Multiple sequence alignment - TraesCS5D01G192800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G192800 chr5D 100.000 2462 0 0 1 2462 296964133 296966594 0.000000e+00 4547.0
1 TraesCS5D01G192800 chr5D 91.463 902 65 4 2 900 479634097 479634989 0.000000e+00 1229.0
2 TraesCS5D01G192800 chr5D 91.324 876 63 6 1 870 10681418 10680550 0.000000e+00 1184.0
3 TraesCS5D01G192800 chr5D 93.488 645 27 9 935 1573 501450074 501449439 0.000000e+00 944.0
4 TraesCS5D01G192800 chr5D 91.925 644 29 12 947 1574 495142484 495143120 0.000000e+00 880.0
5 TraesCS5D01G192800 chr5D 94.158 582 23 9 997 1573 495199977 495200552 0.000000e+00 876.0
6 TraesCS5D01G192800 chr5D 92.517 588 35 8 989 1573 517213457 517214038 0.000000e+00 833.0
7 TraesCS5D01G192800 chr5D 97.133 279 7 1 1895 2173 29153857 29154134 1.030000e-128 470.0
8 TraesCS5D01G192800 chr5D 89.583 192 11 2 1570 1752 501449408 501449217 4.090000e-58 235.0
9 TraesCS5D01G192800 chr5D 83.444 151 18 2 1591 1734 509023785 509023635 1.540000e-27 134.0
10 TraesCS5D01G192800 chr5D 90.000 80 8 0 1739 1818 517214144 517214223 1.200000e-18 104.0
11 TraesCS5D01G192800 chr5D 100.000 36 0 0 2195 2230 357401539 357401504 1.580000e-07 67.6
12 TraesCS5D01G192800 chr3B 91.934 905 61 7 1 905 602244115 602245007 0.000000e+00 1256.0
13 TraesCS5D01G192800 chr2D 91.189 908 66 9 1 901 508733768 508732868 0.000000e+00 1221.0
14 TraesCS5D01G192800 chr2D 91.040 904 73 5 1 901 646026407 646025509 0.000000e+00 1214.0
15 TraesCS5D01G192800 chr2D 90.779 911 72 4 1 905 595230475 595229571 0.000000e+00 1206.0
16 TraesCS5D01G192800 chr2D 89.753 283 29 0 1893 2175 59659631 59659349 1.800000e-96 363.0
17 TraesCS5D01G192800 chr7D 90.440 910 76 6 1 905 521898592 521899495 0.000000e+00 1188.0
18 TraesCS5D01G192800 chr7D 89.879 909 83 6 1 905 220209926 220210829 0.000000e+00 1160.0
19 TraesCS5D01G192800 chr7D 96.269 268 8 1 1897 2164 32674157 32673892 2.910000e-119 438.0
20 TraesCS5D01G192800 chr5A 90.198 908 76 9 1 901 211614060 211614961 0.000000e+00 1171.0
21 TraesCS5D01G192800 chr5A 94.248 678 25 9 900 1570 625715343 625716013 0.000000e+00 1024.0
22 TraesCS5D01G192800 chr5A 92.007 588 39 7 989 1573 644310451 644311033 0.000000e+00 819.0
23 TraesCS5D01G192800 chr5A 85.926 270 12 11 1639 1891 625716128 625716388 5.220000e-67 265.0
24 TraesCS5D01G192800 chr5A 81.200 250 25 9 1565 1792 644311059 644311308 5.410000e-42 182.0
25 TraesCS5D01G192800 chr5B 88.649 925 44 27 935 1818 629926357 629925453 0.000000e+00 1070.0
26 TraesCS5D01G192800 chr5B 93.501 677 32 7 900 1573 633171350 633172017 0.000000e+00 996.0
27 TraesCS5D01G192800 chr5B 93.694 666 26 9 914 1573 628724436 628723781 0.000000e+00 983.0
28 TraesCS5D01G192800 chr5B 95.683 278 12 0 1894 2171 592737959 592738236 4.830000e-122 448.0
29 TraesCS5D01G192800 chr5B 90.578 329 20 4 1570 1897 633172048 633172366 2.260000e-115 425.0
30 TraesCS5D01G192800 chr5B 90.769 260 11 6 1570 1818 625130744 625130487 3.920000e-88 335.0
31 TraesCS5D01G192800 chr5B 90.769 260 11 6 1570 1818 628723750 628723493 3.920000e-88 335.0
32 TraesCS5D01G192800 chr5B 83.088 272 30 10 2196 2462 532183535 532183795 1.470000e-57 233.0
33 TraesCS5D01G192800 chr5B 79.360 344 30 19 1570 1878 649499165 649499502 1.150000e-48 204.0
34 TraesCS5D01G192800 chr5B 84.940 166 22 2 1572 1734 639670409 639670244 5.450000e-37 165.0
35 TraesCS5D01G192800 chr5B 77.580 281 35 11 1565 1818 649695057 649695336 7.100000e-31 145.0
36 TraesCS5D01G192800 chr5B 73.761 343 49 28 1570 1891 629952528 629952206 2.020000e-16 97.1
37 TraesCS5D01G192800 chr5B 84.211 76 5 5 1824 1898 629925419 629925350 1.580000e-07 67.6
38 TraesCS5D01G192800 chr5B 100.000 32 0 0 2171 2202 633172364 633172395 2.640000e-05 60.2
39 TraesCS5D01G192800 chr3D 97.491 279 7 0 1895 2173 388809884 388809606 6.160000e-131 477.0
40 TraesCS5D01G192800 chr3D 89.236 288 31 0 1887 2174 283613107 283613394 6.470000e-96 361.0
41 TraesCS5D01G192800 chr3D 83.032 277 34 9 2197 2462 162386997 162386723 3.160000e-59 239.0
42 TraesCS5D01G192800 chr1D 90.323 279 27 0 1895 2173 203866202 203866480 1.390000e-97 366.0
43 TraesCS5D01G192800 chr6D 89.964 279 28 0 1895 2173 350262249 350261971 6.470000e-96 361.0
44 TraesCS5D01G192800 chr6A 89.964 279 28 0 1895 2173 47959370 47959092 6.470000e-96 361.0
45 TraesCS5D01G192800 chr7A 93.836 146 8 1 2211 2356 132913359 132913503 4.120000e-53 219.0
46 TraesCS5D01G192800 chr1A 91.579 95 7 1 2197 2290 710284 710190 1.990000e-26 130.0
47 TraesCS5D01G192800 chr1A 97.368 38 1 0 2193 2230 417341893 417341930 5.680000e-07 65.8
48 TraesCS5D01G192800 chr1A 100.000 29 0 0 2197 2225 27197969 27197941 1.000000e-03 54.7
49 TraesCS5D01G192800 chr4A 100.000 30 0 0 2197 2226 361004552 361004523 3.420000e-04 56.5
50 TraesCS5D01G192800 chr3A 96.875 32 1 0 2194 2225 289016615 289016646 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G192800 chr5D 296964133 296966594 2461 False 4547.000000 4547 100.0000 1 2462 1 chr5D.!!$F2 2461
1 TraesCS5D01G192800 chr5D 479634097 479634989 892 False 1229.000000 1229 91.4630 2 900 1 chr5D.!!$F3 898
2 TraesCS5D01G192800 chr5D 10680550 10681418 868 True 1184.000000 1184 91.3240 1 870 1 chr5D.!!$R1 869
3 TraesCS5D01G192800 chr5D 495142484 495143120 636 False 880.000000 880 91.9250 947 1574 1 chr5D.!!$F4 627
4 TraesCS5D01G192800 chr5D 495199977 495200552 575 False 876.000000 876 94.1580 997 1573 1 chr5D.!!$F5 576
5 TraesCS5D01G192800 chr5D 501449217 501450074 857 True 589.500000 944 91.5355 935 1752 2 chr5D.!!$R4 817
6 TraesCS5D01G192800 chr5D 517213457 517214223 766 False 468.500000 833 91.2585 989 1818 2 chr5D.!!$F6 829
7 TraesCS5D01G192800 chr3B 602244115 602245007 892 False 1256.000000 1256 91.9340 1 905 1 chr3B.!!$F1 904
8 TraesCS5D01G192800 chr2D 508732868 508733768 900 True 1221.000000 1221 91.1890 1 901 1 chr2D.!!$R2 900
9 TraesCS5D01G192800 chr2D 646025509 646026407 898 True 1214.000000 1214 91.0400 1 901 1 chr2D.!!$R4 900
10 TraesCS5D01G192800 chr2D 595229571 595230475 904 True 1206.000000 1206 90.7790 1 905 1 chr2D.!!$R3 904
11 TraesCS5D01G192800 chr7D 521898592 521899495 903 False 1188.000000 1188 90.4400 1 905 1 chr7D.!!$F2 904
12 TraesCS5D01G192800 chr7D 220209926 220210829 903 False 1160.000000 1160 89.8790 1 905 1 chr7D.!!$F1 904
13 TraesCS5D01G192800 chr5A 211614060 211614961 901 False 1171.000000 1171 90.1980 1 901 1 chr5A.!!$F1 900
14 TraesCS5D01G192800 chr5A 625715343 625716388 1045 False 644.500000 1024 90.0870 900 1891 2 chr5A.!!$F2 991
15 TraesCS5D01G192800 chr5A 644310451 644311308 857 False 500.500000 819 86.6035 989 1792 2 chr5A.!!$F3 803
16 TraesCS5D01G192800 chr5B 628723493 628724436 943 True 659.000000 983 92.2315 914 1818 2 chr5B.!!$R4 904
17 TraesCS5D01G192800 chr5B 629925350 629926357 1007 True 568.800000 1070 86.4300 935 1898 2 chr5B.!!$R5 963
18 TraesCS5D01G192800 chr5B 633171350 633172395 1045 False 493.733333 996 94.6930 900 2202 3 chr5B.!!$F5 1302

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
780 813 0.61326 CTTGGACCGGAGATGGTTCA 59.387 55.0 9.46 0.0 46.03 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2363 2597 0.036765 GCAACATGGGTACGAGTGGA 60.037 55.0 0.0 0.0 0.0 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 9.750125 AAATTGCGCTCTATCAATATATCGATA 57.250 29.630 9.73 7.75 33.05 2.92
129 131 3.251004 AGAGCACAAACCGAAGCTAAAAG 59.749 43.478 0.00 0.00 37.48 2.27
217 219 1.785951 GGCGCACGACCTTCTTTAC 59.214 57.895 10.83 0.00 0.00 2.01
223 225 1.719780 CACGACCTTCTTTACGCAGTC 59.280 52.381 0.00 0.00 43.93 3.51
312 314 1.399744 ATTCCTGTATCTGCCGGCGA 61.400 55.000 23.90 21.83 0.00 5.54
344 346 1.236628 GTAGATCCGAGCGGCTAGAA 58.763 55.000 11.90 0.00 34.68 2.10
396 398 3.329889 TGCCATGGTCTTCCGGCT 61.330 61.111 14.67 0.00 39.77 5.52
516 518 2.670592 GTGGCCGTGGTTGGGTAC 60.671 66.667 0.00 0.00 0.00 3.34
608 641 4.388499 GCGGCGGTGAGGGAAGAA 62.388 66.667 9.78 0.00 0.00 2.52
618 651 3.457749 GGTGAGGGAAGAATGGAGAAGAT 59.542 47.826 0.00 0.00 0.00 2.40
652 685 4.040198 GGAGGGAGGGAGGGGGTT 62.040 72.222 0.00 0.00 0.00 4.11
676 709 2.123468 AAAAAGGCGCCCCTGTGT 60.123 55.556 26.15 0.00 41.90 3.72
771 804 2.975799 GCGCAAACTTGGACCGGA 60.976 61.111 9.46 0.00 0.00 5.14
780 813 0.613260 CTTGGACCGGAGATGGTTCA 59.387 55.000 9.46 0.00 46.03 3.18
785 818 2.552373 GGACCGGAGATGGTTCAAAAGT 60.552 50.000 9.46 0.00 44.01 2.66
800 833 5.054390 TCAAAAGTGGACACAAAACAGAC 57.946 39.130 5.14 0.00 0.00 3.51
