Multiple sequence alignment - TraesCS5D01G191600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G191600 chr5D 100.000 5429 0 0 1 5429 294429059 294423631 0.000000e+00 10026.0
1 TraesCS5D01G191600 chr5D 88.710 62 5 2 96 157 246337246 246337305 2.100000e-09 75.0
2 TraesCS5D01G191600 chr5A 93.053 2850 124 29 127 2942 387409539 387406730 0.000000e+00 4098.0
3 TraesCS5D01G191600 chr5A 95.155 1486 59 11 3110 4589 387406724 387405246 0.000000e+00 2333.0
4 TraesCS5D01G191600 chr5A 92.665 818 36 11 4627 5429 387405247 387404439 0.000000e+00 1157.0
5 TraesCS5D01G191600 chr5B 93.275 1844 47 22 931 2732 335951610 335949802 0.000000e+00 2647.0
6 TraesCS5D01G191600 chr5B 93.792 1482 45 14 3110 4590 335949633 335948198 0.000000e+00 2183.0
7 TraesCS5D01G191600 chr5B 89.845 837 39 20 4630 5429 335948200 335947373 0.000000e+00 1033.0
8 TraesCS5D01G191600 chr5B 93.678 174 0 2 2769 2942 335949801 335949639 3.250000e-62 250.0
9 TraesCS5D01G191600 chr5B 87.624 202 21 4 2939 3136 377190528 377190327 1.180000e-56 231.0
10 TraesCS5D01G191600 chr5B 92.857 84 6 0 1 84 249297732 249297815 7.380000e-24 122.0
11 TraesCS5D01G191600 chr5B 97.619 42 1 0 4588 4629 248393531 248393490 7.540000e-09 73.1
12 TraesCS5D01G191600 chr1D 94.253 174 10 0 2939 3112 370334946 370335119 3.220000e-67 267.0
13 TraesCS5D01G191600 chr2B 93.714 175 11 0 2940 3114 153163285 153163459 4.170000e-66 263.0
14 TraesCS5D01G191600 chr2B 92.941 85 4 2 1 84 403231194 403231277 7.380000e-24 122.0
15 TraesCS5D01G191600 chr2B 91.837 49 3 1 4580 4628 123084977 123085024 3.510000e-07 67.6
16 TraesCS5D01G191600 chr2B 92.500 40 1 2 119 158 703662663 703662700 7.600000e-04 56.5
17 TraesCS5D01G191600 chr3A 93.642 173 11 0 2939 3111 43639522 43639694 5.390000e-65 259.0
18 TraesCS5D01G191600 chr3A 93.064 173 12 0 2939 3111 43016274 43016446 2.510000e-63 254.0
19 TraesCS5D01G191600 chr3A 92.982 171 12 0 2939 3109 559603713 559603543 3.250000e-62 250.0
20 TraesCS5D01G191600 chr7D 93.023 172 12 0 2939 3110 179526529 179526700 9.030000e-63 252.0
21 TraesCS5D01G191600 chr7D 98.630 73 1 0 1 73 479425853 479425925 4.410000e-26 130.0
22 TraesCS5D01G191600 chr7B 93.023 172 12 0 2940 3111 7746572 7746743 9.030000e-63 252.0
23 TraesCS5D01G191600 chr7B 74.086 301 50 18 273 556 412814762 412815051 1.240000e-16 99.0
24 TraesCS5D01G191600 chr4B 90.860 186 14 3 2939 3124 481491398 481491216 4.200000e-61 246.0
25 TraesCS5D01G191600 chr4B 97.619 42 1 0 4588 4629 443959846 443959805 7.540000e-09 73.1
26 TraesCS5D01G191600 chr1B 97.468 79 1 1 1 79 327314364 327314441 3.410000e-27 134.0
27 TraesCS5D01G191600 chr2D 98.630 73 1 0 1 73 343169438 343169366 4.410000e-26 130.0
28 TraesCS5D01G191600 chr2D 93.182 44 3 0 4585 4628 91426560 91426603 1.260000e-06 65.8
29 TraesCS5D01G191600 chr2D 89.130 46 4 1 116 160 23730876 23730921 7.600000e-04 56.5
30 TraesCS5D01G191600 chr2A 95.062 81 3 1 1 80 189609100 189609020 5.710000e-25 126.0
31 TraesCS5D01G191600 chr4A 91.304 92 6 2 1 91 76411300 76411390 2.050000e-24 124.0
32 TraesCS5D01G191600 chr4A 90.217 92 7 2 1 91 617250354 617250264 9.550000e-23 119.0
33 TraesCS5D01G191600 chr6A 91.209 91 6 2 1 89 554123866 554123776 7.380000e-24 122.0
34 TraesCS5D01G191600 chr7A 83.186 113 15 4 666 777 657709284 657709175 3.460000e-17 100.0
35 TraesCS5D01G191600 chr6B 95.652 46 1 1 4585 4629 552503927 552503882 7.540000e-09 73.1
36 TraesCS5D01G191600 chr6B 95.238 42 2 0 4588 4629 184009862 184009903 3.510000e-07 67.6
37 TraesCS5D01G191600 chr4D 85.135 74 8 3 96 167 63956899 63956971 7.540000e-09 73.1
38 TraesCS5D01G191600 chr4D 92.683 41 3 0 117 157 455838042 455838082 5.870000e-05 60.2
39 TraesCS5D01G191600 chr3B 97.619 42 1 0 4588 4629 794347672 794347631 7.540000e-09 73.1
40 TraesCS5D01G191600 chr3B 97.561 41 1 0 4588 4628 557174633 557174673 2.710000e-08 71.3
41 TraesCS5D01G191600 chr6D 95.122 41 2 0 4588 4628 251235129 251235089 1.260000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G191600 chr5D 294423631 294429059 5428 True 10026.000000 10026 100.000000 1 5429 1 chr5D.!!$R1 5428
1 TraesCS5D01G191600 chr5A 387404439 387409539 5100 True 2529.333333 4098 93.624333 127 5429 3 chr5A.!!$R1 5302
2 TraesCS5D01G191600 chr5B 335947373 335951610 4237 True 1528.250000 2647 92.647500 931 5429 4 chr5B.!!$R3 4498

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
123 124 0.038159 CGGACAAGTCTGGACCAGTC 60.038 60.000 21.06 15.67 35.9 3.51 F
857 860 0.110238 CACGTGCGGACATTTTGAGG 60.110 55.000 8.11 0.00 0.0 3.86 F
1205 1227 0.460987 CACCACCGAGAAGCAGGATC 60.461 60.000 0.00 0.00 0.0 3.36 F
1868 1939 1.076332 GTCCCTGTGTGCATAACGTC 58.924 55.000 0.00 0.00 0.0 4.34 F
2951 3025 1.134159 GCATGGATCAAGCTCAGAGGT 60.134 52.381 0.00 0.00 0.0 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2103 2175 1.329906 GCATGCTGTCGGATCAAGAAG 59.670 52.381 11.37 0.00 0.00 2.85 R
2760 2833 6.045955 GGCAAGAACTAACAATTCCACAAAA 58.954 36.000 0.00 0.00 0.00 2.44 R
2998 3072 0.166814 CAGAACGCTAGCCTTTGCAC 59.833 55.000 9.66 0.00 41.13 4.57 R
3000 3074 1.135523 GCAGAACGCTAGCCTTTGC 59.864 57.895 9.66 9.97 37.77 3.68 R
4689 4769 0.912486 GGGGAACACTCCAGCACTAT 59.088 55.000 0.00 0.00 44.51 2.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 5.657826 TGCATCTCCTAGATAGATCTTGC 57.342 43.478 0.00 0.69 38.32 4.01
25 26 4.157472 TGCATCTCCTAGATAGATCTTGCG 59.843 45.833 0.00 0.00 36.48 4.85
26 27 4.157656 GCATCTCCTAGATAGATCTTGCGT 59.842 45.833 0.00 0.00 38.32 5.24
27 28 5.639757 CATCTCCTAGATAGATCTTGCGTG 58.360 45.833 0.00 0.00 38.32 5.34
28 29 4.974399 TCTCCTAGATAGATCTTGCGTGA 58.026 43.478 0.00 0.00 38.32 4.35
29 30 5.565509 TCTCCTAGATAGATCTTGCGTGAT 58.434 41.667 0.00 0.00 38.32 3.06
30 31 5.645929 TCTCCTAGATAGATCTTGCGTGATC 59.354 44.000 0.00 9.82 42.18 2.92
31 32 4.393371 TCCTAGATAGATCTTGCGTGATCG 59.607 45.833 0.00 0.00 45.35 3.69
32 33 4.155099 CCTAGATAGATCTTGCGTGATCGT 59.845 45.833 0.00 6.35 45.35 3.73
33 34 5.351740 CCTAGATAGATCTTGCGTGATCGTA 59.648 44.000 0.00 6.70 45.35 3.43
34 35 5.289917 AGATAGATCTTGCGTGATCGTAG 57.710 43.478 0.00 0.00 45.35 3.51
35 36 2.783828 AGATCTTGCGTGATCGTAGG 57.216 50.000 11.44 0.00 45.35 3.18
36 37 2.298610 AGATCTTGCGTGATCGTAGGA 58.701 47.619 11.44 0.00 45.35 2.94
