Multiple sequence alignment - TraesCS5D01G206100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G206100 chr5D 100.000 5544 0 0 1 5544 312372324 312366781 0.000000e+00 10238.0
1 TraesCS5D01G206100 chr5D 97.715 963 19 3 4584 5544 103173839 103172878 0.000000e+00 1653.0
2 TraesCS5D01G206100 chr5D 97.706 959 20 2 4587 5544 103163265 103162308 0.000000e+00 1648.0
3 TraesCS5D01G206100 chr5D 75.709 1482 303 38 2527 3987 312068997 312067552 0.000000e+00 689.0
4 TraesCS5D01G206100 chr5D 98.623 363 5 0 1 363 387140359 387140721 1.300000e-180 643.0
5 TraesCS5D01G206100 chr5D 98.623 363 5 0 1 363 400036264 400035902 1.300000e-180 643.0
6 TraesCS5D01G206100 chr5D 98.347 363 6 0 1 363 312379627 312379265 6.060000e-179 638.0
7 TraesCS5D01G206100 chr5D 95.427 328 14 1 363 690 473444237 473443911 6.360000e-144 521.0
8 TraesCS5D01G206100 chr5D 97.561 123 3 0 912 1034 326131426 326131548 1.560000e-50 211.0
9 TraesCS5D01G206100 chr5D 98.148 54 1 0 910 963 29881651 29881704 1.640000e-15 95.3
10 TraesCS5D01G206100 chr5A 96.945 2750 78 3 1839 4582 406483900 406481151 0.000000e+00 4608.0
11 TraesCS5D01G206100 chr5A 94.817 328 17 0 363 690 677173244 677173571 3.830000e-141 512.0
12 TraesCS5D01G206100 chr5A 86.034 358 15 13 1492 1848 406484504 406484181 8.840000e-93 351.0
13 TraesCS5D01G206100 chr5A 75.537 605 131 17 2363 2957 405018681 405018084 1.180000e-71 281.0
14 TraesCS5D01G206100 chr5A 75.162 616 135 16 3330 3935 405039746 405039139 1.970000e-69 274.0
15 TraesCS5D01G206100 chr5A 98.374 123 2 0 912 1034 51738712 51738590 3.360000e-52 217.0
16 TraesCS5D01G206100 chr5A 97.619 126 3 0 912 1037 582654375 582654250 3.360000e-52 217.0
17 TraesCS5D01G206100 chr5A 89.116 147 12 3 764 908 406485306 406485162 4.410000e-41 180.0
18 TraesCS5D01G206100 chr5A 93.651 63 2 2 1431 1492 246293567 246293628 5.910000e-15 93.5
19 TraesCS5D01G206100 chr5B 95.473 1215 52 3 3368 4581 358631318 358630106 0.000000e+00 1936.0
20 TraesCS5D01G206100 chr5B 94.627 1098 59 0 2272 3369 358637962 358636865 0.000000e+00 1701.0
21 TraesCS5D01G206100 chr5B 76.783 1598 308 44 2382 3954 358386299 358384740 0.000000e+00 837.0
22 TraesCS5D01G206100 chr5B 91.268 355 31 0 1853 2207 358638312 358637958 8.350000e-133 484.0
23 TraesCS5D01G206100 chr5B 81.370 365 44 10 1073 1418 358638989 358638630 5.470000e-70 276.0
24 TraesCS5D01G206100 chr5B 74.395 703 151 28 2276 2963 358381736 358381048 1.970000e-69 274.0
25 TraesCS5D01G206100 chr5B 83.700 227 27 5 690 908 358639259 358639035 7.280000e-49 206.0
26 TraesCS5D01G206100 chr5B 94.574 129 6 1 912 1039 38034208 38034080 1.220000e-46 198.0
27 TraesCS5D01G206100 chr5B 93.617 47 2 1 1730 1775 358638451 358638405 9.970000e-08 69.4
28 TraesCS5D01G206100 chr1D 98.335 961 15 1 4585 5544 11876337 11877297 0.000000e+00 1685.0
29 TraesCS5D01G206100 chr4D 98.127 961 17 1 4585 5544 506902930 506901970 0.000000e+00 1674.0
30 TraesCS5D01G206100 chrUn 97.925 964 19 1 4582 5544 21646124 21645161 0.000000e+00 1668.0
31 TraesCS5D01G206100 chrUn 95.082 61 1 2 1433 1492 323910735 323910794 1.640000e-15 95.3
32 TraesCS5D01G206100 chrUn 95.082 61 1 2 1433 1492 323913910 323913969 1.640000e-15 95.3
33 TraesCS5D01G206100 chrUn 95.082 61 1 2 1433 1492 355880483 355880542 1.640000e-15 95.3
34 TraesCS5D01G206100 chrUn 95.082 61 1 2 1433 1492 391739895 391739836 1.640000e-15 95.3
35 TraesCS5D01G206100 chr6D 97.817 962 18 3 4584 5544 68704160 68703201 0.000000e+00 1657.0
36 TraesCS5D01G206100 chr6D 97.815 961 20 1 4585 5544 322199840 322198880 0.000000e+00 1657.0
37 TraesCS5D01G206100 chr6D 97.607 961 22 1 4585 5544 416446974 416446014 0.000000e+00 1646.0
38 TraesCS5D01G206100 chr6D 98.072 363 6 1 1 363 186252987 186253348 1.010000e-176 630.0
39 TraesCS5D01G206100 chr7D 97.609 962 22 1 4584 5544 575668091 575669052 0.000000e+00 1648.0
40 TraesCS5D01G206100 chr7D 98.118 372 6 1 1 372 469676301 469676671 0.000000e+00 647.0
41 TraesCS5D01G206100 chr7D 98.619 362 5 0 1 362 105370961 105371322 4.680000e-180 641.0
42 TraesCS5D01G206100 chr7D 96.341 328 12 0 363 690 400187919 400188246 1.760000e-149 540.0
43 TraesCS5D01G206100 chr7D 95.732 328 14 0 363 690 513327449 513327776 3.800000e-146 529.0
44 TraesCS5D01G206100 chr7D 95.427 328 15 0 363 690 448517282 448517609 1.770000e-144 523.0
45 TraesCS5D01G206100 chr2D 98.356 365 6 0 1 365 478843015 478842651 4.680000e-180 641.0
46 TraesCS5D01G206100 chr2D 98.347 363 6 0 1 363 15905242 15905604 6.060000e-179 638.0
47 TraesCS5D01G206100 chr2D 98.347 363 6 0 1 363 586476905 586476543 6.060000e-179 638.0
48 TraesCS5D01G206100 chr2D 95.732 328 14 0 363 690 121769410 121769737 3.800000e-146 529.0
49 TraesCS5D01G206100 chr2D 94.611 334 18 0 363 696 109556271 109555938 8.230000e-143 518.0
50 TraesCS5D01G206100 chr3D 95.732 328 14 0 363 690 188363816 188363489 3.800000e-146 529.0
51 TraesCS5D01G206100 chr3D 94.864 331 17 0 363 693 511254011 511253681 8.230000e-143 518.0
52 TraesCS5D01G206100 chr3D 92.248 129 10 0 906 1034 19362918 19363046 3.410000e-42 183.0
53 TraesCS5D01G206100 chr4B 95.181 332 16 0 363 694 43769582 43769251 4.920000e-145 525.0
54 TraesCS5D01G206100 chr4B 98.400 125 2 0 911 1035 368108385 368108509 2.600000e-53 220.0
55 TraesCS5D01G206100 chr4B 92.424 66 3 2 1429 1492 658774478 658774543 5.910000e-15 93.5
56 TraesCS5D01G206100 chr7A 93.694 333 20 1 363 695 84709809 84710140 1.070000e-136 497.0
57 TraesCS5D01G206100 chr7A 92.711 343 23 2 363 705 26793121 26793461 1.390000e-135 494.0
58 TraesCS5D01G206100 chr7A 99.206 126 1 0 909 1034 717822973 717823098 1.550000e-55 228.0
59 TraesCS5D01G206100 chr7A 98.374 123 2 0 912 1034 620199857 620199735 3.360000e-52 217.0
60 TraesCS5D01G206100 chr7A 97.581 124 3 0 911 1034 511950737 511950860 4.350000e-51 213.0
61 TraesCS5D01G206100 chr3A 93.598 328 21 0 363 690 632421376 632421703 1.790000e-134 490.0
62 TraesCS5D01G206100 chr3A 98.400 125 2 0 910 1034 580595480 580595604 2.600000e-53 220.0
63 TraesCS5D01G206100 chr3A 93.750 64 3 1 1430 1492 368745013 368744950 1.640000e-15 95.3
64 TraesCS5D01G206100 chr2B 93.353 331 22 0 363 693 103434104 103434434 1.790000e-134 490.0
65 TraesCS5D01G206100 chr2B 99.194 124 1 0 911 1034 103257396 103257519 2.010000e-54 224.0
66 TraesCS5D01G206100 chr2B 99.194 124 1 0 911 1034 437818876 437818999 2.010000e-54 224.0
67 TraesCS5D01G206100 chr1A 100.000 123 0 0 912 1034 64852411 64852533 1.550000e-55 228.0
68 TraesCS5D01G206100 chr1A 98.387 124 2 0 912 1035 56914476 56914599 9.350000e-53 219.0
69 TraesCS5D01G206100 chr1A 96.032 126 5 0 909 1034 368972237 368972362 7.280000e-49 206.0
70 TraesCS5D01G206100 chr1A 88.618 123 14 0 912 1034 115363914 115364036 3.460000e-32 150.0
71 TraesCS5D01G206100 chr3B 99.194 124 1 0 911 1034 654654212 654654335 2.010000e-54 224.0
72 TraesCS5D01G206100 chr1B 99.187 123 1 0 912 1034 299981584 299981706 7.230000e-54 222.0
73 TraesCS5D01G206100 chr1B 92.424 66 2 3 1430 1492 461239153 461239218 2.130000e-14 91.6
74 TraesCS5D01G206100 chr6A 97.500 120 3 0 915 1034 404684643 404684524 7.280000e-49 206.0
75 TraesCS5D01G206100 chr7B 93.651 63 3 1 1430 1492 574478434 574478495 5.910000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G206100 chr5D 312366781 312372324 5543 True 10238.00 10238 100.000000 1 5544 1 chr5D.!!$R4 5543
1 TraesCS5D01G206100 chr5D 103172878 103173839 961 True 1653.00 1653 97.715000 4584 5544 1 chr5D.!!$R2 960
2 TraesCS5D01G206100 chr5D 103162308 103163265 957 True 1648.00 1648 97.706000 4587 5544 1 chr5D.!!$R1 957
3 TraesCS5D01G206100 chr5D 312067552 312068997 1445 True 689.00 689 75.709000 2527 3987 1 chr5D.!!$R3 1460
4 TraesCS5D01G206100 chr5A 406481151 406485306 4155 True 1713.00 4608 90.698333 764 4582 3 chr5A.!!$R5 3818
5 TraesCS5D01G206100 chr5A 405018084 405018681 597 True 281.00 281 75.537000 2363 2957 1 chr5A.!!$R2 594
6 TraesCS5D01G206100 chr5A 405039139 405039746 607 True 274.00 274 75.162000 3330 3935 1 chr5A.!!$R3 605
7 TraesCS5D01G206100 chr5B 358630106 358631318 1212 True 1936.00 1936 95.473000 3368 4581 1 chr5B.!!$R2 1213
8 TraesCS5D01G206100 chr5B 358381048 358386299 5251 True 555.50 837 75.589000 2276 3954 2 chr5B.!!$R3 1678
9 TraesCS5D01G206100 chr5B 358636865 358639259 2394 True 547.28 1701 88.916400 690 3369 5 chr5B.!!$R4 2679
10 TraesCS5D01G206100 chr1D 11876337 11877297 960 False 1685.00 1685 98.335000 4585 5544 1 chr1D.!!$F1 959
11 TraesCS5D01G206100 chr4D 506901970 506902930 960 True 1674.00 1674 98.127000 4585 5544 1 chr4D.!!$R1 959
12 TraesCS5D01G206100 chrUn 21645161 21646124 963 True 1668.00 1668 97.925000 4582 5544 1 chrUn.!!$R1 962
13 TraesCS5D01G206100 chr6D 68703201 68704160 959 True 1657.00 1657 97.817000 4584 5544 1 chr6D.!!$R1 960
14 TraesCS5D01G206100 chr6D 322198880 322199840 960 True 1657.00 1657 97.815000 4585 5544 1 chr6D.!!$R2 959
15 TraesCS5D01G206100 chr6D 416446014 416446974 960 True 1646.00 1646 97.607000 4585 5544 1 chr6D.!!$R3 959
16 TraesCS5D01G206100 chr7D 575668091 575669052 961 False 1648.00 1648 97.609000 4584 5544 1 chr7D.!!$F6 960

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
605 606 0.036306 GACGTGATCTGGGTTTGGGT 59.964 55.0 0.00 0.00 0.00 4.51 F
606 607 0.036306 ACGTGATCTGGGTTTGGGTC 59.964 55.0 0.00 0.00 0.00 4.46 F
933 942 0.099082 GGAAGCTCCTCTGACGTACG 59.901 60.0 15.01 15.01 32.53 3.67 F
934 943 0.099082 GAAGCTCCTCTGACGTACGG 59.901 60.0 21.06 1.50 0.00 4.02 F
1380 1667 0.178891 AGGAGTGTGATGGTCCTGGT 60.179 55.0 0.00 0.00 39.36 4.00 F
1381 1668 0.250513 GGAGTGTGATGGTCCTGGTC 59.749 60.0 0.00 0.00 0.00 4.02 F
1382 1669 0.250513 GAGTGTGATGGTCCTGGTCC 59.749 60.0 2.75 2.75 0.00 4.46 F
1460 1747 0.329261 TTCTACTCCCTCCGTTCGGA 59.671 55.0 13.34 13.34 0.00 4.55 F
3835 4455 0.391661 ACCAGCCAGTACTGAATGCG 60.392 55.0 24.68 15.92 40.25 4.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1976 2584 0.396435 TCGGAGCCTTTTCAGCTTCA 59.604 50.000 0.00 0.00 41.75 3.02 R
2173 2781 0.668535 GAGGATTTATGTTGGCCCGC 59.331 55.000 0.00 0.00 0.00 6.13 R
2646 3257 2.203153 AAGCAAACCCGACTGCGT 60.203 55.556 0.00 0.00 43.51 5.24 R
3129 3740 1.790623 CCACAGTTCAGAAACCGTACG 59.209 52.381 8.69 8.69 35.92 3.67 R
3346 3963 7.008992 GCATTCTGTAAATTTCTGTTGCATCTC 59.991 37.037 0.00 0.00 0.00 2.75 R
3697 4317 2.676839 CTGGCTCTTGCAAGTACTGATG 59.323 50.000 25.19 8.01 41.91 3.07 R
3835 4455 2.985896 TGCAGTCCTTATTGCTACACC 58.014 47.619 0.00 0.00 39.02 4.16 R
4015 4642 0.318614 CACCGTTTGGCATTTCGCTT 60.319 50.000 0.00 0.00 41.91 4.68 R
5102 8364 8.212312 TGCCTTTAATATTACTCCACCGAATTA 58.788 33.333 0.00 0.00 0.00 1.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.410466 CTACACCTCTCCCTCTCGC 58.590 63.158 0.00 0.00 0.00 5.03
19 20 0.394488 CTACACCTCTCCCTCTCGCA 60.394 60.000 0.00 0.00 0.00 5.10