812 845 4.557301 CACAAAACAGACAAAAGTCCGTTC 59.443 41.667 0.00 0.00 0.00 3.95
850 883 1.453148 CGTCTGGTTCGTCCGTTTTAC 59.547 52.381 0.00 0.00 39.52 2.01
854 887 1.150827 GGTTCGTCCGTTTTACCCTG 58.849 55.000 0.00 0.00 0.00 4.45
858 891 1.411977 TCGTCCGTTTTACCCTGAACA 59.588 47.619 0.00 0.00 0.00 3.18
861 894 2.804527 GTCCGTTTTACCCTGAACAGAC 59.195 50.000 3.19 0.00 0.00 3.51
865 898 0.947180 TTTACCCTGAACAGACGCGC 60.947 55.000 5.73 0.00 0.00 6.86
881 914 4.796231 GCGCGGACACGATGAGGT 62.796 66.667 8.83 0.00 44.60 3.85
882 915 2.579787 CGCGGACACGATGAGGTC 60.580 66.667 0.00 0.00 44.60 3.85
940 974 1.372087 CCAAATCTCTCCGCACCAGC 61.372 60.000 0.00 0.00 37.42 4.85
969 1003 1.032114 CGCCTTCTCAAATCCCCCAC 61.032 60.000 0.00 0.00 0.00 4.61
995 1043 4.684485 CGCCAAATCTCAAATCCCTCTAGT 60.684 45.833 0.00 0.00 0.00 2.57
1516 1633 3.311596 AGTGTTCGCTGTTTAAGTTGTCC 59.688 43.478 0.00 0.00 0.00 4.02
1520 1637 2.811431 TCGCTGTTTAAGTTGTCCATGG 59.189 45.455 4.97 4.97 0.00 3.66
1533 1650 7.914427 AGTTGTCCATGGAGTATATGTTCTA 57.086 36.000 16.81 0.00 0.00 2.10
1534 1651 8.497910 AGTTGTCCATGGAGTATATGTTCTAT 57.502 34.615 16.81 0.00 0.00 1.98
1535 1652 8.589338 AGTTGTCCATGGAGTATATGTTCTATC 58.411 37.037 16.81 0.00 0.00 2.08
1578 1736 7.846644 AATGTCAGAAATCTCTCTGTTCATC 57.153 36.000 0.86 0.00 42.93 2.92
1634 1799 2.369203 TGGGACGAATGGTTGTGTCTAA 59.631 45.455 0.00 0.00 0.00 2.10
1764 1963 6.428159 AGTTCAGGTTCAGACATTTGTGTATC 59.572 38.462 0.00 0.00 0.00 2.24
1799 2002 2.264005 TGCCAACGTTTCACCTGTAT 57.736 45.000 0.00 0.00 0.00 2.29
1827 2060 0.737715 GCTGCTGTAGTCACGGAAGG 60.738 60.000 0.00 0.00 37.20 3.46
1892 2126 5.880332 ACCGCATTCTAAAACATGATGTAGT 59.120 36.000 0.00 0.00 0.00 2.73
1894 2128 7.715249 ACCGCATTCTAAAACATGATGTAGTAT 59.285 33.333 0.00 0.00 0.00 2.12
1895 2129 9.203421 CCGCATTCTAAAACATGATGTAGTATA 57.797 33.333 0.00 0.00 0.00 1.47
1926 2160 5.560724 CCATAATGGGAGTAACATAGGTGG 58.439 45.833 0.00 0.00 32.67 4.61
1927 2161 5.073144 CCATAATGGGAGTAACATAGGTGGT 59.927 44.000 0.00 0.00 32.67 4.16
1928 2162 6.271391 CCATAATGGGAGTAACATAGGTGGTA 59.729 42.308 0.00 0.00 32.67 3.25
1929 2163 7.202149 CCATAATGGGAGTAACATAGGTGGTAA 60.202 40.741 0.00 0.00 32.67 2.85
1930 2164 5.625568 ATGGGAGTAACATAGGTGGTAAC 57.374 43.478 0.00 0.00 0.00 2.50
1947 2181 4.344102 TGGTAACATCACACCTATCTAGGC 59.656 45.833 3.08 0.00 45.29 3.93
1948 2182 6.106344 TGGTAACATCACACCTATCTAGGCA 61.106 44.000 3.08 0.00 45.29 4.75
1949 2183 7.543211 TGGTAACATCACACCTATCTAGGCAA 61.543 42.308 3.08 0.00 45.29 4.52
1950 2184 8.947389 TGGTAACATCACACCTATCTAGGCAAA 61.947 40.741 3.08 0.00 45.29 3.68
1962 2196 8.489990 CCTATCTAGGCAAAATAGATGATGTG 57.510 38.462 5.87 0.00 39.68 3.21
1963 2197 7.551974 CCTATCTAGGCAAAATAGATGATGTGG 59.448 40.741 5.87 0.00 39.68 4.17
1964 2198 5.065914 TCTAGGCAAAATAGATGATGTGGC 58.934 41.667 0.00 0.00 32.08 5.01
1965 2199 3.634504 AGGCAAAATAGATGATGTGGCA 58.365 40.909 0.00 0.00 33.54 4.92
1966 2200 4.220724 AGGCAAAATAGATGATGTGGCAT 58.779 39.130 0.00 0.00 33.54 4.40
1967 2201 4.038763 AGGCAAAATAGATGATGTGGCATG 59.961 41.667 0.00 0.00 33.54 4.06
1968 2202 4.202182 GGCAAAATAGATGATGTGGCATGT 60.202 41.667 0.00 0.00 32.18 3.21
1969 2203 5.009911 GGCAAAATAGATGATGTGGCATGTA 59.990 40.000 0.00 0.00 32.18 2.29
1970 2204 6.461370 GGCAAAATAGATGATGTGGCATGTAA 60.461 38.462 0.00 0.00 32.18 2.41
1971 2205 7.149973 GCAAAATAGATGATGTGGCATGTAAT 58.850 34.615 0.00 0.00 29.35 1.89
1972 2206 7.654520 GCAAAATAGATGATGTGGCATGTAATT 59.345 33.333 0.00 0.00 29.35 1.40
1977 2211 9.743581 ATAGATGATGTGGCATGTAATTAATGA 57.256 29.630 0.00 0.00 29.35 2.57
1978 2212 8.467963 AGATGATGTGGCATGTAATTAATGAA 57.532 30.769 0.00 0.00 0.00 2.57
1979 2213 8.573885 AGATGATGTGGCATGTAATTAATGAAG 58.426 33.333 0.00 0.00 0.00 3.02
1980 2214 7.878547 TGATGTGGCATGTAATTAATGAAGA 57.121 32.000 0.00 0.00 0.00 2.87
1981 2215 8.291191 TGATGTGGCATGTAATTAATGAAGAA 57.709 30.769 0.00 0.00 0.00 2.52
1982 2216 8.747471 TGATGTGGCATGTAATTAATGAAGAAA 58.253 29.630 0.00 0.00 0.00 2.52
1983 2217 9.241317 GATGTGGCATGTAATTAATGAAGAAAG 57.759 33.333 0.00 0.00 0.00 2.62
1984 2218 8.347004 TGTGGCATGTAATTAATGAAGAAAGA 57.653 30.769 0.00 0.00 0.00 2.52
1985 2219 8.461222 TGTGGCATGTAATTAATGAAGAAAGAG 58.539 33.333 0.00 0.00 0.00 2.85
1986 2220 8.677300 GTGGCATGTAATTAATGAAGAAAGAGA 58.323 33.333 0.00 0.00 0.00 3.10
1987 2221 8.896744 TGGCATGTAATTAATGAAGAAAGAGAG 58.103 33.333 10.14 0.00 0.00 3.20
1988 2222 9.113838 GGCATGTAATTAATGAAGAAAGAGAGA 57.886 33.333 10.14 0.00 0.00 3.10
1989 2223 9.928236 GCATGTAATTAATGAAGAAAGAGAGAC 57.072 33.333 10.14 0.00 0.00 3.36
1995 2229 9.730705 AATTAATGAAGAAAGAGAGACATGTGA 57.269 29.630 1.15 0.00 0.00 3.58
1996 2230 9.902684 ATTAATGAAGAAAGAGAGACATGTGAT 57.097 29.630 1.15 0.00 0.00 3.06
1999 2233 8.715191 ATGAAGAAAGAGAGACATGTGATAAC 57.285 34.615 1.15 0.00 0.00 1.89
2000 2234 7.670364 TGAAGAAAGAGAGACATGTGATAACA 58.330 34.615 1.15 0.00 0.00 2.41
2001 2235 8.316946 TGAAGAAAGAGAGACATGTGATAACAT 58.683 33.333 1.15 0.00 0.00 2.71
2002 2236 9.809096 GAAGAAAGAGAGACATGTGATAACATA 57.191 33.333 1.15 0.00 0.00 2.29
2003 2237 9.814899 AAGAAAGAGAGACATGTGATAACATAG 57.185 33.333 1.15 0.00 0.00 2.23
2004 2238 7.925483 AGAAAGAGAGACATGTGATAACATAGC 59.075 37.037 1.15 0.00 0.00 2.97
2005 2239 6.975196 AGAGAGACATGTGATAACATAGCT 57.025 37.500 1.15 0.00 0.00 3.32
2006 2240 8.470657 AAGAGAGACATGTGATAACATAGCTA 57.529 34.615 1.15 0.00 0.00 3.32
2007 2241 8.470657 AGAGAGACATGTGATAACATAGCTAA 57.529 34.615 1.15 0.00 0.00 3.09
2008 2242 9.087871 AGAGAGACATGTGATAACATAGCTAAT 57.912 33.333 1.15 0.00 0.00 1.73
2009 2243 9.703892 GAGAGACATGTGATAACATAGCTAATT 57.296 33.333 1.15 0.00 0.00 1.40
2017 2251 9.529325 TGTGATAACATAGCTAATTACTGTCAC 57.471 33.333 16.97 16.97 0.00 3.67
2018 2252 9.529325 GTGATAACATAGCTAATTACTGTCACA 57.471 33.333 17.92 9.29 0.00 3.58
2022 2256 8.425577 AACATAGCTAATTACTGTCACATCAC 57.574 34.615 0.00 0.00 0.00 3.06
2023 2257 7.555965 ACATAGCTAATTACTGTCACATCACA 58.444 34.615 0.00 0.00 0.00 3.58
2024 2258 7.492669 ACATAGCTAATTACTGTCACATCACAC 59.507 37.037 0.00 0.00 0.00 3.82
2025 2259 5.793817 AGCTAATTACTGTCACATCACACA 58.206 37.500 0.00 0.00 0.00 3.72
2026 2260 6.409704 AGCTAATTACTGTCACATCACACAT 58.590 36.000 0.00 0.00 0.00 3.21
2027 2261 7.555965 AGCTAATTACTGTCACATCACACATA 58.444 34.615 0.00 0.00 0.00 2.29
2028 2262 8.206867 AGCTAATTACTGTCACATCACACATAT 58.793 33.333 0.00 0.00 0.00 1.78
2029 2263 8.491152 GCTAATTACTGTCACATCACACATATC 58.509 37.037 0.00 0.00 0.00 1.63
2030 2264 9.533253 CTAATTACTGTCACATCACACATATCA 57.467 33.333 0.00 0.00 0.00 2.15
2031 2265 8.791327 AATTACTGTCACATCACACATATCAA 57.209 30.769 0.00 0.00 0.00 2.57
2032 2266 7.832503 TTACTGTCACATCACACATATCAAG 57.167 36.000 0.00 0.00 0.00 3.02
2033 2267 5.181009 ACTGTCACATCACACATATCAAGG 58.819 41.667 0.00 0.00 0.00 3.61
2034 2268 3.940852 TGTCACATCACACATATCAAGGC 59.059 43.478 0.00 0.00 0.00 4.35
2035 2269 3.940852 GTCACATCACACATATCAAGGCA 59.059 43.478 0.00 0.00 0.00 4.75
2036 2270 4.395854 GTCACATCACACATATCAAGGCAA 59.604 41.667 0.00 0.00 0.00 4.52
2037 2271 4.637091 TCACATCACACATATCAAGGCAAG 59.363 41.667 0.00 0.00 0.00 4.01
2038 2272 4.637091 CACATCACACATATCAAGGCAAGA 59.363 41.667 0.00 0.00 0.00 3.02
2039 2273 5.298527 CACATCACACATATCAAGGCAAGAT 59.701 40.000 0.00 0.00 0.00 2.40
2040 2274 5.298527 ACATCACACATATCAAGGCAAGATG 59.701 40.000 0.00 0.00 36.24 2.90
2041 2275 4.847198 TCACACATATCAAGGCAAGATGT 58.153 39.130 2.43 0.00 0.00 3.06
2044 2278 5.165911 CACATATCAAGGCAAGATGTGTC 57.834 43.478 15.13 0.00 43.18 3.67
2046 2280 6.051074 CACATATCAAGGCAAGATGTGTCTA 58.949 40.000 15.13 0.00 43.11 2.59
2047 2281 6.709397 CACATATCAAGGCAAGATGTGTCTAT 59.291 38.462 15.13 0.00 43.11 1.98
2048 2282 7.874528 CACATATCAAGGCAAGATGTGTCTATA 59.125 37.037 15.13 0.00 43.11 1.31
2049 2283 8.093307 ACATATCAAGGCAAGATGTGTCTATAG 58.907 37.037 13.16 0.00 43.11 1.31
2050 2284 4.697514 TCAAGGCAAGATGTGTCTATAGC 58.302 43.478 0.00 0.00 43.11 2.97
2051 2285 3.760580 AGGCAAGATGTGTCTATAGCC 57.239 47.619 0.00 0.00 41.69 3.93
2052 2286 3.312890 AGGCAAGATGTGTCTATAGCCT 58.687 45.455 11.05 11.05 41.69 4.58
2053 2287 4.483950 AGGCAAGATGTGTCTATAGCCTA 58.516 43.478 13.74 0.00 46.63 3.93
2054 2288 4.901849 AGGCAAGATGTGTCTATAGCCTAA 59.098 41.667 13.74 0.00 46.63 2.69
2055 2289 5.545723 AGGCAAGATGTGTCTATAGCCTAAT 59.454 40.000 13.74 0.00 46.63 1.73
2056 2290 6.726299 AGGCAAGATGTGTCTATAGCCTAATA 59.274 38.462 13.74 0.00 46.63 0.98
