Multiple sequence alignment - TraesCS5D01G201200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G201200 chr5D 100.000 3722 0 0 1 3722 304875446 304879167 0.000000e+00 6874
1 TraesCS5D01G201200 chr5A 94.373 3110 103 35 663 3722 393252097 393255184 0.000000e+00 4708
2 TraesCS5D01G201200 chr5B 93.669 2922 90 29 662 3539 349711290 349714160 0.000000e+00 4283
3 TraesCS5D01G201200 chr5B 91.339 127 1 2 3606 3722 349714643 349714769 8.270000e-37 165
4 TraesCS5D01G201200 chr6D 97.789 407 9 0 1 407 265255651 265255245 0.000000e+00 702
5 TraesCS5D01G201200 chr4D 97.789 407 9 0 1 407 398750556 398750150 0.000000e+00 702
6 TraesCS5D01G201200 chr7D 97.555 409 10 0 1 409 379426274 379425866 0.000000e+00 701
7 TraesCS5D01G201200 chr7D 92.473 465 27 7 1 461 197088342 197087882 0.000000e+00 658
8 TraesCS5D01G201200 chr3D 97.549 408 10 0 1 408 328535751 328535344 0.000000e+00 699
9 TraesCS5D01G201200 chr1D 97.549 408 10 0 1 408 411500658 411501065 0.000000e+00 699
10 TraesCS5D01G201200 chr1D 96.429 420 15 0 1 420 460692798 460693217 0.000000e+00 693
11 TraesCS5D01G201200 chr2D 97.324 411 10 1 1 411 627686046 627685637 0.000000e+00 697
12 TraesCS5D01G201200 chr2D 91.221 262 23 0 408 669 646297636 646297897 1.270000e-94 357
13 TraesCS5D01G201200 chr2D 91.026 234 21 0 436 669 646282718 646282485 2.160000e-82 316
14 TraesCS5D01G201200 chr4A 95.381 433 17 3 1 431 18792628 18793059 0.000000e+00 686


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G201200 chr5D 304875446 304879167 3721 False 6874 6874 100.000 1 3722 1 chr5D.!!$F1 3721
1 TraesCS5D01G201200 chr5A 393252097 393255184 3087 False 4708 4708 94.373 663 3722 1 chr5A.!!$F1 3059
2 TraesCS5D01G201200 chr5B 349711290 349714769 3479 False 2224 4283 92.504 662 3722 2 chr5B.!!$F1 3060

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
358 359 0.031721 GTTACCATCCGCCCTAGACG 59.968 60.0 0.0 0.0 0.00 4.18 F
484 485 0.176680 GCAGAGAATCCAGCCGAGAA 59.823 55.0 0.0 0.0 33.66 2.87 F
488 489 0.253327 AGAATCCAGCCGAGAAACCC 59.747 55.0 0.0 0.0 0.00 4.11 F
2322 2362 0.319900 ACAGCAGCAACTACCTGTCG 60.320 55.0 0.0 0.0 33.57 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2322 2362 1.079057 GCCGAGGAGGTTCTGGAAC 60.079 63.158 5.02 5.02 43.7 3.62 R
2466 2506 0.760567 CCTCCGAGACCATCATCCCA 60.761 60.000 0.00 0.00 0.0 4.37 R
2502 2542 0.384353 GGACGTCGCTTCTTTGTTGC 60.384 55.000 9.92 0.00 0.0 4.17 R
3124 3189 0.827925 ACAGACTGCCGGAGAACTCA 60.828 55.000 5.05 0.00 0.0 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 7.818493 TGAAGATACAAGATTGAAGACTTCG 57.182 36.000 10.56 0.00 34.37 3.79
29 30 7.378966 TGAAGATACAAGATTGAAGACTTCGT 58.621 34.615 10.56 1.87 34.37 3.85
30 31 7.542477 TGAAGATACAAGATTGAAGACTTCGTC 59.458 37.037 10.56 10.67 34.37 4.20
31 32 6.334202 AGATACAAGATTGAAGACTTCGTCC 58.666 40.000 10.56 2.18 32.18 4.79
32 33 3.665190 ACAAGATTGAAGACTTCGTCCC 58.335 45.455 10.56 0.53 32.18 4.46
33 34 2.656560 AGATTGAAGACTTCGTCCCG 57.343 50.000 10.56 0.00 32.18 5.14
34 35 1.893801 AGATTGAAGACTTCGTCCCGT 59.106 47.619 10.56 0.00 32.18 5.28
35 36 1.993370 GATTGAAGACTTCGTCCCGTG 59.007 52.381 10.56 0.00 32.18 4.94
36 37 0.748450 TTGAAGACTTCGTCCCGTGT 59.252 50.000 10.56 0.00 32.18 4.49
37 38 0.313043 TGAAGACTTCGTCCCGTGTC 59.687 55.000 10.56 0.00 32.18 3.67
38 39 0.388263 GAAGACTTCGTCCCGTGTCC 60.388 60.000 0.00 0.00 34.39 4.02
39 40 2.126580 GACTTCGTCCCGTGTCCG 60.127 66.667 0.00 0.00 0.00 4.79
53 54 3.273654 TCCGGGTGGGACTCTCCT 61.274 66.667 0.00 0.00 40.94 3.69
54 55 2.284699 CCGGGTGGGACTCTCCTT 60.285 66.667 0.00 0.00 38.47 3.36
55 56 1.918800 CCGGGTGGGACTCTCCTTT 60.919 63.158 0.00 0.00 38.47 3.11
56 57 1.296715 CGGGTGGGACTCTCCTTTG 59.703 63.158 0.00 0.00 36.57 2.77
57 58 1.002011 GGGTGGGACTCTCCTTTGC 60.002 63.158 0.00 0.00 36.57 3.68
58 59 1.376037 GGTGGGACTCTCCTTTGCG 60.376 63.158 0.00 0.00 36.57 4.85
59 60 1.371558 GTGGGACTCTCCTTTGCGT 59.628 57.895 0.00 0.00 36.57 5.24
60 61 0.951040 GTGGGACTCTCCTTTGCGTG 60.951 60.000 0.00 0.00 36.57 5.34
61 62 1.376037 GGGACTCTCCTTTGCGTGG 60.376 63.158 0.00 0.00 36.57 4.94
62 63 1.671742 GGACTCTCCTTTGCGTGGA 59.328 57.895 0.00 0.00 32.53 4.02
63 64 0.034896 GGACTCTCCTTTGCGTGGAA 59.965 55.000 0.00 0.00 32.53 3.53
64 65 1.433534 GACTCTCCTTTGCGTGGAAG 58.566 55.000 0.00 0.00 32.61 3.46
65 66 0.035458 ACTCTCCTTTGCGTGGAAGG 59.965 55.000 7.12 7.12 44.06 3.46
74 75 2.956987 CGTGGAAGGCAAGCTTGG 59.043 61.111 27.10 9.80 0.00 3.61
82 83 4.173971 GCAAGCTTGGCAATTCGG 57.826 55.556 27.10 0.00 0.00 4.30
83 84 1.586028 GCAAGCTTGGCAATTCGGA 59.414 52.632 27.10 0.00 0.00 4.55
84 85 0.174162 GCAAGCTTGGCAATTCGGAT 59.826 50.000 27.10 0.00 0.00 4.18
85 86 1.405105 GCAAGCTTGGCAATTCGGATA 59.595 47.619 27.10 0.00 0.00 2.59
86 87 2.035066 GCAAGCTTGGCAATTCGGATAT 59.965 45.455 27.10 0.00 0.00 1.63
87 88 3.635331 CAAGCTTGGCAATTCGGATATG 58.365 45.455 19.14 0.00 0.00 1.78
88 89 2.936202 AGCTTGGCAATTCGGATATGT 58.064 42.857 0.00 0.00 0.00 2.29
89 90 4.085357 AGCTTGGCAATTCGGATATGTA 57.915 40.909 0.00 0.00 0.00 2.29
90 91 4.067896 AGCTTGGCAATTCGGATATGTAG 58.932 43.478 0.00 0.00 0.00 2.74
91 92 4.065088 GCTTGGCAATTCGGATATGTAGA 58.935 43.478 0.00 0.00 0.00 2.59
92 93 4.697352 GCTTGGCAATTCGGATATGTAGAT 59.303 41.667 0.00 0.00 0.00 1.98
93 94 5.163814 GCTTGGCAATTCGGATATGTAGATC 60.164 44.000 0.00 0.00 0.00 2.75
94 95 5.745312 TGGCAATTCGGATATGTAGATCT 57.255 39.130 0.00 0.00 0.00 2.75
95 96 5.724328 TGGCAATTCGGATATGTAGATCTC 58.276 41.667 0.00 0.00 0.00 2.75
96 97 5.112686 GGCAATTCGGATATGTAGATCTCC 58.887 45.833 0.00 0.00 0.00 3.71
97 98 5.105146 GGCAATTCGGATATGTAGATCTCCT 60.105 44.000 0.00 0.00 0.00 3.69
98 99 6.402222 GCAATTCGGATATGTAGATCTCCTT 58.598 40.000 0.00 0.00 0.00 3.36
99 100 6.533367 GCAATTCGGATATGTAGATCTCCTTC 59.467 42.308 0.00 0.00 0.00 3.46
100 101 6.783708 ATTCGGATATGTAGATCTCCTTCC 57.216 41.667 0.00 0.00 0.00 3.46
101 102 5.522315 TCGGATATGTAGATCTCCTTCCT 57.478 43.478 0.00 0.00 0.00 3.36
102 103 5.893500 TCGGATATGTAGATCTCCTTCCTT 58.106 41.667 0.00 0.00 0.00 3.36
103 104 5.712446 TCGGATATGTAGATCTCCTTCCTTG 59.288 44.000 0.00 0.00 0.00 3.61
104 105 5.478679 CGGATATGTAGATCTCCTTCCTTGT 59.521 44.000 0.00 0.00 0.00 3.16
105 106 6.659668 CGGATATGTAGATCTCCTTCCTTGTA 59.340 42.308 0.00 0.00 0.00 2.41
106 107 7.176865 CGGATATGTAGATCTCCTTCCTTGTAA 59.823 40.741 0.00 0.00 0.00 2.41
107 108 8.308207 GGATATGTAGATCTCCTTCCTTGTAAC 58.692 40.741 0.00 0.00 0.00 2.50
108 109 5.934402 TGTAGATCTCCTTCCTTGTAACC 57.066 43.478 0.00 0.00 0.00 2.85
109 110 4.401519 TGTAGATCTCCTTCCTTGTAACCG 59.598 45.833 0.00 0.00 0.00 4.44
110 111 3.709587 AGATCTCCTTCCTTGTAACCGA 58.290 45.455 0.00 0.00 0.00 4.69
111 112 3.447944 AGATCTCCTTCCTTGTAACCGAC 59.552 47.826 0.00 0.00 0.00 4.79
112 113 2.885616 TCTCCTTCCTTGTAACCGACT 58.114 47.619 0.00 0.00 0.00 4.18
113 114 2.824341 TCTCCTTCCTTGTAACCGACTC 59.176 50.000 0.00 0.00 0.00 3.36
114 115 2.826725 CTCCTTCCTTGTAACCGACTCT 59.173 50.000 0.00 0.00 0.00 3.24
115 116 2.561419 TCCTTCCTTGTAACCGACTCTG 59.439 50.000 0.00 0.00 0.00 3.35
116 117 2.299297 CCTTCCTTGTAACCGACTCTGT 59.701 50.000 0.00 0.00 0.00 3.41
117 118 3.318017 CTTCCTTGTAACCGACTCTGTG 58.682 50.000 0.00 0.00 0.00 3.66
118 119 2.313317 TCCTTGTAACCGACTCTGTGT 58.687 47.619 0.00 0.00 0.00 3.72
119 120 3.489355 TCCTTGTAACCGACTCTGTGTA 58.511 45.455 0.00 0.00 0.00 2.90
