 4801 7.893124 AAACGATGGGAGTTAGAGTCTATAA 57.107 36.000 0.00 0.00 0.00 0.98
4566 4802 7.893124 AAAACGATGGGAGTTAGAGTCTATA 57.107 36.000 0.00 0.00 0.00 1.31
4567 4803 6.793505 AAAACGATGGGAGTTAGAGTCTAT 57.206 37.500 0.00 0.00 0.00 1.98
4568 4804 7.893124 ATAAAACGATGGGAGTTAGAGTCTA 57.107 36.000 0.00 0.00 0.00 2.59
4569 4805 6.793505 ATAAAACGATGGGAGTTAGAGTCT 57.206 37.500 0.00 0.00 0.00 3.24
4570 4806 8.937634 TTAATAAAACGATGGGAGTTAGAGTC 57.062 34.615 0.00 0.00 0.00 3.36
4573 4809 9.991906 CCTATTAATAAAACGATGGGAGTTAGA 57.008 33.333 0.00 0.00 0.00 2.10
4574 4810 9.216117 CCCTATTAATAAAACGATGGGAGTTAG 57.784 37.037 7.61 0.00 34.34 2.34
4575 4811 8.158789 CCCCTATTAATAAAACGATGGGAGTTA 58.841 37.037 12.96 0.00 34.34 2.24
4576 4812 7.002276 CCCCTATTAATAAAACGATGGGAGTT 58.998 38.462 12.96 0.00 34.34 3.01
4577 4813 6.330778 TCCCCTATTAATAAAACGATGGGAGT 59.669 38.462 12.96 0.00 33.51 3.85
4578 4814 6.775708 TCCCCTATTAATAAAACGATGGGAG 58.224 40.000 12.96 5.90 33.51 4.30
4579 4815 6.240060 CCTCCCCTATTAATAAAACGATGGGA 60.240 42.308 12.96 10.07 36.87 4.37
4580 4816 5.944007 CCTCCCCTATTAATAAAACGATGGG 59.056 44.000 6.70 6.70 0.00 4.00
4581 4817 5.944007 CCCTCCCCTATTAATAAAACGATGG 59.056 44.000 0.00 0.00 0.00 3.51
4582 4818 5.944007 CCCCTCCCCTATTAATAAAACGATG 59.056 44.000 0.00 0.00 0.00 3.84
4583 4819 5.014860 CCCCCTCCCCTATTAATAAAACGAT 59.985 44.000 0.00 0.00 0.00 3.73
4584 4820 4.351704 CCCCCTCCCCTATTAATAAAACGA 59.648 45.833 0.00 0.00 0.00 3.85
4585 4821 4.105217 ACCCCCTCCCCTATTAATAAAACG 59.895 45.833 0.00 0.00 0.00 3.60
4586 4822 5.391256 CACCCCCTCCCCTATTAATAAAAC 58.609 45.833 0.00 0.00 0.00 2.43
4587 4823 4.420891 CCACCCCCTCCCCTATTAATAAAA 59.579 45.833 0.00 0.00 0.00 1.52
4588 4824 3.991621 CCACCCCCTCCCCTATTAATAAA 59.008 47.826 0.00 0.00 0.00 1.40
4589 4825 3.615766 CCACCCCCTCCCCTATTAATAA 58.384 50.000 0.00 0.00 0.00 1.40
4590 4826 2.157754 CCCACCCCCTCCCCTATTAATA 60.158 54.545 0.00 0.00 0.00 0.98
4591 4827 1.419019 CCCACCCCCTCCCCTATTAAT 60.419 57.143 0.00 0.00 0.00 1.40
4592 4828 0.028433 CCCACCCCCTCCCCTATTAA 60.028 60.000 0.00 0.00 0.00 1.40
4593 4829 0.942561 TCCCACCCCCTCCCCTATTA 60.943 60.000 0.00 0.00 0.00 0.98
4594 4830 1.855690 TTCCCACCCCCTCCCCTATT 61.856 60.000 0.00 0.00 0.00 1.73
4595 4831 1.632984 ATTCCCACCCCCTCCCCTAT 61.633 60.000 0.00 0.00 0.00 2.57
4596 4832 1.855690 AATTCCCACCCCCTCCCCTA 61.856 60.000 0.00 0.00 0.00 3.53
4597 4833 3.237595 AATTCCCACCCCCTCCCCT 62.238 63.158 0.00 0.00 0.00 4.79
4598 4834 2.620464 AATTCCCACCCCCTCCCC 60.620 66.667 0.00 0.00 0.00 4.81
4599 4835 2.689813 CAATTCCCACCCCCTCCC 59.310 66.667 0.00 0.00 0.00 4.30