2057 2291 7.235606 AGGCAAGATGTGTCTATAGCCTAATAA 59.764 37.037 13.74 0.00 46.63 1.40
2058 2292 7.878127 GGCAAGATGTGTCTATAGCCTAATAAA 59.122 37.037 0.00 0.00 40.78 1.40
2059 2293 9.442047 GCAAGATGTGTCTATAGCCTAATAAAT 57.558 33.333 0.00 0.00 33.30 1.40
2065 2299 9.764363 TGTGTCTATAGCCTAATAAATGAAGTG 57.236 33.333 0.00 0.00 0.00 3.16
2066 2300 9.765795 GTGTCTATAGCCTAATAAATGAAGTGT 57.234 33.333 0.00 0.00 0.00 3.55
2069 2303 9.273016 TCTATAGCCTAATAAATGAAGTGTTGC 57.727 33.333 0.00 0.00 0.00 4.17
2070 2304 7.880160 ATAGCCTAATAAATGAAGTGTTGCA 57.120 32.000 0.00 0.00 0.00 4.08
2071 2305 6.780457 AGCCTAATAAATGAAGTGTTGCAT 57.220 33.333 0.00 0.00 0.00 3.96
2072 2306 6.567050 AGCCTAATAAATGAAGTGTTGCATG 58.433 36.000 0.00 0.00 0.00 4.06
2073 2307 6.153340 AGCCTAATAAATGAAGTGTTGCATGT 59.847 34.615 0.00 0.00 0.00 3.21
2074 2308 6.813152 GCCTAATAAATGAAGTGTTGCATGTT 59.187 34.615 0.00 0.00 0.00 2.71
2075 2309 7.973388 GCCTAATAAATGAAGTGTTGCATGTTA 59.027 33.333 0.00 0.00 0.00 2.41
2076 2310 9.289303 CCTAATAAATGAAGTGTTGCATGTTAC 57.711 33.333 0.00 0.00 0.00 2.50
2077 2311 9.289303 CTAATAAATGAAGTGTTGCATGTTACC 57.711 33.333 0.00 0.00 0.00 2.85
2078 2312 5.528043 AAATGAAGTGTTGCATGTTACCA 57.472 34.783 0.00 0.00 0.00 3.25
2079 2313 3.980646 TGAAGTGTTGCATGTTACCAC 57.019 42.857 0.00 0.00 0.00 4.16
2080 2314 3.282885 TGAAGTGTTGCATGTTACCACA 58.717 40.909 0.00 0.00 37.31 4.17
2081 2315 3.888323 TGAAGTGTTGCATGTTACCACAT 59.112 39.130 0.00 0.00 45.18 3.21
2082 2316 5.066593 TGAAGTGTTGCATGTTACCACATA 58.933 37.500 0.00 0.00 42.14 2.29
2083 2317 5.709631 TGAAGTGTTGCATGTTACCACATAT 59.290 36.000 0.00 0.00 42.14 1.78
2084 2318 6.881602 TGAAGTGTTGCATGTTACCACATATA 59.118 34.615 0.00 0.00 42.14 0.86
2085 2319 7.555914 TGAAGTGTTGCATGTTACCACATATAT 59.444 33.333 0.00 0.00 42.14 0.86
2086 2320 7.263100 AGTGTTGCATGTTACCACATATATG 57.737 36.000 11.29 11.29 42.14 1.78
2087 2321 6.828273 AGTGTTGCATGTTACCACATATATGT 59.172 34.615 12.75 12.75 42.14 2.29
2088 2322 7.339212 AGTGTTGCATGTTACCACATATATGTT 59.661 33.333 15.85 5.50 42.14 2.71
2089 2323 8.616942 GTGTTGCATGTTACCACATATATGTTA 58.383 33.333 15.85 4.50 42.14 2.41
2090 2324 8.616942 TGTTGCATGTTACCACATATATGTTAC 58.383 33.333 15.85 11.59 42.14 2.50
2091 2325 8.836413 GTTGCATGTTACCACATATATGTTACT 58.164 33.333 15.85 4.09 42.14 2.24
2092 2326 8.601845 TGCATGTTACCACATATATGTTACTC 57.398 34.615 15.85 6.72 42.14 2.59
2093 2327 7.659799 TGCATGTTACCACATATATGTTACTCC 59.340 37.037 15.85 5.35 42.14 3.85
2094 2328 7.119262 GCATGTTACCACATATATGTTACTCCC 59.881 40.741 15.85 3.90 42.14 4.30
2095 2329 7.069877 TGTTACCACATATATGTTACTCCCC 57.930 40.000 15.85 2.44 39.39 4.81
2096 2330 6.616137 TGTTACCACATATATGTTACTCCCCA 59.384 38.462 15.85 4.81 39.39 4.96
2097 2331 5.562298 ACCACATATATGTTACTCCCCAC 57.438 43.478 15.85 0.00 39.39 4.61
2098 2332 5.224441 ACCACATATATGTTACTCCCCACT 58.776 41.667 15.85 0.00 39.39 4.00
2099 2333 5.071788 ACCACATATATGTTACTCCCCACTG 59.928 44.000 15.85 0.63 39.39 3.66
2100 2334 5.071788 CCACATATATGTTACTCCCCACTGT 59.928 44.000 15.85 0.00 39.39 3.55
2101 2335 6.269077 CCACATATATGTTACTCCCCACTGTA 59.731 42.308 15.85 0.00 39.39 2.74
2102 2336 7.378966 CACATATATGTTACTCCCCACTGTAG 58.621 42.308 15.85 0.00 39.39 2.74
2103 2337 7.232737 CACATATATGTTACTCCCCACTGTAGA 59.767 40.741 15.85 0.00 39.39 2.59
2104 2338 7.451877 ACATATATGTTACTCCCCACTGTAGAG 59.548 40.741 12.75 1.43 37.90 2.43
2105 2339 2.816411 TGTTACTCCCCACTGTAGAGG 58.184 52.381 6.62 0.00 31.70 3.69
2106 2340 2.111255 TGTTACTCCCCACTGTAGAGGT 59.889 50.000 6.62 0.00 31.70 3.85
2107 2341 3.334581 TGTTACTCCCCACTGTAGAGGTA 59.665 47.826 6.62 0.00 31.70 3.08
2108 2342 2.830651 ACTCCCCACTGTAGAGGTAG 57.169 55.000 6.62 0.00 31.70 3.18
2109 2343 2.001558 ACTCCCCACTGTAGAGGTAGT 58.998 52.381 6.62 0.00 31.70 2.73
2110 2344 3.196300 ACTCCCCACTGTAGAGGTAGTA 58.804 50.000 6.62 0.00 31.70 1.82
2111 2345 3.595138 ACTCCCCACTGTAGAGGTAGTAA 59.405 47.826 6.62 0.00 31.70 2.24
2112 2346 3.952967 CTCCCCACTGTAGAGGTAGTAAC 59.047 52.174 0.00 0.00 0.00 2.50
2113 2347 3.334581 TCCCCACTGTAGAGGTAGTAACA 59.665 47.826 0.00 0.00 0.00 2.41
2114 2348 4.016851 TCCCCACTGTAGAGGTAGTAACAT 60.017 45.833 0.00 0.00 0.00 2.71
2115 2349 5.194334 TCCCCACTGTAGAGGTAGTAACATA 59.806 44.000 0.00 0.00 0.00 2.29
2116 2350 5.535406 CCCCACTGTAGAGGTAGTAACATAG 59.465 48.000 0.00 0.00 0.00 2.23
2117 2351 6.363065 CCCACTGTAGAGGTAGTAACATAGA 58.637 44.000 0.00 0.00 0.00 1.98
2118 2352 6.262720 CCCACTGTAGAGGTAGTAACATAGAC 59.737 46.154 0.00 0.00 0.00 2.59
2119 2353 7.055378 CCACTGTAGAGGTAGTAACATAGACT 58.945 42.308 0.00 0.00 0.00 3.24
2120 2354 8.209584 CCACTGTAGAGGTAGTAACATAGACTA 58.790 40.741 0.00 0.00 0.00 2.59
2121 2355 9.263538 CACTGTAGAGGTAGTAACATAGACTAG 57.736 40.741 0.00 0.00 30.08 2.57
2122 2356 8.991275 ACTGTAGAGGTAGTAACATAGACTAGT 58.009 37.037 0.00 0.00 30.08 2.57
2129 2363 8.848182 AGGTAGTAACATAGACTAGTAACATGC 58.152 37.037 0.00 0.00 30.08 4.06
2130 2364 8.081025 GGTAGTAACATAGACTAGTAACATGCC 58.919 40.741 0.00 0.00 30.08 4.40
2131 2365 7.052142 AGTAACATAGACTAGTAACATGCCC 57.948 40.000 0.00 0.00 0.00 5.36
2132 2366 5.950544 AACATAGACTAGTAACATGCCCA 57.049 39.130 0.00 0.00 0.00 5.36
2133 2367 6.500589 AACATAGACTAGTAACATGCCCAT 57.499 37.500 0.00 0.00 0.00 4.00
2134 2368 5.858381 ACATAGACTAGTAACATGCCCATG 58.142 41.667 6.71 6.71 44.15 3.66
2148 2382 5.858381 CATGCCCATGTTACTAGTCTATGT 58.142 41.667 0.00 0.00 34.23 2.29
2149 2383 5.950544 TGCCCATGTTACTAGTCTATGTT 57.049 39.130 0.00 0.00 0.00 2.71
2150 2384 7.441836 CATGCCCATGTTACTAGTCTATGTTA 58.558 38.462 0.00 0.00 34.23 2.41
2151 2385 6.812998 TGCCCATGTTACTAGTCTATGTTAC 58.187 40.000 0.00 0.00 0.00 2.50
2152 2386 6.610020 TGCCCATGTTACTAGTCTATGTTACT 59.390 38.462 0.00 0.00 0.00 2.24
2153 2387 7.781219 TGCCCATGTTACTAGTCTATGTTACTA 59.219 37.037 0.00 0.00 0.00 1.82
2154 2388 8.804204 GCCCATGTTACTAGTCTATGTTACTAT 58.196 37.037 0.00 0.00 0.00 2.12
2163 2397 8.861086 ACTAGTCTATGTTACTATCCATTGTGG 58.139 37.037 0.00 0.00 39.43 4.17
2164 2398 6.525629 AGTCTATGTTACTATCCATTGTGGC 58.474 40.000 0.00 0.00 37.47 5.01
2165 2399 6.327626 AGTCTATGTTACTATCCATTGTGGCT 59.672 38.462 0.00 0.00 37.47 4.75
2166 2400 7.509318 AGTCTATGTTACTATCCATTGTGGCTA 59.491 37.037 0.00 0.00 37.47 3.93
2167 2401 7.815068 GTCTATGTTACTATCCATTGTGGCTAG 59.185 40.741 5.55 5.55 40.94 3.42
2169 2403 5.914033 TGTTACTATCCATTGTGGCTAGTC 58.086 41.667 13.92 4.48 43.73 2.59
2211 2445 3.600388 AGAAAGACTAGTTGATTGCCCG 58.400 45.455 0.00 0.00 0.00 6.13
2212 2446 3.008049 AGAAAGACTAGTTGATTGCCCGT 59.992 43.478 0.00 0.00 0.00 5.28
2213 2447 2.386661 AGACTAGTTGATTGCCCGTG 57.613 50.000 0.00 0.00 0.00 4.94
2214 2448 0.727398 GACTAGTTGATTGCCCGTGC 59.273 55.000 0.00 0.00 38.26 5.34
2215 2449 1.019278 ACTAGTTGATTGCCCGTGCG 61.019 55.000 0.00 0.00 41.78 5.34
2216 2450 1.004320 TAGTTGATTGCCCGTGCGT 60.004 52.632 0.00 0.00 41.78 5.24
2217 2451 0.604243 TAGTTGATTGCCCGTGCGTT 60.604 50.000 0.00 0.00 41.78 4.84
2218 2452 1.729131 GTTGATTGCCCGTGCGTTG 60.729 57.895 0.00 0.00 41.78 4.10
2219 2453 3.550339 TTGATTGCCCGTGCGTTGC 62.550 57.895 0.00 0.00 41.78 4.17
2220 2454 4.776647 GATTGCCCGTGCGTTGCC 62.777 66.667 0.00 0.00 41.78 4.52
2234 2468 4.569279 TGCCACGGAGCAAAAGAA 57.431 50.000 0.00 0.00 40.56 2.52
2235 2469 2.029743 TGCCACGGAGCAAAAGAAC 58.970 52.632 0.00 0.00 40.56 3.01
2236 2470 0.749818 TGCCACGGAGCAAAAGAACA 60.750 50.000 0.00 0.00 40.56 3.18
2237 2471 0.317854 GCCACGGAGCAAAAGAACAC 60.318 55.000 0.00 0.00 0.00 3.32
2238 2472 1.021202 CCACGGAGCAAAAGAACACA 58.979 50.000 0.00 0.00 0.00 3.72
2239 2473 1.268539 CCACGGAGCAAAAGAACACAC 60.269 52.381 0.00 0.00 0.00 3.82
2240 2474 1.400142 CACGGAGCAAAAGAACACACA 59.600 47.619 0.00 0.00 0.00 3.72
2241 2475 2.033299 CACGGAGCAAAAGAACACACAT 59.967 45.455 0.00 0.00 0.00 3.21
2242 2476 3.249799 CACGGAGCAAAAGAACACACATA 59.750 43.478 0.00 0.00 0.00 2.29
2243 2477 4.072131 ACGGAGCAAAAGAACACACATAT 58.928 39.130 0.00 0.00 0.00 1.78
2244 2478 4.518970 ACGGAGCAAAAGAACACACATATT 59.481 37.500 0.00 0.00 0.00 1.28
2245 2479 4.853196 CGGAGCAAAAGAACACACATATTG 59.147 41.667 0.00 0.00 0.00 1.90
2246 2480 4.622740 GGAGCAAAAGAACACACATATTGC 59.377 41.667 0.00 0.00 41.34 3.56
2247 2481 5.199024 AGCAAAAGAACACACATATTGCA 57.801 34.783 9.83 0.00 42.95 4.08
2248 2482 5.599732 AGCAAAAGAACACACATATTGCAA 58.400 33.333 0.00 0.00 42.95 4.08
2249 2483 6.225318 AGCAAAAGAACACACATATTGCAAT 58.775 32.000 17.56 17.56 42.95 3.56
