Multiple sequence alignment - TraesCS5D01G197600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G197600 chr5D 100.000 6256 0 0 1 6256 300941677 300935422 0.000000e+00 11553
1 TraesCS5D01G197600 chr5D 95.961 4630 131 17 1042 5653 301095294 301099885 0.000000e+00 7463
2 TraesCS5D01G197600 chr5D 92.453 795 46 10 1 786 301002146 301002935 0.000000e+00 1123
3 TraesCS5D01G197600 chr5A 95.746 4255 141 12 858 5101 398264026 398268251 0.000000e+00 6818
4 TraesCS5D01G197600 chr5A 88.308 804 60 13 1 791 398254776 398255558 0.000000e+00 933
5 TraesCS5D01G197600 chr5A 89.809 471 17 15 5100 5567 398268361 398268803 5.440000e-160 575
6 TraesCS5D01G197600 chr5A 84.314 153 19 2 5844 5991 130540665 130540513 1.820000e-30 145
7 TraesCS5D01G197600 chr5B 94.853 4119 134 31 823 4924 344291749 344295806 0.000000e+00 6360
8 TraesCS5D01G197600 chr5B 90.125 881 62 11 4922 5784 344295870 344296743 0.000000e+00 1122
9 TraesCS5D01G197600 chr2D 86.275 153 16 3 5844 5991 241661894 241662046 1.800000e-35 161
10 TraesCS5D01G197600 chr2D 86.275 153 16 2 5844 5991 410600673 410600825 1.800000e-35 161
11 TraesCS5D01G197600 chr2D 84.967 153 17 3 5844 5991 221650738 221650889 3.910000e-32 150
12 TraesCS5D01G197600 chr7D 84.615 156 18 3 5844 5993 454079230 454079075 3.910000e-32 150
13 TraesCS5D01G197600 chr7B 85.235 149 16 3 5843 5985 437669565 437669713 1.410000e-31 148
14 TraesCS5D01G197600 chr1D 84.868 152 17 5 5844 5991 450454971 450454822 1.410000e-31 148
15 TraesCS5D01G197600 chr2A 84.314 153 19 2 5844 5991 310408903 310409055 1.820000e-30 145
16 TraesCS5D01G197600 chr7A 83.544 158 20 3 5842 5993 579808529 579808372 6.540000e-30 143
17 TraesCS5D01G197600 chr7A 81.699 153 22 3 1767 1919 722274334 722274480 8.520000e-24 122
18 TraesCS5D01G197600 chr3A 80.357 168 25 5 1767 1933 174379441 174379281 3.060000e-23 121
19 TraesCS5D01G197600 chrUn 95.652 46 2 0 2262 2307 217898094 217898139 2.420000e-09 75
20 TraesCS5D01G197600 chrUn 95.652 46 2 0 2262 2307 335930454 335930499 2.420000e-09 75
21 TraesCS5D01G197600 chr6D 95.652 46 2 0 2262 2307 411600752 411600707 2.420000e-09 75
22 TraesCS5D01G197600 chr6A 95.652 46 2 0 2262 2307 84427642 84427597 2.420000e-09 75
23 TraesCS5D01G197600 chr6A 95.652 46 2 0 2262 2307 597243143 597243188 2.420000e-09 75
24 TraesCS5D01G197600 chr4D 95.652 46 2 0 2262 2307 87364166 87364211 2.420000e-09 75


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G197600 chr5D 300935422 300941677 6255 True 11553.0 11553 100.0000 1 6256 1 chr5D.!!$R1 6255
1 TraesCS5D01G197600 chr5D 301095294 301099885 4591 False 7463.0 7463 95.9610 1042 5653 1 chr5D.!!$F2 4611
2 TraesCS5D01G197600 chr5D 301002146 301002935 789 False 1123.0 1123 92.4530 1 786 1 chr5D.!!$F1 785
3 TraesCS5D01G197600 chr5A 398264026 398268803 4777 False 3696.5 6818 92.7775 858 5567 2 chr5A.!!$F2 4709
4 TraesCS5D01G197600 chr5A 398254776 398255558 782 False 933.0 933 88.3080 1 791 1 chr5A.!!$F1 790
5 TraesCS5D01G197600 chr5B 344291749 344296743 4994 False 3741.0 6360 92.4890 823 5784 2 chr5B.!!$F1 4961

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
961 984 0.613777 GTTTCGTCATCTCCCCACCT 59.386 55.0 0.00 0.0 0.00 4.00 F
962 985 0.902531 TTTCGTCATCTCCCCACCTC 59.097 55.0 0.00 0.0 0.00 3.85 F
2770 2800 0.322277 CCTGTGGATGCTGACTTGCT 60.322 55.0 0.00 0.0 0.00 3.91 F
2775 2805 0.034670 GGATGCTGACTTGCTTCCCT 60.035 55.0 9.40 0.0 45.76 4.20 F
2780 2810 0.397941 CTGACTTGCTTCCCTGTGGA 59.602 55.0 0.00 0.0 39.54 4.02 F
3702 3739 0.679002 GCCAGGCTCAAAGCATCAGA 60.679 55.0 3.29 0.0 44.75 3.27 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1842 1865 0.035458 AGCTTACACTGCTTCGCCTT 59.965 50.00 0.00 0.0 37.52 4.35 R
2773 2803 0.322277 AGCAAGTCAGCATCCACAGG 60.322 55.00 0.00 0.0 36.85 4.00 R
4429 4469 1.901591 CAATGAGCACACCTCCACTT 58.098 50.00 0.00 0.0 39.98 3.16 R
4687 4727 2.070262 TGTGTCGCAGAACTGAGATG 57.930 50.00 10.92 0.0 41.22 2.90 R
4764 4804 9.912634 CAAGAAGAGCTAACATGGAAAAATTAA 57.087 29.63 0.00 0.0 0.00 1.40 R
5563 5794 0.181587 TTCCGAAGAAACACCAGCCA 59.818 50.00 0.00 0.0 0.00 4.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
71 72 4.038402 GTGGGCACGTACCATAGTACTATT 59.962 45.833 12.87 2.61 45.68 1.73
127 131 1.761784 CCCTCTGAGGTGGATGAGAAG 59.238 57.143 21.70 0.00 31.93 2.85
128 132 2.625352 CCCTCTGAGGTGGATGAGAAGA 60.625 54.545 21.70 0.00 31.93 2.87
129 133 3.102972 CCTCTGAGGTGGATGAGAAGAA 58.897 50.000 15.76 0.00 0.00 2.52
178 182 5.916661 ATCGCTAGGGATACAATTATCGT 57.083 39.130 19.93 0.00 35.75 3.73
277 281 3.553917 GCTCTCCAAATAGAAGCGAAGAC 59.446 47.826 0.00 0.00 0.00 3.01
301 305 6.096423 ACAAGTAACAAAGAGGAAGGAAAACC 59.904 38.462 0.00 0.00 0.00 3.27
498 503 8.565896 AATCTTCCCCAAAATTTTAGAAATGC 57.434 30.769 2.44 0.00 0.00 3.56
502 507 6.026186 TCCCCAAAATTTTAGAAATGCCCTA 58.974 36.000 2.44 0.00 0.00 3.53
538 551 5.633830 TGCTCAGAAAACATTTCCAGATC 57.366 39.130 0.00 0.00 0.00 2.75
555 568 4.507335 CCAGATCTCAAAAGAACTTCCCCA 60.507 45.833 0.00 0.00 32.72 4.96
563 576 6.951971 TCAAAAGAACTTCCCCAAATTTCAA 58.048 32.000 0.00 0.00 30.90 2.69
572 587 7.289310 ACTTCCCCAAATTTCAAAATGTTCAT 58.711 30.769 0.00 0.00 0.00 2.57
626 641 7.692908 ATGTTCACGGTTTTAAAGATTTGTG 57.307 32.000 0.00 0.00 0.00 3.33
664 679 2.690778 GCCACATTCACCTGCGGAC 61.691 63.158 0.00 0.00 0.00 4.79
791 808 8.454570 AGGAGCTTAGTAGTGACTTAAGATAC 57.545 38.462 10.09 7.56 37.10 2.24
792 809 8.276477 AGGAGCTTAGTAGTGACTTAAGATACT 58.724 37.037 10.09 14.23 37.10 2.12
793 810 8.905850 GGAGCTTAGTAGTGACTTAAGATACTT 58.094 37.037 10.09 2.10 37.10 2.24
794 811 9.724839 GAGCTTAGTAGTGACTTAAGATACTTG 57.275 37.037 10.09 8.89 37.10 3.16
795 812 9.245481 AGCTTAGTAGTGACTTAAGATACTTGT 57.755 33.333 10.09 6.28 37.10 3.16
796 813 9.505995 GCTTAGTAGTGACTTAAGATACTTGTC 57.494 37.037 10.09 7.19 37.10 3.18
798 815 9.524496 TTAGTAGTGACTTAAGATACTTGTCCA 57.476 33.333 10.09 0.00 37.10 4.02
799 816 8.057536 AGTAGTGACTTAAGATACTTGTCCAG 57.942 38.462 10.09 0.00 28.61 3.86
800 817 7.889073 AGTAGTGACTTAAGATACTTGTCCAGA 59.111 37.037 10.09 0.00 28.61 3.86
801 818 7.726033 AGTGACTTAAGATACTTGTCCAGAT 57.274 36.000 10.09 0.00 0.00 2.90
802 819 8.140112 AGTGACTTAAGATACTTGTCCAGATT 57.860 34.615 10.09 0.00 0.00 2.40
803 820 9.256228 AGTGACTTAAGATACTTGTCCAGATTA 57.744 33.333 10.09 0.00 0.00 1.75
804 821 9.522804 GTGACTTAAGATACTTGTCCAGATTAG 57.477 37.037 10.09 0.00 0.00 1.73
805 822 8.696374 TGACTTAAGATACTTGTCCAGATTAGG 58.304 37.037 10.09 0.00 0.00 2.69
806 823 8.840200 ACTTAAGATACTTGTCCAGATTAGGA 57.160 34.615 10.09 0.00 34.64 2.94
807 824 8.919145 ACTTAAGATACTTGTCCAGATTAGGAG 58.081 37.037 10.09 0.00 38.64 3.69
808 825 6.739331 AAGATACTTGTCCAGATTAGGAGG 57.261 41.667 0.00 0.00 38.64 4.30
809 826 6.031964 AGATACTTGTCCAGATTAGGAGGA 57.968 41.667 0.00 0.00 38.64 3.71
810 827 6.074648 AGATACTTGTCCAGATTAGGAGGAG 58.925 44.000 0.00 0.00 38.64 3.69
811 828 3.379452 ACTTGTCCAGATTAGGAGGAGG 58.621 50.000 0.00 0.00 38.64 4.30
812 829 3.246167 ACTTGTCCAGATTAGGAGGAGGT 60.246 47.826 0.00 0.00 38.64 3.85
813 830 3.491766 TGTCCAGATTAGGAGGAGGTT 57.508 47.619 0.00 0.00 38.64 3.50
814 831 3.107601 TGTCCAGATTAGGAGGAGGTTG 58.892 50.000 0.00 0.00 38.64 3.77
815 832 3.245984 TGTCCAGATTAGGAGGAGGTTGA 60.246 47.826 0.00 0.00 38.64 3.18
816 833 3.133183 GTCCAGATTAGGAGGAGGTTGAC 59.867 52.174 0.00 0.00 38.64 3.18
817 834 2.436173 CCAGATTAGGAGGAGGTTGACC 59.564 54.545 0.00 0.00 0.00 4.02
818 835 6.134089 TCCAGATTAGGAGGAGGTTGACCT 62.134 50.000 1.47 1.47 40.23 3.85
819 836 6.838352 TCCAGATTAGGAGGAGGTTGACCTA 61.838 48.000 1.96 0.00 38.72 3.08
820 837 8.086146 TCCAGATTAGGAGGAGGTTGACCTAT 62.086 46.154 1.96 0.00 38.72 2.57
821 838 8.813372 TCCAGATTAGGAGGAGGTTGACCTATA 61.813 44.444 1.96 0.00 38.72 1.31
851 868 8.662781 ATTTTCTTTCTTTAGCAAAAAGGACC 57.337 30.769 10.58 0.00 32.20 4.46
852 869 5.784578 TCTTTCTTTAGCAAAAAGGACCC 57.215 39.130 10.58 0.00 32.20 4.46
865 882 4.393239 AAAGGACCCATATGGATGATGG 57.607 45.455 24.00 7.59 43.12 3.51
888 905 1.153756 CCCAACAGGCCCAAGAAGT 59.846 57.895 0.00 0.00 0.00 3.01
960 983 0.739813 CGTTTCGTCATCTCCCCACC 60.740 60.000 0.00 0.00 0.00 4.61
961 984 0.613777 GTTTCGTCATCTCCCCACCT 59.386 55.000 0.00 0.00 0.00 4.00
962 985 0.902531 TTTCGTCATCTCCCCACCTC 59.097 55.000 0.00 0.00 0.00 3.85
963 986 0.976073 TTCGTCATCTCCCCACCTCC 60.976 60.000 0.00 0.00 0.00 4.30
964 987 2.435693 CGTCATCTCCCCACCTCCC 61.436 68.421 0.00 0.00 0.00 4.30
965 988 1.003573 GTCATCTCCCCACCTCCCT 59.996 63.158 0.00 0.00 0.00 4.20
966 989 1.051556 GTCATCTCCCCACCTCCCTC 61.052 65.000 0.00 0.00 0.00 4.30
972 995 2.689034 CCCACCTCCCTCACTCCC 60.689 72.222 0.00 0.00 0.00 4.30
985 1008 1.925972 ACTCCCTCCCCAAAGCTCC 60.926 63.158 0.00 0.00 0.00 4.70