20 21 0.394488 TACACCTCTCCCTCTCGCAG 60.394 60.000 0.00 0.00 0.00 5.18
21 22 1.379176 CACCTCTCCCTCTCGCAGA 60.379 63.158 0.00 0.00 0.00 4.26
22 23 0.967887 CACCTCTCCCTCTCGCAGAA 60.968 60.000 0.00 0.00 34.09 3.02
23 24 0.682855 ACCTCTCCCTCTCGCAGAAG 60.683 60.000 0.00 0.00 34.09 2.85
24 25 1.437160 CTCTCCCTCTCGCAGAAGC 59.563 63.158 0.00 0.00 34.09 3.86
25 26 1.000270 TCTCCCTCTCGCAGAAGCT 60.000 57.895 0.00 0.00 39.10 3.74
26 27 0.613292 TCTCCCTCTCGCAGAAGCTT 60.613 55.000 0.00 0.00 39.10 3.74
27 28 0.459934 CTCCCTCTCGCAGAAGCTTG 60.460 60.000 2.10 0.00 39.10 4.01
28 29 1.449246 CCCTCTCGCAGAAGCTTGG 60.449 63.158 2.10 0.00 39.10 3.61
29 30 2.105466 CCTCTCGCAGAAGCTTGGC 61.105 63.158 2.10 6.67 39.10 4.52
46 47 4.821589 CGAAGCCCTGCCGAGACC 62.822 72.222 0.00 0.00 0.00 3.85
47 48 4.475135 GAAGCCCTGCCGAGACCC 62.475 72.222 0.00 0.00 0.00 4.46
52 53 4.208686 CCTGCCGAGACCCGCTAC 62.209 72.222 0.00 0.00 36.84 3.58
53 54 3.449227 CTGCCGAGACCCGCTACA 61.449 66.667 0.00 0.00 36.84 2.74
54 55 2.758327 TGCCGAGACCCGCTACAT 60.758 61.111 0.00 0.00 36.84 2.29
55 56 2.027751 GCCGAGACCCGCTACATC 59.972 66.667 0.00 0.00 36.84 3.06
56 57 2.728817 CCGAGACCCGCTACATCC 59.271 66.667 0.00 0.00 36.84 3.51
57 58 2.125326 CCGAGACCCGCTACATCCA 61.125 63.158 0.00 0.00 36.84 3.41
58 59 1.065928 CGAGACCCGCTACATCCAC 59.934 63.158 0.00 0.00 0.00 4.02
59 60 1.442148 GAGACCCGCTACATCCACC 59.558 63.158 0.00 0.00 0.00 4.61
60 61 1.305802 AGACCCGCTACATCCACCA 60.306 57.895 0.00 0.00 0.00 4.17
61 62 1.153429 GACCCGCTACATCCACCAC 60.153 63.158 0.00 0.00 0.00 4.16
62 63 2.189521 CCCGCTACATCCACCACC 59.810 66.667 0.00 0.00 0.00 4.61
63 64 2.665089 CCCGCTACATCCACCACCA 61.665 63.158 0.00 0.00 0.00 4.17
64 65 1.449601 CCGCTACATCCACCACCAC 60.450 63.158 0.00 0.00 0.00 4.16
65 66 1.809619 CGCTACATCCACCACCACG 60.810 63.158 0.00 0.00 0.00 4.94
66 67 2.106683 GCTACATCCACCACCACGC 61.107 63.158 0.00 0.00 0.00 5.34
67 68 1.449601 CTACATCCACCACCACGCC 60.450 63.158 0.00 0.00 0.00 5.68
68 69 3.303761 TACATCCACCACCACGCCG 62.304 63.158 0.00 0.00 0.00 6.46
69 70 4.697756 CATCCACCACCACGCCGT 62.698 66.667 0.00 0.00 0.00 5.68
70 71 4.388499 ATCCACCACCACGCCGTC 62.388 66.667 0.00 0.00 0.00 4.79
83 84 2.887568 CCGTCGTGCTGCTGGATC 60.888 66.667 0.00 0.00 0.00 3.36
84 85 2.182791 CGTCGTGCTGCTGGATCT 59.817 61.111 0.00 0.00 0.00 2.75
85 86 1.875813 CGTCGTGCTGCTGGATCTC 60.876 63.158 0.00 0.00 0.00 2.75
86 87 1.520342 GTCGTGCTGCTGGATCTCC 60.520 63.158 0.00 0.00 0.00 3.71
87 88 1.984026 TCGTGCTGCTGGATCTCCA 60.984 57.895 0.00 0.00 45.30 3.86
88 89 1.145598 CGTGCTGCTGGATCTCCAT 59.854 57.895 0.00 0.00 46.46 3.41
89 90 0.879400 CGTGCTGCTGGATCTCCATC 60.879 60.000 0.00 0.00 46.46 3.51
90 91 0.179702 GTGCTGCTGGATCTCCATCA 59.820 55.000 0.00 0.85 46.46 3.07
91 92 0.913924 TGCTGCTGGATCTCCATCAA 59.086 50.000 0.00 0.00 46.46 2.57
92 93 1.307097 GCTGCTGGATCTCCATCAAC 58.693 55.000 0.00 0.00 46.46 3.18
93 94 1.964552 CTGCTGGATCTCCATCAACC 58.035 55.000 0.00 0.00 46.46 3.77
94 95 1.489649 CTGCTGGATCTCCATCAACCT 59.510 52.381 0.00 0.00 46.46 3.50
95 96 1.487976 TGCTGGATCTCCATCAACCTC 59.512 52.381 0.00 0.00 46.46 3.85
96 97 1.767681 GCTGGATCTCCATCAACCTCT 59.232 52.381 0.00 0.00 46.46 3.69
97 98 2.224257 GCTGGATCTCCATCAACCTCTC 60.224 54.545 0.00 0.00 46.46 3.20
98 99 2.368221 CTGGATCTCCATCAACCTCTCC 59.632 54.545 0.00 0.00 46.46 3.71
99 100 2.022625 TGGATCTCCATCAACCTCTCCT 60.023 50.000 0.00 0.00 42.01 3.69
100 101 3.044894 GGATCTCCATCAACCTCTCCTT 58.955 50.000 0.00 0.00 35.64 3.36
101 102 3.070878 GGATCTCCATCAACCTCTCCTTC 59.929 52.174 0.00 0.00 35.64 3.46
102 103 2.472029 TCTCCATCAACCTCTCCTTCC 58.528 52.381 0.00 0.00 0.00 3.46
103 104 1.488393 CTCCATCAACCTCTCCTTCCC 59.512 57.143 0.00 0.00 0.00 3.97
104 105 0.548510 CCATCAACCTCTCCTTCCCC 59.451 60.000 0.00 0.00 0.00 4.81
105 106 0.548510 CATCAACCTCTCCTTCCCCC 59.451 60.000 0.00 0.00 0.00 5.40
106 107 0.423544 ATCAACCTCTCCTTCCCCCT 59.576 55.000 0.00 0.00 0.00 4.79
107 108 0.196118 TCAACCTCTCCTTCCCCCTT 59.804 55.000 0.00 0.00 0.00 3.95
108 109 0.329596 CAACCTCTCCTTCCCCCTTG 59.670 60.000 0.00 0.00 0.00 3.61
109 110 1.501654 AACCTCTCCTTCCCCCTTGC 61.502 60.000 0.00 0.00 0.00 4.01
110 111 1.617839 CCTCTCCTTCCCCCTTGCT 60.618 63.158 0.00 0.00 0.00 3.91
111 112 1.606531 CTCTCCTTCCCCCTTGCTG 59.393 63.158 0.00 0.00 0.00 4.41
112 113 1.919600 CTCTCCTTCCCCCTTGCTGG 61.920 65.000 0.00 0.00 0.00 4.85
113 114 1.925455 CTCCTTCCCCCTTGCTGGA 60.925 63.158 0.00 0.00 38.35 3.86
114 115 1.230281 TCCTTCCCCCTTGCTGGAT 60.230 57.895 0.00 0.00 38.35 3.41
115 116 1.228510 CCTTCCCCCTTGCTGGATC 59.771 63.158 0.00 0.00 38.35 3.36
116 117 1.574526 CCTTCCCCCTTGCTGGATCA 61.575 60.000 0.00 0.00 38.35 2.92
117 118 0.332632 CTTCCCCCTTGCTGGATCAA 59.667 55.000 0.00 0.00 38.35 2.57
118 119 0.332632 TTCCCCCTTGCTGGATCAAG 59.667 55.000 0.00 0.00 42.23 3.02
119 120 0.549902 TCCCCCTTGCTGGATCAAGA 60.550 55.000 0.00 0.00 44.61 3.02
120 121 0.332632 CCCCCTTGCTGGATCAAGAA 59.667 55.000 0.00 0.00 44.61 2.52
121 122 1.684248 CCCCCTTGCTGGATCAAGAAG 60.684 57.143 0.00 2.15 44.61 2.85
122 123 1.684248 CCCCTTGCTGGATCAAGAAGG 60.684 57.143 16.02 16.02 44.61 3.46
123 124 1.283029 CCCTTGCTGGATCAAGAAGGA 59.717 52.381 21.16 3.00 44.61 3.36
124 125 2.641305 CCTTGCTGGATCAAGAAGGAG 58.359 52.381 17.24 0.00 44.61 3.69
125 126 2.641305 CTTGCTGGATCAAGAAGGAGG 58.359 52.381 0.00 0.00 44.61 4.30
126 127 1.956869 TGCTGGATCAAGAAGGAGGA 58.043 50.000 0.00 0.00 0.00 3.71
127 128 1.836166 TGCTGGATCAAGAAGGAGGAG 59.164 52.381 0.00 0.00 0.00 3.69
128 129 2.114616 GCTGGATCAAGAAGGAGGAGA 58.885 52.381 0.00 0.00 0.00 3.71
129 130 2.158971 GCTGGATCAAGAAGGAGGAGAC 60.159 54.545 0.00 0.00 0.00 3.36
130 131 2.100584 CTGGATCAAGAAGGAGGAGACG 59.899 54.545 0.00 0.00 0.00 4.18
131 132 2.104170 GGATCAAGAAGGAGGAGACGT 58.896 52.381 0.00 0.00 0.00 4.34
132 133 2.100087 GGATCAAGAAGGAGGAGACGTC 59.900 54.545 7.70 7.70 0.00 4.34
133 134 1.166129 TCAAGAAGGAGGAGACGTCG 58.834 55.000 10.46 0.00 0.00 5.12
134 135 0.456995 CAAGAAGGAGGAGACGTCGC 60.457 60.000 11.19 11.19 0.00 5.19
135 136 0.609681 AAGAAGGAGGAGACGTCGCT 60.610 55.000 18.88 5.17 0.00 4.93
136 137 1.137825 GAAGGAGGAGACGTCGCTG 59.862 63.158 18.88 0.00 0.00 5.18
137 138 2.875684 GAAGGAGGAGACGTCGCTGC 62.876 65.000 18.88 10.73 0.00 5.25
138 139 3.749064 GGAGGAGACGTCGCTGCA 61.749 66.667 18.88 0.00 0.00 4.41
139 140 2.505118 GAGGAGACGTCGCTGCAC 60.505 66.667 18.88 2.25 0.00 4.57
140 141 3.973267 GAGGAGACGTCGCTGCACC 62.973 68.421 18.88 11.82 0.00 5.01
151 152 3.572539 CTGCACCGCACGTGTGTT 61.573 61.111 26.10 11.20 44.97 3.32
152 153 3.788586 CTGCACCGCACGTGTGTTG 62.789 63.158 26.10 23.47 44.97 3.33
153 154 3.568743 GCACCGCACGTGTGTTGA 61.569 61.111 27.91 0.00 44.97 3.18
154 155 3.094154 CACCGCACGTGTGTTGAA 58.906 55.556 26.10 0.00 37.73 2.69
155 156 1.297304 CACCGCACGTGTGTTGAAC 60.297 57.895 26.10 2.71 37.73 3.18
156 157 2.053465 CCGCACGTGTGTTGAACG 60.053 61.111 26.10 14.44 46.32 3.95
157 158 2.717190 CGCACGTGTGTTGAACGC 60.717 61.111 20.82 1.20 44.80 4.84
162 163 2.935955 GTGTGTTGAACGCGGAGG 59.064 61.111 12.47 0.00 0.00 4.30
163 164 1.885850 GTGTGTTGAACGCGGAGGT 60.886 57.895 12.47 0.00 0.00 3.85
164 165 1.885388 TGTGTTGAACGCGGAGGTG 60.885 57.895 12.47 0.00 0.00 4.00
165 166 2.970324 TGTTGAACGCGGAGGTGC 60.970 61.111 12.47 0.00 0.00 5.01
166 167 3.723348 GTTGAACGCGGAGGTGCC 61.723 66.667 12.47 0.00 0.00 5.01
184 185 4.353437 GTCCGTTCGGCACTCGGT 62.353 66.667 6.35 0.00 43.94 4.69
185 186 4.047059 TCCGTTCGGCACTCGGTC 62.047 66.667 6.35 0.00 43.94 4.79
186 187 4.351938 CCGTTCGGCACTCGGTCA 62.352 66.667 0.00 0.00 39.51 4.02
187 188 2.126071 CGTTCGGCACTCGGTCAT 60.126 61.111 0.00 0.00 39.77 3.06
188 189 2.158959 CGTTCGGCACTCGGTCATC 61.159 63.158 0.00 0.00 39.77 2.92
189 190 2.158959 GTTCGGCACTCGGTCATCG 61.159 63.158 0.00 0.00 39.77 3.84
190 191 3.350909 TTCGGCACTCGGTCATCGG 62.351 63.158 0.00 0.00 39.77 4.18
191 192 4.129737 CGGCACTCGGTCATCGGT 62.130 66.667 0.00 0.00 39.77 4.69
192 193 2.509336 GGCACTCGGTCATCGGTG 60.509 66.667 0.00 0.00 40.48 4.94
193 194 2.571757 GCACTCGGTCATCGGTGA 59.428 61.111 0.00 0.00 40.18 4.02
194 195 1.141881 GCACTCGGTCATCGGTGAT 59.858 57.895 0.00 0.00 40.18 3.06
195 196 0.460284 GCACTCGGTCATCGGTGATT 60.460 55.000 0.00 0.00 40.18 2.57
196 197 2.007049 GCACTCGGTCATCGGTGATTT 61.007 52.381 0.00 0.00 40.18 2.17
197 198 1.660607 CACTCGGTCATCGGTGATTTG 59.339 52.381 0.00 0.00 40.18 2.32
198 199 1.548719 ACTCGGTCATCGGTGATTTGA 59.451 47.619 0.00 0.00 39.77 2.69
199 200 2.028476 ACTCGGTCATCGGTGATTTGAA 60.028 45.455 0.00 0.00 39.77 2.69
200 201 3.198068 CTCGGTCATCGGTGATTTGAAT 58.802 45.455 0.00 0.00 39.77 2.57
201 202 3.194861 TCGGTCATCGGTGATTTGAATC 58.805 45.455 0.00 0.00 39.77 2.52
202 203 2.935849 CGGTCATCGGTGATTTGAATCA 59.064 45.455 0.00 2.39 37.89 2.57
210 211 2.093306 TGATTTGAATCACGGCGAGT 57.907 45.000 16.62 0.00 40.32 4.18
211 212 3.239587 TGATTTGAATCACGGCGAGTA 57.760 42.857 16.62 0.00 40.32 2.59
212 213 2.927477 TGATTTGAATCACGGCGAGTAC 59.073 45.455 16.62 2.58 40.32 2.73
213 214 1.342555 TTTGAATCACGGCGAGTACG 58.657 50.000 16.62 0.00 42.93 3.67
214 215 0.522626 TTGAATCACGGCGAGTACGA 59.477 50.000 16.62 1.74 42.66 3.43
215 216 0.179181 TGAATCACGGCGAGTACGAC 60.179 55.000 16.62 0.00 45.02 4.34
216 217 0.098376 GAATCACGGCGAGTACGACT 59.902 55.000 16.62 0.00 46.46 4.18
217 218 0.098376 AATCACGGCGAGTACGACTC 59.902 55.000 16.62 0.00 46.46 3.36
218 219 1.712977 ATCACGGCGAGTACGACTCC 61.713 60.000 16.62 0.00 46.46 3.85
219 220 3.494336 ACGGCGAGTACGACTCCG 61.494 66.667 16.62 17.85 46.46 4.63
238 239 2.073056 CGTCATCCACGTTCATTGGAA 58.927 47.619 0.00 0.00 46.37 3.53
239 240 2.159707 CGTCATCCACGTTCATTGGAAC 60.160 50.000 0.00 0.00 46.37 3.62
257 258 2.331805 GCTTCCGCTCGCGATCTA 59.668 61.111 10.36 0.00 42.83 1.98
258 259 2.011881 GCTTCCGCTCGCGATCTAC 61.012 63.158 10.36 0.00 42.83 2.59
259 260 1.355563 CTTCCGCTCGCGATCTACA 59.644 57.895 10.36 0.00 42.83 2.74
260 261 0.248498 CTTCCGCTCGCGATCTACAA 60.248 55.000 10.36 0.00 42.83 2.41
261 262 0.248498 TTCCGCTCGCGATCTACAAG 60.248 55.000 10.36 0.00 42.83 3.16
262 263 1.658717 CCGCTCGCGATCTACAAGG 60.659 63.158 10.36 0.00 42.83 3.61
263 264 1.658717 CGCTCGCGATCTACAAGGG 60.659 63.158 10.36 0.00 42.83 3.95
264 265 1.437986 GCTCGCGATCTACAAGGGT 59.562 57.895 10.36 0.00 0.00 4.34
265 266 0.666913 GCTCGCGATCTACAAGGGTA 59.333 55.000 10.36 0.00 0.00 3.69
266 267 1.269998 GCTCGCGATCTACAAGGGTAT 59.730 52.381 10.36 0.00 0.00 2.73
267 268 2.922758 GCTCGCGATCTACAAGGGTATG 60.923 54.545 10.36 0.00 0.00 2.39
268 269 2.293677 CTCGCGATCTACAAGGGTATGT 59.706 50.000 10.36 0.00 37.32 2.29
269 270 3.479489 TCGCGATCTACAAGGGTATGTA 58.521 45.455 3.71 0.00 34.75 2.29
278 279 4.408182 ACAAGGGTATGTAGATGCACTC 57.592 45.455 0.00 0.00 25.83 3.51
