Multiple sequence alignment - TraesCS5D01G192300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G192300 chr5D 100.000 7856 0 0 1 7856 295075945 295068090 0.000000e+00 14508.0
1 TraesCS5D01G192300 chr5D 87.448 239 27 3 26 261 344791308 344791070 1.000000e-68 272.0
2 TraesCS5D01G192300 chr5D 92.903 155 10 1 7193 7347 541999021 541998868 2.850000e-54 224.0
3 TraesCS5D01G192300 chr5D 93.333 150 10 0 7200 7349 27097410 27097559 1.030000e-53 222.0
4 TraesCS5D01G192300 chr5A 96.442 6240 159 25 970 7196 388643539 388637350 0.000000e+00 10235.0
5 TraesCS5D01G192300 chr5A 86.984 315 39 1 7405 7719 582953001 582953313 3.490000e-93 353.0
6 TraesCS5D01G192300 chr5A 87.333 300 30 4 323 621 388644125 388643833 3.510000e-88 337.0
7 TraesCS5D01G192300 chr5A 92.105 152 10 2 7197 7347 528271496 528271646 6.180000e-51 213.0
8 TraesCS5D01G192300 chr5B 97.959 3920 61 7 2997 6911 336792270 336788365 0.000000e+00 6778.0
9 TraesCS5D01G192300 chr5B 96.427 2015 53 13 988 2999 336799666 336797668 0.000000e+00 3304.0
10 TraesCS5D01G192300 chr5B 90.457 503 41 7 1 498 336801397 336800897 0.000000e+00 656.0
11 TraesCS5D01G192300 chr5B 93.722 223 14 0 6974 7196 336788346 336788124 1.260000e-87 335.0
12 TraesCS5D01G192300 chr5B 88.686 274 27 4 495 765 336800611 336800339 1.630000e-86 331.0
13 TraesCS5D01G192300 chr5B 87.552 241 27 3 26 263 449204421 449204181 7.770000e-70 276.0
14 TraesCS5D01G192300 chr5B 85.938 64 4 2 901 959 650348537 650348600 6.580000e-06 63.9
15 TraesCS5D01G192300 chr4B 79.954 878 166 10 3314 4186 428201243 428202115 8.600000e-179 638.0
16 TraesCS5D01G192300 chr4B 87.500 312 38 1 7406 7717 665239034 665238724 7.500000e-95 359.0
17 TraesCS5D01G192300 chr4D 79.295 879 170 11 3314 4186 348044504 348045376 8.720000e-169 604.0
18 TraesCS5D01G192300 chr4D 89.542 306 29 1 7406 7708 502727617 502727922 1.240000e-102 385.0
19 TraesCS5D01G192300 chr4D 87.220 313 38 2 7406 7717 72395801 72395490 9.700000e-94 355.0
20 TraesCS5D01G192300 chr4D 81.336 434 81 0 4444 4877 348045672 348046105 3.490000e-93 353.0
21 TraesCS5D01G192300 chr4D 87.866 239 26 3 26 261 294260975 294260737 2.160000e-70 278.0
22 TraesCS5D01G192300 chr3B 88.022 359 33 4 7407 7755 201992828 201992470 4.390000e-112 416.0
23 TraesCS5D01G192300 chr3B 86.441 59 6 1 7349 7407 31064129 31064073 6.580000e-06 63.9
24 TraesCS5D01G192300 chr7D 87.464 351 42 2 7408 7758 130923424 130923076 3.410000e-108 403.0
25 TraesCS5D01G192300 chr7D 88.750 240 24 3 26 262 176959307 176959068 2.770000e-74 291.0
26 TraesCS5D01G192300 chr7D 93.333 105 7 0 7752 7856 421171731 421171627 1.060000e-33 156.0
27 TraesCS5D01G192300 chr7D 92.381 105 8 0 7752 7856 511321800 511321696 4.910000e-32 150.0
28 TraesCS5D01G192300 chr7D 85.000 60 7 1 7349 7408 35248150 35248207 8.510000e-05 60.2
29 TraesCS5D01G192300 chr7D 92.683 41 3 0 7363 7403 156805548 156805588 8.510000e-05 60.2
30 TraesCS5D01G192300 chr7B 85.674 356 38 6 7408 7754 19959290 19958939 5.790000e-96 363.0
31 TraesCS5D01G192300 chr7B 86.111 252 29 6 26 273 161865266 161865515 4.670000e-67 267.0
32 TraesCS5D01G192300 chr7B 85.294 68 4 2 904 966 439502623 439502557 1.830000e-06 65.8
33 TraesCS5D01G192300 chr3D 85.672 335 42 3 7404 7738 369787543 369787871 1.620000e-91 348.0
34 TraesCS5D01G192300 chr3D 100.000 151 0 0 7197 7347 140426303 140426453 6.000000e-71 279.0
35 TraesCS5D01G192300 chr3D 93.333 105 7 0 7752 7856 369788957 369789061 1.060000e-33 156.0
36 TraesCS5D01G192300 chr3D 88.333 60 3 1 904 959 515636188 515636129 1.410000e-07 69.4
37 TraesCS5D01G192300 chr1A 87.013 308 38 2 7412 7719 557198619 557198924 5.840000e-91 346.0
38 TraesCS5D01G192300 chr1A 86.154 65 3 2 904 963 554278590 554278527 1.830000e-06 65.8
39 TraesCS5D01G192300 chr1A 100.000 30 0 0 7363 7392 374142283 374142312 1.000000e-03 56.5
40 TraesCS5D01G192300 chr1B 100.000 152 0 0 7196 7347 424529798 424529949 1.670000e-71 281.0
41 TraesCS5D01G192300 chr2D 87.866 239 26 3 26 261 444861054 444860816 2.160000e-70 278.0
42 TraesCS5D01G192300 chr2D 87.815 238 26 3 27 261 201608148 201607911 7.770000e-70 276.0
43 TraesCS5D01G192300 chr2D 94.231 104 6 0 7753 7856 650331671 650331774 8.160000e-35 159.0
44 TraesCS5D01G192300 chr2B 87.866 239 26 3 26 261 69734327 69734089 2.160000e-70 278.0
45 TraesCS5D01G192300 chr2B 95.238 105 5 0 7752 7856 105698807 105698911 4.880000e-37 167.0
46 TraesCS5D01G192300 chr6D 94.286 105 6 0 7752 7856 452307656 452307760 2.270000e-35 161.0
47 TraesCS5D01G192300 chr6D 90.991 111 6 2 7750 7856 425933769 425933879 6.350000e-31 147.0
48 TraesCS5D01G192300 chr6D 86.885 61 3 1 904 959 144745088 144745028 6.580000e-06 63.9
49 TraesCS5D01G192300 chr6D 89.130 46 5 0 7363 7408 380727504 380727459 3.060000e-04 58.4
50 TraesCS5D01G192300 chr6A 95.098 102 5 0 7755 7856 207791374 207791273 2.270000e-35 161.0
51 TraesCS5D01G192300 chr1D 94.286 105 6 0 7752 7856 220416240 220416344 2.270000e-35 161.0
52 TraesCS5D01G192300 chr2A 85.915 71 4 2 900 965 603735824 603735893 3.930000e-08 71.3
53 TraesCS5D01G192300 chr2A 90.909 44 2 1 7349 7392 637228452 637228411 3.060000e-04 58.4
54 TraesCS5D01G192300 chr7A 84.722 72 6 1 901 967 409259549 409259620 5.090000e-07 67.6
55 TraesCS5D01G192300 chr7A 86.792 53 5 1 7356 7408 35486417 35486467 3.060000e-04 58.4
56 TraesCS5D01G192300 chr4A 85.938 64 4 3 901 959 696211531 696211594 6.580000e-06 63.9
57 TraesCS5D01G192300 chr4A 85.000 60 7 1 7349 7408 690132566 690132623 8.510000e-05 60.2
58 TraesCS5D01G192300 chr3A 84.286 70 6 2 904 968 673100318 673100249 6.580000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G192300 chr5D 295068090 295075945 7855 True 14508.000000 14508 100.000000 1 7856 1 chr5D.!!$R1 7855
1 TraesCS5D01G192300 chr5A 388637350 388644125 6775 True 5286.000000 10235 91.887500 323 7196 2 chr5A.!!$R1 6873
2 TraesCS5D01G192300 chr5B 336788124 336792270 4146 True 3556.500000 6778 95.840500 2997 7196 2 chr5B.!!$R2 4199
3 TraesCS5D01G192300 chr5B 336797668 336801397 3729 True 1430.333333 3304 91.856667 1 2999 3 chr5B.!!$R3 2998
4 TraesCS5D01G192300 chr4B 428201243 428202115 872 False 638.000000 638 79.954000 3314 4186 1 chr4B.!!$F1 872
5 TraesCS5D01G192300 chr4D 348044504 348046105 1601 False 478.500000 604 80.315500 3314 4877 2 chr4D.!!$F2 1563
6 TraesCS5D01G192300 chr3D 369787543 369789061 1518 False 252.000000 348 89.502500 7404 7856 2 chr3D.!!$F2 452

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
251 256 0.040499 GGGGCCAATAAACCAGGACA 59.960 55.000 4.39 0.00 29.65 4.02 F
1753 2597 0.536687 CGCGGGTCAGGTAGGATCTA 60.537 60.000 0.00 0.00 0.00 1.98 F
2162 3010 0.608035 TTGTCGGCTGGAATGGAACC 60.608 55.000 0.00 0.00 0.00 3.62 F
2593 3441 1.065358 CATTTTGCTCTTGCGCCAAG 58.935 50.000 4.18 9.13 42.25 3.61 F
2622 3470 1.204146 ATAAGCCTCCTCTTTCGCCA 58.796 50.000 0.00 0.00 0.00 5.69 F
2968 3818 3.095102 TCGTGAACATGTGAACCGTTA 57.905 42.857 0.00 0.00 0.00 3.18 F
4482 5370 2.543012 AGCAGATTCAAAGCGATCATCG 59.457 45.455 1.50 1.50 43.89 3.84 F
6171 7060 1.234615 GGCCTCTGCGTGCTTTTACA 61.235 55.000 0.00 0.00 38.85 2.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1757 2601 0.385473 CGCTAACAACCGCAACCAAG 60.385 55.000 0.00 0.00 0.00 3.61 R
2950 3800 3.310227 TGTGTAACGGTTCACATGTTCAC 59.690 43.478 9.02 0.00 42.39 3.18 R
3231 4081 6.644347 AGTTCTACATGACTACAGAAATGGG 58.356 40.000 0.00 0.00 0.00 4.00 R
4268 5119 0.392060 CACTAGCATGAGCAGTGCCA 60.392 55.000 12.58 10.16 45.49 4.92 R
4482 5370 2.259014 TAACTGGGGTAGGGTTCCTC 57.741 55.000 0.00 0.00 34.61 3.71 R
4722 5610 7.549134 ACAGAATCTTCGACAGCAATATTAACA 59.451 33.333 0.00 0.00 0.00 2.41 R
6282 7171 0.106967 GGAGGGGCAGGACATTCTTC 60.107 60.000 0.00 0.00 0.00 2.87 R