990 1013 4.082523 TCCCCAAAGCTCCGCTCG 62.083 66.667 0.00 0.00 38.25 5.03
995 1018 4.083862 AAAGCTCCGCTCGTCCCC 62.084 66.667 0.00 0.00 38.25 4.81
1107 1130 1.028905 GTATCAGCAGCGTCTCCTCT 58.971 55.000 0.00 0.00 0.00 3.69
1443 1466 2.203549 GAGAGGGCAAGGACAAGGGG 62.204 65.000 0.00 0.00 0.00 4.79
1765 1788 4.845580 AGGATTCTGCTGCGCCGG 62.846 66.667 4.18 0.00 0.00 6.13
1842 1865 2.381911 GGTGGGTTCGACAGGAGTATA 58.618 52.381 0.00 0.00 0.00 1.47
2165 2194 2.041081 TCCACAGTAAATGGAAGGTGGG 59.959 50.000 8.58 0.00 43.43 4.61
2314 2343 4.300803 TGATTGAGCAAAAGCATGTGTTC 58.699 39.130 0.00 0.00 0.00 3.18
2395 2425 2.182827 CAATCAGGACAGGACTGGAGA 58.817 52.381 4.14 0.00 36.62 3.71
2436 2466 5.839063 TCAGGGAGGTCGATTGTCTTATATT 59.161 40.000 0.00 0.00 0.00 1.28
2463 2493 3.394674 TGAACTACAACCTTCGATGCA 57.605 42.857 0.00 0.00 0.00 3.96
2533 2563 1.202020 CGATGCCATTGGTGTTGTACG 60.202 52.381 4.26 0.00 0.00 3.67
2582 2612 3.322828 AGCCAACTGTTGAGCATGATTTT 59.677 39.130 25.21 9.06 31.84 1.82
2595 2625 7.160049 TGAGCATGATTTTCAAAAGCCAATTA 58.840 30.769 0.00 0.00 0.00 1.40
2608 2638 4.127566 AGCCAATTATTGAGCGCAATTT 57.872 36.364 20.95 7.59 41.87 1.82
2766 2796 4.567195 TCCCTGTGGATGCTGACT 57.433 55.556 0.00 0.00 35.03 3.41
2767 2797 2.777536 TCCCTGTGGATGCTGACTT 58.222 52.632 0.00 0.00 35.03 3.01
2768 2798 0.325933 TCCCTGTGGATGCTGACTTG 59.674 55.000 0.00 0.00 35.03 3.16
2769 2799 1.310933 CCCTGTGGATGCTGACTTGC 61.311 60.000 0.00 0.00 0.00 4.01
2770 2800 0.322277 CCTGTGGATGCTGACTTGCT 60.322 55.000 0.00 0.00 0.00 3.91
2771 2801 1.531423 CTGTGGATGCTGACTTGCTT 58.469 50.000 0.00 0.00 0.00 3.91
2772 2802 1.467734 CTGTGGATGCTGACTTGCTTC 59.532 52.381 0.00 0.00 36.69 3.86
2774 2804 2.486796 GGATGCTGACTTGCTTCCC 58.513 57.895 9.40 0.00 45.76 3.97
2775 2805 0.034670 GGATGCTGACTTGCTTCCCT 60.035 55.000 9.40 0.00 45.76 4.20
2776 2806 1.093159 GATGCTGACTTGCTTCCCTG 58.907 55.000 0.00 0.00 32.94 4.45
2777 2807 0.403271 ATGCTGACTTGCTTCCCTGT 59.597 50.000 0.00 0.00 0.00 4.00
2778 2808 0.535780 TGCTGACTTGCTTCCCTGTG 60.536 55.000 0.00 0.00 0.00 3.66
2779 2809 1.239968 GCTGACTTGCTTCCCTGTGG 61.240 60.000 0.00 0.00 0.00 4.17
2780 2810 0.397941 CTGACTTGCTTCCCTGTGGA 59.602 55.000 0.00 0.00 39.54 4.02
2781 2811 1.004044 CTGACTTGCTTCCCTGTGGAT 59.996 52.381 0.00 0.00 41.40 3.41
2782 2812 1.271543 TGACTTGCTTCCCTGTGGATG 60.272 52.381 0.00 0.00 41.40 3.51
2787 2817 3.165606 CTTCCCTGTGGATGCTGAC 57.834 57.895 0.00 0.00 41.40 3.51
3142 3173 3.306364 CGATAGAATGGCGGAGGAAATCT 60.306 47.826 0.00 0.00 39.76 2.40
3402 3436 6.806751 TGTATCTCCTTTGTACTGTGCTATC 58.193 40.000 0.00 0.00 0.00 2.08
3469 3503 6.528321 TCTGAATATGATCATTGTGTCCCTC 58.472 40.000 14.65 0.00 0.00 4.30
3613 3650 1.697432 AGGGGAAATGACTTCGTGACA 59.303 47.619 0.00 0.00 34.56 3.58
3702 3739 0.679002 GCCAGGCTCAAAGCATCAGA 60.679 55.000 3.29 0.00 44.75 3.27
3830 3867 6.317391 CGAGCTGAGGAAAAAGGAGAATAATT 59.683 38.462 0.00 0.00 0.00 1.40
3966 4003 2.743664 TGTTCATTTCCGAGACAGCATG 59.256 45.455 0.00 0.00 46.00 4.06
3967 4004 2.028420 TCATTTCCGAGACAGCATGG 57.972 50.000 0.00 0.00 43.62 3.66
4244 4283 7.977789 TTTCACATAGAAGTTGCAATGTAGA 57.022 32.000 0.59 0.15 37.57 2.59
4429 4469 6.975196 ATTGCTATCTCTCTAGAAGCTGAA 57.025 37.500 13.17 2.75 37.07 3.02
4687 4727 8.483307 AACATTTTCAGGCATTAAATCATCAC 57.517 30.769 0.00 0.00 0.00 3.06
4837 4877 1.043816 ATCAGGTACAGATGAGGGCG 58.956 55.000 0.00 0.00 31.88 6.13
4957 5063 7.333528 CTGGCTTAGCAAAATACTCCATTAA 57.666 36.000 6.53 0.00 0.00 1.40
5144 5370 4.142381 GCGATTGCCTCTAAAAACCAAGAT 60.142 41.667 0.00 0.00 33.98 2.40
5295 5521 0.108585 TGAAACTCCAGGCCAGTGTC 59.891 55.000 5.01 5.10 0.00 3.67
5296 5522 0.951040 GAAACTCCAGGCCAGTGTCG 60.951 60.000 5.01 0.00 0.00 4.35
5370 5597 2.049248 GCATGCCCGTGTGGTTTG 60.049 61.111 6.36 0.00 36.04 2.93
5474 5701 3.199946 TCCTTACCACCAATGAGGATGTC 59.800 47.826 0.00 0.00 41.22 3.06
5556 5787 5.117406 AGACTCAAACAAGGTTTCCTCTT 57.883 39.130 0.00 0.00 30.89 2.85
5558 5789 6.659824 AGACTCAAACAAGGTTTCCTCTTAA 58.340 36.000 0.00 0.00 30.89 1.85
5559 5790 6.542735 AGACTCAAACAAGGTTTCCTCTTAAC 59.457 38.462 0.00 0.00 30.89 2.01
5560 5791 6.184789 ACTCAAACAAGGTTTCCTCTTAACA 58.815 36.000 0.00 0.00 30.89 2.41
5561 5792 6.095021 ACTCAAACAAGGTTTCCTCTTAACAC 59.905 38.462 0.00 0.00 30.89 3.32
5562 5793 5.946972 TCAAACAAGGTTTCCTCTTAACACA 59.053 36.000 0.00 0.00 30.89 3.72
5563 5794 6.605594 TCAAACAAGGTTTCCTCTTAACACAT 59.394 34.615 0.00 0.00 30.89 3.21
5596 5831 0.321671 TCGGAAGAGGAGGTTTGCAG 59.678 55.000 0.00 0.00 34.84 4.41
5693 5928 4.730966 TCTATCTATTCTCCTGAGCCGTT 58.269 43.478 0.00 0.00 0.00 4.44
5710 5945 3.362888 GCCGTTGCAAAATTCATGTGTTC 60.363 43.478 0.00 0.00 37.47 3.18
5729 5964 1.336440 TCGTTTGTGCCTGTTTGGATG 59.664 47.619 0.00 0.00 38.35 3.51
5731 5966 1.047002 TTTGTGCCTGTTTGGATGGG 58.953 50.000 0.00 0.00 38.35 4.00
5733 5968 0.409092 TGTGCCTGTTTGGATGGGAT 59.591 50.000 0.00 0.00 38.35 3.85
5734 5969 0.819582 GTGCCTGTTTGGATGGGATG 59.180 55.000 0.00 0.00 38.35 3.51
5738 5974 2.624838 GCCTGTTTGGATGGGATGTATG 59.375 50.000 0.00 0.00 38.35 2.39
5771 6007 8.646004 TGTGGAAAATGAGGAATTGTATTTTGA 58.354 29.630 0.00 0.00 34.07 2.69
5787 6023 9.771534 TTGTATTTTGAAAAAGTAATTCCTGGG 57.228 29.630 0.00 0.00 0.00 4.45
5788 6024 8.371699 TGTATTTTGAAAAAGTAATTCCTGGGG 58.628 33.333 0.00 0.00 0.00 4.96
5789 6025 6.816616 TTTTGAAAAAGTAATTCCTGGGGT 57.183 33.333 0.00 0.00 0.00 4.95
5790 6026 5.799827 TTGAAAAAGTAATTCCTGGGGTG 57.200 39.130 0.00 0.00 0.00 4.61
5791 6027 4.810345 TGAAAAAGTAATTCCTGGGGTGT 58.190 39.130 0.00 0.00 0.00 4.16
5792 6028 5.212745 TGAAAAAGTAATTCCTGGGGTGTT 58.787 37.500 0.00 0.00 0.00 3.32
5793 6029 5.303333 TGAAAAAGTAATTCCTGGGGTGTTC 59.697 40.000 0.00 0.00 0.00 3.18
5794 6030 4.741928 AAAGTAATTCCTGGGGTGTTCT 57.258 40.909 0.00 0.00 0.00 3.01
5795 6031 4.741928 AAGTAATTCCTGGGGTGTTCTT 57.258 40.909 0.00 0.00 0.00 2.52
5796 6032 4.741928 AGTAATTCCTGGGGTGTTCTTT 57.258 40.909 0.00 0.00 0.00 2.52
5797 6033 4.407365 AGTAATTCCTGGGGTGTTCTTTG 58.593 43.478 0.00 0.00 0.00 2.77
5798 6034 3.328535 AATTCCTGGGGTGTTCTTTGT 57.671 42.857 0.00 0.00 0.00 2.83
5799 6035 2.838637 TTCCTGGGGTGTTCTTTGTT 57.161 45.000 0.00 0.00 0.00 2.83
5800 6036 2.838637 TCCTGGGGTGTTCTTTGTTT 57.161 45.000 0.00 0.00 0.00 2.83
5801 6037 2.383855 TCCTGGGGTGTTCTTTGTTTG 58.616 47.619 0.00 0.00 0.00 2.93
5802 6038 2.107366 CCTGGGGTGTTCTTTGTTTGT 58.893 47.619 0.00 0.00 0.00 2.83
5803 6039 3.053544 TCCTGGGGTGTTCTTTGTTTGTA 60.054 43.478 0.00 0.00 0.00 2.41
5804 6040 3.317993 CCTGGGGTGTTCTTTGTTTGTAG 59.682 47.826 0.00 0.00 0.00 2.74
5805 6041 3.292460 TGGGGTGTTCTTTGTTTGTAGG 58.708 45.455 0.00 0.00 0.00 3.18
5806 6042 3.053544 TGGGGTGTTCTTTGTTTGTAGGA 60.054 43.478 0.00 0.00 0.00 2.94
5807 6043 4.149598 GGGGTGTTCTTTGTTTGTAGGAT 58.850 43.478 0.00 0.00 0.00 3.24
5808 6044 4.587262 GGGGTGTTCTTTGTTTGTAGGATT 59.413 41.667 0.00 0.00 0.00 3.01
5809 6045 5.508994 GGGGTGTTCTTTGTTTGTAGGATTG 60.509 44.000 0.00 0.00 0.00 2.67
5810 6046 5.508994 GGGTGTTCTTTGTTTGTAGGATTGG 60.509 44.000 0.00 0.00 0.00 3.16
5811 6047 5.300792 GGTGTTCTTTGTTTGTAGGATTGGA 59.699 40.000 0.00 0.00 0.00 3.53
5812 6048 6.206498 GTGTTCTTTGTTTGTAGGATTGGAC 58.794 40.000 0.00 0.00 0.00 4.02
5813 6049 5.300792 TGTTCTTTGTTTGTAGGATTGGACC 59.699 40.000 0.00 0.00 0.00 4.46
5814 6050 5.055265 TCTTTGTTTGTAGGATTGGACCA 57.945 39.130 0.00 0.00 0.00 4.02
5815 6051 4.825085 TCTTTGTTTGTAGGATTGGACCAC 59.175 41.667 0.00 0.00 0.00 4.16
5816 6052 3.866703 TGTTTGTAGGATTGGACCACA 57.133 42.857 0.00 0.00 0.00 4.17
5817 6053 4.171878 TGTTTGTAGGATTGGACCACAA 57.828 40.909 0.00 0.00 44.54 3.33
5818 6054 4.537751 TGTTTGTAGGATTGGACCACAAA 58.462 39.130 0.00 0.00 43.46 2.83
5819 6055 4.956700 TGTTTGTAGGATTGGACCACAAAA 59.043 37.500 7.13 0.00 43.46 2.44
5820 6056 5.422331 TGTTTGTAGGATTGGACCACAAAAA 59.578 36.000 7.13 0.72 43.46 1.94
5821 6057 6.098982 TGTTTGTAGGATTGGACCACAAAAAT 59.901 34.615 7.13 0.00 43.46 1.82
5822 6058 7.287927 TGTTTGTAGGATTGGACCACAAAAATA 59.712 33.333 7.13 0.00 43.46 1.40
5823 6059 8.311109 GTTTGTAGGATTGGACCACAAAAATAT 58.689 33.333 7.13 0.00 43.46 1.28
5824 6060 7.639113 TGTAGGATTGGACCACAAAAATATC 57.361 36.000 0.00 0.00 43.46 1.63
5825 6061 7.410174 TGTAGGATTGGACCACAAAAATATCT 58.590 34.615 0.00 0.00 43.46 1.98
5826 6062 7.893302 TGTAGGATTGGACCACAAAAATATCTT 59.107 33.333 0.00 0.00 43.46 2.40
5827 6063 9.403583 GTAGGATTGGACCACAAAAATATCTTA 57.596 33.333 0.00 0.00 43.46 2.10
5828 6064 8.525290 AGGATTGGACCACAAAAATATCTTAG 57.475 34.615 0.00 0.00 43.46 2.18
5829 6065 8.336235 AGGATTGGACCACAAAAATATCTTAGA 58.664 33.333 0.00 0.00 43.46 2.10
5830 6066 8.966868 GGATTGGACCACAAAAATATCTTAGAA 58.033 33.333 0.00 0.00 43.46 2.10