37 38 2.688446 AGATCTTGCGTGATCGTAGGAA 59.312 45.455 11.44 0.00 45.35 3.36
38 39 3.130516 AGATCTTGCGTGATCGTAGGAAA 59.869 43.478 11.44 0.00 45.35 3.13
39 40 3.520290 TCTTGCGTGATCGTAGGAAAT 57.480 42.857 0.00 0.00 35.34 2.17
40 41 3.857052 TCTTGCGTGATCGTAGGAAATT 58.143 40.909 0.00 0.00 35.34 1.82
41 42 4.250464 TCTTGCGTGATCGTAGGAAATTT 58.750 39.130 0.00 0.00 35.34 1.82
42 43 4.693566 TCTTGCGTGATCGTAGGAAATTTT 59.306 37.500 0.00 0.00 35.34 1.82
43 44 5.180492 TCTTGCGTGATCGTAGGAAATTTTT 59.820 36.000 0.00 0.00 35.34 1.94
61 62 3.980646 TTTTGAAGTTGCATGCTACGT 57.019 38.095 23.33 21.23 0.00 3.57
62 63 3.980646 TTTGAAGTTGCATGCTACGTT 57.019 38.095 23.33 17.90 0.00 3.99
63 64 3.536158 TTGAAGTTGCATGCTACGTTC 57.464 42.857 23.33 23.48 0.00 3.95
64 65 1.804151 TGAAGTTGCATGCTACGTTCC 59.196 47.619 23.33 14.93 0.00 3.62
65 66 1.130561 GAAGTTGCATGCTACGTTCCC 59.869 52.381 23.33 7.88 0.00 3.97
66 67 0.676782 AGTTGCATGCTACGTTCCCC 60.677 55.000 23.33 1.50 0.00 4.81
67 68 0.958382 GTTGCATGCTACGTTCCCCA 60.958 55.000 20.33 0.00 0.00 4.96
68 69 0.250945 TTGCATGCTACGTTCCCCAA 60.251 50.000 20.33 0.00 0.00 4.12
69 70 0.958382 TGCATGCTACGTTCCCCAAC 60.958 55.000 20.33 0.00 0.00 3.77
70 71 0.958382 GCATGCTACGTTCCCCAACA 60.958 55.000 11.37 0.00 32.14 3.33
71 72 1.529226 CATGCTACGTTCCCCAACAA 58.471 50.000 0.00 0.00 32.14 2.83
72 73 1.199097 CATGCTACGTTCCCCAACAAC 59.801 52.381 0.00 0.00 32.14 3.32
73 74 0.535553 TGCTACGTTCCCCAACAACC 60.536 55.000 0.00 0.00 32.14 3.77
74 75 0.535553 GCTACGTTCCCCAACAACCA 60.536 55.000 0.00 0.00 32.14 3.67
75 76 1.884928 GCTACGTTCCCCAACAACCAT 60.885 52.381 0.00 0.00 32.14 3.55
76 77 2.510613 CTACGTTCCCCAACAACCATT 58.489 47.619 0.00 0.00 32.14 3.16
77 78 2.660670 ACGTTCCCCAACAACCATTA 57.339 45.000 0.00 0.00 32.14 1.90
78 79 2.232399 ACGTTCCCCAACAACCATTAC 58.768 47.619 0.00 0.00 32.14 1.89
79 80 1.542472 CGTTCCCCAACAACCATTACC 59.458 52.381 0.00 0.00 32.14 2.85
80 81 2.816337 CGTTCCCCAACAACCATTACCT 60.816 50.000 0.00 0.00 32.14 3.08
81 82 3.559597 CGTTCCCCAACAACCATTACCTA 60.560 47.826 0.00 0.00 32.14 3.08
82 83 4.409187 GTTCCCCAACAACCATTACCTAA 58.591 43.478 0.00 0.00 32.14 2.69
83 84 4.743705 TCCCCAACAACCATTACCTAAA 57.256 40.909 0.00 0.00 0.00 1.85
84 85 5.076057 TCCCCAACAACCATTACCTAAAA 57.924 39.130 0.00 0.00 0.00 1.52
85 86 5.656420 TCCCCAACAACCATTACCTAAAAT 58.344 37.500 0.00 0.00 0.00 1.82
86 87 5.482175 TCCCCAACAACCATTACCTAAAATG 59.518 40.000 0.00 0.00 36.74 2.32
98 99 8.964476 CATTACCTAAAATGGACACACTATCT 57.036 34.615 0.00 0.00 33.95 1.98
99 100 8.830580 CATTACCTAAAATGGACACACTATCTG 58.169 37.037 0.00 0.00 33.95 2.90
100 101 5.186198 ACCTAAAATGGACACACTATCTGC 58.814 41.667 0.00 0.00 0.00 4.26
101 102 4.576463 CCTAAAATGGACACACTATCTGCC 59.424 45.833 0.00 0.00 0.00 4.85
102 103 2.717639 AATGGACACACTATCTGCCC 57.282 50.000 0.00 0.00 0.00 5.36
103 104 0.465705 ATGGACACACTATCTGCCCG 59.534 55.000 0.00 0.00 0.00 6.13
104 105 1.521681 GGACACACTATCTGCCCGC 60.522 63.158 0.00 0.00 0.00 6.13
105 106 1.878522 GACACACTATCTGCCCGCG 60.879 63.158 0.00 0.00 0.00 6.46
106 107 2.586079 CACACTATCTGCCCGCGG 60.586 66.667 21.04 21.04 0.00 6.46
107 108 2.758327 ACACTATCTGCCCGCGGA 60.758 61.111 30.73 6.75 35.60 5.54
108 109 2.279517 CACTATCTGCCCGCGGAC 60.280 66.667 30.73 18.13 33.73 4.79
109 110 2.758327 ACTATCTGCCCGCGGACA 60.758 61.111 30.73 22.82 33.73 4.02
110 111 2.355986 ACTATCTGCCCGCGGACAA 61.356 57.895 30.73 12.90 33.73 3.18
111 112 1.592669 CTATCTGCCCGCGGACAAG 60.593 63.158 30.73 20.40 33.73 3.16
112 113 2.298158 CTATCTGCCCGCGGACAAGT 62.298 60.000 30.73 15.22 33.73 3.16
113 114 2.292794 TATCTGCCCGCGGACAAGTC 62.293 60.000 30.73 8.58 33.73 3.01
114 115 4.379243 CTGCCCGCGGACAAGTCT 62.379 66.667 30.73 0.00 0.00 3.24
115 116 4.680237 TGCCCGCGGACAAGTCTG 62.680 66.667 30.73 8.26 38.96 3.51
117 118 3.691342 CCCGCGGACAAGTCTGGA 61.691 66.667 30.73 0.00 36.50 3.86
118 119 2.432628 CCGCGGACAAGTCTGGAC 60.433 66.667 24.07 0.00 36.50 4.02
119 120 2.432628 CGCGGACAAGTCTGGACC 60.433 66.667 10.77 0.00 36.50 4.46
120 121 2.741092 GCGGACAAGTCTGGACCA 59.259 61.111 10.77 0.00 36.50 4.02
121 122 1.374758 GCGGACAAGTCTGGACCAG 60.375 63.158 15.99 15.99 36.50 4.00
122 123 2.050269 CGGACAAGTCTGGACCAGT 58.950 57.895 21.06 1.84 32.61 4.00
123 124 0.038159 CGGACAAGTCTGGACCAGTC 60.038 60.000 21.06 15.67 35.90 3.51
124 125 1.343069 GGACAAGTCTGGACCAGTCT 58.657 55.000 21.06 17.77 36.48 3.24
125 126 1.001406 GGACAAGTCTGGACCAGTCTG 59.999 57.143 20.11 17.02 36.48 3.51
132 133 2.048127 GGACCAGTCTGCGGACAC 60.048 66.667 27.02 14.38 44.36 3.67
148 149 4.148825 ACAGATGCGGGAGTCGGC 62.149 66.667 0.00 0.00 39.69 5.54
169 170 3.252458 GCCATCCAACGTATCCCATAAAC 59.748 47.826 0.00 0.00 0.00 2.01
213 214 7.599630 ATTTCATTTCAAACGCATAGCAATT 57.400 28.000 0.00 0.00 0.00 2.32
253 254 2.993220 GCAATACGACACATGTCTGACA 59.007 45.455 13.60 13.60 42.66 3.58
282 283 0.527817 GTGGATTACCGACCGAGCTG 60.528 60.000 0.00 0.00 39.42 4.24
318 319 6.143915 AGAAGTAGGGAGGTTGATATTGCTA 58.856 40.000 0.00 0.00 0.00 3.49
319 320 6.789959 AGAAGTAGGGAGGTTGATATTGCTAT 59.210 38.462 0.00 0.00 0.00 2.97
332 333 1.496444 TTGCTATGGACAGGGTGGCA 61.496 55.000 0.00 0.00 0.00 4.92
337 338 1.792757 ATGGACAGGGTGGCATGTGT 61.793 55.000 0.00 0.00 0.00 3.72
354 355 1.133598 GTGTATGGACGACGATGGTGA 59.866 52.381 0.00 0.00 0.00 4.02
358 359 1.513586 GGACGACGATGGTGACGAC 60.514 63.158 0.00 0.00 34.70 4.34
423 424 0.387565 TTGCCGCCCTTCTTTTTGTC 59.612 50.000 0.00 0.00 0.00 3.18
428 429 1.460273 GCCCTTCTTTTTGTCGGCCA 61.460 55.000 2.24 0.00 0.00 5.36
445 446 1.351076 CCACCCCATCTTTTGCCTTT 58.649 50.000 0.00 0.00 0.00 3.11
446 447 1.002315 CCACCCCATCTTTTGCCTTTG 59.998 52.381 0.00 0.00 0.00 2.77
511 512 0.461961 CGGACACCTTCTCCAGATCC 59.538 60.000 0.00 0.00 0.00 3.36
538 539 3.859414 GCCGGCTCCAGCAGATCT 61.859 66.667 22.15 0.00 44.36 2.75
540 541 1.227497 CCGGCTCCAGCAGATCTTC 60.227 63.158 0.03 0.00 44.36 2.87
544 545 1.537135 GGCTCCAGCAGATCTTCGTAC 60.537 57.143 0.03 0.00 44.36 3.67
584 585 1.228657 GCGAAAAGTGCGAGAAGGGT 61.229 55.000 0.00 0.00 0.00 4.34
590 591 0.904865 AGTGCGAGAAGGGTGGATGA 60.905 55.000 0.00 0.00 0.00 2.92
591 592 0.179000 GTGCGAGAAGGGTGGATGAT 59.821 55.000 0.00 0.00 0.00 2.45
592 593 0.178767 TGCGAGAAGGGTGGATGATG 59.821 55.000 0.00 0.00 0.00 3.07