279 280 3.134804 ACAAGGGTATGTAGATGCACTCC 59.865 47.826 0.00 0.00 25.83 3.85
280 281 3.336509 AGGGTATGTAGATGCACTCCT 57.663 47.619 0.00 0.00 0.00 3.69
281 282 3.658725 AGGGTATGTAGATGCACTCCTT 58.341 45.455 0.00 0.00 0.00 3.36
282 283 4.040755 AGGGTATGTAGATGCACTCCTTT 58.959 43.478 0.00 0.00 0.00 3.11
283 284 4.101741 AGGGTATGTAGATGCACTCCTTTC 59.898 45.833 0.00 0.00 0.00 2.62
284 285 4.381411 GGTATGTAGATGCACTCCTTTCC 58.619 47.826 0.00 0.00 0.00 3.13
285 286 3.567478 ATGTAGATGCACTCCTTTCCC 57.433 47.619 0.00 0.00 0.00 3.97
286 287 1.559682 TGTAGATGCACTCCTTTCCCC 59.440 52.381 0.00 0.00 0.00 4.81
287 288 1.840635 GTAGATGCACTCCTTTCCCCT 59.159 52.381 0.00 0.00 0.00 4.79
288 289 0.915364 AGATGCACTCCTTTCCCCTC 59.085 55.000 0.00 0.00 0.00 4.30
289 290 0.462759 GATGCACTCCTTTCCCCTCG 60.463 60.000 0.00 0.00 0.00 4.63
290 291 1.201429 ATGCACTCCTTTCCCCTCGT 61.201 55.000 0.00 0.00 0.00 4.18
291 292 1.375326 GCACTCCTTTCCCCTCGTT 59.625 57.895 0.00 0.00 0.00 3.85
292 293 0.955919 GCACTCCTTTCCCCTCGTTG 60.956 60.000 0.00 0.00 0.00 4.10
293 294 0.955919 CACTCCTTTCCCCTCGTTGC 60.956 60.000 0.00 0.00 0.00 4.17
294 295 1.128188 ACTCCTTTCCCCTCGTTGCT 61.128 55.000 0.00 0.00 0.00 3.91
295 296 0.902531 CTCCTTTCCCCTCGTTGCTA 59.097 55.000 0.00 0.00 0.00 3.49
296 297 0.902531 TCCTTTCCCCTCGTTGCTAG 59.097 55.000 0.00 0.00 0.00 3.42
297 298 0.613777 CCTTTCCCCTCGTTGCTAGT 59.386 55.000 0.00 0.00 0.00 2.57
298 299 1.829222 CCTTTCCCCTCGTTGCTAGTA 59.171 52.381 0.00 0.00 0.00 1.82
299 300 2.434702 CCTTTCCCCTCGTTGCTAGTAT 59.565 50.000 0.00 0.00 0.00 2.12
300 301 3.640029 CCTTTCCCCTCGTTGCTAGTATA 59.360 47.826 0.00 0.00 0.00 1.47
301 302 4.501058 CCTTTCCCCTCGTTGCTAGTATAC 60.501 50.000 0.00 0.00 0.00 1.47
302 303 3.589951 TCCCCTCGTTGCTAGTATACT 57.410 47.619 10.87 10.87 0.00 2.12
303 304 3.484407 TCCCCTCGTTGCTAGTATACTC 58.516 50.000 9.12 0.00 0.00 2.59
304 305 2.557490 CCCCTCGTTGCTAGTATACTCC 59.443 54.545 9.12 2.61 0.00 3.85
305 306 3.220110 CCCTCGTTGCTAGTATACTCCA 58.780 50.000 9.12 5.38 0.00 3.86
306 307 3.827302 CCCTCGTTGCTAGTATACTCCAT 59.173 47.826 9.12 0.00 0.00 3.41
307 308 5.008331 CCCTCGTTGCTAGTATACTCCATA 58.992 45.833 9.12 0.00 0.00 2.74
308 309 5.124138 CCCTCGTTGCTAGTATACTCCATAG 59.876 48.000 9.12 2.18 0.00 2.23
309 310 5.938710 CCTCGTTGCTAGTATACTCCATAGA 59.061 44.000 9.12 9.14 0.00 1.98
310 311 6.600032 CCTCGTTGCTAGTATACTCCATAGAT 59.400 42.308 9.12 0.00 0.00 1.98
311 312 7.379098 TCGTTGCTAGTATACTCCATAGATG 57.621 40.000 9.12 0.15 0.00 2.90
328 329 7.984002 CATAGATGGATCTTGATAAGCGTAG 57.016 40.000 0.00 0.00 38.32 3.51
329 330 5.398603 AGATGGATCTTGATAAGCGTAGG 57.601 43.478 0.00 0.00 31.97 3.18
330 331 5.080337 AGATGGATCTTGATAAGCGTAGGA 58.920 41.667 0.00 0.00 31.97 2.94
331 332 5.540337 AGATGGATCTTGATAAGCGTAGGAA 59.460 40.000 0.00 0.00 31.97 3.36
332 333 5.607939 TGGATCTTGATAAGCGTAGGAAA 57.392 39.130 0.00 0.00 0.00 3.13
333 334 5.984725 TGGATCTTGATAAGCGTAGGAAAA 58.015 37.500 0.00 0.00 0.00 2.29
334 335 6.591935 TGGATCTTGATAAGCGTAGGAAAAT 58.408 36.000 0.00 0.00 0.00 1.82
335 336 7.054124 TGGATCTTGATAAGCGTAGGAAAATT 58.946 34.615 0.00 0.00 0.00 1.82
336 337 7.556275 TGGATCTTGATAAGCGTAGGAAAATTT 59.444 33.333 0.00 0.00 0.00 1.82
337 338 8.406297 GGATCTTGATAAGCGTAGGAAAATTTT 58.594 33.333 2.28 2.28 0.00 1.82
347 348 8.239681 AGCGTAGGAAAATTTTAAAATTCTGC 57.760 30.769 22.96 16.37 37.62 4.26
348 349 8.088365 AGCGTAGGAAAATTTTAAAATTCTGCT 58.912 29.630 22.96 21.59 37.62 4.24
349 350 9.349145 GCGTAGGAAAATTTTAAAATTCTGCTA 57.651 29.630 22.96 20.70 37.62 3.49
356 357 8.926715 AAATTTTAAAATTCTGCTACGATCCC 57.073 30.769 22.96 0.00 37.62 3.85
357 358 6.445357 TTTTAAAATTCTGCTACGATCCCC 57.555 37.500 0.00 0.00 0.00 4.81
358 359 3.644966 AAAATTCTGCTACGATCCCCA 57.355 42.857 0.00 0.00 0.00 4.96
359 360 3.644966 AAATTCTGCTACGATCCCCAA 57.355 42.857 0.00 0.00 0.00 4.12
360 361 2.622064 ATTCTGCTACGATCCCCAAC 57.378 50.000 0.00 0.00 0.00 3.77
361 362 1.271856 TTCTGCTACGATCCCCAACA 58.728 50.000 0.00 0.00 0.00 3.33
362 363 0.824109 TCTGCTACGATCCCCAACAG 59.176 55.000 0.00 0.00 0.00 3.16
363 364 0.179073 CTGCTACGATCCCCAACAGG 60.179 60.000 0.00 0.00 0.00 4.00
364 365 1.523938 GCTACGATCCCCAACAGGC 60.524 63.158 0.00 0.00 0.00 4.85
365 366 1.146263 CTACGATCCCCAACAGGCC 59.854 63.158 0.00 0.00 0.00 5.19
366 367 2.325393 CTACGATCCCCAACAGGCCC 62.325 65.000 0.00 0.00 0.00 5.80
367 368 4.506255 CGATCCCCAACAGGCCCC 62.506 72.222 0.00 0.00 0.00 5.80
368 369 4.506255 GATCCCCAACAGGCCCCG 62.506 72.222 0.00 0.00 0.00 5.73
386 387 2.739287 CCGCACGGTCGGCTTAAA 60.739 61.111 0.00 0.00 43.18 1.52
387 388 2.319096 CCGCACGGTCGGCTTAAAA 61.319 57.895 0.00 0.00 43.18 1.52
388 389 1.570475 CGCACGGTCGGCTTAAAAA 59.430 52.632 0.00 0.00 0.00 1.94
422 423 4.849329 CTGACGCGTAGGCCGGTC 62.849 72.222 13.97 0.00 37.31 4.79
427 428 4.203076 GCGTAGGCCGGTCGTCAT 62.203 66.667 1.90 0.00 36.94 3.06
428 429 2.837883 GCGTAGGCCGGTCGTCATA 61.838 63.158 1.90 0.00 36.94 2.15
429 430 1.729276 CGTAGGCCGGTCGTCATAA 59.271 57.895 1.90 0.00 0.00 1.90
430 431 0.101040 CGTAGGCCGGTCGTCATAAA 59.899 55.000 1.90 0.00 0.00 1.40
431 432 1.269413 CGTAGGCCGGTCGTCATAAAT 60.269 52.381 1.90 0.00 0.00 1.40
432 433 2.800629 CGTAGGCCGGTCGTCATAAATT 60.801 50.000 1.90 0.00 0.00 1.82
433 434 3.550639 CGTAGGCCGGTCGTCATAAATTA 60.551 47.826 1.90 0.00 0.00 1.40
434 435 3.547054 AGGCCGGTCGTCATAAATTAA 57.453 42.857 1.90 0.00 0.00 1.40
435 436 3.463944 AGGCCGGTCGTCATAAATTAAG 58.536 45.455 1.90 0.00 0.00 1.85
436 437 2.032290 GGCCGGTCGTCATAAATTAAGC 60.032 50.000 1.90 0.00 0.00 3.09
437 438 2.870411 GCCGGTCGTCATAAATTAAGCT 59.130 45.455 1.90 0.00 0.00 3.74
438 439 3.303132 GCCGGTCGTCATAAATTAAGCTG 60.303 47.826 1.90 0.00 0.00 4.24
439 440 4.116961 CCGGTCGTCATAAATTAAGCTGA 58.883 43.478 0.00 0.00 0.00 4.26
440 441 4.025979 CCGGTCGTCATAAATTAAGCTGAC 60.026 45.833 0.00 0.00 35.72 3.51
441 442 4.025979 CGGTCGTCATAAATTAAGCTGACC 60.026 45.833 0.00 7.94 39.89 4.02
442 443 4.025979 GGTCGTCATAAATTAAGCTGACCG 60.026 45.833 0.00 0.00 35.66 4.79
443 444 3.554324 TCGTCATAAATTAAGCTGACCGC 59.446 43.478 0.00 0.00 35.66 5.68
444 445 3.601586 CGTCATAAATTAAGCTGACCGCG 60.602 47.826 0.00 0.00 45.59 6.46
445 446 3.308866 GTCATAAATTAAGCTGACCGCGT 59.691 43.478 4.92 0.00 45.59 6.01
446 447 3.308595 TCATAAATTAAGCTGACCGCGTG 59.691 43.478 4.92 0.00 45.59 5.34
447 448 0.802494 AAATTAAGCTGACCGCGTGG 59.198 50.000 14.93 14.93 45.59 4.94
448 449 0.036765 AATTAAGCTGACCGCGTGGA 60.037 50.000 24.59 0.00 45.59 4.02
449 450 0.739813 ATTAAGCTGACCGCGTGGAC 60.740 55.000 24.59 17.20 45.59 4.02
450 451 2.089887 TTAAGCTGACCGCGTGGACA 62.090 55.000 24.59 21.32 45.59 4.02
459 460 4.065281 GCGTGGACAGCGGGTAGT 62.065 66.667 0.00 0.00 0.00 2.73
460 461 2.654877 CGTGGACAGCGGGTAGTT 59.345 61.111 0.00 0.00 0.00 2.24
461 462 1.736645 CGTGGACAGCGGGTAGTTG 60.737 63.158 0.00 0.00 37.08 3.16
462 463 1.375523 GTGGACAGCGGGTAGTTGG 60.376 63.158 0.00 0.00 35.19 3.77
463 464 1.534476 TGGACAGCGGGTAGTTGGA 60.534 57.895 0.00 0.00 35.19 3.53
464 465 1.079336 GGACAGCGGGTAGTTGGAC 60.079 63.158 0.00 0.00 35.19 4.02
465 466 1.445582 GACAGCGGGTAGTTGGACG 60.446 63.158 0.00 0.00 35.19 4.79
466 467 2.125673 CAGCGGGTAGTTGGACGG 60.126 66.667 0.00 0.00 0.00 4.79
467 468 4.078516 AGCGGGTAGTTGGACGGC 62.079 66.667 0.00 0.00 0.00 5.68
469 470 4.807039 CGGGTAGTTGGACGGCCG 62.807 72.222 26.86 26.86 36.79 6.13
472 473 4.382320 GTAGTTGGACGGCCGCCA 62.382 66.667 29.62 29.62 36.79 5.69
473 474 3.395702 TAGTTGGACGGCCGCCAT 61.396 61.111 32.27 23.75 34.90 4.40
474 475 3.673956 TAGTTGGACGGCCGCCATG 62.674 63.158 32.27 7.55 34.90 3.66
502 503 4.213700 GCGGATAGCGAGAAGACG 57.786 61.111 0.00 0.00 35.41 4.18
522 523 3.913573 CGAAGCGTCCATTCGGCG 61.914 66.667 0.00 0.00 44.40 6.46
523 524 2.813908 GAAGCGTCCATTCGGCGT 60.814 61.111 6.85 0.00 35.21 5.68
524 525 2.799540 GAAGCGTCCATTCGGCGTC 61.800 63.158 6.85 0.00 35.21 5.19
525 526 4.814294 AGCGTCCATTCGGCGTCC 62.814 66.667 6.85 0.00 35.21 4.79
551 552 4.299756 GCATTTGGGGCGCAAATT 57.700 50.000 32.15 18.74 30.66 1.82
552 553 2.553962 GCATTTGGGGCGCAAATTT 58.446 47.368 32.15 16.65 30.66 1.82
553 554 0.168568 GCATTTGGGGCGCAAATTTG 59.831 50.000 32.15 25.80 30.66 2.32
554 555 0.803740 CATTTGGGGCGCAAATTTGG 59.196 50.000 32.15 20.80 30.66 3.28
555 556 0.322366 ATTTGGGGCGCAAATTTGGG 60.322 50.000 29.96 26.18 43.22 4.12
561 562 2.356793 CGCAAATTTGGGCCGCAA 60.357 55.556 20.60 0.00 34.31 4.85
562 563 1.958205 CGCAAATTTGGGCCGCAAA 60.958 52.632 20.60 18.05 34.31 3.68
563 564 1.297456 CGCAAATTTGGGCCGCAAAT 61.297 50.000 20.60 20.27 34.31 2.32
564 565 0.168568 GCAAATTTGGGCCGCAAATG 59.831 50.000 24.22 18.09 33.13 2.32
565 566 0.168568 CAAATTTGGGCCGCAAATGC 59.831 50.000 24.22 0.00 33.13 3.56
599 600 4.129737 CGCGGACGTGATCTGGGT 62.130 66.667 0.00 0.00 40.88 4.51
600 601 2.264794 GCGGACGTGATCTGGGTT 59.735 61.111 0.00 0.00 33.81 4.11
601 602 1.375523 GCGGACGTGATCTGGGTTT 60.376 57.895 0.00 0.00 33.81 3.27
602 603 1.635663 GCGGACGTGATCTGGGTTTG 61.636 60.000 0.00 0.00 33.81 2.93
603 604 1.019278 CGGACGTGATCTGGGTTTGG 61.019 60.000 0.00 0.00 0.00 3.28
604 605 0.676782 GGACGTGATCTGGGTTTGGG 60.677 60.000 0.00 0.00 0.00 4.12
605 606 0.036306 GACGTGATCTGGGTTTGGGT 59.964 55.000 0.00 0.00 0.00 4.51
606 607 0.036306 ACGTGATCTGGGTTTGGGTC 59.964 55.000 0.00 0.00 0.00 4.46
607 608 1.019278 CGTGATCTGGGTTTGGGTCG 61.019 60.000 0.00 0.00 0.00 4.79
608 609 0.676782 GTGATCTGGGTTTGGGTCGG 60.677 60.000 0.00 0.00 0.00 4.79
609 610 1.749258 GATCTGGGTTTGGGTCGGC 60.749 63.158 0.00 0.00 0.00 5.54
610 611 3.622060 ATCTGGGTTTGGGTCGGCG 62.622 63.158 0.00 0.00 0.00 6.46
615 616 4.676586 GTTTGGGTCGGCGCGTTG 62.677 66.667 8.43 0.00 0.00 4.10
628 629 3.601685 CGTTGGGCCGCCACTTTT 61.602 61.111 12.58 0.00 0.00 2.27
629 630 2.262303 CGTTGGGCCGCCACTTTTA 61.262 57.895 12.58 0.00 0.00 1.52
630 631 1.591504 CGTTGGGCCGCCACTTTTAT 61.592 55.000 12.58 0.00 0.00 1.40
631 632 0.172578 GTTGGGCCGCCACTTTTATC 59.827 55.000 12.58 0.00 0.00 1.75
632 633 0.968393 TTGGGCCGCCACTTTTATCC 60.968 55.000 12.58 0.00 0.00 2.59
633 634 2.478033 GGGCCGCCACTTTTATCCG 61.478 63.158 12.58 0.00 0.00 4.18
634 635 2.407616 GCCGCCACTTTTATCCGC 59.592 61.111 0.00 0.00 0.00 5.54
635 636 2.707039 CCGCCACTTTTATCCGCG 59.293 61.111 0.00 0.00 42.37 6.46
636 637 2.022762 CGCCACTTTTATCCGCGC 59.977 61.111 0.00 0.00 36.02 6.86
637 638 2.407616 GCCACTTTTATCCGCGCC 59.592 61.111 0.00 0.00 0.00 6.53
638 639 2.707039 CCACTTTTATCCGCGCCG 59.293 61.111 0.00 0.00 0.00 6.46
639 640 1.812093 CCACTTTTATCCGCGCCGA 60.812 57.895 0.00 0.00 0.00 5.54
640 641 1.347221 CACTTTTATCCGCGCCGAC 59.653 57.895 0.00 0.00 0.00 4.79
641 642 1.812507 ACTTTTATCCGCGCCGACC 60.813 57.895 0.00 0.00 0.00 4.79
642 643 2.512057 TTTTATCCGCGCCGACCC 60.512 61.111 0.00 0.00 0.00 4.46