5833 6069 9.753674 TTGGACCACAAAAATATCTTAGAATCT 57.246 29.630 0.00 0.00 35.79 2.40
5834 6070 9.753674 TGGACCACAAAAATATCTTAGAATCTT 57.246 29.630 0.00 0.00 0.00 2.40
5858 6094 7.739498 TTTTTATTGTACTCCCTCTGTTCAC 57.261 36.000 0.00 0.00 0.00 3.18
5859 6095 6.428083 TTTATTGTACTCCCTCTGTTCACA 57.572 37.500 0.00 0.00 0.00 3.58
5860 6096 4.974645 ATTGTACTCCCTCTGTTCACAA 57.025 40.909 0.00 0.00 0.00 3.33
5861 6097 4.764050 TTGTACTCCCTCTGTTCACAAA 57.236 40.909 0.00 0.00 0.00 2.83
5862 6098 4.974645 TGTACTCCCTCTGTTCACAAAT 57.025 40.909 0.00 0.00 0.00 2.32
5863 6099 6.428083 TTGTACTCCCTCTGTTCACAAATA 57.572 37.500 0.00 0.00 0.00 1.40
5864 6100 6.620877 TGTACTCCCTCTGTTCACAAATAT 57.379 37.500 0.00 0.00 0.00 1.28
5865 6101 7.727578 TGTACTCCCTCTGTTCACAAATATA 57.272 36.000 0.00 0.00 0.00 0.86
5866 6102 8.141298 TGTACTCCCTCTGTTCACAAATATAA 57.859 34.615 0.00 0.00 0.00 0.98
5867 6103 8.258007 TGTACTCCCTCTGTTCACAAATATAAG 58.742 37.037 0.00 0.00 0.00 1.73
5868 6104 7.496346 ACTCCCTCTGTTCACAAATATAAGA 57.504 36.000 0.00 0.00 0.00 2.10
5869 6105 8.095452 ACTCCCTCTGTTCACAAATATAAGAT 57.905 34.615 0.00 0.00 0.00 2.40
5870 6106 7.989741 ACTCCCTCTGTTCACAAATATAAGATG 59.010 37.037 0.00 0.00 0.00 2.90
5871 6107 7.861629 TCCCTCTGTTCACAAATATAAGATGT 58.138 34.615 0.00 0.00 0.00 3.06
5872 6108 8.328758 TCCCTCTGTTCACAAATATAAGATGTT 58.671 33.333 0.00 0.00 0.00 2.71
5873 6109 8.960591 CCCTCTGTTCACAAATATAAGATGTTT 58.039 33.333 0.00 0.00 0.00 2.83
5912 6148 9.988350 ATTACATACGAATTGAAATGAGTGAAC 57.012 29.630 0.00 0.00 0.00 3.18
5913 6149 7.433708 ACATACGAATTGAAATGAGTGAACA 57.566 32.000 0.00 0.00 0.00 3.18
5914 6150 7.870826 ACATACGAATTGAAATGAGTGAACAA 58.129 30.769 0.00 0.00 0.00 2.83
5915 6151 8.349245 ACATACGAATTGAAATGAGTGAACAAA 58.651 29.630 0.00 0.00 0.00 2.83
5916 6152 8.629986 CATACGAATTGAAATGAGTGAACAAAC 58.370 33.333 0.00 0.00 0.00 2.93
5917 6153 6.559810 ACGAATTGAAATGAGTGAACAAACA 58.440 32.000 0.00 0.00 0.00 2.83
5918 6154 7.202526 ACGAATTGAAATGAGTGAACAAACAT 58.797 30.769 0.00 0.00 0.00 2.71
5919 6155 8.349245 ACGAATTGAAATGAGTGAACAAACATA 58.651 29.630 0.00 0.00 0.00 2.29
5920 6156 8.629986 CGAATTGAAATGAGTGAACAAACATAC 58.370 33.333 0.00 0.00 0.00 2.39
5921 6157 9.683069 GAATTGAAATGAGTGAACAAACATACT 57.317 29.630 0.00 0.00 0.00 2.12
5929 6165 9.897744 ATGAGTGAACAAACATACTAAAACATG 57.102 29.630 0.00 0.00 0.00 3.21
5930 6166 8.898761 TGAGTGAACAAACATACTAAAACATGT 58.101 29.630 0.00 0.00 36.96 3.21
5931 6167 9.730420 GAGTGAACAAACATACTAAAACATGTT 57.270 29.630 4.92 4.92 45.03 2.71
5945 6181 9.841295 ACTAAAACATGTTTATATACACCCGAT 57.159 29.630 23.53 6.42 31.63 4.18
5948 6184 8.740123 AAACATGTTTATATACACCCGATTCA 57.260 30.769 22.10 0.00 0.00 2.57
5949 6185 7.724305 ACATGTTTATATACACCCGATTCAC 57.276 36.000 0.00 0.00 0.00 3.18
5950 6186 7.276658 ACATGTTTATATACACCCGATTCACA 58.723 34.615 0.00 0.00 0.00 3.58
5951 6187 7.771361 ACATGTTTATATACACCCGATTCACAA 59.229 33.333 0.00 0.00 0.00 3.33
5952 6188 8.616942 CATGTTTATATACACCCGATTCACAAA 58.383 33.333 0.00 0.00 0.00 2.83
5953 6189 8.563123 TGTTTATATACACCCGATTCACAAAA 57.437 30.769 0.00 0.00 0.00 2.44
5954 6190 8.670135 TGTTTATATACACCCGATTCACAAAAG 58.330 33.333 0.00 0.00 0.00 2.27
5955 6191 8.885722 GTTTATATACACCCGATTCACAAAAGA 58.114 33.333 0.00 0.00 0.00 2.52
5956 6192 9.451002 TTTATATACACCCGATTCACAAAAGAA 57.549 29.630 0.00 0.00 0.00 2.52
5957 6193 9.621629 TTATATACACCCGATTCACAAAAGAAT 57.378 29.630 0.00 0.00 40.75 2.40
5959 6195 7.931578 ATACACCCGATTCACAAAAGAATAA 57.068 32.000 0.00 0.00 38.30 1.40
5960 6196 6.254281 ACACCCGATTCACAAAAGAATAAG 57.746 37.500 0.00 0.00 38.30 1.73
5961 6197 6.001460 ACACCCGATTCACAAAAGAATAAGA 58.999 36.000 0.00 0.00 38.30 2.10
5962 6198 6.488683 ACACCCGATTCACAAAAGAATAAGAA 59.511 34.615 0.00 0.00 38.30 2.52
5963 6199 6.801862 CACCCGATTCACAAAAGAATAAGAAC 59.198 38.462 0.00 0.00 38.30 3.01
5964 6200 6.488683 ACCCGATTCACAAAAGAATAAGAACA 59.511 34.615 0.00 0.00 38.30 3.18
5965 6201 7.176690 ACCCGATTCACAAAAGAATAAGAACAT 59.823 33.333 0.00 0.00 38.30 2.71
5966 6202 8.028938 CCCGATTCACAAAAGAATAAGAACATT 58.971 33.333 0.00 0.00 38.30 2.71
5967 6203 9.410556 CCGATTCACAAAAGAATAAGAACATTT 57.589 29.630 0.00 0.00 38.30 2.32
5984 6220 8.955061 AGAACATTTTGTATTCGTGAATGAAG 57.045 30.769 5.37 0.00 33.24 3.02
5985 6221 8.023128 AGAACATTTTGTATTCGTGAATGAAGG 58.977 33.333 5.37 0.82 33.24 3.46
5986 6222 6.620678 ACATTTTGTATTCGTGAATGAAGGG 58.379 36.000 5.37 0.00 33.24 3.95
5987 6223 6.432783 ACATTTTGTATTCGTGAATGAAGGGA 59.567 34.615 5.37 0.00 33.24 4.20
5988 6224 6.494893 TTTTGTATTCGTGAATGAAGGGAG 57.505 37.500 5.37 0.00 32.50 4.30
5989 6225 4.819105 TGTATTCGTGAATGAAGGGAGT 57.181 40.909 5.37 0.00 32.50 3.85
5990 6226 5.925506 TGTATTCGTGAATGAAGGGAGTA 57.074 39.130 5.37 0.00 32.50 2.59
5991 6227 5.902681 TGTATTCGTGAATGAAGGGAGTAG 58.097 41.667 5.37 0.00 32.50 2.57
5992 6228 5.421056 TGTATTCGTGAATGAAGGGAGTAGT 59.579 40.000 5.37 0.00 32.50 2.73
5993 6229 3.868757 TCGTGAATGAAGGGAGTAGTG 57.131 47.619 0.00 0.00 0.00 2.74
5994 6230 2.496070 TCGTGAATGAAGGGAGTAGTGG 59.504 50.000 0.00 0.00 0.00 4.00
5995 6231 2.633488 GTGAATGAAGGGAGTAGTGGC 58.367 52.381 0.00 0.00 0.00 5.01
5996 6232 2.027192 GTGAATGAAGGGAGTAGTGGCA 60.027 50.000 0.00 0.00 0.00 4.92
5997 6233 2.642311 TGAATGAAGGGAGTAGTGGCAA 59.358 45.455 0.00 0.00 0.00 4.52
5998 6234 3.073798 TGAATGAAGGGAGTAGTGGCAAA 59.926 43.478 0.00 0.00 0.00 3.68
5999 6235 3.806949 ATGAAGGGAGTAGTGGCAAAA 57.193 42.857 0.00 0.00 0.00 2.44
6000 6236 3.806949 TGAAGGGAGTAGTGGCAAAAT 57.193 42.857 0.00 0.00 0.00 1.82
6001 6237 3.420893 TGAAGGGAGTAGTGGCAAAATG 58.579 45.455 0.00 0.00 0.00 2.32
6002 6238 3.181434 TGAAGGGAGTAGTGGCAAAATGT 60.181 43.478 0.00 0.00 0.00 2.71
6003 6239 2.795329 AGGGAGTAGTGGCAAAATGTG 58.205 47.619 0.00 0.00 0.00 3.21
6004 6240 2.108250 AGGGAGTAGTGGCAAAATGTGT 59.892 45.455 0.00 0.00 0.00 3.72
6005 6241 2.228822 GGGAGTAGTGGCAAAATGTGTG 59.771 50.000 0.00 0.00 0.00 3.82
6006 6242 2.351738 GGAGTAGTGGCAAAATGTGTGC 60.352 50.000 0.00 0.00 41.45 4.57
6007 6243 2.293122 GAGTAGTGGCAAAATGTGTGCA 59.707 45.455 0.00 0.00 44.07 4.57
6008 6244 2.692557 AGTAGTGGCAAAATGTGTGCAA 59.307 40.909 0.00 0.00 44.07 4.08
6009 6245 2.228138 AGTGGCAAAATGTGTGCAAG 57.772 45.000 0.00 0.00 44.07 4.01
6010 6246 1.755959 AGTGGCAAAATGTGTGCAAGA 59.244 42.857 0.00 0.00 44.07 3.02
6011 6247 2.168106 AGTGGCAAAATGTGTGCAAGAA 59.832 40.909 0.00 0.00 44.07 2.52
6012 6248 2.935201 GTGGCAAAATGTGTGCAAGAAA 59.065 40.909 0.00 0.00 44.07 2.52
6013 6249 3.373439 GTGGCAAAATGTGTGCAAGAAAA 59.627 39.130 0.00 0.00 44.07 2.29
6014 6250 4.005650 TGGCAAAATGTGTGCAAGAAAAA 58.994 34.783 0.00 0.00 44.07 1.94
6033 6269 5.722021 AAAAACGCCAAGGAAATGTATCT 57.278 34.783 0.00 0.00 0.00 1.98
6034 6270 6.827586 AAAAACGCCAAGGAAATGTATCTA 57.172 33.333 0.00 0.00 0.00 1.98
6035 6271 5.813080 AAACGCCAAGGAAATGTATCTAC 57.187 39.130 0.00 0.00 0.00 2.59
6036 6272 3.454375 ACGCCAAGGAAATGTATCTACG 58.546 45.455 0.00 0.00 0.00 3.51
6037 6273 2.800544 CGCCAAGGAAATGTATCTACGG 59.199 50.000 0.00 0.00 0.00 4.02
6038 6274 3.491964 CGCCAAGGAAATGTATCTACGGA 60.492 47.826 0.00 0.00 0.00 4.69
6039 6275 4.642429 GCCAAGGAAATGTATCTACGGAT 58.358 43.478 0.00 0.00 36.07 4.18
6040 6276 5.063880 GCCAAGGAAATGTATCTACGGATT 58.936 41.667 0.00 0.00 33.71 3.01
6041 6277 5.049405 GCCAAGGAAATGTATCTACGGATTG 60.049 44.000 0.00 0.00 33.71 2.67
6042 6278 5.049405 CCAAGGAAATGTATCTACGGATTGC 60.049 44.000 0.00 0.00 33.71 3.56
6043 6279 5.290493 AGGAAATGTATCTACGGATTGCA 57.710 39.130 0.00 0.00 33.71 4.08
6044 6280 5.680619 AGGAAATGTATCTACGGATTGCAA 58.319 37.500 0.00 0.00 33.71 4.08
6045 6281 5.527582 AGGAAATGTATCTACGGATTGCAAC 59.472 40.000 0.00 0.00 33.71 4.17
6046 6282 5.403897 AAATGTATCTACGGATTGCAACG 57.596 39.130 0.00 4.29 33.71 4.10
6047 6283 3.786516 TGTATCTACGGATTGCAACGA 57.213 42.857 15.44 0.52 33.71 3.85
6048 6284 4.112716 TGTATCTACGGATTGCAACGAA 57.887 40.909 15.44 2.35 33.71 3.85
6049 6285 3.861113 TGTATCTACGGATTGCAACGAAC 59.139 43.478 15.44 1.91 33.71 3.95
6050 6286 2.442212 TCTACGGATTGCAACGAACA 57.558 45.000 15.44 1.03 0.00 3.18
6051 6287 2.756829 TCTACGGATTGCAACGAACAA 58.243 42.857 15.44 0.00 0.00 2.83
6052 6288 3.132160 TCTACGGATTGCAACGAACAAA 58.868 40.909 15.44 0.00 0.00 2.83
6053 6289 2.853731 ACGGATTGCAACGAACAAAA 57.146 40.000 15.44 0.00 0.00 2.44
6054 6290 3.363341 ACGGATTGCAACGAACAAAAT 57.637 38.095 15.44 0.00 0.00 1.82
6055 6291 3.049206 ACGGATTGCAACGAACAAAATG 58.951 40.909 15.44 0.00 0.00 2.32
6056 6292 3.243234 ACGGATTGCAACGAACAAAATGA 60.243 39.130 15.44 0.00 0.00 2.57
6057 6293 3.119463 CGGATTGCAACGAACAAAATGAC 59.881 43.478 0.00 0.00 0.00 3.06
6058 6294 4.047822 GGATTGCAACGAACAAAATGACA 58.952 39.130 0.00 0.00 0.00 3.58
6059 6295 4.505922 GGATTGCAACGAACAAAATGACAA 59.494 37.500 0.00 0.00 0.00 3.18