600 602 2.320587 GGTGGATGATGCGGCGATC 61.321 63.158 12.98 11.62 0.00 3.69
601 603 1.595109 GTGGATGATGCGGCGATCA 60.595 57.895 12.98 17.09 36.78 2.92
607 609 4.957684 ATGCGGCGATCAGAGCGG 62.958 66.667 12.98 0.00 37.88 5.52
625 627 1.544151 GAGAGGGGGAGGGGGTTTT 60.544 63.158 0.00 0.00 0.00 2.43
629 631 3.922364 GGGGAGGGGGTTTTGGCA 61.922 66.667 0.00 0.00 0.00 4.92
688 691 1.363807 GTTTTGTGTGGGCTGAGGC 59.636 57.895 0.00 0.00 37.82 4.70
690 693 1.108727 TTTTGTGTGGGCTGAGGCTG 61.109 55.000 5.84 0.00 38.73 4.85
707 710 0.447011 CTGTCGGAGTCCTACGTGTC 59.553 60.000 7.77 0.00 38.28 3.67
708 711 1.293963 TGTCGGAGTCCTACGTGTCG 61.294 60.000 7.77 0.00 38.28 4.35
746 749 0.694105 AAAGCCCCCTGGTTTGCTTT 60.694 50.000 16.74 16.74 46.18 3.51
754 757 1.136110 CCTGGTTTGCTTTCGGTTTGT 59.864 47.619 0.00 0.00 0.00 2.83
793 796 3.003897 GGACTCGTTGCCAACAAATACAA 59.996 43.478 8.51 0.00 37.58 2.41
797 800 2.412870 GTTGCCAACAAATACAAGCCC 58.587 47.619 1.91 0.00 37.58 5.19
803 806 3.049206 CAACAAATACAAGCCCGTGTTG 58.951 45.455 0.00 0.00 39.69 3.33
808 811 0.398696 TACAAGCCCGTGTTGGATGT 59.601 50.000 0.00 0.00 42.00 3.06
826 829 2.293170 TGTCTTGCAACATCCGAACAA 58.707 42.857 0.00 0.00 0.00 2.83
839 842 3.277652 GAACAAGTCGGTTCGGACA 57.722 52.632 11.79 0.00 37.96 4.02
840 843 0.857287 GAACAAGTCGGTTCGGACAC 59.143 55.000 11.79 0.00 37.96 3.67
847 850 4.651008 GGTTCGGACACGTGCGGA 62.651 66.667 17.22 14.80 44.66 5.54
848 851 3.400590 GTTCGGACACGTGCGGAC 61.401 66.667 17.22 13.35 45.17 4.79
849 852 3.902086 TTCGGACACGTGCGGACA 61.902 61.111 17.22 6.83 44.66 4.02
857 860 0.110238 CACGTGCGGACATTTTGAGG 60.110 55.000 8.11 0.00 0.00 3.86
858 861 1.154225 CGTGCGGACATTTTGAGGC 60.154 57.895 8.11 0.00 0.00 4.70
863 866 1.803289 GGACATTTTGAGGCTCCGC 59.197 57.895 12.86 0.00 0.00 5.54
864 867 1.425428 GACATTTTGAGGCTCCGCG 59.575 57.895 12.86 0.00 0.00 6.46
886 889 4.396166 CGTTGGAGATGACCTTAGCAAAAT 59.604 41.667 0.00 0.00 0.00 1.82
935 938 6.332735 AGCTTTGTTTTTCTAGGGTCATTC 57.667 37.500 0.00 0.00 0.00 2.67
982 985 8.623903 ACTCTATTATTACGTTGTTGTATCCGA 58.376 33.333 0.00 0.00 0.00 4.55
983 986 9.622004 CTCTATTATTACGTTGTTGTATCCGAT 57.378 33.333 0.00 0.00 0.00 4.18
988 991 7.647907 ATTACGTTGTTGTATCCGATATTCC 57.352 36.000 0.00 0.00 0.00 3.01
989 992 4.046462 ACGTTGTTGTATCCGATATTCCG 58.954 43.478 0.00 0.00 0.00 4.30
1016 1019 6.609212 TGTTCTCTCCTCTGATATAAGCAAGT 59.391 38.462 0.00 0.00 0.00 3.16
1088 1107 7.127032 CAGGAGAGCTTATGAAAGGGGATATAT 59.873 40.741 0.00 0.00 32.98 0.86
1089 1108 8.355256 AGGAGAGCTTATGAAAGGGGATATATA 58.645 37.037 0.00 0.00 32.98 0.86
1168 1187 2.615288 CTCCCCCAAAGCCCTCCT 60.615 66.667 0.00 0.00 0.00 3.69
1170 1189 3.744155 CCCCCAAAGCCCTCCTCC 61.744 72.222 0.00 0.00 0.00 4.30
1171 1190 2.941025 CCCCAAAGCCCTCCTCCA 60.941 66.667 0.00 0.00 0.00 3.86
1205 1227 0.460987 CACCACCGAGAAGCAGGATC 60.461 60.000 0.00 0.00 0.00 3.36
1332 1354 1.378514 TTTCTGCTTGATCCGCCCC 60.379 57.895 2.13 0.00 0.00 5.80
1476 1498 4.019174 GTGTGATGGGAATGGATTCTTGT 58.981 43.478 0.00 0.00 37.00 3.16
1477 1499 4.096984 GTGTGATGGGAATGGATTCTTGTC 59.903 45.833 0.00 0.00 37.00 3.18
1614 1649 3.699538 GCCTTCGTGGAAAGGGATTATTT 59.300 43.478 4.93 0.00 45.07 1.40
1828 1899 3.195661 GGCGACAGGAGTGTAAATTAGG 58.804 50.000 0.00 0.00 36.88 2.69
1832 1903 4.868734 CGACAGGAGTGTAAATTAGGTTCC 59.131 45.833 0.00 0.00 36.88 3.62
1868 1939 1.076332 GTCCCTGTGTGCATAACGTC 58.924 55.000 0.00 0.00 0.00 4.34
1872 1943 1.608025 CCTGTGTGCATAACGTCTGGT 60.608 52.381 0.00 0.00 0.00 4.00
1878 1949 3.445805 TGTGCATAACGTCTGGTAGATGA 59.554 43.478 5.14 0.00 34.89 2.92
1920 1991 8.029642 ACTTCGTTAATCATAGTTTGGTGAAG 57.970 34.615 0.00 0.00 35.35 3.02
1944 2015 3.430098 GGAGGTCATGATCAGTGAGTGTC 60.430 52.174 9.06 0.00 0.00 3.67
2103 2175 4.266029 CAGTTTCTTGTGTGTGACAAATGC 59.734 41.667 0.00 0.00 44.14 3.56
2151 2223 1.398041 TGCTTTGCTACATGACGCATC 59.602 47.619 12.90 7.55 35.85 3.91
2208 2280 7.115095 GGAACTAATTAGTTAGCATAGCAGTCG 59.885 40.741 26.80 0.00 45.84 4.18
2619 2692 3.646637 AGGACTAGGTTGTGCTAAACTGT 59.353 43.478 0.00 0.03 36.86 3.55
2623 2696 6.484308 GGACTAGGTTGTGCTAAACTGTTAAA 59.516 38.462 0.00 0.00 0.00 1.52
2628 2701 7.927048 AGGTTGTGCTAAACTGTTAAAAGTAG 58.073 34.615 0.00 0.00 0.00 2.57
2687 2760 5.227569 TGATAAAGAAGGAGCAAGTGACA 57.772 39.130 0.00 0.00 0.00 3.58
2740 2813 5.124457 GTCCTTGTGCATCATATTGTGTCTT 59.876 40.000 0.00 0.00 0.00 3.01
2942 3016 7.822822 TCATCTCATGTAATAGCATGGATCAAG 59.177 37.037 6.26 0.00 44.54 3.02
2943 3017 5.936372 TCTCATGTAATAGCATGGATCAAGC 59.064 40.000 6.26 0.00 44.54 4.01
2944 3018 5.872963 TCATGTAATAGCATGGATCAAGCT 58.127 37.500 10.10 10.10 44.54 3.74
2945 3019 5.936372 TCATGTAATAGCATGGATCAAGCTC 59.064 40.000 8.76 0.00 44.54 4.09
2946 3020 5.294734 TGTAATAGCATGGATCAAGCTCA 57.705 39.130 8.76 0.16 39.21 4.26
2947 3021 5.303165 TGTAATAGCATGGATCAAGCTCAG 58.697 41.667 8.76 0.00 39.21 3.35
2948 3022 4.701651 AATAGCATGGATCAAGCTCAGA 57.298 40.909 8.76 0.00 39.21 3.27
2949 3023 2.623878 AGCATGGATCAAGCTCAGAG 57.376 50.000 0.00 0.00 32.86 3.35
2950 3024 1.141254 AGCATGGATCAAGCTCAGAGG 59.859 52.381 0.00 0.00 32.86 3.69
2951 3025 1.134159 GCATGGATCAAGCTCAGAGGT 60.134 52.381 0.00 0.00 0.00 3.85
2952 3026 2.683152 GCATGGATCAAGCTCAGAGGTT 60.683 50.000 9.18 9.18 36.17 3.50
2953 3027 3.618351 CATGGATCAAGCTCAGAGGTTT 58.382 45.455 12.37 0.00 32.99 3.27
2954 3028 3.340814 TGGATCAAGCTCAGAGGTTTC 57.659 47.619 12.37 8.60 32.99 2.78
2955 3029 2.909006 TGGATCAAGCTCAGAGGTTTCT 59.091 45.455 12.37 2.80 32.99 2.52
2956 3030 3.328931 TGGATCAAGCTCAGAGGTTTCTT 59.671 43.478 12.37 0.48 32.99 2.52
2957 3031 3.938334 GGATCAAGCTCAGAGGTTTCTTC 59.062 47.826 12.37 9.20 32.99 2.87
2958 3032 3.032017 TCAAGCTCAGAGGTTTCTTCG 57.968 47.619 12.37 1.46 32.99 3.79
2959 3033 2.072298 CAAGCTCAGAGGTTTCTTCGG 58.928 52.381 12.37 0.00 32.99 4.30
2960 3034 1.343069 AGCTCAGAGGTTTCTTCGGT 58.657 50.000 0.00 0.00 0.00 4.69
2961 3035 1.273886 AGCTCAGAGGTTTCTTCGGTC 59.726 52.381 0.00 0.00 0.00 4.79
2962 3036 1.273886 GCTCAGAGGTTTCTTCGGTCT 59.726 52.381 0.00 0.00 0.00 3.85
2963 3037 2.289133 GCTCAGAGGTTTCTTCGGTCTT 60.289 50.000 0.00 0.00 0.00 3.01
2964 3038 3.321497 CTCAGAGGTTTCTTCGGTCTTG 58.679 50.000 0.00 0.00 0.00 3.02
2965 3039 2.698797 TCAGAGGTTTCTTCGGTCTTGT 59.301 45.455 0.00 0.00 0.00 3.16
