Multiple sequence alignment - TraesCS5D01G198300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G198300 chr5D 100.000 5514 0 0 1 5514 301130288 301124775 0.000000e+00 10183.0
1 TraesCS5D01G198300 chr5D 76.800 125 24 5 39 161 324653305 324653426 1.280000e-06 65.8
2 TraesCS5D01G198300 chr5A 92.159 3405 173 40 983 4316 398290948 398287567 0.000000e+00 4723.0
3 TraesCS5D01G198300 chr5A 86.423 766 64 14 1 754 398295045 398294308 0.000000e+00 802.0
4 TraesCS5D01G198300 chr5A 90.215 511 33 14 4313 4820 398287510 398287014 0.000000e+00 651.0
5 TraesCS5D01G198300 chr5A 86.294 197 19 6 5325 5514 398285787 398285592 2.010000e-49 207.0
6 TraesCS5D01G198300 chr5A 93.204 103 7 0 4848 4950 398286901 398286799 9.570000e-33 152.0
7 TraesCS5D01G198300 chr5A 91.860 86 5 2 3332 3416 709731134 709731050 9.700000e-23 119.0
8 TraesCS5D01G198300 chr5A 100.000 45 0 0 952 996 398291008 398290964 3.540000e-12 84.2
9 TraesCS5D01G198300 chr2D 91.139 79 7 0 3337 3415 600300249 600300171 2.100000e-19 108.0
10 TraesCS5D01G198300 chr2D 76.812 138 20 9 30 161 446602305 446602436 3.560000e-07 67.6
11 TraesCS5D01G198300 chr7B 80.272 147 20 9 30 172 566321163 566321022 9.770000e-18 102.0
12 TraesCS5D01G198300 chr7B 96.970 33 1 0 3387 3419 556742461 556742429 7.720000e-04 56.5
13 TraesCS5D01G198300 chr1A 81.395 129 20 3 36 161 548399552 548399679 9.770000e-18 102.0
14 TraesCS5D01G198300 chr1A 97.619 42 1 0 5015 5056 145379500 145379459 7.660000e-09 73.1
15 TraesCS5D01G198300 chr2B 88.608 79 9 0 3337 3415 730191959 730191881 4.550000e-16 97.1
16 TraesCS5D01G198300 chr6B 84.783 92 12 2 5185 5275 199935469 199935379 2.120000e-14 91.6
17 TraesCS5D01G198300 chr6A 88.571 70 8 0 5185 5254 135448767 135448698 9.840000e-13 86.1
18 TraesCS5D01G198300 chr2A 78.519 135 22 7 30 161 212636577 212636447 1.270000e-11 82.4
19 TraesCS5D01G198300 chr2A 81.250 96 11 6 39 131 651979073 651978982 2.760000e-08 71.3
20 TraesCS5D01G198300 chr2A 79.630 108 13 7 30 132 688416359 688416256 9.910000e-08 69.4
21 TraesCS5D01G198300 chr5B 84.524 84 9 4 32 114 710178703 710178783 4.580000e-11 80.5
22 TraesCS5D01G198300 chr5B 94.737 38 1 1 290 327 466374269 466374233 2.150000e-04 58.4
23 TraesCS5D01G198300 chr3A 77.483 151 20 11 30 172 572345517 572345661 1.650000e-10 78.7
24 TraesCS5D01G198300 chr1D 97.674 43 1 0 5015 5057 143951678 143951720 2.130000e-09 75.0
25 TraesCS5D01G198300 chr1B 97.674 43 1 0 5015 5057 193279016 193279058 2.130000e-09 75.0
26 TraesCS5D01G198300 chr1B 79.808 104 14 4 5192 5293 501328663 501328565 9.910000e-08 69.4
27 TraesCS5D01G198300 chr4A 100.000 28 0 0 3383 3410 531303448 531303421 1.000000e-02 52.8
28 TraesCS5D01G198300 chr4A 100.000 28 0 0 3389 3416 695493176 695493149 1.000000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G198300 chr5D 301124775 301130288 5513 True 10183.0 10183 100.0000 1 5514 1 chr5D.!!$R1 5513
1 TraesCS5D01G198300 chr5A 398285592 398295045 9453 True 1103.2 4723 91.3825 1 5514 6 chr5A.!!$R2 5513

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
950 2169 0.109781 CAGGTTATGTGCCACGTTGC 60.110 55.000 4.35 4.35 0.00 4.17 F
1369 4536 0.109532 TTCTGGTGATTGCGGACCAA 59.890 50.000 0.00 0.00 41.76 3.67 F
2975 6155 0.316204 ATTTGTGCCAGAAGTGCTGC 59.684 50.000 0.00 0.00 43.50 5.25 F
3125 6334 1.004394 CTCCCCCTTTACACAGGAACC 59.996 57.143 0.00 0.00 35.71 3.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2536 5710 1.202746 GCCAGAGCTCCAGAATTAGGG 60.203 57.143 10.93 0.00 35.50 3.53 R
3101 6310 1.064825 CTGTGTAAAGGGGGAGGTGT 58.935 55.000 0.00 0.00 0.00 4.16 R
3809 7022 0.309922 CATATGCCGGCAAAGCTGAG 59.690 55.000 36.33 15.16 37.02 3.35 R
5023 9028 0.101219 GCTGTGCGGATCAATTTCCC 59.899 55.000 0.00 0.00 31.61 3.97 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 8.130307 AGATTTTTGTGACAACATGTAAAAGC 57.870 30.769 0.00 3.34 35.83 3.51
52 53 3.134574 AGCGGTTGAGTTGGTTATTGA 57.865 42.857 0.00 0.00 0.00 2.57
54 55 2.414161 GCGGTTGAGTTGGTTATTGAGC 60.414 50.000 0.00 0.00 0.00 4.26
89 90 7.746703 ACTTATTAGATATGGGTTCAAGTCCC 58.253 38.462 0.00 0.00 44.81 4.46
109 110 7.010771 AGTCCCCTTTTAAGCACTTTATTTCT 58.989 34.615 0.00 0.00 0.00 2.52
229 230 2.110006 GATCGAAGGGGAGCTGGC 59.890 66.667 0.00 0.00 0.00 4.85
242 243 4.647615 CTGGCGGGGTAGCGATCG 62.648 72.222 11.69 11.69 38.18 3.69
245 246 2.338984 GCGGGGTAGCGATCGAAT 59.661 61.111 21.57 9.02 0.00 3.34
246 247 2.022129 GCGGGGTAGCGATCGAATG 61.022 63.158 21.57 1.44 0.00 2.67
247 248 1.658114 CGGGGTAGCGATCGAATGA 59.342 57.895 21.57 0.00 0.00 2.57
248 249 0.387367 CGGGGTAGCGATCGAATGAG 60.387 60.000 21.57 0.00 0.00 2.90
249 250 0.674534 GGGGTAGCGATCGAATGAGT 59.325 55.000 21.57 0.00 0.00 3.41
250 251 1.336056 GGGGTAGCGATCGAATGAGTC 60.336 57.143 21.57 0.00 0.00 3.36
310 314 2.226437 TGCCTTTCACGAGAAGCAAATC 59.774 45.455 6.98 0.00 33.57 2.17
312 316 3.684788 GCCTTTCACGAGAAGCAAATCTA 59.315 43.478 0.00 0.00 34.71 1.98
315 319 4.864916 TTCACGAGAAGCAAATCTATGC 57.135 40.909 0.00 0.00 46.78 3.14
321 325 4.767578 AGAAGCAAATCTATGCCTCTCA 57.232 40.909 0.00 0.00 42.04 3.27
324 328 5.915504 AGAAGCAAATCTATGCCTCTCACAG 60.916 44.000 0.00 0.00 42.04 3.66
388 392 4.701765 GGCACTATTGTGTCTCTCATGAT 58.298 43.478 9.05 0.00 44.72 2.45
395 399 3.742385 TGTGTCTCTCATGATGCAAACA 58.258 40.909 0.00 0.00 0.00 2.83
406 410 5.352293 TCATGATGCAAACATGTGTCTCTAC 59.648 40.000 25.48 0.00 46.01 2.59
407 411 4.640364 TGATGCAAACATGTGTCTCTACA 58.360 39.130 0.00 0.00 36.35 2.74
413 417 5.683859 CAAACATGTGTCTCTACAAGAAGC 58.316 41.667 0.00 0.00 37.36 3.86
488 493 1.476891 ACAGTTGTGTGTCTCTCGTGT 59.523 47.619 0.00 0.00 34.75 4.49
492 497 2.417339 TGTGTGTCTCTCGTGTAAGC 57.583 50.000 0.00 0.00 0.00 3.09
497 502 3.987868 TGTGTCTCTCGTGTAAGCAAATC 59.012 43.478 0.00 0.00 0.00 2.17
509 514 1.512734 GCAAATCTGCGCCTCAACG 60.513 57.895 4.18 0.00 39.20 4.10
520 525 1.230324 GCCTCAACGAGAAGCAACTT 58.770 50.000 0.00 0.00 0.00 2.66
532 537 4.218312 AGAAGCAACTTTGTCCCTTTCAT 58.782 39.130 0.00 0.00 0.00 2.57
534 539 2.629617 AGCAACTTTGTCCCTTTCATGG 59.370 45.455 0.00 0.00 0.00 3.66
542 547 6.156083 ACTTTGTCCCTTTCATGGAAGAAAAA 59.844 34.615 15.83 8.62 37.09 1.94
592 603 5.387788 GTTTTGTCTAAAACCTAGGGGGAA 58.612 41.667 14.81 0.00 46.27 3.97
593 604 5.871324 TTTGTCTAAAACCTAGGGGGAAT 57.129 39.130 14.81 0.00 38.76 3.01
605 616 1.295101 GGGGAATGGGCAAAAACCG 59.705 57.895 0.00 0.00 0.00 4.44
606 617 1.188871 GGGGAATGGGCAAAAACCGA 61.189 55.000 0.00 0.00 0.00 4.69
607 618 0.682292 GGGAATGGGCAAAAACCGAA 59.318 50.000 0.00 0.00 0.00 4.30
608 619 1.070914 GGGAATGGGCAAAAACCGAAA 59.929 47.619 0.00 0.00 0.00 3.46
609 620 2.485657 GGGAATGGGCAAAAACCGAAAA 60.486 45.455 0.00 0.00 0.00 2.29
610 621 2.805671 GGAATGGGCAAAAACCGAAAAG 59.194 45.455 0.00 0.00 0.00 2.27
611 622 1.877637 ATGGGCAAAAACCGAAAAGC 58.122 45.000 0.00 0.00 0.00 3.51
612 623 0.179070 TGGGCAAAAACCGAAAAGCC 60.179 50.000 0.00 0.00 41.29 4.35
613 624 0.179070 GGGCAAAAACCGAAAAGCCA 60.179 50.000 0.00 0.00 43.72 4.75
640 651 6.912203 AAAACCATCTAAAACCCAAAAACG 57.088 33.333 0.00 0.00 0.00 3.60
694 705 2.330041 CACCCAAAACGCGACACC 59.670 61.111 15.93 0.00 0.00 4.16
695 706 2.184167 CACCCAAAACGCGACACCT 61.184 57.895 15.93 0.00 0.00 4.00
698 709 1.234615 CCCAAAACGCGACACCTGAT 61.235 55.000 15.93 0.00 0.00 2.90
699 710 1.434555 CCAAAACGCGACACCTGATA 58.565 50.000 15.93 0.00 0.00 2.15
704 715 1.226974 CGCGACACCTGATAGTGGG 60.227 63.158 0.00 0.00 42.28 4.61
705 716 1.521681 GCGACACCTGATAGTGGGC 60.522 63.158 0.00 0.00 42.28 5.36
706 717 1.897423 CGACACCTGATAGTGGGCA 59.103 57.895 0.00 0.00 42.28 5.36
707 718 0.460284 CGACACCTGATAGTGGGCAC 60.460 60.000 0.00 0.00 42.28 5.01
708 719 0.460284 GACACCTGATAGTGGGCACG 60.460 60.000 0.00 0.00 42.28 5.34
709 720 1.815421 CACCTGATAGTGGGCACGC 60.815 63.158 0.00 0.00 33.95 5.34
726 738 1.000955 ACGCTCAGTCCACCTAAAGTG 59.999 52.381 0.00 0.00 46.83 3.16
909 2128 1.613520 GGCCTGTCCAGACCCTTTTAC 60.614 57.143 0.00 0.00 34.01 2.01
912 2131 2.427506 CTGTCCAGACCCTTTTACAGC 58.572 52.381 0.00 0.00 0.00 4.40
918 2137 2.355115 CCCTTTTACAGCCGGGCT 59.645 61.111 17.69 17.69 40.77 5.19
942 2161 1.134729 CCATTTGGCCAGGTTATGTGC 60.135 52.381 5.11 0.00 0.00 4.57
950 2169 0.109781 CAGGTTATGTGCCACGTTGC 60.110 55.000 4.35 4.35 0.00 4.17
1085 4228 4.785453 GTCCAAGGCAGGGGCGAG 62.785 72.222 0.00 0.00 42.47 5.03
1188 4331 1.669440 GTGGCCGGTCAGTACTGAA 59.331 57.895 26.74 7.87 41.85 3.02
1206 4349 4.040217 ACTGAAGTGCTCTTGAGTCTTGAT 59.960 41.667 13.83 0.00 42.67 2.57
1352 4511 6.911484 CATTTCGGAAATGTACTGTTGTTC 57.089 37.500 27.42 0.00 42.53 3.18
1369 4536 0.109532 TTCTGGTGATTGCGGACCAA 59.890 50.000 0.00 0.00 41.76 3.67