120 121 3.890756 TCCTTGTAACCGACTCTGTGTAA 59.109 43.478 0.00 0.00 0.00 2.41
121 122 3.985925 CCTTGTAACCGACTCTGTGTAAC 59.014 47.826 0.00 0.00 37.35 2.50
122 123 3.648339 TGTAACCGACTCTGTGTAACC 57.352 47.619 0.00 0.00 34.36 2.85
123 124 2.297033 TGTAACCGACTCTGTGTAACCC 59.703 50.000 0.00 0.00 34.36 4.11
124 125 1.713297 AACCGACTCTGTGTAACCCT 58.287 50.000 0.00 0.00 34.36 4.34
125 126 2.592102 ACCGACTCTGTGTAACCCTA 57.408 50.000 0.00 0.00 34.36 3.53
126 127 2.444421 ACCGACTCTGTGTAACCCTAG 58.556 52.381 0.00 0.00 34.36 3.02
127 128 1.134560 CCGACTCTGTGTAACCCTAGC 59.865 57.143 0.00 0.00 34.36 3.42
128 129 1.134560 CGACTCTGTGTAACCCTAGCC 59.865 57.143 0.00 0.00 34.36 3.93
129 130 1.481363 GACTCTGTGTAACCCTAGCCC 59.519 57.143 0.00 0.00 34.36 5.19
130 131 0.831307 CTCTGTGTAACCCTAGCCCC 59.169 60.000 0.00 0.00 34.36 5.80
131 132 0.619543 TCTGTGTAACCCTAGCCCCC 60.620 60.000 0.00 0.00 34.36 5.40
132 133 0.620700 CTGTGTAACCCTAGCCCCCT 60.621 60.000 0.00 0.00 34.36 4.79
133 134 0.619543 TGTGTAACCCTAGCCCCCTC 60.620 60.000 0.00 0.00 34.36 4.30
134 135 1.003835 TGTAACCCTAGCCCCCTCC 59.996 63.158 0.00 0.00 0.00 4.30
135 136 2.138831 GTAACCCTAGCCCCCTCCG 61.139 68.421 0.00 0.00 0.00 4.63
136 137 3.399911 TAACCCTAGCCCCCTCCGG 62.400 68.421 0.00 0.00 0.00 5.14
144 145 2.203182 CCCCCTCCGGTGCCTATA 59.797 66.667 0.00 0.00 0.00 1.31
145 146 1.229529 CCCCCTCCGGTGCCTATAT 60.230 63.158 0.00 0.00 0.00 0.86
146 147 0.042131 CCCCCTCCGGTGCCTATATA 59.958 60.000 0.00 0.00 0.00 0.86
147 148 1.553884 CCCCCTCCGGTGCCTATATAA 60.554 57.143 0.00 0.00 0.00 0.98
148 149 2.262637 CCCCTCCGGTGCCTATATAAA 58.737 52.381 0.00 0.00 0.00 1.40
149 150 2.027469 CCCCTCCGGTGCCTATATAAAC 60.027 54.545 0.00 0.00 0.00 2.01
150 151 2.027469 CCCTCCGGTGCCTATATAAACC 60.027 54.545 0.00 0.68 0.00 3.27
188 189 7.302350 CGTAGGACAACAACAATCATAATCA 57.698 36.000 0.00 0.00 0.00 2.57
189 190 7.919690 CGTAGGACAACAACAATCATAATCAT 58.080 34.615 0.00 0.00 0.00 2.45
190 191 9.040939 CGTAGGACAACAACAATCATAATCATA 57.959 33.333 0.00 0.00 0.00 2.15
192 193 8.455903 AGGACAACAACAATCATAATCATAGG 57.544 34.615 0.00 0.00 0.00 2.57
193 194 7.013655 AGGACAACAACAATCATAATCATAGGC 59.986 37.037 0.00 0.00 0.00 3.93
194 195 7.013655 GGACAACAACAATCATAATCATAGGCT 59.986 37.037 0.00 0.00 0.00 4.58
195 196 8.978874 ACAACAACAATCATAATCATAGGCTA 57.021 30.769 0.00 0.00 0.00 3.93
196 197 9.060347 ACAACAACAATCATAATCATAGGCTAG 57.940 33.333 0.00 0.00 0.00 3.42
197 198 7.678947 ACAACAATCATAATCATAGGCTAGC 57.321 36.000 6.04 6.04 0.00 3.42
198 199 7.456725 ACAACAATCATAATCATAGGCTAGCT 58.543 34.615 15.72 3.22 0.00 3.32
199 200 7.941238 ACAACAATCATAATCATAGGCTAGCTT 59.059 33.333 15.72 10.11 0.00 3.74
200 201 8.449397 CAACAATCATAATCATAGGCTAGCTTC 58.551 37.037 15.72 0.00 0.00 3.86
201 202 7.915930 ACAATCATAATCATAGGCTAGCTTCT 58.084 34.615 15.72 6.71 0.00 2.85
202 203 9.040259 ACAATCATAATCATAGGCTAGCTTCTA 57.960 33.333 15.72 8.91 0.00 2.10
205 206 8.016301 TCATAATCATAGGCTAGCTTCTATGG 57.984 38.462 27.12 17.23 41.68 2.74
206 207 7.621285 TCATAATCATAGGCTAGCTTCTATGGT 59.379 37.037 27.12 22.32 41.68 3.55
207 208 6.694445 AATCATAGGCTAGCTTCTATGGTT 57.306 37.500 27.12 25.25 40.47 3.67
208 209 6.694445 ATCATAGGCTAGCTTCTATGGTTT 57.306 37.500 27.12 16.55 41.68 3.27
209 210 7.798710 ATCATAGGCTAGCTTCTATGGTTTA 57.201 36.000 27.12 16.08 41.68 2.01
210 211 7.233389 TCATAGGCTAGCTTCTATGGTTTAG 57.767 40.000 27.12 11.53 41.68 1.85
211 212 4.344359 AGGCTAGCTTCTATGGTTTAGC 57.656 45.455 15.72 0.00 34.32 3.09
212 213 3.403968 GGCTAGCTTCTATGGTTTAGCC 58.596 50.000 15.72 4.76 44.26 3.93
213 214 3.071747 GGCTAGCTTCTATGGTTTAGCCT 59.928 47.826 15.72 0.00 46.03 4.58
214 215 4.311606 GCTAGCTTCTATGGTTTAGCCTC 58.688 47.826 7.70 0.00 38.35 4.70
215 216 4.039852 GCTAGCTTCTATGGTTTAGCCTCT 59.960 45.833 7.70 0.00 38.35 3.69
216 217 5.244178 GCTAGCTTCTATGGTTTAGCCTCTA 59.756 44.000 7.70 0.00 38.35 2.43
217 218 5.538849 AGCTTCTATGGTTTAGCCTCTAC 57.461 43.478 0.00 0.00 38.35 2.59
218 219 4.038162 AGCTTCTATGGTTTAGCCTCTACG 59.962 45.833 0.00 0.00 38.35 3.51
219 220 4.037684 GCTTCTATGGTTTAGCCTCTACGA 59.962 45.833 0.00 0.00 38.35 3.43
220 221 5.279056 GCTTCTATGGTTTAGCCTCTACGAT 60.279 44.000 0.00 0.00 38.35 3.73
221 222 5.961396 TCTATGGTTTAGCCTCTACGATC 57.039 43.478 0.00 0.00 38.35 3.69
222 223 5.632118 TCTATGGTTTAGCCTCTACGATCT 58.368 41.667 0.00 0.00 38.35 2.75
223 224 4.857509 ATGGTTTAGCCTCTACGATCTC 57.142 45.455 0.00 0.00 38.35 2.75
224 225 2.617308 TGGTTTAGCCTCTACGATCTCG 59.383 50.000 0.00 0.00 41.02 4.04
225 226 3.934331 TGGTTTAGCCTCTACGATCTCGT 60.934 47.826 10.40 10.40 46.22 4.18
226 227 5.982676 TGGTTTAGCCTCTACGATCTCGTG 61.983 50.000 15.08 5.81 45.01 4.35
241 242 4.703645 TCTCGTGGTAGATCAACTCTTG 57.296 45.455 0.00 0.00 35.28 3.02
242 243 4.079970 TCTCGTGGTAGATCAACTCTTGT 58.920 43.478 0.00 0.00 35.28 3.16
243 244 5.250982 TCTCGTGGTAGATCAACTCTTGTA 58.749 41.667 0.00 0.00 35.28 2.41
244 245 5.708697 TCTCGTGGTAGATCAACTCTTGTAA 59.291 40.000 0.00 0.00 35.28 2.41
245 246 6.377429 TCTCGTGGTAGATCAACTCTTGTAAT 59.623 38.462 0.00 0.00 35.28 1.89
246 247 7.555195 TCTCGTGGTAGATCAACTCTTGTAATA 59.445 37.037 0.00 0.00 35.28 0.98
247 248 7.478322 TCGTGGTAGATCAACTCTTGTAATAC 58.522 38.462 0.00 0.00 35.28 1.89
248 249 7.338703 TCGTGGTAGATCAACTCTTGTAATACT 59.661 37.037 0.00 0.00 35.28 2.12
249 250 7.644551 CGTGGTAGATCAACTCTTGTAATACTC 59.355 40.741 0.00 0.00 35.28 2.59
250 251 8.467598 GTGGTAGATCAACTCTTGTAATACTCA 58.532 37.037 0.00 0.00 35.28 3.41
251 252 9.201989 TGGTAGATCAACTCTTGTAATACTCAT 57.798 33.333 0.00 0.00 35.28 2.90
274 275 9.939802 TCATATCATCAAGATCAATCAAGTAGG 57.060 33.333 0.00 0.00 38.19 3.18
275 276 9.939802 CATATCATCAAGATCAATCAAGTAGGA 57.060 33.333 0.00 0.00 38.19 2.94
277 278 8.905660 ATCATCAAGATCAATCAAGTAGGAAG 57.094 34.615 0.00 0.00 28.20 3.46
278 279 7.855375 TCATCAAGATCAATCAAGTAGGAAGT 58.145 34.615 0.00 0.00 0.00 3.01
279 280 8.981659 TCATCAAGATCAATCAAGTAGGAAGTA 58.018 33.333 0.00 0.00 0.00 2.24
280 281 9.775854 CATCAAGATCAATCAAGTAGGAAGTAT 57.224 33.333 0.00 0.00 0.00 2.12
281 282 9.775854 ATCAAGATCAATCAAGTAGGAAGTATG 57.224 33.333 0.00 0.00 0.00 2.39
282 283 8.206867 TCAAGATCAATCAAGTAGGAAGTATGG 58.793 37.037 0.00 0.00 0.00 2.74
283 284 7.682787 AGATCAATCAAGTAGGAAGTATGGT 57.317 36.000 0.00 0.00 0.00 3.55
284 285 8.783660 AGATCAATCAAGTAGGAAGTATGGTA 57.216 34.615 0.00 0.00 0.00 3.25
285 286 9.386122 AGATCAATCAAGTAGGAAGTATGGTAT 57.614 33.333 0.00 0.00 0.00 2.73
289 290 9.490379 CAATCAAGTAGGAAGTATGGTATTACC 57.510 37.037 5.87 5.87 39.22 2.85
290 291 9.448587 AATCAAGTAGGAAGTATGGTATTACCT 57.551 33.333 13.90 0.00 39.58 3.08
291 292 8.474710 TCAAGTAGGAAGTATGGTATTACCTC 57.525 38.462 13.90 2.88 39.58 3.85
292 293 7.508296 TCAAGTAGGAAGTATGGTATTACCTCC 59.492 40.741 13.90 11.29 39.58 4.30
293 294 6.930475 AGTAGGAAGTATGGTATTACCTCCA 58.070 40.000 13.90 0.00 39.58 3.86
294 295 7.545546 AGTAGGAAGTATGGTATTACCTCCAT 58.454 38.462 13.90 2.44 45.10 3.41
295 296 6.936968 AGGAAGTATGGTATTACCTCCATC 57.063 41.667 13.90 6.17 42.56 3.51
296 297 5.480772 AGGAAGTATGGTATTACCTCCATCG 59.519 44.000 13.90 0.00 42.56 3.84
297 298 5.479375 GGAAGTATGGTATTACCTCCATCGA 59.521 44.000 13.90 0.00 42.56 3.59
298 299 6.350277 GGAAGTATGGTATTACCTCCATCGAG 60.350 46.154 13.90 0.00 42.56 4.04