2966 3040 3.134081 TCAGAGGTTTCTTCGGTCTTGTT 59.866 43.478 0.00 0.00 0.00 2.83
2967 3041 3.877508 CAGAGGTTTCTTCGGTCTTGTTT 59.122 43.478 0.00 0.00 0.00 2.83
2968 3042 3.877508 AGAGGTTTCTTCGGTCTTGTTTG 59.122 43.478 0.00 0.00 0.00 2.93
2969 3043 3.617284 AGGTTTCTTCGGTCTTGTTTGT 58.383 40.909 0.00 0.00 0.00 2.83
2970 3044 4.773013 AGGTTTCTTCGGTCTTGTTTGTA 58.227 39.130 0.00 0.00 0.00 2.41
2971 3045 5.187687 AGGTTTCTTCGGTCTTGTTTGTAA 58.812 37.500 0.00 0.00 0.00 2.41
2972 3046 5.826208 AGGTTTCTTCGGTCTTGTTTGTAAT 59.174 36.000 0.00 0.00 0.00 1.89
2973 3047 6.320418 AGGTTTCTTCGGTCTTGTTTGTAATT 59.680 34.615 0.00 0.00 0.00 1.40
2974 3048 6.976349 GGTTTCTTCGGTCTTGTTTGTAATTT 59.024 34.615 0.00 0.00 0.00 1.82
2975 3049 7.490079 GGTTTCTTCGGTCTTGTTTGTAATTTT 59.510 33.333 0.00 0.00 0.00 1.82
2976 3050 9.505995 GTTTCTTCGGTCTTGTTTGTAATTTTA 57.494 29.630 0.00 0.00 0.00 1.52
2977 3051 9.505995 TTTCTTCGGTCTTGTTTGTAATTTTAC 57.494 29.630 0.00 0.00 0.00 2.01
2978 3052 8.441312 TCTTCGGTCTTGTTTGTAATTTTACT 57.559 30.769 2.45 0.00 34.77 2.24
2979 3053 8.895737 TCTTCGGTCTTGTTTGTAATTTTACTT 58.104 29.630 2.45 0.00 34.77 2.24
2980 3054 9.166126 CTTCGGTCTTGTTTGTAATTTTACTTC 57.834 33.333 2.45 0.00 34.77 3.01
2981 3055 8.441312 TCGGTCTTGTTTGTAATTTTACTTCT 57.559 30.769 2.45 0.00 34.77 2.85
2982 3056 8.895737 TCGGTCTTGTTTGTAATTTTACTTCTT 58.104 29.630 2.45 0.00 34.77 2.52
2983 3057 8.953990 CGGTCTTGTTTGTAATTTTACTTCTTG 58.046 33.333 2.45 0.00 34.77 3.02
2984 3058 9.244799 GGTCTTGTTTGTAATTTTACTTCTTGG 57.755 33.333 2.45 0.00 34.77 3.61
2985 3059 8.752254 GTCTTGTTTGTAATTTTACTTCTTGGC 58.248 33.333 2.45 0.00 34.77 4.52
2986 3060 8.691797 TCTTGTTTGTAATTTTACTTCTTGGCT 58.308 29.630 2.45 0.00 34.77 4.75
2987 3061 8.641499 TTGTTTGTAATTTTACTTCTTGGCTG 57.359 30.769 2.45 0.00 34.77 4.85
2988 3062 7.777095 TGTTTGTAATTTTACTTCTTGGCTGT 58.223 30.769 2.45 0.00 34.77 4.40
2989 3063 8.254508 TGTTTGTAATTTTACTTCTTGGCTGTT 58.745 29.630 2.45 0.00 34.77 3.16
2990 3064 8.539674 GTTTGTAATTTTACTTCTTGGCTGTTG 58.460 33.333 2.45 0.00 34.77 3.33
2991 3065 7.341445 TGTAATTTTACTTCTTGGCTGTTGT 57.659 32.000 2.45 0.00 34.77 3.32
2992 3066 7.777095 TGTAATTTTACTTCTTGGCTGTTGTT 58.223 30.769 2.45 0.00 34.77 2.83
2993 3067 7.918562 TGTAATTTTACTTCTTGGCTGTTGTTC 59.081 33.333 2.45 0.00 34.77 3.18
2994 3068 4.911514 TTTACTTCTTGGCTGTTGTTCC 57.088 40.909 0.00 0.00 0.00 3.62
2995 3069 2.736670 ACTTCTTGGCTGTTGTTCCT 57.263 45.000 0.00 0.00 0.00 3.36
2996 3070 3.018423 ACTTCTTGGCTGTTGTTCCTT 57.982 42.857 0.00 0.00 0.00 3.36
2997 3071 3.365472 ACTTCTTGGCTGTTGTTCCTTT 58.635 40.909 0.00 0.00 0.00 3.11
2998 3072 3.131046 ACTTCTTGGCTGTTGTTCCTTTG 59.869 43.478 0.00 0.00 0.00 2.77
2999 3073 2.733956 TCTTGGCTGTTGTTCCTTTGT 58.266 42.857 0.00 0.00 0.00 2.83
3000 3074 2.426738 TCTTGGCTGTTGTTCCTTTGTG 59.573 45.455 0.00 0.00 0.00 3.33
3001 3075 0.459489 TGGCTGTTGTTCCTTTGTGC 59.541 50.000 0.00 0.00 0.00 4.57
3002 3076 0.459489 GGCTGTTGTTCCTTTGTGCA 59.541 50.000 0.00 0.00 0.00 4.57
3003 3077 1.134848 GGCTGTTGTTCCTTTGTGCAA 60.135 47.619 0.00 0.00 0.00 4.08
3004 3078 2.615869 GCTGTTGTTCCTTTGTGCAAA 58.384 42.857 0.00 0.00 0.00 3.68
3005 3079 2.604462 GCTGTTGTTCCTTTGTGCAAAG 59.396 45.455 15.53 15.53 45.47 2.77
3012 3086 3.389741 CTTTGTGCAAAGGCTAGCG 57.610 52.632 9.00 0.00 42.96 4.26
3013 3087 0.593128 CTTTGTGCAAAGGCTAGCGT 59.407 50.000 9.00 6.32 42.96 5.07
3014 3088 1.001378 CTTTGTGCAAAGGCTAGCGTT 60.001 47.619 16.67 16.67 42.96 4.84
3015 3089 0.591170 TTGTGCAAAGGCTAGCGTTC 59.409 50.000 21.95 11.75 41.91 3.95
3016 3090 0.250295 TGTGCAAAGGCTAGCGTTCT 60.250 50.000 21.95 10.33 41.91 3.01
3017 3091 0.166814 GTGCAAAGGCTAGCGTTCTG 59.833 55.000 21.95 20.27 41.91 3.02
3018 3092 1.135523 GCAAAGGCTAGCGTTCTGC 59.864 57.895 26.14 26.14 39.86 4.26
3030 3104 3.813529 GCGTTCTGCTATTTGTTCAGT 57.186 42.857 0.00 0.00 41.73 3.41
3031 3105 4.147219 GCGTTCTGCTATTTGTTCAGTT 57.853 40.909 0.00 0.00 41.73 3.16
3032 3106 4.537015 GCGTTCTGCTATTTGTTCAGTTT 58.463 39.130 0.00 0.00 41.73 2.66
3033 3107 4.976116 GCGTTCTGCTATTTGTTCAGTTTT 59.024 37.500 0.00 0.00 41.73 2.43
3034 3108 5.108254 GCGTTCTGCTATTTGTTCAGTTTTG 60.108 40.000 0.00 0.00 41.73 2.44
3035 3109 5.108254 CGTTCTGCTATTTGTTCAGTTTTGC 60.108 40.000 0.00 0.00 0.00 3.68
3036 3110 4.870363 TCTGCTATTTGTTCAGTTTTGCC 58.130 39.130 0.00 0.00 0.00 4.52
3037 3111 4.340666 TCTGCTATTTGTTCAGTTTTGCCA 59.659 37.500 0.00 0.00 0.00 4.92
3038 3112 4.619973 TGCTATTTGTTCAGTTTTGCCAG 58.380 39.130 0.00 0.00 0.00 4.85
3039 3113 3.989817 GCTATTTGTTCAGTTTTGCCAGG 59.010 43.478 0.00 0.00 0.00 4.45
3040 3114 4.501400 GCTATTTGTTCAGTTTTGCCAGGT 60.501 41.667 0.00 0.00 0.00 4.00
3041 3115 3.518634 TTTGTTCAGTTTTGCCAGGTC 57.481 42.857 0.00 0.00 0.00 3.85
3042 3116 2.136298 TGTTCAGTTTTGCCAGGTCA 57.864 45.000 0.00 0.00 0.00 4.02
3043 3117 2.023673 TGTTCAGTTTTGCCAGGTCAG 58.976 47.619 0.00 0.00 0.00 3.51
3044 3118 2.024414 GTTCAGTTTTGCCAGGTCAGT 58.976 47.619 0.00 0.00 0.00 3.41
3045 3119 3.211045 GTTCAGTTTTGCCAGGTCAGTA 58.789 45.455 0.00 0.00 0.00 2.74
3046 3120 3.788227 TCAGTTTTGCCAGGTCAGTAT 57.212 42.857 0.00 0.00 0.00 2.12
3047 3121 3.411446 TCAGTTTTGCCAGGTCAGTATG 58.589 45.455 0.00 0.00 37.54 2.39
3048 3122 3.149196 CAGTTTTGCCAGGTCAGTATGT 58.851 45.455 0.00 0.00 37.40 2.29
3049 3123 4.041075 TCAGTTTTGCCAGGTCAGTATGTA 59.959 41.667 0.00 0.00 37.40 2.29
3050 3124 4.154195 CAGTTTTGCCAGGTCAGTATGTAC 59.846 45.833 0.00 0.00 37.40 2.90
3051 3125 2.665649 TTGCCAGGTCAGTATGTACG 57.334 50.000 0.00 0.00 37.40 3.67
3052 3126 1.552578 TGCCAGGTCAGTATGTACGT 58.447 50.000 0.00 0.00 37.40 3.57
3053 3127 1.203758 TGCCAGGTCAGTATGTACGTG 59.796 52.381 0.00 0.00 37.40 4.49
3054 3128 1.470979 GCCAGGTCAGTATGTACGTGG 60.471 57.143 0.00 9.27 45.81 4.94
3055 3129 1.470979 CCAGGTCAGTATGTACGTGGC 60.471 57.143 0.00 0.00 41.46 5.01
3056 3130 1.476891 CAGGTCAGTATGTACGTGGCT 59.523 52.381 0.00 0.00 37.40 4.75
3057 3131 2.094182 CAGGTCAGTATGTACGTGGCTT 60.094 50.000 0.00 0.00 37.40 4.35
3058 3132 2.094182 AGGTCAGTATGTACGTGGCTTG 60.094 50.000 0.00 0.00 37.40 4.01
3059 3133 2.353406 GGTCAGTATGTACGTGGCTTGT 60.353 50.000 0.00 0.00 37.40 3.16
3060 3134 3.119388 GGTCAGTATGTACGTGGCTTGTA 60.119 47.826 0.00 0.00 37.40 2.41