643 644 3.312285 TTTTATCCGCGCCGACCCA 62.312 57.895 0.00 0.00 0.00 4.51
644 645 2.799814 TTTTATCCGCGCCGACCCAA 62.800 55.000 0.00 0.00 0.00 4.12
645 646 2.799814 TTTATCCGCGCCGACCCAAA 62.800 55.000 0.00 0.00 0.00 3.28
650 651 3.723348 GCGCCGACCCAAACAGAC 61.723 66.667 0.00 0.00 0.00 3.51
651 652 3.411351 CGCCGACCCAAACAGACG 61.411 66.667 0.00 0.00 0.00 4.18
652 653 3.723348 GCCGACCCAAACAGACGC 61.723 66.667 0.00 0.00 0.00 5.19
653 654 2.280524 CCGACCCAAACAGACGCA 60.281 61.111 0.00 0.00 0.00 5.24
654 655 2.317609 CCGACCCAAACAGACGCAG 61.318 63.158 0.00 0.00 0.00 5.18
655 656 2.317609 CGACCCAAACAGACGCAGG 61.318 63.158 0.00 0.00 0.00 4.85
656 657 2.594592 ACCCAAACAGACGCAGGC 60.595 61.111 0.00 0.00 0.00 4.85
657 658 3.726517 CCCAAACAGACGCAGGCG 61.727 66.667 12.71 12.71 46.03 5.52
658 659 3.726517 CCAAACAGACGCAGGCGG 61.727 66.667 18.63 2.73 44.69 6.13
659 660 2.664851 CAAACAGACGCAGGCGGA 60.665 61.111 18.63 0.00 44.69 5.54
660 661 2.665185 AAACAGACGCAGGCGGAC 60.665 61.111 18.63 11.28 44.69 4.79
663 664 4.717629 CAGACGCAGGCGGACGAA 62.718 66.667 18.63 0.00 44.69 3.85
664 665 3.986006 AGACGCAGGCGGACGAAA 61.986 61.111 18.63 0.00 44.69 3.46
665 666 2.813908 GACGCAGGCGGACGAAAT 60.814 61.111 18.63 0.00 44.69 2.17
666 667 3.083600 GACGCAGGCGGACGAAATG 62.084 63.158 18.63 0.00 44.69 2.32
667 668 3.864686 CGCAGGCGGACGAAATGG 61.865 66.667 5.63 0.00 35.56 3.16
668 669 3.508840 GCAGGCGGACGAAATGGG 61.509 66.667 0.00 0.00 0.00 4.00
669 670 2.046314 CAGGCGGACGAAATGGGT 60.046 61.111 0.00 0.00 0.00 4.51
670 671 2.106683 CAGGCGGACGAAATGGGTC 61.107 63.158 0.00 0.00 0.00 4.46
671 672 3.192922 GGCGGACGAAATGGGTCG 61.193 66.667 0.00 0.00 46.54 4.79
672 673 3.192922 GCGGACGAAATGGGTCGG 61.193 66.667 0.00 0.00 45.40 4.79
684 685 2.434774 GGTCGGCCCTTTGGAGTT 59.565 61.111 0.00 0.00 0.00 3.01
685 686 1.971695 GGTCGGCCCTTTGGAGTTG 60.972 63.158 0.00 0.00 0.00 3.16
686 687 2.282180 TCGGCCCTTTGGAGTTGC 60.282 61.111 0.00 0.00 0.00 4.17
687 688 2.282462 CGGCCCTTTGGAGTTGCT 60.282 61.111 0.00 0.00 0.00 3.91
688 689 2.335712 CGGCCCTTTGGAGTTGCTC 61.336 63.158 0.00 0.00 0.00 4.26
718 719 7.935338 AATATTCTTTTTGTGTTCTGTGCAG 57.065 32.000 0.00 0.00 0.00 4.41
722 723 5.879237 TCTTTTTGTGTTCTGTGCAGTTAG 58.121 37.500 0.00 0.00 0.00 2.34
723 724 3.691049 TTTGTGTTCTGTGCAGTTAGC 57.309 42.857 0.00 0.00 45.96 3.09
741 742 3.637273 ACAAGGTCCAGCCGGTCC 61.637 66.667 1.90 0.00 43.70 4.46
769 774 2.747855 GAAGTGCCGGGCTTCCTG 60.748 66.667 21.46 0.00 37.08 3.86
793 799 1.668826 AGGTTTGAGGTATGGGCTCA 58.331 50.000 0.00 0.00 0.00 4.26
892 901 3.321497 CTCAGTTTCCCTCTCGTTTCTG 58.679 50.000 0.00 0.00 0.00 3.02
930 939 4.854587 AGGAAGCTCCTCTGACGT 57.145 55.556 0.00 0.00 45.66 4.34
932 941 1.465794 AGGAAGCTCCTCTGACGTAC 58.534 55.000 0.00 0.00 45.66 3.67
933 942 0.099082 GGAAGCTCCTCTGACGTACG 59.901 60.000 15.01 15.01 32.53 3.67
934 943 0.099082 GAAGCTCCTCTGACGTACGG 59.901 60.000 21.06 1.50 0.00 4.02
935 944 1.935327 AAGCTCCTCTGACGTACGGC 61.935 60.000 21.06 18.72 0.00 5.68
937 946 3.736482 CTCCTCTGACGTACGGCGC 62.736 68.421 21.06 0.00 46.11 6.53
939 948 3.812019 CTCTGACGTACGGCGCCT 61.812 66.667 26.68 14.27 46.11 5.52
958 967 4.598257 CCGTTAGGCCACTGACAG 57.402 61.111 5.01 0.00 33.11 3.51
959 968 1.079127 CCGTTAGGCCACTGACAGG 60.079 63.158 5.01 0.00 33.11 4.00
960 969 1.671742 CGTTAGGCCACTGACAGGT 59.328 57.895 5.01 0.00 33.11 4.00
961 970 0.670546 CGTTAGGCCACTGACAGGTG 60.671 60.000 5.01 2.99 33.11 4.00
969 978 2.847327 CACTGACAGGTGGATCAAGT 57.153 50.000 7.51 0.00 33.95 3.16
970 979 3.131709 CACTGACAGGTGGATCAAGTT 57.868 47.619 7.51 0.00 33.95 2.66
971 980 3.480470 CACTGACAGGTGGATCAAGTTT 58.520 45.455 7.51 0.00 33.95 2.66
972 981 3.499918 CACTGACAGGTGGATCAAGTTTC 59.500 47.826 7.51 0.00 33.95 2.78
973 982 3.136443 ACTGACAGGTGGATCAAGTTTCA 59.864 43.478 7.51 0.00 0.00 2.69
974 983 3.743521 TGACAGGTGGATCAAGTTTCAG 58.256 45.455 0.00 0.00 0.00 3.02
975 984 3.136443 TGACAGGTGGATCAAGTTTCAGT 59.864 43.478 0.00 0.00 0.00 3.41
976 985 3.744660 ACAGGTGGATCAAGTTTCAGTC 58.255 45.455 0.00 0.00 0.00 3.51
977 986 2.738846 CAGGTGGATCAAGTTTCAGTCG 59.261 50.000 0.00 0.00 0.00 4.18
978 987 2.076863 GGTGGATCAAGTTTCAGTCGG 58.923 52.381 0.00 0.00 0.00 4.79
979 988 2.076863 GTGGATCAAGTTTCAGTCGGG 58.923 52.381 0.00 0.00 0.00 5.14
980 989 1.087501 GGATCAAGTTTCAGTCGGGC 58.912 55.000 0.00 0.00 0.00 6.13
981 990 1.087501 GATCAAGTTTCAGTCGGGCC 58.912 55.000 0.00 0.00 0.00 5.80
982 991 0.322546 ATCAAGTTTCAGTCGGGCCC 60.323 55.000 13.57 13.57 0.00 5.80
983 992 1.228124 CAAGTTTCAGTCGGGCCCA 60.228 57.895 24.92 6.15 0.00 5.36
984 993 0.609131 CAAGTTTCAGTCGGGCCCAT 60.609 55.000 24.92 3.43 0.00 4.00
985 994 0.609131 AAGTTTCAGTCGGGCCCATG 60.609 55.000 24.92 17.36 0.00 3.66
986 995 1.002624 GTTTCAGTCGGGCCCATGA 60.003 57.895 24.92 19.54 0.00 3.07
987 996 1.026718 GTTTCAGTCGGGCCCATGAG 61.027 60.000 24.92 8.91 0.00 2.90
988 997 1.488705 TTTCAGTCGGGCCCATGAGT 61.489 55.000 24.92 12.20 0.00 3.41
989 998 1.899437 TTCAGTCGGGCCCATGAGTC 61.899 60.000 24.92 2.74 0.00 3.36
990 999 2.284625 AGTCGGGCCCATGAGTCA 60.285 61.111 24.92 0.00 0.00 3.41
991 1000 2.187946 GTCGGGCCCATGAGTCAG 59.812 66.667 24.92 1.98 0.00 3.51
992 1001 3.785859 TCGGGCCCATGAGTCAGC 61.786 66.667 24.92 0.00 0.00 4.26
994 1003 3.785859 GGGCCCATGAGTCAGCGA 61.786 66.667 19.95 0.00 0.00 4.93
995 1004 2.512515 GGCCCATGAGTCAGCGAC 60.513 66.667 0.00 1.15 0.00 5.19
996 1005 2.887568 GCCCATGAGTCAGCGACG 60.888 66.667 0.00 0.00 37.67 5.12
997 1006 2.202797 CCCATGAGTCAGCGACGG 60.203 66.667 0.00 0.00 37.67 4.79
998 1007 2.710902 CCCATGAGTCAGCGACGGA 61.711 63.158 0.00 0.00 37.67 4.69
999 1008 1.215382 CCATGAGTCAGCGACGGAA 59.785 57.895 0.00 0.00 37.67 4.30
1000 1009 1.078759 CCATGAGTCAGCGACGGAAC 61.079 60.000 0.00 0.00 37.67 3.62
1029 1038 4.554036 GCACGGCAGGGGATCCTC 62.554 72.222 12.58 7.90 42.67 3.71
1030 1039 4.227134 CACGGCAGGGGATCCTCG 62.227 72.222 12.58 5.37 42.67 4.63
1031 1040 4.779733 ACGGCAGGGGATCCTCGT 62.780 66.667 12.58 11.06 42.67 4.18
1032 1041 3.917760 CGGCAGGGGATCCTCGTC 61.918 72.222 12.58 4.80 42.67 4.20
1033 1042 3.551407 GGCAGGGGATCCTCGTCC 61.551 72.222 12.58 10.58 42.67 4.79
1050 1059 2.317040 GTCCCCCACGAAGATAGATCA 58.683 52.381 0.00 0.00 0.00 2.92
1051 1060 2.698797 GTCCCCCACGAAGATAGATCAA 59.301 50.000 0.00 0.00 0.00 2.57
1052 1061 3.134081 GTCCCCCACGAAGATAGATCAAA 59.866 47.826 0.00 0.00 0.00 2.69
1053 1062 3.778075 TCCCCCACGAAGATAGATCAAAA 59.222 43.478 0.00 0.00 0.00 2.44
1054 1063 4.226394 TCCCCCACGAAGATAGATCAAAAA 59.774 41.667 0.00 0.00 0.00 1.94
1077 1086 5.924769 AATAAAATCGATTACCCTCCCCT 57.075 39.130 11.83 0.00 0.00 4.79
1078 1087 3.859061 AAAATCGATTACCCTCCCCTC 57.141 47.619 11.83 0.00 0.00 4.30
1079 1088 2.489528 AATCGATTACCCTCCCCTCA 57.510 50.000 9.39 0.00 0.00 3.86
1080 1089 2.016905 ATCGATTACCCTCCCCTCAG 57.983 55.000 0.00 0.00 0.00 3.35
1081 1090 0.759436 TCGATTACCCTCCCCTCAGC 60.759 60.000 0.00 0.00 0.00 4.26
1082 1091 1.759459 CGATTACCCTCCCCTCAGCC 61.759 65.000 0.00 0.00 0.00 4.85
1102 1111 0.739561 CCCCTCCTCGTCTCGTTTAG 59.260 60.000 0.00 0.00 0.00 1.85
1116 1125 1.535437 CGTTTAGGATTCCGAGGTCCG 60.535 57.143 0.00 0.00 39.54 4.79
1127 1136 2.685380 AGGTCCGGGGAGAAGCAG 60.685 66.667 0.00 0.00 0.00 4.24
1128 1137 3.787001 GGTCCGGGGAGAAGCAGG 61.787 72.222 0.00 0.00 0.00 4.85
1230 1251 5.470437 CGCTCTTCTTAGTTTCCCTTTTCTT 59.530 40.000 0.00 0.00 0.00 2.52
1243 1264 5.754782 TCCCTTTTCTTGCTAGATAATGCA 58.245 37.500 0.00 0.00 37.42 3.96
1244 1265 5.590259 TCCCTTTTCTTGCTAGATAATGCAC 59.410 40.000 0.00 0.00 39.05 4.57
1253 1274 3.430218 GCTAGATAATGCACCGCTACTTG 59.570 47.826 0.00 0.00 0.00 3.16
1254 1275 2.213499 AGATAATGCACCGCTACTTGC 58.787 47.619 0.00 0.00 39.33 4.01
1256 1277 2.107950 TAATGCACCGCTACTTGCTT 57.892 45.000 0.00 0.00 39.62 3.91
1257 1278 1.247567 AATGCACCGCTACTTGCTTT 58.752 45.000 0.00 0.00 39.62 3.51
1297 1576 2.985139 CGTACTTCTGGTTTCTCCGTTC 59.015 50.000 0.00 0.00 39.52 3.95
1335 1614 2.549633 CGATGCGCTTGGAGAAAAAT 57.450 45.000 9.73 0.00 0.00 1.82
1336 1615 2.867429 CGATGCGCTTGGAGAAAAATT 58.133 42.857 9.73 0.00 0.00 1.82
1338 1617 1.782044 TGCGCTTGGAGAAAAATTGC 58.218 45.000 9.73 0.00 0.00 3.56
1344 1623 4.236935 GCTTGGAGAAAAATTGCGATGAA 58.763 39.130 0.00 0.00 0.00 2.57
1379 1666 0.539051 GAGGAGTGTGATGGTCCTGG 59.461 60.000 0.00 0.00 41.00 4.45
1380 1667 0.178891 AGGAGTGTGATGGTCCTGGT 60.179 55.000 0.00 0.00 39.36 4.00
1381 1668 0.250513 GGAGTGTGATGGTCCTGGTC 59.749 60.000 0.00 0.00 0.00 4.02
1382 1669 0.250513 GAGTGTGATGGTCCTGGTCC 59.749 60.000 2.75 2.75 0.00 4.46
1383 1670 1.201429 AGTGTGATGGTCCTGGTCCC 61.201 60.000 7.53 3.07 0.00 4.46
1384 1671 2.290287 TGTGATGGTCCTGGTCCCG 61.290 63.158 7.53 0.00 0.00 5.14
1422 1709 4.101898 GGAAAGGAAGGGGAGAGATTAGTC 59.898 50.000 0.00 0.00 0.00 2.59
1423 1710 4.354208 AAGGAAGGGGAGAGATTAGTCA 57.646 45.455 0.00 0.00 0.00 3.41
1424 1711 4.567987 AGGAAGGGGAGAGATTAGTCAT 57.432 45.455 0.00 0.00 0.00 3.06
1425 1712 4.901927 AGGAAGGGGAGAGATTAGTCATT 58.098 43.478 0.00 0.00 0.00 2.57
1426 1713 6.044411 AGGAAGGGGAGAGATTAGTCATTA 57.956 41.667 0.00 0.00 0.00 1.90
1427 1714 6.081356 AGGAAGGGGAGAGATTAGTCATTAG 58.919 44.000 0.00 0.00 0.00 1.73
1428 1715 5.841783 GGAAGGGGAGAGATTAGTCATTAGT 59.158 44.000 0.00 0.00 0.00 2.24
1429 1716 6.239458 GGAAGGGGAGAGATTAGTCATTAGTG 60.239 46.154 0.00 0.00 0.00 2.74
1430 1717 6.031964 AGGGGAGAGATTAGTCATTAGTGA 57.968 41.667 0.00 0.00 0.00 3.41
1431 1718 6.444704 AGGGGAGAGATTAGTCATTAGTGAA 58.555 40.000 0.00 0.00 35.80 3.18
1449 1736 9.614792 ATTAGTGAAATGGTAATGTTCTACTCC 57.385 33.333 0.00 0.00 0.00 3.85
1450 1737 6.415573 AGTGAAATGGTAATGTTCTACTCCC 58.584 40.000 0.00 0.00 0.00 4.30
1451 1738 6.215636 AGTGAAATGGTAATGTTCTACTCCCT 59.784 38.462 0.00 0.00 0.00 4.20
1452 1739 6.539103 GTGAAATGGTAATGTTCTACTCCCTC 59.461 42.308 0.00 0.00 0.00 4.30
1453 1740 5.632034 AATGGTAATGTTCTACTCCCTCC 57.368 43.478 0.00 0.00 0.00 4.30
1454 1741 3.028850 TGGTAATGTTCTACTCCCTCCG 58.971 50.000 0.00 0.00 0.00 4.63
1455 1742 3.029570 GGTAATGTTCTACTCCCTCCGT 58.970 50.000 0.00 0.00 0.00 4.69
1456 1743 3.450096 GGTAATGTTCTACTCCCTCCGTT 59.550 47.826 0.00 0.00 0.00 4.44
1457 1744 3.889520 AATGTTCTACTCCCTCCGTTC 57.110 47.619 0.00 0.00 0.00 3.95
1458 1745 1.171308 TGTTCTACTCCCTCCGTTCG 58.829 55.000 0.00 0.00 0.00 3.95
1459 1746 0.455005 GTTCTACTCCCTCCGTTCGG 59.545 60.000 4.74 4.74 0.00 4.30
1460 1747 0.329261 TTCTACTCCCTCCGTTCGGA 59.671 55.000 13.34 13.34 0.00 4.55
1461 1748 0.329261 TCTACTCCCTCCGTTCGGAA 59.671 55.000 14.79 0.04 33.41 4.30
1462 1749 1.064166 TCTACTCCCTCCGTTCGGAAT 60.064 52.381 14.79 2.09 33.41 3.01
1463 1750 1.755380 CTACTCCCTCCGTTCGGAATT 59.245 52.381 14.79 0.00 33.41 2.17
1464 1751 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