6060 6296 5.006165 GGATTGCAACGAACAAAATGACAAA 59.994 36.000 0.00 0.00 0.00 2.83
6061 6297 6.292811 GGATTGCAACGAACAAAATGACAAAT 60.293 34.615 0.00 0.00 0.00 2.32
6062 6298 7.095857 GGATTGCAACGAACAAAATGACAAATA 60.096 33.333 0.00 0.00 0.00 1.40
6063 6299 7.525688 TTGCAACGAACAAAATGACAAATAA 57.474 28.000 0.00 0.00 0.00 1.40
6064 6300 7.525688 TGCAACGAACAAAATGACAAATAAA 57.474 28.000 0.00 0.00 0.00 1.40
6065 6301 7.963981 TGCAACGAACAAAATGACAAATAAAA 58.036 26.923 0.00 0.00 0.00 1.52
6066 6302 8.443160 TGCAACGAACAAAATGACAAATAAAAA 58.557 25.926 0.00 0.00 0.00 1.94
6087 6323 7.920160 AAAAATTCACATGCGGGAATAAAAT 57.080 28.000 7.91 0.00 33.57 1.82
6088 6324 7.538303 AAAATTCACATGCGGGAATAAAATC 57.462 32.000 7.91 0.00 33.57 2.17
6089 6325 4.647424 TTCACATGCGGGAATAAAATCC 57.353 40.909 0.00 0.00 38.86 3.01
6090 6326 3.897239 TCACATGCGGGAATAAAATCCT 58.103 40.909 0.00 0.00 39.57 3.24
6091 6327 3.882888 TCACATGCGGGAATAAAATCCTC 59.117 43.478 0.00 0.00 39.57 3.71
6092 6328 3.004734 CACATGCGGGAATAAAATCCTCC 59.995 47.826 0.00 0.00 39.57 4.30
6093 6329 3.221771 CATGCGGGAATAAAATCCTCCA 58.778 45.455 0.00 0.00 39.57 3.86
6094 6330 2.930950 TGCGGGAATAAAATCCTCCAG 58.069 47.619 0.00 0.00 39.57 3.86
6095 6331 2.507886 TGCGGGAATAAAATCCTCCAGA 59.492 45.455 0.00 0.00 39.57 3.86
6096 6332 3.053991 TGCGGGAATAAAATCCTCCAGAA 60.054 43.478 0.00 0.00 39.57 3.02
6097 6333 3.951680 GCGGGAATAAAATCCTCCAGAAA 59.048 43.478 0.00 0.00 39.57 2.52
6098 6334 4.401202 GCGGGAATAAAATCCTCCAGAAAA 59.599 41.667 0.00 0.00 39.57 2.29
6099 6335 5.069119 GCGGGAATAAAATCCTCCAGAAAAT 59.931 40.000 0.00 0.00 39.57 1.82
6100 6336 6.264518 GCGGGAATAAAATCCTCCAGAAAATA 59.735 38.462 0.00 0.00 39.57 1.40
6101 6337 7.039714 GCGGGAATAAAATCCTCCAGAAAATAT 60.040 37.037 0.00 0.00 39.57 1.28
6102 6338 8.299570 CGGGAATAAAATCCTCCAGAAAATATG 58.700 37.037 0.00 0.00 39.57 1.78
6103 6339 9.367160 GGGAATAAAATCCTCCAGAAAATATGA 57.633 33.333 0.00 0.00 39.57 2.15
6108 6344 7.651027 AAATCCTCCAGAAAATATGACTTGG 57.349 36.000 0.00 0.00 0.00 3.61
6109 6345 6.581388 ATCCTCCAGAAAATATGACTTGGA 57.419 37.500 0.00 0.00 0.00 3.53
6110 6346 5.745227 TCCTCCAGAAAATATGACTTGGAC 58.255 41.667 0.00 0.00 0.00 4.02
6111 6347 5.250543 TCCTCCAGAAAATATGACTTGGACA 59.749 40.000 0.00 0.00 0.00 4.02
6112 6348 6.069440 TCCTCCAGAAAATATGACTTGGACAT 60.069 38.462 0.00 0.00 0.00 3.06
6113 6349 6.261826 CCTCCAGAAAATATGACTTGGACATC 59.738 42.308 0.00 0.00 0.00 3.06
6114 6350 6.720309 TCCAGAAAATATGACTTGGACATCA 58.280 36.000 0.00 0.00 0.00 3.07
6115 6351 7.174413 TCCAGAAAATATGACTTGGACATCAA 58.826 34.615 0.00 0.00 0.00 2.57
6116 6352 7.835682 TCCAGAAAATATGACTTGGACATCAAT 59.164 33.333 0.00 0.00 34.45 2.57
6117 6353 8.472413 CCAGAAAATATGACTTGGACATCAATT 58.528 33.333 0.00 0.00 34.45 2.32
6118 6354 9.512435 CAGAAAATATGACTTGGACATCAATTC 57.488 33.333 0.00 0.00 36.11 2.17
6119 6355 9.246670 AGAAAATATGACTTGGACATCAATTCA 57.753 29.630 0.00 0.00 45.06 2.57
6120 6356 9.859427 GAAAATATGACTTGGACATCAATTCAA 57.141 29.630 3.59 0.00 44.47 2.69
6122 6358 9.811995 AAATATGACTTGGACATCAATTCAATG 57.188 29.630 3.59 0.00 44.47 2.82
6123 6359 6.845758 ATGACTTGGACATCAATTCAATGT 57.154 33.333 3.23 3.23 44.47 2.71
6124 6360 7.943079 ATGACTTGGACATCAATTCAATGTA 57.057 32.000 3.54 0.00 44.47 2.29
6125 6361 7.144722 TGACTTGGACATCAATTCAATGTAC 57.855 36.000 5.95 5.95 40.53 2.90
6126 6362 6.942005 TGACTTGGACATCAATTCAATGTACT 59.058 34.615 11.99 0.00 40.53 2.73
6127 6363 8.100164 TGACTTGGACATCAATTCAATGTACTA 58.900 33.333 11.99 5.79 40.53 1.82
6128 6364 8.268850 ACTTGGACATCAATTCAATGTACTAC 57.731 34.615 11.99 2.64 38.54 2.73
6129 6365 6.902224 TGGACATCAATTCAATGTACTACG 57.098 37.500 11.99 0.00 38.54 3.51
6130 6366 6.635755 TGGACATCAATTCAATGTACTACGA 58.364 36.000 11.99 0.00 38.54 3.43
6131 6367 6.756542 TGGACATCAATTCAATGTACTACGAG 59.243 38.462 11.99 0.00 38.54 4.18
6132 6368 6.201044 GGACATCAATTCAATGTACTACGAGG 59.799 42.308 5.72 0.00 37.47 4.63
6133 6369 6.640518 ACATCAATTCAATGTACTACGAGGT 58.359 36.000 0.00 0.00 35.62 3.85
6134 6370 7.103641 ACATCAATTCAATGTACTACGAGGTT 58.896 34.615 0.00 0.00 35.62 3.50
6135 6371 7.606456 ACATCAATTCAATGTACTACGAGGTTT 59.394 33.333 0.00 0.00 35.62 3.27
6136 6372 7.972832 TCAATTCAATGTACTACGAGGTTTT 57.027 32.000 0.00 0.00 0.00 2.43
6137 6373 9.661563 ATCAATTCAATGTACTACGAGGTTTTA 57.338 29.630 0.00 0.00 0.00 1.52
6138 6374 8.928733 TCAATTCAATGTACTACGAGGTTTTAC 58.071 33.333 0.00 0.00 0.00 2.01
6139 6375 6.932901 TTCAATGTACTACGAGGTTTTACG 57.067 37.500 0.00 0.00 0.00 3.18
6140 6376 6.012658 TCAATGTACTACGAGGTTTTACGT 57.987 37.500 0.00 0.00 44.72 3.57
6141 6377 6.446318 TCAATGTACTACGAGGTTTTACGTT 58.554 36.000 0.00 0.00 42.61 3.99
6142 6378 6.922957 TCAATGTACTACGAGGTTTTACGTTT 59.077 34.615 0.00 0.00 42.61 3.60
6143 6379 6.934561 ATGTACTACGAGGTTTTACGTTTC 57.065 37.500 0.00 0.00 42.61 2.78
6144 6380 6.072112 TGTACTACGAGGTTTTACGTTTCT 57.928 37.500 0.00 0.00 42.61 2.52
6145 6381 6.142817 TGTACTACGAGGTTTTACGTTTCTC 58.857 40.000 0.00 0.00 42.61 2.87
6147 6383 2.482485 CGAGGTTTTACGTTTCTCGC 57.518 50.000 0.00 0.00 44.19 5.03
6148 6384 2.056577 CGAGGTTTTACGTTTCTCGCT 58.943 47.619 0.00 0.00 44.19 4.93
6149 6385 2.473984 CGAGGTTTTACGTTTCTCGCTT 59.526 45.455 0.00 0.00 44.19 4.68
6150 6386 3.060070 CGAGGTTTTACGTTTCTCGCTTT 60.060 43.478 0.00 0.00 44.19 3.51
6151 6387 4.551410 CGAGGTTTTACGTTTCTCGCTTTT 60.551 41.667 0.00 0.00 44.19 2.27
6152 6388 4.594136 AGGTTTTACGTTTCTCGCTTTTG 58.406 39.130 0.00 0.00 44.19 2.44
6153 6389 4.333372 AGGTTTTACGTTTCTCGCTTTTGA 59.667 37.500 0.00 0.00 44.19 2.69
6154 6390 5.029654 GGTTTTACGTTTCTCGCTTTTGAA 58.970 37.500 0.00 0.00 44.19 2.69
6155 6391 5.512434 GGTTTTACGTTTCTCGCTTTTGAAA 59.488 36.000 0.00 0.00 44.19 2.69
6156 6392 6.290904 GGTTTTACGTTTCTCGCTTTTGAAAG 60.291 38.462 0.00 0.00 44.19 2.62
6157 6393 3.334272 ACGTTTCTCGCTTTTGAAAGG 57.666 42.857 5.70 0.00 44.19 3.11
6158 6394 2.044135 CGTTTCTCGCTTTTGAAAGGC 58.956 47.619 1.53 1.53 36.53 4.35
6159 6395 2.044135 GTTTCTCGCTTTTGAAAGGCG 58.956 47.619 25.39 25.39 36.53 5.52
6160 6396 0.040425 TTCTCGCTTTTGAAAGGCGC 60.040 50.000 26.29 0.00 36.34 6.53
6161 6397 0.884704 TCTCGCTTTTGAAAGGCGCT 60.885 50.000 26.29 0.00 36.34 5.92
6162 6398 0.453449 CTCGCTTTTGAAAGGCGCTC 60.453 55.000 26.29 0.00 36.34 5.03
6163 6399 0.884704 TCGCTTTTGAAAGGCGCTCT 60.885 50.000 26.29 0.00 36.34 4.09
6164 6400 0.453449 CGCTTTTGAAAGGCGCTCTC 60.453 55.000 20.75 1.84 36.53 3.20
6165 6401 0.877743 GCTTTTGAAAGGCGCTCTCT 59.122 50.000 7.64 0.00 36.53 3.10
6166 6402 2.076863 GCTTTTGAAAGGCGCTCTCTA 58.923 47.619 7.64 0.00 36.53 2.43
6167 6403 2.680339 GCTTTTGAAAGGCGCTCTCTAT 59.320 45.455 7.64 0.00 36.53 1.98
6168 6404 3.127721 GCTTTTGAAAGGCGCTCTCTATT 59.872 43.478 7.64 0.00 36.53 1.73
6169 6405 4.656041 CTTTTGAAAGGCGCTCTCTATTG 58.344 43.478 7.64 0.00 32.40 1.90
6170 6406 3.610040 TTGAAAGGCGCTCTCTATTGA 57.390 42.857 7.64 0.00 0.00 2.57
6171 6407 3.610040 TGAAAGGCGCTCTCTATTGAA 57.390 42.857 7.64 0.00 0.00 2.69
6172 6408 3.937814 TGAAAGGCGCTCTCTATTGAAA 58.062 40.909 7.64 0.00 0.00 2.69
6173 6409 4.517285 TGAAAGGCGCTCTCTATTGAAAT 58.483 39.130 7.64 0.00 0.00 2.17
6174 6410 4.943705 TGAAAGGCGCTCTCTATTGAAATT 59.056 37.500 7.64 0.00 0.00 1.82
6175 6411 4.889832 AAGGCGCTCTCTATTGAAATTG 57.110 40.909 7.64 0.00 0.00 2.32
6176 6412 4.142609 AGGCGCTCTCTATTGAAATTGA 57.857 40.909 7.64 0.00 0.00 2.57
6177 6413 4.712476 AGGCGCTCTCTATTGAAATTGAT 58.288 39.130 7.64 0.00 0.00 2.57
6178 6414 5.858381 AGGCGCTCTCTATTGAAATTGATA 58.142 37.500 7.64 0.00 0.00 2.15
6179 6415 5.931146 AGGCGCTCTCTATTGAAATTGATAG 59.069 40.000 7.64 0.00 0.00 2.08
6180 6416 5.698545 GGCGCTCTCTATTGAAATTGATAGT 59.301 40.000 7.64 0.00 0.00 2.12
6181 6417 6.203723 GGCGCTCTCTATTGAAATTGATAGTT 59.796 38.462 7.64 0.00 0.00 2.24
6182 6418 7.254932 GGCGCTCTCTATTGAAATTGATAGTTT 60.255 37.037 7.64 0.00 0.00 2.66
6183 6419 7.585573 GCGCTCTCTATTGAAATTGATAGTTTG 59.414 37.037 0.00 0.00 0.00 2.93
6184 6420 8.066595 CGCTCTCTATTGAAATTGATAGTTTGG 58.933 37.037 4.58 0.00 0.00 3.28
6185 6421 9.113838 GCTCTCTATTGAAATTGATAGTTTGGA 57.886 33.333 4.58 0.00 0.00 3.53
6187 6423 9.618890 TCTCTATTGAAATTGATAGTTTGGAGG 57.381 33.333 0.00 0.00 0.00 4.30
6188 6424 8.225603 TCTATTGAAATTGATAGTTTGGAGGC 57.774 34.615 4.58 0.00 0.00 4.70
6189 6425 8.055181 TCTATTGAAATTGATAGTTTGGAGGCT 58.945 33.333 0.00 0.00 0.00 4.58
6190 6426 5.902613 TGAAATTGATAGTTTGGAGGCTG 57.097 39.130 0.00 0.00 0.00 4.85
6191 6427 5.324409 TGAAATTGATAGTTTGGAGGCTGT 58.676 37.500 0.00 0.00 0.00 4.40
6192 6428 5.415701 TGAAATTGATAGTTTGGAGGCTGTC 59.584 40.000 0.00 0.00 0.00 3.51
6193 6429 4.574674 ATTGATAGTTTGGAGGCTGTCA 57.425 40.909 0.00 0.00 32.40 3.58