299 300 5.888901 AGTATGGTATTACCTCCATCGAGA 58.111 41.667 13.90 0.00 42.56 4.04
300 301 5.946972 AGTATGGTATTACCTCCATCGAGAG 59.053 44.000 13.90 0.00 42.56 3.20
306 307 3.610669 CTCCATCGAGAGGGCCCG 61.611 72.222 18.44 4.06 38.52 6.13
307 308 4.137615 TCCATCGAGAGGGCCCGA 62.138 66.667 18.44 10.63 39.25 5.14
308 309 3.154473 CCATCGAGAGGGCCCGAA 61.154 66.667 18.44 1.01 38.36 4.30
309 310 2.107141 CATCGAGAGGGCCCGAAC 59.893 66.667 18.44 12.45 38.36 3.95
310 311 3.155167 ATCGAGAGGGCCCGAACC 61.155 66.667 18.44 7.31 38.36 3.62
311 312 3.680920 ATCGAGAGGGCCCGAACCT 62.681 63.158 18.44 12.55 42.18 3.50
312 313 4.148825 CGAGAGGGCCCGAACCTG 62.149 72.222 18.44 1.23 38.79 4.00
313 314 3.787001 GAGAGGGCCCGAACCTGG 61.787 72.222 18.44 0.00 38.79 4.45
321 322 3.970205 CCCGAACCTGGGTAAACAT 57.030 52.632 0.00 0.00 44.76 2.71
322 323 2.209690 CCCGAACCTGGGTAAACATT 57.790 50.000 0.00 0.00 44.76 2.71
323 324 1.816224 CCCGAACCTGGGTAAACATTG 59.184 52.381 0.00 0.00 44.76 2.82
324 325 2.510613 CCGAACCTGGGTAAACATTGT 58.489 47.619 0.00 0.00 0.00 2.71
325 326 2.888414 CCGAACCTGGGTAAACATTGTT 59.112 45.455 0.00 0.00 0.00 2.83
326 327 3.319689 CCGAACCTGGGTAAACATTGTTT 59.680 43.478 18.13 18.13 0.00 2.83
327 328 4.542735 CGAACCTGGGTAAACATTGTTTC 58.457 43.478 17.64 9.83 0.00 2.78
328 329 4.557895 CGAACCTGGGTAAACATTGTTTCC 60.558 45.833 17.64 16.77 0.00 3.13
329 330 3.236047 ACCTGGGTAAACATTGTTTCCC 58.764 45.455 26.51 26.51 35.85 3.97
330 331 2.565391 CCTGGGTAAACATTGTTTCCCC 59.435 50.000 27.53 27.53 34.54 4.81
331 332 2.565391 CTGGGTAAACATTGTTTCCCCC 59.435 50.000 29.70 28.52 34.54 5.40
332 333 1.546923 GGGTAAACATTGTTTCCCCCG 59.453 52.381 25.17 0.00 0.00 5.73
333 334 1.067425 GGTAAACATTGTTTCCCCCGC 60.067 52.381 17.64 3.92 0.00 6.13
334 335 1.067425 GTAAACATTGTTTCCCCCGCC 60.067 52.381 17.64 0.00 0.00 6.13
335 336 0.471022 AAACATTGTTTCCCCCGCCT 60.471 50.000 8.97 0.00 0.00 5.52
336 337 0.898326 AACATTGTTTCCCCCGCCTC 60.898 55.000 0.00 0.00 0.00 4.70
337 338 2.052104 CATTGTTTCCCCCGCCTCC 61.052 63.158 0.00 0.00 0.00 4.30
338 339 2.238701 ATTGTTTCCCCCGCCTCCT 61.239 57.895 0.00 0.00 0.00 3.69
339 340 2.499303 ATTGTTTCCCCCGCCTCCTG 62.499 60.000 0.00 0.00 0.00 3.86
340 341 3.647771 GTTTCCCCCGCCTCCTGT 61.648 66.667 0.00 0.00 0.00 4.00
341 342 2.856988 TTTCCCCCGCCTCCTGTT 60.857 61.111 0.00 0.00 0.00 3.16
342 343 1.539372 TTTCCCCCGCCTCCTGTTA 60.539 57.895 0.00 0.00 0.00 2.41
343 344 1.844544 TTTCCCCCGCCTCCTGTTAC 61.845 60.000 0.00 0.00 0.00 2.50
344 345 3.793888 CCCCCGCCTCCTGTTACC 61.794 72.222 0.00 0.00 0.00 2.85
345 346 3.006728 CCCCGCCTCCTGTTACCA 61.007 66.667 0.00 0.00 0.00 3.25
346 347 2.375345 CCCCGCCTCCTGTTACCAT 61.375 63.158 0.00 0.00 0.00 3.55
347 348 1.146263 CCCGCCTCCTGTTACCATC 59.854 63.158 0.00 0.00 0.00 3.51
348 349 1.146263 CCGCCTCCTGTTACCATCC 59.854 63.158 0.00 0.00 0.00 3.51
349 350 1.227263 CGCCTCCTGTTACCATCCG 60.227 63.158 0.00 0.00 0.00 4.18
350 351 1.523938 GCCTCCTGTTACCATCCGC 60.524 63.158 0.00 0.00 0.00 5.54
351 352 1.146263 CCTCCTGTTACCATCCGCC 59.854 63.158 0.00 0.00 0.00 6.13
352 353 1.146263 CTCCTGTTACCATCCGCCC 59.854 63.158 0.00 0.00 0.00 6.13
353 354 1.306654 TCCTGTTACCATCCGCCCT 60.307 57.895 0.00 0.00 0.00 5.19
354 355 0.031917 TCCTGTTACCATCCGCCCTA 60.032 55.000 0.00 0.00 0.00 3.53
355 356 0.393077 CCTGTTACCATCCGCCCTAG 59.607 60.000 0.00 0.00 0.00 3.02
356 357 1.410004 CTGTTACCATCCGCCCTAGA 58.590 55.000 0.00 0.00 0.00 2.43
357 358 1.068741 CTGTTACCATCCGCCCTAGAC 59.931 57.143 0.00 0.00 0.00 2.59
358 359 0.031721 GTTACCATCCGCCCTAGACG 59.968 60.000 0.00 0.00 0.00 4.18
359 360 1.741327 TTACCATCCGCCCTAGACGC 61.741 60.000 0.00 0.00 0.00 5.19
360 361 2.914756 TACCATCCGCCCTAGACGCA 62.915 60.000 0.00 0.00 0.00 5.24
361 362 2.279517 CATCCGCCCTAGACGCAC 60.280 66.667 0.00 0.00 0.00 5.34
362 363 2.758327 ATCCGCCCTAGACGCACA 60.758 61.111 0.00 0.00 0.00 4.57
363 364 2.786495 ATCCGCCCTAGACGCACAG 61.786 63.158 0.00 0.00 0.00 3.66
364 365 3.760035 CCGCCCTAGACGCACAGT 61.760 66.667 0.00 0.00 0.00 3.55
365 366 2.261671 CGCCCTAGACGCACAGTT 59.738 61.111 0.00 0.00 0.00 3.16
366 367 1.805945 CGCCCTAGACGCACAGTTC 60.806 63.158 0.00 0.00 0.00 3.01
367 368 1.805945 GCCCTAGACGCACAGTTCG 60.806 63.158 0.00 0.00 0.00 3.95
368 369 1.153823 CCCTAGACGCACAGTTCGG 60.154 63.158 0.00 0.00 0.00 4.30
369 370 1.153823 CCTAGACGCACAGTTCGGG 60.154 63.158 0.00 0.00 0.00 5.14
370 371 1.592400 CCTAGACGCACAGTTCGGGA 61.592 60.000 0.00 0.00 0.00 5.14
371 372 0.456312 CTAGACGCACAGTTCGGGAC 60.456 60.000 0.00 0.00 0.00 4.46
372 373 1.870055 TAGACGCACAGTTCGGGACC 61.870 60.000 0.00 0.00 0.00 4.46
373 374 4.309950 ACGCACAGTTCGGGACCC 62.310 66.667 0.00 0.00 0.00 4.46
375 376 4.717313 GCACAGTTCGGGACCCCC 62.717 72.222 4.46 0.00 41.09 5.40
376 377 2.928396 CACAGTTCGGGACCCCCT 60.928 66.667 4.46 0.00 42.67 4.79
377 378 1.611261 CACAGTTCGGGACCCCCTA 60.611 63.158 4.46 0.00 42.67 3.53
378 379 1.611556 ACAGTTCGGGACCCCCTAC 60.612 63.158 4.46 0.29 42.67 3.18
379 380 2.040114 AGTTCGGGACCCCCTACC 59.960 66.667 4.46 0.00 42.67 3.18
380 381 3.085947 GTTCGGGACCCCCTACCC 61.086 72.222 4.46 0.00 42.67 3.69
384 385 3.759101 GGGACCCCCTACCCGAGA 61.759 72.222 0.00 0.00 41.34 4.04
385 386 2.613421 GGACCCCCTACCCGAGAT 59.387 66.667 0.00 0.00 0.00 2.75
386 387 1.533513 GGACCCCCTACCCGAGATC 60.534 68.421 0.00 0.00 0.00 2.75
387 388 1.533513 GACCCCCTACCCGAGATCC 60.534 68.421 0.00 0.00 0.00 3.36
388 389 2.600769 CCCCCTACCCGAGATCCG 60.601 72.222 0.00 0.00 38.18 4.18
389 390 3.303928 CCCCTACCCGAGATCCGC 61.304 72.222 0.00 0.00 36.84 5.54
390 391 3.303928 CCCTACCCGAGATCCGCC 61.304 72.222 0.00 0.00 36.84 6.13
391 392 3.671411 CCTACCCGAGATCCGCCG 61.671 72.222 0.00 0.00 36.84 6.46
392 393 3.671411 CTACCCGAGATCCGCCGG 61.671 72.222 0.00 0.00 44.94 6.13
393 394 4.511246 TACCCGAGATCCGCCGGT 62.511 66.667 1.63 11.60 43.93 5.28
395 396 4.157120 CCCGAGATCCGCCGGTTT 62.157 66.667 1.63 0.00 43.93 3.27
396 397 2.125269 CCGAGATCCGCCGGTTTT 60.125 61.111 1.63 0.00 40.78 2.43
397 398 2.461110 CCGAGATCCGCCGGTTTTG 61.461 63.158 1.63 0.00 40.78 2.44
398 399 1.447140 CGAGATCCGCCGGTTTTGA 60.447 57.895 1.63 0.00 0.00 2.69
399 400 1.693083 CGAGATCCGCCGGTTTTGAC 61.693 60.000 1.63 0.00 0.00 3.18
400 401 0.672401 GAGATCCGCCGGTTTTGACA 60.672 55.000 1.63 0.00 0.00 3.58
401 402 0.953960 AGATCCGCCGGTTTTGACAC 60.954 55.000 1.63 0.00 0.00 3.67
402 403 1.918868 GATCCGCCGGTTTTGACACC 61.919 60.000 1.63 0.00 0.00 4.16
409 410 1.652563 GGTTTTGACACCGACAGCC 59.347 57.895 0.00 0.00 0.00 4.85
410 411 1.278637 GTTTTGACACCGACAGCCG 59.721 57.895 0.00 0.00 38.18 5.52
411 412 2.539338 TTTTGACACCGACAGCCGC 61.539 57.895 0.00 0.00 36.84 6.53
412 413 4.980805 TTGACACCGACAGCCGCC 62.981 66.667 0.00 0.00 36.84 6.13
445 446 3.072468 CCGTCGGAGCCCACCTTA 61.072 66.667 4.91 0.00 0.00 2.69
446 447 2.494918 CGTCGGAGCCCACCTTAG 59.505 66.667 0.00 0.00 0.00 2.18
447 448 2.187163 GTCGGAGCCCACCTTAGC 59.813 66.667 0.00 0.00 0.00 3.09
448 449 2.284331 TCGGAGCCCACCTTAGCA 60.284 61.111 0.00 0.00 0.00 3.49
449 450 2.125106 CGGAGCCCACCTTAGCAC 60.125 66.667 0.00 0.00 0.00 4.40
450 451 2.272471 GGAGCCCACCTTAGCACC 59.728 66.667 0.00 0.00 32.54 5.01
451 452 2.602676 GGAGCCCACCTTAGCACCA 61.603 63.158 0.00 0.00 39.30 4.17
452 453 1.078143 GAGCCCACCTTAGCACCAG 60.078 63.158 0.00 0.00 0.00 4.00