1465 1752 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
1466 1753 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
1467 1754 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
1468 1755 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
1469 1756 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
1470 1757 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
1471 1758 3.368116 CCTCCGTTCGGAATTACTTGTCT 60.368 47.826 14.79 0.00 33.41 3.41
1472 1759 3.841643 TCCGTTCGGAATTACTTGTCTC 58.158 45.455 11.66 0.00 0.00 3.36
1473 1760 2.597305 CCGTTCGGAATTACTTGTCTCG 59.403 50.000 5.19 0.00 0.00 4.04
1474 1761 2.597305 CGTTCGGAATTACTTGTCTCGG 59.403 50.000 0.00 0.00 0.00 4.63
1475 1762 3.671433 CGTTCGGAATTACTTGTCTCGGA 60.671 47.826 0.00 0.00 0.00 4.55
1476 1763 4.240096 GTTCGGAATTACTTGTCTCGGAA 58.760 43.478 0.00 0.00 0.00 4.30
1477 1764 4.524316 TCGGAATTACTTGTCTCGGAAA 57.476 40.909 0.00 0.00 0.00 3.13
1478 1765 5.080969 TCGGAATTACTTGTCTCGGAAAT 57.919 39.130 0.00 0.00 0.00 2.17
1479 1766 4.868171 TCGGAATTACTTGTCTCGGAAATG 59.132 41.667 0.00 0.00 0.00 2.32
1480 1767 4.034048 CGGAATTACTTGTCTCGGAAATGG 59.966 45.833 0.00 0.00 0.00 3.16
1481 1768 5.183228 GGAATTACTTGTCTCGGAAATGGA 58.817 41.667 0.00 0.00 0.00 3.41
1482 1769 5.823045 GGAATTACTTGTCTCGGAAATGGAT 59.177 40.000 0.00 0.00 0.00 3.41
1483 1770 6.238484 GGAATTACTTGTCTCGGAAATGGATG 60.238 42.308 0.00 0.00 0.00 3.51
1484 1771 3.703001 ACTTGTCTCGGAAATGGATGT 57.297 42.857 0.00 0.00 0.00 3.06
1485 1772 4.819105 ACTTGTCTCGGAAATGGATGTA 57.181 40.909 0.00 0.00 0.00 2.29
1486 1773 5.359194 ACTTGTCTCGGAAATGGATGTAT 57.641 39.130 0.00 0.00 0.00 2.29
1487 1774 5.360591 ACTTGTCTCGGAAATGGATGTATC 58.639 41.667 0.00 0.00 0.00 2.24
1488 1775 5.129485 ACTTGTCTCGGAAATGGATGTATCT 59.871 40.000 0.00 0.00 0.00 1.98
1489 1776 6.323996 ACTTGTCTCGGAAATGGATGTATCTA 59.676 38.462 0.00 0.00 0.00 1.98
1490 1777 6.332735 TGTCTCGGAAATGGATGTATCTAG 57.667 41.667 0.00 0.00 0.00 2.43
1503 1790 4.750952 TGTATCTAGACGCTACAGCATC 57.249 45.455 0.00 0.00 42.21 3.91
1520 1807 1.737793 CATCCGGGTTGAAGCAAGTAC 59.262 52.381 0.00 0.00 0.00 2.73
1522 1809 1.001633 TCCGGGTTGAAGCAAGTACTC 59.998 52.381 0.00 0.00 0.00 2.59
1527 1814 3.305881 GGGTTGAAGCAAGTACTCGTAGT 60.306 47.826 0.00 0.00 0.00 2.73
1528 1815 4.082571 GGGTTGAAGCAAGTACTCGTAGTA 60.083 45.833 0.00 0.00 0.00 1.82
1539 1826 7.958567 GCAAGTACTCGTAGTAGATATCATGTC 59.041 40.741 5.32 0.00 30.12 3.06
1540 1827 9.210329 CAAGTACTCGTAGTAGATATCATGTCT 57.790 37.037 5.32 0.00 30.12 3.41
1581 1868 6.887545 TCCAAATATGTCTGTTTATTCCCGTT 59.112 34.615 0.00 0.00 0.00 4.44
1582 1869 7.394923 TCCAAATATGTCTGTTTATTCCCGTTT 59.605 33.333 0.00 0.00 0.00 3.60
1583 1870 7.487829 CCAAATATGTCTGTTTATTCCCGTTTG 59.512 37.037 0.00 0.00 0.00 2.93
1621 1908 2.419297 GGTAGCTGCTGTGCTCTGTAAT 60.419 50.000 13.43 0.00 42.97 1.89
1623 1910 2.898705 AGCTGCTGTGCTCTGTAATAC 58.101 47.619 0.00 0.00 39.34 1.89
1629 1916 5.410924 TGCTGTGCTCTGTAATACTGTAAG 58.589 41.667 0.00 0.00 42.29 2.34
1681 1968 3.370104 ACCTGTCTACTTCCCTCATGAG 58.630 50.000 16.24 16.24 0.00 2.90
1684 1971 3.366396 TGTCTACTTCCCTCATGAGTCC 58.634 50.000 21.11 0.00 0.00 3.85
1723 2010 1.532868 GCACTCCATATGCACCGATTC 59.467 52.381 0.00 0.00 42.88 2.52
1736 2023 3.002348 GCACCGATTCTATTAGTGTTGCC 59.998 47.826 0.00 0.00 0.00 4.52
1777 2066 1.299773 CGCCGCATTTGGTTTGTGT 60.300 52.632 0.00 0.00 0.00 3.72
1790 2110 2.032178 GGTTTGTGTCTGTCTGTTCAGC 59.968 50.000 0.00 0.00 35.63 4.26
1855 2463 0.526662 AGTTTACTCAGGCGACTCCG 59.473 55.000 0.00 0.00 40.21 4.63
1885 2493 1.135575 GGTTCTGCCTTTCTTGATGCG 60.136 52.381 0.00 0.00 0.00 4.73
1976 2584 2.584391 GCCCAGTGTTCTCGGGTCT 61.584 63.158 0.00 0.00 42.44 3.85
1977 2585 1.293498 CCCAGTGTTCTCGGGTCTG 59.707 63.158 0.00 0.00 35.03 3.51
1995 2603 0.396435 TGAAGCTGAAAAGGCTCCGA 59.604 50.000 0.00 0.00 39.30 4.55
2019 2627 1.663702 GGTGTGGGACGACTTCACG 60.664 63.158 0.00 0.00 39.31 4.35
2124 2732 2.203394 CACCAGGCCAAGTGCACT 60.203 61.111 15.25 15.25 43.89 4.40
2171 2779 1.228154 ACAAGCCCCCGTTCTTGTC 60.228 57.895 2.17 0.00 46.98 3.18
2173 2781 3.546714 AAGCCCCCGTTCTTGTCGG 62.547 63.158 0.00 0.00 46.49 4.79
2197 2805 2.614057 GGCCAACATAAATCCTCAGACG 59.386 50.000 0.00 0.00 0.00 4.18
2202 2810 2.093500 ACATAAATCCTCAGACGCAGCA 60.093 45.455 0.00 0.00 0.00 4.41
2236 2844 2.977808 AGGAGAAGTTTCCTGTCCTGA 58.022 47.619 5.98 0.00 45.84 3.86
2524 3135 8.631797 CATCGATACAGATCCATGATAGATTCT 58.368 37.037 0.00 0.00 33.75 2.40
2646 3257 4.787551 TGAAGGAGAAGTTGGCAAGTTTA 58.212 39.130 20.50 1.09 0.00 2.01
3129 3740 2.440980 GGCCACATCCCTTCAGCC 60.441 66.667 0.00 0.00 0.00 4.85
3247 3858 5.563592 TGGATGAGATGAACACTTGTCATT 58.436 37.500 0.00 0.00 0.00 2.57
3345 3962 7.309920 ACAAAACAGTTTCGAAAGAGCTAAAA 58.690 30.769 11.66 0.00 43.69 1.52
3346 3963 7.484959 ACAAAACAGTTTCGAAAGAGCTAAAAG 59.515 33.333 11.66 0.00 43.69 2.27
3693 4313 0.855349 GCACGCGTCCAATGATAGAG 59.145 55.000 9.86 0.00 0.00 2.43
3697 4317 1.789464 CGCGTCCAATGATAGAGCTTC 59.211 52.381 0.00 0.00 0.00 3.86
3835 4455 0.391661 ACCAGCCAGTACTGAATGCG 60.392 55.000 24.68 15.92 40.25 4.73
4228 4855 1.266718 TCAGACAATTTTGCGGCAGTC 59.733 47.619 1.67 6.99 0.00 3.51
4346 5034 5.360714 ACGCCATCTGATGATTTATTTTGGT 59.639 36.000 18.92 0.00 0.00 3.67
4387 5882 9.784531 ACTATTCCTTGTATACATTTCATCTGG 57.215 33.333 6.36 0.45 0.00 3.86
4519 6014 1.591327 GGTTTGTGCGCCAGTTTGG 60.591 57.895 4.18 0.00 41.55 3.28
4568 6063 7.605691 ACTTCTTCTGAAACTATGATTCACCAG 59.394 37.037 0.00 0.00 33.47 4.00
4757 6761 7.398024 AGAACACAAACTAGCCAAGATAAGAT 58.602 34.615 0.00 0.00 0.00 2.40
4889 7066 3.525199 AGATCCAGTAACCAAATGCTCCT 59.475 43.478 0.00 0.00 0.00 3.69
4942 7119 3.445518 GATCACGGCCATGGCTCGA 62.446 63.158 37.60 29.51 41.60 4.04
5102 8364 5.155278 TGTCCCAAATAACGTAGTGACAT 57.845 39.130 0.00 0.00 45.00 3.06
5205 8522 0.464013 ATCGTCTCGTCCCGATCACT 60.464 55.000 0.00 0.00 39.45 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.394488 TGCGAGAGGGAGAGGTGTAG 60.394 60.000 0.00 0.00 0.00 2.74
2 3 1.680651 CTGCGAGAGGGAGAGGTGT 60.681 63.158 0.00 0.00 35.87 4.16
3 4 0.967887 TTCTGCGAGAGGGAGAGGTG 60.968 60.000 0.00 0.00 44.48 4.00
4 5 0.682855 CTTCTGCGAGAGGGAGAGGT 60.683 60.000 0.00 0.00 44.48 3.85
5 6 2.015227 GCTTCTGCGAGAGGGAGAGG 62.015 65.000 0.00 0.00 44.48 3.69
6 7 1.037030 AGCTTCTGCGAGAGGGAGAG 61.037 60.000 0.00 0.00 44.48 3.20
7 8 0.613292 AAGCTTCTGCGAGAGGGAGA 60.613 55.000 0.00 0.00 45.42 3.71
8 9 0.459934 CAAGCTTCTGCGAGAGGGAG 60.460 60.000 0.00 0.00 45.42 4.30
9 10 1.593787 CAAGCTTCTGCGAGAGGGA 59.406 57.895 0.00 0.00 45.42 4.20
10 11 1.449246 CCAAGCTTCTGCGAGAGGG 60.449 63.158 0.00 0.00 45.42 4.30
11 12 2.105466 GCCAAGCTTCTGCGAGAGG 61.105 63.158 0.00 0.00 45.42 3.69
12 13 3.483959 GCCAAGCTTCTGCGAGAG 58.516 61.111 0.00 0.00 45.42 3.20
29 30 4.821589 GGTCTCGGCAGGGCTTCG 62.822 72.222 0.00 0.00 0.00 3.79
30 31 4.475135 GGGTCTCGGCAGGGCTTC 62.475 72.222 0.00 0.00 0.00 3.86
35 36 4.208686 GTAGCGGGTCTCGGCAGG 62.209 72.222 0.00 0.00 41.04 4.85
36 37 2.685387 GATGTAGCGGGTCTCGGCAG 62.685 65.000 0.00 0.00 41.04 4.85
37 38 2.758327 ATGTAGCGGGTCTCGGCA 60.758 61.111 0.00 0.00 41.04 5.69
38 39 2.027751 GATGTAGCGGGTCTCGGC 59.972 66.667 0.00 0.00 39.69 5.54
39 40 2.125326 TGGATGTAGCGGGTCTCGG 61.125 63.158 0.00 0.00 39.69 4.63
40 41 1.065928 GTGGATGTAGCGGGTCTCG 59.934 63.158 0.00 0.00 42.76 4.04
41 42 1.327690 TGGTGGATGTAGCGGGTCTC 61.328 60.000 0.00 0.00 0.00 3.36
42 43 1.305802 TGGTGGATGTAGCGGGTCT 60.306 57.895 0.00 0.00 0.00 3.85
43 44 1.153429 GTGGTGGATGTAGCGGGTC 60.153 63.158 0.00 0.00 0.00 4.46
44 45 2.666098 GGTGGTGGATGTAGCGGGT 61.666 63.158 0.00 0.00 0.00 5.28
45 46 2.189521 GGTGGTGGATGTAGCGGG 59.810 66.667 0.00 0.00 0.00 6.13
46 47 1.449601 GTGGTGGTGGATGTAGCGG 60.450 63.158 0.00 0.00 0.00 5.52
47 48 1.809619 CGTGGTGGTGGATGTAGCG 60.810 63.158 0.00 0.00 0.00 4.26
48 49 2.106683 GCGTGGTGGTGGATGTAGC 61.107 63.158 0.00 0.00 0.00 3.58
49 50 1.449601 GGCGTGGTGGTGGATGTAG 60.450 63.158 0.00 0.00 0.00 2.74
50 51 2.666207 GGCGTGGTGGTGGATGTA 59.334 61.111 0.00 0.00 0.00 2.29
51 52 4.697756 CGGCGTGGTGGTGGATGT 62.698 66.667 0.00 0.00 0.00 3.06
52 53 4.697756 ACGGCGTGGTGGTGGATG 62.698 66.667 13.76 0.00 0.00 3.51
53 54 4.388499 GACGGCGTGGTGGTGGAT 62.388 66.667 21.19 0.00 0.00 3.41
66 67 2.887568 GATCCAGCAGCACGACGG 60.888 66.667 0.00 0.00 0.00 4.79
67 68 1.875813 GAGATCCAGCAGCACGACG 60.876 63.158 0.00 0.00 0.00 5.12
68 69 1.520342 GGAGATCCAGCAGCACGAC 60.520 63.158 0.00 0.00 35.64 4.34
69 70 1.984026 TGGAGATCCAGCAGCACGA 60.984 57.895 0.00 0.00 42.01 4.35
70 71 2.580815 TGGAGATCCAGCAGCACG 59.419 61.111 0.00 0.00 42.01 5.34
79 80 2.688477 AGGAGAGGTTGATGGAGATCC 58.312 52.381 0.00 0.00 0.00 3.36
80 81 3.070878 GGAAGGAGAGGTTGATGGAGATC 59.929 52.174 0.00 0.00 0.00 2.75
81 82 3.044894 GGAAGGAGAGGTTGATGGAGAT 58.955 50.000 0.00 0.00 0.00 2.75
82 83 2.472029 GGAAGGAGAGGTTGATGGAGA 58.528 52.381 0.00 0.00 0.00 3.71
83 84 1.488393 GGGAAGGAGAGGTTGATGGAG 59.512 57.143 0.00 0.00 0.00 3.86
84 85 1.584724 GGGAAGGAGAGGTTGATGGA 58.415 55.000 0.00 0.00 0.00 3.41
85 86 0.548510 GGGGAAGGAGAGGTTGATGG 59.451 60.000 0.00 0.00 0.00 3.51
86 87 0.548510 GGGGGAAGGAGAGGTTGATG 59.451 60.000 0.00 0.00 0.00 3.07
87 88 0.423544 AGGGGGAAGGAGAGGTTGAT 59.576 55.000 0.00 0.00 0.00 2.57
88 89 0.196118 AAGGGGGAAGGAGAGGTTGA 59.804 55.000 0.00 0.00 0.00 3.18
89 90 0.329596 CAAGGGGGAAGGAGAGGTTG 59.670 60.000 0.00 0.00 0.00 3.77
90 91 1.501654 GCAAGGGGGAAGGAGAGGTT 61.502 60.000 0.00 0.00 0.00 3.50
91 92 1.925972 GCAAGGGGGAAGGAGAGGT 60.926 63.158 0.00 0.00 0.00 3.85
92 93 1.617839 AGCAAGGGGGAAGGAGAGG 60.618 63.158 0.00 0.00 0.00 3.69
93 94 1.606531 CAGCAAGGGGGAAGGAGAG 59.393 63.158 0.00 0.00 0.00 3.20
94 95 1.925455 CCAGCAAGGGGGAAGGAGA 60.925 63.158 0.00 0.00 0.00 3.71
95 96 1.284841 ATCCAGCAAGGGGGAAGGAG 61.285 60.000 0.00 0.00 36.62 3.69
96 97 1.230281 ATCCAGCAAGGGGGAAGGA 60.230 57.895 0.00 0.00 36.62 3.36
97 98 1.228510 GATCCAGCAAGGGGGAAGG 59.771 63.158 0.00 0.00 36.62 3.46
98 99 0.332632 TTGATCCAGCAAGGGGGAAG 59.667 55.000 0.00 0.00 36.62 3.46
99 100 0.332632 CTTGATCCAGCAAGGGGGAA 59.667 55.000 0.00 0.00 41.15 3.97
100 101 0.549902 TCTTGATCCAGCAAGGGGGA 60.550 55.000 4.79 0.00 44.14 4.81
101 102 0.332632 TTCTTGATCCAGCAAGGGGG 59.667 55.000 4.79 0.00 44.14 5.40
102 103 1.684248 CCTTCTTGATCCAGCAAGGGG 60.684 57.143 4.79 4.42 44.14 4.79
103 104 1.283029 TCCTTCTTGATCCAGCAAGGG 59.717 52.381 17.39 0.00 44.14 3.95
104 105 2.641305 CTCCTTCTTGATCCAGCAAGG 58.359 52.381 14.03 14.03 44.14 3.61
105 106 2.238144 TCCTCCTTCTTGATCCAGCAAG 59.762 50.000 0.00 0.00 45.10 4.01
106 107 2.238144 CTCCTCCTTCTTGATCCAGCAA 59.762 50.000 0.00 0.00 0.00 3.91
107 108 1.836166 CTCCTCCTTCTTGATCCAGCA 59.164 52.381 0.00 0.00 0.00 4.41