7275 8181 0.036105 AATCAGCTCGTCCATGCACA 60.036 50.000 0.00 0.00 0.00 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 40 7.180408 ACCACAAATACAATACTACCTCTGTCT 59.820 37.037 0.00 0.00 0.00 3.41
46 48 7.384477 ACAATACTACCTCTGTCTTGGTTTAC 58.616 38.462 0.00 0.00 37.74 2.01
48 50 5.470047 ACTACCTCTGTCTTGGTTTACTG 57.530 43.478 0.00 0.00 37.74 2.74
49 51 3.771577 ACCTCTGTCTTGGTTTACTGG 57.228 47.619 0.00 0.00 31.62 4.00
58 60 3.917629 TCTTGGTTTACTGGTCCCCATAA 59.082 43.478 0.00 0.00 30.82 1.90
68 70 4.649218 ACTGGTCCCCATAATATTTTGTGC 59.351 41.667 5.36 0.00 30.82 4.57
158 162 9.834628 GAAAACTATGTTCAAATACGAATCCAA 57.165 29.630 0.00 0.00 0.00 3.53
159 163 9.840427 AAAACTATGTTCAAATACGAATCCAAG 57.160 29.630 0.00 0.00 0.00 3.61
235 240 1.974236 TGGCACAAAATACAAAGGGGG 59.026 47.619 0.00 0.00 31.92 5.40
251 256 0.040499 GGGGCCAATAAACCAGGACA 59.960 55.000 4.39 0.00 29.65 4.02
252 257 1.342975 GGGGCCAATAAACCAGGACAT 60.343 52.381 4.39 0.00 29.65 3.06
253 258 2.091555 GGGGCCAATAAACCAGGACATA 60.092 50.000 4.39 0.00 29.65 2.29
263 268 5.934402 AAACCAGGACATAGGTAGTACAG 57.066 43.478 2.06 0.00 37.07 2.74
266 271 5.444176 ACCAGGACATAGGTAGTACAGTAC 58.556 45.833 2.05 2.05 36.07 2.73
283 288 3.004629 CAGTACAAGCCAATGCAGACAAA 59.995 43.478 0.00 0.00 41.13 2.83
418 424 4.020751 GGCTAATATGTCTCAGATGCTCCA 60.021 45.833 0.00 0.00 0.00 3.86
436 442 4.710324 CTCCACTGGTTTGTAACACCTTA 58.290 43.478 0.00 0.00 35.07 2.69
581 877 5.875359 TGCCACACGACATATTTATAACACA 59.125 36.000 0.00 0.00 0.00 3.72
657 954 9.077885 TGGATTATAGGGAAAGTAAATGCAATC 57.922 33.333 0.00 0.00 0.00 2.67
708 1005 5.254115 GTCCAACTTTATTACTGAGCCCTT 58.746 41.667 0.00 0.00 0.00 3.95
777 1485 5.785243 TCGTACACTTATGGTTCACATGAA 58.215 37.500 0.00 0.00 40.82 2.57
796 1567 8.022550 CACATGAATGCACAGAGTAATTGTAAA 58.977 33.333 0.00 0.00 0.00 2.01
888 1721 9.946165 AATTTTCAAAGTTACACAGCTTACTAC 57.054 29.630 0.00 0.00 0.00 2.73
889 1722 8.726870 TTTTCAAAGTTACACAGCTTACTACT 57.273 30.769 0.00 0.00 0.00 2.57
890 1723 9.820725 TTTTCAAAGTTACACAGCTTACTACTA 57.179 29.630 0.00 0.00 0.00 1.82
891 1724 8.807667 TTCAAAGTTACACAGCTTACTACTAC 57.192 34.615 0.00 0.00 0.00 2.73
892 1725 8.174733 TCAAAGTTACACAGCTTACTACTACT 57.825 34.615 0.00 0.00 0.00 2.57
894 1727 6.756299 AGTTACACAGCTTACTACTACTCC 57.244 41.667 0.00 0.00 0.00 3.85
895 1728 5.651576 AGTTACACAGCTTACTACTACTCCC 59.348 44.000 0.00 0.00 0.00 4.30
896 1729 4.319037 ACACAGCTTACTACTACTCCCT 57.681 45.455 0.00 0.00 0.00 4.20
897 1730 4.271661 ACACAGCTTACTACTACTCCCTC 58.728 47.826 0.00 0.00 0.00 4.30
898 1731 3.633065 CACAGCTTACTACTACTCCCTCC 59.367 52.174 0.00 0.00 0.00 4.30
899 1732 2.879646 CAGCTTACTACTACTCCCTCCG 59.120 54.545 0.00 0.00 0.00 4.63
900 1733 2.509131 AGCTTACTACTACTCCCTCCGT 59.491 50.000 0.00 0.00 0.00 4.69
901 1734 3.713764 AGCTTACTACTACTCCCTCCGTA 59.286 47.826 0.00 0.00 0.00 4.02
902 1735 4.064388 GCTTACTACTACTCCCTCCGTAG 58.936 52.174 0.00 0.00 40.07 3.51
921 1754 6.219302 CGTAGGAACGTTTTTGACAATAGT 57.781 37.500 0.46 0.00 44.21 2.12
922 1755 6.068931 CGTAGGAACGTTTTTGACAATAGTG 58.931 40.000 0.46 0.00 44.21 2.74
923 1756 6.292488 CGTAGGAACGTTTTTGACAATAGTGT 60.292 38.462 0.46 0.00 44.21 3.55
924 1757 7.096106 CGTAGGAACGTTTTTGACAATAGTGTA 60.096 37.037 0.46 0.00 44.21 2.90
925 1758 7.556733 AGGAACGTTTTTGACAATAGTGTAA 57.443 32.000 0.46 0.00 38.41 2.41
926 1759 7.987649 AGGAACGTTTTTGACAATAGTGTAAA 58.012 30.769 0.46 0.00 38.41 2.01
927 1760 8.460428 AGGAACGTTTTTGACAATAGTGTAAAA 58.540 29.630 0.46 1.61 38.41 1.52
928 1761 9.074443 GGAACGTTTTTGACAATAGTGTAAAAA 57.926 29.630 13.34 13.34 43.52 1.94
952 1785 9.855021 AAAACGTTCTTATATTTTGGGATTGAG 57.145 29.630 0.00 0.00 0.00 3.02
953 1786 7.568199 ACGTTCTTATATTTTGGGATTGAGG 57.432 36.000 0.00 0.00 0.00 3.86
954 1787 7.116736 ACGTTCTTATATTTTGGGATTGAGGT 58.883 34.615 0.00 0.00 0.00 3.85
955 1788 8.269317 ACGTTCTTATATTTTGGGATTGAGGTA 58.731 33.333 0.00 0.00 0.00 3.08
956 1789 8.774586 CGTTCTTATATTTTGGGATTGAGGTAG 58.225 37.037 0.00 0.00 0.00 3.18
957 1790 9.628500 GTTCTTATATTTTGGGATTGAGGTAGT 57.372 33.333 0.00 0.00 0.00 2.73
963 1796 9.990868 ATATTTTGGGATTGAGGTAGTAACTTT 57.009 29.630 0.00 0.00 0.00 2.66
964 1797 8.721133 ATTTTGGGATTGAGGTAGTAACTTTT 57.279 30.769 0.00 0.00 0.00 2.27
965 1798 8.541899 TTTTGGGATTGAGGTAGTAACTTTTT 57.458 30.769 0.00 0.00 0.00 1.94
966 1799 7.519032 TTGGGATTGAGGTAGTAACTTTTTG 57.481 36.000 0.00 0.00 0.00 2.44
967 1800 6.607019 TGGGATTGAGGTAGTAACTTTTTGT 58.393 36.000 0.00 0.00 0.00 2.83
968 1801 6.488683 TGGGATTGAGGTAGTAACTTTTTGTG 59.511 38.462 0.00 0.00 0.00 3.33
977 1810 7.441458 AGGTAGTAACTTTTTGTGACAGCTTAG 59.559 37.037 0.00 0.00 32.29 2.18
986 1821 7.941795 TTTTGTGACAGCTTAGTACTAACTC 57.058 36.000 11.38 6.63 37.15 3.01
1048 1884 2.601240 TCTTGCAATTCACCATGGGA 57.399 45.000 18.09 7.80 0.00 4.37
1130 1966 0.914417 CATACACACCCCCACCTCCT 60.914 60.000 0.00 0.00 0.00 3.69
1131 1967 0.620700 ATACACACCCCCACCTCCTC 60.621 60.000 0.00 0.00 0.00 3.71
1133 1969 3.542602 ACACCCCCACCTCCTCCT 61.543 66.667 0.00 0.00 0.00 3.69
1144 1980 3.023832 CACCTCCTCCTCTTTCTCTCTC 58.976 54.545 0.00 0.00 0.00 3.20
1145 1981 2.024369 ACCTCCTCCTCTTTCTCTCTCC 60.024 54.545 0.00 0.00 0.00 3.71
1146 1982 2.666317 CTCCTCCTCTTTCTCTCTCCC 58.334 57.143 0.00 0.00 0.00 4.30
1176 2012 3.397482 CAGCTAGAGAGAGAGAGAGAGC 58.603 54.545 0.00 0.00 0.00 4.09
1177 2013 2.036475 AGCTAGAGAGAGAGAGAGAGCG 59.964 54.545 0.00 0.00 33.91 5.03
1178 2014 2.035961 GCTAGAGAGAGAGAGAGAGCGA 59.964 54.545 0.00 0.00 0.00 4.93
1179 2015 2.898729 AGAGAGAGAGAGAGAGCGAG 57.101 55.000 0.00 0.00 0.00 5.03
1753 2597 0.536687 CGCGGGTCAGGTAGGATCTA 60.537 60.000 0.00 0.00 0.00 1.98
1755 2599 1.546476 GCGGGTCAGGTAGGATCTATG 59.454 57.143 0.00 0.00 0.00 2.23
1757 2601 2.820787 CGGGTCAGGTAGGATCTATGAC 59.179 54.545 0.00 0.76 39.59 3.06
1900 2744 4.643387 GGGTGGGTTCAGCGTGCT 62.643 66.667 0.00 0.00 41.92 4.40
1953 2800 7.271511 TCGTTTTGGTTCTAGTTTGGTTAGTA 58.728 34.615 0.00 0.00 0.00 1.82
2161 3009 1.463674 ATTGTCGGCTGGAATGGAAC 58.536 50.000 0.00 0.00 0.00 3.62
2162 3010 0.608035 TTGTCGGCTGGAATGGAACC 60.608 55.000 0.00 0.00 0.00 3.62
2341 3189 6.219537 AGGGGAGGAAATGGGAAAATATAG 57.780 41.667 0.00 0.00 0.00 1.31
2475 3323 9.204570 GAACTTCTAACAACTTGCTGAACTATA 57.795 33.333 0.00 0.00 0.00 1.31
2500 3348 4.392921 TGCTTTTAGAAGATCGAGGGAG 57.607 45.455 0.00 0.00 34.71 4.30
2530 3378 4.351874 TGGGGTGAGCTATTACTTATGC 57.648 45.455 0.00 0.00 0.00 3.14
2593 3441 1.065358 CATTTTGCTCTTGCGCCAAG 58.935 50.000 4.18 9.13 42.25 3.61
2622 3470 1.204146 ATAAGCCTCCTCTTTCGCCA 58.796 50.000 0.00 0.00 0.00 5.69
2675 3523 4.816385 ACTCACGACAATGAATTTGACTGT 59.184 37.500 0.00 0.00 38.76 3.55
2676 3524 5.094429 TCACGACAATGAATTTGACTGTG 57.906 39.130 0.00 0.00 38.76 3.66
2737 3585 5.189934 AGGATTTGTGGAGGAGTAGGTTAAG 59.810 44.000 0.00 0.00 0.00 1.85
2869 3718 4.529897 TCTGGCAATGCATTCATCTTAGT 58.470 39.130 9.53 0.00 31.27 2.24
2870 3719 4.951715 TCTGGCAATGCATTCATCTTAGTT 59.048 37.500 9.53 0.00 31.27 2.24
2968 3818 3.095102 TCGTGAACATGTGAACCGTTA 57.905 42.857 0.00 0.00 0.00 3.18
3138 3988 4.431809 CTGCTTCACATTCCTGTAGAGAG 58.568 47.826 0.00 0.00 33.14 3.20
3147 3997 8.593679 TCACATTCCTGTAGAGAGTAAATTCAA 58.406 33.333 0.00 0.00 33.14 2.69
3208 4058 6.884295 TGTTTTGATGGTCCTACTAAATCCAG 59.116 38.462 0.00 0.00 0.00 3.86
3756 4606 4.391523 GTGATTGAGCTCTTGAAGAAGACC 59.608 45.833 16.19 0.00 34.36 3.85
4192 5043 4.706842 TTTGCTCAAGTAAGTCCCTTCT 57.293 40.909 0.00 0.00 0.00 2.85
4360 5211 5.107375 CCAAGAAATCATTTTGCTGAAACCG 60.107 40.000 0.00 0.00 0.00 4.44
4482 5370 2.543012 AGCAGATTCAAAGCGATCATCG 59.457 45.455 1.50 1.50 43.89 3.84
4722 5610 7.667219 TCTGCAGACAAATTAGAAAAGGATCTT 59.333 33.333 13.74 0.00 0.00 2.40
5002 5891 7.761409 TGTTATGGCTTGCAAGATTAAGTTAG 58.239 34.615 30.39 0.00 0.00 2.34