2250 2484 6.707161 AGCAAAAGAACACACATATTGCAATT 59.293 30.769 18.75 2.72 42.95 2.32
2251 2485 6.793203 GCAAAAGAACACACATATTGCAATTG 59.207 34.615 18.75 16.75 40.86 2.32
2252 2486 7.307278 GCAAAAGAACACACATATTGCAATTGA 60.307 33.333 18.75 0.00 40.86 2.57
2253 2487 8.714179 CAAAAGAACACACATATTGCAATTGAT 58.286 29.630 18.75 2.71 0.00 2.57
2254 2488 8.836268 AAAGAACACACATATTGCAATTGATT 57.164 26.923 18.75 9.81 0.00 2.57
2255 2489 7.821595 AGAACACACATATTGCAATTGATTG 57.178 32.000 18.75 16.91 40.66 2.67
2267 2501 4.640805 CAATTGATTGCTTTGTGTGCTC 57.359 40.909 0.00 0.00 0.00 4.26
2268 2502 4.052608 CAATTGATTGCTTTGTGTGCTCA 58.947 39.130 0.00 0.00 0.00 4.26
2269 2503 4.530710 ATTGATTGCTTTGTGTGCTCAT 57.469 36.364 0.00 0.00 0.00 2.90
2270 2504 4.325028 TTGATTGCTTTGTGTGCTCATT 57.675 36.364 0.00 0.00 0.00 2.57
2271 2505 3.904571 TGATTGCTTTGTGTGCTCATTC 58.095 40.909 0.00 0.00 0.00 2.67
2272 2506 2.404265 TTGCTTTGTGTGCTCATTCG 57.596 45.000 0.00 0.00 0.00 3.34
2273 2507 1.308047 TGCTTTGTGTGCTCATTCGT 58.692 45.000 0.00 0.00 0.00 3.85
2274 2508 1.264020 TGCTTTGTGTGCTCATTCGTC 59.736 47.619 0.00 0.00 0.00 4.20
2275 2509 1.264020 GCTTTGTGTGCTCATTCGTCA 59.736 47.619 0.00 0.00 0.00 4.35
2276 2510 2.286950 GCTTTGTGTGCTCATTCGTCAA 60.287 45.455 0.00 0.00 0.00 3.18
2277 2511 3.548587 CTTTGTGTGCTCATTCGTCAAG 58.451 45.455 0.00 0.00 0.00 3.02
2278 2512 0.867746 TGTGTGCTCATTCGTCAAGC 59.132 50.000 0.00 0.00 36.56 4.01
2279 2513 0.867746 GTGTGCTCATTCGTCAAGCA 59.132 50.000 0.00 0.00 43.40 3.91
2281 2515 3.304041 TGCTCATTCGTCAAGCACA 57.696 47.368 0.00 0.00 40.91 4.57
2282 2516 1.592064 TGCTCATTCGTCAAGCACAA 58.408 45.000 0.00 0.00 40.91 3.33
2283 2517 1.264020 TGCTCATTCGTCAAGCACAAC 59.736 47.619 0.00 0.00 40.91 3.32
2284 2518 1.264020 GCTCATTCGTCAAGCACAACA 59.736 47.619 0.00 0.00 36.06 3.33
2285 2519 2.095567 GCTCATTCGTCAAGCACAACAT 60.096 45.455 0.00 0.00 36.06 2.71
2286 2520 3.125146 GCTCATTCGTCAAGCACAACATA 59.875 43.478 0.00 0.00 36.06 2.29
2287 2521 4.201851 GCTCATTCGTCAAGCACAACATAT 60.202 41.667 0.00 0.00 36.06 1.78
2288 2522 5.220557 TCATTCGTCAAGCACAACATATG 57.779 39.130 0.00 0.00 0.00 1.78
2289 2523 4.694982 TCATTCGTCAAGCACAACATATGT 59.305 37.500 1.41 1.41 45.34 2.29
2290 2524 5.872070 TCATTCGTCAAGCACAACATATGTA 59.128 36.000 9.21 0.00 41.46 2.29
2291 2525 5.524511 TTCGTCAAGCACAACATATGTAC 57.475 39.130 9.21 0.00 41.46 2.90
2292 2526 3.930229 TCGTCAAGCACAACATATGTACC 59.070 43.478 9.21 0.00 41.46 3.34
2293 2527 3.682377 CGTCAAGCACAACATATGTACCA 59.318 43.478 9.21 0.00 41.46 3.25
2294 2528 4.435518 CGTCAAGCACAACATATGTACCAC 60.436 45.833 9.21 0.00 41.46 4.16
2295 2529 4.454161 GTCAAGCACAACATATGTACCACA 59.546 41.667 9.21 0.00 41.46 4.17
2296 2530 5.049060 GTCAAGCACAACATATGTACCACAA 60.049 40.000 9.21 0.00 41.46 3.33
2297 2531 5.532779 TCAAGCACAACATATGTACCACAAA 59.467 36.000 9.21 0.00 41.46 2.83
2298 2532 6.039829 TCAAGCACAACATATGTACCACAAAA 59.960 34.615 9.21 0.00 41.46 2.44
2299 2533 6.012658 AGCACAACATATGTACCACAAAAG 57.987 37.500 9.21 0.00 41.46 2.27
2300 2534 5.767665 AGCACAACATATGTACCACAAAAGA 59.232 36.000 9.21 0.00 41.46 2.52
2301 2535 6.264292 AGCACAACATATGTACCACAAAAGAA 59.736 34.615 9.21 0.00 41.46 2.52
2302 2536 6.362283 GCACAACATATGTACCACAAAAGAAC 59.638 38.462 9.21 0.00 41.46 3.01
2303 2537 7.421599 CACAACATATGTACCACAAAAGAACA 58.578 34.615 9.21 0.00 41.46 3.18
2304 2538 7.378461 CACAACATATGTACCACAAAAGAACAC 59.622 37.037 9.21 0.00 41.46 3.32
2305 2539 7.067615 ACAACATATGTACCACAAAAGAACACA 59.932 33.333 9.21 0.00 41.63 3.72
2306 2540 6.966021 ACATATGTACCACAAAAGAACACAC 58.034 36.000 6.56 0.00 0.00 3.82
2307 2541 6.544197 ACATATGTACCACAAAAGAACACACA 59.456 34.615 6.56 0.00 0.00 3.72
2308 2542 7.230510 ACATATGTACCACAAAAGAACACACAT 59.769 33.333 6.56 0.00 0.00 3.21
2309 2543 8.726068 CATATGTACCACAAAAGAACACACATA 58.274 33.333 0.00 0.00 32.64 2.29
2310 2544 7.575414 ATGTACCACAAAAGAACACACATAA 57.425 32.000 0.00 0.00 0.00 1.90
2311 2545 7.575414 TGTACCACAAAAGAACACACATAAT 57.425 32.000 0.00 0.00 0.00 1.28
2312 2546 8.001881 TGTACCACAAAAGAACACACATAATT 57.998 30.769 0.00 0.00 0.00 1.40
2313 2547 9.121658 TGTACCACAAAAGAACACACATAATTA 57.878 29.630 0.00 0.00 0.00 1.40
2326 2560 9.905713 AACACACATAATTATGTACTCATTCCT 57.094 29.630 26.59 1.97 44.57 3.36
2327 2561 9.547753 ACACACATAATTATGTACTCATTCCTC 57.452 33.333 26.59 0.00 44.57 3.71
2328 2562 9.546428 CACACATAATTATGTACTCATTCCTCA 57.454 33.333 26.59 0.00 44.57 3.86
2331 2565 9.784531 ACATAATTATGTACTCATTCCTCAAGG 57.215 33.333 26.07 0.00 44.54 3.61
2332 2566 9.224267 CATAATTATGTACTCATTCCTCAAGGG 57.776 37.037 16.03 0.00 35.70 3.95
2333 2567 3.567478 ATGTACTCATTCCTCAAGGGC 57.433 47.619 0.00 0.00 35.41 5.19
2334 2568 2.265367 TGTACTCATTCCTCAAGGGCA 58.735 47.619 0.00 0.00 35.41 5.36
2335 2569 2.642311 TGTACTCATTCCTCAAGGGCAA 59.358 45.455 0.00 0.00 35.41 4.52
2336 2570 2.206576 ACTCATTCCTCAAGGGCAAC 57.793 50.000 0.00 0.00 35.41 4.17
2337 2571 1.425066 ACTCATTCCTCAAGGGCAACA 59.575 47.619 0.00 0.00 39.74 3.33
2338 2572 2.042162 ACTCATTCCTCAAGGGCAACAT 59.958 45.455 0.00 0.00 39.74 2.71
2339 2573 3.266772 ACTCATTCCTCAAGGGCAACATA 59.733 43.478 0.00 0.00 39.74 2.29
2340 2574 4.079558 ACTCATTCCTCAAGGGCAACATAT 60.080 41.667 0.00 0.00 39.74 1.78
2341 2575 4.209538 TCATTCCTCAAGGGCAACATATG 58.790 43.478 0.00 0.00 39.74 1.78
2342 2576 3.737559 TTCCTCAAGGGCAACATATGT 57.262 42.857 1.41 1.41 39.74 2.29
2343 2577 3.281727 TCCTCAAGGGCAACATATGTC 57.718 47.619 9.23 0.00 39.74 3.06
2344 2578 1.942657 CCTCAAGGGCAACATATGTCG 59.057 52.381 9.23 0.00 33.14 4.35
2345 2579 2.419990 CCTCAAGGGCAACATATGTCGA 60.420 50.000 9.23 0.00 33.14 4.20
2346 2580 3.470709 CTCAAGGGCAACATATGTCGAT 58.529 45.455 9.23 0.00 33.14 3.59
2347 2581 3.879295 CTCAAGGGCAACATATGTCGATT 59.121 43.478 9.23 0.00 33.14 3.34
2348 2582 3.876914 TCAAGGGCAACATATGTCGATTC 59.123 43.478 9.23 0.00 33.14 2.52
2349 2583 3.558931 AGGGCAACATATGTCGATTCA 57.441 42.857 9.23 0.00 33.14 2.57
2350 2584 3.884895 AGGGCAACATATGTCGATTCAA 58.115 40.909 9.23 0.00 33.14 2.69
2351 2585 4.269183 AGGGCAACATATGTCGATTCAAA 58.731 39.130 9.23 0.00 33.14 2.69
2352 2586 4.704540 AGGGCAACATATGTCGATTCAAAA 59.295 37.500 9.23 0.00 33.14 2.44
2353 2587 5.184864 AGGGCAACATATGTCGATTCAAAAA 59.815 36.000 9.23 0.00 33.14 1.94
2373 2607 5.729974 AAAAAGTGTTCTTCCACTCGTAC 57.270 39.130 0.00 0.00 44.74 3.67
2374 2608 3.382048 AAGTGTTCTTCCACTCGTACC 57.618 47.619 0.00 0.00 44.74 3.34
2375 2609 1.617357 AGTGTTCTTCCACTCGTACCC 59.383 52.381 0.00 0.00 41.84 3.69
2376 2610 1.342174 GTGTTCTTCCACTCGTACCCA 59.658 52.381 0.00 0.00 32.50 4.51
2377 2611 2.028385 GTGTTCTTCCACTCGTACCCAT 60.028 50.000 0.00 0.00 32.50 4.00
2378 2612 2.028476 TGTTCTTCCACTCGTACCCATG 60.028 50.000 0.00 0.00 0.00 3.66
2379 2613 1.933021 TCTTCCACTCGTACCCATGT 58.067 50.000 0.00 0.00 0.00 3.21
2380 2614 2.253610 TCTTCCACTCGTACCCATGTT 58.746 47.619 0.00 0.00 0.00 2.71
2381 2615 2.028476 TCTTCCACTCGTACCCATGTTG 60.028 50.000 0.00 0.00 0.00 3.33
2382 2616 0.036765 TCCACTCGTACCCATGTTGC 60.037 55.000 0.00 0.00 0.00 4.17
2383 2617 0.321210 CCACTCGTACCCATGTTGCA 60.321 55.000 0.00 0.00 0.00 4.08
2384 2618 1.678728 CCACTCGTACCCATGTTGCAT 60.679 52.381 0.00 0.00 0.00 3.96
2385 2619 1.398041 CACTCGTACCCATGTTGCATG 59.602 52.381 2.38 2.38 0.00 4.06
2386 2620 1.277842 ACTCGTACCCATGTTGCATGA 59.722 47.619 10.34 0.00 0.00 3.07
2387 2621 2.290008 ACTCGTACCCATGTTGCATGAA 60.290 45.455 10.34 0.00 0.00 2.57
2388 2622 2.746904 CTCGTACCCATGTTGCATGAAA 59.253 45.455 10.34 0.00 0.00 2.69
2389 2623 3.149981 TCGTACCCATGTTGCATGAAAA 58.850 40.909 10.34 0.00 0.00 2.29
2390 2624 3.761218 TCGTACCCATGTTGCATGAAAAT 59.239 39.130 10.34 0.00 0.00 1.82
2391 2625 3.858812 CGTACCCATGTTGCATGAAAATG 59.141 43.478 10.34 0.00 0.00 2.32
2392 2626 3.337694 ACCCATGTTGCATGAAAATGG 57.662 42.857 15.55 15.55 38.01 3.16
2393 2627 2.638855 ACCCATGTTGCATGAAAATGGT 59.361 40.909 18.66 8.46 36.80 3.55
2394 2628 3.072768 ACCCATGTTGCATGAAAATGGTT 59.927 39.130 18.66 8.46 36.80 3.67
2395 2629 3.437395 CCCATGTTGCATGAAAATGGTTG 59.563 43.478 18.66 7.58 36.80 3.77
2396 2630 3.120130 CCATGTTGCATGAAAATGGTTGC 60.120 43.478 14.77 0.00 34.35 4.17
2397 2631 2.492012 TGTTGCATGAAAATGGTTGCC 58.508 42.857 0.00 0.00 34.20 4.52
2398 2632 2.158856 TGTTGCATGAAAATGGTTGCCA 60.159 40.909 0.00 0.00 38.19 4.92
2399 2633 2.877168 GTTGCATGAAAATGGTTGCCAA 59.123 40.909 0.00 0.00 36.95 4.52