6194 6430 4.365514 TTGATAGTTTGGAGGCTGTCAA 57.634 40.909 0.00 0.00 39.39 3.18
6195 6431 3.674997 TGATAGTTTGGAGGCTGTCAAC 58.325 45.455 0.00 0.00 31.55 3.18
6196 6432 3.072330 TGATAGTTTGGAGGCTGTCAACA 59.928 43.478 0.00 0.00 31.55 3.33
6197 6433 2.664402 AGTTTGGAGGCTGTCAACAT 57.336 45.000 0.00 0.00 0.00 2.71
6198 6434 2.233271 AGTTTGGAGGCTGTCAACATG 58.767 47.619 0.00 0.00 0.00 3.21
6199 6435 1.270550 GTTTGGAGGCTGTCAACATGG 59.729 52.381 0.00 0.00 0.00 3.66
6200 6436 0.478072 TTGGAGGCTGTCAACATGGT 59.522 50.000 0.00 0.00 0.00 3.55
6201 6437 0.250858 TGGAGGCTGTCAACATGGTG 60.251 55.000 3.69 3.69 0.00 4.17
6202 6438 0.036732 GGAGGCTGTCAACATGGTGA 59.963 55.000 10.05 10.05 0.00 4.02
6203 6439 1.446907 GAGGCTGTCAACATGGTGAG 58.553 55.000 15.31 4.46 0.00 3.51
6204 6440 1.002430 GAGGCTGTCAACATGGTGAGA 59.998 52.381 15.31 12.74 0.00 3.27
6205 6441 1.421268 AGGCTGTCAACATGGTGAGAA 59.579 47.619 15.31 4.68 0.00 2.87
6206 6442 2.158623 AGGCTGTCAACATGGTGAGAAA 60.159 45.455 15.31 1.90 0.00 2.52
6207 6443 2.821969 GGCTGTCAACATGGTGAGAAAT 59.178 45.455 15.31 0.00 0.00 2.17
6208 6444 3.366679 GGCTGTCAACATGGTGAGAAATG 60.367 47.826 15.31 2.20 0.00 2.32
6209 6445 3.366679 GCTGTCAACATGGTGAGAAATGG 60.367 47.826 15.31 1.80 0.00 3.16
6210 6446 4.074259 CTGTCAACATGGTGAGAAATGGA 58.926 43.478 15.31 0.00 0.00 3.41
6211 6447 4.468713 TGTCAACATGGTGAGAAATGGAA 58.531 39.130 15.31 0.00 0.00 3.53
6212 6448 4.520111 TGTCAACATGGTGAGAAATGGAAG 59.480 41.667 15.31 0.00 0.00 3.46
6213 6449 3.507233 TCAACATGGTGAGAAATGGAAGC 59.493 43.478 10.05 0.00 0.00 3.86
6214 6450 3.159213 ACATGGTGAGAAATGGAAGCA 57.841 42.857 0.00 0.00 0.00 3.91
6215 6451 2.821969 ACATGGTGAGAAATGGAAGCAC 59.178 45.455 0.00 0.00 0.00 4.40
6216 6452 2.655090 TGGTGAGAAATGGAAGCACA 57.345 45.000 0.00 0.00 0.00 4.57
6217 6453 2.942804 TGGTGAGAAATGGAAGCACAA 58.057 42.857 0.00 0.00 0.00 3.33
6218 6454 3.295093 TGGTGAGAAATGGAAGCACAAA 58.705 40.909 0.00 0.00 0.00 2.83
6219 6455 3.068024 TGGTGAGAAATGGAAGCACAAAC 59.932 43.478 0.00 0.00 0.00 2.93
6220 6456 3.068024 GGTGAGAAATGGAAGCACAAACA 59.932 43.478 0.00 0.00 0.00 2.83
6221 6457 4.293415 GTGAGAAATGGAAGCACAAACAG 58.707 43.478 0.00 0.00 0.00 3.16
6222 6458 4.036734 GTGAGAAATGGAAGCACAAACAGA 59.963 41.667 0.00 0.00 0.00 3.41
6223 6459 4.828939 TGAGAAATGGAAGCACAAACAGAT 59.171 37.500 0.00 0.00 0.00 2.90
6224 6460 5.048504 TGAGAAATGGAAGCACAAACAGATC 60.049 40.000 0.00 0.00 0.00 2.75
6225 6461 4.828939 AGAAATGGAAGCACAAACAGATCA 59.171 37.500 0.00 0.00 0.00 2.92
6226 6462 5.302568 AGAAATGGAAGCACAAACAGATCAA 59.697 36.000 0.00 0.00 0.00 2.57
6227 6463 5.534207 AATGGAAGCACAAACAGATCAAA 57.466 34.783 0.00 0.00 0.00 2.69
6228 6464 4.572985 TGGAAGCACAAACAGATCAAAG 57.427 40.909 0.00 0.00 0.00 2.77
6229 6465 3.953612 TGGAAGCACAAACAGATCAAAGT 59.046 39.130 0.00 0.00 0.00 2.66
6230 6466 5.129634 TGGAAGCACAAACAGATCAAAGTA 58.870 37.500 0.00 0.00 0.00 2.24
6231 6467 5.769662 TGGAAGCACAAACAGATCAAAGTAT 59.230 36.000 0.00 0.00 0.00 2.12
6232 6468 6.088824 GGAAGCACAAACAGATCAAAGTATG 58.911 40.000 0.00 0.00 0.00 2.39
6233 6469 5.051891 AGCACAAACAGATCAAAGTATGC 57.948 39.130 0.00 0.00 0.00 3.14
6234 6470 4.763793 AGCACAAACAGATCAAAGTATGCT 59.236 37.500 0.00 0.43 34.96 3.79
6235 6471 5.242393 AGCACAAACAGATCAAAGTATGCTT 59.758 36.000 0.00 0.00 36.31 3.91
6236 6472 5.922544 GCACAAACAGATCAAAGTATGCTTT 59.077 36.000 2.58 2.58 45.04 3.51
6237 6473 6.421801 GCACAAACAGATCAAAGTATGCTTTT 59.578 34.615 6.00 0.00 42.54 2.27
6238 6474 7.358683 GCACAAACAGATCAAAGTATGCTTTTC 60.359 37.037 6.00 3.17 42.54 2.29
6239 6475 7.864379 CACAAACAGATCAAAGTATGCTTTTCT 59.136 33.333 6.00 5.45 42.54 2.52
6240 6476 8.078596 ACAAACAGATCAAAGTATGCTTTTCTC 58.921 33.333 6.00 6.43 42.54 2.87
6241 6477 7.750229 AACAGATCAAAGTATGCTTTTCTCA 57.250 32.000 6.00 0.00 42.54 3.27
6242 6478 7.934855 ACAGATCAAAGTATGCTTTTCTCAT 57.065 32.000 6.00 0.00 42.54 2.90
6243 6479 9.453572 AACAGATCAAAGTATGCTTTTCTCATA 57.546 29.630 6.00 0.00 42.54 2.15
6244 6480 9.453572 ACAGATCAAAGTATGCTTTTCTCATAA 57.546 29.630 6.00 0.00 42.54 1.90
6245 6481 9.932699 CAGATCAAAGTATGCTTTTCTCATAAG 57.067 33.333 6.00 0.00 42.54 1.73
6246 6482 9.896645 AGATCAAAGTATGCTTTTCTCATAAGA 57.103 29.630 6.00 0.00 42.54 2.10
6248 6484 9.896645 ATCAAAGTATGCTTTTCTCATAAGAGA 57.103 29.630 6.00 0.00 44.11 3.10
6249 6485 9.376075 TCAAAGTATGCTTTTCTCATAAGAGAG 57.624 33.333 6.00 0.00 42.85 3.20
6250 6486 9.376075 CAAAGTATGCTTTTCTCATAAGAGAGA 57.624 33.333 6.00 0.00 42.85 3.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
71 72 1.519234 GACGCGACATGCTCATGGA 60.519 57.895 15.93 0.00 42.91 3.41
87 88 7.278868 CAGAGGGTTAGTGAACTAATTGATGAC 59.721 40.741 6.21 0.00 40.20 3.06
127 131 0.321653 AGGCTGGTGTGTCCGATTTC 60.322 55.000 0.00 0.00 39.52 2.17
128 132 0.110486 AAGGCTGGTGTGTCCGATTT 59.890 50.000 0.00 0.00 39.52 2.17
129 133 0.981183 TAAGGCTGGTGTGTCCGATT 59.019 50.000 0.00 0.00 39.52 3.34
178 182 4.081142 TGGGAATGAGACGAGCTATTTTGA 60.081 41.667 0.00 0.00 0.00 2.69
277 281 6.504398 GGTTTTCCTTCCTCTTTGTTACTTG 58.496 40.000 0.00 0.00 36.94 3.16
526 539 7.040132 GGAAGTTCTTTTGAGATCTGGAAATGT 60.040 37.037 0.00 0.00 0.00 2.71
527 540 7.311408 GGAAGTTCTTTTGAGATCTGGAAATG 58.689 38.462 0.00 1.97 0.00 2.32
538 551 6.581712 TGAAATTTGGGGAAGTTCTTTTGAG 58.418 36.000 2.25 0.00 41.59 3.02
626 641 3.326747 GCGATCCTACATTGGTCCATAC 58.673 50.000 0.00 0.00 0.00 2.39
664 679 3.197790 CCGATGCGGTTGAGCCTG 61.198 66.667 0.00 0.00 42.73 4.85
681 696 1.600023 TCGTGGGTGAATTGGTTGTC 58.400 50.000 0.00 0.00 0.00 3.18
791 808 3.379452 ACCTCCTCCTAATCTGGACAAG 58.621 50.000 0.00 0.00 31.94 3.16
792 809 3.491766 ACCTCCTCCTAATCTGGACAA 57.508 47.619 0.00 0.00 31.94 3.18
793 810 3.107601 CAACCTCCTCCTAATCTGGACA 58.892 50.000 0.00 0.00 31.94 4.02
794 811 3.133183 GTCAACCTCCTCCTAATCTGGAC 59.867 52.174 0.00 0.00 31.94 4.02
795 812 3.375699 GTCAACCTCCTCCTAATCTGGA 58.624 50.000 0.00 0.00 34.52 3.86
796 813 2.436173 GGTCAACCTCCTCCTAATCTGG 59.564 54.545 0.00 0.00 0.00 3.86
797 814 3.379452 AGGTCAACCTCCTCCTAATCTG 58.621 50.000 0.00 0.00 44.77 2.90
798 815 3.786213 AGGTCAACCTCCTCCTAATCT 57.214 47.619 0.00 0.00 44.77 2.40
803 820 9.860393 AAATTATATATAGGTCAACCTCCTCCT 57.140 33.333 4.63 0.00 44.77 3.69
831 848 5.529581 TGGGTCCTTTTTGCTAAAGAAAG 57.470 39.130 11.82 0.00 0.00 2.62
846 863 3.009748 ACCATCATCCATATGGGTCCT 57.990 47.619 21.78 0.75 46.89 3.85
851 868 3.845992 TGGGAGTACCATCATCCATATGG 59.154 47.826 16.25 16.25 46.80 2.74
865 882 0.322546 CTTGGGCCTGTTGGGAGTAC 60.323 60.000 4.53 0.00 37.23 2.73
960 983 2.041405 GGGGAGGGAGTGAGGGAG 60.041 72.222 0.00 0.00 0.00 4.30
961 984 2.056099 TTTGGGGAGGGAGTGAGGGA 62.056 60.000 0.00 0.00 0.00 4.20
962 985 1.541368 TTTGGGGAGGGAGTGAGGG 60.541 63.158 0.00 0.00 0.00 4.30
963 986 1.994463 CTTTGGGGAGGGAGTGAGG 59.006 63.158 0.00 0.00 0.00 3.86
964 987 1.204113 AGCTTTGGGGAGGGAGTGAG 61.204 60.000 0.00 0.00 0.00 3.51
965 988 1.151810 AGCTTTGGGGAGGGAGTGA 60.152 57.895 0.00 0.00 0.00 3.41
966 989 1.301293 GAGCTTTGGGGAGGGAGTG 59.699 63.158 0.00 0.00 0.00 3.51
985 1008 2.202932 CATTGGAGGGGACGAGCG 60.203 66.667 0.00 0.00 0.00 5.03
990 1013 1.379044 CAGTGCCATTGGAGGGGAC 60.379 63.158 6.95 0.00 46.05 4.46
995 1018 1.093159 GAAGAGCAGTGCCATTGGAG 58.907 55.000 12.58 0.00 0.00 3.86
1089 1112 1.313772 GAGAGGAGACGCTGCTGATA 58.686 55.000 5.68 0.00 42.18 2.15
1176 1199 1.376037 CTTCCTTGTCTCCGTGCCC 60.376 63.158 0.00 0.00 0.00 5.36
1187 1210 4.530161 TCCTCCTCTTCTTCTTCTTCCTTG 59.470 45.833 0.00 0.00 0.00 3.61
1321 1344 3.788766 CTCCGCGCCCTCGTTTTG 61.789 66.667 0.00 0.00 38.14 2.44
1422 1445 1.492133 CCTTGTCCTTGCCCTCTCCA 61.492 60.000 0.00 0.00 0.00 3.86
1443 1466 3.047280 TGTGCCACGCCGTCATTC 61.047 61.111 0.00 0.00 0.00 2.67
1765 1788 2.789339 GCGGAAAAGAAGAACTTGTTGC 59.211 45.455 0.00 0.00 38.98 4.17
1842 1865 0.035458 AGCTTACACTGCTTCGCCTT 59.965 50.000 0.00 0.00 37.52 4.35
2001 2030 1.227674 GTTGCTATGCCTCCCTCGG 60.228 63.158 0.00 0.00 0.00 4.63
2165 2194 0.460987 CCTCATCTTGACCACCTCGC 60.461 60.000 0.00 0.00 0.00 5.03
2395 2425 3.200825 CCCTGACCTCCATATCACAGTTT 59.799 47.826 0.00 0.00 0.00 2.66
2436 2466 4.282449 TCGAAGGTTGTAGTTCATTCCTCA 59.718 41.667 0.00 0.00 32.61 3.86
2463 2493 3.772932 CAATTTTGGCGTATGACTGCAT 58.227 40.909 0.00 0.00 38.54 3.96
2582 2612 3.056962 TGCGCTCAATAATTGGCTTTTGA 60.057 39.130 9.73 0.00 0.00 2.69
2608 2638 1.063912 CGTCTGCACTTGACTTTTGCA 59.936 47.619 3.43 0.00 43.89 4.08
2772 2802 1.310933 GCAAGTCAGCATCCACAGGG 61.311 60.000 0.00 0.00 0.00 4.45
2773 2803 0.322277 AGCAAGTCAGCATCCACAGG 60.322 55.000 0.00 0.00 36.85 4.00
2774 2804 1.467734 GAAGCAAGTCAGCATCCACAG 59.532 52.381 0.00 0.00 36.85 3.66
2775 2805 1.527034 GAAGCAAGTCAGCATCCACA 58.473 50.000 0.00 0.00 36.85 4.17