1373 4540 0.958822 GGTGATTGCGGACCAAACTT 59.041 50.000 0.00 0.00 36.92 2.66
1389 4556 6.123651 ACCAAACTTCACAATGTTGGTAGTA 58.876 36.000 3.57 0.00 31.21 1.82
1390 4557 6.262273 ACCAAACTTCACAATGTTGGTAGTAG 59.738 38.462 3.57 0.00 31.21 2.57
1427 4594 8.466617 TTTCTTCCAGTGAGATATAGTAGACC 57.533 38.462 0.00 0.00 0.00 3.85
1428 4595 7.150447 TCTTCCAGTGAGATATAGTAGACCA 57.850 40.000 0.00 0.00 0.00 4.02
1437 4604 7.448777 GTGAGATATAGTAGACCAGACCAATGA 59.551 40.741 0.00 0.00 0.00 2.57
1551 4719 1.081242 CTGTGTGGAATTGCGTGGC 60.081 57.895 0.00 0.00 0.00 5.01
1557 4725 1.268352 GTGGAATTGCGTGGCAGTTTA 59.732 47.619 0.00 0.00 38.53 2.01
1593 4761 3.119531 CCGAAGAAATGCTTGCCACATTA 60.120 43.478 0.00 0.00 36.74 1.90
1615 4783 1.164411 CGCATGGCCTGACAGTTAAA 58.836 50.000 3.32 0.00 0.00 1.52
1619 4787 3.065925 GCATGGCCTGACAGTTAAAGATC 59.934 47.826 3.32 0.00 0.00 2.75
1626 4794 4.629200 CCTGACAGTTAAAGATCTGCACTC 59.371 45.833 0.00 0.00 35.37 3.51
1640 4808 1.067669 TGCACTCGAGGCTCACATATC 59.932 52.381 18.41 0.00 0.00 1.63
1643 4811 1.339610 ACTCGAGGCTCACATATCTGC 59.660 52.381 18.41 0.00 0.00 4.26
1649 4817 0.942962 GCTCACATATCTGCACTGCC 59.057 55.000 0.00 0.00 0.00 4.85
1661 4829 1.450531 GCACTGCCATATGCCAGGAC 61.451 60.000 17.32 5.68 40.16 3.85
1726 4894 3.368843 GCCTTTGCAAATGTTGTAGATGC 59.631 43.478 13.23 0.00 37.47 3.91
1767 4935 5.337554 CAGTAACTGTATGCTGTAACGCTA 58.662 41.667 0.00 0.00 0.00 4.26
1797 4965 3.102204 TGCAGACTCATCCATCAGAGAA 58.898 45.455 0.00 0.00 35.83 2.87
1827 4996 5.868454 TCTTGTCTGGATGATTTGTCAGAA 58.132 37.500 0.00 0.00 37.90 3.02
1866 5035 3.740321 TCATCGGCTTCAATTTTTGTTGC 59.260 39.130 0.00 0.00 0.00 4.17
1879 5048 5.514274 TTTTTGTTGCTTTCACCCTAGAG 57.486 39.130 0.00 0.00 0.00 2.43
1903 5074 6.211384 AGGTTTACCTTGCTCTATTTTTGCAT 59.789 34.615 0.00 0.00 46.09 3.96
1925 5096 1.028868 GTGGAGTACGCGAGGGTAGT 61.029 60.000 15.93 7.27 0.00 2.73
1974 5145 1.028905 GAGTGGTAGAGATGAGCGCT 58.971 55.000 11.27 11.27 37.83 5.92
1976 5147 1.135915 AGTGGTAGAGATGAGCGCTTG 59.864 52.381 13.26 0.00 31.34 4.01
2014 5185 0.854218 TTTGGGCCCCAGTGTAAGAA 59.146 50.000 22.27 0.00 33.81 2.52
2018 5189 1.285078 GGGCCCCAGTGTAAGAATTCT 59.715 52.381 12.23 0.88 0.00 2.40
2052 5223 2.176045 TGGAGGAAATCGCTGTACTCA 58.824 47.619 0.00 0.00 0.00 3.41
2059 5230 3.895232 AATCGCTGTACTCACTGGAAT 57.105 42.857 0.00 0.00 0.00 3.01
2082 5253 4.730966 TGGCTTTGTTGACCCACTATTTA 58.269 39.130 0.00 0.00 0.00 1.40
2116 5287 4.273257 TCGTGCGTGAAGGCGACA 62.273 61.111 0.00 0.00 35.06 4.35
2123 5294 1.148310 CGTGAAGGCGACACAAGATT 58.852 50.000 14.84 0.00 38.04 2.40
2214 5385 8.939929 ACAGTCTGTGATAACAAGAAATATGTG 58.060 33.333 4.21 0.00 0.00 3.21
2237 5408 4.386652 GCCAACATCTAATTTGTGCTGTTG 59.613 41.667 16.92 16.92 41.77 3.33
2252 5423 5.182950 TGTGCTGTTGTCAAGGTTATAATGG 59.817 40.000 0.00 0.00 0.00 3.16
2322 5493 3.320541 CCTGCCATTGTTTTGAACTACCA 59.679 43.478 0.00 0.00 0.00 3.25
2368 5541 7.883311 ACTTGCATAGTTCTTAACAATGTACCT 59.117 33.333 0.00 0.00 31.29 3.08
2369 5542 9.378551 CTTGCATAGTTCTTAACAATGTACCTA 57.621 33.333 0.00 0.00 0.00 3.08
2420 5594 8.391106 GTCTTACTTTTGGATATTACTGTGCAG 58.609 37.037 0.00 0.00 0.00 4.41
2536 5710 6.381801 AGCTTCAATTTACATGTTACTGCAC 58.618 36.000 2.30 0.00 0.00 4.57
2632 5807 7.011763 CCACAGGACATGAAGAACATATAACTG 59.988 40.741 0.00 0.00 37.46 3.16
2660 5835 2.091555 ACCTTGTTGCCAGGAAGGTAAA 60.092 45.455 8.31 0.00 46.20 2.01
2661 5836 2.962421 CCTTGTTGCCAGGAAGGTAAAA 59.038 45.455 0.00 0.00 43.99 1.52
2662 5837 3.386402 CCTTGTTGCCAGGAAGGTAAAAA 59.614 43.478 0.00 0.00 43.99 1.94
2697 5872 9.496873 AATCCCAATTGACATGCATTTAATATG 57.503 29.630 7.12 0.00 0.00 1.78
2709 5884 7.976135 TGCATTTAATATGTTTTGGCAACTT 57.024 28.000 0.00 0.00 37.61 2.66
2722 5897 7.041372 TGTTTTGGCAACTTATCACTCTAGTTC 60.041 37.037 0.00 0.00 30.08 3.01
2728 5903 7.249147 GCAACTTATCACTCTAGTTCGTCTTA 58.751 38.462 0.00 0.00 30.08 2.10
2764 5939 7.630082 TGAATTCCAGGTAGTGCTTACTATTT 58.370 34.615 2.27 0.00 32.61 1.40
2920 6100 6.512415 CGAAAACACTTTCTGCTCTCTGAAAT 60.512 38.462 0.00 0.00 39.10 2.17
2936 6116 5.994250 TCTGAAATATTAGAAGTGCTGGCT 58.006 37.500 0.00 0.00 0.00 4.75
2962 6142 7.475137 TTCTATTTCCCCCACTTTATTTGTG 57.525 36.000 0.00 0.00 35.39 3.33
2963 6143 4.551702 ATTTCCCCCACTTTATTTGTGC 57.448 40.909 0.00 0.00 34.38 4.57
2975 6155 0.316204 ATTTGTGCCAGAAGTGCTGC 59.684 50.000 0.00 0.00 43.50 5.25
2983 6163 1.445871 CAGAAGTGCTGCACTGCATA 58.554 50.000 35.48 0.00 44.62 3.14
2987 6167 1.901591 AGTGCTGCACTGCATACTTT 58.098 45.000 32.54 7.03 43.63 2.66
3002 6182 7.941238 ACTGCATACTTTCATCCTATGCTATTT 59.059 33.333 9.59 0.00 42.18 1.40
3003 6183 8.327941 TGCATACTTTCATCCTATGCTATTTC 57.672 34.615 9.59 0.00 42.18 2.17
3004 6184 8.159447 TGCATACTTTCATCCTATGCTATTTCT 58.841 33.333 9.59 0.00 42.18 2.52
3005 6185 9.007901 GCATACTTTCATCCTATGCTATTTCTT 57.992 33.333 0.00 0.00 39.70 2.52
3016 6196 9.342308 TCCTATGCTATTTCTTTTATCCTTGTG 57.658 33.333 0.00 0.00 0.00 3.33
3017 6197 9.342308 CCTATGCTATTTCTTTTATCCTTGTGA 57.658 33.333 0.00 0.00 0.00 3.58
3020 6200 9.638176 ATGCTATTTCTTTTATCCTTGTGAGAT 57.362 29.630 0.00 0.00 0.00 2.75
3021 6201 9.466497 TGCTATTTCTTTTATCCTTGTGAGATT 57.534 29.630 0.00 0.00 0.00 2.40
3022 6202 9.943163 GCTATTTCTTTTATCCTTGTGAGATTC 57.057 33.333 0.00 0.00 0.00 2.52
3025 6205 9.745018 ATTTCTTTTATCCTTGTGAGATTCTCA 57.255 29.630 12.38 12.38 38.25 3.27
3036 6245 7.992033 CCTTGTGAGATTCTCAGATTTATCCTT 59.008 37.037 16.62 0.00 41.46 3.36
3101 6310 6.550481 TGGCATCCTATTGCATAAATCAAAGA 59.450 34.615 0.00 0.00 44.59 2.52
3107 6316 7.283127 TCCTATTGCATAAATCAAAGACACCTC 59.717 37.037 0.00 0.00 0.00 3.85
3113 6322 1.760405 ATCAAAGACACCTCCCCCTT 58.240 50.000 0.00 0.00 0.00 3.95
3125 6334 1.004394 CTCCCCCTTTACACAGGAACC 59.996 57.143 0.00 0.00 35.71 3.62
3158 6367 1.406539 GAGCAGTGTTTATGCCATGGG 59.593 52.381 15.13 0.00 44.97 4.00
3299 6512 6.872020 CACCCCATATTCGTAGTGTATAAAGG 59.128 42.308 0.00 0.00 0.00 3.11
3300 6513 6.556116 ACCCCATATTCGTAGTGTATAAAGGT 59.444 38.462 0.00 0.00 0.00 3.50
3301 6514 7.071572 ACCCCATATTCGTAGTGTATAAAGGTT 59.928 37.037 0.00 0.00 0.00 3.50
3353 6566 3.496331 ACCCCCTCTGTAACAAAATGTG 58.504 45.455 0.00 0.00 0.00 3.21
3357 6570 4.344104 CCCTCTGTAACAAAATGTGGGAT 58.656 43.478 0.00 0.00 34.43 3.85
3359 6572 4.766891 CCTCTGTAACAAAATGTGGGATGT 59.233 41.667 0.00 0.00 0.00 3.06
3360 6573 5.943416 CCTCTGTAACAAAATGTGGGATGTA 59.057 40.000 0.00 0.00 0.00 2.29
3420 6633 7.921786 TTTTGTTACAGAGGGAGTATCATTG 57.078 36.000 0.00 0.00 36.25 2.82
3442 6655 2.122783 TGGTGCTTACATTGCTACCC 57.877 50.000 0.00 0.00 33.70 3.69
3479 6692 1.280133 CTGACTCTGCAGGGGATGAAA 59.720 52.381 20.01 0.00 32.26 2.69
3515 6728 5.956068 TGTTGACAACATATGCTGCTTTA 57.044 34.783 17.02 0.00 36.25 1.85
3517 6730 5.473162 TGTTGACAACATATGCTGCTTTACT 59.527 36.000 17.02 0.00 36.25 2.24
3520 6733 4.335416 ACAACATATGCTGCTTTACTGGT 58.665 39.130 6.02 0.00 0.00 4.00
3532 6745 3.810743 GCTTTACTGGTCCATCCACTGTT 60.811 47.826 0.00 0.00 41.93 3.16
3550 6763 5.689514 CACTGTTCTCTTATCATGGATCGAC 59.310 44.000 0.00 0.00 0.00 4.20
3569 6782 3.428180 CGACGACAAATCTGATCCTCAGT 60.428 47.826 4.21 0.00 44.58 3.41
3595 6808 1.709147 ATTCAGCTGCCGCATTCGAC 61.709 55.000 9.47 0.00 39.10 4.20
3684 6897 4.800914 GCCACTGTACATGACTGAAGAAGT 60.801 45.833 0.00 0.00 43.85 3.01
3705 6918 2.716217 AGCACAACCATTTCTAGGCTC 58.284 47.619 0.00 0.00 0.00 4.70
3723 6936 4.657039 AGGCTCGGTAAGGGTATTTGATAA 59.343 41.667 0.00 0.00 0.00 1.75
3725 6938 5.469084 GGCTCGGTAAGGGTATTTGATAAAG 59.531 44.000 0.00 0.00 0.00 1.85
3770 6983 2.426381 GTCTTACCCTAGTTCACCCGAG 59.574 54.545 0.00 0.00 0.00 4.63
3788 7001 6.152154 CACCCGAGGTTAAATTCCTTTACAAT 59.848 38.462 0.00 0.00 35.20 2.71
3789 7002 6.376299 ACCCGAGGTTAAATTCCTTTACAATC 59.624 38.462 0.00 0.00 35.20 2.67
3823 7036 1.308069 TGAATCTCAGCTTTGCCGGC 61.308 55.000 22.73 22.73 0.00 6.13
3826 7039 0.181114 ATCTCAGCTTTGCCGGCATA 59.819 50.000 33.25 25.45 0.00 3.14
3835 7048 0.034574 TTGCCGGCATATGTTGGACT 60.035 50.000 33.25 0.00 0.00 3.85
3845 7058 6.650807 CGGCATATGTTGGACTAAACAGATAT 59.349 38.462 4.29 0.00 42.99 1.63
3852 7065 7.816640 TGTTGGACTAAACAGATATTTTCAGC 58.183 34.615 0.00 0.00 35.16 4.26
3857 7070 7.295952 ACTAAACAGATATTTTCAGCGAGTG 57.704 36.000 0.00 0.00 0.00 3.51
3893 7106 4.046938 TCGATATCTCACTGGTTCTTGC 57.953 45.455 0.34 0.00 0.00 4.01
3895 7108 2.010145 TATCTCACTGGTTCTTGCGC 57.990 50.000 0.00 0.00 0.00 6.09
3905 7118 0.793861 GTTCTTGCGCGGTGACAATA 59.206 50.000 8.83 0.00 0.00 1.90
3941 7154 1.225704 GCATTAGGGCAGCAGAGGT 59.774 57.895 0.00 0.00 0.00 3.85