453 454 2.751837 GCCCACCTTAGCACCAGC 60.752 66.667 0.00 0.00 42.56 4.85
480 481 2.496341 TCGCAGAGAATCCAGCCG 59.504 61.111 0.00 0.00 33.63 5.52
481 482 2.052104 TCGCAGAGAATCCAGCCGA 61.052 57.895 0.00 0.00 33.63 5.54
482 483 1.591059 CGCAGAGAATCCAGCCGAG 60.591 63.158 0.00 0.00 33.63 4.63
483 484 1.819229 GCAGAGAATCCAGCCGAGA 59.181 57.895 0.00 0.00 33.66 4.04
484 485 0.176680 GCAGAGAATCCAGCCGAGAA 59.823 55.000 0.00 0.00 33.66 2.87
485 486 1.406069 GCAGAGAATCCAGCCGAGAAA 60.406 52.381 0.00 0.00 33.66 2.52
486 487 2.275318 CAGAGAATCCAGCCGAGAAAC 58.725 52.381 0.00 0.00 33.66 2.78
487 488 1.208293 AGAGAATCCAGCCGAGAAACC 59.792 52.381 0.00 0.00 33.66 3.27
488 489 0.253327 AGAATCCAGCCGAGAAACCC 59.747 55.000 0.00 0.00 0.00 4.11
489 490 0.253327 GAATCCAGCCGAGAAACCCT 59.747 55.000 0.00 0.00 0.00 4.34
490 491 0.253327 AATCCAGCCGAGAAACCCTC 59.747 55.000 0.00 0.00 38.55 4.30
506 507 2.595655 TCGGGAGAGAGATGGCGA 59.404 61.111 0.00 0.00 0.00 5.54
507 508 1.527148 TCGGGAGAGAGATGGCGAG 60.527 63.158 0.00 0.00 0.00 5.03
508 509 2.733945 GGGAGAGAGATGGCGAGC 59.266 66.667 0.00 0.00 0.00 5.03
509 510 2.733945 GGAGAGAGATGGCGAGCC 59.266 66.667 7.26 7.26 0.00 4.70
588 589 4.504916 CAGCGGCGAGACAGGAGG 62.505 72.222 12.98 0.00 0.00 4.30
593 594 4.154347 GCGAGACAGGAGGGGCTG 62.154 72.222 0.00 0.00 0.00 4.85
594 595 3.465403 CGAGACAGGAGGGGCTGG 61.465 72.222 0.00 0.00 0.00 4.85
595 596 3.086600 GAGACAGGAGGGGCTGGG 61.087 72.222 0.00 0.00 0.00 4.45
596 597 4.748798 AGACAGGAGGGGCTGGGG 62.749 72.222 0.00 0.00 0.00 4.96
597 598 4.741239 GACAGGAGGGGCTGGGGA 62.741 72.222 0.00 0.00 0.00 4.81
598 599 4.285790 ACAGGAGGGGCTGGGGAA 62.286 66.667 0.00 0.00 0.00 3.97
599 600 3.415087 CAGGAGGGGCTGGGGAAG 61.415 72.222 0.00 0.00 0.00 3.46
600 601 3.626596 AGGAGGGGCTGGGGAAGA 61.627 66.667 0.00 0.00 0.00 2.87
601 602 3.412408 GGAGGGGCTGGGGAAGAC 61.412 72.222 0.00 0.00 0.00 3.01
602 603 3.787001 GAGGGGCTGGGGAAGACG 61.787 72.222 0.00 0.00 32.90 4.18
603 604 4.332543 AGGGGCTGGGGAAGACGA 62.333 66.667 0.00 0.00 32.90 4.20
604 605 4.097361 GGGGCTGGGGAAGACGAC 62.097 72.222 0.00 0.00 32.90 4.34
605 606 3.003763 GGGCTGGGGAAGACGACT 61.004 66.667 0.00 0.00 32.90 4.18
606 607 2.266055 GGCTGGGGAAGACGACTG 59.734 66.667 0.00 0.00 0.00 3.51
607 608 2.266055 GCTGGGGAAGACGACTGG 59.734 66.667 0.00 0.00 0.00 4.00
608 609 2.982130 CTGGGGAAGACGACTGGG 59.018 66.667 0.00 0.00 0.00 4.45
609 610 2.606519 TGGGGAAGACGACTGGGG 60.607 66.667 0.00 0.00 0.00 4.96
610 611 4.097361 GGGGAAGACGACTGGGGC 62.097 72.222 0.00 0.00 0.00 5.80
611 612 4.452733 GGGAAGACGACTGGGGCG 62.453 72.222 0.00 0.00 0.00 6.13
612 613 4.452733 GGAAGACGACTGGGGCGG 62.453 72.222 0.00 0.00 0.00 6.13
630 631 4.996434 CGCGATGGATGGCCTCCC 62.996 72.222 15.98 11.83 44.23 4.30
631 632 4.996434 GCGATGGATGGCCTCCCG 62.996 72.222 15.98 13.99 44.23 5.14
632 633 3.550431 CGATGGATGGCCTCCCGT 61.550 66.667 15.98 12.37 44.23 5.28
633 634 2.111878 GATGGATGGCCTCCCGTG 59.888 66.667 15.98 0.00 44.23 4.94
634 635 2.692368 ATGGATGGCCTCCCGTGT 60.692 61.111 15.98 1.07 44.23 4.49
635 636 2.666596 GATGGATGGCCTCCCGTGTC 62.667 65.000 15.98 7.93 44.23 3.67
636 637 4.530857 GGATGGCCTCCCGTGTCG 62.531 72.222 3.32 0.00 38.19 4.35
664 665 4.636435 CACGGGGGCGTTCCACTT 62.636 66.667 0.00 0.00 36.57 3.16
665 666 3.881104 ACGGGGGCGTTCCACTTT 61.881 61.111 0.00 0.00 36.57 2.66
666 667 2.596338 CGGGGGCGTTCCACTTTT 60.596 61.111 0.00 0.00 36.57 2.27
667 668 2.622962 CGGGGGCGTTCCACTTTTC 61.623 63.158 0.00 0.00 36.57 2.29
668 669 1.529713 GGGGGCGTTCCACTTTTCA 60.530 57.895 0.00 0.00 35.56 2.69
669 670 1.658114 GGGGCGTTCCACTTTTCAC 59.342 57.895 0.00 0.00 37.22 3.18
670 671 1.658114 GGGCGTTCCACTTTTCACC 59.342 57.895 0.00 0.00 35.00 4.02
709 710 9.801873 CTTGACAGAATTTCTTTGTTTTTCCTA 57.198 29.630 0.00 0.00 0.00 2.94
736 737 2.473609 TCGAACACTTTTCCATCGAACG 59.526 45.455 0.00 0.00 39.33 3.95
796 798 6.331369 TGAACACTCTTCCATCAAAATTCC 57.669 37.500 0.00 0.00 0.00 3.01
798 800 7.230747 TGAACACTCTTCCATCAAAATTCCTA 58.769 34.615 0.00 0.00 0.00 2.94
803 805 9.050601 CACTCTTCCATCAAAATTCCTATAGTC 57.949 37.037 0.00 0.00 0.00 2.59
832 834 5.854010 TCTTACACAGGACATGATACTCC 57.146 43.478 0.00 0.00 0.00 3.85
1076 1085 2.049985 GAGTCGCACTCGCACACT 60.050 61.111 1.40 0.00 35.28 3.55
1078 1087 3.106407 GTCGCACTCGCACACTCC 61.106 66.667 0.00 0.00 38.40 3.85
1079 1088 3.601685 TCGCACTCGCACACTCCA 61.602 61.111 0.00 0.00 38.40 3.86
1081 1090 2.280119 GCACTCGCACACTCCACA 60.280 61.111 0.00 0.00 38.36 4.17
1082 1091 2.598632 GCACTCGCACACTCCACAC 61.599 63.158 0.00 0.00 38.36 3.82
1083 1092 1.227234 CACTCGCACACTCCACACA 60.227 57.895 0.00 0.00 0.00 3.72
1091 1100 0.739462 ACACTCCACACACACACACG 60.739 55.000 0.00 0.00 0.00 4.49
1093 1102 2.870341 CTCCACACACACACACGCG 61.870 63.158 3.53 3.53 0.00 6.01
1095 1104 4.918060 CACACACACACACGCGCG 62.918 66.667 30.96 30.96 0.00 6.86
1689 1726 2.723746 CACCAGCAACACCAGCAC 59.276 61.111 0.00 0.00 0.00 4.40
1690 1727 2.519302 ACCAGCAACACCAGCACC 60.519 61.111 0.00 0.00 0.00 5.01
1691 1728 2.519063 CCAGCAACACCAGCACCA 60.519 61.111 0.00 0.00 0.00 4.17
2166 2206 1.372623 GTCAACACCTCCGTCGTCC 60.373 63.158 0.00 0.00 0.00 4.79
2322 2362 0.319900 ACAGCAGCAACTACCTGTCG 60.320 55.000 0.00 0.00 33.57 4.35
2722 2762 2.202566 GGCTTTGTACATCCGAGTAGC 58.797 52.381 0.00 0.00 0.00 3.58
2871 2924 5.906113 ATTATCGCTTCTATCTCCGTCAT 57.094 39.130 0.00 0.00 0.00 3.06
2946 3005 8.264347 TCTTAGATATTACACATGTGCAAGGAA 58.736 33.333 25.68 12.09 0.00 3.36
3013 3078 1.368641 TGTATGTTGATCGGCACAGC 58.631 50.000 0.00 0.00 0.00 4.40
3057 3122 2.188817 AGCTGGTTTATCCGTTCTCCT 58.811 47.619 0.00 0.00 39.52 3.69
3074 3139 3.664025 CTCTCCGGCCGAATGTGCA 62.664 63.158 30.73 1.40 0.00 4.57
3140 3205 1.646189 GAATGAGTTCTCCGGCAGTC 58.354 55.000 0.00 0.00 0.00 3.51
3309 3374 2.188207 GGGAGAAAGGCCGCTCTC 59.812 66.667 22.42 22.42 37.87 3.20
3567 3651 2.839486 ACTGATGAAACGAAGGCAGA 57.161 45.000 0.00 0.00 0.00 4.26
3568 3652 2.693069 ACTGATGAAACGAAGGCAGAG 58.307 47.619 0.00 0.00 0.00 3.35
3569 3653 2.300152 ACTGATGAAACGAAGGCAGAGA 59.700 45.455 0.00 0.00 0.00 3.10
3570 3654 2.928757 CTGATGAAACGAAGGCAGAGAG 59.071 50.000 0.00 0.00 0.00 3.20
3571 3655 2.562738 TGATGAAACGAAGGCAGAGAGA 59.437 45.455 0.00 0.00 0.00 3.10
3572 3656 2.732412 TGAAACGAAGGCAGAGAGAG 57.268 50.000 0.00 0.00 0.00 3.20
3573 3657 2.239400 TGAAACGAAGGCAGAGAGAGA 58.761 47.619 0.00 0.00 0.00 3.10
3574 3658 2.230025 TGAAACGAAGGCAGAGAGAGAG 59.770 50.000 0.00 0.00 0.00 3.20
3575 3659 2.208132 AACGAAGGCAGAGAGAGAGA 57.792 50.000 0.00 0.00 0.00 3.10
3576 3660 1.750193 ACGAAGGCAGAGAGAGAGAG 58.250 55.000 0.00 0.00 0.00 3.20
3577 3661 1.280710 ACGAAGGCAGAGAGAGAGAGA 59.719 52.381 0.00 0.00 0.00 3.10
3589 3673 6.718912 CAGAGAGAGAGAGAGAGAGAGAGATA 59.281 46.154 0.00 0.00 0.00 1.98
3591 3675 6.619464 AGAGAGAGAGAGAGAGAGAGATACT 58.381 44.000 0.00 0.00 0.00 2.12
3600 3684 8.792830 AGAGAGAGAGAGATACTAGAGGTTTA 57.207 38.462 0.00 0.00 0.00 2.01
3674 4174 7.387265 TGTAGAGGTAGATTGAGAGAGAGAT 57.613 40.000 0.00 0.00 0.00 2.75
3675 4175 7.811282 TGTAGAGGTAGATTGAGAGAGAGATT 58.189 38.462 0.00 0.00 0.00 2.40
3678 4178 4.588528 AGGTAGATTGAGAGAGAGATTGGC 59.411 45.833 0.00 0.00 0.00 4.52
3680 4180 4.405116 AGATTGAGAGAGAGATTGGCAC 57.595 45.455 0.00 0.00 0.00 5.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 8.037758 ACGAAGTCTTCAATCTTGTATCTTCAT 58.962 33.333 12.99 0.00 29.74 2.57