2779 2809 1.372087 CCGGGAAGCAAGTCAGCATC 61.372 60.000 0.00 0.00 36.85 3.91
2780 2810 1.377725 CCGGGAAGCAAGTCAGCAT 60.378 57.895 0.00 0.00 36.85 3.79
2781 2811 2.032528 CCGGGAAGCAAGTCAGCA 59.967 61.111 0.00 0.00 36.85 4.41
2782 2812 1.172812 AAACCGGGAAGCAAGTCAGC 61.173 55.000 6.32 0.00 0.00 4.26
2783 2813 2.076863 CTAAACCGGGAAGCAAGTCAG 58.923 52.381 6.32 0.00 0.00 3.51
2784 2814 1.418637 ACTAAACCGGGAAGCAAGTCA 59.581 47.619 6.32 0.00 0.00 3.41
2785 2815 2.180432 ACTAAACCGGGAAGCAAGTC 57.820 50.000 6.32 0.00 0.00 3.01
2786 2816 2.501261 GAACTAAACCGGGAAGCAAGT 58.499 47.619 6.32 0.00 0.00 3.16
2787 2817 1.810755 GGAACTAAACCGGGAAGCAAG 59.189 52.381 6.32 0.00 0.00 4.01
3009 3040 1.850345 TGTTCCCTGTTTCTCCCTGTT 59.150 47.619 0.00 0.00 0.00 3.16
3110 3141 2.855953 GCCATTCTATCGTTGCATGTGC 60.856 50.000 0.00 0.00 42.50 4.57
3302 3334 9.912634 CAAGGTTTCAAACAGTATGATTTATGT 57.087 29.630 1.93 0.00 39.69 2.29
3402 3436 9.018582 AGAAGAATCAACAGGGAAAGATAAAAG 57.981 33.333 0.00 0.00 0.00 2.27
3412 3446 4.982241 ACTTCAGAAGAATCAACAGGGA 57.018 40.909 17.56 0.00 32.31 4.20
3469 3503 1.134818 TGCATAGGCTGTAACGTGAGG 60.135 52.381 0.00 0.00 41.91 3.86
3613 3650 4.912133 ACCAAGACCTTCCTTACTTTAGGT 59.088 41.667 0.00 0.00 43.48 3.08
3691 3728 5.065731 GGGAGTAATTGAGTCTGATGCTTTG 59.934 44.000 0.00 0.00 0.00 2.77
3702 3739 2.858644 TGGGGATGGGAGTAATTGAGT 58.141 47.619 0.00 0.00 0.00 3.41
3966 4003 6.821388 TCTAAATATGGAGAGAGAAAGTGCC 58.179 40.000 0.00 0.00 0.00 5.01
3967 4004 8.723942 TTTCTAAATATGGAGAGAGAAAGTGC 57.276 34.615 0.00 0.00 31.24 4.40
4244 4283 3.610040 TGAGATGTTCACCTATGCGTT 57.390 42.857 0.00 0.00 0.00 4.84
4342 4382 2.611292 GACCAATTCTCGATGCTTCCAG 59.389 50.000 0.00 0.00 0.00 3.86
4429 4469 1.901591 CAATGAGCACACCTCCACTT 58.098 50.000 0.00 0.00 39.98 3.16
4639 4679 5.428253 TCAGCCATCCGATATATAAAAGGC 58.572 41.667 0.00 0.00 39.82 4.35
4687 4727 2.070262 TGTGTCGCAGAACTGAGATG 57.930 50.000 10.92 0.00 41.22 2.90
4764 4804 9.912634 CAAGAAGAGCTAACATGGAAAAATTAA 57.087 29.630 0.00 0.00 0.00 1.40
4781 4821 1.297664 AGCGCATCATCAAGAAGAGC 58.702 50.000 11.47 0.00 40.39 4.09
4837 4877 0.955919 CGTCCTGTTTTCTCCCAGCC 60.956 60.000 0.00 0.00 0.00 4.85
4952 5058 2.226912 TGCGGGAAACGGTTCTTTAATG 59.773 45.455 13.88 0.00 44.51 1.90
4957 5063 1.792118 GCTTGCGGGAAACGGTTCTT 61.792 55.000 13.88 0.00 44.51 2.52
5144 5370 2.898729 GCAGAAGCTACCTATCAGCA 57.101 50.000 0.00 0.00 41.66 4.41
5370 5597 0.737715 CTGTAGCAGTGCCGAACTCC 60.738 60.000 12.58 0.00 36.83 3.85
5474 5701 2.991190 GCAAAATGATGCCACTGAAGTG 59.009 45.455 3.35 3.35 45.23 3.16
5559 5790 1.069022 CGAAGAAACACCAGCCATGTG 60.069 52.381 0.00 0.00 39.63 3.21
5560 5791 1.238439 CGAAGAAACACCAGCCATGT 58.762 50.000 0.00 0.00 0.00 3.21
5561 5792 0.523072 CCGAAGAAACACCAGCCATG 59.477 55.000 0.00 0.00 0.00 3.66
5562 5793 0.400213 TCCGAAGAAACACCAGCCAT 59.600 50.000 0.00 0.00 0.00 4.40
5563 5794 0.181587 TTCCGAAGAAACACCAGCCA 59.818 50.000 0.00 0.00 0.00 4.75
5596 5831 3.074412 CTGGTTCATACACACTTCCACC 58.926 50.000 0.00 0.00 0.00 4.61
5693 5928 4.867047 ACAAACGAACACATGAATTTTGCA 59.133 33.333 0.00 0.00 0.00 4.08
5710 5945 1.602668 CCATCCAAACAGGCACAAACG 60.603 52.381 0.00 0.00 37.29 3.60
5729 5964 5.913137 TTCCACATGAAAACATACATCCC 57.087 39.130 0.00 0.00 0.00 3.85
5771 6007 5.464069 AGAACACCCCAGGAATTACTTTTT 58.536 37.500 0.00 0.00 0.00 1.94
5775 6011 4.141018 ACAAAGAACACCCCAGGAATTACT 60.141 41.667 0.00 0.00 0.00 2.24
5784 6020 3.053544 TCCTACAAACAAAGAACACCCCA 60.054 43.478 0.00 0.00 0.00 4.96
5785 6021 3.558033 TCCTACAAACAAAGAACACCCC 58.442 45.455 0.00 0.00 0.00 4.95
5786 6022 5.508994 CCAATCCTACAAACAAAGAACACCC 60.509 44.000 0.00 0.00 0.00 4.61
5787 6023 5.300792 TCCAATCCTACAAACAAAGAACACC 59.699 40.000 0.00 0.00 0.00 4.16
5788 6024 6.206498 GTCCAATCCTACAAACAAAGAACAC 58.794 40.000 0.00 0.00 0.00 3.32
5789 6025 5.300792 GGTCCAATCCTACAAACAAAGAACA 59.699 40.000 0.00 0.00 0.00 3.18
5790 6026 5.300792 TGGTCCAATCCTACAAACAAAGAAC 59.699 40.000 0.00 0.00 0.00 3.01
5791 6027 5.300792 GTGGTCCAATCCTACAAACAAAGAA 59.699 40.000 0.00 0.00 0.00 2.52
5792 6028 4.825085 GTGGTCCAATCCTACAAACAAAGA 59.175 41.667 0.00 0.00 0.00 2.52
5793 6029 4.582656 TGTGGTCCAATCCTACAAACAAAG 59.417 41.667 0.00 0.00 0.00 2.77
5794 6030 4.537751 TGTGGTCCAATCCTACAAACAAA 58.462 39.130 0.00 0.00 0.00 2.83
5795 6031 4.171878 TGTGGTCCAATCCTACAAACAA 57.828 40.909 0.00 0.00 0.00 2.83
5796 6032 3.866703 TGTGGTCCAATCCTACAAACA 57.133 42.857 0.00 0.00 0.00 2.83
5797 6033 5.523438 TTTTGTGGTCCAATCCTACAAAC 57.477 39.130 0.00 0.00 37.74 2.93
5798 6034 6.739331 ATTTTTGTGGTCCAATCCTACAAA 57.261 33.333 0.00 0.00 37.06 2.83
5799 6035 7.893302 AGATATTTTTGTGGTCCAATCCTACAA 59.107 33.333 0.00 0.00 31.81 2.41
5800 6036 7.410174 AGATATTTTTGTGGTCCAATCCTACA 58.590 34.615 0.00 0.00 31.81 2.74
5801 6037 7.881775 AGATATTTTTGTGGTCCAATCCTAC 57.118 36.000 0.00 0.00 31.81 3.18
5802 6038 9.627123 CTAAGATATTTTTGTGGTCCAATCCTA 57.373 33.333 0.00 0.00 31.81 2.94
5803 6039 8.336235 TCTAAGATATTTTTGTGGTCCAATCCT 58.664 33.333 0.00 0.00 31.81 3.24
5804 6040 8.519799 TCTAAGATATTTTTGTGGTCCAATCC 57.480 34.615 0.00 0.00 31.81 3.01
5807 6043 9.753674 AGATTCTAAGATATTTTTGTGGTCCAA 57.246 29.630 0.00 0.00 0.00 3.53
5808 6044 9.753674 AAGATTCTAAGATATTTTTGTGGTCCA 57.246 29.630 0.00 0.00 0.00 4.02
5834 6070 7.284074 TGTGAACAGAGGGAGTACAATAAAAA 58.716 34.615 0.00 0.00 0.00 1.94
5835 6071 6.833041 TGTGAACAGAGGGAGTACAATAAAA 58.167 36.000 0.00 0.00 0.00 1.52
5836 6072 6.428083 TGTGAACAGAGGGAGTACAATAAA 57.572 37.500 0.00 0.00 0.00 1.40
5837 6073 6.428083 TTGTGAACAGAGGGAGTACAATAA 57.572 37.500 0.00 0.00 0.00 1.40
5838 6074 6.428083 TTTGTGAACAGAGGGAGTACAATA 57.572 37.500 0.00 0.00 0.00 1.90
5839 6075 4.974645 TTGTGAACAGAGGGAGTACAAT 57.025 40.909 0.00 0.00 0.00 2.71
5840 6076 4.764050 TTTGTGAACAGAGGGAGTACAA 57.236 40.909 0.00 0.00 0.00 2.41
5841 6077 4.974645 ATTTGTGAACAGAGGGAGTACA 57.025 40.909 0.00 0.00 0.00 2.90
5842 6078 8.475639 TCTTATATTTGTGAACAGAGGGAGTAC 58.524 37.037 0.00 0.00 0.00 2.73
5843 6079 8.603898 TCTTATATTTGTGAACAGAGGGAGTA 57.396 34.615 0.00 0.00 0.00 2.59
5844 6080 7.496346 TCTTATATTTGTGAACAGAGGGAGT 57.504 36.000 0.00 0.00 0.00 3.85
5845 6081 7.989741 ACATCTTATATTTGTGAACAGAGGGAG 59.010 37.037 0.00 0.00 0.00 4.30
5846 6082 7.861629 ACATCTTATATTTGTGAACAGAGGGA 58.138 34.615 0.00 0.00 0.00 4.20
5847 6083 8.511604 AACATCTTATATTTGTGAACAGAGGG 57.488 34.615 0.00 0.00 0.00 4.30
5886 6122 9.988350 GTTCACTCATTTCAATTCGTATGTAAT 57.012 29.630 0.00 0.00 0.00 1.89
5887 6123 8.994170 TGTTCACTCATTTCAATTCGTATGTAA 58.006 29.630 0.00 0.00 0.00 2.41
5888 6124 8.541133 TGTTCACTCATTTCAATTCGTATGTA 57.459 30.769 0.00 0.00 0.00 2.29
5889 6125 7.433708 TGTTCACTCATTTCAATTCGTATGT 57.566 32.000 0.00 0.00 0.00 2.29
5890 6126 8.629986 GTTTGTTCACTCATTTCAATTCGTATG 58.370 33.333 0.00 0.00 0.00 2.39
5891 6127 8.349245 TGTTTGTTCACTCATTTCAATTCGTAT 58.651 29.630 0.00 0.00 0.00 3.06
5892 6128 7.698628 TGTTTGTTCACTCATTTCAATTCGTA 58.301 30.769 0.00 0.00 0.00 3.43
5893 6129 6.559810 TGTTTGTTCACTCATTTCAATTCGT 58.440 32.000 0.00 0.00 0.00 3.85
5894 6130 7.627585 ATGTTTGTTCACTCATTTCAATTCG 57.372 32.000 0.00 0.00 0.00 3.34
5895 6131 9.683069 AGTATGTTTGTTCACTCATTTCAATTC 57.317 29.630 0.00 0.00 0.00 2.17
5903 6139 9.897744 CATGTTTTAGTATGTTTGTTCACTCAT 57.102 29.630 0.00 0.00 0.00 2.90
5904 6140 8.898761 ACATGTTTTAGTATGTTTGTTCACTCA 58.101 29.630 0.00 0.00 34.00 3.41
5905 6141 9.730420 AACATGTTTTAGTATGTTTGTTCACTC 57.270 29.630 4.92 0.00 43.00 3.51
5919 6155 9.841295 ATCGGGTGTATATAAACATGTTTTAGT 57.159 29.630 27.66 16.48 34.23 2.24
5922 6158 9.179909 TGAATCGGGTGTATATAAACATGTTTT 57.820 29.630 27.66 17.34 34.23 2.43
5923 6159 8.617809 GTGAATCGGGTGTATATAAACATGTTT 58.382 33.333 25.99 25.99 36.63 2.83
5924 6160 7.771361 TGTGAATCGGGTGTATATAAACATGTT 59.229 33.333 4.92 4.92 0.00 2.71
5925 6161 7.276658 TGTGAATCGGGTGTATATAAACATGT 58.723 34.615 5.42 0.00 0.00 3.21
5926 6162 7.722795 TGTGAATCGGGTGTATATAAACATG 57.277 36.000 5.42 0.00 0.00 3.21
5927 6163 8.740123 TTTGTGAATCGGGTGTATATAAACAT 57.260 30.769 5.42 0.00 0.00 2.71
5928 6164 8.563123 TTTTGTGAATCGGGTGTATATAAACA 57.437 30.769 5.42 0.00 0.00 2.83
5929 6165 8.885722 TCTTTTGTGAATCGGGTGTATATAAAC 58.114 33.333 0.00 0.00 0.00 2.01
5930 6166 9.451002 TTCTTTTGTGAATCGGGTGTATATAAA 57.549 29.630 0.00 0.00 0.00 1.40
5931 6167 9.621629 ATTCTTTTGTGAATCGGGTGTATATAA 57.378 29.630 0.00 0.00 31.72 0.98
5933 6169 9.621629 TTATTCTTTTGTGAATCGGGTGTATAT 57.378 29.630 0.00 0.00 37.73 0.86
5934 6170 9.104965 CTTATTCTTTTGTGAATCGGGTGTATA 57.895 33.333 0.00 0.00 37.73 1.47
5935 6171 7.827236 TCTTATTCTTTTGTGAATCGGGTGTAT 59.173 33.333 0.00 0.00 37.73 2.29
5936 6172 7.162761 TCTTATTCTTTTGTGAATCGGGTGTA 58.837 34.615 0.00 0.00 37.73 2.90