4031 7244 1.269448 GGGATGAAGAAGCACGCAAAA 59.731 47.619 0.00 0.00 0.00 2.44
4053 7266 5.948742 ATTTTGGAGAAAGTGTTTCCCAA 57.051 34.783 13.75 13.75 42.69 4.12
4063 7276 1.384525 TGTTTCCCAAACACGAGGTG 58.615 50.000 0.00 0.00 45.79 4.00
4075 7288 1.683385 CACGAGGTGATATCTCCAGCA 59.317 52.381 22.57 0.00 35.23 4.41
4101 7314 6.258068 ACACATTAGCTAGAAACTTAATCGGC 59.742 38.462 0.00 0.00 0.00 5.54
4117 7330 0.804989 CGGCGCCAGAGATTTTTCTT 59.195 50.000 28.98 0.00 0.00 2.52
4153 7366 1.272490 TCGTCTGGAGCCTTGTACTTG 59.728 52.381 0.00 0.00 0.00 3.16
4178 7391 8.818860 TGTACTATCAGTAATGGGTGTTTAAGT 58.181 33.333 0.00 0.00 31.62 2.24
4185 7398 8.973182 TCAGTAATGGGTGTTTAAGTTTTCTTT 58.027 29.630 0.00 0.00 40.91 2.52
4215 7429 2.166459 GTGGATAGTCAGTAGCACTGCA 59.834 50.000 3.30 0.00 45.54 4.41
4225 7439 2.618709 AGTAGCACTGCAAAGTTTGTCC 59.381 45.455 16.70 2.15 0.00 4.02
4226 7440 0.381801 AGCACTGCAAAGTTTGTCCG 59.618 50.000 16.70 8.28 0.00 4.79
4227 7441 0.594796 GCACTGCAAAGTTTGTCCGG 60.595 55.000 16.70 8.66 0.00 5.14
4257 7471 6.194796 TCTACTCAAATTGCTAACATTGGC 57.805 37.500 0.00 0.00 34.98 4.52
4258 7472 4.192429 ACTCAAATTGCTAACATTGGCC 57.808 40.909 0.00 0.00 33.25 5.36
4259 7473 3.181397 CTCAAATTGCTAACATTGGCCG 58.819 45.455 0.00 0.00 33.25 6.13
4319 7593 6.536731 TCTGTATCTTACTCGACGGATTAC 57.463 41.667 0.00 0.00 0.00 1.89
4472 7746 3.605664 AGCAACCTGCCGTTTGCC 61.606 61.111 6.77 0.00 46.52 4.52
4499 7773 0.812811 CTCTGATGCGGACACCATGG 60.813 60.000 11.19 11.19 0.00 3.66
4503 7777 2.947938 GATGCGGACACCATGGAGGG 62.948 65.000 21.47 10.02 43.89 4.30
4563 7837 2.958355 TGGACAGGCAAAAGAAAAGGAG 59.042 45.455 0.00 0.00 0.00 3.69
4566 7840 3.225940 ACAGGCAAAAGAAAAGGAGAGG 58.774 45.455 0.00 0.00 0.00 3.69
4570 7844 3.230976 GCAAAAGAAAAGGAGAGGGGAA 58.769 45.455 0.00 0.00 0.00 3.97
4572 7846 4.100963 GCAAAAGAAAAGGAGAGGGGAAAA 59.899 41.667 0.00 0.00 0.00 2.29
4573 7847 5.396324 GCAAAAGAAAAGGAGAGGGGAAAAA 60.396 40.000 0.00 0.00 0.00 1.94
4606 7880 1.627864 GGTGGTAATGTTGCCCACTT 58.372 50.000 7.86 0.00 46.30 3.16
4617 7891 2.672961 TGCCCACTTGAAGATAGACG 57.327 50.000 0.00 0.00 0.00 4.18
4618 7892 2.176045 TGCCCACTTGAAGATAGACGA 58.824 47.619 0.00 0.00 0.00 4.20
4621 7895 4.192317 GCCCACTTGAAGATAGACGATTT 58.808 43.478 0.00 0.00 0.00 2.17
4646 7925 0.039764 TGTCTCGTGGTCTCAGGGAT 59.960 55.000 0.00 0.00 0.00 3.85
4647 7926 0.741915 GTCTCGTGGTCTCAGGGATC 59.258 60.000 0.00 0.00 0.00 3.36
4648 7927 0.331616 TCTCGTGGTCTCAGGGATCA 59.668 55.000 0.00 0.00 31.79 2.92
4649 7928 0.743688 CTCGTGGTCTCAGGGATCAG 59.256 60.000 0.00 0.00 35.49 2.90
4650 7929 0.684479 TCGTGGTCTCAGGGATCAGG 60.684 60.000 0.00 0.00 40.95 3.86
4651 7930 1.680522 CGTGGTCTCAGGGATCAGGG 61.681 65.000 0.00 0.00 37.31 4.45
4652 7931 0.325671 GTGGTCTCAGGGATCAGGGA 60.326 60.000 0.00 0.00 35.49 4.20
4653 7932 0.644380 TGGTCTCAGGGATCAGGGAT 59.356 55.000 0.00 0.00 30.57 3.85
4660 7939 2.918934 TCAGGGATCAGGGATCAACAAA 59.081 45.455 8.35 0.00 40.50 2.83
4665 7944 4.104738 GGGATCAGGGATCAACAAATCCTA 59.895 45.833 8.35 0.00 44.06 2.94
4667 7946 6.012508 GGGATCAGGGATCAACAAATCCTATA 60.013 42.308 8.35 0.00 44.06 1.31
4668 7947 7.108847 GGATCAGGGATCAACAAATCCTATAG 58.891 42.308 8.35 0.00 44.06 1.31
4692 7971 1.330521 TCTGCAAACTGAACGAAGCAC 59.669 47.619 0.00 0.00 0.00 4.40
4697 7976 1.087202 AACTGAACGAAGCACACGCA 61.087 50.000 0.00 0.00 42.27 5.24
4702 7981 0.730265 AACGAAGCACACGCAAAAGA 59.270 45.000 0.00 0.00 42.27 2.52
4726 8005 7.656948 AGATCAAGTGTTTCTCTCTTCTTCTTG 59.343 37.037 0.00 0.00 33.48 3.02
4752 8033 9.162764 GTTTGCACAAATCTCTTCTAGGTAATA 57.837 33.333 0.00 0.00 32.36 0.98
4753 8034 8.718102 TTGCACAAATCTCTTCTAGGTAATAC 57.282 34.615 0.00 0.00 0.00 1.89
4754 8035 8.079211 TGCACAAATCTCTTCTAGGTAATACT 57.921 34.615 0.00 0.00 0.00 2.12
4755 8036 8.198109 TGCACAAATCTCTTCTAGGTAATACTC 58.802 37.037 0.00 0.00 0.00 2.59
4756 8037 7.654116 GCACAAATCTCTTCTAGGTAATACTCC 59.346 40.741 0.00 0.00 0.00 3.85
4757 8038 8.919145 CACAAATCTCTTCTAGGTAATACTCCT 58.081 37.037 0.00 0.00 38.91 3.69
4760 8041 8.851541 AATCTCTTCTAGGTAATACTCCTACG 57.148 38.462 0.00 0.00 36.60 3.51
4762 8043 8.484214 TCTCTTCTAGGTAATACTCCTACGTA 57.516 38.462 0.00 0.00 36.60 3.57
4763 8044 8.584157 TCTCTTCTAGGTAATACTCCTACGTAG 58.416 40.741 15.92 15.92 38.33 3.51
4765 8046 9.368416 TCTTCTAGGTAATACTCCTACGTAGTA 57.632 37.037 20.73 10.28 45.11 1.82
4810 8091 4.705023 GGTTGCCTATTTTTCTGAAGCCTA 59.295 41.667 0.00 0.00 0.00 3.93
4814 8095 5.648092 TGCCTATTTTTCTGAAGCCTAGTTC 59.352 40.000 0.00 0.00 0.00 3.01
4815 8096 5.648092 GCCTATTTTTCTGAAGCCTAGTTCA 59.352 40.000 0.00 0.00 35.16 3.18
4821 8102 6.575162 TTTCTGAAGCCTAGTTCATTTTCC 57.425 37.500 0.00 0.00 35.88 3.13
4822 8103 4.589908 TCTGAAGCCTAGTTCATTTTCCC 58.410 43.478 0.00 0.00 35.88 3.97
4823 8104 4.289672 TCTGAAGCCTAGTTCATTTTCCCT 59.710 41.667 0.00 0.00 35.88 4.20
4825 8106 6.012858 TCTGAAGCCTAGTTCATTTTCCCTAA 60.013 38.462 0.00 0.00 35.88 2.69
4826 8107 5.944007 TGAAGCCTAGTTCATTTTCCCTAAC 59.056 40.000 0.00 0.00 31.31 2.34
4827 8108 4.856509 AGCCTAGTTCATTTTCCCTAACC 58.143 43.478 0.00 0.00 0.00 2.85
4828 8109 4.291249 AGCCTAGTTCATTTTCCCTAACCA 59.709 41.667 0.00 0.00 0.00 3.67
4831 8112 5.125578 CCTAGTTCATTTTCCCTAACCAAGC 59.874 44.000 0.00 0.00 0.00 4.01
4835 8116 5.659440 TCATTTTCCCTAACCAAGCATTC 57.341 39.130 0.00 0.00 0.00 2.67
4836 8117 4.466015 TCATTTTCCCTAACCAAGCATTCC 59.534 41.667 0.00 0.00 0.00 3.01
4837 8118 2.525105 TTCCCTAACCAAGCATTCCC 57.475 50.000 0.00 0.00 0.00 3.97
4838 8119 1.681229 TCCCTAACCAAGCATTCCCT 58.319 50.000 0.00 0.00 0.00 4.20
4840 8121 2.381961 TCCCTAACCAAGCATTCCCTTT 59.618 45.455 0.00 0.00 0.00 3.11
4841 8122 3.173151 CCCTAACCAAGCATTCCCTTTT 58.827 45.455 0.00 0.00 0.00 2.27
4844 8125 4.402474 CCTAACCAAGCATTCCCTTTTAGG 59.598 45.833 0.00 0.00 32.89 2.69
4846 8127 1.482182 CCAAGCATTCCCTTTTAGGCC 59.518 52.381 0.00 0.00 32.73 5.19
4847 8128 2.460669 CAAGCATTCCCTTTTAGGCCT 58.539 47.619 11.78 11.78 32.73 5.19
4848 8129 2.428530 CAAGCATTCCCTTTTAGGCCTC 59.571 50.000 9.68 0.00 32.73 4.70
4849 8130 1.063642 AGCATTCCCTTTTAGGCCTCC 60.064 52.381 9.68 0.00 32.73 4.30
4850 8131 1.680338 CATTCCCTTTTAGGCCTCCG 58.320 55.000 9.68 0.00 32.73 4.63
4851 8132 1.064685 CATTCCCTTTTAGGCCTCCGT 60.065 52.381 9.68 0.00 32.73 4.69
4938 8303 3.795688 TGTTCCAGCCTCTTTGATCTT 57.204 42.857 0.00 0.00 0.00 2.40
4939 8304 3.415212 TGTTCCAGCCTCTTTGATCTTG 58.585 45.455 0.00 0.00 0.00 3.02
5004 9009 5.947228 AAAAACTCTCTGAATGCGATCAA 57.053 34.783 0.00 0.00 0.00 2.57
5005 9010 5.947228 AAAACTCTCTGAATGCGATCAAA 57.053 34.783 0.00 0.00 0.00 2.69
5006 9011 6.506500 AAAACTCTCTGAATGCGATCAAAT 57.493 33.333 0.00 0.00 0.00 2.32
5007 9012 7.615582 AAAACTCTCTGAATGCGATCAAATA 57.384 32.000 0.00 0.00 0.00 1.40
5008 9013 6.841443 AACTCTCTGAATGCGATCAAATAG 57.159 37.500 0.00 0.00 0.00 1.73
5009 9014 4.749099 ACTCTCTGAATGCGATCAAATAGC 59.251 41.667 0.00 0.00 0.00 2.97
5010 9015 4.060900 TCTCTGAATGCGATCAAATAGCC 58.939 43.478 0.00 0.00 0.00 3.93
5011 9016 4.063689 CTCTGAATGCGATCAAATAGCCT 58.936 43.478 0.00 0.00 0.00 4.58
5012 9017 4.454678 TCTGAATGCGATCAAATAGCCTT 58.545 39.130 0.00 0.00 0.00 4.35
5013 9018 5.610398 TCTGAATGCGATCAAATAGCCTTA 58.390 37.500 0.00 0.00 0.00 2.69
5014 9019 6.233434 TCTGAATGCGATCAAATAGCCTTAT 58.767 36.000 0.00 0.00 0.00 1.73
5015 9020 6.148315 TCTGAATGCGATCAAATAGCCTTATG 59.852 38.462 0.00 0.00 0.00 1.90
5016 9021 5.764686 TGAATGCGATCAAATAGCCTTATGT 59.235 36.000 0.00 0.00 0.00 2.29
5017 9022 6.262944 TGAATGCGATCAAATAGCCTTATGTT 59.737 34.615 0.00 0.00 0.00 2.71
5018 9023 5.422666 TGCGATCAAATAGCCTTATGTTG 57.577 39.130 0.00 0.00 0.00 3.33
5019 9024 4.222114 GCGATCAAATAGCCTTATGTTGC 58.778 43.478 0.00 0.00 0.00 4.17
5020 9025 4.023707 GCGATCAAATAGCCTTATGTTGCT 60.024 41.667 0.00 0.00 41.57 3.91
5021 9026 5.446709 CGATCAAATAGCCTTATGTTGCTG 58.553 41.667 0.00 0.00 38.52 4.41
5022 9027 4.637483 TCAAATAGCCTTATGTTGCTGC 57.363 40.909 0.00 0.00 38.52 5.25
5023 9028 3.065233 TCAAATAGCCTTATGTTGCTGCG 59.935 43.478 0.00 0.00 38.52 5.18
5024 9029 1.597742 ATAGCCTTATGTTGCTGCGG 58.402 50.000 0.00 0.00 38.52 5.69
5025 9030 0.463654 TAGCCTTATGTTGCTGCGGG 60.464 55.000 0.00 0.00 38.52 6.13
5026 9031 1.748879 GCCTTATGTTGCTGCGGGA 60.749 57.895 0.00 0.00 0.00 5.14
5027 9032 1.312371 GCCTTATGTTGCTGCGGGAA 61.312 55.000 0.00 0.00 0.00 3.97
5028 9033 1.173043 CCTTATGTTGCTGCGGGAAA 58.827 50.000 0.00 0.00 0.00 3.13
5029 9034 1.750778 CCTTATGTTGCTGCGGGAAAT 59.249 47.619 0.00 0.64 0.00 2.17
5030 9035 2.166254 CCTTATGTTGCTGCGGGAAATT 59.834 45.455 0.00 0.00 0.00 1.82
5031 9036 2.937469 TATGTTGCTGCGGGAAATTG 57.063 45.000 0.00 0.00 0.00 2.32