5 6 7.820044 ACGAAGTCTTCAATCTTGTATCTTC 57.180 36.000 12.99 0.00 29.74 2.87
36 37 2.396651 AAAGGAGAGTCCCACCCGGA 62.397 60.000 0.73 0.00 37.19 5.14
37 38 1.918800 AAAGGAGAGTCCCACCCGG 60.919 63.158 0.00 0.00 37.19 5.73
38 39 1.296715 CAAAGGAGAGTCCCACCCG 59.703 63.158 1.17 0.00 37.19 5.28
39 40 1.002011 GCAAAGGAGAGTCCCACCC 60.002 63.158 1.17 0.00 37.19 4.61
40 41 1.376037 CGCAAAGGAGAGTCCCACC 60.376 63.158 1.17 0.00 37.19 4.61
41 42 0.951040 CACGCAAAGGAGAGTCCCAC 60.951 60.000 1.17 0.00 37.19 4.61
42 43 1.371183 CACGCAAAGGAGAGTCCCA 59.629 57.895 1.17 0.00 37.19 4.37
43 44 1.376037 CCACGCAAAGGAGAGTCCC 60.376 63.158 0.00 0.00 37.19 4.46
44 45 0.034896 TTCCACGCAAAGGAGAGTCC 59.965 55.000 0.00 0.00 36.33 3.85
45 46 1.433534 CTTCCACGCAAAGGAGAGTC 58.566 55.000 0.00 0.00 36.33 3.36
46 47 0.035458 CCTTCCACGCAAAGGAGAGT 59.965 55.000 5.37 0.00 45.15 3.24
47 48 1.301677 GCCTTCCACGCAAAGGAGAG 61.302 60.000 13.57 3.40 45.15 3.20
48 49 1.302511 GCCTTCCACGCAAAGGAGA 60.303 57.895 13.57 0.00 45.15 3.71
49 50 1.172180 TTGCCTTCCACGCAAAGGAG 61.172 55.000 13.57 0.00 45.15 3.69
50 51 1.152860 TTGCCTTCCACGCAAAGGA 60.153 52.632 13.57 0.00 45.15 3.36
51 52 1.286880 CTTGCCTTCCACGCAAAGG 59.713 57.895 6.69 6.69 45.11 3.11
52 53 1.372128 GCTTGCCTTCCACGCAAAG 60.372 57.895 0.00 0.00 45.11 2.77
53 54 1.391157 AAGCTTGCCTTCCACGCAAA 61.391 50.000 0.00 0.00 45.11 3.68
54 55 1.827789 AAGCTTGCCTTCCACGCAA 60.828 52.632 0.00 0.00 43.71 4.85
55 56 2.203337 AAGCTTGCCTTCCACGCA 60.203 55.556 0.00 0.00 40.87 5.24
56 57 2.256461 CAAGCTTGCCTTCCACGC 59.744 61.111 14.65 0.00 38.87 5.34
57 58 2.956987 CCAAGCTTGCCTTCCACG 59.043 61.111 21.43 0.62 0.00 4.94
58 59 1.747325 TTGCCAAGCTTGCCTTCCAC 61.747 55.000 21.43 4.32 0.00 4.02
59 60 0.832983 ATTGCCAAGCTTGCCTTCCA 60.833 50.000 21.43 9.04 0.00 3.53
60 61 0.322648 AATTGCCAAGCTTGCCTTCC 59.677 50.000 21.43 6.63 0.00 3.46
61 62 1.718396 GAATTGCCAAGCTTGCCTTC 58.282 50.000 21.43 14.81 0.00 3.46
62 63 0.037975 CGAATTGCCAAGCTTGCCTT 60.038 50.000 21.43 10.35 0.00 4.35
63 64 1.588082 CGAATTGCCAAGCTTGCCT 59.412 52.632 21.43 2.43 0.00 4.75
64 65 1.446618 CCGAATTGCCAAGCTTGCC 60.447 57.895 21.43 11.17 0.00 4.52
65 66 0.174162 ATCCGAATTGCCAAGCTTGC 59.826 50.000 21.43 16.17 0.00 4.01
66 67 3.067180 ACATATCCGAATTGCCAAGCTTG 59.933 43.478 19.93 19.93 0.00 4.01
67 68 3.290710 ACATATCCGAATTGCCAAGCTT 58.709 40.909 0.00 0.00 0.00 3.74
68 69 2.936202 ACATATCCGAATTGCCAAGCT 58.064 42.857 0.00 0.00 0.00 3.74
69 70 4.065088 TCTACATATCCGAATTGCCAAGC 58.935 43.478 0.00 0.00 0.00 4.01
70 71 6.169094 AGATCTACATATCCGAATTGCCAAG 58.831 40.000 0.00 0.00 0.00 3.61
71 72 6.114187 AGATCTACATATCCGAATTGCCAA 57.886 37.500 0.00 0.00 0.00 4.52
72 73 5.337571 GGAGATCTACATATCCGAATTGCCA 60.338 44.000 0.00 0.00 30.60 4.92
73 74 5.105146 AGGAGATCTACATATCCGAATTGCC 60.105 44.000 7.93 0.00 44.22 4.52
74 75 5.971763 AGGAGATCTACATATCCGAATTGC 58.028 41.667 7.93 0.00 44.22 3.56
75 76 7.038659 GGAAGGAGATCTACATATCCGAATTG 58.961 42.308 7.93 0.00 44.22 2.32
76 77 6.957020 AGGAAGGAGATCTACATATCCGAATT 59.043 38.462 7.93 0.00 44.22 2.17
77 78 6.498538 AGGAAGGAGATCTACATATCCGAAT 58.501 40.000 7.93 0.00 44.22 3.34
78 79 5.893500 AGGAAGGAGATCTACATATCCGAA 58.106 41.667 7.93 0.00 44.22 4.30
79 80 5.522315 AGGAAGGAGATCTACATATCCGA 57.478 43.478 7.93 0.00 44.22 4.55
80 81 5.478679 ACAAGGAAGGAGATCTACATATCCG 59.521 44.000 7.93 3.31 44.22 4.18
81 82 6.926630 ACAAGGAAGGAGATCTACATATCC 57.073 41.667 7.93 11.56 40.35 2.59
82 83 8.308207 GGTTACAAGGAAGGAGATCTACATATC 58.692 40.741 7.93 2.34 0.00 1.63
83 84 7.039644 CGGTTACAAGGAAGGAGATCTACATAT 60.040 40.741 7.93 0.00 0.00 1.78
84 85 6.264744 CGGTTACAAGGAAGGAGATCTACATA 59.735 42.308 7.93 0.00 0.00 2.29
85 86 5.069251 CGGTTACAAGGAAGGAGATCTACAT 59.931 44.000 7.93 0.00 0.00 2.29
86 87 4.401519 CGGTTACAAGGAAGGAGATCTACA 59.598 45.833 7.93 0.00 0.00 2.74
87 88 4.643784 TCGGTTACAAGGAAGGAGATCTAC 59.356 45.833 0.00 0.00 0.00 2.59
88 89 4.643784 GTCGGTTACAAGGAAGGAGATCTA 59.356 45.833 0.00 0.00 0.00 1.98
89 90 3.447944 GTCGGTTACAAGGAAGGAGATCT 59.552 47.826 0.00 0.00 0.00 2.75
90 91 3.447944 AGTCGGTTACAAGGAAGGAGATC 59.552 47.826 0.00 0.00 0.00 2.75
91 92 3.442076 AGTCGGTTACAAGGAAGGAGAT 58.558 45.455 0.00 0.00 0.00 2.75
92 93 2.824341 GAGTCGGTTACAAGGAAGGAGA 59.176 50.000 0.00 0.00 0.00 3.71
93 94 2.826725 AGAGTCGGTTACAAGGAAGGAG 59.173 50.000 0.00 0.00 0.00 3.69
94 95 2.561419 CAGAGTCGGTTACAAGGAAGGA 59.439 50.000 0.00 0.00 0.00 3.36
95 96 2.299297 ACAGAGTCGGTTACAAGGAAGG 59.701 50.000 0.00 0.00 0.00 3.46
96 97 3.243771 ACACAGAGTCGGTTACAAGGAAG 60.244 47.826 0.00 0.00 0.00 3.46
97 98 2.696707 ACACAGAGTCGGTTACAAGGAA 59.303 45.455 0.00 0.00 0.00 3.36
98 99 2.313317 ACACAGAGTCGGTTACAAGGA 58.687 47.619 0.00 0.00 0.00 3.36
99 100 2.814280 ACACAGAGTCGGTTACAAGG 57.186 50.000 0.00 0.00 0.00 3.61
100 101 3.985925 GGTTACACAGAGTCGGTTACAAG 59.014 47.826 0.00 0.00 0.00 3.16
101 102 3.243839 GGGTTACACAGAGTCGGTTACAA 60.244 47.826 0.00 0.00 0.00 2.41
102 103 2.297033 GGGTTACACAGAGTCGGTTACA 59.703 50.000 0.00 0.00 0.00 2.41
103 104 2.560105 AGGGTTACACAGAGTCGGTTAC 59.440 50.000 0.00 0.00 0.00 2.50
104 105 2.880443 AGGGTTACACAGAGTCGGTTA 58.120 47.619 0.00 0.00 0.00 2.85
105 106 1.713297 AGGGTTACACAGAGTCGGTT 58.287 50.000 0.00 0.00 0.00 4.44
106 107 2.444421 CTAGGGTTACACAGAGTCGGT 58.556 52.381 0.00 0.00 0.00 4.69
107 108 1.134560 GCTAGGGTTACACAGAGTCGG 59.865 57.143 0.00 0.00 0.00 4.79
108 109 1.134560 GGCTAGGGTTACACAGAGTCG 59.865 57.143 0.00 0.00 0.00 4.18
109 110 1.481363 GGGCTAGGGTTACACAGAGTC 59.519 57.143 0.00 0.00 0.00 3.36
110 111 1.569653 GGGCTAGGGTTACACAGAGT 58.430 55.000 0.00 0.00 0.00 3.24
111 112 0.831307 GGGGCTAGGGTTACACAGAG 59.169 60.000 0.00 0.00 0.00 3.35
112 113 0.619543 GGGGGCTAGGGTTACACAGA 60.620 60.000 0.00 0.00 0.00 3.41
113 114 0.620700 AGGGGGCTAGGGTTACACAG 60.621 60.000 0.00 0.00 0.00 3.66
114 115 0.619543 GAGGGGGCTAGGGTTACACA 60.620 60.000 0.00 0.00 0.00 3.72
115 116 1.343431 GGAGGGGGCTAGGGTTACAC 61.343 65.000 0.00 0.00 0.00 2.90
116 117 1.003835 GGAGGGGGCTAGGGTTACA 59.996 63.158 0.00 0.00 0.00 2.41
117 118 2.138831 CGGAGGGGGCTAGGGTTAC 61.139 68.421 0.00 0.00 0.00 2.50
118 119 2.284493 CGGAGGGGGCTAGGGTTA 59.716 66.667 0.00 0.00 0.00 2.85
131 132 2.955614 CGGTTTATATAGGCACCGGAG 58.044 52.381 9.46 0.00 46.92 4.63
135 136 2.027469 CCCTCCGGTTTATATAGGCACC 60.027 54.545 0.00 0.00 0.00 5.01
136 137 2.636403 ACCCTCCGGTTTATATAGGCAC 59.364 50.000 0.00 0.00 40.58 5.01
137 138 2.635915 CACCCTCCGGTTTATATAGGCA 59.364 50.000 0.00 0.00 42.04 4.75
138 139 2.636403 ACACCCTCCGGTTTATATAGGC 59.364 50.000 0.00 0.00 42.04 3.93
139 140 5.082425 ACTACACCCTCCGGTTTATATAGG 58.918 45.833 0.00 0.00 42.04 2.57
140 141 5.184671 GGACTACACCCTCCGGTTTATATAG 59.815 48.000 0.00 1.20 42.04 1.31
141 142 5.079643 GGACTACACCCTCCGGTTTATATA 58.920 45.833 0.00 0.00 42.04 0.86
142 143 3.899980 GGACTACACCCTCCGGTTTATAT 59.100 47.826 0.00 0.00 42.04 0.86
143 144 3.299503 GGACTACACCCTCCGGTTTATA 58.700 50.000 0.00 0.00 42.04 0.98
144 145 2.113807 GGACTACACCCTCCGGTTTAT 58.886 52.381 0.00 0.00 42.04 1.40
145 146 1.560505 GGACTACACCCTCCGGTTTA 58.439 55.000 0.00 0.00 42.04 2.01
146 147 1.538687 CGGACTACACCCTCCGGTTT 61.539 60.000 0.00 0.00 44.84 3.27