2400 2634 3.204306 TGCATGAAAATGGTTGCCAAA 57.796 38.095 0.00 0.00 36.95 3.28
2401 2635 3.752665 TGCATGAAAATGGTTGCCAAAT 58.247 36.364 0.00 0.00 36.95 2.32
2402 2636 4.903054 TGCATGAAAATGGTTGCCAAATA 58.097 34.783 0.00 0.00 36.95 1.40
2403 2637 5.498393 TGCATGAAAATGGTTGCCAAATAT 58.502 33.333 0.00 0.00 36.95 1.28
2404 2638 5.585445 TGCATGAAAATGGTTGCCAAATATC 59.415 36.000 0.00 0.00 36.95 1.63
2405 2639 5.007921 GCATGAAAATGGTTGCCAAATATCC 59.992 40.000 0.00 0.00 36.95 2.59
2406 2640 5.752036 TGAAAATGGTTGCCAAATATCCA 57.248 34.783 0.00 0.00 36.95 3.41
2407 2641 5.486526 TGAAAATGGTTGCCAAATATCCAC 58.513 37.500 0.00 0.00 36.95 4.02
2408 2642 5.248020 TGAAAATGGTTGCCAAATATCCACT 59.752 36.000 0.00 0.00 36.95 4.00
2409 2643 5.760484 AAATGGTTGCCAAATATCCACTT 57.240 34.783 0.00 0.00 36.95 3.16
2410 2644 6.865834 AAATGGTTGCCAAATATCCACTTA 57.134 33.333 0.00 0.00 36.95 2.24
2411 2645 7.436320 AAATGGTTGCCAAATATCCACTTAT 57.564 32.000 0.00 0.00 36.95 1.73
2412 2646 8.546083 AAATGGTTGCCAAATATCCACTTATA 57.454 30.769 0.00 0.00 36.95 0.98
2413 2647 8.725606 AATGGTTGCCAAATATCCACTTATAT 57.274 30.769 0.00 0.00 36.95 0.86
2414 2648 7.759489 TGGTTGCCAAATATCCACTTATATC 57.241 36.000 0.00 0.00 0.00 1.63
2415 2649 6.719370 TGGTTGCCAAATATCCACTTATATCC 59.281 38.462 0.00 0.00 0.00 2.59
2416 2650 6.152831 GGTTGCCAAATATCCACTTATATCCC 59.847 42.308 0.00 0.00 0.00 3.85
2417 2651 6.461577 TGCCAAATATCCACTTATATCCCA 57.538 37.500 0.00 0.00 0.00 4.37
2418 2652 6.857848 TGCCAAATATCCACTTATATCCCAA 58.142 36.000 0.00 0.00 0.00 4.12
2419 2653 7.301420 TGCCAAATATCCACTTATATCCCAAA 58.699 34.615 0.00 0.00 0.00 3.28
2420 2654 7.955185 TGCCAAATATCCACTTATATCCCAAAT 59.045 33.333 0.00 0.00 0.00 2.32
2421 2655 8.470002 GCCAAATATCCACTTATATCCCAAATC 58.530 37.037 0.00 0.00 0.00 2.17
2422 2656 9.759473 CCAAATATCCACTTATATCCCAAATCT 57.241 33.333 0.00 0.00 0.00 2.40
2427 2661 7.392766 TCCACTTATATCCCAAATCTCATGT 57.607 36.000 0.00 0.00 0.00 3.21
2428 2662 7.453393 TCCACTTATATCCCAAATCTCATGTC 58.547 38.462 0.00 0.00 0.00 3.06
2429 2663 6.656693 CCACTTATATCCCAAATCTCATGTCC 59.343 42.308 0.00 0.00 0.00 4.02
2430 2664 7.226441 CACTTATATCCCAAATCTCATGTCCA 58.774 38.462 0.00 0.00 0.00 4.02
2431 2665 7.720957 CACTTATATCCCAAATCTCATGTCCAA 59.279 37.037 0.00 0.00 0.00 3.53
2432 2666 8.451245 ACTTATATCCCAAATCTCATGTCCAAT 58.549 33.333 0.00 0.00 0.00 3.16
2433 2667 9.964354 CTTATATCCCAAATCTCATGTCCAATA 57.036 33.333 0.00 0.00 0.00 1.90
2435 2669 6.966534 ATCCCAAATCTCATGTCCAATAAC 57.033 37.500 0.00 0.00 0.00 1.89
2436 2670 5.825532 TCCCAAATCTCATGTCCAATAACA 58.174 37.500 0.00 0.00 0.00 2.41
2437 2671 6.434302 TCCCAAATCTCATGTCCAATAACAT 58.566 36.000 0.00 0.00 40.49 2.71
2438 2672 6.547141 TCCCAAATCTCATGTCCAATAACATC 59.453 38.462 0.00 0.00 37.78 3.06
2439 2673 6.548622 CCCAAATCTCATGTCCAATAACATCT 59.451 38.462 0.00 0.00 37.78 2.90
2440 2674 7.720957 CCCAAATCTCATGTCCAATAACATCTA 59.279 37.037 0.00 0.00 37.78 1.98
2441 2675 9.123902 CCAAATCTCATGTCCAATAACATCTAA 57.876 33.333 0.00 0.00 37.78 2.10
2446 2680 9.379770 TCTCATGTCCAATAACATCTAATAGGA 57.620 33.333 0.00 0.00 37.78 2.94
2459 2693 9.614792 AACATCTAATAGGAAATACAAGTCACC 57.385 33.333 0.00 0.00 0.00 4.02
2460 2694 8.993424 ACATCTAATAGGAAATACAAGTCACCT 58.007 33.333 0.00 0.00 0.00 4.00
2461 2695 9.482627 CATCTAATAGGAAATACAAGTCACCTC 57.517 37.037 0.00 0.00 0.00 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 6.217693 AGTTTTGGTATTGGGAAGAGGAGTAT 59.782 38.462 0.00 0.00 0.00 2.12
36 37 4.280677 TGCAAGTTTTGGTATTGGGAAGAG 59.719 41.667 0.00 0.00 0.00 2.85
129 131 0.180406 AACGATGGGGTATGTGCTCC 59.820 55.000 0.00 0.00 0.00 4.70
184 186 2.732094 GCCGCGTGTCTACAACGT 60.732 61.111 4.92 0.00 0.00 3.99
217 219 0.023732 CATTAAGTGCGACGACTGCG 59.976 55.000 0.00 0.00 44.79 5.18
297 299 1.883084 GGTTCGCCGGCAGATACAG 60.883 63.158 28.98 8.23 0.00 2.74
344 346 3.715097 GCAGGCAGTGGCTCCTCT 61.715 66.667 17.69 0.00 40.87 3.69
529 531 4.439901 AGCCCCTTCCCCTCCCTC 62.440 72.222 0.00 0.00 0.00 4.30
530 532 4.767892 CAGCCCCTTCCCCTCCCT 62.768 72.222 0.00 0.00 0.00 4.20
598 618 4.080129 CCAATCTTCTCCATTCTTCCCTCA 60.080 45.833 0.00 0.00 0.00 3.86
608 641 0.471617 CGCCCTCCAATCTTCTCCAT 59.528 55.000 0.00 0.00 0.00 3.41
651 684 1.470051 GGGCGCCTTTTTCTATCCAA 58.530 50.000 28.56 0.00 0.00 3.53
652 685 0.395173 GGGGCGCCTTTTTCTATCCA 60.395 55.000 28.56 0.00 0.00 3.41
731 764 2.302733 GCTTTTGGGGTGAAATGGACAT 59.697 45.455 0.00 0.00 0.00 3.06
771 804 3.897239 TGTGTCCACTTTTGAACCATCT 58.103 40.909 0.00 0.00 0.00 2.90
777 810 5.010112 TGTCTGTTTTGTGTCCACTTTTGAA 59.990 36.000 0.00 0.00 0.00 2.69
780 813 5.461032 TTGTCTGTTTTGTGTCCACTTTT 57.539 34.783 0.00 0.00 0.00 2.27
785 818 5.054390 GACTTTTGTCTGTTTTGTGTCCA 57.946 39.130 0.00 0.00 45.55 4.02
800 833 2.127383 GGCGCGAACGGACTTTTG 60.127 61.111 12.10 0.00 40.57 2.44
865 898 2.579787 GACCTCATCGTGTCCGCG 60.580 66.667 0.00 0.00 0.00 6.46
885 918 3.842925 TTGAGGCCAACTCCACCGC 62.843 63.158 5.01 0.00 46.01 5.68
886 919 0.609131 ATTTGAGGCCAACTCCACCG 60.609 55.000 5.01 0.00 46.01 4.94
887 920 1.177401 GATTTGAGGCCAACTCCACC 58.823 55.000 5.01 0.00 46.01 4.61
888 921 2.087646 GAGATTTGAGGCCAACTCCAC 58.912 52.381 5.01 0.00 46.01 4.02
889 922 1.704628 TGAGATTTGAGGCCAACTCCA 59.295 47.619 5.01 0.00 46.01 3.86
890 923 2.496899 TGAGATTTGAGGCCAACTCC 57.503 50.000 5.01 0.00 46.01 3.85
891 924 4.142293 GGATTTGAGATTTGAGGCCAACTC 60.142 45.833 5.01 4.79 46.78 3.01
892 925 3.766051 GGATTTGAGATTTGAGGCCAACT 59.234 43.478 5.01 0.00 30.88 3.16
893 926 3.118992 GGGATTTGAGATTTGAGGCCAAC 60.119 47.826 5.01 0.00 30.88 3.77
894 927 3.099141 GGGATTTGAGATTTGAGGCCAA 58.901 45.455 5.01 0.00 0.00 4.52
895 928 2.624029 GGGGATTTGAGATTTGAGGCCA 60.624 50.000 5.01 0.00 0.00 5.36
896 929 2.034878 GGGGATTTGAGATTTGAGGCC 58.965 52.381 0.00 0.00 0.00 5.19
897 930 2.738743 TGGGGATTTGAGATTTGAGGC 58.261 47.619 0.00 0.00 0.00 4.70
898 931 3.567164 CGATGGGGATTTGAGATTTGAGG 59.433 47.826 0.00 0.00 0.00 3.86
940 974 1.216710 GAGAAGGCGGGAGAGTGTG 59.783 63.158 0.00 0.00 0.00 3.82
969 1003 0.248621 GGATTTGAGATTTGGCGCGG 60.249 55.000 8.83 0.00 0.00 6.46
1516 1633 8.530311 AGCAGAAGATAGAACATATACTCCATG 58.470 37.037 0.00 0.00 0.00 3.66
1520 1637 9.973450 TCAAAGCAGAAGATAGAACATATACTC 57.027 33.333 0.00 0.00 0.00 2.59
1578 1736 6.812656 TGTAAAACTCCATAGCATGCAAAATG 59.187 34.615 21.98 18.63 0.00 2.32
1764 1963 4.142902 CGTTGGCATTTGGTAGTACTTGAG 60.143 45.833 0.00 0.00 0.00 3.02
1799 2002 2.158827 TGACTACAGCAGCTGGACAAAA 60.159 45.455 26.38 4.70 35.51 2.44
1827 2060 4.857037 GCGACAACCAATTACAGGAAAATC 59.143 41.667 0.00 0.00 0.00 2.17
1855 2089 2.203070 GCGGTGATACCTGGCTGG 60.203 66.667 9.11 9.11 42.93 4.85
1856 2090 0.464373 AATGCGGTGATACCTGGCTG 60.464 55.000 0.00 0.00 35.66 4.85
1857 2091 0.179045 GAATGCGGTGATACCTGGCT 60.179 55.000 0.00 0.00 35.66 4.75
1858 2092 0.179045 AGAATGCGGTGATACCTGGC 60.179 55.000 0.00 0.00 35.66 4.85
1903 2137 5.073144 ACCACCTATGTTACTCCCATTATGG 59.927 44.000 3.85 3.85 37.25 2.74
1904 2138 6.187727 ACCACCTATGTTACTCCCATTATG 57.812 41.667 0.00 0.00 0.00 1.90
1905 2139 7.348801 TGTTACCACCTATGTTACTCCCATTAT 59.651 37.037 0.00 0.00 0.00 1.28
1906 2140 6.673097 TGTTACCACCTATGTTACTCCCATTA 59.327 38.462 0.00 0.00 0.00 1.90
1907 2141 5.489637 TGTTACCACCTATGTTACTCCCATT 59.510 40.000 0.00 0.00 0.00 3.16
1908 2142 5.034200 TGTTACCACCTATGTTACTCCCAT 58.966 41.667 0.00 0.00 0.00 4.00
1909 2143 4.427637 TGTTACCACCTATGTTACTCCCA 58.572 43.478 0.00 0.00 0.00 4.37
1910 2144 5.129815 TGATGTTACCACCTATGTTACTCCC 59.870 44.000 0.00 0.00 0.00 4.30
1911 2145 6.047231 GTGATGTTACCACCTATGTTACTCC 58.953 44.000 0.00 0.00 0.00 3.85
1912 2146 6.534079 GTGTGATGTTACCACCTATGTTACTC 59.466 42.308 0.00 0.00 33.80 2.59
1913 2147 6.403878 GTGTGATGTTACCACCTATGTTACT 58.596 40.000 0.00 0.00 33.80 2.24
1914 2148 5.583457 GGTGTGATGTTACCACCTATGTTAC 59.417 44.000 0.00 0.00 36.94 2.50
1915 2149 5.486063 AGGTGTGATGTTACCACCTATGTTA 59.514 40.000 8.72 0.00 43.67 2.41
1916 2150 4.288626 AGGTGTGATGTTACCACCTATGTT 59.711 41.667 8.72 0.00 43.67 2.71
1917 2151 3.844211 AGGTGTGATGTTACCACCTATGT 59.156 43.478 8.72 0.00 43.67 2.29
1918 2152 4.487714 AGGTGTGATGTTACCACCTATG 57.512 45.455 8.72 0.00 43.67 2.23
1921 2155 4.362677 AGATAGGTGTGATGTTACCACCT 58.637 43.478 14.34 14.34 46.68 4.00
1922 2156 4.755266 AGATAGGTGTGATGTTACCACC 57.245 45.455 0.00 0.00 39.46 4.61
1923 2157 5.739358 GCCTAGATAGGTGTGATGTTACCAC 60.739 48.000 7.71 0.00 45.42 4.16