4600 4836 1.514864 TTCCAATTCCCACCCCCTCC 61.515 60.000 0.00 0.00 0.00 4.30
4601 4837 0.411848 TTTCCAATTCCCACCCCCTC 59.588 55.000 0.00 0.00 0.00 4.30
4602 4838 0.413434 CTTTCCAATTCCCACCCCCT 59.587 55.000 0.00 0.00 0.00 4.79
4603 4839 0.617535 CCTTTCCAATTCCCACCCCC 60.618 60.000 0.00 0.00 0.00 5.40
4604 4840 0.411848 TCCTTTCCAATTCCCACCCC 59.588 55.000 0.00 0.00 0.00 4.95
4605 4841 2.319025 TTCCTTTCCAATTCCCACCC 57.681 50.000 0.00 0.00 0.00 4.61
4606 4842 3.582647 ACAATTCCTTTCCAATTCCCACC 59.417 43.478 0.00 0.00 0.00 4.61
4607 4843 4.890158 ACAATTCCTTTCCAATTCCCAC 57.110 40.909 0.00 0.00 0.00 4.61
4608 4844 5.903198 AAACAATTCCTTTCCAATTCCCA 57.097 34.783 0.00 0.00 0.00 4.37
4609 4845 7.450074 ACTAAAACAATTCCTTTCCAATTCCC 58.550 34.615 0.00 0.00 0.00 3.97
4610 4846 8.902540 AACTAAAACAATTCCTTTCCAATTCC 57.097 30.769 0.00 0.00 0.00 3.01
4614 4850 9.191479 TGACTAACTAAAACAATTCCTTTCCAA 57.809 29.630 0.00 0.00 0.00 3.53
4615 4851 8.754991 TGACTAACTAAAACAATTCCTTTCCA 57.245 30.769 0.00 0.00 0.00 3.53
4631 4867 9.475620 TGATGAAGGACTAAGATTGACTAACTA 57.524 33.333 0.00 0.00 0.00 2.24
4632 4868 8.367660 TGATGAAGGACTAAGATTGACTAACT 57.632 34.615 0.00 0.00 0.00 2.24
4636 4872 8.986991 AGTTATGATGAAGGACTAAGATTGACT 58.013 33.333 0.00 0.00 0.00 3.41
4637 4873 9.606631 AAGTTATGATGAAGGACTAAGATTGAC 57.393 33.333 0.00 0.00 0.00 3.18
4651 4887 9.967451 TGGGAAGTTAATGTAAGTTATGATGAA 57.033 29.630 0.00 0.00 31.78 2.57
4654 4890 9.920946 ACATGGGAAGTTAATGTAAGTTATGAT 57.079 29.630 0.00 0.00 32.86 2.45
4655 4891 9.391006 GACATGGGAAGTTAATGTAAGTTATGA 57.609 33.333 0.00 0.00 34.74 2.15
4656 4892 9.396022 AGACATGGGAAGTTAATGTAAGTTATG 57.604 33.333 0.00 0.00 34.74 1.90
4659 4895 8.603304 ACTAGACATGGGAAGTTAATGTAAGTT 58.397 33.333 0.00 0.00 34.74 2.66
4660 4896 8.147244 ACTAGACATGGGAAGTTAATGTAAGT 57.853 34.615 0.00 0.00 34.74 2.24
4661 4897 9.099454 GAACTAGACATGGGAAGTTAATGTAAG 57.901 37.037 0.00 0.00 34.74 2.34
4662 4898 8.044908 GGAACTAGACATGGGAAGTTAATGTAA 58.955 37.037 0.00 0.00 34.74 2.41
4663 4899 7.402071 AGGAACTAGACATGGGAAGTTAATGTA 59.598 37.037 0.00 0.00 36.02 2.29
4664 4900 6.215636 AGGAACTAGACATGGGAAGTTAATGT 59.784 38.462 0.00 0.00 36.02 2.71
4665 4901 6.653989 AGGAACTAGACATGGGAAGTTAATG 58.346 40.000 0.00 0.00 36.02 1.90
4666 4902 6.407074 CGAGGAACTAGACATGGGAAGTTAAT 60.407 42.308 0.00 2.28 41.55 1.40
4667 4903 5.105473 CGAGGAACTAGACATGGGAAGTTAA 60.105 44.000 0.00 0.00 41.55 2.01
4668 4904 4.401519 CGAGGAACTAGACATGGGAAGTTA 59.598 45.833 0.00 0.00 41.55 2.24
4669 4905 3.195825 CGAGGAACTAGACATGGGAAGTT 59.804 47.826 0.00 8.13 41.55 2.66