147 148 1.980772 CGGACTACACCCTCCGGTT 60.981 63.158 0.00 0.00 44.84 4.44
148 149 2.362120 CGGACTACACCCTCCGGT 60.362 66.667 0.00 0.00 44.84 5.28
151 152 0.257039 TCCTACGGACTACACCCTCC 59.743 60.000 0.00 0.00 0.00 4.30
152 153 3.890527 TCCTACGGACTACACCCTC 57.109 57.895 0.00 0.00 0.00 4.30
162 163 3.755112 TGATTGTTGTTGTCCTACGGA 57.245 42.857 0.00 0.00 0.00 4.69
163 164 6.315144 TGATTATGATTGTTGTTGTCCTACGG 59.685 38.462 0.00 0.00 0.00 4.02
164 165 7.302350 TGATTATGATTGTTGTTGTCCTACG 57.698 36.000 0.00 0.00 0.00 3.51
166 167 9.559732 CCTATGATTATGATTGTTGTTGTCCTA 57.440 33.333 0.00 0.00 0.00 2.94
167 168 7.013655 GCCTATGATTATGATTGTTGTTGTCCT 59.986 37.037 0.00 0.00 0.00 3.85
168 169 7.013655 AGCCTATGATTATGATTGTTGTTGTCC 59.986 37.037 0.00 0.00 0.00 4.02
169 170 7.934457 AGCCTATGATTATGATTGTTGTTGTC 58.066 34.615 0.00 0.00 0.00 3.18
170 171 7.886629 AGCCTATGATTATGATTGTTGTTGT 57.113 32.000 0.00 0.00 0.00 3.32
171 172 8.019669 GCTAGCCTATGATTATGATTGTTGTTG 58.980 37.037 2.29 0.00 0.00 3.33
172 173 7.941238 AGCTAGCCTATGATTATGATTGTTGTT 59.059 33.333 12.13 0.00 0.00 2.83
173 174 7.456725 AGCTAGCCTATGATTATGATTGTTGT 58.543 34.615 12.13 0.00 0.00 3.32
174 175 7.918536 AGCTAGCCTATGATTATGATTGTTG 57.081 36.000 12.13 0.00 0.00 3.33
175 176 8.381636 AGAAGCTAGCCTATGATTATGATTGTT 58.618 33.333 12.13 0.00 0.00 2.83
176 177 7.915930 AGAAGCTAGCCTATGATTATGATTGT 58.084 34.615 12.13 0.00 0.00 2.71
179 180 8.649591 CCATAGAAGCTAGCCTATGATTATGAT 58.350 37.037 28.57 1.34 42.84 2.45
180 181 7.621285 ACCATAGAAGCTAGCCTATGATTATGA 59.379 37.037 28.57 3.67 42.84 2.15
181 182 7.790027 ACCATAGAAGCTAGCCTATGATTATG 58.210 38.462 28.57 19.05 42.84 1.90
182 183 7.986553 ACCATAGAAGCTAGCCTATGATTAT 57.013 36.000 28.57 15.69 42.84 1.28
183 184 7.798710 AACCATAGAAGCTAGCCTATGATTA 57.201 36.000 28.57 9.65 42.84 1.75
184 185 6.694445 AACCATAGAAGCTAGCCTATGATT 57.306 37.500 28.57 21.17 42.84 2.57
185 186 6.694445 AAACCATAGAAGCTAGCCTATGAT 57.306 37.500 28.57 17.67 42.84 2.45
186 187 6.295349 GCTAAACCATAGAAGCTAGCCTATGA 60.295 42.308 28.57 15.70 42.84 2.15
187 188 5.872070 GCTAAACCATAGAAGCTAGCCTATG 59.128 44.000 23.70 23.70 40.97 2.23
188 189 5.046231 GGCTAAACCATAGAAGCTAGCCTAT 60.046 44.000 12.13 9.32 45.22 2.57
189 190 4.283722 GGCTAAACCATAGAAGCTAGCCTA 59.716 45.833 12.13 7.15 45.22 3.93
190 191 3.071747 GGCTAAACCATAGAAGCTAGCCT 59.928 47.826 12.13 4.79 45.22 4.58
191 192 3.403968 GGCTAAACCATAGAAGCTAGCC 58.596 50.000 12.13 1.31 43.27 3.93
192 193 4.039852 AGAGGCTAAACCATAGAAGCTAGC 59.960 45.833 6.62 6.62 43.14 3.42
193 194 5.799827 AGAGGCTAAACCATAGAAGCTAG 57.200 43.478 0.00 0.00 43.14 3.42
194 195 5.241064 CGTAGAGGCTAAACCATAGAAGCTA 59.759 44.000 0.00 0.00 43.14 3.32
195 196 4.038162 CGTAGAGGCTAAACCATAGAAGCT 59.962 45.833 0.00 0.00 43.14 3.74
196 197 4.037684 TCGTAGAGGCTAAACCATAGAAGC 59.962 45.833 0.00 0.00 43.14 3.86
197 198 5.769484 TCGTAGAGGCTAAACCATAGAAG 57.231 43.478 0.00 0.00 43.14 2.85
198 199 6.069331 AGATCGTAGAGGCTAAACCATAGAA 58.931 40.000 0.00 0.00 43.63 2.10
199 200 5.632118 AGATCGTAGAGGCTAAACCATAGA 58.368 41.667 0.00 0.00 43.63 1.98
200 201 5.391097 CGAGATCGTAGAGGCTAAACCATAG 60.391 48.000 0.00 0.00 43.63 2.23
201 202 4.454847 CGAGATCGTAGAGGCTAAACCATA 59.545 45.833 0.00 0.00 43.63 2.74
202 203 3.253677 CGAGATCGTAGAGGCTAAACCAT 59.746 47.826 0.00 0.00 43.63 3.55
203 204 2.617308 CGAGATCGTAGAGGCTAAACCA 59.383 50.000 0.00 0.00 43.63 3.67
204 205 3.270962 CGAGATCGTAGAGGCTAAACC 57.729 52.381 0.00 0.00 43.63 3.27
219 220 4.707448 ACAAGAGTTGATCTACCACGAGAT 59.293 41.667 3.54 0.00 37.23 2.75
220 221 4.079970 ACAAGAGTTGATCTACCACGAGA 58.920 43.478 3.54 0.00 37.23 4.04
221 222 4.442375 ACAAGAGTTGATCTACCACGAG 57.558 45.455 3.54 1.07 37.23 4.18
222 223 5.970317 TTACAAGAGTTGATCTACCACGA 57.030 39.130 3.54 0.00 37.23 4.35
223 224 7.481642 AGTATTACAAGAGTTGATCTACCACG 58.518 38.462 3.54 0.00 37.23 4.94
224 225 8.467598 TGAGTATTACAAGAGTTGATCTACCAC 58.532 37.037 3.54 0.00 37.23 4.16
225 226 8.589701 TGAGTATTACAAGAGTTGATCTACCA 57.410 34.615 3.54 0.00 37.23 3.25
248 249 9.939802 CCTACTTGATTGATCTTGATGATATGA 57.060 33.333 0.00 0.00 35.14 2.15
249 250 9.939802 TCCTACTTGATTGATCTTGATGATATG 57.060 33.333 0.00 0.00 35.14 1.78
251 252 9.993454 CTTCCTACTTGATTGATCTTGATGATA 57.007 33.333 0.00 0.00 35.14 2.15
252 253 8.492782 ACTTCCTACTTGATTGATCTTGATGAT 58.507 33.333 0.00 0.00 38.27 2.45
253 254 7.855375 ACTTCCTACTTGATTGATCTTGATGA 58.145 34.615 0.00 0.00 0.00 2.92
254 255 9.775854 ATACTTCCTACTTGATTGATCTTGATG 57.224 33.333 0.00 0.00 0.00 3.07
255 256 9.775854 CATACTTCCTACTTGATTGATCTTGAT 57.224 33.333 0.00 0.00 0.00 2.57
256 257 8.206867 CCATACTTCCTACTTGATTGATCTTGA 58.793 37.037 0.00 0.00 0.00 3.02
257 258 7.989741 ACCATACTTCCTACTTGATTGATCTTG 59.010 37.037 0.00 0.00 0.00 3.02
258 259 8.095452 ACCATACTTCCTACTTGATTGATCTT 57.905 34.615 0.00 0.00 0.00 2.40
259 260 7.682787 ACCATACTTCCTACTTGATTGATCT 57.317 36.000 0.00 0.00 0.00 2.75
263 264 9.490379 GGTAATACCATACTTCCTACTTGATTG 57.510 37.037 4.24 0.00 38.42 2.67
264 265 9.448587 AGGTAATACCATACTTCCTACTTGATT 57.551 33.333 12.54 0.00 41.95 2.57
265 266 9.091220 GAGGTAATACCATACTTCCTACTTGAT 57.909 37.037 12.54 0.00 41.95 2.57
266 267 7.508296 GGAGGTAATACCATACTTCCTACTTGA 59.492 40.741 12.54 0.00 44.47 3.02
267 268 7.289317 TGGAGGTAATACCATACTTCCTACTTG 59.711 40.741 12.54 0.00 46.69 3.16
268 269 7.367828 TGGAGGTAATACCATACTTCCTACTT 58.632 38.462 12.54 0.00 46.69 2.24
269 270 6.930475 TGGAGGTAATACCATACTTCCTACT 58.070 40.000 12.54 0.00 46.69 2.57
270 271 7.362747 CGATGGAGGTAATACCATACTTCCTAC 60.363 44.444 12.54 6.84 46.69 3.18
271 272 6.662234 CGATGGAGGTAATACCATACTTCCTA 59.338 42.308 12.54 1.69 46.69 2.94
272 273 5.480772 CGATGGAGGTAATACCATACTTCCT 59.519 44.000 12.54 0.29 46.69 3.36
273 274 5.479375 TCGATGGAGGTAATACCATACTTCC 59.521 44.000 12.54 9.68 46.72 3.46
274 275 6.433404 TCTCGATGGAGGTAATACCATACTTC 59.567 42.308 12.54 7.75 45.41 3.01
275 276 6.312529 TCTCGATGGAGGTAATACCATACTT 58.687 40.000 12.54 0.00 45.41 2.24
276 277 5.888901 TCTCGATGGAGGTAATACCATACT 58.111 41.667 12.54 0.00 45.41 2.12
277 278 5.125739 CCTCTCGATGGAGGTAATACCATAC 59.874 48.000 12.54 1.88 45.41 2.39
278 279 5.262009 CCTCTCGATGGAGGTAATACCATA 58.738 45.833 12.54 0.00 45.41 2.74
280 281 3.497332 CCTCTCGATGGAGGTAATACCA 58.503 50.000 12.54 0.00 45.65 3.25
289 290 3.610669 CGGGCCCTCTCGATGGAG 61.611 72.222 22.43 0.00 41.89 3.86
290 291 3.672338 TTCGGGCCCTCTCGATGGA 62.672 63.158 22.43 3.53 35.25 3.41
291 292 3.154473 TTCGGGCCCTCTCGATGG 61.154 66.667 22.43 0.54 35.25 3.51
292 293 2.107141 GTTCGGGCCCTCTCGATG 59.893 66.667 22.43 1.43 35.25 3.84
293 294 3.155167 GGTTCGGGCCCTCTCGAT 61.155 66.667 22.43 0.00 35.25 3.59
294 295 4.377760 AGGTTCGGGCCCTCTCGA 62.378 66.667 22.43 9.26 0.00 4.04
295 296 4.148825 CAGGTTCGGGCCCTCTCG 62.149 72.222 22.43 6.49 0.00 4.04
296 297 3.787001 CCAGGTTCGGGCCCTCTC 61.787 72.222 22.43 9.34 0.00 3.20
304 305 2.510613 ACAATGTTTACCCAGGTTCGG 58.489 47.619 0.00 0.00 0.00 4.30
305 306 4.542735 GAAACAATGTTTACCCAGGTTCG 58.457 43.478 11.71 0.00 0.00 3.95
306 307 4.262292 GGGAAACAATGTTTACCCAGGTTC 60.262 45.833 25.84 4.67 37.50 3.62
307 308 3.644265 GGGAAACAATGTTTACCCAGGTT 59.356 43.478 25.84 0.00 37.50 3.50
308 309 3.236047 GGGAAACAATGTTTACCCAGGT 58.764 45.455 25.84 0.00 37.50 4.00