1924 2158 4.344102 GCCTAGATAGGTGTGATGTTACCA 59.656 45.833 7.71 0.00 45.42 3.25
1925 2159 4.344102 TGCCTAGATAGGTGTGATGTTACC 59.656 45.833 7.71 0.00 45.42 2.85
1926 2160 5.531122 TGCCTAGATAGGTGTGATGTTAC 57.469 43.478 7.71 0.00 45.42 2.50
1927 2161 6.553953 TTTGCCTAGATAGGTGTGATGTTA 57.446 37.500 7.71 0.00 45.42 2.41
1928 2162 5.435686 TTTGCCTAGATAGGTGTGATGTT 57.564 39.130 7.71 0.00 45.42 2.71
1929 2163 5.435686 TTTTGCCTAGATAGGTGTGATGT 57.564 39.130 7.71 0.00 45.42 3.06
1930 2164 7.445121 TCTATTTTGCCTAGATAGGTGTGATG 58.555 38.462 7.71 0.00 45.42 3.07
1931 2165 7.618019 TCTATTTTGCCTAGATAGGTGTGAT 57.382 36.000 7.71 1.36 45.42 3.06
1932 2166 7.290014 TCATCTATTTTGCCTAGATAGGTGTGA 59.710 37.037 7.71 3.51 45.42 3.58
1933 2167 7.445121 TCATCTATTTTGCCTAGATAGGTGTG 58.555 38.462 7.71 1.87 45.42 3.82
1934 2168 7.618019 TCATCTATTTTGCCTAGATAGGTGT 57.382 36.000 7.71 0.00 45.42 4.16
1935 2169 8.099537 ACATCATCTATTTTGCCTAGATAGGTG 58.900 37.037 7.71 0.00 45.42 4.00
1936 2170 8.099537 CACATCATCTATTTTGCCTAGATAGGT 58.900 37.037 7.71 0.00 45.42 3.08
1937 2171 7.551974 CCACATCATCTATTTTGCCTAGATAGG 59.448 40.741 1.23 1.23 46.42 2.57
1938 2172 7.065563 GCCACATCATCTATTTTGCCTAGATAG 59.934 40.741 0.00 0.00 34.84 2.08
1939 2173 6.881065 GCCACATCATCTATTTTGCCTAGATA 59.119 38.462 0.00 0.00 34.84 1.98
1940 2174 5.709164 GCCACATCATCTATTTTGCCTAGAT 59.291 40.000 0.00 0.00 36.58 1.98
1941 2175 5.065914 GCCACATCATCTATTTTGCCTAGA 58.934 41.667 0.00 0.00 0.00 2.43
1942 2176 4.823442 TGCCACATCATCTATTTTGCCTAG 59.177 41.667 0.00 0.00 0.00 3.02
1943 2177 4.790937 TGCCACATCATCTATTTTGCCTA 58.209 39.130 0.00 0.00 0.00 3.93
1944 2178 3.634504 TGCCACATCATCTATTTTGCCT 58.365 40.909 0.00 0.00 0.00 4.75
1945 2179 4.202182 ACATGCCACATCATCTATTTTGCC 60.202 41.667 0.00 0.00 0.00 4.52
1946 2180 4.940463 ACATGCCACATCATCTATTTTGC 58.060 39.130 0.00 0.00 0.00 3.68
1951 2185 9.743581 TCATTAATTACATGCCACATCATCTAT 57.256 29.630 0.00 0.00 0.00 1.98
1952 2186 9.571816 TTCATTAATTACATGCCACATCATCTA 57.428 29.630 0.00 0.00 0.00 1.98
1953 2187 8.467963 TTCATTAATTACATGCCACATCATCT 57.532 30.769 0.00 0.00 0.00 2.90
1954 2188 8.570488 TCTTCATTAATTACATGCCACATCATC 58.430 33.333 0.00 0.00 0.00 2.92
1955 2189 8.467963 TCTTCATTAATTACATGCCACATCAT 57.532 30.769 0.00 0.00 0.00 2.45
1956 2190 7.878547 TCTTCATTAATTACATGCCACATCA 57.121 32.000 0.00 0.00 0.00 3.07
1957 2191 9.241317 CTTTCTTCATTAATTACATGCCACATC 57.759 33.333 0.00 0.00 0.00 3.06
1958 2192 8.970020 TCTTTCTTCATTAATTACATGCCACAT 58.030 29.630 0.00 0.00 0.00 3.21
1959 2193 8.347004 TCTTTCTTCATTAATTACATGCCACA 57.653 30.769 0.00 0.00 0.00 4.17
1960 2194 8.677300 TCTCTTTCTTCATTAATTACATGCCAC 58.323 33.333 0.00 0.00 0.00 5.01
1961 2195 8.806429 TCTCTTTCTTCATTAATTACATGCCA 57.194 30.769 0.00 0.00 0.00 4.92
1962 2196 9.113838 TCTCTCTTTCTTCATTAATTACATGCC 57.886 33.333 0.00 0.00 0.00 4.40
1963 2197 9.928236 GTCTCTCTTTCTTCATTAATTACATGC 57.072 33.333 0.00 0.00 0.00 4.06
1969 2203 9.730705 TCACATGTCTCTCTTTCTTCATTAATT 57.269 29.630 0.00 0.00 0.00 1.40
1970 2204 9.902684 ATCACATGTCTCTCTTTCTTCATTAAT 57.097 29.630 0.00 0.00 0.00 1.40
1973 2207 9.160496 GTTATCACATGTCTCTCTTTCTTCATT 57.840 33.333 0.00 0.00 0.00 2.57
1974 2208 8.316946 TGTTATCACATGTCTCTCTTTCTTCAT 58.683 33.333 0.00 0.00 0.00 2.57
1975 2209 7.670364 TGTTATCACATGTCTCTCTTTCTTCA 58.330 34.615 0.00 0.00 0.00 3.02
1976 2210 8.715191 ATGTTATCACATGTCTCTCTTTCTTC 57.285 34.615 0.00 0.00 42.46 2.87
1977 2211 9.814899 CTATGTTATCACATGTCTCTCTTTCTT 57.185 33.333 0.00 0.00 43.92 2.52
1978 2212 7.925483 GCTATGTTATCACATGTCTCTCTTTCT 59.075 37.037 0.00 0.00 43.92 2.52
1979 2213 7.925483 AGCTATGTTATCACATGTCTCTCTTTC 59.075 37.037 0.00 0.00 43.92 2.62
1980 2214 7.790027 AGCTATGTTATCACATGTCTCTCTTT 58.210 34.615 0.00 0.00 43.92 2.52
1981 2215 7.358770 AGCTATGTTATCACATGTCTCTCTT 57.641 36.000 0.00 0.00 43.92 2.85
1982 2216 6.975196 AGCTATGTTATCACATGTCTCTCT 57.025 37.500 0.00 0.00 43.92 3.10
1983 2217 9.703892 AATTAGCTATGTTATCACATGTCTCTC 57.296 33.333 0.00 0.00 43.92 3.20
1991 2225 9.529325 GTGACAGTAATTAGCTATGTTATCACA 57.471 33.333 16.84 4.15 37.31 3.58
1992 2226 9.529325 TGTGACAGTAATTAGCTATGTTATCAC 57.471 33.333 15.89 15.89 0.00 3.06
1996 2230 9.529325 GTGATGTGACAGTAATTAGCTATGTTA 57.471 33.333 0.00 0.00 0.00 2.41
1997 2231 8.040727 TGTGATGTGACAGTAATTAGCTATGTT 58.959 33.333 0.00 0.00 0.00 2.71
1998 2232 7.492669 GTGTGATGTGACAGTAATTAGCTATGT 59.507 37.037 0.00 0.00 0.00 2.29
1999 2233 7.492344 TGTGTGATGTGACAGTAATTAGCTATG 59.508 37.037 0.00 0.00 0.00 2.23
2000 2234 7.555965 TGTGTGATGTGACAGTAATTAGCTAT 58.444 34.615 0.00 0.00 0.00 2.97
2001 2235 6.930731 TGTGTGATGTGACAGTAATTAGCTA 58.069 36.000 0.00 0.00 0.00 3.32
2002 2236 5.793817 TGTGTGATGTGACAGTAATTAGCT 58.206 37.500 0.00 0.00 0.00 3.32
2003 2237 6.668541 ATGTGTGATGTGACAGTAATTAGC 57.331 37.500 0.00 0.00 0.00 3.09
2004 2238 9.533253 TGATATGTGTGATGTGACAGTAATTAG 57.467 33.333 0.00 0.00 0.00 1.73
2005 2239 9.883142 TTGATATGTGTGATGTGACAGTAATTA 57.117 29.630 0.00 0.00 0.00 1.40
2006 2240 8.791327 TTGATATGTGTGATGTGACAGTAATT 57.209 30.769 0.00 0.00 0.00 1.40
2007 2241 7.496920 CCTTGATATGTGTGATGTGACAGTAAT 59.503 37.037 0.00 0.00 0.00 1.89
2008 2242 6.818142 CCTTGATATGTGTGATGTGACAGTAA 59.182 38.462 0.00 0.00 0.00 2.24
2009 2243 6.340522 CCTTGATATGTGTGATGTGACAGTA 58.659 40.000 0.00 0.00 0.00 2.74
2010 2244 5.181009 CCTTGATATGTGTGATGTGACAGT 58.819 41.667 0.00 0.00 0.00 3.55
2011 2245 4.034858 GCCTTGATATGTGTGATGTGACAG 59.965 45.833 0.00 0.00 0.00 3.51
2012 2246 3.940852 GCCTTGATATGTGTGATGTGACA 59.059 43.478 0.00 0.00 0.00 3.58
2013 2247 3.940852 TGCCTTGATATGTGTGATGTGAC 59.059 43.478 0.00 0.00 0.00 3.67
2014 2248 4.219264 TGCCTTGATATGTGTGATGTGA 57.781 40.909 0.00 0.00 0.00 3.58
2015 2249 4.637091 TCTTGCCTTGATATGTGTGATGTG 59.363 41.667 0.00 0.00 0.00 3.21
2016 2250 4.847198 TCTTGCCTTGATATGTGTGATGT 58.153 39.130 0.00 0.00 0.00 3.06
2017 2251 5.298527 ACATCTTGCCTTGATATGTGTGATG 59.701 40.000 0.00 0.00 35.23 3.07
2018 2252 5.298527 CACATCTTGCCTTGATATGTGTGAT 59.701 40.000 0.00 0.00 41.46 3.06
2019 2253 4.637091 CACATCTTGCCTTGATATGTGTGA 59.363 41.667 0.00 0.00 41.46 3.58
2020 2254 4.916870 CACATCTTGCCTTGATATGTGTG 58.083 43.478 0.00 0.00 41.46 3.82
2023 2257 5.108187 AGACACATCTTGCCTTGATATGT 57.892 39.130 0.00 0.00 34.70 2.29
2024 2258 7.064371 GCTATAGACACATCTTGCCTTGATATG 59.936 40.741 3.21 0.00 36.29 1.78
2025 2259 7.102346 GCTATAGACACATCTTGCCTTGATAT 58.898 38.462 3.21 0.00 36.29 1.63
2026 2260 6.459066 GCTATAGACACATCTTGCCTTGATA 58.541 40.000 3.21 0.00 36.29 2.15
2027 2261 5.303971 GCTATAGACACATCTTGCCTTGAT 58.696 41.667 3.21 0.00 36.29 2.57
2028 2262 4.443457 GGCTATAGACACATCTTGCCTTGA 60.443 45.833 3.21 0.00 39.50 3.02
2029 2263 3.812053 GGCTATAGACACATCTTGCCTTG 59.188 47.826 3.21 0.00 39.50 3.61
2030 2264 3.713764 AGGCTATAGACACATCTTGCCTT 59.286 43.478 8.68 0.00 45.01 4.35
2031 2265 3.312890 AGGCTATAGACACATCTTGCCT 58.687 45.455 8.68 0.00 43.78 4.75
2032 2266 3.760580 AGGCTATAGACACATCTTGCC 57.239 47.619 8.68 0.00 41.26 4.52
2033 2267 8.833231 TTTATTAGGCTATAGACACATCTTGC 57.167 34.615 8.68 0.00 36.29 4.01
2039 2273 9.764363 CACTTCATTTATTAGGCTATAGACACA 57.236 33.333 8.68 0.00 0.00 3.72
2040 2274 9.765795 ACACTTCATTTATTAGGCTATAGACAC 57.234 33.333 8.68 0.00 0.00 3.67
2043 2277 9.273016 GCAACACTTCATTTATTAGGCTATAGA 57.727 33.333 3.21 0.00 0.00 1.98
2044 2278 9.056005 TGCAACACTTCATTTATTAGGCTATAG 57.944 33.333 0.00 0.00 0.00 1.31
2045 2279 8.972458 TGCAACACTTCATTTATTAGGCTATA 57.028 30.769 0.00 0.00 0.00 1.31
2046 2280 7.880160 TGCAACACTTCATTTATTAGGCTAT 57.120 32.000 0.00 0.00 0.00 2.97
2047 2281 7.339212 ACATGCAACACTTCATTTATTAGGCTA 59.661 33.333 0.00 0.00 0.00 3.93
2048 2282 6.153340 ACATGCAACACTTCATTTATTAGGCT 59.847 34.615 0.00 0.00 0.00 4.58
2049 2283 6.332630 ACATGCAACACTTCATTTATTAGGC 58.667 36.000 0.00 0.00 0.00 3.93
2050 2284 9.289303 GTAACATGCAACACTTCATTTATTAGG 57.711 33.333 0.00 0.00 0.00 2.69
2051 2285 9.289303 GGTAACATGCAACACTTCATTTATTAG 57.711 33.333 0.00 0.00 0.00 1.73
2052 2286 8.797438 TGGTAACATGCAACACTTCATTTATTA 58.203 29.630 0.00 0.00 46.17 0.98
2053 2287 7.665690 TGGTAACATGCAACACTTCATTTATT 58.334 30.769 0.00 0.00 46.17 1.40
2054 2288 7.225784 TGGTAACATGCAACACTTCATTTAT 57.774 32.000 0.00 0.00 46.17 1.40
2055 2289 6.641169 TGGTAACATGCAACACTTCATTTA 57.359 33.333 0.00 0.00 46.17 1.40
2056 2290 5.528043 TGGTAACATGCAACACTTCATTT 57.472 34.783 0.00 0.00 46.17 2.32