5152 6041 8.849168 CAAACCCAAGCAATATATTGACTCATA 58.151 33.333 26.22 0.00 40.14 2.15
5568 6457 3.820467 TGGTGTTTGGATGCTGAGTAAAG 59.180 43.478 0.00 0.00 0.00 1.85
5793 6682 1.333931 CAGTACATCCGAAGCGAGCTA 59.666 52.381 0.00 0.00 0.00 3.32
6171 7060 1.234615 GGCCTCTGCGTGCTTTTACA 61.235 55.000 0.00 0.00 38.85 2.41
6231 7120 1.622811 CTCAGAGACCTGTTTCTGGCT 59.377 52.381 15.38 0.00 40.85 4.75
6237 7126 1.672356 CCTGTTTCTGGCTGACGGG 60.672 63.158 0.00 0.00 33.82 5.28
6282 7171 3.322466 AAGGCGTCCTCCCAGGTG 61.322 66.667 0.00 0.00 36.53 4.00
6312 7201 0.970937 TGCCCCTCCTACGAACAGAG 60.971 60.000 0.00 0.00 0.00 3.35
6354 7243 1.428448 TCAAACGACTGATTGCCGAG 58.572 50.000 0.00 0.00 0.00 4.63
6878 7770 9.509855 GTGAATAAGTTATGTGTTTTGTGTTGA 57.490 29.630 0.00 0.00 0.00 3.18
6952 7844 3.003171 GCGTTTTGGCATTTCATTGGTTT 59.997 39.130 0.00 0.00 0.00 3.27
6953 7845 4.525686 CGTTTTGGCATTTCATTGGTTTG 58.474 39.130 0.00 0.00 0.00 2.93
6955 7847 5.448360 CGTTTTGGCATTTCATTGGTTTGTT 60.448 36.000 0.00 0.00 0.00 2.83
6957 7849 3.474600 TGGCATTTCATTGGTTTGTTGG 58.525 40.909 0.00 0.00 0.00 3.77
6958 7850 2.226200 GGCATTTCATTGGTTTGTTGGC 59.774 45.455 0.00 0.00 0.00 4.52
6959 7851 3.140623 GCATTTCATTGGTTTGTTGGCT 58.859 40.909 0.00 0.00 0.00 4.75
6960 7852 3.187022 GCATTTCATTGGTTTGTTGGCTC 59.813 43.478 0.00 0.00 0.00 4.70
6961 7853 3.467374 TTTCATTGGTTTGTTGGCTCC 57.533 42.857 0.00 0.00 0.00 4.70
6962 7854 2.380064 TCATTGGTTTGTTGGCTCCT 57.620 45.000 0.00 0.00 0.00 3.69
6963 7855 2.238521 TCATTGGTTTGTTGGCTCCTC 58.761 47.619 0.00 0.00 0.00 3.71
6964 7856 1.068333 CATTGGTTTGTTGGCTCCTCG 60.068 52.381 0.00 0.00 0.00 4.63
6965 7857 1.452145 TTGGTTTGTTGGCTCCTCGC 61.452 55.000 0.00 0.00 38.13 5.03
6966 7858 1.600916 GGTTTGTTGGCTCCTCGCT 60.601 57.895 0.00 0.00 39.13 4.93
6967 7859 1.578206 GGTTTGTTGGCTCCTCGCTC 61.578 60.000 0.00 0.00 39.13 5.03
6968 7860 0.603975 GTTTGTTGGCTCCTCGCTCT 60.604 55.000 0.00 0.00 39.13 4.09
6969 7861 0.320771 TTTGTTGGCTCCTCGCTCTC 60.321 55.000 0.00 0.00 39.13 3.20
6970 7862 2.172483 TTGTTGGCTCCTCGCTCTCC 62.172 60.000 0.00 0.00 39.13 3.71
6971 7863 2.038007 TTGGCTCCTCGCTCTCCT 59.962 61.111 0.00 0.00 39.13 3.69
6972 7864 2.354401 TTGGCTCCTCGCTCTCCTG 61.354 63.158 0.00 0.00 39.13 3.86
7013 7919 5.488341 TGTAGATGTTCTTGGTTAAGGAGC 58.512 41.667 0.00 0.00 34.59 4.70
7017 7923 2.160205 GTTCTTGGTTAAGGAGCACCC 58.840 52.381 0.00 0.00 35.04 4.61
7061 7967 2.103263 GGGCAGTACTATCAGGGTTCAG 59.897 54.545 0.00 0.00 0.00 3.02
7105 8011 4.702131 GGTGCCTCATAATGGTGGAATATC 59.298 45.833 0.00 0.00 0.00 1.63
7162 8068 0.528901 TGTCCGTGGTGACTTTGTCG 60.529 55.000 0.00 0.00 34.95 4.35
7172 8078 3.923461 GGTGACTTTGTCGATCTCAAGAG 59.077 47.826 0.00 0.00 34.95 2.85
7190 8096 7.554835 TCTCAAGAGTTGTTGGCTTAGTTTTTA 59.445 33.333 0.00 0.00 0.00 1.52
7196 8102 5.385509 TGTTGGCTTAGTTTTTAGGATGC 57.614 39.130 0.00 0.00 0.00 3.91
7197 8103 4.083003 TGTTGGCTTAGTTTTTAGGATGCG 60.083 41.667 0.00 0.00 0.00 4.73
7198 8104 3.945346 TGGCTTAGTTTTTAGGATGCGA 58.055 40.909 0.00 0.00 0.00 5.10
7199 8105 4.328536 TGGCTTAGTTTTTAGGATGCGAA 58.671 39.130 0.00 0.00 0.00 4.70
7200 8106 4.762765 TGGCTTAGTTTTTAGGATGCGAAA 59.237 37.500 0.00 0.00 0.00 3.46
7201 8107 5.093457 GGCTTAGTTTTTAGGATGCGAAAC 58.907 41.667 0.00 0.00 33.39 2.78
7202 8108 5.106277 GGCTTAGTTTTTAGGATGCGAAACT 60.106 40.000 16.08 16.08 42.86 2.66
7203 8109 6.093082 GGCTTAGTTTTTAGGATGCGAAACTA 59.907 38.462 14.66 14.66 41.22 2.24
7204 8110 6.959871 GCTTAGTTTTTAGGATGCGAAACTAC 59.040 38.462 16.81 8.65 41.58 2.73
7205 8111 7.148457 GCTTAGTTTTTAGGATGCGAAACTACT 60.148 37.037 16.81 13.51 41.58 2.57
7206 8112 9.362539 CTTAGTTTTTAGGATGCGAAACTACTA 57.637 33.333 16.81 12.81 41.58 1.82
7207 8113 9.880157 TTAGTTTTTAGGATGCGAAACTACTAT 57.120 29.630 16.81 2.60 41.58 2.12
7208 8114 8.197988 AGTTTTTAGGATGCGAAACTACTATG 57.802 34.615 12.24 0.00 39.72 2.23
7209 8115 6.598753 TTTTAGGATGCGAAACTACTATGC 57.401 37.500 0.00 0.00 0.00 3.14
7210 8116 3.819564 AGGATGCGAAACTACTATGCA 57.180 42.857 0.00 0.00 40.23 3.96
7211 8117 3.722147 AGGATGCGAAACTACTATGCAG 58.278 45.455 0.00 0.00 39.17 4.41
7212 8118 3.384789 AGGATGCGAAACTACTATGCAGA 59.615 43.478 0.00 0.00 39.17 4.26
7213 8119 3.491267 GGATGCGAAACTACTATGCAGAC 59.509 47.826 0.00 0.00 39.17 3.51
7214 8120 2.526077 TGCGAAACTACTATGCAGACG 58.474 47.619 0.00 0.00 0.00 4.18
7215 8121 2.162809 TGCGAAACTACTATGCAGACGA 59.837 45.455 0.00 0.00 0.00 4.20
7216 8122 3.176708 GCGAAACTACTATGCAGACGAA 58.823 45.455 0.00 0.00 0.00 3.85
7217 8123 3.611113 GCGAAACTACTATGCAGACGAAA 59.389 43.478 0.00 0.00 0.00 3.46
7218 8124 4.259451 GCGAAACTACTATGCAGACGAAAG 60.259 45.833 0.00 0.00 0.00 2.62
7229 8135 3.134879 ACGAAAGTCCCTGCACGA 58.865 55.556 0.00 0.00 44.19 4.35
7230 8136 1.671742 ACGAAAGTCCCTGCACGAT 59.328 52.632 0.00 0.00 44.19 3.73
7231 8137 0.389948 ACGAAAGTCCCTGCACGATC 60.390 55.000 0.00 0.00 44.19 3.69
7232 8138 0.389817 CGAAAGTCCCTGCACGATCA 60.390 55.000 0.00 0.00 0.00 2.92
7233 8139 1.363744 GAAAGTCCCTGCACGATCAG 58.636 55.000 0.00 0.00 0.00 2.90
7239 8145 3.786101 CTGCACGATCAGGGAACG 58.214 61.111 0.00 0.00 34.15 3.95
7240 8146 1.215382 CTGCACGATCAGGGAACGA 59.785 57.895 2.91 0.00 32.39 3.85
7241 8147 1.078759 CTGCACGATCAGGGAACGAC 61.079 60.000 2.91 0.00 32.39 4.34
7242 8148 1.080093 GCACGATCAGGGAACGACA 60.080 57.895 2.91 0.00 32.39 4.35
7243 8149 1.078759 GCACGATCAGGGAACGACAG 61.079 60.000 2.91 0.00 32.39 3.51
7244 8150 1.078759 CACGATCAGGGAACGACAGC 61.079 60.000 2.91 0.00 32.39 4.40
7245 8151 1.519455 CGATCAGGGAACGACAGCC 60.519 63.158 0.00 0.00 29.49 4.85
7246 8152 1.596934 GATCAGGGAACGACAGCCA 59.403 57.895 0.00 0.00 0.00 4.75
7247 8153 0.036388 GATCAGGGAACGACAGCCAA 60.036 55.000 0.00 0.00 0.00 4.52
7248 8154 0.400213 ATCAGGGAACGACAGCCAAA 59.600 50.000 0.00 0.00 0.00 3.28
7249 8155 0.400213 TCAGGGAACGACAGCCAAAT 59.600 50.000 0.00 0.00 0.00 2.32
7250 8156 0.804989 CAGGGAACGACAGCCAAATC 59.195 55.000 0.00 0.00 0.00 2.17
7251 8157 0.322546 AGGGAACGACAGCCAAATCC 60.323 55.000 0.00 0.00 0.00 3.01
7252 8158 0.608035 GGGAACGACAGCCAAATCCA 60.608 55.000 0.00 0.00 0.00 3.41
7253 8159 0.804989 GGAACGACAGCCAAATCCAG 59.195 55.000 0.00 0.00 0.00 3.86
7254 8160 0.169009 GAACGACAGCCAAATCCAGC 59.831 55.000 0.00 0.00 0.00 4.85
7255 8161 1.244019 AACGACAGCCAAATCCAGCC 61.244 55.000 0.00 0.00 0.00 4.85
7256 8162 2.753966 CGACAGCCAAATCCAGCCG 61.754 63.158 0.00 0.00 0.00 5.52
7257 8163 1.675641 GACAGCCAAATCCAGCCGT 60.676 57.895 0.00 0.00 0.00 5.68
7258 8164 1.648467 GACAGCCAAATCCAGCCGTC 61.648 60.000 0.00 0.00 29.96 4.79
7259 8165 1.377725 CAGCCAAATCCAGCCGTCT 60.378 57.895 0.00 0.00 0.00 4.18
7260 8166 0.107703 CAGCCAAATCCAGCCGTCTA 60.108 55.000 0.00 0.00 0.00 2.59
7261 8167 0.107654 AGCCAAATCCAGCCGTCTAC 60.108 55.000 0.00 0.00 0.00 2.59
7262 8168 0.107654 GCCAAATCCAGCCGTCTACT 60.108 55.000 0.00 0.00 0.00 2.57
7263 8169 1.679032 GCCAAATCCAGCCGTCTACTT 60.679 52.381 0.00 0.00 0.00 2.24
7264 8170 2.280628 CCAAATCCAGCCGTCTACTTC 58.719 52.381 0.00 0.00 0.00 3.01
7265 8171 2.354704 CCAAATCCAGCCGTCTACTTCA 60.355 50.000 0.00 0.00 0.00 3.02
7266 8172 3.535561 CAAATCCAGCCGTCTACTTCAT 58.464 45.455 0.00 0.00 0.00 2.57
7267 8173 3.914426 AATCCAGCCGTCTACTTCATT 57.086 42.857 0.00 0.00 0.00 2.57
7268 8174 3.914426 ATCCAGCCGTCTACTTCATTT 57.086 42.857 0.00 0.00 0.00 2.32
7269 8175 3.247006 TCCAGCCGTCTACTTCATTTC 57.753 47.619 0.00 0.00 0.00 2.17
7270 8176 2.565391 TCCAGCCGTCTACTTCATTTCA 59.435 45.455 0.00 0.00 0.00 2.69
7271 8177 2.932614 CCAGCCGTCTACTTCATTTCAG 59.067 50.000 0.00 0.00 0.00 3.02
7272 8178 3.589988 CAGCCGTCTACTTCATTTCAGT 58.410 45.455 0.00 0.00 0.00 3.41
7273 8179 3.369147 CAGCCGTCTACTTCATTTCAGTG 59.631 47.826 0.00 0.00 0.00 3.66