309 310 3.953712 GGGAAACAATGTTTACCCAGG 57.046 47.619 25.84 0.00 37.50 4.45
313 314 1.067425 GCGGGGGAAACAATGTTTACC 60.067 52.381 27.65 27.65 0.00 2.85
314 315 1.067425 GGCGGGGGAAACAATGTTTAC 60.067 52.381 12.46 12.46 0.00 2.01
315 316 1.203075 AGGCGGGGGAAACAATGTTTA 60.203 47.619 11.71 0.00 0.00 2.01
316 317 0.471022 AGGCGGGGGAAACAATGTTT 60.471 50.000 11.55 11.55 0.00 2.83
317 318 0.898326 GAGGCGGGGGAAACAATGTT 60.898 55.000 0.00 0.00 0.00 2.71
318 319 1.304134 GAGGCGGGGGAAACAATGT 60.304 57.895 0.00 0.00 0.00 2.71
319 320 2.052104 GGAGGCGGGGGAAACAATG 61.052 63.158 0.00 0.00 0.00 2.82
320 321 2.238701 AGGAGGCGGGGGAAACAAT 61.239 57.895 0.00 0.00 0.00 2.71
321 322 2.856988 AGGAGGCGGGGGAAACAA 60.857 61.111 0.00 0.00 0.00 2.83
322 323 3.646715 CAGGAGGCGGGGGAAACA 61.647 66.667 0.00 0.00 0.00 2.83
323 324 1.844544 TAACAGGAGGCGGGGGAAAC 61.845 60.000 0.00 0.00 0.00 2.78
324 325 1.539372 TAACAGGAGGCGGGGGAAA 60.539 57.895 0.00 0.00 0.00 3.13
325 326 2.123180 TAACAGGAGGCGGGGGAA 59.877 61.111 0.00 0.00 0.00 3.97
326 327 2.686106 GTAACAGGAGGCGGGGGA 60.686 66.667 0.00 0.00 0.00 4.81
327 328 3.793888 GGTAACAGGAGGCGGGGG 61.794 72.222 0.00 0.00 0.00 5.40
328 329 3.006728 TGGTAACAGGAGGCGGGG 61.007 66.667 0.00 0.00 46.17 5.73
339 340 0.031721 CGTCTAGGGCGGATGGTAAC 59.968 60.000 0.00 0.00 0.00 2.50
340 341 1.741327 GCGTCTAGGGCGGATGGTAA 61.741 60.000 9.08 0.00 0.00 2.85
341 342 2.198287 GCGTCTAGGGCGGATGGTA 61.198 63.158 9.08 0.00 0.00 3.25
342 343 3.537874 GCGTCTAGGGCGGATGGT 61.538 66.667 9.08 0.00 0.00 3.55
343 344 3.536917 TGCGTCTAGGGCGGATGG 61.537 66.667 9.08 0.00 0.00 3.51
344 345 2.279517 GTGCGTCTAGGGCGGATG 60.280 66.667 9.08 0.00 31.50 3.51
345 346 2.758327 TGTGCGTCTAGGGCGGAT 60.758 61.111 9.08 0.00 31.50 4.18
346 347 3.449227 CTGTGCGTCTAGGGCGGA 61.449 66.667 9.08 4.21 0.00 5.54
347 348 3.296709 AACTGTGCGTCTAGGGCGG 62.297 63.158 9.08 2.67 0.00 6.13
348 349 1.805945 GAACTGTGCGTCTAGGGCG 60.806 63.158 3.77 3.77 0.00 6.13
349 350 1.805945 CGAACTGTGCGTCTAGGGC 60.806 63.158 0.00 0.00 0.00 5.19
350 351 1.153823 CCGAACTGTGCGTCTAGGG 60.154 63.158 7.51 0.00 0.00 3.53
351 352 1.153823 CCCGAACTGTGCGTCTAGG 60.154 63.158 7.51 0.00 0.00 3.02
352 353 0.456312 GTCCCGAACTGTGCGTCTAG 60.456 60.000 7.51 0.00 0.00 2.43
353 354 1.582968 GTCCCGAACTGTGCGTCTA 59.417 57.895 7.51 0.00 0.00 2.59
354 355 2.338984 GTCCCGAACTGTGCGTCT 59.661 61.111 7.51 0.00 0.00 4.18
355 356 2.737376 GGTCCCGAACTGTGCGTC 60.737 66.667 7.51 0.00 0.00 5.19
356 357 4.309950 GGGTCCCGAACTGTGCGT 62.310 66.667 7.51 0.00 0.00 5.24
358 359 4.717313 GGGGGTCCCGAACTGTGC 62.717 72.222 0.48 0.00 36.85 4.57
367 368 3.097429 ATCTCGGGTAGGGGGTCCC 62.097 68.421 0.00 0.00 45.90 4.46
368 369 1.533513 GATCTCGGGTAGGGGGTCC 60.534 68.421 0.00 0.00 0.00 4.46
369 370 1.533513 GGATCTCGGGTAGGGGGTC 60.534 68.421 0.00 0.00 0.00 4.46
370 371 2.613421 GGATCTCGGGTAGGGGGT 59.387 66.667 0.00 0.00 0.00 4.95
371 372 2.600769 CGGATCTCGGGTAGGGGG 60.601 72.222 0.00 0.00 34.75 5.40
372 373 3.303928 GCGGATCTCGGGTAGGGG 61.304 72.222 5.87 0.00 39.69 4.79
373 374 3.303928 GGCGGATCTCGGGTAGGG 61.304 72.222 5.87 0.00 39.69 3.53
374 375 3.671411 CGGCGGATCTCGGGTAGG 61.671 72.222 0.00 0.00 39.69 3.18
375 376 3.671411 CCGGCGGATCTCGGGTAG 61.671 72.222 24.41 0.00 42.32 3.18
380 381 1.447140 TCAAAACCGGCGGATCTCG 60.447 57.895 35.78 16.34 42.76 4.04
381 382 0.672401 TGTCAAAACCGGCGGATCTC 60.672 55.000 35.78 16.90 0.00 2.75
382 383 0.953960 GTGTCAAAACCGGCGGATCT 60.954 55.000 35.78 13.84 0.00 2.75
383 384 1.500396 GTGTCAAAACCGGCGGATC 59.500 57.895 35.78 9.52 0.00 3.36
384 385 1.969589 GGTGTCAAAACCGGCGGAT 60.970 57.895 35.78 20.37 0.00 4.18
385 386 2.592287 GGTGTCAAAACCGGCGGA 60.592 61.111 35.78 6.54 0.00 5.54
391 392 1.652563 GGCTGTCGGTGTCAAAACC 59.347 57.895 0.00 0.00 36.82 3.27
392 393 1.278637 CGGCTGTCGGTGTCAAAAC 59.721 57.895 0.00 0.00 34.75 2.43
393 394 2.539338 GCGGCTGTCGGTGTCAAAA 61.539 57.895 3.02 0.00 39.69 2.44
394 395 2.970324 GCGGCTGTCGGTGTCAAA 60.970 61.111 3.02 0.00 39.69 2.69
395 396 4.980805 GGCGGCTGTCGGTGTCAA 62.981 66.667 3.02 0.00 39.69 3.18
428 429 3.072468 TAAGGTGGGCTCCGACGG 61.072 66.667 7.84 7.84 0.00 4.79
429 430 2.494918 CTAAGGTGGGCTCCGACG 59.505 66.667 0.00 0.00 0.00 5.12
430 431 2.187163 GCTAAGGTGGGCTCCGAC 59.813 66.667 0.00 0.00 0.00 4.79
431 432 2.284331 TGCTAAGGTGGGCTCCGA 60.284 61.111 0.00 0.00 0.00 4.55
432 433 2.125106 GTGCTAAGGTGGGCTCCG 60.125 66.667 0.00 0.00 0.00 4.63
433 434 2.272471 GGTGCTAAGGTGGGCTCC 59.728 66.667 0.00 0.00 35.47 4.70
434 435 1.078143 CTGGTGCTAAGGTGGGCTC 60.078 63.158 0.00 0.00 0.00 4.70
435 436 3.081554 CTGGTGCTAAGGTGGGCT 58.918 61.111 0.00 0.00 0.00 5.19
436 437 2.751837 GCTGGTGCTAAGGTGGGC 60.752 66.667 0.00 0.00 36.03 5.36
437 438 2.436646 CGCTGGTGCTAAGGTGGG 60.437 66.667 0.00 0.00 36.97 4.61
438 439 3.127533 GCGCTGGTGCTAAGGTGG 61.128 66.667 0.00 0.00 36.97 4.61
439 440 3.127533 GGCGCTGGTGCTAAGGTG 61.128 66.667 7.64 0.00 36.97 4.00
440 441 4.760047 CGGCGCTGGTGCTAAGGT 62.760 66.667 8.83 0.00 36.97 3.50
455 456 3.417275 ATTCTCTGCGAGACGGCGG 62.417 63.158 13.24 0.00 38.51 6.13
456 457 1.941734 GATTCTCTGCGAGACGGCG 60.942 63.158 4.80 4.80 38.51 6.46
457 458 1.590259 GGATTCTCTGCGAGACGGC 60.590 63.158 7.61 0.00 38.51 5.68
458 459 0.248825 CTGGATTCTCTGCGAGACGG 60.249 60.000 7.61 0.22 38.51 4.79
459 460 0.869454 GCTGGATTCTCTGCGAGACG 60.869 60.000 7.61 0.00 38.51 4.18
460 461 0.529555 GGCTGGATTCTCTGCGAGAC 60.530 60.000 7.61 0.00 38.51 3.36
461 462 1.819229 GGCTGGATTCTCTGCGAGA 59.181 57.895 4.47 4.47 36.86 4.04
462 463 1.591059 CGGCTGGATTCTCTGCGAG 60.591 63.158 0.00 0.00 33.27 5.03
463 464 2.009424 CTCGGCTGGATTCTCTGCGA 62.009 60.000 0.00 0.00 33.27 5.10
464 465 1.591059 CTCGGCTGGATTCTCTGCG 60.591 63.158 0.00 0.00 33.27 5.18
465 466 0.176680 TTCTCGGCTGGATTCTCTGC 59.823 55.000 0.00 0.00 0.00 4.26
466 467 2.275318 GTTTCTCGGCTGGATTCTCTG 58.725 52.381 0.00 0.00 0.00 3.35
467 468 1.208293 GGTTTCTCGGCTGGATTCTCT 59.792 52.381 0.00 0.00 0.00 3.10
468 469 1.657822 GGTTTCTCGGCTGGATTCTC 58.342 55.000 0.00 0.00 0.00 2.87
469 470 0.253327 GGGTTTCTCGGCTGGATTCT 59.747 55.000 0.00 0.00 0.00 2.40
470 471 0.253327 AGGGTTTCTCGGCTGGATTC 59.747 55.000 0.00 0.00 0.00 2.52
471 472 0.253327 GAGGGTTTCTCGGCTGGATT 59.747 55.000 0.00 0.00 32.18 3.01
472 473 1.908483 GAGGGTTTCTCGGCTGGAT 59.092 57.895 0.00 0.00 32.18 3.41
473 474 3.388841 GAGGGTTTCTCGGCTGGA 58.611 61.111 0.00 0.00 32.18 3.86
480 481 1.107945 CTCTCTCCCGAGGGTTTCTC 58.892 60.000 8.20 0.00 37.86 2.87
481 482 0.705253 TCTCTCTCCCGAGGGTTTCT 59.295 55.000 8.20 0.00 38.92 2.52
482 483 1.410882 CATCTCTCTCCCGAGGGTTTC 59.589 57.143 8.20 0.00 38.92 2.78
483 484 1.490574 CATCTCTCTCCCGAGGGTTT 58.509 55.000 8.20 0.00 38.92 3.27
484 485 0.397816 CCATCTCTCTCCCGAGGGTT 60.398 60.000 8.20 0.00 38.92 4.11
485 486 1.231641 CCATCTCTCTCCCGAGGGT 59.768 63.158 8.20 0.00 38.92 4.34
486 487 2.206536 GCCATCTCTCTCCCGAGGG 61.207 68.421 0.65 0.65 39.22 4.30
487 488 2.560119 CGCCATCTCTCTCCCGAGG 61.560 68.421 0.00 0.00 37.86 4.63
488 489 1.514678 CTCGCCATCTCTCTCCCGAG 61.515 65.000 0.00 0.00 38.67 4.63
489 490 1.527148 CTCGCCATCTCTCTCCCGA 60.527 63.158 0.00 0.00 0.00 5.14
490 491 3.038280 CTCGCCATCTCTCTCCCG 58.962 66.667 0.00 0.00 0.00 5.14