5032 9037 1.255882 ATGTTGCTGCGGGAAATTGA 58.744 45.000 0.00 0.00 0.00 2.57
5033 9038 1.255882 TGTTGCTGCGGGAAATTGAT 58.744 45.000 0.00 0.00 0.00 2.57
5034 9039 1.202114 TGTTGCTGCGGGAAATTGATC 59.798 47.619 0.00 0.00 0.00 2.92
5035 9040 0.817013 TTGCTGCGGGAAATTGATCC 59.183 50.000 0.00 0.00 38.86 3.36
5036 9041 1.356624 GCTGCGGGAAATTGATCCG 59.643 57.895 9.23 9.23 45.84 4.18
5040 9045 2.476772 CGGGAAATTGATCCGCACA 58.523 52.632 2.22 0.00 40.62 4.57
5041 9046 0.378257 CGGGAAATTGATCCGCACAG 59.622 55.000 2.22 0.00 40.62 3.66
5042 9047 0.101219 GGGAAATTGATCCGCACAGC 59.899 55.000 0.00 0.00 40.62 4.40
5043 9048 0.810648 GGAAATTGATCCGCACAGCA 59.189 50.000 0.00 0.00 0.00 4.41
5044 9049 1.468054 GGAAATTGATCCGCACAGCAC 60.468 52.381 0.00 0.00 0.00 4.40
5045 9050 0.527565 AAATTGATCCGCACAGCACC 59.472 50.000 0.00 0.00 0.00 5.01
5046 9051 0.608856 AATTGATCCGCACAGCACCA 60.609 50.000 0.00 0.00 0.00 4.17
5047 9052 1.308069 ATTGATCCGCACAGCACCAC 61.308 55.000 0.00 0.00 0.00 4.16
5048 9053 2.358615 GATCCGCACAGCACCACA 60.359 61.111 0.00 0.00 0.00 4.17
5049 9054 2.359107 ATCCGCACAGCACCACAG 60.359 61.111 0.00 0.00 0.00 3.66
5050 9055 2.786539 GATCCGCACAGCACCACAGA 62.787 60.000 0.00 0.00 0.00 3.41
5051 9056 2.189191 ATCCGCACAGCACCACAGAT 62.189 55.000 0.00 0.00 0.00 2.90
5052 9057 1.968017 CCGCACAGCACCACAGATT 60.968 57.895 0.00 0.00 0.00 2.40
5053 9058 1.499056 CGCACAGCACCACAGATTC 59.501 57.895 0.00 0.00 0.00 2.52
5054 9059 1.878775 GCACAGCACCACAGATTCC 59.121 57.895 0.00 0.00 0.00 3.01
5055 9060 0.607489 GCACAGCACCACAGATTCCT 60.607 55.000 0.00 0.00 0.00 3.36
5056 9061 1.446907 CACAGCACCACAGATTCCTC 58.553 55.000 0.00 0.00 0.00 3.71
5057 9062 1.059098 ACAGCACCACAGATTCCTCA 58.941 50.000 0.00 0.00 0.00 3.86
5058 9063 1.632409 ACAGCACCACAGATTCCTCAT 59.368 47.619 0.00 0.00 0.00 2.90
5059 9064 2.040813 ACAGCACCACAGATTCCTCATT 59.959 45.455 0.00 0.00 0.00 2.57
5060 9065 2.422479 CAGCACCACAGATTCCTCATTG 59.578 50.000 0.00 0.00 0.00 2.82
5061 9066 1.747355 GCACCACAGATTCCTCATTGG 59.253 52.381 0.00 0.00 33.68 3.16
5062 9067 2.618816 GCACCACAGATTCCTCATTGGA 60.619 50.000 0.00 0.00 44.51 3.53
5075 9080 6.704289 TCCTCATTGGAAAATGCTGAATAG 57.296 37.500 0.00 0.00 42.94 1.73
5076 9081 5.068198 TCCTCATTGGAAAATGCTGAATAGC 59.932 40.000 0.00 0.00 45.53 2.97
5077 9082 5.738208 CCTCATTGGAAAATGCTGAATAGCC 60.738 44.000 0.00 0.00 43.46 3.93
5078 9083 7.864315 CCTCATTGGAAAATGCTGAATAGCCT 61.864 42.308 0.00 0.00 43.46 4.58
5079 9084 9.760992 CCTCATTGGAAAATGCTGAATAGCCTG 62.761 44.444 0.00 0.00 43.46 4.85
5088 9093 4.866682 GCTGAATAGCCTGACAACTAAC 57.133 45.455 0.00 0.00 44.33 2.34
5089 9094 4.253685 GCTGAATAGCCTGACAACTAACA 58.746 43.478 0.00 0.00 44.33 2.41
5090 9095 4.093556 GCTGAATAGCCTGACAACTAACAC 59.906 45.833 0.00 0.00 44.33 3.32
5091 9096 4.575885 TGAATAGCCTGACAACTAACACC 58.424 43.478 0.00 0.00 0.00 4.16
5092 9097 4.286032 TGAATAGCCTGACAACTAACACCT 59.714 41.667 0.00 0.00 0.00 4.00
5093 9098 5.482526 TGAATAGCCTGACAACTAACACCTA 59.517 40.000 0.00 0.00 0.00 3.08
5094 9099 6.014070 TGAATAGCCTGACAACTAACACCTAA 60.014 38.462 0.00 0.00 0.00 2.69
5095 9100 4.699925 AGCCTGACAACTAACACCTAAA 57.300 40.909 0.00 0.00 0.00 1.85
5096 9101 5.242795 AGCCTGACAACTAACACCTAAAT 57.757 39.130 0.00 0.00 0.00 1.40
5097 9102 5.631119 AGCCTGACAACTAACACCTAAATT 58.369 37.500 0.00 0.00 0.00 1.82
5098 9103 6.775708 AGCCTGACAACTAACACCTAAATTA 58.224 36.000 0.00 0.00 0.00 1.40
5099 9104 7.228590 AGCCTGACAACTAACACCTAAATTAA 58.771 34.615 0.00 0.00 0.00 1.40
5100 9105 7.888546 AGCCTGACAACTAACACCTAAATTAAT 59.111 33.333 0.00 0.00 0.00 1.40
5101 9106 8.520351 GCCTGACAACTAACACCTAAATTAATT 58.480 33.333 0.00 0.00 0.00 1.40
5105 9110 9.135843 GACAACTAACACCTAAATTAATTTGGC 57.864 33.333 21.19 1.46 0.00 4.52
5106 9111 8.866093 ACAACTAACACCTAAATTAATTTGGCT 58.134 29.630 21.19 5.13 0.00 4.75
5107 9112 9.139174 CAACTAACACCTAAATTAATTTGGCTG 57.861 33.333 21.19 17.58 0.00 4.85
5108 9113 8.644374 ACTAACACCTAAATTAATTTGGCTGA 57.356 30.769 21.19 2.41 0.00 4.26
5109 9114 8.520351 ACTAACACCTAAATTAATTTGGCTGAC 58.480 33.333 21.19 0.00 0.00 3.51
5110 9115 6.280855 ACACCTAAATTAATTTGGCTGACC 57.719 37.500 21.19 0.00 0.00 4.02
5125 9130 6.808321 TGGCTGACCAGAAATACTAATACT 57.192 37.500 0.47 0.00 42.67 2.12
5126 9131 7.907841 TGGCTGACCAGAAATACTAATACTA 57.092 36.000 0.47 0.00 42.67 1.82
5127 9132 8.313944 TGGCTGACCAGAAATACTAATACTAA 57.686 34.615 0.47 0.00 42.67 2.24
5128 9133 8.202137 TGGCTGACCAGAAATACTAATACTAAC 58.798 37.037 0.47 0.00 42.67 2.34
5129 9134 8.422566 GGCTGACCAGAAATACTAATACTAACT 58.577 37.037 0.47 0.00 35.26 2.24
5130 9135 9.465985 GCTGACCAGAAATACTAATACTAACTC 57.534 37.037 0.47 0.00 0.00 3.01
5131 9136 9.968870 CTGACCAGAAATACTAATACTAACTCC 57.031 37.037 0.00 0.00 0.00 3.85
5132 9137 8.921205 TGACCAGAAATACTAATACTAACTCCC 58.079 37.037 0.00 0.00 0.00 4.30
5133 9138 8.849543 ACCAGAAATACTAATACTAACTCCCA 57.150 34.615 0.00 0.00 0.00 4.37
5134 9139 9.275572 ACCAGAAATACTAATACTAACTCCCAA 57.724 33.333 0.00 0.00 0.00 4.12
5140 9145 9.914834 AATACTAATACTAACTCCCAAATTGCA 57.085 29.630 0.00 0.00 0.00 4.08
5141 9146 7.625828 ACTAATACTAACTCCCAAATTGCAC 57.374 36.000 0.00 0.00 0.00 4.57
5142 9147 5.914898 AATACTAACTCCCAAATTGCACC 57.085 39.130 0.00 0.00 0.00 5.01
5143 9148 3.237268 ACTAACTCCCAAATTGCACCA 57.763 42.857 0.00 0.00 0.00 4.17
5144 9149 3.778265 ACTAACTCCCAAATTGCACCAT 58.222 40.909 0.00 0.00 0.00 3.55
5145 9150 3.763897 ACTAACTCCCAAATTGCACCATC 59.236 43.478 0.00 0.00 0.00 3.51
5146 9151 2.307496 ACTCCCAAATTGCACCATCA 57.693 45.000 0.00 0.00 0.00 3.07
5147 9152 2.607499 ACTCCCAAATTGCACCATCAA 58.393 42.857 0.00 0.00 0.00 2.57
5148 9153 2.299867 ACTCCCAAATTGCACCATCAAC 59.700 45.455 0.00 0.00 0.00 3.18
5149 9154 2.299582 CTCCCAAATTGCACCATCAACA 59.700 45.455 0.00 0.00 0.00 3.33
5150 9155 2.036992 TCCCAAATTGCACCATCAACAC 59.963 45.455 0.00 0.00 0.00 3.32
5151 9156 2.037511 CCCAAATTGCACCATCAACACT 59.962 45.455 0.00 0.00 0.00 3.55
5152 9157 3.494749 CCCAAATTGCACCATCAACACTT 60.495 43.478 0.00 0.00 0.00 3.16
5153 9158 4.128643 CCAAATTGCACCATCAACACTTT 58.871 39.130 0.00 0.00 0.00 2.66
5154 9159 4.024725 CCAAATTGCACCATCAACACTTTG 60.025 41.667 0.00 0.00 0.00 2.77
5155 9160 2.886862 TTGCACCATCAACACTTTGG 57.113 45.000 0.00 0.00 36.56 3.28
5156 9161 1.039068 TGCACCATCAACACTTTGGG 58.961 50.000 0.00 0.00 34.72 4.12
5157 9162 1.327303 GCACCATCAACACTTTGGGA 58.673 50.000 0.00 0.00 34.72 4.37
5158 9163 1.686052 GCACCATCAACACTTTGGGAA 59.314 47.619 0.00 0.00 34.72 3.97
5159 9164 2.102252 GCACCATCAACACTTTGGGAAA 59.898 45.455 0.00 0.00 34.72 3.13
5160 9165 3.431486 GCACCATCAACACTTTGGGAAAA 60.431 43.478 0.00 0.00 34.72 2.29
5161 9166 4.370917 CACCATCAACACTTTGGGAAAAG 58.629 43.478 0.00 0.00 34.72 2.27
5162 9167 3.181466 ACCATCAACACTTTGGGAAAAGC 60.181 43.478 0.00 0.00 34.72 3.51
5163 9168 3.181467 CCATCAACACTTTGGGAAAAGCA 60.181 43.478 0.00 0.00 33.06 3.91
5164 9169 3.518634 TCAACACTTTGGGAAAAGCAC 57.481 42.857 0.00 0.00 33.06 4.40
5165 9170 2.828520 TCAACACTTTGGGAAAAGCACA 59.171 40.909 0.00 0.00 33.06 4.57
5166 9171 3.259374 TCAACACTTTGGGAAAAGCACAA 59.741 39.130 0.00 0.00 38.36 3.33
5172 9177 4.769345 TTTGGGAAAAGCACAAAGGAAT 57.231 36.364 0.00 0.00 44.64 3.01
5173 9178 3.749665 TGGGAAAAGCACAAAGGAATG 57.250 42.857 0.00 0.00 0.00 2.67
5174 9179 3.303938 TGGGAAAAGCACAAAGGAATGA 58.696 40.909 0.00 0.00 0.00 2.57
5175 9180 3.321682 TGGGAAAAGCACAAAGGAATGAG 59.678 43.478 0.00 0.00 0.00 2.90
5176 9181 3.573967 GGGAAAAGCACAAAGGAATGAGA 59.426 43.478 0.00 0.00 0.00 3.27
5177 9182 4.221482 GGGAAAAGCACAAAGGAATGAGAT 59.779 41.667 0.00 0.00 0.00 2.75
5178 9183 5.418840 GGGAAAAGCACAAAGGAATGAGATA 59.581 40.000 0.00 0.00 0.00 1.98
5179 9184 6.325596 GGAAAAGCACAAAGGAATGAGATAC 58.674 40.000 0.00 0.00 0.00 2.24
5180 9185 5.904362 AAAGCACAAAGGAATGAGATACC 57.096 39.130 0.00 0.00 0.00 2.73
5181 9186 4.574674 AGCACAAAGGAATGAGATACCA 57.425 40.909 0.00 0.00 0.00 3.25
5182 9187 5.121380 AGCACAAAGGAATGAGATACCAT 57.879 39.130 0.00 0.00 0.00 3.55
5183 9188 4.885907 AGCACAAAGGAATGAGATACCATG 59.114 41.667 0.00 0.00 0.00 3.66
5184 9189 4.641989 GCACAAAGGAATGAGATACCATGT 59.358 41.667 0.00 0.00 0.00 3.21
5185 9190 5.822519 GCACAAAGGAATGAGATACCATGTA 59.177 40.000 0.00 0.00 0.00 2.29
5186 9191 6.238484 GCACAAAGGAATGAGATACCATGTAC 60.238 42.308 0.00 0.00 0.00 2.90
5187 9192 7.050377 CACAAAGGAATGAGATACCATGTACT 58.950 38.462 0.00 0.00 0.00 2.73
5188 9193 8.204160 CACAAAGGAATGAGATACCATGTACTA 58.796 37.037 0.00 0.00 0.00 1.82
5189 9194 8.204836 ACAAAGGAATGAGATACCATGTACTAC 58.795 37.037 0.00 0.00 0.00 2.73
5200 9205 1.955080 CATGTACTACCTCCGTCTCCC 59.045 57.143 0.00 0.00 0.00 4.30