7274 8180 2.094417 GCCGTCTACTTCATTTCAGTGC 59.906 50.000 0.00 0.00 0.00 4.40
7275 8181 3.589988 CCGTCTACTTCATTTCAGTGCT 58.410 45.455 0.00 0.00 0.00 4.40
7276 8182 3.369147 CCGTCTACTTCATTTCAGTGCTG 59.631 47.826 0.00 0.00 0.00 4.41
7277 8183 3.990469 CGTCTACTTCATTTCAGTGCTGT 59.010 43.478 0.00 0.00 0.00 4.40
7278 8184 4.143242 CGTCTACTTCATTTCAGTGCTGTG 60.143 45.833 0.00 0.00 0.00 3.66
7279 8185 3.748048 TCTACTTCATTTCAGTGCTGTGC 59.252 43.478 0.00 0.00 0.00 4.57
7280 8186 2.300433 ACTTCATTTCAGTGCTGTGCA 58.700 42.857 0.00 0.00 35.60 4.57
7281 8187 2.889045 ACTTCATTTCAGTGCTGTGCAT 59.111 40.909 0.00 0.00 41.91 3.96
7282 8188 3.242518 CTTCATTTCAGTGCTGTGCATG 58.757 45.455 0.00 0.00 41.91 4.06
7283 8189 1.542472 TCATTTCAGTGCTGTGCATGG 59.458 47.619 0.00 0.00 41.91 3.66
7284 8190 1.542472 CATTTCAGTGCTGTGCATGGA 59.458 47.619 0.00 0.00 41.91 3.41
7285 8191 0.953727 TTTCAGTGCTGTGCATGGAC 59.046 50.000 10.90 10.90 41.91 4.02
7286 8192 1.229975 TTCAGTGCTGTGCATGGACG 61.230 55.000 13.03 8.64 41.91 4.79
7287 8193 1.668793 CAGTGCTGTGCATGGACGA 60.669 57.895 13.03 1.36 41.91 4.20
7288 8194 1.375140 AGTGCTGTGCATGGACGAG 60.375 57.895 13.03 11.75 41.91 4.18
7289 8195 2.743538 TGCTGTGCATGGACGAGC 60.744 61.111 24.37 24.37 31.71 5.03
7290 8196 2.435586 GCTGTGCATGGACGAGCT 60.436 61.111 24.07 0.00 0.00 4.09
7291 8197 2.747822 GCTGTGCATGGACGAGCTG 61.748 63.158 24.07 10.47 0.00 4.24
7292 8198 1.079612 CTGTGCATGGACGAGCTGA 60.080 57.895 13.03 0.00 0.00 4.26
7293 8199 0.461516 CTGTGCATGGACGAGCTGAT 60.462 55.000 13.03 0.00 0.00 2.90
7294 8200 0.036105 TGTGCATGGACGAGCTGATT 60.036 50.000 13.03 0.00 0.00 2.57
7295 8201 1.089920 GTGCATGGACGAGCTGATTT 58.910 50.000 0.10 0.00 0.00 2.17
7296 8202 1.089112 TGCATGGACGAGCTGATTTG 58.911 50.000 0.00 0.00 0.00 2.32
7297 8203 0.248377 GCATGGACGAGCTGATTTGC 60.248 55.000 0.00 0.00 0.00 3.68
7298 8204 1.089112 CATGGACGAGCTGATTTGCA 58.911 50.000 0.00 0.00 34.99 4.08
7299 8205 1.674441 CATGGACGAGCTGATTTGCAT 59.326 47.619 0.00 0.00 34.99 3.96
7300 8206 1.825090 TGGACGAGCTGATTTGCATT 58.175 45.000 0.00 0.00 34.99 3.56
7301 8207 1.469703 TGGACGAGCTGATTTGCATTG 59.530 47.619 0.00 0.00 34.99 2.82
7302 8208 1.470098 GGACGAGCTGATTTGCATTGT 59.530 47.619 0.00 0.00 34.99 2.71
7303 8209 2.476854 GGACGAGCTGATTTGCATTGTC 60.477 50.000 0.00 0.00 34.99 3.18
7304 8210 1.129251 ACGAGCTGATTTGCATTGTCG 59.871 47.619 0.00 0.00 34.99 4.35
7305 8211 1.129251 CGAGCTGATTTGCATTGTCGT 59.871 47.619 0.00 0.00 34.99 4.34
7306 8212 2.413239 CGAGCTGATTTGCATTGTCGTT 60.413 45.455 0.00 0.00 34.99 3.85
7307 8213 3.166657 GAGCTGATTTGCATTGTCGTTC 58.833 45.455 0.00 0.00 34.99 3.95
7308 8214 2.553602 AGCTGATTTGCATTGTCGTTCA 59.446 40.909 0.00 0.00 34.99 3.18
7309 8215 2.658325 GCTGATTTGCATTGTCGTTCAC 59.342 45.455 0.00 0.00 0.00 3.18
7310 8216 3.852939 GCTGATTTGCATTGTCGTTCACA 60.853 43.478 0.00 0.00 0.00 3.58
7311 8217 4.478699 CTGATTTGCATTGTCGTTCACAT 58.521 39.130 0.00 0.00 33.90 3.21
7312 8218 5.619625 TGATTTGCATTGTCGTTCACATA 57.380 34.783 0.00 0.00 33.90 2.29
7313 8219 6.193514 TGATTTGCATTGTCGTTCACATAT 57.806 33.333 0.00 0.00 33.90 1.78
7314 8220 6.257423 TGATTTGCATTGTCGTTCACATATC 58.743 36.000 0.00 0.00 33.90 1.63
7315 8221 3.923827 TGCATTGTCGTTCACATATCG 57.076 42.857 0.00 0.00 33.90 2.92
7316 8222 3.258228 TGCATTGTCGTTCACATATCGT 58.742 40.909 0.00 0.00 33.90 3.73
7317 8223 3.305897 TGCATTGTCGTTCACATATCGTC 59.694 43.478 0.00 0.00 33.90 4.20
7318 8224 3.302480 GCATTGTCGTTCACATATCGTCC 60.302 47.826 0.00 0.00 33.90 4.79
7319 8225 3.579335 TTGTCGTTCACATATCGTCCA 57.421 42.857 0.00 0.00 33.90 4.02
7320 8226 2.871133 TGTCGTTCACATATCGTCCAC 58.129 47.619 0.00 0.00 0.00 4.02
7321 8227 2.229302 TGTCGTTCACATATCGTCCACA 59.771 45.455 0.00 0.00 0.00 4.17
7322 8228 2.852413 GTCGTTCACATATCGTCCACAG 59.148 50.000 0.00 0.00 0.00 3.66
7323 8229 1.588404 CGTTCACATATCGTCCACAGC 59.412 52.381 0.00 0.00 0.00 4.40
7324 8230 1.933853 GTTCACATATCGTCCACAGCC 59.066 52.381 0.00 0.00 0.00 4.85
7325 8231 0.464036 TCACATATCGTCCACAGCCC 59.536 55.000 0.00 0.00 0.00 5.19
7326 8232 0.177836 CACATATCGTCCACAGCCCA 59.822 55.000 0.00 0.00 0.00 5.36
7327 8233 1.131638 ACATATCGTCCACAGCCCAT 58.868 50.000 0.00 0.00 0.00 4.00
7328 8234 1.070758 ACATATCGTCCACAGCCCATC 59.929 52.381 0.00 0.00 0.00 3.51
7329 8235 0.318441 ATATCGTCCACAGCCCATCG 59.682 55.000 0.00 0.00 0.00 3.84
7330 8236 1.040893 TATCGTCCACAGCCCATCGT 61.041 55.000 0.00 0.00 0.00 3.73
7331 8237 2.578163 ATCGTCCACAGCCCATCGTG 62.578 60.000 0.00 0.00 0.00 4.35
7332 8238 2.347490 GTCCACAGCCCATCGTGT 59.653 61.111 0.00 0.00 0.00 4.49
7333 8239 2.034879 GTCCACAGCCCATCGTGTG 61.035 63.158 0.00 0.00 43.15 3.82
7334 8240 2.032528 CCACAGCCCATCGTGTGT 59.967 61.111 2.10 0.00 42.17 3.72
7335 8241 1.188871 TCCACAGCCCATCGTGTGTA 61.189 55.000 2.10 0.00 42.17 2.90
7336 8242 0.107703 CCACAGCCCATCGTGTGTAT 60.108 55.000 2.10 0.00 42.17 2.29
7337 8243 1.138069 CCACAGCCCATCGTGTGTATA 59.862 52.381 2.10 0.00 42.17 1.47
7338 8244 2.473816 CACAGCCCATCGTGTGTATAG 58.526 52.381 0.00 0.00 39.42 1.31
7339 8245 1.202533 ACAGCCCATCGTGTGTATAGC 60.203 52.381 0.00 0.00 0.00 2.97
7340 8246 1.119684 AGCCCATCGTGTGTATAGCA 58.880 50.000 0.00 0.00 0.00 3.49
7341 8247 1.069204 AGCCCATCGTGTGTATAGCAG 59.931 52.381 0.00 0.00 0.00 4.24
7342 8248 1.502231 CCCATCGTGTGTATAGCAGC 58.498 55.000 0.00 0.00 0.00 5.25
7343 8249 1.131771 CCATCGTGTGTATAGCAGCG 58.868 55.000 0.00 0.00 0.00 5.18
7344 8250 0.504384 CATCGTGTGTATAGCAGCGC 59.496 55.000 0.00 0.00 0.00 5.92
7345 8251 0.385751 ATCGTGTGTATAGCAGCGCT 59.614 50.000 2.64 2.64 43.41 5.92
7346 8252 0.525455 TCGTGTGTATAGCAGCGCTG 60.525 55.000 32.83 32.83 40.10 5.18
7347 8253 0.525455 CGTGTGTATAGCAGCGCTGA 60.525 55.000 40.21 21.71 40.10 4.26
7348 8254 1.858091 GTGTGTATAGCAGCGCTGAT 58.142 50.000 40.21 36.38 40.10 2.90
7349 8255 2.205074 GTGTGTATAGCAGCGCTGATT 58.795 47.619 40.21 27.59 40.10 2.57
7350 8256 2.609459 GTGTGTATAGCAGCGCTGATTT 59.391 45.455 40.21 30.51 40.10 2.17
7351 8257 3.802139 GTGTGTATAGCAGCGCTGATTTA 59.198 43.478 40.21 29.37 40.10 1.40
7352 8258 4.270084 GTGTGTATAGCAGCGCTGATTTAA 59.730 41.667 40.21 20.73 40.10 1.52
7353 8259 4.873259 TGTGTATAGCAGCGCTGATTTAAA 59.127 37.500 40.21 25.22 40.10 1.52
7354 8260 5.006649 TGTGTATAGCAGCGCTGATTTAAAG 59.993 40.000 40.21 12.45 40.10 1.85
7355 8261 5.006746 GTGTATAGCAGCGCTGATTTAAAGT 59.993 40.000 40.21 17.84 40.10 2.66
7356 8262 5.584649 TGTATAGCAGCGCTGATTTAAAGTT 59.415 36.000 40.21 15.27 40.10 2.66
7357 8263 3.923017 AGCAGCGCTGATTTAAAGTTT 57.077 38.095 40.21 8.81 37.57 2.66
7358 8264 4.243007 AGCAGCGCTGATTTAAAGTTTT 57.757 36.364 40.21 7.26 37.57 2.43
7359 8265 4.229876 AGCAGCGCTGATTTAAAGTTTTC 58.770 39.130 40.21 17.38 37.57 2.29
7360 8266 3.980775 GCAGCGCTGATTTAAAGTTTTCA 59.019 39.130 40.21 0.00 0.00 2.69
7361 8267 4.622740 GCAGCGCTGATTTAAAGTTTTCAT 59.377 37.500 40.21 0.00 0.00 2.57
7362 8268 5.799936 GCAGCGCTGATTTAAAGTTTTCATA 59.200 36.000 40.21 0.00 0.00 2.15
7363 8269 6.473455 GCAGCGCTGATTTAAAGTTTTCATAT 59.527 34.615 40.21 0.00 0.00 1.78
7364 8270 7.643764 GCAGCGCTGATTTAAAGTTTTCATATA 59.356 33.333 40.21 0.00 0.00 0.86
7365 8271 9.669353 CAGCGCTGATTTAAAGTTTTCATATAT 57.331 29.630 33.66 0.00 0.00 0.86
7377 8283 8.823220 AAGTTTTCATATATAAGCACAAGGGT 57.177 30.769 0.00 0.00 0.00 4.34
7378 8284 9.914834 AAGTTTTCATATATAAGCACAAGGGTA 57.085 29.630 0.00 0.00 0.00 3.69
7379 8285 9.914834 AGTTTTCATATATAAGCACAAGGGTAA 57.085 29.630 0.00 0.00 0.00 2.85
7380 8286 9.946165 GTTTTCATATATAAGCACAAGGGTAAC 57.054 33.333 0.00 0.00 0.00 2.50
7381 8287 9.688091 TTTTCATATATAAGCACAAGGGTAACA 57.312 29.630 0.00 0.00 39.74 2.41
7382 8288 9.688091 TTTCATATATAAGCACAAGGGTAACAA 57.312 29.630 0.00 0.00 39.74 2.83
7383 8289 8.671384 TCATATATAAGCACAAGGGTAACAAC 57.329 34.615 0.00 0.00 39.74 3.32