108 109 2.114616 TCTCCTCCTTCTTGATCCAGC 58.885 52.381 0.00 0.00 0.00 4.85
109 110 2.100584 CGTCTCCTCCTTCTTGATCCAG 59.899 54.545 0.00 0.00 0.00 3.86
110 111 2.103373 CGTCTCCTCCTTCTTGATCCA 58.897 52.381 0.00 0.00 0.00 3.41
111 112 2.100087 GACGTCTCCTCCTTCTTGATCC 59.900 54.545 8.70 0.00 0.00 3.36
112 113 2.223386 CGACGTCTCCTCCTTCTTGATC 60.223 54.545 14.70 0.00 0.00 2.92
113 114 1.746220 CGACGTCTCCTCCTTCTTGAT 59.254 52.381 14.70 0.00 0.00 2.57
114 115 1.166129 CGACGTCTCCTCCTTCTTGA 58.834 55.000 14.70 0.00 0.00 3.02
115 116 0.456995 GCGACGTCTCCTCCTTCTTG 60.457 60.000 14.70 0.00 0.00 3.02
116 117 0.609681 AGCGACGTCTCCTCCTTCTT 60.610 55.000 14.70 0.00 0.00 2.52
117 118 1.001887 AGCGACGTCTCCTCCTTCT 60.002 57.895 14.70 0.00 0.00 2.85
118 119 1.137825 CAGCGACGTCTCCTCCTTC 59.862 63.158 14.70 0.00 0.00 3.46
119 120 2.995872 GCAGCGACGTCTCCTCCTT 61.996 63.158 14.70 0.00 0.00 3.36
120 121 3.444805 GCAGCGACGTCTCCTCCT 61.445 66.667 14.70 0.00 0.00 3.69
121 122 3.749064 TGCAGCGACGTCTCCTCC 61.749 66.667 14.70 0.44 0.00 4.30
122 123 2.505118 GTGCAGCGACGTCTCCTC 60.505 66.667 14.70 0.83 0.00 3.71
123 124 4.057428 GGTGCAGCGACGTCTCCT 62.057 66.667 14.70 6.88 0.00 3.69
138 139 2.804759 CGTTCAACACACGTGCGGT 61.805 57.895 17.22 11.80 32.80 5.68
139 140 2.053465 CGTTCAACACACGTGCGG 60.053 61.111 17.22 11.07 32.80 5.69
140 141 2.717190 GCGTTCAACACACGTGCG 60.717 61.111 17.22 9.16 39.92 5.34
141 142 2.717190 CGCGTTCAACACACGTGC 60.717 61.111 17.22 0.00 40.88 5.34
142 143 2.053465 CCGCGTTCAACACACGTG 60.053 61.111 15.48 15.48 45.61 4.49
143 144 2.202770 TCCGCGTTCAACACACGT 60.203 55.556 4.92 0.00 39.92 4.49
144 145 2.544359 CTCCGCGTTCAACACACG 59.456 61.111 4.92 0.00 40.75 4.49
145 146 1.885850 ACCTCCGCGTTCAACACAC 60.886 57.895 4.92 0.00 0.00 3.82
146 147 1.885388 CACCTCCGCGTTCAACACA 60.885 57.895 4.92 0.00 0.00 3.72
147 148 2.935955 CACCTCCGCGTTCAACAC 59.064 61.111 4.92 0.00 0.00 3.32
148 149 2.970324 GCACCTCCGCGTTCAACA 60.970 61.111 4.92 0.00 0.00 3.33
149 150 3.723348 GGCACCTCCGCGTTCAAC 61.723 66.667 4.92 0.00 0.00 3.18
170 171 2.126071 ATGACCGAGTGCCGAACG 60.126 61.111 0.00 0.00 41.76 3.95
171 172 2.158959 CGATGACCGAGTGCCGAAC 61.159 63.158 0.00 0.00 41.76 3.95
172 173 2.180769 CGATGACCGAGTGCCGAA 59.819 61.111 0.00 0.00 41.76 4.30
173 174 3.822192 CCGATGACCGAGTGCCGA 61.822 66.667 0.00 0.00 41.76 5.54
174 175 4.129737 ACCGATGACCGAGTGCCG 62.130 66.667 0.00 0.00 41.76 5.69
175 176 2.298158 ATCACCGATGACCGAGTGCC 62.298 60.000 0.00 0.00 41.76 5.01
176 177 0.460284 AATCACCGATGACCGAGTGC 60.460 55.000 0.00 0.00 41.76 4.40
177 178 1.660607 CAAATCACCGATGACCGAGTG 59.339 52.381 0.00 0.00 41.76 3.51
178 179 1.548719 TCAAATCACCGATGACCGAGT 59.451 47.619 0.00 0.00 41.76 4.18
179 180 2.293677 TCAAATCACCGATGACCGAG 57.706 50.000 0.00 0.00 41.76 4.63
180 181 2.753055 TTCAAATCACCGATGACCGA 57.247 45.000 0.00 0.00 41.76 4.69
181 182 2.935849 TGATTCAAATCACCGATGACCG 59.064 45.455 1.30 0.00 40.32 4.79
191 192 2.093306 ACTCGCCGTGATTCAAATCA 57.907 45.000 1.30 1.30 42.78 2.57
192 193 2.034842 CGTACTCGCCGTGATTCAAATC 60.035 50.000 0.00 0.00 35.97 2.17
193 194 1.924524 CGTACTCGCCGTGATTCAAAT 59.075 47.619 0.00 0.00 0.00 2.32
194 195 1.068402 TCGTACTCGCCGTGATTCAAA 60.068 47.619 0.00 0.00 36.96 2.69
195 196 0.522626 TCGTACTCGCCGTGATTCAA 59.477 50.000 0.00 0.00 36.96 2.69
196 197 0.179181 GTCGTACTCGCCGTGATTCA 60.179 55.000 0.00 0.00 36.96 2.57
197 198 0.098376 AGTCGTACTCGCCGTGATTC 59.902 55.000 0.00 0.00 36.96 2.52
198 199 0.098376 GAGTCGTACTCGCCGTGATT 59.902 55.000 0.00 0.00 35.28 2.57
199 200 1.712977 GGAGTCGTACTCGCCGTGAT 61.713 60.000 8.33 0.00 45.96 3.06
200 201 2.393768 GGAGTCGTACTCGCCGTGA 61.394 63.158 8.33 0.00 45.96 4.35
201 202 2.099831 GGAGTCGTACTCGCCGTG 59.900 66.667 8.33 0.00 45.96 4.94
202 203 3.494336 CGGAGTCGTACTCGCCGT 61.494 66.667 16.94 0.00 45.96 5.68
219 220 3.471495 GTTCCAATGAACGTGGATGAC 57.529 47.619 0.00 0.00 44.62 3.06
241 242 0.248498 TTGTAGATCGCGAGCGGAAG 60.248 55.000 19.77 0.00 40.25 3.46
242 243 0.248498 CTTGTAGATCGCGAGCGGAA 60.248 55.000 19.77 11.67 40.25 4.30
243 244 1.355563 CTTGTAGATCGCGAGCGGA 59.644 57.895 19.77 8.43 40.25 5.54
244 245 1.658717 CCTTGTAGATCGCGAGCGG 60.659 63.158 19.77 9.89 40.25 5.52
245 246 1.658717 CCCTTGTAGATCGCGAGCG 60.659 63.158 19.77 11.64 41.35 5.03
246 247 0.666913 TACCCTTGTAGATCGCGAGC 59.333 55.000 18.21 18.21 0.00 5.03
247 248 2.293677 ACATACCCTTGTAGATCGCGAG 59.706 50.000 16.66 0.00 0.00 5.03
248 249 2.304092 ACATACCCTTGTAGATCGCGA 58.696 47.619 13.09 13.09 0.00 5.87
249 250 2.795175 ACATACCCTTGTAGATCGCG 57.205 50.000 0.00 0.00 0.00 5.87
255 256 5.509840 GGAGTGCATCTACATACCCTTGTAG 60.510 48.000 5.47 5.47 46.85 2.74
256 257 4.344102 GGAGTGCATCTACATACCCTTGTA 59.656 45.833 0.00 0.00 0.00 2.41
257 258 3.134804 GGAGTGCATCTACATACCCTTGT 59.865 47.826 0.00 0.00 0.00 3.16
258 259 3.389329 AGGAGTGCATCTACATACCCTTG 59.611 47.826 0.00 0.00 0.00 3.61
259 260 3.658725 AGGAGTGCATCTACATACCCTT 58.341 45.455 0.00 0.00 0.00 3.95
260 261 3.336509 AGGAGTGCATCTACATACCCT 57.663 47.619 0.00 0.00 0.00 4.34
261 262 4.381411 GAAAGGAGTGCATCTACATACCC 58.619 47.826 0.00 0.00 0.00 3.69
262 263 4.381411 GGAAAGGAGTGCATCTACATACC 58.619 47.826 0.00 0.00 0.00 2.73
263 264 4.381411 GGGAAAGGAGTGCATCTACATAC 58.619 47.826 0.00 0.00 0.00 2.39
264 265 3.391296 GGGGAAAGGAGTGCATCTACATA 59.609 47.826 0.00 0.00 0.00 2.29
265 266 2.173569 GGGGAAAGGAGTGCATCTACAT 59.826 50.000 0.00 0.00 0.00 2.29
266 267 1.559682 GGGGAAAGGAGTGCATCTACA 59.440 52.381 0.00 0.00 0.00 2.74
267 268 1.840635 AGGGGAAAGGAGTGCATCTAC 59.159 52.381 0.00 0.00 0.00 2.59
268 269 2.119495 GAGGGGAAAGGAGTGCATCTA 58.881 52.381 0.00 0.00 0.00 1.98
269 270 0.915364 GAGGGGAAAGGAGTGCATCT 59.085 55.000 0.00 0.00 0.00 2.90
270 271 0.462759 CGAGGGGAAAGGAGTGCATC 60.463 60.000 0.00 0.00 0.00 3.91
271 272 1.201429 ACGAGGGGAAAGGAGTGCAT 61.201 55.000 0.00 0.00 0.00 3.96
272 273 1.415672 AACGAGGGGAAAGGAGTGCA 61.416 55.000 0.00 0.00 0.00 4.57
273 274 0.955919 CAACGAGGGGAAAGGAGTGC 60.956 60.000 0.00 0.00 0.00 4.40
274 275 0.955919 GCAACGAGGGGAAAGGAGTG 60.956 60.000 0.00 0.00 0.00 3.51
275 276 1.128188 AGCAACGAGGGGAAAGGAGT 61.128 55.000 0.00 0.00 0.00 3.85
276 277 0.902531 TAGCAACGAGGGGAAAGGAG 59.097 55.000 0.00 0.00 0.00 3.69
277 278 0.902531 CTAGCAACGAGGGGAAAGGA 59.097 55.000 0.00 0.00 0.00 3.36
278 279 0.613777 ACTAGCAACGAGGGGAAAGG 59.386 55.000 0.00 0.00 0.00 3.11
279 280 3.821421 ATACTAGCAACGAGGGGAAAG 57.179 47.619 0.00 0.00 0.00 2.62
280 281 4.284178 AGTATACTAGCAACGAGGGGAAA 58.716 43.478 2.75 0.00 0.00 3.13
281 282 3.887716 GAGTATACTAGCAACGAGGGGAA 59.112 47.826 5.09 0.00 0.00 3.97
282 283 3.484407 GAGTATACTAGCAACGAGGGGA 58.516 50.000 5.09 0.00 0.00 4.81
283 284 2.557490 GGAGTATACTAGCAACGAGGGG 59.443 54.545 5.09 0.00 0.00 4.79
284 285 3.220110 TGGAGTATACTAGCAACGAGGG 58.780 50.000 5.09 0.00 0.00 4.30
285 286 5.938710 TCTATGGAGTATACTAGCAACGAGG 59.061 44.000 5.09 0.00 0.00 4.63
286 287 7.468441 CATCTATGGAGTATACTAGCAACGAG 58.532 42.308 5.09 0.00 0.00 4.18
287 288 7.379098 CATCTATGGAGTATACTAGCAACGA 57.621 40.000 5.09 0.00 0.00 3.85
304 305 6.977502 CCTACGCTTATCAAGATCCATCTATG 59.022 42.308 0.00 0.00 35.76 2.23
305 306 6.892456 TCCTACGCTTATCAAGATCCATCTAT 59.108 38.462 0.00 0.00 35.76 1.98
306 307 6.246163 TCCTACGCTTATCAAGATCCATCTA 58.754 40.000 0.00 0.00 35.76 1.98
307 308 5.080337 TCCTACGCTTATCAAGATCCATCT 58.920 41.667 0.00 0.00 39.22 2.90
308 309 5.392767 TCCTACGCTTATCAAGATCCATC 57.607 43.478 0.00 0.00 0.00 3.51
309 310 5.808366 TTCCTACGCTTATCAAGATCCAT 57.192 39.130 0.00 0.00 0.00 3.41
310 311 5.607939 TTTCCTACGCTTATCAAGATCCA 57.392 39.130 0.00 0.00 0.00 3.41
311 312 7.497925 AATTTTCCTACGCTTATCAAGATCC 57.502 36.000 0.00 0.00 0.00 3.36
321 322 8.708742 GCAGAATTTTAAAATTTTCCTACGCTT 58.291 29.630 23.44 1.79 38.64 4.68
322 323 8.088365 AGCAGAATTTTAAAATTTTCCTACGCT 58.912 29.630 23.44 18.56 38.64 5.07
323 324 8.239681 AGCAGAATTTTAAAATTTTCCTACGC 57.760 30.769 23.44 17.05 38.64 4.42
330 331 9.366216 GGGATCGTAGCAGAATTTTAAAATTTT 57.634 29.630 23.44 16.90 38.64 1.82
331 332 7.979537 GGGGATCGTAGCAGAATTTTAAAATTT 59.020 33.333 23.44 12.55 38.64 1.82
332 333 7.123547 TGGGGATCGTAGCAGAATTTTAAAATT 59.876 33.333 22.95 22.95 41.06 1.82
333 334 6.605594 TGGGGATCGTAGCAGAATTTTAAAAT 59.394 34.615 7.64 7.64 0.00 1.82
334 335 5.946972 TGGGGATCGTAGCAGAATTTTAAAA 59.053 36.000 2.51 2.51 0.00 1.52
335 336 5.502079 TGGGGATCGTAGCAGAATTTTAAA 58.498 37.500 0.00 0.00 0.00 1.52
336 337 5.105567 TGGGGATCGTAGCAGAATTTTAA 57.894 39.130 0.00 0.00 0.00 1.52
337 338 4.764050 TGGGGATCGTAGCAGAATTTTA 57.236 40.909 0.00 0.00 0.00 1.52
338 339 3.644966 TGGGGATCGTAGCAGAATTTT 57.355 42.857 0.00 0.00 0.00 1.82
339 340 3.279434 GTTGGGGATCGTAGCAGAATTT 58.721 45.455 0.00 0.00 0.00 1.82
340 341 2.238646 TGTTGGGGATCGTAGCAGAATT 59.761 45.455 0.00 0.00 0.00 2.17
341 342 1.837439 TGTTGGGGATCGTAGCAGAAT 59.163 47.619 0.00 0.00 0.00 2.40
342 343 1.207089 CTGTTGGGGATCGTAGCAGAA 59.793 52.381 0.00 0.00 0.00 3.02
343 344 0.824109 CTGTTGGGGATCGTAGCAGA 59.176 55.000 0.00 0.00 0.00 4.26
344 345 0.179073 CCTGTTGGGGATCGTAGCAG 60.179 60.000 0.00 0.00 0.00 4.24
345 346 1.904771 CCTGTTGGGGATCGTAGCA 59.095 57.895 0.00 0.00 0.00 3.49
346 347 1.523938 GCCTGTTGGGGATCGTAGC 60.524 63.158 0.00 0.00 35.12 3.58
347 348 1.146263 GGCCTGTTGGGGATCGTAG 59.854 63.158 0.00 0.00 35.12 3.51
348 349 2.372074 GGGCCTGTTGGGGATCGTA 61.372 63.158 0.84 0.00 35.12 3.43
349 350 3.728373 GGGCCTGTTGGGGATCGT 61.728 66.667 0.84 0.00 35.12 3.73
350 351 4.506255 GGGGCCTGTTGGGGATCG 62.506 72.222 0.84 0.00 35.12 3.69
351 352 4.506255 CGGGGCCTGTTGGGGATC 62.506 72.222 3.48 0.00 35.12 3.36
370 371 1.570475 TTTTTAAGCCGACCGTGCG 59.430 52.632 0.00 0.00 0.00 5.34
405 406 4.849329 GACCGGCCTACGCGTCAG 62.849 72.222 18.63 9.98 40.31 3.51
410 411 2.340453 TTATGACGACCGGCCTACGC 62.340 60.000 0.00 0.36 42.52 4.42
411 412 0.101040 TTTATGACGACCGGCCTACG 59.899 55.000 0.00 5.28 43.80 3.51
412 413 2.521105 ATTTATGACGACCGGCCTAC 57.479 50.000 0.00 0.00 0.00 3.18
413 414 4.624015 CTTAATTTATGACGACCGGCCTA 58.376 43.478 0.00 0.00 0.00 3.93
414 415 3.463944 CTTAATTTATGACGACCGGCCT 58.536 45.455 0.00 0.00 0.00 5.19
415 416 2.032290 GCTTAATTTATGACGACCGGCC 60.032 50.000 0.00 0.00 0.00 6.13
416 417 2.870411 AGCTTAATTTATGACGACCGGC 59.130 45.455 0.00 0.00 0.00 6.13
417 418 4.025979 GTCAGCTTAATTTATGACGACCGG 60.026 45.833 0.00 0.00 33.42 5.28
418 419 4.025979 GGTCAGCTTAATTTATGACGACCG 60.026 45.833 11.46 0.00 42.34 4.79
419 420 4.025979 CGGTCAGCTTAATTTATGACGACC 60.026 45.833 14.35 14.35 42.34 4.79
420 421 4.550255 GCGGTCAGCTTAATTTATGACGAC 60.550 45.833 0.00 0.00 42.34 4.34
421 422 3.554324 GCGGTCAGCTTAATTTATGACGA 59.446 43.478 0.00 0.00 42.34 4.20