5209 9214 1.339151 CCTCCGTCTCCCAAAAGAAGG 60.339 57.143 0.13 0.13 43.76 3.46
5210 9215 0.036306 TCCGTCTCCCAAAAGAAGGC 59.964 55.000 1.57 0.00 42.59 4.35
5217 9222 5.506708 GTCTCCCAAAAGAAGGCCTATAAA 58.493 41.667 5.16 0.00 0.00 1.40
5248 9254 9.393249 CTCTTAAGTCAAACGATGCAAAATTTA 57.607 29.630 1.63 0.00 0.00 1.40
5397 9594 5.496133 TTGGTCAAAATTTGCACCATTTG 57.504 34.783 21.59 9.78 39.15 2.32
5404 9601 4.789012 AATTTGCACCATTTGACTCGAT 57.211 36.364 0.00 0.00 0.00 3.59
5431 9628 8.957466 ACAAAAGTTATAAGCCTATTCTCAACC 58.043 33.333 0.00 0.00 0.00 3.77
5433 9630 6.481434 AGTTATAAGCCTATTCTCAACCGT 57.519 37.500 0.00 0.00 0.00 4.83
5437 9634 4.820894 AAGCCTATTCTCAACCGTTAGT 57.179 40.909 0.00 0.00 0.00 2.24
5442 9639 5.349809 CCTATTCTCAACCGTTAGTTCTCC 58.650 45.833 0.00 0.00 36.18 3.71
5449 9646 6.204108 TCTCAACCGTTAGTTCTCCAAATTTC 59.796 38.462 0.00 0.00 36.18 2.17
5481 9680 8.313944 ACCACCTAATTTTGTAAGAGGTTTTT 57.686 30.769 0.00 0.00 38.49 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 7.056800 CGCTTTTACATGTTGTCACAAAAATC 58.943 34.615 2.30 0.00 36.16 2.17
34 35 3.074412 AGCTCAATAACCAACTCAACCG 58.926 45.455 0.00 0.00 0.00 4.44
168 169 9.114952 ACAATGAATTTTATTTTTCAAACCGGT 57.885 25.926 0.00 0.00 35.63 5.28
187 188 5.681337 TCGTTGTCAATGCTTACAATGAA 57.319 34.783 7.46 0.00 44.49 2.57
190 191 4.629634 TCGATCGTTGTCAATGCTTACAAT 59.370 37.500 15.94 0.00 37.87 2.71
229 230 0.387367 CTCATTCGATCGCTACCCCG 60.387 60.000 11.09 0.00 0.00 5.73
354 358 2.317530 ATAGTGCCTCTCGGAAAAGC 57.682 50.000 0.00 0.00 0.00 3.51
384 388 5.247862 TGTAGAGACACATGTTTGCATCAT 58.752 37.500 0.00 0.00 31.99 2.45
385 389 4.640364 TGTAGAGACACATGTTTGCATCA 58.360 39.130 0.00 0.00 31.99 3.07
388 392 4.702831 TCTTGTAGAGACACATGTTTGCA 58.297 39.130 0.00 0.00 34.48 4.08
395 399 7.013655 ACAAATTTGCTTCTTGTAGAGACACAT 59.986 33.333 18.12 0.00 34.48 3.21
406 410 5.472148 TGATAGGCACAAATTTGCTTCTTG 58.528 37.500 18.12 9.44 42.56 3.02
407 411 5.726980 TGATAGGCACAAATTTGCTTCTT 57.273 34.783 18.12 6.46 42.56 2.52
413 417 8.537049 TTTCTTTCATGATAGGCACAAATTTG 57.463 30.769 16.67 16.67 0.00 2.32
492 497 0.095935 CTCGTTGAGGCGCAGATTTG 59.904 55.000 10.83 0.00 0.00 2.32
497 502 2.734673 GCTTCTCGTTGAGGCGCAG 61.735 63.158 10.83 0.00 38.01 5.18
509 514 3.632145 TGAAAGGGACAAAGTTGCTTCTC 59.368 43.478 0.00 0.00 0.00 2.87
592 603 1.542328 GGCTTTTCGGTTTTTGCCCAT 60.542 47.619 0.00 0.00 34.81 4.00
593 604 0.179070 GGCTTTTCGGTTTTTGCCCA 60.179 50.000 0.00 0.00 34.81 5.36
656 667 6.071560 GGGTGTCTTCTCGGGATTTTATTTTT 60.072 38.462 0.00 0.00 0.00 1.94
657 668 5.417894 GGGTGTCTTCTCGGGATTTTATTTT 59.582 40.000 0.00 0.00 0.00 1.82
658 669 4.948004 GGGTGTCTTCTCGGGATTTTATTT 59.052 41.667 0.00 0.00 0.00 1.40
659 670 4.018779 TGGGTGTCTTCTCGGGATTTTATT 60.019 41.667 0.00 0.00 0.00 1.40
660 671 3.521937 TGGGTGTCTTCTCGGGATTTTAT 59.478 43.478 0.00 0.00 0.00 1.40
661 672 2.907696 TGGGTGTCTTCTCGGGATTTTA 59.092 45.455 0.00 0.00 0.00 1.52
694 705 0.529337 CTGAGCGTGCCCACTATCAG 60.529 60.000 12.31 12.31 36.19 2.90
695 706 1.257750 ACTGAGCGTGCCCACTATCA 61.258 55.000 0.00 0.58 0.00 2.15
698 709 2.646175 GGACTGAGCGTGCCCACTA 61.646 63.158 0.00 0.00 0.00 2.74
699 710 4.008933 GGACTGAGCGTGCCCACT 62.009 66.667 0.00 0.00 0.00 4.00
704 715 0.320421 TTTAGGTGGACTGAGCGTGC 60.320 55.000 0.00 0.00 34.08 5.34
705 716 1.000955 ACTTTAGGTGGACTGAGCGTG 59.999 52.381 0.00 0.00 0.00 5.34
706 717 1.000955 CACTTTAGGTGGACTGAGCGT 59.999 52.381 0.00 0.00 41.90 5.07
707 718 1.272490 TCACTTTAGGTGGACTGAGCG 59.728 52.381 0.00 0.00 45.38 5.03
708 719 2.613223 GGTCACTTTAGGTGGACTGAGC 60.613 54.545 0.00 0.00 45.38 4.26
709 720 2.900546 AGGTCACTTTAGGTGGACTGAG 59.099 50.000 0.00 0.00 45.38 3.35
726 738 0.691332 AAAGGTCCCCTTCGAAGGTC 59.309 55.000 35.89 25.82 43.92 3.85
728 740 0.690762 TGAAAGGTCCCCTTCGAAGG 59.309 55.000 33.29 33.29 43.92 3.46
732 744 5.681639 ACTAATATTGAAAGGTCCCCTTCG 58.318 41.667 0.00 0.00 43.92 3.79
797 926 7.348201 CGAGAACTAATATTGAAAGGCATGTC 58.652 38.462 0.00 0.00 0.00 3.06
798 927 6.260936 CCGAGAACTAATATTGAAAGGCATGT 59.739 38.462 0.00 0.00 0.00 3.21
804 933 5.237344 CAGCCCCGAGAACTAATATTGAAAG 59.763 44.000 0.00 0.00 0.00 2.62
806 935 4.444306 CCAGCCCCGAGAACTAATATTGAA 60.444 45.833 0.00 0.00 0.00 2.69
807 936 3.071023 CCAGCCCCGAGAACTAATATTGA 59.929 47.826 0.00 0.00 0.00 2.57
808 937 3.403038 CCAGCCCCGAGAACTAATATTG 58.597 50.000 0.00 0.00 0.00 1.90
812 941 1.527370 GCCAGCCCCGAGAACTAAT 59.473 57.895 0.00 0.00 0.00 1.73
894 2113 1.822506 GGCTGTAAAAGGGTCTGGAC 58.177 55.000 0.00 0.00 0.00 4.02
895 2114 0.323629 CGGCTGTAAAAGGGTCTGGA 59.676 55.000 0.00 0.00 0.00 3.86
937 2156 0.890542 ACATCAGCAACGTGGCACAT 60.891 50.000 19.06 5.16 44.52 3.21
942 2161 1.577328 GGTGGACATCAGCAACGTGG 61.577 60.000 0.00 0.00 42.97 4.94
950 2169 0.692476 TTGGTCAGGGTGGACATCAG 59.308 55.000 0.00 0.00 39.59 2.90
1085 4228 3.348119 GTTCCATCAAGAACCTTCCTCC 58.652 50.000 0.00 0.00 40.25 4.30
1188 4331 4.888326 AGAATCAAGACTCAAGAGCACT 57.112 40.909 0.00 0.00 0.00 4.40
1206 4349 2.037772 GAGCAACCAGGTCTCTCAAGAA 59.962 50.000 13.54 0.00 41.51 2.52
1345 4504 0.950836 CCGCAATCACCAGAACAACA 59.049 50.000 0.00 0.00 0.00 3.33
1352 4511 0.240945 GTTTGGTCCGCAATCACCAG 59.759 55.000 0.00 0.00 43.68 4.00
1373 4540 9.999660 TGTTTATAACTACTACCAACATTGTGA 57.000 29.630 0.00 0.00 0.00 3.58
1409 4576 6.299922 TGGTCTGGTCTACTATATCTCACTG 58.700 44.000 0.00 0.00 0.00 3.66
1423 4590 4.532126 TGTAGTCAATCATTGGTCTGGTCT 59.468 41.667 0.00 0.00 0.00 3.85
1424 4591 4.832248 TGTAGTCAATCATTGGTCTGGTC 58.168 43.478 0.00 0.00 0.00 4.02
1425 4592 4.908601 TGTAGTCAATCATTGGTCTGGT 57.091 40.909 0.00 0.00 0.00 4.00
1426 4593 6.127810 CAATGTAGTCAATCATTGGTCTGG 57.872 41.667 0.00 0.00 43.82 3.86
1465 4632 8.650143 ACTAAAAAGATGAATTACCACCACAT 57.350 30.769 0.00 0.00 0.00 3.21
1468 4635 9.967451 TGATACTAAAAAGATGAATTACCACCA 57.033 29.630 0.00 0.00 0.00 4.17
1493 4660 7.627585 AAATCAACATGAAGACGAACAAATG 57.372 32.000 0.00 0.00 0.00 2.32
1531 4699 1.172180 CCACGCAATTCCACACAGGT 61.172 55.000 0.00 0.00 39.02 4.00
1551 4719 3.058914 CGGAAGAGCACAAAGGTAAACTG 60.059 47.826 0.00 0.00 0.00 3.16
1557 4725 1.416401 TCTTCGGAAGAGCACAAAGGT 59.584 47.619 16.19 0.00 43.69 3.50
1593 4761 2.116983 AACTGTCAGGCCATGCGAGT 62.117 55.000 5.01 3.15 0.00 4.18
1615 4783 0.682532 TGAGCCTCGAGTGCAGATCT 60.683 55.000 22.44 6.51 0.00 2.75
1619 4787 0.457443 TATGTGAGCCTCGAGTGCAG 59.543 55.000 22.44 5.51 0.00 4.41
1626 4794 1.068281 AGTGCAGATATGTGAGCCTCG 59.932 52.381 3.61 0.00 0.00 4.63
1640 4808 4.246053 TGGCATATGGCAGTGCAG 57.754 55.556 26.67 1.97 46.12 4.41
1649 4817 1.224075 CTTGAGCGTCCTGGCATATG 58.776 55.000 0.00 0.00 34.64 1.78
1661 4829 2.977914 TCTCTCCAAAATCCTTGAGCG 58.022 47.619 0.00 0.00 0.00 5.03
1745 4913 4.451629 AGCGTTACAGCATACAGTTACT 57.548 40.909 2.64 0.00 40.15 2.24
1748 4916 3.518590 GGTAGCGTTACAGCATACAGTT 58.481 45.455 11.70 0.00 40.15 3.16
1767 4935 1.765314 GATGAGTCTGCATACCTGGGT 59.235 52.381 0.00 0.00 0.00 4.51
1797 4965 8.186709 ACAAATCATCCAGACAAGAAAAAGAT 57.813 30.769 0.00 0.00 0.00 2.40
1800 4968 7.285172 TCTGACAAATCATCCAGACAAGAAAAA 59.715 33.333 0.00 0.00 33.22 1.94
1805 4973 6.564709 TTTCTGACAAATCATCCAGACAAG 57.435 37.500 0.00 0.00 35.63 3.16
1808 4976 7.149569 TGAATTTCTGACAAATCATCCAGAC 57.850 36.000 0.00 0.00 35.63 3.51
1810 4978 6.376299 TCCTGAATTTCTGACAAATCATCCAG 59.624 38.462 4.98 0.00 33.22 3.86
1816 4985 7.539712 TCGTATCCTGAATTTCTGACAAATC 57.460 36.000 4.98 0.00 0.00 2.17
1827 4996 5.812642 GCCGATGATATTCGTATCCTGAATT 59.187 40.000 0.00 0.00 37.28 2.17
1879 5048 5.778862 TGCAAAAATAGAGCAAGGTAAACC 58.221 37.500 0.00 0.00 34.97 3.27
1889 5058 2.682856 TCCACGGATGCAAAAATAGAGC 59.317 45.455 0.00 0.00 0.00 4.09
1890 5059 3.941483 ACTCCACGGATGCAAAAATAGAG 59.059 43.478 0.00 0.00 0.00 2.43
1892 5061 5.156804 GTACTCCACGGATGCAAAAATAG 57.843 43.478 0.00 0.00 0.00 1.73
1950 5121 3.628032 CGCTCATCTCTACCACTCTAACA 59.372 47.826 0.00 0.00 0.00 2.41
1974 5145 1.813178 TCACGCAACCAAACAAGACAA 59.187 42.857 0.00 0.00 0.00 3.18
1976 5147 2.774439 ATCACGCAACCAAACAAGAC 57.226 45.000 0.00 0.00 0.00 3.01
2014 5185 5.966935 TCCTCCATAAAACAGAGAGGAGAAT 59.033 40.000 7.80 0.00 46.33 2.40
2052 5223 2.365293 GGTCAACAAAGCCAATTCCAGT 59.635 45.455 0.00 0.00 0.00 4.00
2082 5253 4.268644 CGCACGACAAACTGATGATAGAAT 59.731 41.667 0.00 0.00 0.00 2.40
2100 5271 4.059459 GTGTCGCCTTCACGCACG 62.059 66.667 0.00 0.00 33.11 5.34
2116 5287 5.319453 TGCAATTTCTCTCCTCAATCTTGT 58.681 37.500 0.00 0.00 0.00 3.16
2123 5294 1.283029 CCCCTGCAATTTCTCTCCTCA 59.717 52.381 0.00 0.00 0.00 3.86
2201 5372 7.701539 TTAGATGTTGGCACATATTTCTTGT 57.298 32.000 0.00 0.00 44.22 3.16