7384 8290 7.717875 TCATATATAAGCACAAGGGTAACAACC 59.282 37.037 0.00 0.00 39.74 3.77
7385 8291 2.748209 AAGCACAAGGGTAACAACCT 57.252 45.000 0.00 0.00 40.96 3.50
7394 8300 5.366482 AAGGGTAACAACCTTGCAAATTT 57.634 34.783 0.00 0.00 46.21 1.82
7395 8301 6.487299 AAGGGTAACAACCTTGCAAATTTA 57.513 33.333 0.00 0.00 46.21 1.40
7396 8302 6.680148 AGGGTAACAACCTTGCAAATTTAT 57.320 33.333 0.00 0.00 33.64 1.40
7397 8303 7.784470 AGGGTAACAACCTTGCAAATTTATA 57.216 32.000 0.00 0.00 33.64 0.98
7398 8304 8.374184 AGGGTAACAACCTTGCAAATTTATAT 57.626 30.769 0.00 0.00 33.64 0.86
7399 8305 8.257306 AGGGTAACAACCTTGCAAATTTATATG 58.743 33.333 0.00 0.00 33.64 1.78
7400 8306 7.011016 GGGTAACAACCTTGCAAATTTATATGC 59.989 37.037 0.00 0.00 40.18 3.14
7452 8358 4.697756 CCGGCCTCTCAAACGCCA 62.698 66.667 0.00 0.00 43.17 5.69
7453 8359 3.423154 CGGCCTCTCAAACGCCAC 61.423 66.667 0.00 0.00 43.17 5.01
7497 8403 2.745379 GGCACCCCTCAAATGTTGT 58.255 52.632 0.00 0.00 0.00 3.32
7509 8415 1.177895 AATGTTGTGCCGCACATCCA 61.178 50.000 26.22 23.58 44.16 3.41
7516 8422 1.451207 GCCGCACATCCACATACCA 60.451 57.895 0.00 0.00 0.00 3.25
7518 8424 0.392327 CCGCACATCCACATACCACA 60.392 55.000 0.00 0.00 0.00 4.17
7522 8428 3.625313 CGCACATCCACATACCACAAATA 59.375 43.478 0.00 0.00 0.00 1.40
7524 8430 4.202010 GCACATCCACATACCACAAATACC 60.202 45.833 0.00 0.00 0.00 2.73
7528 8434 5.105567 TCCACATACCACAAATACCGATT 57.894 39.130 0.00 0.00 0.00 3.34
7540 8446 7.228507 CCACAAATACCGATTCTCAAATCCATA 59.771 37.037 0.00 0.00 38.46 2.74
7541 8447 8.786898 CACAAATACCGATTCTCAAATCCATAT 58.213 33.333 0.00 0.00 38.46 1.78
7546 8452 9.838339 ATACCGATTCTCAAATCCATATAATCC 57.162 33.333 0.00 0.00 38.46 3.01
7552 8458 8.888836 TTCTCAAATCCATATAATCCATGCAT 57.111 30.769 0.00 0.00 0.00 3.96
7563 8469 6.915544 ATAATCCATGCATGTCGATCATAC 57.084 37.500 24.58 0.00 34.67 2.39
7564 8470 2.676076 TCCATGCATGTCGATCATACG 58.324 47.619 24.58 5.98 34.67 3.06
7565 8471 2.295909 TCCATGCATGTCGATCATACGA 59.704 45.455 24.58 8.24 40.00 3.43
7601 8507 2.535331 TGCCAAAGTTCGAAACAAAGC 58.465 42.857 0.00 1.35 0.00 3.51
7605 8511 4.143009 GCCAAAGTTCGAAACAAAGCAAAA 60.143 37.500 0.00 0.00 0.00 2.44
7611 8517 7.127917 AGTTCGAAACAAAGCAAAACAAATT 57.872 28.000 0.00 0.00 0.00 1.82
7622 8528 9.566624 CAAAGCAAAACAAATTATAGTTCAACG 57.433 29.630 0.00 0.00 0.00 4.10
7626 8532 8.211838 GCAAAACAAATTATAGTTCAACGAACC 58.788 33.333 3.31 0.00 42.85 3.62
7628 8534 7.424227 AACAAATTATAGTTCAACGAACCGA 57.576 32.000 3.31 0.00 42.85 4.69
7635 8541 0.589223 TTCAACGAACCGAACATGGC 59.411 50.000 0.00 0.00 0.00 4.40
7652 8558 6.730960 ACATGGCAAAATGAAATCAATGTC 57.269 33.333 0.00 0.00 0.00 3.06
7658 8564 5.404946 CAAAATGAAATCAATGTCCGAGCT 58.595 37.500 0.00 0.00 0.00 4.09
7662 8568 3.436704 TGAAATCAATGTCCGAGCTTGAC 59.563 43.478 1.22 6.46 32.16 3.18
7673 8579 2.892425 GCTTGACGGATGGCCTCG 60.892 66.667 3.32 8.29 0.00 4.63
7679 8585 2.029666 CGGATGGCCTCGGATCAC 59.970 66.667 3.32 0.00 0.00 3.06
7684 8590 3.474570 GGCCTCGGATCACTGGCT 61.475 66.667 17.51 0.00 44.36 4.75
7685 8591 2.107953 GCCTCGGATCACTGGCTC 59.892 66.667 12.83 0.00 41.92 4.70
7721 8675 1.078848 GAATGTGTCCTGCTCCGCT 60.079 57.895 0.00 0.00 0.00 5.52
7746 8700 4.021925 GGGCTGCCTGTTCCGACT 62.022 66.667 19.68 0.00 0.00 4.18
7767 9745 0.035056 CATCCGGACCTCTTGCCTTT 60.035 55.000 6.12 0.00 0.00 3.11
7768 9746 0.035056 ATCCGGACCTCTTGCCTTTG 60.035 55.000 6.12 0.00 0.00 2.77
7801 9779 3.961480 TCTTCTTCTTGCTCGGATTGA 57.039 42.857 0.00 0.00 0.00 2.57
7823 9801 1.890876 TCGGATGTTGTCCCAACTTG 58.109 50.000 8.41 0.00 44.77 3.16
7832 9810 0.388520 GTCCCAACTTGAAATGCGGC 60.389 55.000 0.00 0.00 0.00 6.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 7.913789 AGGTAGTATTGTATTTGTGGTCTCAA 58.086 34.615 0.00 0.00 0.00 3.02
11 13 7.328737 ACAGAGGTAGTATTGTATTTGTGGTC 58.671 38.462 0.00 0.00 0.00 4.02
18 20 7.735326 ACCAAGACAGAGGTAGTATTGTATT 57.265 36.000 0.00 0.00 36.69 1.89
19 21 7.735326 AACCAAGACAGAGGTAGTATTGTAT 57.265 36.000 0.00 0.00 36.69 2.29
48 50 3.964031 TGGCACAAAATATTATGGGGACC 59.036 43.478 0.00 0.00 45.01 4.46
198 203 7.489574 TTGTGCCAAATTTTAACCAAAGATC 57.510 32.000 0.00 0.00 0.00 2.75
217 222 1.338674 GGCCCCCTTTGTATTTTGTGC 60.339 52.381 0.00 0.00 0.00 4.57
218 223 1.974236 TGGCCCCCTTTGTATTTTGTG 59.026 47.619 0.00 0.00 0.00 3.33
232 237 0.040499 TGTCCTGGTTTATTGGCCCC 59.960 55.000 0.00 0.00 0.00 5.80
233 238 2.159179 ATGTCCTGGTTTATTGGCCC 57.841 50.000 0.00 0.00 0.00 5.80
235 240 3.898482 ACCTATGTCCTGGTTTATTGGC 58.102 45.455 0.00 0.00 31.62 4.52
251 256 6.685620 GCATTGGCTTGTACTGTACTACCTAT 60.686 42.308 17.98 14.43 36.96 2.57
252 257 5.394883 GCATTGGCTTGTACTGTACTACCTA 60.395 44.000 17.98 13.08 36.96 3.08
253 258 4.623171 GCATTGGCTTGTACTGTACTACCT 60.623 45.833 17.98 1.28 36.96 3.08
263 268 3.308530 GTTTGTCTGCATTGGCTTGTAC 58.691 45.455 0.00 0.00 41.91 2.90
266 271 1.068895 TGGTTTGTCTGCATTGGCTTG 59.931 47.619 0.00 0.00 41.91 4.01
302 307 8.017373 GCGCAAACAAATATATATGTCTGATGT 58.983 33.333 0.30 0.00 0.00 3.06
334 340 4.832823 AGTGGCAATTGTATTATTAGGGGC 59.167 41.667 7.40 0.00 0.00 5.80
418 424 7.891498 AGAAAATAAGGTGTTACAAACCAGT 57.109 32.000 0.00 0.00 40.40 4.00
436 442 6.498303 AGGCCACCTTTCAATTAGAAGAAAAT 59.502 34.615 5.01 0.00 37.57 1.82
456 462 6.454795 CAAAAGCAAAAGTAATCTTAGGCCA 58.545 36.000 5.01 0.00 35.12 5.36
545 840 5.933790 TGTCGTGTGGCATCTTATAAAAAC 58.066 37.500 0.00 0.00 0.00 2.43
553 848 7.497579 TGTTATAAATATGTCGTGTGGCATCTT 59.502 33.333 0.00 0.00 0.00 2.40
670 967 6.994421 AAGTTGGACCCTTGTAAATTTGAT 57.006 33.333 0.00 0.00 0.00 2.57
733 1031 5.533154 ACGAGTTTGTGGGTTTCAATTGATA 59.467 36.000 9.40 1.04 0.00 2.15
777 1485 6.923012 TGCAATTTACAATTACTCTGTGCAT 58.077 32.000 0.00 0.00 0.00 3.96
872 1705 5.651576 AGGGAGTAGTAGTAAGCTGTGTAAC 59.348 44.000 0.00 0.00 37.35 2.50
874 1707 5.435291 GAGGGAGTAGTAGTAAGCTGTGTA 58.565 45.833 0.00 0.00 0.00 2.90
875 1708 4.271661 GAGGGAGTAGTAGTAAGCTGTGT 58.728 47.826 0.00 0.00 0.00 3.72
876 1709 3.633065 GGAGGGAGTAGTAGTAAGCTGTG 59.367 52.174 0.00 0.00 0.00 3.66
877 1710 3.684981 CGGAGGGAGTAGTAGTAAGCTGT 60.685 52.174 0.00 0.00 0.00 4.40
878 1711 2.879646 CGGAGGGAGTAGTAGTAAGCTG 59.120 54.545 0.00 0.00 0.00 4.24
880 1713 2.929641 ACGGAGGGAGTAGTAGTAAGC 58.070 52.381 0.00 0.00 0.00 3.09
881 1714 4.346418 TCCTACGGAGGGAGTAGTAGTAAG 59.654 50.000 15.51 0.00 43.94 2.34
884 1717 2.769209 TCCTACGGAGGGAGTAGTAGT 58.231 52.381 15.51 0.00 43.94 2.73
886 1719 2.158900 CGTTCCTACGGAGGGAGTAGTA 60.159 54.545 15.51 0.00 43.94 1.82
888 1721 1.307097 CGTTCCTACGGAGGGAGTAG 58.693 60.000 15.51 0.00 43.94 2.57
889 1722 3.483954 CGTTCCTACGGAGGGAGTA 57.516 57.895 15.51 0.00 43.94 2.59
890 1723 4.333417 CGTTCCTACGGAGGGAGT 57.667 61.111 15.51 0.00 43.94 3.85
898 1731 7.096106 TACACTATTGTCAAAAACGTTCCTACG 60.096 37.037 0.00 0.00 44.17 3.51
899 1732 6.951643 ACACTATTGTCAAAAACGTTCCTAC 58.048 36.000 0.00 0.00 0.00 3.18
900 1733 8.659925 TTACACTATTGTCAAAAACGTTCCTA 57.340 30.769 0.00 0.00 37.15 2.94
901 1734 7.556733 TTACACTATTGTCAAAAACGTTCCT 57.443 32.000 0.00 0.00 37.15 3.36
902 1735 8.617761 TTTTACACTATTGTCAAAAACGTTCC 57.382 30.769 0.00 0.00 37.15 3.62
926 1759 9.855021 CTCAATCCCAAAATATAAGAACGTTTT 57.145 29.630 0.46 0.00 0.00 2.43
927 1760 8.466798 CCTCAATCCCAAAATATAAGAACGTTT 58.533 33.333 0.46 0.00 0.00 3.60
928 1761 7.614192 ACCTCAATCCCAAAATATAAGAACGTT 59.386 33.333 0.00 0.00 0.00 3.99
929 1762 7.116736 ACCTCAATCCCAAAATATAAGAACGT 58.883 34.615 0.00 0.00 0.00 3.99
930 1763 7.568199 ACCTCAATCCCAAAATATAAGAACG 57.432 36.000 0.00 0.00 0.00 3.95
931 1764 9.628500 ACTACCTCAATCCCAAAATATAAGAAC 57.372 33.333 0.00 0.00 0.00 3.01
937 1770 9.990868 AAAGTTACTACCTCAATCCCAAAATAT 57.009 29.630 0.00 0.00 0.00 1.28