422 423 3.601586 CGCGGTCAGCTTAATTTATGACG 60.602 47.826 0.00 0.00 45.59 4.35
423 424 3.308866 ACGCGGTCAGCTTAATTTATGAC 59.691 43.478 12.47 0.00 45.59 3.06
424 425 3.308595 CACGCGGTCAGCTTAATTTATGA 59.691 43.478 12.47 0.00 45.59 2.15
425 426 3.546020 CCACGCGGTCAGCTTAATTTATG 60.546 47.826 12.47 0.00 45.59 1.90
426 427 2.612212 CCACGCGGTCAGCTTAATTTAT 59.388 45.455 12.47 0.00 45.59 1.40
427 428 2.004017 CCACGCGGTCAGCTTAATTTA 58.996 47.619 12.47 0.00 45.59 1.40
428 429 0.802494 CCACGCGGTCAGCTTAATTT 59.198 50.000 12.47 0.00 45.59 1.82
429 430 0.036765 TCCACGCGGTCAGCTTAATT 60.037 50.000 12.47 0.00 45.59 1.40
430 431 0.739813 GTCCACGCGGTCAGCTTAAT 60.740 55.000 12.47 0.00 45.59 1.40
431 432 1.373748 GTCCACGCGGTCAGCTTAA 60.374 57.895 12.47 0.00 45.59 1.85
432 433 2.260434 GTCCACGCGGTCAGCTTA 59.740 61.111 12.47 0.00 45.59 3.09
433 434 3.865929 CTGTCCACGCGGTCAGCTT 62.866 63.158 12.47 0.00 40.77 3.74
434 435 4.363990 CTGTCCACGCGGTCAGCT 62.364 66.667 12.47 0.00 40.77 4.24
442 443 3.584868 AACTACCCGCTGTCCACGC 62.585 63.158 0.00 0.00 0.00 5.34
443 444 1.736645 CAACTACCCGCTGTCCACG 60.737 63.158 0.00 0.00 0.00 4.94
444 445 1.375523 CCAACTACCCGCTGTCCAC 60.376 63.158 0.00 0.00 0.00 4.02
445 446 1.534476 TCCAACTACCCGCTGTCCA 60.534 57.895 0.00 0.00 0.00 4.02
446 447 1.079336 GTCCAACTACCCGCTGTCC 60.079 63.158 0.00 0.00 0.00 4.02
447 448 1.445582 CGTCCAACTACCCGCTGTC 60.446 63.158 0.00 0.00 0.00 3.51
448 449 2.654877 CGTCCAACTACCCGCTGT 59.345 61.111 0.00 0.00 0.00 4.40
449 450 2.125673 CCGTCCAACTACCCGCTG 60.126 66.667 0.00 0.00 0.00 5.18
450 451 4.078516 GCCGTCCAACTACCCGCT 62.079 66.667 0.00 0.00 0.00 5.52
452 453 4.807039 CGGCCGTCCAACTACCCG 62.807 72.222 19.50 0.00 0.00 5.28
455 456 3.675619 ATGGCGGCCGTCCAACTAC 62.676 63.158 34.25 14.76 37.13 2.73
456 457 3.395702 ATGGCGGCCGTCCAACTA 61.396 61.111 34.25 16.48 37.13 2.24
482 483 2.731348 CTTCTCGCTATCCGCCGC 60.731 66.667 0.00 0.00 36.73 6.53
483 484 1.370657 GTCTTCTCGCTATCCGCCG 60.371 63.158 0.00 0.00 36.73 6.46
484 485 1.370657 CGTCTTCTCGCTATCCGCC 60.371 63.158 0.00 0.00 36.73 6.13
485 486 4.213700 CGTCTTCTCGCTATCCGC 57.786 61.111 0.00 0.00 36.73 5.54
493 494 3.891834 GCTTCGCGCGTCTTCTCG 61.892 66.667 30.98 11.83 0.00 4.04
504 505 4.223964 GCCGAATGGACGCTTCGC 62.224 66.667 0.00 0.00 43.08 4.70
505 506 3.913573 CGCCGAATGGACGCTTCG 61.914 66.667 0.00 0.00 43.82 3.79
506 507 2.799540 GACGCCGAATGGACGCTTC 61.800 63.158 0.00 0.00 38.01 3.86
507 508 2.813908 GACGCCGAATGGACGCTT 60.814 61.111 0.00 0.00 38.01 4.68
508 509 4.814294 GGACGCCGAATGGACGCT 62.814 66.667 0.00 0.00 38.01 5.07
537 538 1.072159 CCCAAATTTGCGCCCCAAA 59.928 52.632 12.92 0.00 46.64 3.28
538 539 2.746359 CCCAAATTTGCGCCCCAA 59.254 55.556 12.92 0.00 0.00 4.12
539 540 4.014108 GCCCAAATTTGCGCCCCA 62.014 61.111 15.50 0.00 0.00 4.96
540 541 4.776322 GGCCCAAATTTGCGCCCC 62.776 66.667 29.03 14.66 44.40 5.80
544 545 1.958205 TTTGCGGCCCAAATTTGCG 60.958 52.632 12.92 11.82 38.46 4.85
545 546 4.055654 TTTGCGGCCCAAATTTGC 57.944 50.000 12.92 2.19 38.46 3.68
582 583 3.642778 AACCCAGATCACGTCCGCG 62.643 63.158 0.00 0.00 44.93 6.46
583 584 1.375523 AAACCCAGATCACGTCCGC 60.376 57.895 0.00 0.00 0.00 5.54
584 585 1.019278 CCAAACCCAGATCACGTCCG 61.019 60.000 0.00 0.00 0.00 4.79
585 586 0.676782 CCCAAACCCAGATCACGTCC 60.677 60.000 0.00 0.00 0.00 4.79
586 587 0.036306 ACCCAAACCCAGATCACGTC 59.964 55.000 0.00 0.00 0.00 4.34
587 588 0.036306 GACCCAAACCCAGATCACGT 59.964 55.000 0.00 0.00 0.00 4.49
588 589 1.019278 CGACCCAAACCCAGATCACG 61.019 60.000 0.00 0.00 0.00 4.35
589 590 0.676782 CCGACCCAAACCCAGATCAC 60.677 60.000 0.00 0.00 0.00 3.06
590 591 1.682849 CCGACCCAAACCCAGATCA 59.317 57.895 0.00 0.00 0.00 2.92
591 592 1.749258 GCCGACCCAAACCCAGATC 60.749 63.158 0.00 0.00 0.00 2.75
592 593 2.355115 GCCGACCCAAACCCAGAT 59.645 61.111 0.00 0.00 0.00 2.90
593 594 4.323477 CGCCGACCCAAACCCAGA 62.323 66.667 0.00 0.00 0.00 3.86
598 599 4.676586 CAACGCGCCGACCCAAAC 62.677 66.667 5.73 0.00 0.00 2.93
611 612 1.591504 ATAAAAGTGGCGGCCCAACG 61.592 55.000 17.97 0.00 44.33 4.10
612 613 0.172578 GATAAAAGTGGCGGCCCAAC 59.827 55.000 17.97 9.12 44.33 3.77
613 614 0.968393 GGATAAAAGTGGCGGCCCAA 60.968 55.000 17.97 0.00 44.33 4.12
614 615 1.379309 GGATAAAAGTGGCGGCCCA 60.379 57.895 17.97 1.34 39.32 5.36
615 616 2.478033 CGGATAAAAGTGGCGGCCC 61.478 63.158 17.97 8.02 0.00 5.80
616 617 3.107447 CGGATAAAAGTGGCGGCC 58.893 61.111 13.32 13.32 0.00 6.13
617 618 2.407616 GCGGATAAAAGTGGCGGC 59.592 61.111 0.00 0.00 0.00 6.53
618 619 2.707039 CGCGGATAAAAGTGGCGG 59.293 61.111 0.00 0.00 42.86 6.13
620 621 2.407616 GGCGCGGATAAAAGTGGC 59.592 61.111 8.83 0.00 36.34 5.01
621 622 1.812093 TCGGCGCGGATAAAAGTGG 60.812 57.895 14.27 0.00 0.00 4.00
622 623 1.347221 GTCGGCGCGGATAAAAGTG 59.653 57.895 21.12 0.00 0.00 3.16
623 624 1.812507 GGTCGGCGCGGATAAAAGT 60.813 57.895 21.12 0.00 0.00 2.66
624 625 2.531376 GGGTCGGCGCGGATAAAAG 61.531 63.158 21.12 0.00 0.00 2.27
625 626 2.512057 GGGTCGGCGCGGATAAAA 60.512 61.111 21.12 0.00 0.00 1.52
626 627 2.799814 TTTGGGTCGGCGCGGATAAA 62.800 55.000 21.12 17.74 0.00 1.40
627 628 3.312285 TTTGGGTCGGCGCGGATAA 62.312 57.895 21.12 13.29 0.00 1.75
628 629 3.772281 TTTGGGTCGGCGCGGATA 61.772 61.111 21.12 8.05 0.00 2.59
633 634 3.723348 GTCTGTTTGGGTCGGCGC 61.723 66.667 0.00 0.00 0.00 6.53
634 635 3.411351 CGTCTGTTTGGGTCGGCG 61.411 66.667 0.00 0.00 0.00 6.46
635 636 3.723348 GCGTCTGTTTGGGTCGGC 61.723 66.667 0.00 0.00 0.00 5.54
636 637 2.280524 TGCGTCTGTTTGGGTCGG 60.281 61.111 0.00 0.00 0.00 4.79
637 638 2.317609 CCTGCGTCTGTTTGGGTCG 61.318 63.158 0.00 0.00 0.00 4.79
638 639 2.617274 GCCTGCGTCTGTTTGGGTC 61.617 63.158 0.00 0.00 0.00 4.46
639 640 2.594592 GCCTGCGTCTGTTTGGGT 60.595 61.111 0.00 0.00 0.00 4.51
640 641 3.726517 CGCCTGCGTCTGTTTGGG 61.727 66.667 2.83 0.00 34.35 4.12
641 642 3.726517 CCGCCTGCGTCTGTTTGG 61.727 66.667 10.94 0.00 37.81 3.28
642 643 2.664851 TCCGCCTGCGTCTGTTTG 60.665 61.111 10.94 0.00 37.81 2.93
643 644 2.665185 GTCCGCCTGCGTCTGTTT 60.665 61.111 10.94 0.00 37.81 2.83
646 647 4.717629 TTCGTCCGCCTGCGTCTG 62.718 66.667 10.94 0.00 37.81 3.51
647 648 3.296709 ATTTCGTCCGCCTGCGTCT 62.297 57.895 10.94 0.00 37.81 4.18
648 649 2.813908 ATTTCGTCCGCCTGCGTC 60.814 61.111 10.94 2.65 37.81 5.19
649 650 3.118454 CATTTCGTCCGCCTGCGT 61.118 61.111 10.94 0.00 37.81 5.24
650 651 3.864686 CCATTTCGTCCGCCTGCG 61.865 66.667 4.20 4.20 39.44 5.18
651 652 3.508840 CCCATTTCGTCCGCCTGC 61.509 66.667 0.00 0.00 0.00 4.85
652 653 2.046314 ACCCATTTCGTCCGCCTG 60.046 61.111 0.00 0.00 0.00 4.85
653 654 2.267961 GACCCATTTCGTCCGCCT 59.732 61.111 0.00 0.00 0.00 5.52
654 655 3.192922 CGACCCATTTCGTCCGCC 61.193 66.667 0.00 0.00 34.16 6.13
655 656 3.192922 CCGACCCATTTCGTCCGC 61.193 66.667 0.00 0.00 37.29 5.54
656 657 3.192922 GCCGACCCATTTCGTCCG 61.193 66.667 0.00 0.00 37.29 4.79
657 658 2.822701 GGCCGACCCATTTCGTCC 60.823 66.667 0.00 0.00 37.29 4.79
667 668 1.971695 CAACTCCAAAGGGCCGACC 60.972 63.158 0.00 0.00 40.67 4.79
668 669 2.626780 GCAACTCCAAAGGGCCGAC 61.627 63.158 0.00 0.00 0.00 4.79
669 670 2.282180 GCAACTCCAAAGGGCCGA 60.282 61.111 0.00 0.00 0.00 5.54
670 671 2.282462 AGCAACTCCAAAGGGCCG 60.282 61.111 0.00 0.00 0.00 6.13
671 672 0.328258 TAGAGCAACTCCAAAGGGCC 59.672 55.000 0.00 0.00 0.00 5.80
672 673 2.200373 TTAGAGCAACTCCAAAGGGC 57.800 50.000 0.00 0.00 0.00 5.19
701 702 4.420168 GCTAACTGCACAGAACACAAAAA 58.580 39.130 4.31 0.00 42.31 1.94
716 717 1.160137 GCTGGACCTTGTGCTAACTG 58.840 55.000 0.00 0.00 0.00 3.16
718 719 1.298859 CGGCTGGACCTTGTGCTAAC 61.299 60.000 0.00 0.00 35.61 2.34
722 723 4.643387 ACCGGCTGGACCTTGTGC 62.643 66.667 21.41 0.00 39.21 4.57
723 724 2.358737 GACCGGCTGGACCTTGTG 60.359 66.667 21.41 0.00 39.21 3.33
725 726 4.760047 CGGACCGGCTGGACCTTG 62.760 72.222 27.29 11.85 46.54 3.61
751 752 4.394712 AGGAAGCCCGGCACTTCG 62.395 66.667 22.07 0.00 43.65 3.79
755 756 3.056328 GAACAGGAAGCCCGGCAC 61.056 66.667 13.15 5.09 37.58 5.01
757 758 2.282180 TTGAACAGGAAGCCCGGC 60.282 61.111 0.00 0.00 37.58 6.13
758 759 3.987404 CTTGAACAGGAAGCCCGG 58.013 61.111 0.00 0.00 37.58 5.73
767 772 3.758554 CCCATACCTCAAACCTTGAACAG 59.241 47.826 0.00 0.00 39.58 3.16
769 774 2.492088 GCCCATACCTCAAACCTTGAAC 59.508 50.000 0.00 0.00 39.58 3.18
793 799 0.984230 TCTGGGCTCAAATTCCTCGT 59.016 50.000 0.00 0.00 0.00 4.18
828 834 0.965866 CCGCTTTTCCTTTCCTCCCC 60.966 60.000 0.00 0.00 0.00 4.81
830 836 1.883732 GCCGCTTTTCCTTTCCTCC 59.116 57.895 0.00 0.00 0.00 4.30
831 837 1.502190 CGCCGCTTTTCCTTTCCTC 59.498 57.895 0.00 0.00 0.00 3.71
832 838 1.971695 CCGCCGCTTTTCCTTTCCT 60.972 57.895 0.00 0.00 0.00 3.36
835 841 4.038080 CGCCGCCGCTTTTCCTTT 62.038 61.111 0.00 0.00 0.00 3.11
915 924 0.099082 CCGTACGTCAGAGGAGCTTC 59.901 60.000 15.21 0.00 0.00 3.86
916 925 1.935327 GCCGTACGTCAGAGGAGCTT 61.935 60.000 15.21 0.00 0.00 3.74
917 926 2.408241 GCCGTACGTCAGAGGAGCT 61.408 63.158 15.21 0.00 0.00 4.09
919 928 2.403987 CGCCGTACGTCAGAGGAG 59.596 66.667 15.21 0.00 36.87 3.69
941 950 1.079127 CCTGTCAGTGGCCTAACGG 60.079 63.158 3.32 1.71 0.00 4.44
942 951 0.670546 CACCTGTCAGTGGCCTAACG 60.671 60.000 3.32 0.00 33.95 3.18
943 952 3.233355 CACCTGTCAGTGGCCTAAC 57.767 57.895 3.32 0.00 33.95 2.34
950 959 2.847327 ACTTGATCCACCTGTCAGTG 57.153 50.000 0.00 0.00 37.51 3.66
951 960 3.136443 TGAAACTTGATCCACCTGTCAGT 59.864 43.478 0.00 0.00 0.00 3.41
952 961 3.743521 TGAAACTTGATCCACCTGTCAG 58.256 45.455 0.00 0.00 0.00 3.51
953 962 3.136443 ACTGAAACTTGATCCACCTGTCA 59.864 43.478 0.00 0.00 0.00 3.58
954 963 3.744660 ACTGAAACTTGATCCACCTGTC 58.255 45.455 0.00 0.00 0.00 3.51
955 964 3.744660 GACTGAAACTTGATCCACCTGT 58.255 45.455 0.00 0.00 0.00 4.00
956 965 2.738846 CGACTGAAACTTGATCCACCTG 59.261 50.000 0.00 0.00 0.00 4.00
957 966 2.289694 CCGACTGAAACTTGATCCACCT 60.290 50.000 0.00 0.00 0.00 4.00
958 967 2.076863 CCGACTGAAACTTGATCCACC 58.923 52.381 0.00 0.00 0.00 4.61
959 968 2.076863 CCCGACTGAAACTTGATCCAC 58.923 52.381 0.00 0.00 0.00 4.02
960 969 1.610624 GCCCGACTGAAACTTGATCCA 60.611 52.381 0.00 0.00 0.00 3.41
961 970 1.087501 GCCCGACTGAAACTTGATCC 58.912 55.000 0.00 0.00 0.00 3.36
962 971 1.087501 GGCCCGACTGAAACTTGATC 58.912 55.000 0.00 0.00 0.00 2.92
963 972 0.322546 GGGCCCGACTGAAACTTGAT 60.323 55.000 5.69 0.00 0.00 2.57
964 973 1.072505 GGGCCCGACTGAAACTTGA 59.927 57.895 5.69 0.00 0.00 3.02
965 974 0.609131 ATGGGCCCGACTGAAACTTG 60.609 55.000 19.37 0.00 0.00 3.16
966 975 0.609131 CATGGGCCCGACTGAAACTT 60.609 55.000 19.37 0.00 0.00 2.66
967 976 1.002134 CATGGGCCCGACTGAAACT 60.002 57.895 19.37 0.00 0.00 2.66
968 977 1.002624 TCATGGGCCCGACTGAAAC 60.003 57.895 19.37 0.00 0.00 2.78
969 978 1.299648 CTCATGGGCCCGACTGAAA 59.700 57.895 19.37 0.00 0.00 2.69
970 979 1.899437 GACTCATGGGCCCGACTGAA 61.899 60.000 19.37 0.00 0.00 3.02