2214 5385 4.178545 ACAGCACAAATTAGATGTTGGC 57.821 40.909 5.68 0.00 0.00 4.52
2237 5408 7.709182 GCCCAAATAAACCATTATAACCTTGAC 59.291 37.037 0.00 0.00 31.44 3.18
2252 5423 5.360714 TGATGATCTTCTGGCCCAAATAAAC 59.639 40.000 0.00 0.00 0.00 2.01
2343 5516 8.268850 AGGTACATTGTTAAGAACTATGCAAG 57.731 34.615 11.88 0.00 44.75 4.01
2369 5542 9.354673 ACTATAAGCCACATATTGCAACTTTAT 57.645 29.630 0.00 0.00 0.00 1.40
2439 5613 9.998106 AACTATGTACTCACATAAAAGAACACT 57.002 29.630 0.00 0.00 44.94 3.55
2442 5616 8.175716 GCCAACTATGTACTCACATAAAAGAAC 58.824 37.037 0.00 0.00 44.94 3.01
2457 5631 3.373748 CGAAAGCATGTGCCAACTATGTA 59.626 43.478 0.57 0.00 43.38 2.29
2459 5633 2.478370 CCGAAAGCATGTGCCAACTATG 60.478 50.000 0.57 0.00 43.38 2.23
2504 5678 8.565896 AACATGTAAATTGAAGCTCTACATGA 57.434 30.769 22.13 0.00 46.66 3.07
2506 5680 9.672673 AGTAACATGTAAATTGAAGCTCTACAT 57.327 29.630 0.00 0.00 34.35 2.29
2508 5682 7.905493 GCAGTAACATGTAAATTGAAGCTCTAC 59.095 37.037 0.00 0.00 0.00 2.59
2536 5710 1.202746 GCCAGAGCTCCAGAATTAGGG 60.203 57.143 10.93 0.00 35.50 3.53
2661 5836 9.382275 GCATGTCAATTGGGATTTAGTAAATTT 57.618 29.630 9.47 0.00 0.00 1.82
2662 5837 8.538701 TGCATGTCAATTGGGATTTAGTAAATT 58.461 29.630 9.47 0.00 0.00 1.82
2663 5838 8.076910 TGCATGTCAATTGGGATTTAGTAAAT 57.923 30.769 7.87 7.87 0.00 1.40
2679 5854 7.605309 TGCCAAAACATATTAAATGCATGTCAA 59.395 29.630 0.00 0.00 31.82 3.18
2681 5856 7.536895 TGCCAAAACATATTAAATGCATGTC 57.463 32.000 0.00 0.00 31.82 3.06
2685 5860 7.976135 AAGTTGCCAAAACATATTAAATGCA 57.024 28.000 0.00 0.00 0.00 3.96
2697 5872 6.803154 ACTAGAGTGATAAGTTGCCAAAAC 57.197 37.500 0.00 0.00 0.00 2.43
2735 5910 5.649782 AAGCACTACCTGGAATTCAAATG 57.350 39.130 7.93 0.00 0.00 2.32
2920 6100 9.712305 GAAATAGAATAGCCAGCACTTCTAATA 57.288 33.333 14.15 0.34 34.77 0.98
2936 6116 9.196139 CACAAATAAAGTGGGGGAAATAGAATA 57.804 33.333 0.00 0.00 33.43 1.75
2962 6142 2.952245 CAGTGCAGCACTTCTGGC 59.048 61.111 26.16 0.00 42.59 4.85
2963 6143 1.895231 TGCAGTGCAGCACTTCTGG 60.895 57.895 26.16 15.28 42.59 3.86
2975 6155 5.354054 GCATAGGATGAAAGTATGCAGTG 57.646 43.478 8.35 0.00 45.57 3.66
3002 6182 8.138928 TCTGAGAATCTCACAAGGATAAAAGA 57.861 34.615 9.18 0.00 35.39 2.52
3003 6183 8.961294 ATCTGAGAATCTCACAAGGATAAAAG 57.039 34.615 9.18 0.00 35.39 2.27
3004 6184 9.745018 AAATCTGAGAATCTCACAAGGATAAAA 57.255 29.630 9.18 0.00 35.39 1.52
3008 6188 8.156165 GGATAAATCTGAGAATCTCACAAGGAT 58.844 37.037 9.18 7.79 35.39 3.24
3010 6190 7.507829 AGGATAAATCTGAGAATCTCACAAGG 58.492 38.462 9.18 0.00 35.39 3.61
3011 6191 8.961294 AAGGATAAATCTGAGAATCTCACAAG 57.039 34.615 9.18 0.04 35.39 3.16
3077 6286 6.865205 GTCTTTGATTTATGCAATAGGATGCC 59.135 38.462 0.00 0.00 45.83 4.40
3101 6310 1.064825 CTGTGTAAAGGGGGAGGTGT 58.935 55.000 0.00 0.00 0.00 4.16
3107 6316 1.073098 AGGTTCCTGTGTAAAGGGGG 58.927 55.000 0.00 0.00 37.96 5.40
3113 6322 3.904965 TGGTGATACAGGTTCCTGTGTAA 59.095 43.478 28.23 16.17 45.59 2.41
3158 6367 3.690460 ACTCATGTGGGGATTTCTGTTC 58.310 45.455 0.00 0.00 0.00 3.18
3173 6382 7.232330 TGGTTCTCTATCTCATCCTTACTCATG 59.768 40.741 0.00 0.00 0.00 3.07
3334 6547 2.825532 CCCACATTTTGTTACAGAGGGG 59.174 50.000 0.00 0.00 0.00 4.79
3335 6548 3.761897 TCCCACATTTTGTTACAGAGGG 58.238 45.455 0.00 0.00 29.96 4.30
3353 6566 5.914898 AGTTGGCTACAAAAATACATCCC 57.085 39.130 1.24 0.00 38.54 3.85
3396 6609 7.458397 ACAATGATACTCCCTCTGTAACAAAA 58.542 34.615 0.00 0.00 0.00 2.44
3400 6613 6.316390 CCAAACAATGATACTCCCTCTGTAAC 59.684 42.308 0.00 0.00 0.00 2.50
3419 6632 3.254657 GGTAGCAATGTAAGCACCAAACA 59.745 43.478 0.00 0.00 35.03 2.83
3420 6633 3.366985 GGGTAGCAATGTAAGCACCAAAC 60.367 47.826 0.00 0.00 35.94 2.93
3479 6692 2.291089 TGTCAACATGCCCACTGATCAT 60.291 45.455 0.00 0.00 0.00 2.45
3520 6733 5.163269 CCATGATAAGAGAACAGTGGATGGA 60.163 44.000 0.00 0.00 0.00 3.41
3532 6745 4.134563 TGTCGTCGATCCATGATAAGAGA 58.865 43.478 0.00 0.00 0.00 3.10
3574 6787 1.588139 GAATGCGGCAGCTGAATGC 60.588 57.895 20.43 17.53 45.42 3.56
3595 6808 3.313012 TCAGTGGTATTGGACAGAACG 57.687 47.619 0.00 0.00 0.00 3.95
3684 6897 3.678806 CGAGCCTAGAAATGGTTGTGCTA 60.679 47.826 0.00 0.00 0.00 3.49
3723 6936 9.362539 CTGCAAAGCAAAACTGAAATATATCTT 57.637 29.630 0.00 0.00 38.41 2.40
3725 6938 8.693542 ACTGCAAAGCAAAACTGAAATATATC 57.306 30.769 0.00 0.00 38.41 1.63
3730 6943 5.014808 AGACTGCAAAGCAAAACTGAAAT 57.985 34.783 0.00 0.00 38.41 2.17
3734 6947 4.044426 GGTAAGACTGCAAAGCAAAACTG 58.956 43.478 0.00 0.00 38.41 3.16
3788 7001 7.011763 GCTGAGATTCATGTGTATTTGCTTAGA 59.988 37.037 0.00 0.00 0.00 2.10
3789 7002 7.012138 AGCTGAGATTCATGTGTATTTGCTTAG 59.988 37.037 0.00 0.00 0.00 2.18
3799 7012 2.490903 GGCAAAGCTGAGATTCATGTGT 59.509 45.455 0.00 0.00 0.00 3.72
3800 7013 2.477357 CGGCAAAGCTGAGATTCATGTG 60.477 50.000 0.00 0.00 37.02 3.21
3809 7022 0.309922 CATATGCCGGCAAAGCTGAG 59.690 55.000 36.33 15.16 37.02 3.35
3826 7039 8.462016 GCTGAAAATATCTGTTTAGTCCAACAT 58.538 33.333 0.00 0.00 36.08 2.71
3835 7048 6.106877 GCACTCGCTGAAAATATCTGTTTA 57.893 37.500 0.00 0.00 34.30 2.01
3872 7085 3.489229 CGCAAGAACCAGTGAGATATCGA 60.489 47.826 0.00 0.00 43.02 3.59
3893 7106 3.325870 ACCATCATATATTGTCACCGCG 58.674 45.455 0.00 0.00 0.00 6.46
3895 7108 4.514816 TGCAACCATCATATATTGTCACCG 59.485 41.667 0.00 0.00 0.00 4.94
3905 7118 1.696063 GCCACCTGCAACCATCATAT 58.304 50.000 0.00 0.00 40.77 1.78
3941 7154 5.127194 AGAAGTTCACATACGATCCAGCTAA 59.873 40.000 5.50 0.00 0.00 3.09
3949 7162 4.976731 GCGATGTAGAAGTTCACATACGAT 59.023 41.667 23.68 11.09 35.55 3.73
4031 7244 5.948742 TTGGGAAACACTTTCTCCAAAAT 57.051 34.783 11.89 0.00 42.08 1.82
4053 7266 2.101582 GCTGGAGATATCACCTCGTGTT 59.898 50.000 18.54 0.00 34.79 3.32
4063 7276 5.303971 AGCTAATGTGTTGCTGGAGATATC 58.696 41.667 0.00 0.00 35.54 1.63
4075 7288 7.201617 GCCGATTAAGTTTCTAGCTAATGTGTT 60.202 37.037 0.00 0.00 0.00 3.32
4101 7314 3.751175 TGGTACAAGAAAAATCTCTGGCG 59.249 43.478 0.00 0.00 31.92 5.69
4153 7366 9.662947 AACTTAAACACCCATTACTGATAGTAC 57.337 33.333 0.00 0.00 28.93 2.73
4178 7391 2.311463 TCCACATTCGGCCAAAGAAAA 58.689 42.857 2.24 0.00 0.00 2.29
4185 7398 1.138859 CTGACTATCCACATTCGGCCA 59.861 52.381 2.24 0.00 0.00 5.36
4215 7429 3.562182 AGATTTCCACCGGACAAACTTT 58.438 40.909 9.46 0.00 0.00 2.66
4225 7439 4.396166 AGCAATTTGAGTAGATTTCCACCG 59.604 41.667 0.00 0.00 0.00 4.94
4226 7440 5.904362 AGCAATTTGAGTAGATTTCCACC 57.096 39.130 0.00 0.00 0.00 4.61
4227 7441 7.816640 TGTTAGCAATTTGAGTAGATTTCCAC 58.183 34.615 0.00 0.00 0.00 4.02
4257 7471 2.805671 TGCACATGTTAACAAGACTCGG 59.194 45.455 17.18 2.80 0.00 4.63
4258 7472 4.668576 ATGCACATGTTAACAAGACTCG 57.331 40.909 17.18 4.39 0.00 4.18
4259 7473 9.655769 CATAATATGCACATGTTAACAAGACTC 57.344 33.333 17.18 6.37 30.16 3.36
4319 7593 5.357032 ACAAAAAGAGAGGTGTACAAAGGTG 59.643 40.000 0.00 0.00 0.00 4.00
4390 7664 3.841078 CCCCCTTCCACCATCACT 58.159 61.111 0.00 0.00 0.00 3.41
4489 7763 1.604378 CTGACCCTCCATGGTGTCC 59.396 63.158 21.05 8.90 39.24 4.02
4499 7773 0.840722 TTCCCTCAACCCTGACCCTC 60.841 60.000 0.00 0.00 0.00 4.30
4503 7777 1.685820 CCCTTCCCTCAACCCTGAC 59.314 63.158 0.00 0.00 0.00 3.51
4563 7837 5.411669 CGTATATGCTGGTATTTTTCCCCTC 59.588 44.000 0.00 0.00 0.00 4.30
4566 7840 5.048991 CACCGTATATGCTGGTATTTTTCCC 60.049 44.000 6.92 0.00 33.82 3.97
4570 7844 5.043737 ACCACCGTATATGCTGGTATTTT 57.956 39.130 9.79 0.00 35.14 1.82
4572 7846 5.811796 TTACCACCGTATATGCTGGTATT 57.188 39.130 16.54 0.00 38.71 1.89
4573 7847 5.247564 ACATTACCACCGTATATGCTGGTAT 59.752 40.000 16.54 7.40 38.71 2.73
4594 7868 4.265073 GTCTATCTTCAAGTGGGCAACAT 58.735 43.478 0.00 0.00 39.74 2.71
4606 7880 6.040955 AGACAGGCATAAATCGTCTATCTTCA 59.959 38.462 0.00 0.00 35.24 3.02
4617 7891 2.866762 GACCACGAGACAGGCATAAATC 59.133 50.000 0.00 0.00 0.00 2.17
4618 7892 2.501723 AGACCACGAGACAGGCATAAAT 59.498 45.455 0.00 0.00 0.00 1.40
4621 7895 1.103803 GAGACCACGAGACAGGCATA 58.896 55.000 0.00 0.00 0.00 3.14
4646 7925 7.348274 ACTTCTATAGGATTTGTTGATCCCTGA 59.652 37.037 0.00 0.00 45.56 3.86
4647 7926 7.512992 ACTTCTATAGGATTTGTTGATCCCTG 58.487 38.462 0.00 0.00 45.56 4.45
4648 7927 7.570607 AGACTTCTATAGGATTTGTTGATCCCT 59.429 37.037 0.00 0.00 45.56 4.20
4649 7928 7.659390 CAGACTTCTATAGGATTTGTTGATCCC 59.341 40.741 0.00 0.00 45.56 3.85
4650 7929 7.172361 GCAGACTTCTATAGGATTTGTTGATCC 59.828 40.741 0.00 0.00 44.91 3.36
4651 7930 7.712639 TGCAGACTTCTATAGGATTTGTTGATC 59.287 37.037 0.00 0.00 0.00 2.92
4652 7931 7.568349 TGCAGACTTCTATAGGATTTGTTGAT 58.432 34.615 0.00 0.00 0.00 2.57
4653 7932 6.946340 TGCAGACTTCTATAGGATTTGTTGA 58.054 36.000 0.00 0.00 0.00 3.18
4660 7939 6.798427 TCAGTTTGCAGACTTCTATAGGAT 57.202 37.500 7.25 0.00 0.00 3.24