3061 3135 3.855950 GTCAGTATGTACGTGGCTTGTAC 59.144 47.826 0.00 11.33 41.97 2.90
3062 3136 3.760151 TCAGTATGTACGTGGCTTGTACT 59.240 43.478 16.75 0.00 42.09 2.73
3063 3137 4.943093 TCAGTATGTACGTGGCTTGTACTA 59.057 41.667 16.75 7.49 42.09 1.82
3064 3138 5.591472 TCAGTATGTACGTGGCTTGTACTAT 59.409 40.000 16.75 12.18 42.09 2.12
3065 3139 5.685954 CAGTATGTACGTGGCTTGTACTATG 59.314 44.000 16.75 9.09 42.09 2.23
3066 3140 4.994907 ATGTACGTGGCTTGTACTATGA 57.005 40.909 16.75 2.28 42.09 2.15
3067 3141 4.994907 TGTACGTGGCTTGTACTATGAT 57.005 40.909 16.75 0.00 42.09 2.45
3068 3142 4.928601 TGTACGTGGCTTGTACTATGATC 58.071 43.478 16.75 0.00 42.09 2.92
3069 3143 3.454371 ACGTGGCTTGTACTATGATCC 57.546 47.619 0.00 0.00 0.00 3.36
3070 3144 3.031736 ACGTGGCTTGTACTATGATCCT 58.968 45.455 0.00 0.00 0.00 3.24
3071 3145 3.451178 ACGTGGCTTGTACTATGATCCTT 59.549 43.478 0.00 0.00 0.00 3.36
3072 3146 4.647853 ACGTGGCTTGTACTATGATCCTTA 59.352 41.667 0.00 0.00 0.00 2.69
3073 3147 5.304614 ACGTGGCTTGTACTATGATCCTTAT 59.695 40.000 0.00 0.00 0.00 1.73
3074 3148 5.635280 CGTGGCTTGTACTATGATCCTTATG 59.365 44.000 0.00 0.00 0.00 1.90
3075 3149 6.525629 GTGGCTTGTACTATGATCCTTATGT 58.474 40.000 0.00 0.00 0.00 2.29
3076 3150 6.992715 GTGGCTTGTACTATGATCCTTATGTT 59.007 38.462 0.00 0.00 0.00 2.71
3077 3151 8.148351 GTGGCTTGTACTATGATCCTTATGTTA 58.852 37.037 0.00 0.00 0.00 2.41
3078 3152 8.880244 TGGCTTGTACTATGATCCTTATGTTAT 58.120 33.333 0.00 0.00 0.00 1.89
3090 3164 9.476202 TGATCCTTATGTTATAAATGAGACACG 57.524 33.333 0.00 0.00 0.00 4.49
3091 3165 9.477484 GATCCTTATGTTATAAATGAGACACGT 57.523 33.333 0.00 0.00 0.00 4.49
3101 3175 5.734855 AAATGAGACACGTATTACCATGC 57.265 39.130 0.00 0.00 0.00 4.06
3102 3176 3.878160 TGAGACACGTATTACCATGCA 57.122 42.857 0.00 0.00 0.00 3.96
3103 3177 4.195225 TGAGACACGTATTACCATGCAA 57.805 40.909 0.00 0.00 0.00 4.08
3104 3178 4.570930 TGAGACACGTATTACCATGCAAA 58.429 39.130 0.00 0.00 0.00 3.68
3105 3179 4.998033 TGAGACACGTATTACCATGCAAAA 59.002 37.500 0.00 0.00 0.00 2.44
3106 3180 5.470437 TGAGACACGTATTACCATGCAAAAA 59.530 36.000 0.00 0.00 0.00 1.94
3159 3233 6.215121 CAATTTTGAGTTGTTGGCACAGATA 58.785 36.000 0.00 0.00 42.39 1.98
3160 3234 5.843673 TTTTGAGTTGTTGGCACAGATAA 57.156 34.783 0.00 0.00 42.39 1.75
3464 3538 2.957402 TTCAGGCTTCACTGGTCATT 57.043 45.000 0.00 0.00 38.98 2.57
3666 3741 9.478768 TCTGTCGTGTGTCTTTACATAATTTTA 57.521 29.630 0.00 0.00 38.08 1.52
3756 3831 1.331756 GCTCATGTACGCAATCCTTGG 59.668 52.381 0.00 0.00 0.00 3.61
3851 3926 1.068895 CAGGCAATTGTGGAAAGTGCA 59.931 47.619 11.90 0.00 36.93 4.57
4018 4094 2.295909 TGCCCAAGTATGTTTTGAGTGC 59.704 45.455 0.00 0.00 0.00 4.40
4402 4482 5.665916 ATGGCAATACTTTTCAGAAAGGG 57.334 39.130 9.65 3.73 45.24 3.95
4529 4609 4.221262 TCCTTTGAGAATGCAAATTGAGGG 59.779 41.667 0.00 0.00 37.16 4.30
4590 4670 5.354767 GGCGGCAGTAGTTACTTTATTACT 58.645 41.667 3.07 0.00 33.46 2.24
4591 4671 5.461407 GGCGGCAGTAGTTACTTTATTACTC 59.539 44.000 3.07 0.00 33.46 2.59
4592 4672 5.461407 GCGGCAGTAGTTACTTTATTACTCC 59.539 44.000 0.00 0.00 33.46 3.85
4593 4673 5.981915 CGGCAGTAGTTACTTTATTACTCCC 59.018 44.000 0.00 0.00 33.46 4.30
4594 4674 6.183360 CGGCAGTAGTTACTTTATTACTCCCT 60.183 42.308 0.00 0.00 33.46 4.20
4595 4675 7.208777 GGCAGTAGTTACTTTATTACTCCCTC 58.791 42.308 0.00 0.00 33.46 4.30
4596 4676 7.208777 GCAGTAGTTACTTTATTACTCCCTCC 58.791 42.308 0.00 0.00 33.46 4.30
4597 4677 7.424001 CAGTAGTTACTTTATTACTCCCTCCG 58.576 42.308 0.00 0.00 33.46 4.63
4598 4678 7.067981 CAGTAGTTACTTTATTACTCCCTCCGT 59.932 40.741 0.00 0.00 33.46 4.69
4599 4679 8.275040 AGTAGTTACTTTATTACTCCCTCCGTA 58.725 37.037 0.00 0.00 31.13 4.02
4600 4680 7.340122 AGTTACTTTATTACTCCCTCCGTAC 57.660 40.000 0.00 0.00 0.00 3.67
4601 4681 6.322456 AGTTACTTTATTACTCCCTCCGTACC 59.678 42.308 0.00 0.00 0.00 3.34
4602 4682 4.613437 ACTTTATTACTCCCTCCGTACCA 58.387 43.478 0.00 0.00 0.00 3.25
4603 4683 5.025453 ACTTTATTACTCCCTCCGTACCAA 58.975 41.667 0.00 0.00 0.00 3.67
4604 4684 5.484998 ACTTTATTACTCCCTCCGTACCAAA 59.515 40.000 0.00 0.00 0.00 3.28
4605 4685 6.013466 ACTTTATTACTCCCTCCGTACCAAAA 60.013 38.462 0.00 0.00 0.00 2.44
4606 4686 6.564557 TTATTACTCCCTCCGTACCAAAAT 57.435 37.500 0.00 0.00 0.00 1.82
4607 4687 7.673641 TTATTACTCCCTCCGTACCAAAATA 57.326 36.000 0.00 0.00 0.00 1.40
4608 4688 6.564557 ATTACTCCCTCCGTACCAAAATAA 57.435 37.500 0.00 0.00 0.00 1.40
4609 4689 4.482952 ACTCCCTCCGTACCAAAATAAG 57.517 45.455 0.00 0.00 0.00 1.73
4610 4690 3.842436 ACTCCCTCCGTACCAAAATAAGT 59.158 43.478 0.00 0.00 0.00 2.24
4611 4691 4.189231 CTCCCTCCGTACCAAAATAAGTG 58.811 47.826 0.00 0.00 0.00 3.16
4612 4692 3.583966 TCCCTCCGTACCAAAATAAGTGT 59.416 43.478 0.00 0.00 0.00 3.55
4613 4693 3.937079 CCCTCCGTACCAAAATAAGTGTC 59.063 47.826 0.00 0.00 0.00 3.67
4614 4694 4.323257 CCCTCCGTACCAAAATAAGTGTCT 60.323 45.833 0.00 0.00 0.00 3.41
4615 4695 4.868734 CCTCCGTACCAAAATAAGTGTCTC 59.131 45.833 0.00 0.00 0.00 3.36
4616 4696 5.471556 TCCGTACCAAAATAAGTGTCTCA 57.528 39.130 0.00 0.00 0.00 3.27
4617 4697 5.856156 TCCGTACCAAAATAAGTGTCTCAA 58.144 37.500 0.00 0.00 0.00 3.02
4618 4698 5.697633 TCCGTACCAAAATAAGTGTCTCAAC 59.302 40.000 0.00 0.00 0.00 3.18
4619 4699 5.699458 CCGTACCAAAATAAGTGTCTCAACT 59.301 40.000 0.00 0.00 0.00 3.16
4620 4700 6.204108 CCGTACCAAAATAAGTGTCTCAACTT 59.796 38.462 0.00 0.00 42.89 2.66
4621 4701 7.255001 CCGTACCAAAATAAGTGTCTCAACTTT 60.255 37.037 0.00 0.00 40.77 2.66
4622 4702 7.797123 CGTACCAAAATAAGTGTCTCAACTTTC 59.203 37.037 0.00 0.00 40.77 2.62
4623 4703 7.881775 ACCAAAATAAGTGTCTCAACTTTCT 57.118 32.000 0.00 0.00 40.77 2.52
4624 4704 8.974060 ACCAAAATAAGTGTCTCAACTTTCTA 57.026 30.769 0.00 0.00 40.77 2.10
4625 4705 8.837389 ACCAAAATAAGTGTCTCAACTTTCTAC 58.163 33.333 0.00 0.00 40.77 2.59
4626 4706 9.057089 CCAAAATAAGTGTCTCAACTTTCTACT 57.943 33.333 0.00 0.00 40.77 2.57
4669 4749 3.428589 GCTGAAATGTTCTGGAAGGATGC 60.429 47.826 0.00 0.00 0.00 3.91
4689 4769 2.418628 GCAAGCGCAACCATTCTACTAA 59.581 45.455 11.47 0.00 38.36 2.24
4694 4774 5.050490 AGCGCAACCATTCTACTAATAGTG 58.950 41.667 11.47 0.00 0.00 2.74
4814 4894 0.598419 GCCAAGTGTTTTCAGCAGCC 60.598 55.000 0.00 0.00 0.00 4.85
4903 4983 7.962964 ATGTTGAATTCTGAAGAAACGTAGA 57.037 32.000 7.05 0.00 37.61 2.59
4904 4984 7.408132 TGTTGAATTCTGAAGAAACGTAGAG 57.592 36.000 7.05 0.00 37.61 2.43