938 1771 9.816787 AAAAGTTACTACCTCAATCCCAAAATA 57.183 29.630 0.00 0.00 0.00 1.40
939 1772 8.721133 AAAAGTTACTACCTCAATCCCAAAAT 57.279 30.769 0.00 0.00 0.00 1.82
940 1773 8.417884 CAAAAAGTTACTACCTCAATCCCAAAA 58.582 33.333 0.00 0.00 0.00 2.44
941 1774 7.562088 ACAAAAAGTTACTACCTCAATCCCAAA 59.438 33.333 0.00 0.00 0.00 3.28
942 1775 7.013846 CACAAAAAGTTACTACCTCAATCCCAA 59.986 37.037 0.00 0.00 0.00 4.12
943 1776 6.488683 CACAAAAAGTTACTACCTCAATCCCA 59.511 38.462 0.00 0.00 0.00 4.37
944 1777 6.713450 TCACAAAAAGTTACTACCTCAATCCC 59.287 38.462 0.00 0.00 0.00 3.85
945 1778 7.227910 TGTCACAAAAAGTTACTACCTCAATCC 59.772 37.037 0.00 0.00 0.00 3.01
946 1779 8.149973 TGTCACAAAAAGTTACTACCTCAATC 57.850 34.615 0.00 0.00 0.00 2.67
947 1780 7.255139 GCTGTCACAAAAAGTTACTACCTCAAT 60.255 37.037 0.00 0.00 0.00 2.57
948 1781 6.037830 GCTGTCACAAAAAGTTACTACCTCAA 59.962 38.462 0.00 0.00 0.00 3.02
949 1782 5.526111 GCTGTCACAAAAAGTTACTACCTCA 59.474 40.000 0.00 0.00 0.00 3.86
950 1783 5.758784 AGCTGTCACAAAAAGTTACTACCTC 59.241 40.000 0.00 0.00 0.00 3.85
951 1784 5.681639 AGCTGTCACAAAAAGTTACTACCT 58.318 37.500 0.00 0.00 0.00 3.08
952 1785 6.373186 AAGCTGTCACAAAAAGTTACTACC 57.627 37.500 0.00 0.00 0.00 3.18
953 1786 8.139521 ACTAAGCTGTCACAAAAAGTTACTAC 57.860 34.615 0.00 0.00 0.00 2.73
954 1787 9.252962 GTACTAAGCTGTCACAAAAAGTTACTA 57.747 33.333 0.00 0.00 0.00 1.82
955 1788 7.985752 AGTACTAAGCTGTCACAAAAAGTTACT 59.014 33.333 0.00 0.00 0.00 2.24
956 1789 8.139521 AGTACTAAGCTGTCACAAAAAGTTAC 57.860 34.615 0.00 0.00 0.00 2.50
957 1790 9.820725 TTAGTACTAAGCTGTCACAAAAAGTTA 57.179 29.630 11.38 0.00 0.00 2.24
958 1791 8.610035 GTTAGTACTAAGCTGTCACAAAAAGTT 58.390 33.333 15.68 0.00 0.00 2.66
959 1792 7.985752 AGTTAGTACTAAGCTGTCACAAAAAGT 59.014 33.333 15.68 0.00 31.21 2.66
960 1793 8.366671 AGTTAGTACTAAGCTGTCACAAAAAG 57.633 34.615 15.68 0.00 31.21 2.27
961 1794 8.202137 AGAGTTAGTACTAAGCTGTCACAAAAA 58.798 33.333 15.68 0.00 33.84 1.94
962 1795 7.652105 CAGAGTTAGTACTAAGCTGTCACAAAA 59.348 37.037 24.28 1.01 33.84 2.44
963 1796 7.145985 CAGAGTTAGTACTAAGCTGTCACAAA 58.854 38.462 24.28 1.18 33.84 2.83
964 1797 6.264744 ACAGAGTTAGTACTAAGCTGTCACAA 59.735 38.462 28.56 4.78 37.32 3.33
965 1798 5.768662 ACAGAGTTAGTACTAAGCTGTCACA 59.231 40.000 28.56 3.88 37.32 3.58
966 1799 6.256912 ACAGAGTTAGTACTAAGCTGTCAC 57.743 41.667 28.56 14.48 37.32 3.67
967 1800 7.392418 TCTACAGAGTTAGTACTAAGCTGTCA 58.608 38.462 33.07 24.62 39.93 3.58
968 1801 7.846644 TCTACAGAGTTAGTACTAAGCTGTC 57.153 40.000 33.07 20.99 39.93 3.51
986 1821 9.524106 TCGGTTATTATACATGTTGTTCTACAG 57.476 33.333 2.30 0.00 0.00 2.74
1048 1884 3.336694 AGGAGAGAGAAAGGGAAGAGACT 59.663 47.826 0.00 0.00 0.00 3.24
1176 2012 2.581953 GCTTGCCTCTCGCTCTCG 60.582 66.667 0.00 0.00 38.78 4.04
1177 2013 1.519013 CAGCTTGCCTCTCGCTCTC 60.519 63.158 0.00 0.00 38.78 3.20
1178 2014 2.578128 CAGCTTGCCTCTCGCTCT 59.422 61.111 0.00 0.00 38.78 4.09
1179 2015 3.194308 GCAGCTTGCCTCTCGCTC 61.194 66.667 0.00 0.00 37.42 5.03
1753 2597 1.398692 AACAACCGCAACCAAGTCAT 58.601 45.000 0.00 0.00 0.00 3.06
1755 2599 1.334689 GCTAACAACCGCAACCAAGTC 60.335 52.381 0.00 0.00 0.00 3.01
1757 2601 0.385473 CGCTAACAACCGCAACCAAG 60.385 55.000 0.00 0.00 0.00 3.61
1900 2744 3.591196 ATTTTCTATGCTTTTGCCGCA 57.409 38.095 0.00 0.00 46.87 5.69
1953 2800 3.600388 CCTCCAACTAACTGCGAAGAAT 58.400 45.455 0.00 0.00 0.00 2.40
2161 3009 1.133025 GATGCACGGGAAAGTGAATGG 59.867 52.381 0.00 0.00 40.33 3.16
2162 3010 1.811965 TGATGCACGGGAAAGTGAATG 59.188 47.619 0.00 0.00 40.33 2.67
2253 3101 9.888878 ATCAAGATAAGAATCATGCAATTTACG 57.111 29.630 0.00 0.00 32.14 3.18
2475 3323 6.180472 TCCCTCGATCTTCTAAAAGCAAATT 58.820 36.000 0.00 0.00 32.18 1.82
2500 3348 5.405935 AATAGCTCACCCCAAACATTTTC 57.594 39.130 0.00 0.00 0.00 2.29
2593 3441 6.825944 AAGAGGAGGCTTATTTGTTTCTTC 57.174 37.500 0.00 0.00 0.00 2.87
2622 3470 4.015084 CTGTCTCCATTCCTTGCAAGAAT 58.985 43.478 28.05 19.99 34.25 2.40
2675 3523 4.216042 CACTTACACAAATGCTCATGGACA 59.784 41.667 0.00 0.00 0.00 4.02
2676 3524 4.726416 CACTTACACAAATGCTCATGGAC 58.274 43.478 0.00 0.00 0.00 4.02
2950 3800 3.310227 TGTGTAACGGTTCACATGTTCAC 59.690 43.478 9.02 0.00 42.39 3.18
2968 3818 7.715265 CACTAAAGAAGATGTTAGTGTGTGT 57.285 36.000 13.07 0.00 46.35 3.72
3091 3941 8.361139 AGCAGATGACATACTATTAGGTTGTAC 58.639 37.037 0.00 0.00 0.00 2.90
3208 4058 7.768120 TGGGCATTAATTTCATCAATGTTTACC 59.232 33.333 1.07 0.00 33.22 2.85
3231 4081 6.644347 AGTTCTACATGACTACAGAAATGGG 58.356 40.000 0.00 0.00 0.00 4.00
3291 4141 9.736023 AGCTGTTACAAGATTTTCTTTTGTAAG 57.264 29.630 8.73 1.68 43.76 2.34
3756 4606 6.889722 TCTGGTTAATTCCAAGAATAACCCAG 59.110 38.462 15.82 15.82 36.91 4.45
4254 5105 2.487762 CAGTGCCACGGTTGACATAATT 59.512 45.455 0.00 0.00 0.00 1.40
4268 5119 0.392060 CACTAGCATGAGCAGTGCCA 60.392 55.000 12.58 10.16 45.49 4.92
4482 5370 2.259014 TAACTGGGGTAGGGTTCCTC 57.741 55.000 0.00 0.00 34.61 3.71
4722 5610 7.549134 ACAGAATCTTCGACAGCAATATTAACA 59.451 33.333 0.00 0.00 0.00 2.41
4946 5835 7.905493 GCAACATCAAGTACTAAACTATGAAGC 59.095 37.037 0.00 3.09 37.50 3.86
5002 5891 9.994432 GAACATTAGCCATATGCAAATATAGAC 57.006 33.333 0.00 0.00 44.83 2.59
5010 5899 5.221283 CCACATGAACATTAGCCATATGCAA 60.221 40.000 0.00 0.00 44.83 4.08
5023 5912 5.072741 ACTGAAAACTAGCCACATGAACAT 58.927 37.500 0.00 0.00 0.00 2.71
5152 6041 1.001597 GACCGTTCAGACTCAAGACGT 60.002 52.381 0.00 0.00 0.00 4.34
5568 6457 6.890268 ACCCTGTAATTAAATCAGAGGGAAAC 59.110 38.462 18.14 0.00 0.00 2.78
6171 7060 2.145397 TTATCTGAGAGTCCTGCCGT 57.855 50.000 0.00 0.00 0.00 5.68
6231 7120 2.034999 GGCAAACCATCCCCGTCA 59.965 61.111 0.00 0.00 35.26 4.35
6237 7126 1.001393 TTCCTCCGGCAAACCATCC 60.001 57.895 0.00 0.00 34.57 3.51
6255 7144 2.338984 GACGCCTTGTCGACCAGT 59.661 61.111 14.12 5.67 37.96 4.00
6282 7171 0.106967 GGAGGGGCAGGACATTCTTC 60.107 60.000 0.00 0.00 0.00 2.87
6312 7201 1.066587 CTCGATGAGGCCTTCCGAC 59.933 63.158 6.77 0.00 37.47 4.79
6878 7770 0.887387 CCAAACGAACGGGACCATGT 60.887 55.000 0.00 0.00 0.00 3.21
6958 7850 0.605589 ACAAACAGGAGAGCGAGGAG 59.394 55.000 0.00 0.00 0.00 3.69
6959 7851 1.819288 CTACAAACAGGAGAGCGAGGA 59.181 52.381 0.00 0.00 0.00 3.71
6960 7852 1.819288 TCTACAAACAGGAGAGCGAGG 59.181 52.381 0.00 0.00 0.00 4.63
6961 7853 3.057174 AGTTCTACAAACAGGAGAGCGAG 60.057 47.826 0.00 0.00 0.00 5.03
6962 7854 2.891580 AGTTCTACAAACAGGAGAGCGA 59.108 45.455 0.00 0.00 0.00 4.93
6963 7855 3.305398 AGTTCTACAAACAGGAGAGCG 57.695 47.619 0.00 0.00 0.00 5.03
6964 7856 4.816925 ACAAAGTTCTACAAACAGGAGAGC 59.183 41.667 0.00 0.00 0.00 4.09
6965 7857 5.817816 ACACAAAGTTCTACAAACAGGAGAG 59.182 40.000 0.00 0.00 0.00 3.20
6966 7858 5.741011 ACACAAAGTTCTACAAACAGGAGA 58.259 37.500 0.00 0.00 0.00 3.71
6967 7859 6.128007 ACAACACAAAGTTCTACAAACAGGAG 60.128 38.462 0.00 0.00 38.74 3.69
6968 7860 5.708230 ACAACACAAAGTTCTACAAACAGGA 59.292 36.000 0.00 0.00 38.74 3.86
6969 7861 5.949735 ACAACACAAAGTTCTACAAACAGG 58.050 37.500 0.00 0.00 38.74 4.00
6970 7862 7.970384 TCTACAACACAAAGTTCTACAAACAG 58.030 34.615 0.00 0.00 38.74 3.16
6971 7863 7.908827 TCTACAACACAAAGTTCTACAAACA 57.091 32.000 0.00 0.00 38.74 2.83
6972 7864 8.395633 ACATCTACAACACAAAGTTCTACAAAC 58.604 33.333 0.00 0.00 38.74 2.93
7017 7923 2.160219 CCTGATCAACGAACCACATGTG 59.840 50.000 19.31 19.31 0.00 3.21
7028 7934 0.824109 TACTGCCCTCCTGATCAACG 59.176 55.000 0.00 0.00 0.00 4.10
7061 7967 3.189910 CCAAAGCGTAAAAACCTAGGGTC 59.810 47.826 14.81 0.00 33.12 4.46
7162 8068 5.241662 ACTAAGCCAACAACTCTTGAGATC 58.758 41.667 4.49 0.00 0.00 2.75
7172 8078 5.633601 GCATCCTAAAAACTAAGCCAACAAC 59.366 40.000 0.00 0.00 0.00 3.32
7190 8096 3.384789 TCTGCATAGTAGTTTCGCATCCT 59.615 43.478 0.00 0.00 31.10 3.24
7196 8102 4.857588 ACTTTCGTCTGCATAGTAGTTTCG 59.142 41.667 0.00 0.00 0.00 3.46