491 492 2.733945 GCTCGCCATCTCTCTCCC 59.266 66.667 0.00 0.00 0.00 4.30
492 493 2.086251 CTGGCTCGCCATCTCTCTCC 62.086 65.000 11.59 0.00 46.15 3.71
493 494 1.363443 CTGGCTCGCCATCTCTCTC 59.637 63.158 11.59 0.00 46.15 3.20
494 495 2.132996 CCTGGCTCGCCATCTCTCT 61.133 63.158 11.59 0.00 46.15 3.10
495 496 2.086251 CTCCTGGCTCGCCATCTCTC 62.086 65.000 11.59 0.00 46.15 3.20
496 497 2.042537 TCCTGGCTCGCCATCTCT 60.043 61.111 11.59 0.00 46.15 3.10
497 498 2.086251 CTCTCCTGGCTCGCCATCTC 62.086 65.000 11.59 0.00 46.15 2.75
498 499 2.042537 TCTCCTGGCTCGCCATCT 60.043 61.111 11.59 0.00 46.15 2.90
499 500 2.420890 CTCTCCTGGCTCGCCATC 59.579 66.667 11.59 0.00 46.15 3.51
500 501 3.859414 GCTCTCCTGGCTCGCCAT 61.859 66.667 11.59 0.00 46.15 4.40
571 572 4.504916 CCTCCTGTCTCGCCGCTG 62.505 72.222 0.00 0.00 0.00 5.18
576 577 4.154347 CAGCCCCTCCTGTCTCGC 62.154 72.222 0.00 0.00 0.00 5.03
577 578 3.465403 CCAGCCCCTCCTGTCTCG 61.465 72.222 0.00 0.00 0.00 4.04
578 579 3.086600 CCCAGCCCCTCCTGTCTC 61.087 72.222 0.00 0.00 0.00 3.36
579 580 4.748798 CCCCAGCCCCTCCTGTCT 62.749 72.222 0.00 0.00 0.00 3.41
580 581 4.741239 TCCCCAGCCCCTCCTGTC 62.741 72.222 0.00 0.00 0.00 3.51
581 582 4.285790 TTCCCCAGCCCCTCCTGT 62.286 66.667 0.00 0.00 0.00 4.00
582 583 3.415087 CTTCCCCAGCCCCTCCTG 61.415 72.222 0.00 0.00 0.00 3.86
583 584 3.626596 TCTTCCCCAGCCCCTCCT 61.627 66.667 0.00 0.00 0.00 3.69
584 585 3.412408 GTCTTCCCCAGCCCCTCC 61.412 72.222 0.00 0.00 0.00 4.30
585 586 3.787001 CGTCTTCCCCAGCCCCTC 61.787 72.222 0.00 0.00 0.00 4.30
586 587 4.332543 TCGTCTTCCCCAGCCCCT 62.333 66.667 0.00 0.00 0.00 4.79
587 588 4.097361 GTCGTCTTCCCCAGCCCC 62.097 72.222 0.00 0.00 0.00 5.80
588 589 3.003763 AGTCGTCTTCCCCAGCCC 61.004 66.667 0.00 0.00 0.00 5.19
589 590 2.266055 CAGTCGTCTTCCCCAGCC 59.734 66.667 0.00 0.00 0.00 4.85
590 591 2.266055 CCAGTCGTCTTCCCCAGC 59.734 66.667 0.00 0.00 0.00 4.85
591 592 2.660064 CCCCAGTCGTCTTCCCCAG 61.660 68.421 0.00 0.00 0.00 4.45
592 593 2.606519 CCCCAGTCGTCTTCCCCA 60.607 66.667 0.00 0.00 0.00 4.96
593 594 4.097361 GCCCCAGTCGTCTTCCCC 62.097 72.222 0.00 0.00 0.00 4.81
594 595 4.452733 CGCCCCAGTCGTCTTCCC 62.453 72.222 0.00 0.00 0.00 3.97
595 596 4.452733 CCGCCCCAGTCGTCTTCC 62.453 72.222 0.00 0.00 0.00 3.46
649 650 2.596338 AAAAGTGGAACGCCCCCG 60.596 61.111 0.00 0.00 45.86 5.73
650 651 1.529713 TGAAAAGTGGAACGCCCCC 60.530 57.895 0.00 0.00 45.86 5.40
651 652 1.658114 GTGAAAAGTGGAACGCCCC 59.342 57.895 0.00 0.00 45.86 5.80
652 653 1.658114 GGTGAAAAGTGGAACGCCC 59.342 57.895 0.00 0.00 45.86 6.13
653 654 1.281656 CGGTGAAAAGTGGAACGCC 59.718 57.895 0.00 0.00 45.86 5.68
654 655 1.370051 GCGGTGAAAAGTGGAACGC 60.370 57.895 0.00 0.00 45.86 4.84
655 656 0.316689 GTGCGGTGAAAAGTGGAACG 60.317 55.000 0.00 0.00 45.86 3.95
656 657 1.002792 GAGTGCGGTGAAAAGTGGAAC 60.003 52.381 0.00 0.00 0.00 3.62
657 658 1.305201 GAGTGCGGTGAAAAGTGGAA 58.695 50.000 0.00 0.00 0.00 3.53
658 659 0.179234 TGAGTGCGGTGAAAAGTGGA 59.821 50.000 0.00 0.00 0.00 4.02
659 660 1.021202 TTGAGTGCGGTGAAAAGTGG 58.979 50.000 0.00 0.00 0.00 4.00
660 661 2.842208 TTTGAGTGCGGTGAAAAGTG 57.158 45.000 0.00 0.00 0.00 3.16
661 662 4.097892 AGAAATTTGAGTGCGGTGAAAAGT 59.902 37.500 0.00 0.00 0.00 2.66
662 663 4.610945 AGAAATTTGAGTGCGGTGAAAAG 58.389 39.130 0.00 0.00 0.00 2.27
663 664 4.647424 AGAAATTTGAGTGCGGTGAAAA 57.353 36.364 0.00 0.00 0.00 2.29
664 665 4.097135 TCAAGAAATTTGAGTGCGGTGAAA 59.903 37.500 0.00 0.00 0.00 2.69
665 666 3.629855 TCAAGAAATTTGAGTGCGGTGAA 59.370 39.130 0.00 0.00 0.00 3.18
666 667 3.003275 GTCAAGAAATTTGAGTGCGGTGA 59.997 43.478 0.00 0.00 0.00 4.02
667 668 3.243035 TGTCAAGAAATTTGAGTGCGGTG 60.243 43.478 0.00 0.00 0.00 4.94
668 669 2.948979 TGTCAAGAAATTTGAGTGCGGT 59.051 40.909 0.00 0.00 0.00 5.68
669 670 3.250762 TCTGTCAAGAAATTTGAGTGCGG 59.749 43.478 0.00 0.00 0.00 5.69
670 671 4.472691 TCTGTCAAGAAATTTGAGTGCG 57.527 40.909 0.00 0.00 0.00 5.34
709 710 7.372451 TCGATGGAAAAGTGTTCGATAAAAT 57.628 32.000 0.00 0.00 34.24 1.82
717 718 2.664698 GCCGTTCGATGGAAAAGTGTTC 60.665 50.000 8.32 0.00 33.05 3.18
736 737 2.162681 GCTAACCATATGTCCCATGCC 58.837 52.381 1.24 0.00 0.00 4.40
796 798 9.953697 GTCCTGTGTAAGATTACAAGACTATAG 57.046 37.037 16.71 0.00 44.46 1.31
798 800 8.362464 TGTCCTGTGTAAGATTACAAGACTAT 57.638 34.615 20.73 0.00 44.46 2.12
803 805 9.035607 GTATCATGTCCTGTGTAAGATTACAAG 57.964 37.037 6.99 7.25 44.46 3.16
1076 1085 2.888051 CGCGTGTGTGTGTGTGGA 60.888 61.111 0.00 0.00 0.00 4.02
1078 1087 4.918060 CGCGCGTGTGTGTGTGTG 62.918 66.667 24.19 0.00 0.00 3.82
1095 1104 2.161486 TTTGTTGTTGTTGCGGCGC 61.161 52.632 27.44 27.44 0.00 6.53
1406 1437 4.798682 TTCTCCCTCCCTCCCGCC 62.799 72.222 0.00 0.00 0.00 6.13
1408 1439 2.444895 CCTTCTCCCTCCCTCCCG 60.445 72.222 0.00 0.00 0.00 5.14
1409 1440 2.040359 CCCTTCTCCCTCCCTCCC 60.040 72.222 0.00 0.00 0.00 4.30
1410 1441 2.770475 GCCCTTCTCCCTCCCTCC 60.770 72.222 0.00 0.00 0.00 4.30
1411 1442 2.770475 GGCCCTTCTCCCTCCCTC 60.770 72.222 0.00 0.00 0.00 4.30
1412 1443 3.208342 TTGGCCCTTCTCCCTCCCT 62.208 63.158 0.00 0.00 0.00 4.20
1659 1696 3.203546 CTGGTGGTGCTGTTGCTGC 62.204 63.158 0.00 0.00 40.48 5.25
2322 2362 1.079057 GCCGAGGAGGTTCTGGAAC 60.079 63.158 5.02 5.02 43.70 3.62
2466 2506 0.760567 CCTCCGAGACCATCATCCCA 60.761 60.000 0.00 0.00 0.00 4.37
2502 2542 0.384353 GGACGTCGCTTCTTTGTTGC 60.384 55.000 9.92 0.00 0.00 4.17
2722 2762 3.393800 TGCACCTTTCTCTTTCTCTTCG 58.606 45.455 0.00 0.00 0.00 3.79
2871 2924 1.107945 TGTACAAGGCCGATCGATGA 58.892 50.000 18.66 0.00 0.00 2.92
2946 3005 8.023021 TGTAATTGCACCATTACTCTATCTCT 57.977 34.615 17.82 0.00 35.07 3.10
3013 3078 0.317020 TGATGCTACTCGATCGCACG 60.317 55.000 11.09 3.76 36.37 5.34
3057 3122 3.700970 TGCACATTCGGCCGGAGA 61.701 61.111 27.83 12.51 0.00 3.71
3124 3189 0.827925 ACAGACTGCCGGAGAACTCA 60.828 55.000 5.05 0.00 0.00 3.41
3140 3205 6.054860 TCCTTCCTCCTTTCTTTATGACAG 57.945 41.667 0.00 0.00 0.00 3.51
3451 3528 1.375098 GCTAGCCTACGACGGTCAGT 61.375 60.000 2.29 9.49 0.00 3.41
3489 3573 1.096967 TGGATCACATCACATGCCGC 61.097 55.000 0.00 0.00 0.00 6.53
3567 3651 6.619464 AGTATCTCTCTCTCTCTCTCTCTCT 58.381 44.000 0.00 0.00 0.00 3.10
3568 3652 6.909550 AGTATCTCTCTCTCTCTCTCTCTC 57.090 45.833 0.00 0.00 0.00 3.20
3569 3653 7.760607 TCTAGTATCTCTCTCTCTCTCTCTCT 58.239 42.308 0.00 0.00 0.00 3.10
3570 3654 7.122055 CCTCTAGTATCTCTCTCTCTCTCTCTC 59.878 48.148 0.00 0.00 0.00 3.20
3571 3655 6.951198 CCTCTAGTATCTCTCTCTCTCTCTCT 59.049 46.154 0.00 0.00 0.00 3.10
3572 3656 6.722129 ACCTCTAGTATCTCTCTCTCTCTCTC 59.278 46.154 0.00 0.00 0.00 3.20
3573 3657 6.625267 ACCTCTAGTATCTCTCTCTCTCTCT 58.375 44.000 0.00 0.00 0.00 3.10
3574 3658 6.919775 ACCTCTAGTATCTCTCTCTCTCTC 57.080 45.833 0.00 0.00 0.00 3.20
3575 3659 7.691993 AAACCTCTAGTATCTCTCTCTCTCT 57.308 40.000 0.00 0.00 0.00 3.10
3576 3660 7.603024 GCTAAACCTCTAGTATCTCTCTCTCTC 59.397 44.444 0.00 0.00 0.00 3.20
3577 3661 7.450903 GCTAAACCTCTAGTATCTCTCTCTCT 58.549 42.308 0.00 0.00 0.00 3.10
3589 3673 5.043737 AGATCTCTCGCTAAACCTCTAGT 57.956 43.478 0.00 0.00 0.00 2.57
3591 3675 6.123651 AGAAAGATCTCTCGCTAAACCTCTA 58.876 40.000 0.00 0.00 0.00 2.43
3600 3684 5.561725 GCAACAAAAAGAAAGATCTCTCGCT 60.562 40.000 0.00 0.00 33.77 4.93
3680 4180 1.959042 ACAACTTGTCACTGCCAGAG 58.041 50.000 0.00 0.00 0.00 3.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.