4905 4985 6.073765 TGTTGAATTCTGAAGAAACGTAGAGC 60.074 38.462 7.05 0.00 37.61 4.09
4913 5008 3.238108 AGAAACGTAGAGCAGGACATG 57.762 47.619 0.00 0.00 0.00 3.21
4964 5080 3.120199 GCATCGATCGTTTGATAATGGGG 60.120 47.826 15.94 0.00 34.09 4.96
4967 5083 5.477607 TCGATCGTTTGATAATGGGGTAT 57.522 39.130 15.94 0.00 34.09 2.73
5034 5150 6.367983 ACAAAATGCACATCTAGGGTGATAT 58.632 36.000 16.51 8.77 38.54 1.63
5108 5224 2.213499 GAGATAGGCACGGTGAATTGG 58.787 52.381 13.29 0.00 0.00 3.16
5167 5283 1.165270 GTGCGCTCCCAACATTTACT 58.835 50.000 9.73 0.00 0.00 2.24
5195 5311 4.410400 CCCCAAGCGGTGACCTCC 62.410 72.222 0.00 0.00 0.00 4.30
5196 5312 3.636231 CCCAAGCGGTGACCTCCA 61.636 66.667 0.00 0.00 0.00 3.86
5197 5313 2.046892 CCAAGCGGTGACCTCCAG 60.047 66.667 0.00 0.00 0.00 3.86
5272 5388 5.601662 TGAACCACCTATGAATCGAATCTC 58.398 41.667 1.55 0.00 0.00 2.75
5293 5409 5.417580 TCTCCAATTTAATTCCGGTTCCTTG 59.582 40.000 0.00 0.00 0.00 3.61
5315 5431 2.738314 CTCGAATGACTGCACATGAACA 59.262 45.455 0.00 0.00 0.00 3.18
5332 5448 4.015764 TGAACATTAAGCCTGCTTGCATA 58.984 39.130 14.42 0.00 37.47 3.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 5.163530 CGCAAGATCTATCTAGGAGATGCAT 60.164 44.000 0.00 0.00 35.65 3.96
2 3 4.157472 CGCAAGATCTATCTAGGAGATGCA 59.843 45.833 11.48 0.00 35.65 3.96
3 4 4.157656 ACGCAAGATCTATCTAGGAGATGC 59.842 45.833 11.48 9.81 36.70 3.91
4 5 5.414144 TCACGCAAGATCTATCTAGGAGATG 59.586 44.000 11.48 2.82 36.70 2.90
5 6 5.565509 TCACGCAAGATCTATCTAGGAGAT 58.434 41.667 0.00 7.55 38.77 2.75
6 7 4.974399 TCACGCAAGATCTATCTAGGAGA 58.026 43.478 0.00 0.00 43.62 3.71
7 8 5.447144 CGATCACGCAAGATCTATCTAGGAG 60.447 48.000 12.06 0.00 41.74 3.69
8 9 4.393371 CGATCACGCAAGATCTATCTAGGA 59.607 45.833 12.06 0.00 41.74 2.94
9 10 4.155099 ACGATCACGCAAGATCTATCTAGG 59.845 45.833 12.06 0.32 41.74 3.02
10 11 5.289917 ACGATCACGCAAGATCTATCTAG 57.710 43.478 12.06 0.00 41.74 2.43
11 12 5.351740 CCTACGATCACGCAAGATCTATCTA 59.648 44.000 12.06 0.00 41.74 1.98
12 13 4.155099 CCTACGATCACGCAAGATCTATCT 59.845 45.833 12.06 0.00 41.74 1.98
13 14 4.154375 TCCTACGATCACGCAAGATCTATC 59.846 45.833 12.06 0.00 41.74 2.08
14 15 4.072839 TCCTACGATCACGCAAGATCTAT 58.927 43.478 12.06 4.73 41.74 1.98
15 16 3.473625 TCCTACGATCACGCAAGATCTA 58.526 45.455 12.06 4.90 41.74 1.98
16 17 2.298610 TCCTACGATCACGCAAGATCT 58.701 47.619 12.06 0.00 41.74 2.75
17 18 2.776312 TCCTACGATCACGCAAGATC 57.224 50.000 5.52 5.52 43.96 2.75
18 19 3.520290 TTTCCTACGATCACGCAAGAT 57.480 42.857 0.00 0.00 43.96 2.40
19 20 3.520290 ATTTCCTACGATCACGCAAGA 57.480 42.857 0.00 0.00 43.96 3.02
20 21 4.600012 AAATTTCCTACGATCACGCAAG 57.400 40.909 0.00 0.00 43.96 4.01
21 22 5.365403 AAAAATTTCCTACGATCACGCAA 57.635 34.783 0.00 0.00 43.96 4.85
40 41 4.300189 ACGTAGCATGCAACTTCAAAAA 57.700 36.364 21.98 0.00 0.00 1.94
41 42 3.980646 ACGTAGCATGCAACTTCAAAA 57.019 38.095 21.98 0.00 0.00 2.44
42 43 3.304391 GGAACGTAGCATGCAACTTCAAA 60.304 43.478 21.98 0.00 0.00 2.69
43 44 2.225491 GGAACGTAGCATGCAACTTCAA 59.775 45.455 21.98 0.00 0.00 2.69
44 45 1.804151 GGAACGTAGCATGCAACTTCA 59.196 47.619 21.98 0.00 0.00 3.02
45 46 1.130561 GGGAACGTAGCATGCAACTTC 59.869 52.381 21.98 13.64 0.00 3.01
46 47 1.165270 GGGAACGTAGCATGCAACTT 58.835 50.000 21.98 5.01 0.00 2.66
47 48 0.676782 GGGGAACGTAGCATGCAACT 60.677 55.000 21.98 1.04 0.00 3.16
48 49 0.958382 TGGGGAACGTAGCATGCAAC 60.958 55.000 21.98 4.01 0.00 4.17
49 50 0.250945 TTGGGGAACGTAGCATGCAA 60.251 50.000 21.98 0.00 0.00 4.08
50 51 0.958382 GTTGGGGAACGTAGCATGCA 60.958 55.000 21.98 2.77 0.00 3.96
51 52 0.958382 TGTTGGGGAACGTAGCATGC 60.958 55.000 10.51 10.51 0.00 4.06
52 53 1.199097 GTTGTTGGGGAACGTAGCATG 59.801 52.381 0.00 0.00 0.00 4.06
53 54 1.530323 GTTGTTGGGGAACGTAGCAT 58.470 50.000 0.00 0.00 0.00 3.79
54 55 0.535553 GGTTGTTGGGGAACGTAGCA 60.536 55.000 0.00 0.00 0.00 3.49
55 56 0.535553 TGGTTGTTGGGGAACGTAGC 60.536 55.000 0.00 0.00 0.00 3.58
56 57 2.194201 ATGGTTGTTGGGGAACGTAG 57.806 50.000 0.00 0.00 0.00 3.51
57 58 2.660670 AATGGTTGTTGGGGAACGTA 57.339 45.000 0.00 0.00 0.00 3.57
58 59 2.232399 GTAATGGTTGTTGGGGAACGT 58.768 47.619 0.00 0.00 0.00 3.99
59 60 1.542472 GGTAATGGTTGTTGGGGAACG 59.458 52.381 0.00 0.00 0.00 3.95
60 61 2.884320 AGGTAATGGTTGTTGGGGAAC 58.116 47.619 0.00 0.00 0.00 3.62
61 62 4.743705 TTAGGTAATGGTTGTTGGGGAA 57.256 40.909 0.00 0.00 0.00 3.97
62 63 4.743705 TTTAGGTAATGGTTGTTGGGGA 57.256 40.909 0.00 0.00 0.00 4.81
63 64 5.337975 CCATTTTAGGTAATGGTTGTTGGGG 60.338 44.000 7.12 0.00 46.19 4.96
64 65 5.729510 CCATTTTAGGTAATGGTTGTTGGG 58.270 41.667 7.12 0.00 46.19 4.12
73 74 8.830580 CAGATAGTGTGTCCATTTTAGGTAATG 58.169 37.037 0.00 0.00 35.70 1.90
74 75 7.499232 GCAGATAGTGTGTCCATTTTAGGTAAT 59.501 37.037 0.00 0.00 0.00 1.89
75 76 6.821665 GCAGATAGTGTGTCCATTTTAGGTAA 59.178 38.462 0.00 0.00 0.00 2.85
76 77 6.346096 GCAGATAGTGTGTCCATTTTAGGTA 58.654 40.000 0.00 0.00 0.00 3.08
77 78 5.186198 GCAGATAGTGTGTCCATTTTAGGT 58.814 41.667 0.00 0.00 0.00 3.08
78 79 4.576463 GGCAGATAGTGTGTCCATTTTAGG 59.424 45.833 0.00 0.00 0.00 2.69
79 80 4.576463 GGGCAGATAGTGTGTCCATTTTAG 59.424 45.833 0.00 0.00 39.68 1.85
80 81 4.523083 GGGCAGATAGTGTGTCCATTTTA 58.477 43.478 0.00 0.00 39.68 1.52
81 82 3.356290 GGGCAGATAGTGTGTCCATTTT 58.644 45.455 0.00 0.00 39.68 1.82
82 83 2.680805 CGGGCAGATAGTGTGTCCATTT 60.681 50.000 0.00 0.00 39.92 2.32
83 84 1.134401 CGGGCAGATAGTGTGTCCATT 60.134 52.381 0.00 0.00 39.92 3.16
84 85 0.465705 CGGGCAGATAGTGTGTCCAT 59.534 55.000 0.00 0.00 39.92 3.41
85 86 1.897423 CGGGCAGATAGTGTGTCCA 59.103 57.895 0.00 0.00 39.92 4.02
86 87 1.521681 GCGGGCAGATAGTGTGTCC 60.522 63.158 0.00 0.00 36.24 4.02
87 88 1.878522 CGCGGGCAGATAGTGTGTC 60.879 63.158 0.00 0.00 0.00 3.67
88 89 2.184322 CGCGGGCAGATAGTGTGT 59.816 61.111 0.00 0.00 0.00 3.72
89 90 2.586079 CCGCGGGCAGATAGTGTG 60.586 66.667 20.10 0.00 0.00 3.82
90 91 2.758327 TCCGCGGGCAGATAGTGT 60.758 61.111 27.83 0.00 0.00 3.55
91 92 2.279517 GTCCGCGGGCAGATAGTG 60.280 66.667 27.96 0.00 0.00 2.74
92 93 2.298158 CTTGTCCGCGGGCAGATAGT 62.298 60.000 33.33 0.00 0.00 2.12
93 94 1.592669 CTTGTCCGCGGGCAGATAG 60.593 63.158 33.33 23.69 0.00 2.08
94 95 2.292794 GACTTGTCCGCGGGCAGATA 62.293 60.000 33.33 18.01 0.00 1.98
95 96 3.665675 GACTTGTCCGCGGGCAGAT 62.666 63.158 33.33 24.59 0.00 2.90