7197 8103 5.288952 GGACTTTCGTCTGCATAGTAGTTTC 59.711 44.000 0.00 0.00 40.10 2.78
7198 8104 5.169295 GGACTTTCGTCTGCATAGTAGTTT 58.831 41.667 0.00 0.00 40.10 2.66
7199 8105 4.381718 GGGACTTTCGTCTGCATAGTAGTT 60.382 45.833 0.00 0.00 40.10 2.24
7200 8106 3.130693 GGGACTTTCGTCTGCATAGTAGT 59.869 47.826 0.00 0.00 40.10 2.73
7201 8107 3.381908 AGGGACTTTCGTCTGCATAGTAG 59.618 47.826 0.00 0.00 40.10 2.57
7202 8108 3.130516 CAGGGACTTTCGTCTGCATAGTA 59.869 47.826 0.00 0.00 40.10 1.82
7203 8109 2.093973 CAGGGACTTTCGTCTGCATAGT 60.094 50.000 0.00 0.00 40.10 2.12
7204 8110 2.544685 CAGGGACTTTCGTCTGCATAG 58.455 52.381 0.00 0.00 40.10 2.23
7205 8111 1.405526 GCAGGGACTTTCGTCTGCATA 60.406 52.381 8.98 0.00 39.68 3.14
7206 8112 0.674895 GCAGGGACTTTCGTCTGCAT 60.675 55.000 8.98 0.00 39.68 3.96
7207 8113 1.301716 GCAGGGACTTTCGTCTGCA 60.302 57.895 8.98 0.00 39.68 4.41
7208 8114 1.301716 TGCAGGGACTTTCGTCTGC 60.302 57.895 7.16 7.16 40.07 4.26
7209 8115 1.284982 CGTGCAGGGACTTTCGTCTG 61.285 60.000 0.00 0.00 40.10 3.51
7210 8116 1.006102 CGTGCAGGGACTTTCGTCT 60.006 57.895 0.00 0.00 40.10 4.18
7211 8117 0.389948 ATCGTGCAGGGACTTTCGTC 60.390 55.000 6.56 0.00 34.60 4.20
7212 8118 0.389948 GATCGTGCAGGGACTTTCGT 60.390 55.000 6.56 0.00 34.60 3.85
7213 8119 0.389817 TGATCGTGCAGGGACTTTCG 60.390 55.000 6.56 0.00 34.60 3.46
7214 8120 1.363744 CTGATCGTGCAGGGACTTTC 58.636 55.000 6.56 0.00 34.60 2.62
7215 8121 3.540211 CTGATCGTGCAGGGACTTT 57.460 52.632 6.56 0.00 34.60 2.66
7222 8128 1.078759 GTCGTTCCCTGATCGTGCAG 61.079 60.000 0.00 0.00 35.66 4.41
7223 8129 1.080093 GTCGTTCCCTGATCGTGCA 60.080 57.895 0.00 0.00 0.00 4.57
7224 8130 1.078759 CTGTCGTTCCCTGATCGTGC 61.079 60.000 0.00 0.00 0.00 5.34
7225 8131 1.078759 GCTGTCGTTCCCTGATCGTG 61.079 60.000 0.00 0.00 0.00 4.35
7226 8132 1.215647 GCTGTCGTTCCCTGATCGT 59.784 57.895 0.00 0.00 0.00 3.73
7227 8133 1.519455 GGCTGTCGTTCCCTGATCG 60.519 63.158 0.00 0.00 0.00 3.69
7228 8134 0.036388 TTGGCTGTCGTTCCCTGATC 60.036 55.000 0.00 0.00 0.00 2.92
7229 8135 0.400213 TTTGGCTGTCGTTCCCTGAT 59.600 50.000 0.00 0.00 0.00 2.90
7230 8136 0.400213 ATTTGGCTGTCGTTCCCTGA 59.600 50.000 0.00 0.00 0.00 3.86
7231 8137 0.804989 GATTTGGCTGTCGTTCCCTG 59.195 55.000 0.00 0.00 0.00 4.45
7232 8138 0.322546 GGATTTGGCTGTCGTTCCCT 60.323 55.000 0.00 0.00 0.00 4.20
7233 8139 0.608035 TGGATTTGGCTGTCGTTCCC 60.608 55.000 0.00 0.00 0.00 3.97
7234 8140 0.804989 CTGGATTTGGCTGTCGTTCC 59.195 55.000 0.00 0.00 0.00 3.62
7235 8141 0.169009 GCTGGATTTGGCTGTCGTTC 59.831 55.000 0.00 0.00 0.00 3.95
7236 8142 1.244019 GGCTGGATTTGGCTGTCGTT 61.244 55.000 0.00 0.00 0.00 3.85
7237 8143 1.675641 GGCTGGATTTGGCTGTCGT 60.676 57.895 0.00 0.00 0.00 4.34
7238 8144 2.753966 CGGCTGGATTTGGCTGTCG 61.754 63.158 0.00 0.00 0.00 4.35
7239 8145 1.675641 ACGGCTGGATTTGGCTGTC 60.676 57.895 0.00 0.00 43.54 3.51
7240 8146 2.436109 ACGGCTGGATTTGGCTGT 59.564 55.556 0.00 0.00 42.39 4.40
7241 8147 0.107703 TAGACGGCTGGATTTGGCTG 60.108 55.000 0.00 0.00 40.32 4.85
7242 8148 0.107654 GTAGACGGCTGGATTTGGCT 60.108 55.000 0.00 0.00 0.00 4.75
7243 8149 0.107654 AGTAGACGGCTGGATTTGGC 60.108 55.000 0.00 0.00 0.00 4.52
7244 8150 2.280628 GAAGTAGACGGCTGGATTTGG 58.719 52.381 0.00 0.00 0.00 3.28
7245 8151 2.972625 TGAAGTAGACGGCTGGATTTG 58.027 47.619 0.00 0.00 0.00 2.32
7246 8152 3.914426 ATGAAGTAGACGGCTGGATTT 57.086 42.857 0.00 0.00 0.00 2.17
7247 8153 3.914426 AATGAAGTAGACGGCTGGATT 57.086 42.857 0.00 0.00 0.00 3.01
7248 8154 3.197766 TGAAATGAAGTAGACGGCTGGAT 59.802 43.478 0.00 0.00 0.00 3.41
7249 8155 2.565391 TGAAATGAAGTAGACGGCTGGA 59.435 45.455 0.00 0.00 0.00 3.86
7250 8156 2.932614 CTGAAATGAAGTAGACGGCTGG 59.067 50.000 0.00 0.00 0.00 4.85
7251 8157 3.369147 CACTGAAATGAAGTAGACGGCTG 59.631 47.826 0.00 0.00 0.00 4.85
7252 8158 3.589988 CACTGAAATGAAGTAGACGGCT 58.410 45.455 0.00 0.00 0.00 5.52
7253 8159 2.094417 GCACTGAAATGAAGTAGACGGC 59.906 50.000 0.00 0.00 0.00 5.68
7254 8160 3.369147 CAGCACTGAAATGAAGTAGACGG 59.631 47.826 0.00 0.00 0.00 4.79
7255 8161 3.990469 ACAGCACTGAAATGAAGTAGACG 59.010 43.478 4.31 0.00 0.00 4.18
7256 8162 4.377841 GCACAGCACTGAAATGAAGTAGAC 60.378 45.833 4.31 0.00 0.00 2.59
7257 8163 3.748048 GCACAGCACTGAAATGAAGTAGA 59.252 43.478 4.31 0.00 0.00 2.59
7258 8164 3.499537 TGCACAGCACTGAAATGAAGTAG 59.500 43.478 4.31 0.00 31.71 2.57
7259 8165 3.475575 TGCACAGCACTGAAATGAAGTA 58.524 40.909 4.31 0.00 31.71 2.24
7260 8166 2.300433 TGCACAGCACTGAAATGAAGT 58.700 42.857 4.31 0.00 31.71 3.01
7261 8167 3.242518 CATGCACAGCACTGAAATGAAG 58.757 45.455 4.31 0.00 43.04 3.02
7262 8168 2.029739 CCATGCACAGCACTGAAATGAA 60.030 45.455 4.31 0.00 43.04 2.57
7263 8169 1.542472 CCATGCACAGCACTGAAATGA 59.458 47.619 4.31 0.00 43.04 2.57
7264 8170 1.542472 TCCATGCACAGCACTGAAATG 59.458 47.619 4.31 5.10 43.04 2.32
7265 8171 1.542915 GTCCATGCACAGCACTGAAAT 59.457 47.619 4.31 0.00 43.04 2.17
7266 8172 0.953727 GTCCATGCACAGCACTGAAA 59.046 50.000 4.31 0.00 43.04 2.69
7267 8173 1.229975 CGTCCATGCACAGCACTGAA 61.230 55.000 4.31 0.00 43.04 3.02
7268 8174 1.668793 CGTCCATGCACAGCACTGA 60.669 57.895 4.31 0.00 43.04 3.41
7269 8175 1.632948 CTCGTCCATGCACAGCACTG 61.633 60.000 0.00 0.00 43.04 3.66
7270 8176 1.375140 CTCGTCCATGCACAGCACT 60.375 57.895 0.00 0.00 43.04 4.40
7271 8177 3.031964 GCTCGTCCATGCACAGCAC 62.032 63.158 6.40 0.00 43.04 4.40
7272 8178 2.743538 GCTCGTCCATGCACAGCA 60.744 61.111 6.40 0.00 44.86 4.41
7273 8179 2.435586 AGCTCGTCCATGCACAGC 60.436 61.111 0.00 3.78 0.00 4.40
7274 8180 0.461516 ATCAGCTCGTCCATGCACAG 60.462 55.000 0.00 0.00 0.00 3.66
7275 8181 0.036105 AATCAGCTCGTCCATGCACA 60.036 50.000 0.00 0.00 0.00 4.57
7276 8182 1.089920 AAATCAGCTCGTCCATGCAC 58.910 50.000 0.00 0.00 0.00 4.57
7277 8183 1.089112 CAAATCAGCTCGTCCATGCA 58.911 50.000 0.00 0.00 0.00 3.96
7278 8184 0.248377 GCAAATCAGCTCGTCCATGC 60.248 55.000 0.00 0.00 0.00 4.06
7279 8185 1.089112 TGCAAATCAGCTCGTCCATG 58.911 50.000 0.00 0.00 34.99 3.66
7280 8186 2.048444 ATGCAAATCAGCTCGTCCAT 57.952 45.000 0.00 0.00 34.99 3.41
7281 8187 1.469703 CAATGCAAATCAGCTCGTCCA 59.530 47.619 0.00 0.00 34.99 4.02
7282 8188 1.470098 ACAATGCAAATCAGCTCGTCC 59.530 47.619 0.00 0.00 34.99 4.79
7283 8189 2.778659 GACAATGCAAATCAGCTCGTC 58.221 47.619 0.00 0.00 34.99 4.20
7284 8190 1.129251 CGACAATGCAAATCAGCTCGT 59.871 47.619 0.00 0.00 34.99 4.18
7285 8191 1.129251 ACGACAATGCAAATCAGCTCG 59.871 47.619 0.00 0.00 34.99 5.03
7286 8192 2.907910 ACGACAATGCAAATCAGCTC 57.092 45.000 0.00 0.00 34.99 4.09
7287 8193 2.553602 TGAACGACAATGCAAATCAGCT 59.446 40.909 0.00 0.00 34.99 4.24
7288 8194 2.658325 GTGAACGACAATGCAAATCAGC 59.342 45.455 0.00 0.00 0.00 4.26
7289 8195 3.887741 TGTGAACGACAATGCAAATCAG 58.112 40.909 0.00 0.00 0.00 2.90
7290 8196 3.978718 TGTGAACGACAATGCAAATCA 57.021 38.095 0.00 0.00 0.00 2.57
7291 8197 5.393452 CGATATGTGAACGACAATGCAAATC 59.607 40.000 0.00 0.00 38.36 2.17
7292 8198 5.163764 ACGATATGTGAACGACAATGCAAAT 60.164 36.000 0.00 0.00 38.36 2.32
7293 8199 4.153296 ACGATATGTGAACGACAATGCAAA 59.847 37.500 0.00 0.00 38.36 3.68
7294 8200 3.682377 ACGATATGTGAACGACAATGCAA 59.318 39.130 0.00 0.00 38.36 4.08
7295 8201 3.258228 ACGATATGTGAACGACAATGCA 58.742 40.909 0.00 0.00 38.36 3.96
7296 8202 3.302480 GGACGATATGTGAACGACAATGC 60.302 47.826 0.00 0.00 38.36 3.56
7297 8203 3.862845 TGGACGATATGTGAACGACAATG 59.137 43.478 0.00 0.00 38.36 2.82
7298 8204 3.863424 GTGGACGATATGTGAACGACAAT 59.137 43.478 0.00 0.00 38.36 2.71
7299 8205 3.247442 GTGGACGATATGTGAACGACAA 58.753 45.455 0.00 0.00 38.36 3.18
7300 8206 2.229302 TGTGGACGATATGTGAACGACA 59.771 45.455 0.00 0.00 39.53 4.35
7301 8207 2.852413 CTGTGGACGATATGTGAACGAC 59.148 50.000 0.00 0.00 0.00 4.34
7302 8208 2.734175 GCTGTGGACGATATGTGAACGA 60.734 50.000 0.00 0.00 0.00 3.85