4665 7944 4.883083 TCGTTCAGTTTGCAGACTTCTAT 58.117 39.130 7.25 0.00 0.00 1.98
4667 7946 3.179443 TCGTTCAGTTTGCAGACTTCT 57.821 42.857 7.25 0.00 0.00 2.85
4668 7947 3.846383 GCTTCGTTCAGTTTGCAGACTTC 60.846 47.826 7.25 1.01 0.00 3.01
4692 7971 4.601019 AGAAACACTTGATCTTTTGCGTG 58.399 39.130 0.00 0.00 0.00 5.34
4697 7976 8.744568 AAGAAGAGAGAAACACTTGATCTTTT 57.255 30.769 0.00 0.00 31.34 2.27
4702 7981 7.278875 ACAAGAAGAAGAGAGAAACACTTGAT 58.721 34.615 0.00 0.00 36.67 2.57
4726 8005 5.948992 ACCTAGAAGAGATTTGTGCAAAC 57.051 39.130 0.00 0.00 32.51 2.93
4778 8059 9.747898 TCAGAAAAATAGGCAACCTAGAAATAA 57.252 29.630 0.00 0.00 39.70 1.40
4810 8091 4.479158 TGCTTGGTTAGGGAAAATGAACT 58.521 39.130 0.00 0.00 0.00 3.01
4814 8095 4.383010 GGGAATGCTTGGTTAGGGAAAATG 60.383 45.833 0.00 0.00 0.00 2.32
4815 8096 3.774766 GGGAATGCTTGGTTAGGGAAAAT 59.225 43.478 0.00 0.00 0.00 1.82
4819 8100 1.681229 AGGGAATGCTTGGTTAGGGA 58.319 50.000 0.00 0.00 0.00 4.20
4821 8102 4.402474 CCTAAAAGGGAATGCTTGGTTAGG 59.598 45.833 0.00 0.00 32.71 2.69
4822 8103 4.142160 GCCTAAAAGGGAATGCTTGGTTAG 60.142 45.833 0.00 0.00 35.37 2.34
4823 8104 3.767131 GCCTAAAAGGGAATGCTTGGTTA 59.233 43.478 0.00 0.00 35.37 2.85
4825 8106 2.179427 GCCTAAAAGGGAATGCTTGGT 58.821 47.619 0.00 0.00 35.37 3.67
4826 8107 1.482182 GGCCTAAAAGGGAATGCTTGG 59.518 52.381 0.00 0.00 35.37 3.61
4827 8108 2.428530 GAGGCCTAAAAGGGAATGCTTG 59.571 50.000 4.42 0.00 35.37 4.01
4828 8109 2.624293 GGAGGCCTAAAAGGGAATGCTT 60.624 50.000 4.42 0.00 35.37 3.91
4831 8112 1.064685 ACGGAGGCCTAAAAGGGAATG 60.065 52.381 4.42 0.00 35.37 2.67
4835 8116 1.279846 TGTAACGGAGGCCTAAAAGGG 59.720 52.381 4.42 0.00 35.37 3.95
4836 8117 2.745821 GTTGTAACGGAGGCCTAAAAGG 59.254 50.000 4.42 0.00 38.80 3.11
4837 8118 3.671716 AGTTGTAACGGAGGCCTAAAAG 58.328 45.455 4.42 0.00 0.00 2.27
4838 8119 3.325716 AGAGTTGTAACGGAGGCCTAAAA 59.674 43.478 4.42 0.00 0.00 1.52
4840 8121 2.532843 AGAGTTGTAACGGAGGCCTAA 58.467 47.619 4.42 0.00 0.00 2.69
4841 8122 2.226962 AGAGTTGTAACGGAGGCCTA 57.773 50.000 4.42 0.00 0.00 3.93
4844 8125 3.863142 TTCTAGAGTTGTAACGGAGGC 57.137 47.619 0.00 0.00 0.00 4.70
4846 8127 7.384115 TGAACAATTTCTAGAGTTGTAACGGAG 59.616 37.037 19.68 0.00 35.19 4.63
4847 8128 7.211573 TGAACAATTTCTAGAGTTGTAACGGA 58.788 34.615 19.68 6.01 35.19 4.69
4848 8129 7.360101 CCTGAACAATTTCTAGAGTTGTAACGG 60.360 40.741 19.68 19.07 35.19 4.44
4849 8130 7.384115 TCCTGAACAATTTCTAGAGTTGTAACG 59.616 37.037 19.68 12.95 35.19 3.18
4850 8131 8.603242 TCCTGAACAATTTCTAGAGTTGTAAC 57.397 34.615 19.68 17.10 35.19 2.50
4851 8132 9.052759 GTTCCTGAACAATTTCTAGAGTTGTAA 57.947 33.333 19.68 13.12 40.84 2.41
4917 8282 4.015084 CAAGATCAAAGAGGCTGGAACAT 58.985 43.478 0.00 0.00 38.20 2.71
4922 8287 1.743958 CTGCAAGATCAAAGAGGCTGG 59.256 52.381 0.00 0.00 34.07 4.85
4985 8990 5.236047 GCTATTTGATCGCATTCAGAGAGTT 59.764 40.000 0.00 0.00 0.00 3.01
4987 8992 4.152045 GGCTATTTGATCGCATTCAGAGAG 59.848 45.833 0.00 0.00 0.00 3.20
4988 8993 4.060900 GGCTATTTGATCGCATTCAGAGA 58.939 43.478 0.00 0.00 0.00 3.10
4989 8994 4.063689 AGGCTATTTGATCGCATTCAGAG 58.936 43.478 0.00 0.00 0.00 3.35
4990 8995 4.077300 AGGCTATTTGATCGCATTCAGA 57.923 40.909 0.00 0.00 0.00 3.27
4991 8996 4.825546 AAGGCTATTTGATCGCATTCAG 57.174 40.909 0.00 0.00 0.00 3.02
4992 8997 5.764686 ACATAAGGCTATTTGATCGCATTCA 59.235 36.000 0.00 0.00 0.00 2.57
4993 8998 6.246420 ACATAAGGCTATTTGATCGCATTC 57.754 37.500 0.00 0.00 0.00 2.67
4994 8999 6.441274 CAACATAAGGCTATTTGATCGCATT 58.559 36.000 0.00 0.00 0.00 3.56
4995 9000 5.563475 GCAACATAAGGCTATTTGATCGCAT 60.563 40.000 0.00 0.00 0.00 4.73
4996 9001 4.261155 GCAACATAAGGCTATTTGATCGCA 60.261 41.667 0.00 0.00 0.00 5.10
4997 9002 4.023707 AGCAACATAAGGCTATTTGATCGC 60.024 41.667 0.00 0.00 38.90 4.58
4998 9003 5.446709 CAGCAACATAAGGCTATTTGATCG 58.553 41.667 0.00 0.00 38.56 3.69
4999 9004 5.218139 GCAGCAACATAAGGCTATTTGATC 58.782 41.667 0.00 0.00 38.56 2.92
5000 9005 4.261322 CGCAGCAACATAAGGCTATTTGAT 60.261 41.667 0.00 0.00 38.56 2.57
5001 9006 3.065233 CGCAGCAACATAAGGCTATTTGA 59.935 43.478 0.00 0.00 38.56 2.69
5002 9007 3.365832 CGCAGCAACATAAGGCTATTTG 58.634 45.455 0.00 0.00 38.56 2.32
5003 9008 2.358898 CCGCAGCAACATAAGGCTATTT 59.641 45.455 0.00 0.00 38.56 1.40
5004 9009 1.949525 CCGCAGCAACATAAGGCTATT 59.050 47.619 0.00 0.00 38.56 1.73
5005 9010 1.597742 CCGCAGCAACATAAGGCTAT 58.402 50.000 0.00 0.00 38.56 2.97
5006 9011 0.463654 CCCGCAGCAACATAAGGCTA 60.464 55.000 0.00 0.00 38.56 3.93
5007 9012 1.750399 CCCGCAGCAACATAAGGCT 60.750 57.895 0.00 0.00 42.06 4.58
5008 9013 1.312371 TTCCCGCAGCAACATAAGGC 61.312 55.000 0.00 0.00 0.00 4.35
5009 9014 1.173043 TTTCCCGCAGCAACATAAGG 58.827 50.000 0.00 0.00 0.00 2.69
5010 9015 3.119531 TCAATTTCCCGCAGCAACATAAG 60.120 43.478 0.00 0.00 0.00 1.73
5011 9016 2.822561 TCAATTTCCCGCAGCAACATAA 59.177 40.909 0.00 0.00 0.00 1.90
5012 9017 2.441410 TCAATTTCCCGCAGCAACATA 58.559 42.857 0.00 0.00 0.00 2.29
5013 9018 1.255882 TCAATTTCCCGCAGCAACAT 58.744 45.000 0.00 0.00 0.00 2.71
5014 9019 1.202114 GATCAATTTCCCGCAGCAACA 59.798 47.619 0.00 0.00 0.00 3.33
5015 9020 1.469767 GGATCAATTTCCCGCAGCAAC 60.470 52.381 0.00 0.00 0.00 4.17
5016 9021 0.817013 GGATCAATTTCCCGCAGCAA 59.183 50.000 0.00 0.00 0.00 3.91
5017 9022 1.375853 CGGATCAATTTCCCGCAGCA 61.376 55.000 0.00 0.00 36.62 4.41
5018 9023 1.356624 CGGATCAATTTCCCGCAGC 59.643 57.895 0.00 0.00 36.62 5.25
5022 9027 0.378257 CTGTGCGGATCAATTTCCCG 59.622 55.000 0.00 0.00 45.51 5.14
5023 9028 0.101219 GCTGTGCGGATCAATTTCCC 59.899 55.000 0.00 0.00 31.61 3.97
5024 9029 0.810648 TGCTGTGCGGATCAATTTCC 59.189 50.000 0.00 0.00 0.00 3.13
5025 9030 1.468054 GGTGCTGTGCGGATCAATTTC 60.468 52.381 0.00 0.00 0.00 2.17
5026 9031 0.527565 GGTGCTGTGCGGATCAATTT 59.472 50.000 0.00 0.00 0.00 1.82
5027 9032 0.608856 TGGTGCTGTGCGGATCAATT 60.609 50.000 0.00 0.00 0.00 2.32
5028 9033 1.002257 TGGTGCTGTGCGGATCAAT 60.002 52.632 0.00 0.00 0.00 2.57
5029 9034 1.965930 GTGGTGCTGTGCGGATCAA 60.966 57.895 0.00 0.00 0.00 2.57
5030 9035 2.358615 GTGGTGCTGTGCGGATCA 60.359 61.111 0.00 0.00 0.00 2.92
5031 9036 2.358615 TGTGGTGCTGTGCGGATC 60.359 61.111 0.00 0.00 0.00 3.36
5032 9037 2.189191 ATCTGTGGTGCTGTGCGGAT 62.189 55.000 0.00 0.00 0.00 4.18
5033 9038 2.395988 AATCTGTGGTGCTGTGCGGA 62.396 55.000 0.00 0.00 0.00 5.54
5034 9039 1.915614 GAATCTGTGGTGCTGTGCGG 61.916 60.000 0.00 0.00 0.00 5.69
5035 9040 1.499056 GAATCTGTGGTGCTGTGCG 59.501 57.895 0.00 0.00 0.00 5.34
5036 9041 0.607489 AGGAATCTGTGGTGCTGTGC 60.607 55.000 0.00 0.00 0.00 4.57
5037 9042 1.271001 TGAGGAATCTGTGGTGCTGTG 60.271 52.381 0.00 0.00 0.00 3.66
5038 9043 1.059098 TGAGGAATCTGTGGTGCTGT 58.941 50.000 0.00 0.00 0.00 4.40
5039 9044 2.414994 ATGAGGAATCTGTGGTGCTG 57.585 50.000 0.00 0.00 0.00 4.41
5040 9045 2.619849 CCAATGAGGAATCTGTGGTGCT 60.620 50.000 0.00 0.00 41.22 4.40
5041 9046 1.747355 CCAATGAGGAATCTGTGGTGC 59.253 52.381 0.00 0.00 41.22 5.01
5042 9047 3.354948 TCCAATGAGGAATCTGTGGTG 57.645 47.619 0.00 0.00 45.65 4.17
5068 9073 4.631813 GGTGTTAGTTGTCAGGCTATTCAG 59.368 45.833 0.00 0.00 0.00 3.02
5069 9074 4.286032 AGGTGTTAGTTGTCAGGCTATTCA 59.714 41.667 0.00 0.00 0.00 2.57
5070 9075 4.833390 AGGTGTTAGTTGTCAGGCTATTC 58.167 43.478 0.00 0.00 0.00 1.75
5071 9076 4.910458 AGGTGTTAGTTGTCAGGCTATT 57.090 40.909 0.00 0.00 0.00 1.73
5072 9077 6.368779 TTTAGGTGTTAGTTGTCAGGCTAT 57.631 37.500 0.00 0.00 0.00 2.97
5073 9078 5.811796 TTTAGGTGTTAGTTGTCAGGCTA 57.188 39.130 0.00 0.00 0.00 3.93
5074 9079 4.699925 TTTAGGTGTTAGTTGTCAGGCT 57.300 40.909 0.00 0.00 0.00 4.58
5075 9080 5.959618 AATTTAGGTGTTAGTTGTCAGGC 57.040 39.130 0.00 0.00 0.00 4.85
5079 9084 9.135843 GCCAAATTAATTTAGGTGTTAGTTGTC 57.864 33.333 12.98 0.00 0.00 3.18
5080 9085 8.866093 AGCCAAATTAATTTAGGTGTTAGTTGT 58.134 29.630 12.98 0.00 0.00 3.32
5081 9086 9.139174 CAGCCAAATTAATTTAGGTGTTAGTTG 57.861 33.333 22.44 5.96 34.03 3.16
5082 9087 9.084533 TCAGCCAAATTAATTTAGGTGTTAGTT 57.915 29.630 26.57 0.00 37.84 2.24
5083 9088 8.520351 GTCAGCCAAATTAATTTAGGTGTTAGT 58.480 33.333 26.57 0.00 37.84 2.24
5084 9089 7.973944 GGTCAGCCAAATTAATTTAGGTGTTAG 59.026 37.037 26.57 10.90 37.84 2.34
5085 9090 7.451877 TGGTCAGCCAAATTAATTTAGGTGTTA 59.548 33.333 26.57 16.63 42.83 2.41
5086 9091 6.268847 TGGTCAGCCAAATTAATTTAGGTGTT 59.731 34.615 26.57 13.30 42.83 3.32
5087 9092 5.777732 TGGTCAGCCAAATTAATTTAGGTGT 59.222 36.000 26.57 14.42 42.83 4.16
5088 9093 6.152661 TCTGGTCAGCCAAATTAATTTAGGTG 59.847 38.462 23.87 23.87 45.51 4.00
5089 9094 6.252995 TCTGGTCAGCCAAATTAATTTAGGT 58.747 36.000 12.98 8.99 45.51 3.08
5090 9095 6.773976 TCTGGTCAGCCAAATTAATTTAGG 57.226 37.500 12.98 16.01 45.51 2.69