5937 6173 6.001460 TCTTATTCTTTTGTGAATCGGGTGT 58.999 36.000 0.00 0.00 37.73 4.16
5938 6174 6.494893 TCTTATTCTTTTGTGAATCGGGTG 57.505 37.500 0.00 0.00 37.73 4.61
5939 6175 6.488683 TGTTCTTATTCTTTTGTGAATCGGGT 59.511 34.615 0.00 0.00 37.73 5.28
5940 6176 6.908825 TGTTCTTATTCTTTTGTGAATCGGG 58.091 36.000 0.00 0.00 37.73 5.14
5941 6177 8.970691 AATGTTCTTATTCTTTTGTGAATCGG 57.029 30.769 0.00 0.00 37.73 4.18
5958 6194 9.398170 CTTCATTCACGAATACAAAATGTTCTT 57.602 29.630 0.00 0.00 0.00 2.52
5959 6195 8.023128 CCTTCATTCACGAATACAAAATGTTCT 58.977 33.333 0.00 0.00 0.00 3.01
5960 6196 7.273381 CCCTTCATTCACGAATACAAAATGTTC 59.727 37.037 0.00 0.00 0.00 3.18
5961 6197 7.040062 TCCCTTCATTCACGAATACAAAATGTT 60.040 33.333 0.00 0.00 0.00 2.71
5962 6198 6.432783 TCCCTTCATTCACGAATACAAAATGT 59.567 34.615 0.00 0.00 0.00 2.71
5963 6199 6.851609 TCCCTTCATTCACGAATACAAAATG 58.148 36.000 0.00 0.00 0.00 2.32
5964 6200 6.659242 ACTCCCTTCATTCACGAATACAAAAT 59.341 34.615 0.00 0.00 0.00 1.82
5965 6201 6.001460 ACTCCCTTCATTCACGAATACAAAA 58.999 36.000 0.00 0.00 0.00 2.44
5966 6202 5.556915 ACTCCCTTCATTCACGAATACAAA 58.443 37.500 0.00 0.00 0.00 2.83
5967 6203 5.160607 ACTCCCTTCATTCACGAATACAA 57.839 39.130 0.00 0.00 0.00 2.41
5968 6204 4.819105 ACTCCCTTCATTCACGAATACA 57.181 40.909 0.00 0.00 0.00 2.29
5969 6205 5.749109 CACTACTCCCTTCATTCACGAATAC 59.251 44.000 0.00 0.00 0.00 1.89
5970 6206 5.163447 CCACTACTCCCTTCATTCACGAATA 60.163 44.000 0.00 0.00 0.00 1.75
5971 6207 4.383118 CCACTACTCCCTTCATTCACGAAT 60.383 45.833 0.00 0.00 0.00 3.34
5972 6208 3.056107 CCACTACTCCCTTCATTCACGAA 60.056 47.826 0.00 0.00 0.00 3.85
5973 6209 2.496070 CCACTACTCCCTTCATTCACGA 59.504 50.000 0.00 0.00 0.00 4.35
5974 6210 2.893637 CCACTACTCCCTTCATTCACG 58.106 52.381 0.00 0.00 0.00 4.35
5975 6211 2.027192 TGCCACTACTCCCTTCATTCAC 60.027 50.000 0.00 0.00 0.00 3.18
5976 6212 2.265367 TGCCACTACTCCCTTCATTCA 58.735 47.619 0.00 0.00 0.00 2.57
5977 6213 3.350219 TTGCCACTACTCCCTTCATTC 57.650 47.619 0.00 0.00 0.00 2.67
5978 6214 3.806949 TTTGCCACTACTCCCTTCATT 57.193 42.857 0.00 0.00 0.00 2.57
5979 6215 3.806949 TTTTGCCACTACTCCCTTCAT 57.193 42.857 0.00 0.00 0.00 2.57
5980 6216 3.181434 ACATTTTGCCACTACTCCCTTCA 60.181 43.478 0.00 0.00 0.00 3.02
5981 6217 3.191371 CACATTTTGCCACTACTCCCTTC 59.809 47.826 0.00 0.00 0.00 3.46
5982 6218 3.157087 CACATTTTGCCACTACTCCCTT 58.843 45.455 0.00 0.00 0.00 3.95
5983 6219 2.108250 ACACATTTTGCCACTACTCCCT 59.892 45.455 0.00 0.00 0.00 4.20
5984 6220 2.228822 CACACATTTTGCCACTACTCCC 59.771 50.000 0.00 0.00 0.00 4.30
5985 6221 2.351738 GCACACATTTTGCCACTACTCC 60.352 50.000 0.00 0.00 33.58 3.85
5986 6222 2.293122 TGCACACATTTTGCCACTACTC 59.707 45.455 0.00 0.00 39.39 2.59
5987 6223 2.305928 TGCACACATTTTGCCACTACT 58.694 42.857 0.00 0.00 39.39 2.57
5988 6224 2.791383 TGCACACATTTTGCCACTAC 57.209 45.000 0.00 0.00 39.39 2.73
5989 6225 2.954989 TCTTGCACACATTTTGCCACTA 59.045 40.909 0.00 0.00 39.39 2.74
5990 6226 1.755959 TCTTGCACACATTTTGCCACT 59.244 42.857 0.00 0.00 39.39 4.00
5991 6227 2.222007 TCTTGCACACATTTTGCCAC 57.778 45.000 0.00 0.00 39.39 5.01
5992 6228 2.975732 TTCTTGCACACATTTTGCCA 57.024 40.000 0.00 0.00 39.39 4.92
5993 6229 4.612932 TTTTTCTTGCACACATTTTGCC 57.387 36.364 0.00 0.00 39.39 4.52
6011 6247 5.722021 AGATACATTTCCTTGGCGTTTTT 57.278 34.783 0.00 0.00 0.00 1.94
6012 6248 5.163794 CGTAGATACATTTCCTTGGCGTTTT 60.164 40.000 0.00 0.00 0.00 2.43
6013 6249 4.331717 CGTAGATACATTTCCTTGGCGTTT 59.668 41.667 0.00 0.00 0.00 3.60
6014 6250 3.869246 CGTAGATACATTTCCTTGGCGTT 59.131 43.478 0.00 0.00 0.00 4.84
6015 6251 3.454375 CGTAGATACATTTCCTTGGCGT 58.546 45.455 0.00 0.00 0.00 5.68
6016 6252 2.800544 CCGTAGATACATTTCCTTGGCG 59.199 50.000 0.00 0.00 0.00 5.69
6017 6253 4.067972 TCCGTAGATACATTTCCTTGGC 57.932 45.455 0.00 0.00 0.00 4.52
6018 6254 5.049405 GCAATCCGTAGATACATTTCCTTGG 60.049 44.000 0.00 0.00 30.42 3.61
6019 6255 5.527214 TGCAATCCGTAGATACATTTCCTTG 59.473 40.000 0.00 0.00 30.42 3.61
6020 6256 5.680619 TGCAATCCGTAGATACATTTCCTT 58.319 37.500 0.00 0.00 30.42 3.36
6021 6257 5.290493 TGCAATCCGTAGATACATTTCCT 57.710 39.130 0.00 0.00 30.42 3.36
6022 6258 5.558273 CGTTGCAATCCGTAGATACATTTCC 60.558 44.000 0.59 0.00 30.42 3.13
6023 6259 5.233476 TCGTTGCAATCCGTAGATACATTTC 59.767 40.000 0.59 0.00 30.42 2.17
6024 6260 5.113383 TCGTTGCAATCCGTAGATACATTT 58.887 37.500 0.59 0.00 30.42 2.32
6025 6261 4.689071 TCGTTGCAATCCGTAGATACATT 58.311 39.130 0.59 0.00 30.42 2.71
6026 6262 4.316205 TCGTTGCAATCCGTAGATACAT 57.684 40.909 0.59 0.00 30.42 2.29
6027 6263 3.786516 TCGTTGCAATCCGTAGATACA 57.213 42.857 0.59 0.00 30.42 2.29
6028 6264 3.861113 TGTTCGTTGCAATCCGTAGATAC 59.139 43.478 0.59 0.00 30.42 2.24
6029 6265 4.112716 TGTTCGTTGCAATCCGTAGATA 57.887 40.909 0.59 0.00 30.42 1.98
6030 6266 2.967362 TGTTCGTTGCAATCCGTAGAT 58.033 42.857 0.59 0.00 0.00 1.98
6031 6267 2.442212 TGTTCGTTGCAATCCGTAGA 57.558 45.000 0.59 0.00 0.00 2.59
6032 6268 3.529634 TTTGTTCGTTGCAATCCGTAG 57.470 42.857 0.59 0.00 0.00 3.51
6033 6269 3.965292 TTTTGTTCGTTGCAATCCGTA 57.035 38.095 0.59 0.00 0.00 4.02
6034 6270 2.853731 TTTTGTTCGTTGCAATCCGT 57.146 40.000 0.59 0.00 0.00 4.69
6035 6271 3.119463 GTCATTTTGTTCGTTGCAATCCG 59.881 43.478 0.59 2.16 0.00 4.18
6036 6272 4.047822 TGTCATTTTGTTCGTTGCAATCC 58.952 39.130 0.59 0.00 0.00 3.01
6037 6273 5.633996 TTGTCATTTTGTTCGTTGCAATC 57.366 34.783 0.59 0.00 0.00 2.67
6038 6274 6.601741 ATTTGTCATTTTGTTCGTTGCAAT 57.398 29.167 0.59 0.00 0.00 3.56
6039 6275 7.525688 TTATTTGTCATTTTGTTCGTTGCAA 57.474 28.000 0.00 0.00 0.00 4.08
6040 6276 7.525688 TTTATTTGTCATTTTGTTCGTTGCA 57.474 28.000 0.00 0.00 0.00 4.08
6041 6277 8.813263 TTTTTATTTGTCATTTTGTTCGTTGC 57.187 26.923 0.00 0.00 0.00 4.17
6063 6299 7.065683 GGATTTTATTCCCGCATGTGAATTTTT 59.934 33.333 8.11 0.00 33.46 1.94
6064 6300 6.538381 GGATTTTATTCCCGCATGTGAATTTT 59.462 34.615 8.11 0.00 33.46 1.82
6065 6301 6.048509 GGATTTTATTCCCGCATGTGAATTT 58.951 36.000 8.11 0.00 33.46 1.82
6066 6302 5.363580 AGGATTTTATTCCCGCATGTGAATT 59.636 36.000 8.11 0.00 36.35 2.17
6067 6303 4.895297 AGGATTTTATTCCCGCATGTGAAT 59.105 37.500 8.11 9.73 36.35 2.57
6068 6304 4.277476 AGGATTTTATTCCCGCATGTGAA 58.723 39.130 8.11 2.37 36.35 3.18
6069 6305 3.882888 GAGGATTTTATTCCCGCATGTGA 59.117 43.478 8.11 0.00 36.35 3.58
6070 6306 3.004734 GGAGGATTTTATTCCCGCATGTG 59.995 47.826 0.00 0.00 36.35 3.21
6071 6307 3.222603 GGAGGATTTTATTCCCGCATGT 58.777 45.455 0.00 0.00 36.35 3.21
6072 6308 3.221771 TGGAGGATTTTATTCCCGCATG 58.778 45.455 0.00 0.00 36.35 4.06
6073 6309 3.138283 TCTGGAGGATTTTATTCCCGCAT 59.862 43.478 0.00 0.00 36.35 4.73
6074 6310 2.507886 TCTGGAGGATTTTATTCCCGCA 59.492 45.455 0.00 0.00 36.35 5.69
6075 6311 3.208747 TCTGGAGGATTTTATTCCCGC 57.791 47.619 0.00 0.00 36.35 6.13
6076 6312 6.715347 ATTTTCTGGAGGATTTTATTCCCG 57.285 37.500 0.00 0.00 36.35 5.14
6077 6313 9.367160 TCATATTTTCTGGAGGATTTTATTCCC 57.633 33.333 0.00 0.00 36.35 3.97
6082 6318 9.189156 CCAAGTCATATTTTCTGGAGGATTTTA 57.811 33.333 0.00 0.00 0.00 1.52
6083 6319 7.895429 TCCAAGTCATATTTTCTGGAGGATTTT 59.105 33.333 0.00 0.00 0.00 1.82
6084 6320 7.340487 GTCCAAGTCATATTTTCTGGAGGATTT 59.660 37.037 0.00 0.00 0.00 2.17
6085 6321 6.830838 GTCCAAGTCATATTTTCTGGAGGATT 59.169 38.462 0.00 0.00 0.00 3.01
6086 6322 6.069440 TGTCCAAGTCATATTTTCTGGAGGAT 60.069 38.462 0.00 0.00 0.00 3.24
6087 6323 5.250543 TGTCCAAGTCATATTTTCTGGAGGA 59.749 40.000 0.00 0.00 0.00 3.71
6088 6324 5.500234 TGTCCAAGTCATATTTTCTGGAGG 58.500 41.667 0.00 0.00 0.00 4.30
6089 6325 6.825213 TGATGTCCAAGTCATATTTTCTGGAG 59.175 38.462 0.00 0.00 0.00 3.86
6090 6326 6.720309 TGATGTCCAAGTCATATTTTCTGGA 58.280 36.000 0.00 0.00 0.00 3.86
6091 6327 7.395190 TTGATGTCCAAGTCATATTTTCTGG 57.605 36.000 0.00 0.00 0.00 3.86
6092 6328 9.512435 GAATTGATGTCCAAGTCATATTTTCTG 57.488 33.333 0.00 0.00 46.01 3.02
6102 6338 7.383102 AGTACATTGAATTGATGTCCAAGTC 57.617 36.000 7.19 0.00 46.67 3.01
6103 6339 7.064609 CGTAGTACATTGAATTGATGTCCAAGT 59.935 37.037 7.19 0.00 38.58 3.16
6104 6340 7.277760 TCGTAGTACATTGAATTGATGTCCAAG 59.722 37.037 7.19 0.27 38.58 3.61
6105 6341 7.100409 TCGTAGTACATTGAATTGATGTCCAA 58.900 34.615 7.19 0.00 38.58 3.53
6106 6342 6.635755 TCGTAGTACATTGAATTGATGTCCA 58.364 36.000 7.19 0.00 38.58 4.02
6107 6343 6.201044 CCTCGTAGTACATTGAATTGATGTCC 59.799 42.308 7.19 0.00 38.58 4.02
6108 6344 6.757010 ACCTCGTAGTACATTGAATTGATGTC 59.243 38.462 7.19 2.04 38.58 3.06
6109 6345 6.640518 ACCTCGTAGTACATTGAATTGATGT 58.359 36.000 0.38 8.59 40.59 3.06
6110 6346 7.539712 AACCTCGTAGTACATTGAATTGATG 57.460 36.000 0.38 0.00 0.00 3.07
6111 6347 8.561738 AAAACCTCGTAGTACATTGAATTGAT 57.438 30.769 0.38 0.00 0.00 2.57