96 97 4.373116 GACTTGTCCGCGGGCAGA 62.373 66.667 33.33 21.69 0.00 4.26
97 98 4.379243 AGACTTGTCCGCGGGCAG 62.379 66.667 33.33 26.84 0.00 4.85
98 99 4.680237 CAGACTTGTCCGCGGGCA 62.680 66.667 32.02 32.02 0.00 5.36
100 101 3.691342 TCCAGACTTGTCCGCGGG 61.691 66.667 27.83 11.94 0.00 6.13
101 102 2.432628 GTCCAGACTTGTCCGCGG 60.433 66.667 22.12 22.12 0.00 6.46
102 103 2.432628 GGTCCAGACTTGTCCGCG 60.433 66.667 0.00 0.00 0.00 6.46
103 104 1.374758 CTGGTCCAGACTTGTCCGC 60.375 63.158 14.26 0.00 32.44 5.54
104 105 0.038159 GACTGGTCCAGACTTGTCCG 60.038 60.000 26.18 0.00 35.18 4.79
105 106 1.001406 CAGACTGGTCCAGACTTGTCC 59.999 57.143 26.18 5.30 34.66 4.02
106 107 1.606737 GCAGACTGGTCCAGACTTGTC 60.607 57.143 26.18 12.63 34.66 3.18
107 108 0.394565 GCAGACTGGTCCAGACTTGT 59.605 55.000 26.18 2.76 34.66 3.16
108 109 0.668706 CGCAGACTGGTCCAGACTTG 60.669 60.000 26.18 18.76 34.66 3.16
109 110 1.668294 CGCAGACTGGTCCAGACTT 59.332 57.895 26.18 2.59 34.66 3.01
110 111 2.279069 CCGCAGACTGGTCCAGACT 61.279 63.158 26.18 21.31 37.00 3.24
111 112 2.262915 CCGCAGACTGGTCCAGAC 59.737 66.667 26.18 19.26 35.18 3.51
112 113 2.117423 TCCGCAGACTGGTCCAGA 59.883 61.111 26.18 0.00 35.18 3.86
113 114 2.262915 GTCCGCAGACTGGTCCAG 59.737 66.667 17.88 17.88 40.10 3.86
114 115 2.523168 TGTCCGCAGACTGGTCCA 60.523 61.111 4.26 0.00 43.91 4.02
115 116 2.048127 GTGTCCGCAGACTGGTCC 60.048 66.667 4.26 0.00 43.91 4.46
116 117 1.373497 CTGTGTCCGCAGACTGGTC 60.373 63.158 4.26 0.00 43.91 4.02
117 118 1.188219 ATCTGTGTCCGCAGACTGGT 61.188 55.000 12.39 0.00 46.72 4.00
118 119 0.738762 CATCTGTGTCCGCAGACTGG 60.739 60.000 12.39 2.84 46.72 4.00
119 120 1.357258 GCATCTGTGTCCGCAGACTG 61.357 60.000 12.39 12.23 46.72 3.51
120 121 1.079543 GCATCTGTGTCCGCAGACT 60.080 57.895 12.39 0.87 46.72 3.24
121 122 2.447887 CGCATCTGTGTCCGCAGAC 61.448 63.158 12.39 0.00 46.72 3.51
123 124 3.190849 CCGCATCTGTGTCCGCAG 61.191 66.667 1.40 1.40 37.81 5.18
124 125 4.758251 CCCGCATCTGTGTCCGCA 62.758 66.667 0.00 0.00 0.00 5.69
125 126 4.451150 TCCCGCATCTGTGTCCGC 62.451 66.667 0.00 0.00 0.00 5.54
132 133 4.899239 GGCCGACTCCCGCATCTG 62.899 72.222 0.00 0.00 36.84 2.90
148 149 3.496884 CGTTTATGGGATACGTTGGATGG 59.503 47.826 0.00 0.00 37.60 3.51
185 186 4.666928 ATGCGTTTGAAATGAAATTGGC 57.333 36.364 0.48 0.00 36.10 4.52
213 214 1.527736 GCGTGAATGTCAACGTACCAA 59.472 47.619 0.00 0.00 0.00 3.67
247 248 2.054021 TCCACAACCTCCATTGTCAGA 58.946 47.619 0.00 0.00 40.89 3.27
250 251 3.694566 GGTAATCCACAACCTCCATTGTC 59.305 47.826 0.00 0.00 40.89 3.18
253 254 2.574369 TCGGTAATCCACAACCTCCATT 59.426 45.455 0.00 0.00 33.34 3.16
282 283 1.641577 CTACTTCTACGCCACCAAGC 58.358 55.000 0.00 0.00 0.00 4.01
289 290 1.136500 CAACCTCCCTACTTCTACGCC 59.864 57.143 0.00 0.00 0.00 5.68
318 319 1.000521 CACATGCCACCCTGTCCAT 60.001 57.895 0.00 0.00 0.00 3.41
319 320 1.130678 TACACATGCCACCCTGTCCA 61.131 55.000 0.00 0.00 0.00 4.02
332 333 1.754803 ACCATCGTCGTCCATACACAT 59.245 47.619 0.00 0.00 0.00 3.21
337 338 0.379316 CGTCACCATCGTCGTCCATA 59.621 55.000 0.00 0.00 0.00 2.74
423 424 3.005540 GCAAAAGATGGGGTGGCCG 62.006 63.158 0.00 0.00 0.00 6.13
428 429 0.686789 GCAAAGGCAAAAGATGGGGT 59.313 50.000 0.00 0.00 40.72 4.95
475 476 2.184533 TCCGCCTGGAAGATTAACTCA 58.815 47.619 0.00 0.00 42.85 3.41
537 538 1.876714 CGCATGGACCCGTACGAAG 60.877 63.158 18.76 10.36 0.00 3.79
538 539 2.182284 CGCATGGACCCGTACGAA 59.818 61.111 18.76 0.00 0.00 3.85
540 541 4.137872 ACCGCATGGACCCGTACG 62.138 66.667 8.69 8.69 39.21 3.67
584 585 1.301165 CTGATCGCCGCATCATCCA 60.301 57.895 6.12 0.00 32.21 3.41
590 591 4.957684 CCGCTCTGATCGCCGCAT 62.958 66.667 0.00 0.00 0.00 4.73
600 602 2.837291 CTCCCCCTCTCCGCTCTG 60.837 72.222 0.00 0.00 0.00 3.35
601 603 4.150454 CCTCCCCCTCTCCGCTCT 62.150 72.222 0.00 0.00 0.00 4.09
607 609 1.544151 AAAACCCCCTCCCCCTCTC 60.544 63.158 0.00 0.00 0.00 3.20
621 623 2.140923 CGCAAATCGGTGCCAAAAC 58.859 52.632 1.84 0.00 41.73 2.43
642 644 2.879907 CCCGTGCATTTGGAGCAG 59.120 61.111 4.33 0.00 43.63 4.24
645 647 1.508088 GAAGCCCGTGCATTTGGAG 59.492 57.895 4.33 0.00 41.13 3.86
667 669 0.817634 CTCAGCCCACACAAAACCGA 60.818 55.000 0.00 0.00 0.00 4.69
668 670 1.654220 CTCAGCCCACACAAAACCG 59.346 57.895 0.00 0.00 0.00 4.44
688 691 0.447011 GACACGTAGGACTCCGACAG 59.553 60.000 8.84 3.36 0.00 3.51
690 693 1.423056 CGACACGTAGGACTCCGAC 59.577 63.158 0.00 0.00 0.00 4.79
708 711 2.572284 CGTGGAGTTCGGACCTCC 59.428 66.667 14.18 14.18 37.75 4.30
717 720 2.597510 GGGGCTTTGCGTGGAGTT 60.598 61.111 0.00 0.00 0.00 3.01
724 727 2.917227 AAACCAGGGGGCTTTGCG 60.917 61.111 0.00 0.00 37.90 4.85
738 741 3.145212 ACTCACAAACCGAAAGCAAAC 57.855 42.857 0.00 0.00 0.00 2.93
746 749 2.159128 TGTCCGTTTACTCACAAACCGA 60.159 45.455 0.00 0.00 35.42 4.69
754 757 0.604073 TCCGCATGTCCGTTTACTCA 59.396 50.000 0.00 0.00 0.00 3.41
793 796 0.606401 CAAGACATCCAACACGGGCT 60.606 55.000 0.00 0.00 34.36 5.19
797 800 1.333308 TGTTGCAAGACATCCAACACG 59.667 47.619 0.00 0.00 42.56 4.49
808 811 2.548057 GACTTGTTCGGATGTTGCAAGA 59.452 45.455 0.00 0.00 38.90 3.02
821 824 0.857287 GTGTCCGAACCGACTTGTTC 59.143 55.000 0.00 0.00 40.96 3.18
826 829 2.333938 CACGTGTCCGAACCGACT 59.666 61.111 7.58 0.00 37.88 4.18
831 834 3.400590 GTCCGCACGTGTCCGAAC 61.401 66.667 18.38 3.01 37.88 3.95
832 835 2.702751 AATGTCCGCACGTGTCCGAA 62.703 55.000 18.38 0.95 37.88 4.30
835 838 0.385473 CAAAATGTCCGCACGTGTCC 60.385 55.000 18.38 0.00 0.00 4.02
839 842 1.852067 GCCTCAAAATGTCCGCACGT 61.852 55.000 0.00 0.00 0.00 4.49
840 843 1.154225 GCCTCAAAATGTCCGCACG 60.154 57.895 0.00 0.00 0.00 5.34
863 866 2.672961 TGCTAAGGTCATCTCCAACG 57.327 50.000 0.00 0.00 0.00 4.10
864 867 5.183904 ACATTTTGCTAAGGTCATCTCCAAC 59.816 40.000 0.00 0.00 0.00 3.77
886 889 3.689347 AGCAAGACAATATGGCTCAACA 58.311 40.909 0.00 0.00 31.94 3.33
916 919 8.934023 ACATAAGAATGACCCTAGAAAAACAA 57.066 30.769 0.00 0.00 36.54 2.83
935 938 8.723942 AGAGTAACTGAAGCCAATAACATAAG 57.276 34.615 0.00 0.00 0.00 1.73
982 985 5.389520 TCAGAGGAGAGAACATCGGAATAT 58.610 41.667 0.00 0.00 0.00 1.28
983 986 4.793201 TCAGAGGAGAGAACATCGGAATA 58.207 43.478 0.00 0.00 0.00 1.75
984 987 3.636679 TCAGAGGAGAGAACATCGGAAT 58.363 45.455 0.00 0.00 0.00 3.01
985 988 3.087370 TCAGAGGAGAGAACATCGGAA 57.913 47.619 0.00 0.00 0.00 4.30