5093 9098 8.815912 AGTATTTCTGGTCAGCCAAATTAATTT 58.184 29.630 7.64 7.64 45.51 1.82
5094 9099 8.366359 AGTATTTCTGGTCAGCCAAATTAATT 57.634 30.769 0.00 0.00 45.51 1.40
5095 9100 7.961326 AGTATTTCTGGTCAGCCAAATTAAT 57.039 32.000 3.92 0.00 45.51 1.40
5096 9101 8.871629 TTAGTATTTCTGGTCAGCCAAATTAA 57.128 30.769 3.92 0.00 45.51 1.40
5098 9103 7.961326 ATTAGTATTTCTGGTCAGCCAAATT 57.039 32.000 3.92 0.00 45.51 1.82
5099 9104 8.275040 AGTATTAGTATTTCTGGTCAGCCAAAT 58.725 33.333 0.00 0.00 45.51 2.32
5100 9105 7.630082 AGTATTAGTATTTCTGGTCAGCCAAA 58.370 34.615 0.00 0.00 45.51 3.28
5101 9106 7.195374 AGTATTAGTATTTCTGGTCAGCCAA 57.805 36.000 0.00 0.00 45.51 4.52
5102 9107 6.808321 AGTATTAGTATTTCTGGTCAGCCA 57.192 37.500 0.00 0.00 43.73 4.75
5103 9108 8.422566 AGTTAGTATTAGTATTTCTGGTCAGCC 58.577 37.037 0.00 0.00 0.00 4.85
5104 9109 9.465985 GAGTTAGTATTAGTATTTCTGGTCAGC 57.534 37.037 0.00 0.00 0.00 4.26
5105 9110 9.968870 GGAGTTAGTATTAGTATTTCTGGTCAG 57.031 37.037 0.00 0.00 0.00 3.51
5106 9111 8.921205 GGGAGTTAGTATTAGTATTTCTGGTCA 58.079 37.037 0.00 0.00 0.00 4.02
5107 9112 8.921205 TGGGAGTTAGTATTAGTATTTCTGGTC 58.079 37.037 0.00 0.00 0.00 4.02
5108 9113 8.849543 TGGGAGTTAGTATTAGTATTTCTGGT 57.150 34.615 0.00 0.00 0.00 4.00
5114 9119 9.914834 TGCAATTTGGGAGTTAGTATTAGTATT 57.085 29.630 0.00 0.00 0.00 1.89
5115 9120 9.338622 GTGCAATTTGGGAGTTAGTATTAGTAT 57.661 33.333 0.00 0.00 0.00 2.12
5116 9121 7.771826 GGTGCAATTTGGGAGTTAGTATTAGTA 59.228 37.037 0.00 0.00 0.00 1.82
5117 9122 6.602009 GGTGCAATTTGGGAGTTAGTATTAGT 59.398 38.462 0.00 0.00 0.00 2.24
5118 9123 6.601613 TGGTGCAATTTGGGAGTTAGTATTAG 59.398 38.462 0.00 0.00 0.00 1.73
5119 9124 6.486056 TGGTGCAATTTGGGAGTTAGTATTA 58.514 36.000 0.00 0.00 0.00 0.98
5120 9125 5.329399 TGGTGCAATTTGGGAGTTAGTATT 58.671 37.500 0.00 0.00 0.00 1.89
5121 9126 4.929479 TGGTGCAATTTGGGAGTTAGTAT 58.071 39.130 0.00 0.00 0.00 2.12
5122 9127 4.374689 TGGTGCAATTTGGGAGTTAGTA 57.625 40.909 0.00 0.00 0.00 1.82
5123 9128 3.237268 TGGTGCAATTTGGGAGTTAGT 57.763 42.857 0.00 0.00 0.00 2.24
5124 9129 3.763360 TGATGGTGCAATTTGGGAGTTAG 59.237 43.478 0.00 0.00 0.00 2.34
5125 9130 3.772387 TGATGGTGCAATTTGGGAGTTA 58.228 40.909 0.00 0.00 0.00 2.24
5126 9131 2.607499 TGATGGTGCAATTTGGGAGTT 58.393 42.857 0.00 0.00 0.00 3.01
5127 9132 2.299867 GTTGATGGTGCAATTTGGGAGT 59.700 45.455 0.00 0.00 0.00 3.85
5128 9133 2.299582 TGTTGATGGTGCAATTTGGGAG 59.700 45.455 0.00 0.00 0.00 4.30
5129 9134 2.036992 GTGTTGATGGTGCAATTTGGGA 59.963 45.455 0.00 0.00 0.00 4.37
5130 9135 2.037511 AGTGTTGATGGTGCAATTTGGG 59.962 45.455 0.00 0.00 0.00 4.12
5131 9136 3.389925 AGTGTTGATGGTGCAATTTGG 57.610 42.857 0.00 0.00 0.00 3.28
5132 9137 4.024725 CCAAAGTGTTGATGGTGCAATTTG 60.025 41.667 8.94 8.94 43.40 2.32
5133 9138 4.128643 CCAAAGTGTTGATGGTGCAATTT 58.871 39.130 0.00 0.00 36.83 1.82
5134 9139 3.494749 CCCAAAGTGTTGATGGTGCAATT 60.495 43.478 0.00 0.00 36.83 2.32
5135 9140 2.037511 CCCAAAGTGTTGATGGTGCAAT 59.962 45.455 0.00 0.00 36.83 3.56
5136 9141 1.411977 CCCAAAGTGTTGATGGTGCAA 59.588 47.619 0.00 0.00 36.83 4.08
5137 9142 1.039068 CCCAAAGTGTTGATGGTGCA 58.961 50.000 0.00 0.00 36.83 4.57
5138 9143 1.327303 TCCCAAAGTGTTGATGGTGC 58.673 50.000 0.00 0.00 36.83 5.01
5139 9144 4.370917 CTTTTCCCAAAGTGTTGATGGTG 58.629 43.478 0.00 0.00 36.83 4.17
5140 9145 3.181466 GCTTTTCCCAAAGTGTTGATGGT 60.181 43.478 0.00 0.00 41.51 3.55
5141 9146 3.181467 TGCTTTTCCCAAAGTGTTGATGG 60.181 43.478 0.00 0.00 41.51 3.51
5142 9147 3.803778 GTGCTTTTCCCAAAGTGTTGATG 59.196 43.478 0.00 0.00 41.51 3.07
5143 9148 3.450457 TGTGCTTTTCCCAAAGTGTTGAT 59.550 39.130 0.00 0.00 41.51 2.57
5144 9149 2.828520 TGTGCTTTTCCCAAAGTGTTGA 59.171 40.909 0.00 0.00 41.51 3.18
5145 9150 3.244033 TGTGCTTTTCCCAAAGTGTTG 57.756 42.857 0.00 0.00 41.51 3.33
5146 9151 3.971245 TTGTGCTTTTCCCAAAGTGTT 57.029 38.095 0.00 0.00 41.51 3.32
5147 9152 3.369366 CCTTTGTGCTTTTCCCAAAGTGT 60.369 43.478 9.66 0.00 42.08 3.55
5148 9153 3.118811 TCCTTTGTGCTTTTCCCAAAGTG 60.119 43.478 9.66 3.33 42.08 3.16
5149 9154 3.103742 TCCTTTGTGCTTTTCCCAAAGT 58.896 40.909 9.66 0.00 42.08 2.66
5150 9155 3.817709 TCCTTTGTGCTTTTCCCAAAG 57.182 42.857 0.00 0.00 42.86 2.77
5151 9156 4.163078 TCATTCCTTTGTGCTTTTCCCAAA 59.837 37.500 0.00 0.00 0.00 3.28
5152 9157 3.708631 TCATTCCTTTGTGCTTTTCCCAA 59.291 39.130 0.00 0.00 0.00 4.12
5153 9158 3.303938 TCATTCCTTTGTGCTTTTCCCA 58.696 40.909 0.00 0.00 0.00 4.37
5154 9159 3.573967 TCTCATTCCTTTGTGCTTTTCCC 59.426 43.478 0.00 0.00 0.00 3.97
5155 9160 4.853924 TCTCATTCCTTTGTGCTTTTCC 57.146 40.909 0.00 0.00 0.00 3.13
5156 9161 6.071952 TGGTATCTCATTCCTTTGTGCTTTTC 60.072 38.462 0.00 0.00 0.00 2.29
5157 9162 5.774690 TGGTATCTCATTCCTTTGTGCTTTT 59.225 36.000 0.00 0.00 0.00 2.27
5158 9163 5.324409 TGGTATCTCATTCCTTTGTGCTTT 58.676 37.500 0.00 0.00 0.00 3.51
5159 9164 4.922206 TGGTATCTCATTCCTTTGTGCTT 58.078 39.130 0.00 0.00 0.00 3.91
5160 9165 4.574674 TGGTATCTCATTCCTTTGTGCT 57.425 40.909 0.00 0.00 0.00 4.40
5161 9166 4.641989 ACATGGTATCTCATTCCTTTGTGC 59.358 41.667 0.00 0.00 0.00 4.57
5162 9167 7.050377 AGTACATGGTATCTCATTCCTTTGTG 58.950 38.462 0.00 0.00 0.00 3.33
5163 9168 7.200434 AGTACATGGTATCTCATTCCTTTGT 57.800 36.000 0.00 0.00 0.00 2.83
5164 9169 7.657761 GGTAGTACATGGTATCTCATTCCTTTG 59.342 40.741 2.06 0.00 0.00 2.77
5165 9170 7.569111 AGGTAGTACATGGTATCTCATTCCTTT 59.431 37.037 2.06 0.00 0.00 3.11
5166 9171 7.076446 AGGTAGTACATGGTATCTCATTCCTT 58.924 38.462 2.06 0.00 0.00 3.36
5167 9172 6.625267 AGGTAGTACATGGTATCTCATTCCT 58.375 40.000 2.06 0.00 0.00 3.36
5168 9173 6.071278 GGAGGTAGTACATGGTATCTCATTCC 60.071 46.154 12.01 0.41 29.20 3.01
5169 9174 6.349445 CGGAGGTAGTACATGGTATCTCATTC 60.349 46.154 12.01 0.00 29.20 2.67
5170 9175 5.477291 CGGAGGTAGTACATGGTATCTCATT 59.523 44.000 12.01 0.00 29.20 2.57
5171 9176 5.010933 CGGAGGTAGTACATGGTATCTCAT 58.989 45.833 12.01 0.00 29.20 2.90
5172 9177 4.141321 ACGGAGGTAGTACATGGTATCTCA 60.141 45.833 12.01 0.00 29.20 3.27
5173 9178 4.396522 ACGGAGGTAGTACATGGTATCTC 58.603 47.826 2.06 0.83 0.00 2.75
5174 9179 4.104420 AGACGGAGGTAGTACATGGTATCT 59.896 45.833 2.06 0.00 0.00 1.98
5175 9180 4.396522 AGACGGAGGTAGTACATGGTATC 58.603 47.826 2.06 0.00 0.00 2.24
5176 9181 4.396522 GAGACGGAGGTAGTACATGGTAT 58.603 47.826 2.06 0.00 0.00 2.73
5177 9182 3.434167 GGAGACGGAGGTAGTACATGGTA 60.434 52.174 2.06 0.00 0.00 3.25
5178 9183 2.652590 GAGACGGAGGTAGTACATGGT 58.347 52.381 2.06 0.00 0.00 3.55
5179 9184 1.955080 GGAGACGGAGGTAGTACATGG 59.045 57.143 2.06 0.00 0.00 3.66
5180 9185 1.955080 GGGAGACGGAGGTAGTACATG 59.045 57.143 2.06 0.00 0.00 3.21
5181 9186 1.567649 TGGGAGACGGAGGTAGTACAT 59.432 52.381 2.06 0.00 0.00 2.29
5182 9187 0.994247 TGGGAGACGGAGGTAGTACA 59.006 55.000 2.06 0.00 0.00 2.90
5183 9188 2.134789 TTGGGAGACGGAGGTAGTAC 57.865 55.000 0.00 0.00 0.00 2.73
5184 9189 2.905415 TTTGGGAGACGGAGGTAGTA 57.095 50.000 0.00 0.00 0.00 1.82
5185 9190 1.900486 CTTTTGGGAGACGGAGGTAGT 59.100 52.381 0.00 0.00 0.00 2.73
5186 9191 2.176889 TCTTTTGGGAGACGGAGGTAG 58.823 52.381 0.00 0.00 0.00 3.18
5187 9192 2.314071 TCTTTTGGGAGACGGAGGTA 57.686 50.000 0.00 0.00 0.00 3.08
5188 9193 1.348036 CTTCTTTTGGGAGACGGAGGT 59.652 52.381 0.00 0.00 0.00 3.85
5189 9194 1.339151 CCTTCTTTTGGGAGACGGAGG 60.339 57.143 0.00 0.00 37.27 4.30
5217 9222 7.202016 TGCATCGTTTGACTTAAGAGAAAAT 57.798 32.000 10.09 0.00 0.00 1.82
5226 9232 7.921214 TGGTTAAATTTTGCATCGTTTGACTTA 59.079 29.630 0.00 2.47 0.00 2.24
5229 9235 6.517914 TGGTTAAATTTTGCATCGTTTGAC 57.482 33.333 0.00 0.00 0.00 3.18
5374 9570 5.649395 TCAAATGGTGCAAATTTTGACCAAA 59.351 32.000 24.35 14.42 41.09 3.28
5376 9572 4.574013 GTCAAATGGTGCAAATTTTGACCA 59.426 37.500 24.89 23.51 46.14 4.02
5380 9576 4.744137 TCGAGTCAAATGGTGCAAATTTTG 59.256 37.500 4.72 4.72 0.00 2.44
5382 9578 4.582701 TCGAGTCAAATGGTGCAAATTT 57.417 36.364 3.37 3.37 0.00 1.82
5383 9579 4.789012 ATCGAGTCAAATGGTGCAAATT 57.211 36.364 0.00 0.00 0.00 1.82
5384 9580 4.699735 TGTATCGAGTCAAATGGTGCAAAT 59.300 37.500 0.00 0.00 0.00 2.32
5387 9583 3.326836 TGTATCGAGTCAAATGGTGCA 57.673 42.857 0.00 0.00 0.00 4.57
5388 9584 4.678509 TTTGTATCGAGTCAAATGGTGC 57.321 40.909 11.86 0.00 0.00 5.01
5389 9585 6.241207 ACTTTTGTATCGAGTCAAATGGTG 57.759 37.500 22.22 14.33 34.92 4.17
5390 9586 6.877611 AACTTTTGTATCGAGTCAAATGGT 57.122 33.333 22.22 17.72 34.92 3.55
5397 9594 9.694137 ATAGGCTTATAACTTTTGTATCGAGTC 57.306 33.333 0.00 0.00 0.00 3.36
5431 9628 9.983804 GTTTATAGGAAATTTGGAGAACTAACG 57.016 33.333 0.00 0.00 0.00 3.18
5437 9634 7.475299 AGGTGGTTTATAGGAAATTTGGAGAA 58.525 34.615 0.00 0.00 0.00 2.87


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.