6112 6348 7.972832 AAAACCTCGTAGTACATTGAATTGA 57.027 32.000 0.38 0.00 0.00 2.57
6113 6349 7.896274 CGTAAAACCTCGTAGTACATTGAATTG 59.104 37.037 0.38 0.00 0.00 2.32
6114 6350 7.599998 ACGTAAAACCTCGTAGTACATTGAATT 59.400 33.333 0.38 0.00 38.52 2.17
6115 6351 7.092716 ACGTAAAACCTCGTAGTACATTGAAT 58.907 34.615 0.38 0.00 38.52 2.57
6116 6352 6.446318 ACGTAAAACCTCGTAGTACATTGAA 58.554 36.000 0.38 0.00 38.52 2.69
6117 6353 6.012658 ACGTAAAACCTCGTAGTACATTGA 57.987 37.500 0.38 0.00 38.52 2.57
6118 6354 6.695292 AACGTAAAACCTCGTAGTACATTG 57.305 37.500 0.38 0.00 39.39 2.82
6119 6355 7.147976 AGAAACGTAAAACCTCGTAGTACATT 58.852 34.615 0.38 0.00 39.39 2.71
6120 6356 6.681777 AGAAACGTAAAACCTCGTAGTACAT 58.318 36.000 0.38 0.00 39.39 2.29
6121 6357 6.072112 AGAAACGTAAAACCTCGTAGTACA 57.928 37.500 0.38 0.00 39.39 2.90
6122 6358 5.281609 CGAGAAACGTAAAACCTCGTAGTAC 59.718 44.000 13.23 0.00 41.02 2.73
6123 6359 5.382303 CGAGAAACGTAAAACCTCGTAGTA 58.618 41.667 13.23 0.00 41.02 1.82
6124 6360 4.222114 CGAGAAACGTAAAACCTCGTAGT 58.778 43.478 13.23 0.00 41.02 2.73
6125 6361 3.058651 GCGAGAAACGTAAAACCTCGTAG 59.941 47.826 18.80 1.79 45.76 3.51
6126 6362 2.979813 GCGAGAAACGTAAAACCTCGTA 59.020 45.455 18.80 0.00 45.76 3.43
6127 6363 1.788886 GCGAGAAACGTAAAACCTCGT 59.211 47.619 18.80 0.00 45.76 4.18
6128 6364 2.056577 AGCGAGAAACGTAAAACCTCG 58.943 47.619 15.65 15.65 46.48 4.63
6129 6365 4.463515 AAAGCGAGAAACGTAAAACCTC 57.536 40.909 0.00 0.00 44.60 3.85
6130 6366 4.333372 TCAAAAGCGAGAAACGTAAAACCT 59.667 37.500 0.00 0.00 44.60 3.50
6131 6367 4.590226 TCAAAAGCGAGAAACGTAAAACC 58.410 39.130 0.00 0.00 44.60 3.27
6132 6368 6.290904 CCTTTCAAAAGCGAGAAACGTAAAAC 60.291 38.462 0.00 0.00 44.60 2.43
6133 6369 5.740099 CCTTTCAAAAGCGAGAAACGTAAAA 59.260 36.000 0.00 0.00 44.60 1.52
6134 6370 5.267776 CCTTTCAAAAGCGAGAAACGTAAA 58.732 37.500 0.00 0.00 44.60 2.01
6135 6371 4.787245 GCCTTTCAAAAGCGAGAAACGTAA 60.787 41.667 0.00 0.00 44.60 3.18
6136 6372 3.303526 GCCTTTCAAAAGCGAGAAACGTA 60.304 43.478 0.00 0.00 44.60 3.57
6137 6373 2.540973 GCCTTTCAAAAGCGAGAAACGT 60.541 45.455 0.00 0.00 44.60 3.99
6138 6374 2.044135 GCCTTTCAAAAGCGAGAAACG 58.956 47.619 0.00 0.00 45.66 3.60
6139 6375 2.044135 CGCCTTTCAAAAGCGAGAAAC 58.956 47.619 7.37 0.00 37.57 2.78
6140 6376 1.599419 GCGCCTTTCAAAAGCGAGAAA 60.599 47.619 17.30 0.00 37.57 2.52
6141 6377 0.040425 GCGCCTTTCAAAAGCGAGAA 60.040 50.000 17.30 0.00 37.57 2.87
6142 6378 0.884704 AGCGCCTTTCAAAAGCGAGA 60.885 50.000 17.30 0.00 37.57 4.04
6143 6379 0.453449 GAGCGCCTTTCAAAAGCGAG 60.453 55.000 17.30 5.49 37.57 5.03
6144 6380 0.884704 AGAGCGCCTTTCAAAAGCGA 60.885 50.000 17.30 0.00 37.57 4.93
6145 6381 0.453449 GAGAGCGCCTTTCAAAAGCG 60.453 55.000 8.83 8.83 38.03 4.68
6146 6382 0.877743 AGAGAGCGCCTTTCAAAAGC 59.122 50.000 2.29 0.00 34.69 3.51
6147 6383 4.393062 TCAATAGAGAGCGCCTTTCAAAAG 59.607 41.667 2.29 0.00 35.79 2.27
6148 6384 4.323417 TCAATAGAGAGCGCCTTTCAAAA 58.677 39.130 2.29 0.00 0.00 2.44
6149 6385 3.937814 TCAATAGAGAGCGCCTTTCAAA 58.062 40.909 2.29 0.00 0.00 2.69
6150 6386 3.610040 TCAATAGAGAGCGCCTTTCAA 57.390 42.857 2.29 0.00 0.00 2.69
6151 6387 3.610040 TTCAATAGAGAGCGCCTTTCA 57.390 42.857 2.29 0.00 0.00 2.69
6152 6388 5.065218 TCAATTTCAATAGAGAGCGCCTTTC 59.935 40.000 2.29 0.00 0.00 2.62
6153 6389 4.943705 TCAATTTCAATAGAGAGCGCCTTT 59.056 37.500 2.29 0.00 0.00 3.11
6154 6390 4.517285 TCAATTTCAATAGAGAGCGCCTT 58.483 39.130 2.29 0.00 0.00 4.35
6155 6391 4.142609 TCAATTTCAATAGAGAGCGCCT 57.857 40.909 2.29 0.00 0.00 5.52
6156 6392 5.698545 ACTATCAATTTCAATAGAGAGCGCC 59.301 40.000 2.29 0.00 31.32 6.53
6157 6393 6.777526 ACTATCAATTTCAATAGAGAGCGC 57.222 37.500 0.00 0.00 31.32 5.92
6158 6394 8.066595 CCAAACTATCAATTTCAATAGAGAGCG 58.933 37.037 6.36 0.00 31.32 5.03
6159 6395 9.113838 TCCAAACTATCAATTTCAATAGAGAGC 57.886 33.333 6.36 0.00 31.32 4.09
6161 6397 9.618890 CCTCCAAACTATCAATTTCAATAGAGA 57.381 33.333 6.36 0.00 31.32 3.10
6162 6398 8.348507 GCCTCCAAACTATCAATTTCAATAGAG 58.651 37.037 6.36 0.00 31.32 2.43
6163 6399 8.055181 AGCCTCCAAACTATCAATTTCAATAGA 58.945 33.333 6.36 0.00 31.32 1.98
6164 6400 8.133627 CAGCCTCCAAACTATCAATTTCAATAG 58.866 37.037 0.00 0.00 0.00 1.73
6165 6401 7.615365 ACAGCCTCCAAACTATCAATTTCAATA 59.385 33.333 0.00 0.00 0.00 1.90
6166 6402 6.438425 ACAGCCTCCAAACTATCAATTTCAAT 59.562 34.615 0.00 0.00 0.00 2.57
6167 6403 5.774690 ACAGCCTCCAAACTATCAATTTCAA 59.225 36.000 0.00 0.00 0.00 2.69
6168 6404 5.324409 ACAGCCTCCAAACTATCAATTTCA 58.676 37.500 0.00 0.00 0.00 2.69
6169 6405 5.415701 TGACAGCCTCCAAACTATCAATTTC 59.584 40.000 0.00 0.00 0.00 2.17
6170 6406 5.324409 TGACAGCCTCCAAACTATCAATTT 58.676 37.500 0.00 0.00 0.00 1.82
6171 6407 4.922206 TGACAGCCTCCAAACTATCAATT 58.078 39.130 0.00 0.00 0.00 2.32
6172 6408 4.574674 TGACAGCCTCCAAACTATCAAT 57.425 40.909 0.00 0.00 0.00 2.57
6173 6409 4.072131 GTTGACAGCCTCCAAACTATCAA 58.928 43.478 0.00 0.00 0.00 2.57
6174 6410 3.072330 TGTTGACAGCCTCCAAACTATCA 59.928 43.478 0.00 0.00 0.00 2.15
6175 6411 3.674997 TGTTGACAGCCTCCAAACTATC 58.325 45.455 0.00 0.00 0.00 2.08
6176 6412 3.788227 TGTTGACAGCCTCCAAACTAT 57.212 42.857 0.00 0.00 0.00 2.12
6177 6413 3.411446 CATGTTGACAGCCTCCAAACTA 58.589 45.455 0.00 0.00 0.00 2.24
6178 6414 2.233271 CATGTTGACAGCCTCCAAACT 58.767 47.619 0.00 0.00 0.00 2.66
6179 6415 1.270550 CCATGTTGACAGCCTCCAAAC 59.729 52.381 0.00 0.00 0.00 2.93
6180 6416 1.133513 ACCATGTTGACAGCCTCCAAA 60.134 47.619 0.00 0.00 0.00 3.28
6181 6417 0.478072 ACCATGTTGACAGCCTCCAA 59.522 50.000 0.00 0.00 0.00 3.53
6182 6418 0.250858 CACCATGTTGACAGCCTCCA 60.251 55.000 0.00 0.00 0.00 3.86
6183 6419 0.036732 TCACCATGTTGACAGCCTCC 59.963 55.000 0.00 0.00 0.00 4.30
6184 6420 1.002430 TCTCACCATGTTGACAGCCTC 59.998 52.381 0.00 0.00 0.00 4.70
6185 6421 1.059098 TCTCACCATGTTGACAGCCT 58.941 50.000 0.00 0.00 0.00 4.58
6186 6422 1.896220 TTCTCACCATGTTGACAGCC 58.104 50.000 0.00 0.00 0.00 4.85
6187 6423 3.366679 CCATTTCTCACCATGTTGACAGC 60.367 47.826 0.00 0.00 0.00 4.40
6188 6424 4.074259 TCCATTTCTCACCATGTTGACAG 58.926 43.478 0.00 0.00 0.00 3.51
6189 6425 4.097551 TCCATTTCTCACCATGTTGACA 57.902 40.909 0.00 0.00 0.00 3.58
6190 6426 4.616835 GCTTCCATTTCTCACCATGTTGAC 60.617 45.833 0.00 0.00 0.00 3.18
6191 6427 3.507233 GCTTCCATTTCTCACCATGTTGA 59.493 43.478 0.00 0.00 0.00 3.18
6192 6428 3.256383 TGCTTCCATTTCTCACCATGTTG 59.744 43.478 0.00 0.00 0.00 3.33
6193 6429 3.256631 GTGCTTCCATTTCTCACCATGTT 59.743 43.478 0.00 0.00 0.00 2.71
6194 6430 2.821969 GTGCTTCCATTTCTCACCATGT 59.178 45.455 0.00 0.00 0.00 3.21
6195 6431 2.821378 TGTGCTTCCATTTCTCACCATG 59.179 45.455 0.00 0.00 0.00 3.66
6196 6432 3.159213 TGTGCTTCCATTTCTCACCAT 57.841 42.857 0.00 0.00 0.00 3.55
6197 6433 2.655090 TGTGCTTCCATTTCTCACCA 57.345 45.000 0.00 0.00 0.00 4.17
6198 6434 3.068024 TGTTTGTGCTTCCATTTCTCACC 59.932 43.478 0.00 0.00 0.00 4.02
6199 6435 4.036734 TCTGTTTGTGCTTCCATTTCTCAC 59.963 41.667 0.00 0.00 0.00 3.51
6200 6436 4.206375 TCTGTTTGTGCTTCCATTTCTCA 58.794 39.130 0.00 0.00 0.00 3.27
6201 6437 4.836125 TCTGTTTGTGCTTCCATTTCTC 57.164 40.909 0.00 0.00 0.00 2.87
6202 6438 4.828939 TGATCTGTTTGTGCTTCCATTTCT 59.171 37.500 0.00 0.00 0.00 2.52
6203 6439 5.125100 TGATCTGTTTGTGCTTCCATTTC 57.875 39.130 0.00 0.00 0.00 2.17
6204 6440 5.534207 TTGATCTGTTTGTGCTTCCATTT 57.466 34.783 0.00 0.00 0.00 2.32
6205 6441 5.069516 ACTTTGATCTGTTTGTGCTTCCATT 59.930 36.000 0.00 0.00 0.00 3.16
6206 6442 4.586001 ACTTTGATCTGTTTGTGCTTCCAT 59.414 37.500 0.00 0.00 0.00 3.41
6207 6443 3.953612 ACTTTGATCTGTTTGTGCTTCCA 59.046 39.130 0.00 0.00 0.00 3.53
6208 6444 4.574599 ACTTTGATCTGTTTGTGCTTCC 57.425 40.909 0.00 0.00 0.00 3.46
6209 6445 5.570589 GCATACTTTGATCTGTTTGTGCTTC 59.429 40.000 0.00 0.00 0.00 3.86
6210 6446 5.242393 AGCATACTTTGATCTGTTTGTGCTT 59.758 36.000 0.00 0.00 35.89 3.91
6211 6447 4.763793 AGCATACTTTGATCTGTTTGTGCT 59.236 37.500 0.00 1.01 34.68 4.40
6212 6448 5.051891 AGCATACTTTGATCTGTTTGTGC 57.948 39.130 0.00 0.00 0.00 4.57
6213 6449 7.864379 AGAAAAGCATACTTTGATCTGTTTGTG 59.136 33.333 0.00 0.00 45.48 3.33
6214 6450 7.945134 AGAAAAGCATACTTTGATCTGTTTGT 58.055 30.769 0.00 0.00 45.48 2.83
6215 6451 8.077991 TGAGAAAAGCATACTTTGATCTGTTTG 58.922 33.333 0.00 0.00 45.48 2.93
6216 6452 8.169977 TGAGAAAAGCATACTTTGATCTGTTT 57.830 30.769 0.00 0.00 45.48 2.83
6217 6453 7.750229 TGAGAAAAGCATACTTTGATCTGTT 57.250 32.000 0.00 0.00 45.48 3.16
6218 6454 7.934855 ATGAGAAAAGCATACTTTGATCTGT 57.065 32.000 0.00 0.00 45.48 3.41
6219 6455 9.932699 CTTATGAGAAAAGCATACTTTGATCTG 57.067 33.333 0.00 0.00 45.48 2.90
6220 6456 9.896645 TCTTATGAGAAAAGCATACTTTGATCT 57.103 29.630 0.00 0.00 45.48 2.75
6222 6458 9.896645 TCTCTTATGAGAAAAGCATACTTTGAT 57.103 29.630 5.88 0.00 45.42 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.