2072 2306 6.932960 GTGGGGAGTAACATATATGTGGTAAC 59.067 42.308 18.94 13.91 41.61 2.50
2073 2307 6.847567 AGTGGGGAGTAACATATATGTGGTAA 59.152 38.462 18.94 3.13 41.61 2.85
2074 2308 6.269077 CAGTGGGGAGTAACATATATGTGGTA 59.731 42.308 18.94 6.18 41.61 3.25
2075 2309 5.071788 CAGTGGGGAGTAACATATATGTGGT 59.928 44.000 18.94 7.17 41.61 4.16
2076 2310 5.071788 ACAGTGGGGAGTAACATATATGTGG 59.928 44.000 18.94 0.00 41.61 4.17
2077 2311 6.174720 ACAGTGGGGAGTAACATATATGTG 57.825 41.667 18.94 4.80 41.61 3.21
2078 2312 7.302948 TCTACAGTGGGGAGTAACATATATGT 58.697 38.462 12.75 12.75 44.20 2.29
2079 2313 7.093727 CCTCTACAGTGGGGAGTAACATATATG 60.094 44.444 11.29 11.29 0.00 1.78
2080 2314 6.954684 CCTCTACAGTGGGGAGTAACATATAT 59.045 42.308 11.75 0.00 0.00 0.86
2081 2315 6.125979 ACCTCTACAGTGGGGAGTAACATATA 60.126 42.308 11.75 0.00 33.22 0.86
2082 2316 5.148502 CCTCTACAGTGGGGAGTAACATAT 58.851 45.833 11.75 0.00 0.00 1.78
2083 2317 4.016851 ACCTCTACAGTGGGGAGTAACATA 60.017 45.833 11.75 0.00 33.22 2.29
2084 2318 3.246021 ACCTCTACAGTGGGGAGTAACAT 60.246 47.826 11.75 0.00 33.22 2.71
2085 2319 2.111255 ACCTCTACAGTGGGGAGTAACA 59.889 50.000 11.75 0.00 33.22 2.41
2086 2320 2.817665 ACCTCTACAGTGGGGAGTAAC 58.182 52.381 11.75 0.00 33.22 2.50
2087 2321 3.595138 ACTACCTCTACAGTGGGGAGTAA 59.405 47.826 0.00 0.00 31.54 2.24
2088 2322 3.196300 ACTACCTCTACAGTGGGGAGTA 58.804 50.000 0.00 0.00 31.54 2.59
2089 2323 2.001558 ACTACCTCTACAGTGGGGAGT 58.998 52.381 11.75 4.90 33.22 3.85
2090 2324 2.830651 ACTACCTCTACAGTGGGGAG 57.169 55.000 0.00 1.36 33.22 4.30
2091 2325 3.334581 TGTTACTACCTCTACAGTGGGGA 59.665 47.826 0.00 0.00 33.22 4.81
2092 2326 3.705051 TGTTACTACCTCTACAGTGGGG 58.295 50.000 0.00 0.00 33.22 4.96
2093 2327 6.262720 GTCTATGTTACTACCTCTACAGTGGG 59.737 46.154 0.00 0.00 33.22 4.61
2094 2328 7.055378 AGTCTATGTTACTACCTCTACAGTGG 58.945 42.308 0.00 0.00 34.99 4.00
2095 2329 9.263538 CTAGTCTATGTTACTACCTCTACAGTG 57.736 40.741 0.00 0.00 0.00 3.66
2096 2330 8.991275 ACTAGTCTATGTTACTACCTCTACAGT 58.009 37.037 0.00 0.00 0.00 3.55
2103 2337 8.848182 GCATGTTACTAGTCTATGTTACTACCT 58.152 37.037 0.00 0.00 0.00 3.08
2104 2338 8.081025 GGCATGTTACTAGTCTATGTTACTACC 58.919 40.741 0.00 0.00 0.00 3.18
2105 2339 8.081025 GGGCATGTTACTAGTCTATGTTACTAC 58.919 40.741 0.00 0.00 0.00 2.73
2106 2340 7.781219 TGGGCATGTTACTAGTCTATGTTACTA 59.219 37.037 0.00 0.00 0.00 1.82
2107 2341 6.610020 TGGGCATGTTACTAGTCTATGTTACT 59.390 38.462 0.00 0.00 0.00 2.24
2108 2342 6.812998 TGGGCATGTTACTAGTCTATGTTAC 58.187 40.000 0.00 0.00 0.00 2.50
2109 2343 7.441836 CATGGGCATGTTACTAGTCTATGTTA 58.558 38.462 0.00 0.00 34.23 2.41
2110 2344 5.950544 TGGGCATGTTACTAGTCTATGTT 57.049 39.130 0.00 0.00 0.00 2.71
2111 2345 5.858381 CATGGGCATGTTACTAGTCTATGT 58.142 41.667 0.00 0.00 34.23 2.29
2125 2359 5.858381 ACATAGACTAGTAACATGGGCATG 58.142 41.667 0.00 0.00 44.15 4.06
2126 2360 6.500589 AACATAGACTAGTAACATGGGCAT 57.499 37.500 0.00 0.00 0.00 4.40
2127 2361 5.950544 AACATAGACTAGTAACATGGGCA 57.049 39.130 0.00 0.00 0.00 5.36
2128 2362 7.052142 AGTAACATAGACTAGTAACATGGGC 57.948 40.000 0.00 0.00 0.00 5.36
2137 2371 8.861086 CCACAATGGATAGTAACATAGACTAGT 58.139 37.037 0.00 0.00 40.96 2.57
2138 2372 7.815068 GCCACAATGGATAGTAACATAGACTAG 59.185 40.741 0.00 0.00 40.96 2.57
2139 2373 7.509318 AGCCACAATGGATAGTAACATAGACTA 59.491 37.037 0.00 0.00 40.96 2.59
2140 2374 6.327626 AGCCACAATGGATAGTAACATAGACT 59.672 38.462 0.00 0.00 40.96 3.24
2141 2375 6.525629 AGCCACAATGGATAGTAACATAGAC 58.474 40.000 0.00 0.00 40.96 2.59
2142 2376 6.747414 AGCCACAATGGATAGTAACATAGA 57.253 37.500 0.00 0.00 40.96 1.98
2152 2386 5.903010 TCCTTTAGACTAGCCACAATGGATA 59.097 40.000 0.00 0.00 40.96 2.59
2153 2387 4.721776 TCCTTTAGACTAGCCACAATGGAT 59.278 41.667 0.00 0.00 40.96 3.41
2154 2388 4.101114 TCCTTTAGACTAGCCACAATGGA 58.899 43.478 0.00 0.00 40.96 3.41
2155 2389 4.446371 CTCCTTTAGACTAGCCACAATGG 58.554 47.826 0.00 0.00 41.55 3.16
2156 2390 3.873952 GCTCCTTTAGACTAGCCACAATG 59.126 47.826 0.00 0.00 0.00 2.82
2157 2391 3.519510 TGCTCCTTTAGACTAGCCACAAT 59.480 43.478 0.00 0.00 33.99 2.71
2158 2392 2.903784 TGCTCCTTTAGACTAGCCACAA 59.096 45.455 0.00 0.00 33.99 3.33
2159 2393 2.536066 TGCTCCTTTAGACTAGCCACA 58.464 47.619 0.00 0.00 33.99 4.17
2160 2394 3.493524 GGATGCTCCTTTAGACTAGCCAC 60.494 52.174 0.00 0.00 33.99 5.01
2161 2395 2.700897 GGATGCTCCTTTAGACTAGCCA 59.299 50.000 0.00 0.00 33.99 4.75
2162 2396 2.037902 GGGATGCTCCTTTAGACTAGCC 59.962 54.545 0.00 0.00 36.57 3.93
2163 2397 2.037902 GGGGATGCTCCTTTAGACTAGC 59.962 54.545 0.00 0.00 36.57 3.42
2164 2398 3.582164 AGGGGATGCTCCTTTAGACTAG 58.418 50.000 2.79 0.00 36.57 2.57
2165 2399 3.708236 AGGGGATGCTCCTTTAGACTA 57.292 47.619 2.79 0.00 36.57 2.59
2166 2400 2.577772 AGGGGATGCTCCTTTAGACT 57.422 50.000 2.79 0.00 36.57 3.24
2167 2401 3.712218 AGTTAGGGGATGCTCCTTTAGAC 59.288 47.826 0.00 0.00 36.57 2.59
2168 2402 4.008916 AGTTAGGGGATGCTCCTTTAGA 57.991 45.455 0.00 0.00 36.57 2.10
2169 2403 5.148502 TCTAGTTAGGGGATGCTCCTTTAG 58.851 45.833 0.00 0.00 36.57 1.85
2202 2436 4.036804 GCAACGCACGGGCAATCA 62.037 61.111 11.77 0.00 41.24 2.57
2203 2437 4.776647 GGCAACGCACGGGCAATC 62.777 66.667 11.77 0.00 41.24 2.67
2217 2451 0.749818 TGTTCTTTTGCTCCGTGGCA 60.750 50.000 0.00 0.00 40.74 4.92
2218 2452 0.317854 GTGTTCTTTTGCTCCGTGGC 60.318 55.000 0.00 0.00 0.00 5.01
2219 2453 1.021202 TGTGTTCTTTTGCTCCGTGG 58.979 50.000 0.00 0.00 0.00 4.94
2220 2454 1.400142 TGTGTGTTCTTTTGCTCCGTG 59.600 47.619 0.00 0.00 0.00 4.94
2221 2455 1.745232 TGTGTGTTCTTTTGCTCCGT 58.255 45.000 0.00 0.00 0.00 4.69
2222 2456 4.685169 ATATGTGTGTTCTTTTGCTCCG 57.315 40.909 0.00 0.00 0.00 4.63
2223 2457 4.622740 GCAATATGTGTGTTCTTTTGCTCC 59.377 41.667 0.00 0.00 36.10 4.70
2224 2458 5.221880 TGCAATATGTGTGTTCTTTTGCTC 58.778 37.500 0.00 0.00 38.91 4.26
2225 2459 5.199024 TGCAATATGTGTGTTCTTTTGCT 57.801 34.783 0.00 0.00 38.91 3.91
2226 2460 5.903764 TTGCAATATGTGTGTTCTTTTGC 57.096 34.783 0.00 0.00 38.68 3.68
2227 2461 8.074474 TCAATTGCAATATGTGTGTTCTTTTG 57.926 30.769 13.39 2.88 0.00 2.44
2228 2462 8.836268 ATCAATTGCAATATGTGTGTTCTTTT 57.164 26.923 13.39 0.00 0.00 2.27
2229 2463 8.714179 CAATCAATTGCAATATGTGTGTTCTTT 58.286 29.630 13.39 0.00 0.00 2.52
2230 2464 8.246908 CAATCAATTGCAATATGTGTGTTCTT 57.753 30.769 13.39 0.95 0.00 2.52
2231 2465 7.821595 CAATCAATTGCAATATGTGTGTTCT 57.178 32.000 13.39 0.00 0.00 3.01
2246 2480 4.052608 TGAGCACACAAAGCAATCAATTG 58.947 39.130 0.00 0.00 40.66 2.32
2247 2481 4.325028 TGAGCACACAAAGCAATCAATT 57.675 36.364 0.00 0.00 0.00 2.32
2248 2482 4.530710 ATGAGCACACAAAGCAATCAAT 57.469 36.364 0.00 0.00 0.00 2.57
2249 2483 4.300803 GAATGAGCACACAAAGCAATCAA 58.699 39.130 0.00 0.00 0.00 2.57
2250 2484 3.609879 CGAATGAGCACACAAAGCAATCA 60.610 43.478 0.00 0.00 0.00 2.57
2251 2485 2.912967 CGAATGAGCACACAAAGCAATC 59.087 45.455 0.00 0.00 0.00 2.67
2252 2486 2.294233 ACGAATGAGCACACAAAGCAAT 59.706 40.909 0.00 0.00 0.00 3.56
2253 2487 1.675483 ACGAATGAGCACACAAAGCAA 59.325 42.857 0.00 0.00 0.00 3.91
2254 2488 1.264020 GACGAATGAGCACACAAAGCA 59.736 47.619 0.00 0.00 0.00 3.91
2255 2489 1.264020 TGACGAATGAGCACACAAAGC 59.736 47.619 0.00 0.00 0.00 3.51
2256 2490 3.548587 CTTGACGAATGAGCACACAAAG 58.451 45.455 0.00 0.00 0.00 2.77
2257 2491 2.286950 GCTTGACGAATGAGCACACAAA 60.287 45.455 0.00 0.00 36.45 2.83
2258 2492 1.264020 GCTTGACGAATGAGCACACAA 59.736 47.619 0.00 0.00 36.45 3.33
2259 2493 0.867746 GCTTGACGAATGAGCACACA 59.132 50.000 0.00 0.00 36.45 3.72
2260 2494 0.867746 TGCTTGACGAATGAGCACAC 59.132 50.000 0.00 0.00 41.15 3.82
2261 2495 3.304041 TGCTTGACGAATGAGCACA 57.696 47.368 0.00 0.00 41.15 4.57
2263 2497 1.264020 GTTGTGCTTGACGAATGAGCA 59.736 47.619 0.00 0.00 43.56 4.26
2264 2498 1.264020 TGTTGTGCTTGACGAATGAGC 59.736 47.619 0.00 0.00 36.95 4.26
2265 2499 3.818961 ATGTTGTGCTTGACGAATGAG 57.181 42.857 0.00 0.00 0.00 2.90
2266 2500 4.694982 ACATATGTTGTGCTTGACGAATGA 59.305 37.500 1.41 0.00 37.11 2.57
2267 2501 4.973396 ACATATGTTGTGCTTGACGAATG 58.027 39.130 1.41 0.00 37.11 2.67
2268 2502 5.064707 GGTACATATGTTGTGCTTGACGAAT 59.935 40.000 14.77 0.00 40.46 3.34
2269 2503 4.390603 GGTACATATGTTGTGCTTGACGAA 59.609 41.667 14.77 0.00 40.46 3.85
2270 2504 3.930229 GGTACATATGTTGTGCTTGACGA 59.070 43.478 14.77 0.00 40.46 4.20
2271 2505 3.682377 TGGTACATATGTTGTGCTTGACG 59.318 43.478 14.77 0.00 40.46 4.35
2272 2506 4.454161 TGTGGTACATATGTTGTGCTTGAC 59.546 41.667 14.77 3.11 44.52 3.18