7303 8209 1.588404 GCTGTGGACGATATGTGAACG 59.412 52.381 0.00 0.00 0.00 3.95
7304 8210 1.933853 GGCTGTGGACGATATGTGAAC 59.066 52.381 0.00 0.00 0.00 3.18
7305 8211 1.134521 GGGCTGTGGACGATATGTGAA 60.135 52.381 0.00 0.00 0.00 3.18
7306 8212 0.464036 GGGCTGTGGACGATATGTGA 59.536 55.000 0.00 0.00 0.00 3.58
7307 8213 0.177836 TGGGCTGTGGACGATATGTG 59.822 55.000 0.00 0.00 0.00 3.21
7308 8214 1.070758 GATGGGCTGTGGACGATATGT 59.929 52.381 0.00 0.00 0.00 2.29
7309 8215 1.800805 GATGGGCTGTGGACGATATG 58.199 55.000 0.00 0.00 0.00 1.78
7310 8216 0.318441 CGATGGGCTGTGGACGATAT 59.682 55.000 0.00 0.00 0.00 1.63
7311 8217 1.040893 ACGATGGGCTGTGGACGATA 61.041 55.000 0.00 0.00 0.00 2.92
7312 8218 2.359169 ACGATGGGCTGTGGACGAT 61.359 57.895 0.00 0.00 0.00 3.73
7313 8219 2.994995 ACGATGGGCTGTGGACGA 60.995 61.111 0.00 0.00 0.00 4.20
7314 8220 2.815211 CACGATGGGCTGTGGACG 60.815 66.667 0.00 0.00 32.47 4.79
7315 8221 2.034879 CACACGATGGGCTGTGGAC 61.035 63.158 0.00 0.00 40.39 4.02
7316 8222 1.188871 TACACACGATGGGCTGTGGA 61.189 55.000 8.44 0.00 41.85 4.02
7317 8223 0.107703 ATACACACGATGGGCTGTGG 60.108 55.000 8.44 0.00 41.85 4.17
7318 8224 2.473816 CTATACACACGATGGGCTGTG 58.526 52.381 2.62 2.62 42.98 3.66
7319 8225 1.202533 GCTATACACACGATGGGCTGT 60.203 52.381 0.00 0.00 0.00 4.40
7320 8226 1.202521 TGCTATACACACGATGGGCTG 60.203 52.381 0.00 0.00 0.00 4.85
7321 8227 1.069204 CTGCTATACACACGATGGGCT 59.931 52.381 0.00 0.00 0.00 5.19
7322 8228 1.502231 CTGCTATACACACGATGGGC 58.498 55.000 0.00 0.00 0.00 5.36
7323 8229 1.502231 GCTGCTATACACACGATGGG 58.498 55.000 0.00 0.00 0.00 4.00
7324 8230 1.131771 CGCTGCTATACACACGATGG 58.868 55.000 0.00 0.00 0.00 3.51
7325 8231 0.504384 GCGCTGCTATACACACGATG 59.496 55.000 0.00 0.00 0.00 3.84
7326 8232 0.385751 AGCGCTGCTATACACACGAT 59.614 50.000 10.39 0.00 36.99 3.73
7327 8233 0.525455 CAGCGCTGCTATACACACGA 60.525 55.000 26.68 0.00 36.40 4.35
7328 8234 0.525455 TCAGCGCTGCTATACACACG 60.525 55.000 32.44 4.42 36.40 4.49
7329 8235 1.858091 ATCAGCGCTGCTATACACAC 58.142 50.000 32.44 0.00 36.40 3.82
7330 8236 2.602257 AATCAGCGCTGCTATACACA 57.398 45.000 32.44 13.24 36.40 3.72
7331 8237 5.006746 ACTTTAAATCAGCGCTGCTATACAC 59.993 40.000 32.44 0.00 36.40 2.90
7332 8238 5.116180 ACTTTAAATCAGCGCTGCTATACA 58.884 37.500 32.44 14.85 36.40 2.29
7333 8239 5.659048 ACTTTAAATCAGCGCTGCTATAC 57.341 39.130 32.44 0.00 36.40 1.47
7334 8240 6.677781 AAACTTTAAATCAGCGCTGCTATA 57.322 33.333 32.44 19.97 36.40 1.31
7335 8241 5.567138 AAACTTTAAATCAGCGCTGCTAT 57.433 34.783 32.44 18.91 36.40 2.97
7336 8242 5.049060 TGAAAACTTTAAATCAGCGCTGCTA 60.049 36.000 32.44 17.30 36.40 3.49
7337 8243 3.923017 AAACTTTAAATCAGCGCTGCT 57.077 38.095 32.44 21.36 40.77 4.24
7338 8244 3.980775 TGAAAACTTTAAATCAGCGCTGC 59.019 39.130 32.44 13.71 0.00 5.25
7339 8245 7.975866 ATATGAAAACTTTAAATCAGCGCTG 57.024 32.000 31.53 31.53 0.00 5.18
7351 8257 9.255029 ACCCTTGTGCTTATATATGAAAACTTT 57.745 29.630 0.00 0.00 0.00 2.66
7352 8258 8.823220 ACCCTTGTGCTTATATATGAAAACTT 57.177 30.769 0.00 0.00 0.00 2.66
7353 8259 9.914834 TTACCCTTGTGCTTATATATGAAAACT 57.085 29.630 0.00 0.00 0.00 2.66
7354 8260 9.946165 GTTACCCTTGTGCTTATATATGAAAAC 57.054 33.333 0.00 0.00 0.00 2.43
7355 8261 9.688091 TGTTACCCTTGTGCTTATATATGAAAA 57.312 29.630 0.00 0.00 0.00 2.29
7356 8262 9.688091 TTGTTACCCTTGTGCTTATATATGAAA 57.312 29.630 0.00 0.00 0.00 2.69
7357 8263 9.116067 GTTGTTACCCTTGTGCTTATATATGAA 57.884 33.333 0.00 0.00 0.00 2.57
7358 8264 7.717875 GGTTGTTACCCTTGTGCTTATATATGA 59.282 37.037 0.00 0.00 38.60 2.15
7359 8265 7.719633 AGGTTGTTACCCTTGTGCTTATATATG 59.280 37.037 0.00 0.00 46.28 1.78
7360 8266 7.812306 AGGTTGTTACCCTTGTGCTTATATAT 58.188 34.615 0.00 0.00 46.28 0.86
7361 8267 7.202972 AGGTTGTTACCCTTGTGCTTATATA 57.797 36.000 0.00 0.00 46.28 0.86
7362 8268 6.074698 AGGTTGTTACCCTTGTGCTTATAT 57.925 37.500 0.00 0.00 46.28 0.86
7363 8269 5.508280 AGGTTGTTACCCTTGTGCTTATA 57.492 39.130 0.00 0.00 46.28 0.98
7364 8270 4.382386 AGGTTGTTACCCTTGTGCTTAT 57.618 40.909 0.00 0.00 46.28 1.73
7365 8271 3.868619 AGGTTGTTACCCTTGTGCTTA 57.131 42.857 0.00 0.00 46.28 3.09
7366 8272 2.748209 AGGTTGTTACCCTTGTGCTT 57.252 45.000 0.00 0.00 46.28 3.91
7367 8273 2.748209 AAGGTTGTTACCCTTGTGCT 57.252 45.000 0.00 0.00 46.28 4.40
7372 8278 5.366482 AAATTTGCAAGGTTGTTACCCTT 57.634 34.783 0.00 0.00 46.28 3.95
7373 8279 6.680148 ATAAATTTGCAAGGTTGTTACCCT 57.320 33.333 0.00 0.00 46.28 4.34
7374 8280 7.011016 GCATATAAATTTGCAAGGTTGTTACCC 59.989 37.037 0.00 0.00 40.78 3.69
7375 8281 7.547370 TGCATATAAATTTGCAAGGTTGTTACC 59.453 33.333 0.00 0.00 45.30 2.85
7376 8282 8.472683 TGCATATAAATTTGCAAGGTTGTTAC 57.527 30.769 0.00 0.00 45.30 2.50
7394 8300 8.409371 GCTGTAGATGCTCTTACTATGCATATA 58.591 37.037 6.92 0.00 45.90 0.86
7395 8301 7.264221 GCTGTAGATGCTCTTACTATGCATAT 58.736 38.462 6.92 0.64 45.90 1.78
7396 8302 6.350528 GGCTGTAGATGCTCTTACTATGCATA 60.351 42.308 6.20 6.20 45.90 3.14
7398 8304 4.262207 GGCTGTAGATGCTCTTACTATGCA 60.262 45.833 0.00 0.00 41.13 3.96
7399 8305 4.241681 GGCTGTAGATGCTCTTACTATGC 58.758 47.826 0.00 0.00 0.00 3.14
7400 8306 4.480541 CGGCTGTAGATGCTCTTACTATG 58.519 47.826 0.00 0.00 0.00 2.23
7401 8307 3.508012 CCGGCTGTAGATGCTCTTACTAT 59.492 47.826 0.00 0.00 0.00 2.12
7402 8308 2.885266 CCGGCTGTAGATGCTCTTACTA 59.115 50.000 0.00 0.00 0.00 1.82
7441 8347 1.375396 CATCCGGTGGCGTTTGAGA 60.375 57.895 0.00 0.00 0.00 3.27
7478 8384 0.831711 ACAACATTTGAGGGGTGCCC 60.832 55.000 0.00 0.00 45.90 5.36
7497 8403 1.451207 GGTATGTGGATGTGCGGCA 60.451 57.895 0.00 0.00 0.00 5.69
7509 8415 5.984725 TGAGAATCGGTATTTGTGGTATGT 58.015 37.500 0.00 0.00 38.61 2.29
7516 8422 8.924511 ATATGGATTTGAGAATCGGTATTTGT 57.075 30.769 0.00 0.00 42.12 2.83
7522 8428 7.689299 TGGATTATATGGATTTGAGAATCGGT 58.311 34.615 0.00 0.00 42.12 4.69
7524 8430 8.127327 GCATGGATTATATGGATTTGAGAATCG 58.873 37.037 0.00 0.00 42.12 3.34
7528 8434 7.891712 ACATGCATGGATTATATGGATTTGAGA 59.108 33.333 29.41 0.00 34.87 3.27
7540 8446 5.521372 CGTATGATCGACATGCATGGATTAT 59.479 40.000 29.41 23.54 40.70 1.28
7541 8447 4.864247 CGTATGATCGACATGCATGGATTA 59.136 41.667 29.41 19.21 40.70 1.75
7545 8451 2.676076 TCGTATGATCGACATGCATGG 58.324 47.619 29.41 13.66 40.70 3.66
7546 8452 4.858692 TGTATCGTATGATCGACATGCATG 59.141 41.667 25.09 25.09 42.56 4.06
7552 8458 5.886992 ACAGTTTGTATCGTATGATCGACA 58.113 37.500 0.00 0.00 42.56 4.35
7563 8469 3.684305 TGGCATTCAGACAGTTTGTATCG 59.316 43.478 0.00 0.00 0.00 2.92
7564 8470 5.627499 TTGGCATTCAGACAGTTTGTATC 57.373 39.130 0.00 0.00 35.94 2.24
7565 8471 5.536161 ACTTTGGCATTCAGACAGTTTGTAT 59.464 36.000 0.00 0.00 35.94 2.29
7601 8507 8.414173 CGGTTCGTTGAACTATAATTTGTTTTG 58.586 33.333 9.32 0.00 41.70 2.44
7605 8511 7.041916 TGTTCGGTTCGTTGAACTATAATTTGT 60.042 33.333 9.32 0.00 43.73 2.83
7611 8517 4.865925 CCATGTTCGGTTCGTTGAACTATA 59.134 41.667 9.32 0.00 43.73 1.31
7622 8528 3.296322 TCATTTTGCCATGTTCGGTTC 57.704 42.857 0.00 0.00 0.00 3.62
7626 8532 5.842619 TTGATTTCATTTTGCCATGTTCG 57.157 34.783 0.00 0.00 0.00 3.95
7628 8534 6.149807 GGACATTGATTTCATTTTGCCATGTT 59.850 34.615 0.00 0.00 0.00 2.71
7635 8541 5.404946 AGCTCGGACATTGATTTCATTTTG 58.595 37.500 0.00 0.00 0.00 2.44
7658 8564 2.028125 GATCCGAGGCCATCCGTCAA 62.028 60.000 5.01 0.00 37.47 3.18
7662 8568 2.029666 GTGATCCGAGGCCATCCG 59.970 66.667 5.01 5.25 37.47 4.18
7744 8698 1.599047 CAAGAGGTCCGGATGCAGT 59.401 57.895 7.81 0.00 0.00 4.40
7746 8700 2.268920 GCAAGAGGTCCGGATGCA 59.731 61.111 19.60 0.00 37.00 3.96
7767 9745 1.048601 AGAAGAAGACCAAGACGCCA 58.951 50.000 0.00 0.00 0.00 5.69
7768 9746 2.070028 GAAGAAGAAGACCAAGACGCC 58.930 52.381 0.00 0.00 0.00 5.68
7832 9810 1.134098 AGTATGAATTGGAGGCCACCG 60.134 52.381 15.06 0.00 30.78 4.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.