4670 4906 2.761208 CGAGGAACTAGACATGGGAAGT 59.239 50.000 0.00 0.00 41.55 3.01
4671 4907 2.482142 GCGAGGAACTAGACATGGGAAG 60.482 54.545 0.00 0.00 41.55 3.46
4672 4908 1.480954 GCGAGGAACTAGACATGGGAA 59.519 52.381 0.00 0.00 41.55 3.97
4673 4909 1.112113 GCGAGGAACTAGACATGGGA 58.888 55.000 0.00 0.00 41.55 4.37
4674 4910 0.105039 GGCGAGGAACTAGACATGGG 59.895 60.000 0.00 0.00 39.57 4.00
4675 4911 0.824109 TGGCGAGGAACTAGACATGG 59.176 55.000 0.00 0.00 46.30 3.66
4679 4915 4.000988 TGAAAATTGGCGAGGAACTAGAC 58.999 43.478 0.00 0.00 41.55 2.59
4680 4916 4.280436 TGAAAATTGGCGAGGAACTAGA 57.720 40.909 0.00 0.00 41.55 2.43
4681 4917 4.635765 TCATGAAAATTGGCGAGGAACTAG 59.364 41.667 0.00 0.00 41.55 2.57
4682 4918 4.584874 TCATGAAAATTGGCGAGGAACTA 58.415 39.130 0.00 0.00 41.55 2.24
4684 4920 3.848272 TCATGAAAATTGGCGAGGAAC 57.152 42.857 0.00 0.00 0.00 3.62
4685 4921 3.056891 GGTTCATGAAAATTGGCGAGGAA 60.057 43.478 10.35 0.00 0.00 3.36
4686 4922 2.491693 GGTTCATGAAAATTGGCGAGGA 59.508 45.455 10.35 0.00 0.00 3.71
4687 4923 2.230992 TGGTTCATGAAAATTGGCGAGG 59.769 45.455 10.35 0.00 0.00 4.63
4688 4924 3.574284 TGGTTCATGAAAATTGGCGAG 57.426 42.857 10.35 0.00 0.00 5.03
4689 4925 4.054671 GTTTGGTTCATGAAAATTGGCGA 58.945 39.130 10.35 0.00 0.00 5.54
4690 4926 3.806521 TGTTTGGTTCATGAAAATTGGCG 59.193 39.130 10.35 0.00 0.00 5.69
4691 4927 5.277925 CCTTGTTTGGTTCATGAAAATTGGC 60.278 40.000 10.35 0.00 0.00 4.52
4692 4928 5.239087 CCCTTGTTTGGTTCATGAAAATTGG 59.761 40.000 10.35 4.93 0.00 3.16
4693 4929 6.054295 TCCCTTGTTTGGTTCATGAAAATTG 58.946 36.000 10.35 0.00 0.00 2.32
4694 4930 6.245890 TCCCTTGTTTGGTTCATGAAAATT 57.754 33.333 10.35 0.00 0.00 1.82
4695 4931 5.885449 TCCCTTGTTTGGTTCATGAAAAT 57.115 34.783 10.35 0.00 0.00 1.82
4696 4932 5.683876 TTCCCTTGTTTGGTTCATGAAAA 57.316 34.783 10.35 0.00 0.00 2.29
4697 4933 5.885449 ATTCCCTTGTTTGGTTCATGAAA 57.115 34.783 10.35 0.00 0.00 2.69
4698 4934 5.835819 TGTATTCCCTTGTTTGGTTCATGAA 59.164 36.000 3.38 3.38 0.00 2.57
4699 4935 5.389520 TGTATTCCCTTGTTTGGTTCATGA 58.610 37.500 0.00 0.00 0.00 3.07
4700 4936 5.243730 ACTGTATTCCCTTGTTTGGTTCATG 59.756 40.000 0.00 0.00 0.00 3.07
4701 4937 5.393866 ACTGTATTCCCTTGTTTGGTTCAT 58.606 37.500 0.00 0.00 0.00 2.57
4702 4938 4.798882 ACTGTATTCCCTTGTTTGGTTCA 58.201 39.130 0.00 0.00 0.00 3.18
4703 4939 5.784578 AACTGTATTCCCTTGTTTGGTTC 57.215 39.130 0.00 0.00 0.00 3.62
4704 4940 5.897250 AGAAACTGTATTCCCTTGTTTGGTT 59.103 36.000 0.00 0.00 32.01 3.67
4705 4941 5.454966 AGAAACTGTATTCCCTTGTTTGGT 58.545 37.500 0.00 0.00 32.01 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.