2273 2507 4.646572 TGTGGTACATATGTTGTGCTTGA 58.353 39.130 14.77 0.00 44.52 3.02
2274 2508 5.369685 TTGTGGTACATATGTTGTGCTTG 57.630 39.130 14.77 0.00 44.52 4.01
2275 2509 6.264292 TCTTTTGTGGTACATATGTTGTGCTT 59.736 34.615 14.77 0.00 44.52 3.91
2276 2510 5.767665 TCTTTTGTGGTACATATGTTGTGCT 59.232 36.000 14.77 0.00 44.52 4.40
2277 2511 6.007936 TCTTTTGTGGTACATATGTTGTGC 57.992 37.500 14.77 3.70 44.52 4.57
2278 2512 7.378461 GTGTTCTTTTGTGGTACATATGTTGTG 59.622 37.037 14.77 0.00 44.52 3.33
2279 2513 7.067615 TGTGTTCTTTTGTGGTACATATGTTGT 59.932 33.333 14.77 0.00 44.52 3.32
2280 2514 7.378461 GTGTGTTCTTTTGTGGTACATATGTTG 59.622 37.037 14.77 0.00 44.52 3.33
2281 2515 7.067615 TGTGTGTTCTTTTGTGGTACATATGTT 59.932 33.333 14.77 0.00 44.52 2.71
2282 2516 6.544197 TGTGTGTTCTTTTGTGGTACATATGT 59.456 34.615 13.93 13.93 44.52 2.29
2283 2517 6.964908 TGTGTGTTCTTTTGTGGTACATATG 58.035 36.000 0.00 0.00 44.52 1.78
2284 2518 7.759489 ATGTGTGTTCTTTTGTGGTACATAT 57.241 32.000 0.00 0.00 44.52 1.78
2285 2519 8.678593 TTATGTGTGTTCTTTTGTGGTACATA 57.321 30.769 0.00 0.00 44.52 2.29
2286 2520 7.575414 TTATGTGTGTTCTTTTGTGGTACAT 57.425 32.000 0.00 0.00 44.52 2.29
2287 2521 7.575414 ATTATGTGTGTTCTTTTGTGGTACA 57.425 32.000 0.00 0.00 0.00 2.90
2290 2524 8.637986 ACATAATTATGTGTGTTCTTTTGTGGT 58.362 29.630 26.51 0.00 44.66 4.16
2300 2534 9.905713 AGGAATGAGTACATAATTATGTGTGTT 57.094 29.630 32.16 21.16 45.77 3.32
2301 2535 9.547753 GAGGAATGAGTACATAATTATGTGTGT 57.452 33.333 32.16 20.01 45.77 3.72
2302 2536 9.546428 TGAGGAATGAGTACATAATTATGTGTG 57.454 33.333 32.16 11.08 45.77 3.82
2305 2539 9.784531 CCTTGAGGAATGAGTACATAATTATGT 57.215 33.333 28.97 28.97 42.83 2.29
2306 2540 9.224267 CCCTTGAGGAATGAGTACATAATTATG 57.776 37.037 21.42 21.42 38.24 1.90
2307 2541 7.885399 GCCCTTGAGGAATGAGTACATAATTAT 59.115 37.037 0.00 0.00 38.24 1.28
2308 2542 7.147391 TGCCCTTGAGGAATGAGTACATAATTA 60.147 37.037 0.00 0.00 38.24 1.40
2309 2543 6.064717 GCCCTTGAGGAATGAGTACATAATT 58.935 40.000 0.00 0.00 38.24 1.40
2310 2544 5.132648 TGCCCTTGAGGAATGAGTACATAAT 59.867 40.000 0.00 0.00 38.24 1.28
2311 2545 4.473196 TGCCCTTGAGGAATGAGTACATAA 59.527 41.667 0.00 0.00 38.24 1.90
2312 2546 4.037222 TGCCCTTGAGGAATGAGTACATA 58.963 43.478 0.00 0.00 38.24 2.29
2313 2547 2.846206 TGCCCTTGAGGAATGAGTACAT 59.154 45.455 0.00 0.00 38.24 2.29
2314 2548 2.265367 TGCCCTTGAGGAATGAGTACA 58.735 47.619 0.00 0.00 38.24 2.90
2315 2549 3.010420 GTTGCCCTTGAGGAATGAGTAC 58.990 50.000 0.00 0.00 38.24 2.73
2316 2550 2.642311 TGTTGCCCTTGAGGAATGAGTA 59.358 45.455 0.00 0.00 38.24 2.59
2317 2551 1.425066 TGTTGCCCTTGAGGAATGAGT 59.575 47.619 0.00 0.00 38.24 3.41
2318 2552 2.205022 TGTTGCCCTTGAGGAATGAG 57.795 50.000 0.00 0.00 38.24 2.90
2319 2553 2.905415 ATGTTGCCCTTGAGGAATGA 57.095 45.000 0.00 0.00 38.24 2.57
2320 2554 3.956199 ACATATGTTGCCCTTGAGGAATG 59.044 43.478 1.41 0.00 38.24 2.67
2321 2555 4.210331 GACATATGTTGCCCTTGAGGAAT 58.790 43.478 10.30 0.00 38.24 3.01
2322 2556 3.620488 GACATATGTTGCCCTTGAGGAA 58.380 45.455 10.30 0.00 38.24 3.36
2323 2557 2.419990 CGACATATGTTGCCCTTGAGGA 60.420 50.000 10.30 0.00 38.24 3.71
2324 2558 1.942657 CGACATATGTTGCCCTTGAGG 59.057 52.381 10.30 0.00 39.47 3.86
2325 2559 2.905075 TCGACATATGTTGCCCTTGAG 58.095 47.619 17.10 0.00 0.00 3.02
2326 2560 3.558931 ATCGACATATGTTGCCCTTGA 57.441 42.857 17.10 0.73 0.00 3.02
2327 2561 3.627123 TGAATCGACATATGTTGCCCTTG 59.373 43.478 17.10 0.00 0.00 3.61
2328 2562 3.884895 TGAATCGACATATGTTGCCCTT 58.115 40.909 17.10 10.59 0.00 3.95
2329 2563 3.558931 TGAATCGACATATGTTGCCCT 57.441 42.857 17.10 4.94 0.00 5.19
2330 2564 4.630894 TTTGAATCGACATATGTTGCCC 57.369 40.909 17.10 9.43 0.00 5.36
2356 2590 1.342174 TGGGTACGAGTGGAAGAACAC 59.658 52.381 0.00 0.00 41.63 3.32
2357 2591 1.707106 TGGGTACGAGTGGAAGAACA 58.293 50.000 0.00 0.00 0.00 3.18
2358 2592 2.028385 ACATGGGTACGAGTGGAAGAAC 60.028 50.000 0.00 0.00 0.00 3.01
2359 2593 2.253610 ACATGGGTACGAGTGGAAGAA 58.746 47.619 0.00 0.00 0.00 2.52
2360 2594 1.933021 ACATGGGTACGAGTGGAAGA 58.067 50.000 0.00 0.00 0.00 2.87
2361 2595 2.346803 CAACATGGGTACGAGTGGAAG 58.653 52.381 0.00 0.00 0.00 3.46
2362 2596 1.609580 GCAACATGGGTACGAGTGGAA 60.610 52.381 0.00 0.00 0.00 3.53
2363 2597 0.036765 GCAACATGGGTACGAGTGGA 60.037 55.000 0.00 0.00 0.00 4.02
2364 2598 0.321210 TGCAACATGGGTACGAGTGG 60.321 55.000 0.00 0.00 0.00 4.00
2365 2599 1.398041 CATGCAACATGGGTACGAGTG 59.602 52.381 0.00 0.00 0.00 3.51
2366 2600 1.277842 TCATGCAACATGGGTACGAGT 59.722 47.619 7.66 0.00 0.00 4.18
2367 2601 2.022764 TCATGCAACATGGGTACGAG 57.977 50.000 7.66 0.00 0.00 4.18
2368 2602 2.481289 TTCATGCAACATGGGTACGA 57.519 45.000 7.66 0.00 0.00 3.43
2369 2603 3.567576 TTTTCATGCAACATGGGTACG 57.432 42.857 7.66 0.00 0.00 3.67
2370 2604 4.183101 CCATTTTCATGCAACATGGGTAC 58.817 43.478 7.66 0.00 32.18 3.34
2371 2605 3.837146 ACCATTTTCATGCAACATGGGTA 59.163 39.130 18.84 0.00 39.06 3.69
2372 2606 2.638855 ACCATTTTCATGCAACATGGGT 59.361 40.909 18.84 4.11 39.06 4.51
2373 2607 3.337694 ACCATTTTCATGCAACATGGG 57.662 42.857 18.84 3.53 39.06 4.00
2374 2608 3.120130 GCAACCATTTTCATGCAACATGG 60.120 43.478 15.62 15.62 40.37 3.66
2375 2609 3.120130 GGCAACCATTTTCATGCAACATG 60.120 43.478 0.00 1.05 40.51 3.21
2376 2610 3.075884 GGCAACCATTTTCATGCAACAT 58.924 40.909 0.00 0.00 40.51 2.71
2377 2611 2.158856 TGGCAACCATTTTCATGCAACA 60.159 40.909 0.00 0.00 40.51 3.33
2378 2612 2.492012 TGGCAACCATTTTCATGCAAC 58.508 42.857 0.00 0.00 40.51 4.17
2379 2613 2.924757 TGGCAACCATTTTCATGCAA 57.075 40.000 0.00 0.00 40.51 4.08
2380 2614 2.924757 TTGGCAACCATTTTCATGCA 57.075 40.000 0.00 0.00 40.51 3.96
2381 2615 5.007921 GGATATTTGGCAACCATTTTCATGC 59.992 40.000 0.00 0.00 38.06 4.06
2382 2616 6.037391 GTGGATATTTGGCAACCATTTTCATG 59.963 38.462 10.10 0.00 31.53 3.07
2383 2617 6.070078 AGTGGATATTTGGCAACCATTTTCAT 60.070 34.615 10.10 0.00 31.53 2.57
2384 2618 5.248020 AGTGGATATTTGGCAACCATTTTCA 59.752 36.000 10.10 0.00 31.53 2.69
2385 2619 5.733676 AGTGGATATTTGGCAACCATTTTC 58.266 37.500 10.10 0.00 31.53 2.29
2386 2620 5.760484 AGTGGATATTTGGCAACCATTTT 57.240 34.783 10.10 0.00 31.53 1.82
2387 2621 5.760484 AAGTGGATATTTGGCAACCATTT 57.240 34.783 10.10 9.42 31.53 2.32
2388 2622 8.725606 ATATAAGTGGATATTTGGCAACCATT 57.274 30.769 10.10 4.01 31.53 3.16
2389 2623 7.397192 GGATATAAGTGGATATTTGGCAACCAT 59.603 37.037 10.10 1.85 31.53 3.55
2390 2624 6.719370 GGATATAAGTGGATATTTGGCAACCA 59.281 38.462 0.00 0.43 0.00 3.67
2391 2625 6.152831 GGGATATAAGTGGATATTTGGCAACC 59.847 42.308 0.00 0.00 0.00 3.77
2392 2626 6.719370 TGGGATATAAGTGGATATTTGGCAAC 59.281 38.462 0.00 0.00 0.00 4.17
2393 2627 6.857848 TGGGATATAAGTGGATATTTGGCAA 58.142 36.000 0.00 0.00 0.00 4.52
2394 2628 6.461577 TGGGATATAAGTGGATATTTGGCA 57.538 37.500 0.00 0.00 0.00 4.92
2395 2629 7.775053 TTTGGGATATAAGTGGATATTTGGC 57.225 36.000 0.00 0.00 0.00 4.52
2396 2630 9.759473 AGATTTGGGATATAAGTGGATATTTGG 57.241 33.333 0.00 0.00 0.00 3.28
2401 2635 9.116080 ACATGAGATTTGGGATATAAGTGGATA 57.884 33.333 0.00 0.00 0.00 2.59
2402 2636 7.993416 ACATGAGATTTGGGATATAAGTGGAT 58.007 34.615 0.00 0.00 0.00 3.41
2403 2637 7.392766 ACATGAGATTTGGGATATAAGTGGA 57.607 36.000 0.00 0.00 0.00 4.02
2404 2638 6.656693 GGACATGAGATTTGGGATATAAGTGG 59.343 42.308 0.00 0.00 0.00 4.00
2405 2639 7.226441 TGGACATGAGATTTGGGATATAAGTG 58.774 38.462 0.00 0.00 0.00 3.16
2406 2640 7.392766 TGGACATGAGATTTGGGATATAAGT 57.607 36.000 0.00 0.00 0.00 2.24
2407 2641 8.874744 ATTGGACATGAGATTTGGGATATAAG 57.125 34.615 0.00 0.00 0.00 1.73
2409 2643 9.739276 GTTATTGGACATGAGATTTGGGATATA 57.261 33.333 0.00 0.00 0.00 0.86
2410 2644 8.226810 TGTTATTGGACATGAGATTTGGGATAT 58.773 33.333 0.00 0.00 0.00 1.63
2411 2645 7.581814 TGTTATTGGACATGAGATTTGGGATA 58.418 34.615 0.00 0.00 0.00 2.59
2412 2646 6.434302 TGTTATTGGACATGAGATTTGGGAT 58.566 36.000 0.00 0.00 0.00 3.85
2413 2647 5.825532 TGTTATTGGACATGAGATTTGGGA 58.174 37.500 0.00 0.00 0.00 4.37
2414 2648 6.548622 AGATGTTATTGGACATGAGATTTGGG 59.451 38.462 0.00 0.00 40.21 4.12
2415 2649 7.578310 AGATGTTATTGGACATGAGATTTGG 57.422 36.000 0.00 0.00 40.21 3.28
2420 2654 9.379770 TCCTATTAGATGTTATTGGACATGAGA 57.620 33.333 0.00 0.00 40.21 3.27
2433 2667 9.614792 GGTGACTTGTATTTCCTATTAGATGTT 57.385 33.333 0.00 0.00 0.00 2.71
2434 2668 8.993424 AGGTGACTTGTATTTCCTATTAGATGT 58.007 33.333 0.00 0.00 37.44 3.06
2435 2669 9.482627 GAGGTGACTTGTATTTCCTATTAGATG 57.517 37.037 0.00 0.00 44.43 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.