971 980 2.284625 ACTCATGGGCCCGACTGA 60.285 61.111 19.37 18.36 0.00 3.41
972 981 2.187946 GACTCATGGGCCCGACTG 59.812 66.667 19.37 14.85 0.00 3.51
973 982 2.284625 TGACTCATGGGCCCGACT 60.285 61.111 19.37 0.33 0.00 4.18
974 983 2.187946 CTGACTCATGGGCCCGAC 59.812 66.667 19.37 3.37 0.00 4.79
975 984 3.785859 GCTGACTCATGGGCCCGA 61.786 66.667 19.37 8.43 0.00 5.14
977 986 3.785859 TCGCTGACTCATGGGCCC 61.786 66.667 17.59 17.59 0.00 5.80
978 987 2.512515 GTCGCTGACTCATGGGCC 60.513 66.667 0.00 0.00 0.00 5.80
979 988 2.887568 CGTCGCTGACTCATGGGC 60.888 66.667 0.00 0.00 0.00 5.36
980 989 2.202797 CCGTCGCTGACTCATGGG 60.203 66.667 0.00 0.00 0.00 4.00
981 990 1.078759 GTTCCGTCGCTGACTCATGG 61.079 60.000 0.00 2.01 0.00 3.66
982 991 1.406219 CGTTCCGTCGCTGACTCATG 61.406 60.000 7.03 0.00 0.00 3.07
983 992 1.154016 CGTTCCGTCGCTGACTCAT 60.154 57.895 7.03 0.00 0.00 2.90
984 993 2.254350 CGTTCCGTCGCTGACTCA 59.746 61.111 7.03 0.00 0.00 3.41
985 994 2.504244 CCGTTCCGTCGCTGACTC 60.504 66.667 7.03 0.00 0.00 3.36
986 995 4.719369 GCCGTTCCGTCGCTGACT 62.719 66.667 7.03 0.00 0.00 3.41
1012 1021 4.554036 GAGGATCCCCTGCCGTGC 62.554 72.222 8.55 0.00 44.53 5.34
1013 1022 4.227134 CGAGGATCCCCTGCCGTG 62.227 72.222 8.55 0.00 44.53 4.94
1014 1023 4.779733 ACGAGGATCCCCTGCCGT 62.780 66.667 8.55 7.95 44.53 5.68
1015 1024 3.917760 GACGAGGATCCCCTGCCG 61.918 72.222 8.55 7.30 44.53 5.69
1016 1025 3.551407 GGACGAGGATCCCCTGCC 61.551 72.222 8.55 1.52 44.53 4.85
1030 1039 2.317040 TGATCTATCTTCGTGGGGGAC 58.683 52.381 0.00 0.00 0.00 4.46
1031 1040 2.767644 TGATCTATCTTCGTGGGGGA 57.232 50.000 0.00 0.00 0.00 4.81
1032 1041 3.838244 TTTGATCTATCTTCGTGGGGG 57.162 47.619 0.00 0.00 0.00 5.40
1052 1061 7.130099 AGGGGAGGGTAATCGATTTTATTTTT 58.870 34.615 17.19 0.00 0.00 1.94
1053 1062 6.679542 AGGGGAGGGTAATCGATTTTATTTT 58.320 36.000 17.19 0.00 0.00 1.82
1054 1063 6.126303 TGAGGGGAGGGTAATCGATTTTATTT 60.126 38.462 17.19 0.00 0.00 1.40
1055 1064 5.371472 TGAGGGGAGGGTAATCGATTTTATT 59.629 40.000 17.19 0.25 0.00 1.40
1056 1065 4.911522 TGAGGGGAGGGTAATCGATTTTAT 59.088 41.667 17.19 0.14 0.00 1.40
1082 1091 0.682209 TAAACGAGACGAGGAGGGGG 60.682 60.000 0.00 0.00 0.00 5.40
1089 1098 2.353889 TCGGAATCCTAAACGAGACGAG 59.646 50.000 0.00 0.00 0.00 4.18
1143 1152 3.014036 GGATACGACGCGACGGTA 58.986 61.111 31.73 21.45 37.61 4.02
1182 1192 3.329889 TGCTCGCAATCCCAGGGT 61.330 61.111 5.01 0.00 0.00 4.34
1221 1242 5.221126 GGTGCATTATCTAGCAAGAAAAGGG 60.221 44.000 0.00 0.00 43.20 3.95
1230 1251 2.628178 AGTAGCGGTGCATTATCTAGCA 59.372 45.455 5.29 0.00 38.65 3.49
1256 1277 0.694196 ATCCGACGAAGGGGGAAAAA 59.306 50.000 0.00 0.00 36.62 1.94
1257 1278 0.251073 GATCCGACGAAGGGGGAAAA 59.749 55.000 0.00 0.00 36.62 2.29
1260 1281 2.269520 TACGATCCGACGAAGGGGGA 62.270 60.000 0.00 0.00 37.39 4.81
1297 1576 0.572590 GCATTCGACAGGAACGATCG 59.427 55.000 14.88 14.88 40.88 3.69
1323 1602 4.622740 GGTTCATCGCAATTTTTCTCCAAG 59.377 41.667 0.00 0.00 0.00 3.61
1329 1608 4.375908 CCAAACGGTTCATCGCAATTTTTC 60.376 41.667 0.00 0.00 0.00 2.29
1332 1611 2.035321 ACCAAACGGTTCATCGCAATTT 59.965 40.909 0.00 0.00 30.22 1.82
1333 1612 1.611491 ACCAAACGGTTCATCGCAATT 59.389 42.857 0.00 0.00 30.22 2.32
1334 1613 1.243902 ACCAAACGGTTCATCGCAAT 58.756 45.000 0.00 0.00 30.22 3.56
1335 1614 1.025812 AACCAAACGGTTCATCGCAA 58.974 45.000 0.00 0.00 43.61 4.85
1336 1615 1.025812 AAACCAAACGGTTCATCGCA 58.974 45.000 0.00 0.00 46.41 5.10
1338 1617 1.604755 TCCAAACCAAACGGTTCATCG 59.395 47.619 0.00 0.00 46.41 3.84
1344 1623 1.144093 TCCTCATCCAAACCAAACGGT 59.856 47.619 0.00 0.00 38.95 4.83
1360 1647 0.539051 CCAGGACCATCACACTCCTC 59.461 60.000 0.00 0.00 31.58 3.71
1401 1688 4.699994 TGACTAATCTCTCCCCTTCCTTT 58.300 43.478 0.00 0.00 0.00 3.11
1423 1710 9.614792 GGAGTAGAACATTACCATTTCACTAAT 57.385 33.333 0.00 0.00 0.00 1.73
1424 1711 8.044908 GGGAGTAGAACATTACCATTTCACTAA 58.955 37.037 0.00 0.00 0.00 2.24
1425 1712 7.402071 AGGGAGTAGAACATTACCATTTCACTA 59.598 37.037 0.00 0.00 0.00 2.74
1426 1713 6.215636 AGGGAGTAGAACATTACCATTTCACT 59.784 38.462 0.00 0.00 0.00 3.41
1427 1714 6.415573 AGGGAGTAGAACATTACCATTTCAC 58.584 40.000 0.00 0.00 0.00 3.18
1428 1715 6.352737 GGAGGGAGTAGAACATTACCATTTCA 60.353 42.308 0.00 0.00 0.00 2.69
1429 1716 6.056236 GGAGGGAGTAGAACATTACCATTTC 58.944 44.000 0.00 0.00 0.00 2.17
1430 1717 5.396436 CGGAGGGAGTAGAACATTACCATTT 60.396 44.000 0.00 0.00 0.00 2.32
1431 1718 4.101119 CGGAGGGAGTAGAACATTACCATT 59.899 45.833 0.00 0.00 0.00 3.16
1446 1733 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
1447 1734 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
1449 1736 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
1450 1737 3.846360 AGACAAGTAATTCCGAACGGAG 58.154 45.455 15.34 5.60 46.06 4.63
1451 1738 3.671433 CGAGACAAGTAATTCCGAACGGA 60.671 47.826 12.04 12.04 43.52 4.69
1452 1739 2.597305 CGAGACAAGTAATTCCGAACGG 59.403 50.000 6.94 6.94 0.00 4.44
1453 1740 2.597305 CCGAGACAAGTAATTCCGAACG 59.403 50.000 0.00 0.00 0.00 3.95
1454 1741 3.841643 TCCGAGACAAGTAATTCCGAAC 58.158 45.455 0.00 0.00 0.00 3.95
1455 1742 4.524316 TTCCGAGACAAGTAATTCCGAA 57.476 40.909 0.00 0.00 0.00 4.30
1456 1743 4.524316 TTTCCGAGACAAGTAATTCCGA 57.476 40.909 0.00 0.00 0.00 4.55
1457 1744 4.034048 CCATTTCCGAGACAAGTAATTCCG 59.966 45.833 0.00 0.00 0.00 4.30
1458 1745 5.183228 TCCATTTCCGAGACAAGTAATTCC 58.817 41.667 0.00 0.00 0.00 3.01
1459 1746 6.316390 ACATCCATTTCCGAGACAAGTAATTC 59.684 38.462 0.00 0.00 0.00 2.17
1460 1747 6.180472 ACATCCATTTCCGAGACAAGTAATT 58.820 36.000 0.00 0.00 0.00 1.40
1461 1748 5.745227 ACATCCATTTCCGAGACAAGTAAT 58.255 37.500 0.00 0.00 0.00 1.89
1462 1749 5.160607 ACATCCATTTCCGAGACAAGTAA 57.839 39.130 0.00 0.00 0.00 2.24
1463 1750 4.819105 ACATCCATTTCCGAGACAAGTA 57.181 40.909 0.00 0.00 0.00 2.24
1464 1751 3.703001 ACATCCATTTCCGAGACAAGT 57.297 42.857 0.00 0.00 0.00 3.16
1465 1752 5.605534 AGATACATCCATTTCCGAGACAAG 58.394 41.667 0.00 0.00 0.00 3.16
1466 1753 5.614324 AGATACATCCATTTCCGAGACAA 57.386 39.130 0.00 0.00 0.00 3.18
1467 1754 6.016192 GTCTAGATACATCCATTTCCGAGACA 60.016 42.308 0.00 0.00 0.00 3.41
1468 1755 6.383415 GTCTAGATACATCCATTTCCGAGAC 58.617 44.000 0.00 0.00 0.00 3.36
1469 1756 5.181433 CGTCTAGATACATCCATTTCCGAGA 59.819 44.000 0.00 0.00 0.00 4.04
1470 1757 5.394802 CGTCTAGATACATCCATTTCCGAG 58.605 45.833 0.00 0.00 0.00 4.63
1471 1758 4.321008 GCGTCTAGATACATCCATTTCCGA 60.321 45.833 0.00 0.00 0.00 4.55
1472 1759 3.921021 GCGTCTAGATACATCCATTTCCG 59.079 47.826 0.00 0.00 0.00 4.30
1473 1760 5.140747 AGCGTCTAGATACATCCATTTCC 57.859 43.478 0.00 0.00 0.00 3.13
1474 1761 6.678878 TGTAGCGTCTAGATACATCCATTTC 58.321 40.000 0.00 0.00 45.62 2.17
1475 1762 6.650427 TGTAGCGTCTAGATACATCCATTT 57.350 37.500 0.00 0.00 45.62 2.32
1503 1790 1.439679 GAGTACTTGCTTCAACCCGG 58.560 55.000 0.00 0.00 0.00 5.73
1522 1809 8.290325 TGCTACAAAGACATGATATCTACTACG 58.710 37.037 0.00 0.00 0.00 3.51
1527 1814 6.875726 GGCATGCTACAAAGACATGATATCTA 59.124 38.462 18.92 0.00 38.47 1.98
1528 1815 5.704515 GGCATGCTACAAAGACATGATATCT 59.295 40.000 18.92 0.00 38.47 1.98
1539 1826 2.715046 TGGAGAAGGCATGCTACAAAG 58.285 47.619 18.92 0.00 0.00 2.77
1540 1827 2.877097 TGGAGAAGGCATGCTACAAA 57.123 45.000 18.92 0.00 0.00 2.83
1581 1868 2.477176 AACGCCGTTCAAGCAGCAA 61.477 52.632 0.00 0.00 0.00 3.91
1582 1869 2.899838 AACGCCGTTCAAGCAGCA 60.900 55.556 0.00 0.00 0.00 4.41
1583 1870 2.427410 CAACGCCGTTCAAGCAGC 60.427 61.111 0.00 0.00 0.00 5.25
1621 1908 2.163010 GCGACAGGCACTACTTACAGTA 59.837 50.000 0.00 0.00 42.87 2.74
1623 1910 1.630148 GCGACAGGCACTACTTACAG 58.370 55.000 0.00 0.00 42.87 2.74
1694 1981 1.071385 CATATGGAGTGCAGGGGACTC 59.929 57.143 9.10 9.10 40.21 3.36
1695 1982 1.135094 CATATGGAGTGCAGGGGACT 58.865 55.000 0.00 0.00 46.44 3.85
1703 1990 1.532868 GAATCGGTGCATATGGAGTGC 59.467 52.381 4.56 0.00 42.81 4.40
1736 2023 7.646351 CGCAAGATTATTTTCCACGAGTGGG 62.646 48.000 20.79 4.20 46.53 4.61
1777 2066 1.001268 GTGACTCGCTGAACAGACAGA 60.001 52.381 5.97 1.36 39.94 3.41
1790 2110 3.248363 TGTTGCAAAGAGAATGTGACTCG 59.752 43.478 0.00 0.00 39.12 4.18
1855 2463 2.789409 AGGCAGAACCCATGAGTAAC 57.211 50.000 0.00 0.00 40.58 2.50
1885 2493 1.960417 GGCTCTTCTTCCATGCCTAC 58.040 55.000 0.00 0.00 40.36 3.18
1899 2507 2.097825 GCATTGGAATTGTCAGGCTCT 58.902 47.619 0.00 0.00 0.00 4.09
1925 2533 2.027377 CCTGTGCTCTCCTCTTGTTCAT 60.027 50.000 0.00 0.00 0.00 2.57
1929 2537 1.123861 TGCCTGTGCTCTCCTCTTGT 61.124 55.000 0.00 0.00 38.71 3.16
1976 2584 0.396435 TCGGAGCCTTTTCAGCTTCA 59.604 50.000 0.00 0.00 41.75 3.02
1977 2585 1.668237 GATCGGAGCCTTTTCAGCTTC 59.332 52.381 0.00 0.00 41.75 3.86
2019 2627 4.655527 CCGTCGATGTAGATGGGC 57.344 61.111 3.52 0.00 42.22 5.36
2123 2731 1.336632 CCTCTTCTGGGCTCTGGGAG 61.337 65.000 7.16 7.16 0.00 4.30
2124 2732 1.306482 CCTCTTCTGGGCTCTGGGA 60.306 63.158 0.00 0.00 0.00 4.37
2171 2779 1.358759 GATTTATGTTGGCCCGCCG 59.641 57.895 0.00 0.00 39.42 6.46
2173 2781 0.668535 GAGGATTTATGTTGGCCCGC 59.331 55.000 0.00 0.00 0.00 6.13
2175 2783 2.952310 GTCTGAGGATTTATGTTGGCCC 59.048 50.000 0.00 0.00 0.00 5.80
2182 2790 2.554142 TGCTGCGTCTGAGGATTTATG 58.446 47.619 0.82 0.00 0.00 1.90
2218 2826 4.693095 GTCAATCAGGACAGGAAACTTCTC 59.307 45.833 0.00 0.00 40.21 2.87
2230 2838 4.686972 TCGATGAGAATGTCAATCAGGAC 58.313 43.478 0.00 0.00 39.19 3.85
2236 2844 7.147976 TCATTCGTATCGATGAGAATGTCAAT 58.852 34.615 32.61 14.19 45.85 2.57
2524 3135 6.293955 GGATTCAAGCTAGCAACAAACTTACA 60.294 38.462 18.83 0.00 0.00 2.41
2646 3257 2.203153 AAGCAAACCCGACTGCGT 60.203 55.556 0.00 0.00 43.51 5.24
3129 3740 1.790623 CCACAGTTCAGAAACCGTACG 59.209 52.381 8.69 8.69 35.92 3.67
3345 3962 7.750229 TTCTGTAAATTTCTGTTGCATCTCT 57.250 32.000 0.00 0.00 0.00 3.10
3346 3963 7.008992 GCATTCTGTAAATTTCTGTTGCATCTC 59.991 37.037 0.00 0.00 0.00 2.75
3693 4313 3.181512 GCTCTTGCAAGTACTGATGAAGC 60.182 47.826 25.19 18.55 39.41 3.86
3697 4317 2.676839 CTGGCTCTTGCAAGTACTGATG 59.323 50.000 25.19 8.01 41.91 3.07
3835 4455 2.985896 TGCAGTCCTTATTGCTACACC 58.014 47.619 0.00 0.00 39.02 4.16
4015 4642 0.318614 CACCGTTTGGCATTTCGCTT 60.319 50.000 0.00 0.00 41.91 4.68
4228 4855 7.210174 TCCAAGTTATCGGATGAACTTATCAG 58.790 38.462 17.36 10.26 42.57 2.90
4346 5034 5.560724 AGGAATAGTGCTCTAACTTTTGCA 58.439 37.500 0.00 0.00 33.81 4.08
4387 5882 4.749598 CCAAACAAAACAGCCAAGGATAAC 59.250 41.667 0.00 0.00 0.00 1.89
4493 5988 1.220817 GGCGCACAAACCACCAAATG 61.221 55.000 10.83 0.00 0.00 2.32
4519 6014 1.222115 ACCTTGCTCGACGAACAAGC 61.222 55.000 27.61 15.71 39.55 4.01
4568 6063 0.242017 AAAAAGATGAGCAGGCACGC 59.758 50.000 0.00 0.00 0.00 5.34
4942 7119 8.760569 CGTATTCACTTTTTGCAGGTTATTTTT 58.239 29.630 0.00 0.00 0.00 1.94
5102 8364 8.212312 TGCCTTTAATATTACTCCACCGAATTA 58.788 33.333 0.00 0.00 0.00 1.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.