986 989 2.808906 TCAGAGGAGAGAACATCGGA 57.191 50.000 0.00 0.00 0.00 4.55
987 990 6.624861 GCTTATATCAGAGGAGAGAACATCGG 60.625 46.154 0.00 0.00 0.00 4.18
988 991 6.072230 TGCTTATATCAGAGGAGAGAACATCG 60.072 42.308 0.00 0.00 0.00 3.84
989 992 7.225784 TGCTTATATCAGAGGAGAGAACATC 57.774 40.000 0.00 0.00 0.00 3.06
1088 1107 1.374505 GCGCCGGTGGTTTACTGTA 60.375 57.895 18.41 0.00 33.60 2.74
1089 1108 2.667199 GCGCCGGTGGTTTACTGT 60.667 61.111 18.41 0.00 33.60 3.55
1145 1164 2.677875 GCTTTGGGGGAGGCACAG 60.678 66.667 0.00 0.00 0.00 3.66
1146 1165 4.299796 GGCTTTGGGGGAGGCACA 62.300 66.667 0.00 0.00 39.31 4.57
1168 1187 2.203788 AAGCCGTGGAGGACTGGA 60.204 61.111 0.00 0.00 45.00 3.86
1170 1189 1.374758 GTGAAGCCGTGGAGGACTG 60.375 63.158 0.00 0.00 45.00 3.51
1171 1190 2.584391 GGTGAAGCCGTGGAGGACT 61.584 63.158 0.00 0.00 45.00 3.85
1614 1649 2.631160 ACCCAAATCACAACTCGACA 57.369 45.000 0.00 0.00 0.00 4.35
1868 1939 8.303156 CAGAAAGTGTCCTATATCATCTACCAG 58.697 40.741 0.00 0.00 0.00 4.00
1872 1943 9.647918 AAGTCAGAAAGTGTCCTATATCATCTA 57.352 33.333 0.00 0.00 0.00 1.98
1878 1949 6.777213 ACGAAGTCAGAAAGTGTCCTATAT 57.223 37.500 0.00 0.00 29.74 0.86
1920 1991 3.030291 ACTCACTGATCATGACCTCCTC 58.970 50.000 0.00 0.00 0.00 3.71
1944 2015 5.089970 TCCAGTTACATCCTCATGTTCAG 57.910 43.478 0.00 0.00 40.66 3.02
2103 2175 1.329906 GCATGCTGTCGGATCAAGAAG 59.670 52.381 11.37 0.00 0.00 2.85
2552 2625 6.966095 GCTCCAAGCTGATTAGGCTAACTAAT 60.966 42.308 9.55 0.00 44.90 1.73
2628 2701 9.139174 CCCACAGAATTGTTCAAAACATAATAC 57.861 33.333 0.00 0.00 41.79 1.89
2687 2760 9.866655 ACATAATACTACCATCATGTTCCAAAT 57.133 29.630 0.00 0.00 0.00 2.32
2760 2833 6.045955 GGCAAGAACTAACAATTCCACAAAA 58.954 36.000 0.00 0.00 0.00 2.44
2942 3016 1.273886 AGACCGAAGAAACCTCTGAGC 59.726 52.381 0.00 0.00 30.03 4.26
2943 3017 3.243907 ACAAGACCGAAGAAACCTCTGAG 60.244 47.826 0.00 0.00 30.03 3.35
2944 3018 2.698797 ACAAGACCGAAGAAACCTCTGA 59.301 45.455 0.00 0.00 30.03 3.27
2945 3019 3.113260 ACAAGACCGAAGAAACCTCTG 57.887 47.619 0.00 0.00 30.03 3.35
2946 3020 3.840124 AACAAGACCGAAGAAACCTCT 57.160 42.857 0.00 0.00 0.00 3.69
2947 3021 3.626217 ACAAACAAGACCGAAGAAACCTC 59.374 43.478 0.00 0.00 0.00 3.85
2948 3022 3.617284 ACAAACAAGACCGAAGAAACCT 58.383 40.909 0.00 0.00 0.00 3.50
2949 3023 5.488645 TTACAAACAAGACCGAAGAAACC 57.511 39.130 0.00 0.00 0.00 3.27
2950 3024 7.980742 AAATTACAAACAAGACCGAAGAAAC 57.019 32.000 0.00 0.00 0.00 2.78
2951 3025 9.505995 GTAAAATTACAAACAAGACCGAAGAAA 57.494 29.630 0.00 0.00 33.88 2.52
2952 3026 8.895737 AGTAAAATTACAAACAAGACCGAAGAA 58.104 29.630 6.13 0.00 36.12 2.52
2953 3027 8.441312 AGTAAAATTACAAACAAGACCGAAGA 57.559 30.769 6.13 0.00 36.12 2.87
2954 3028 9.166126 GAAGTAAAATTACAAACAAGACCGAAG 57.834 33.333 6.13 0.00 36.12 3.79
2955 3029 8.895737 AGAAGTAAAATTACAAACAAGACCGAA 58.104 29.630 6.13 0.00 36.12 4.30
2956 3030 8.441312 AGAAGTAAAATTACAAACAAGACCGA 57.559 30.769 6.13 0.00 36.12 4.69
2957 3031 8.953990 CAAGAAGTAAAATTACAAACAAGACCG 58.046 33.333 6.13 0.00 36.12 4.79
2958 3032 9.244799 CCAAGAAGTAAAATTACAAACAAGACC 57.755 33.333 6.13 0.00 36.12 3.85
2959 3033 8.752254 GCCAAGAAGTAAAATTACAAACAAGAC 58.248 33.333 6.13 0.00 36.12 3.01
2960 3034 8.691797 AGCCAAGAAGTAAAATTACAAACAAGA 58.308 29.630 6.13 0.00 36.12 3.02
2961 3035 8.755018 CAGCCAAGAAGTAAAATTACAAACAAG 58.245 33.333 6.13 0.00 36.12 3.16
2962 3036 8.254508 ACAGCCAAGAAGTAAAATTACAAACAA 58.745 29.630 6.13 0.00 36.12 2.83
2963 3037 7.777095 ACAGCCAAGAAGTAAAATTACAAACA 58.223 30.769 6.13 0.00 36.12 2.83
2964 3038 8.539674 CAACAGCCAAGAAGTAAAATTACAAAC 58.460 33.333 6.13 0.00 36.12 2.93
2965 3039 8.254508 ACAACAGCCAAGAAGTAAAATTACAAA 58.745 29.630 6.13 0.00 36.12 2.83
2966 3040 7.777095 ACAACAGCCAAGAAGTAAAATTACAA 58.223 30.769 6.13 0.00 36.12 2.41
2967 3041 7.341445 ACAACAGCCAAGAAGTAAAATTACA 57.659 32.000 6.13 0.00 36.12 2.41
2968 3042 7.381408 GGAACAACAGCCAAGAAGTAAAATTAC 59.619 37.037 0.00 0.00 0.00 1.89
2969 3043 7.286775 AGGAACAACAGCCAAGAAGTAAAATTA 59.713 33.333 0.00 0.00 0.00 1.40
2970 3044 6.098266 AGGAACAACAGCCAAGAAGTAAAATT 59.902 34.615 0.00 0.00 0.00 1.82
2971 3045 5.598417 AGGAACAACAGCCAAGAAGTAAAAT 59.402 36.000 0.00 0.00 0.00 1.82
2972 3046 4.953579 AGGAACAACAGCCAAGAAGTAAAA 59.046 37.500 0.00 0.00 0.00 1.52
2973 3047 4.532834 AGGAACAACAGCCAAGAAGTAAA 58.467 39.130 0.00 0.00 0.00 2.01
2974 3048 4.164843 AGGAACAACAGCCAAGAAGTAA 57.835 40.909 0.00 0.00 0.00 2.24
2975 3049 3.857157 AGGAACAACAGCCAAGAAGTA 57.143 42.857 0.00 0.00 0.00 2.24
2976 3050 2.736670 AGGAACAACAGCCAAGAAGT 57.263 45.000 0.00 0.00 0.00 3.01
2977 3051 3.131046 ACAAAGGAACAACAGCCAAGAAG 59.869 43.478 0.00 0.00 0.00 2.85
2978 3052 3.096092 ACAAAGGAACAACAGCCAAGAA 58.904 40.909 0.00 0.00 0.00 2.52
2979 3053 2.426738 CACAAAGGAACAACAGCCAAGA 59.573 45.455 0.00 0.00 0.00 3.02
2980 3054 2.813061 CACAAAGGAACAACAGCCAAG 58.187 47.619 0.00 0.00 0.00 3.61
2981 3055 1.134848 GCACAAAGGAACAACAGCCAA 60.135 47.619 0.00 0.00 0.00 4.52
2982 3056 0.459489 GCACAAAGGAACAACAGCCA 59.541 50.000 0.00 0.00 0.00 4.75
2983 3057 0.459489 TGCACAAAGGAACAACAGCC 59.541 50.000 0.00 0.00 0.00 4.85
2984 3058 2.292103 TTGCACAAAGGAACAACAGC 57.708 45.000 0.00 0.00 0.00 4.40
2994 3068 0.593128 ACGCTAGCCTTTGCACAAAG 59.407 50.000 14.79 14.79 45.47 2.77
2995 3069 1.001815 GAACGCTAGCCTTTGCACAAA 60.002 47.619 9.66 0.00 41.13 2.83
2996 3070 0.591170 GAACGCTAGCCTTTGCACAA 59.409 50.000 9.66 0.00 41.13 3.33
2997 3071 0.250295 AGAACGCTAGCCTTTGCACA 60.250 50.000 9.66 0.00 41.13 4.57
2998 3072 0.166814 CAGAACGCTAGCCTTTGCAC 59.833 55.000 9.66 0.00 41.13 4.57
2999 3073 1.577328 GCAGAACGCTAGCCTTTGCA 61.577 55.000 17.39 0.00 37.58 4.08
3000 3074 1.135523 GCAGAACGCTAGCCTTTGC 59.864 57.895 9.66 9.97 37.77 3.68
3010 3084 3.813529 ACTGAACAAATAGCAGAACGC 57.186 42.857 0.00 0.00 42.91 4.84
3011 3085 5.108254 GCAAAACTGAACAAATAGCAGAACG 60.108 40.000 0.00 0.00 33.94 3.95
3012 3086 5.175673 GGCAAAACTGAACAAATAGCAGAAC 59.824 40.000 0.00 0.00 33.94 3.01
3013 3087 5.163468 TGGCAAAACTGAACAAATAGCAGAA 60.163 36.000 0.00 0.00 33.94 3.02
3014 3088 4.340666 TGGCAAAACTGAACAAATAGCAGA 59.659 37.500 0.00 0.00 33.94 4.26
3015 3089 4.619973 TGGCAAAACTGAACAAATAGCAG 58.380 39.130 0.00 0.00 35.81 4.24
3016 3090 4.501229 CCTGGCAAAACTGAACAAATAGCA 60.501 41.667 0.00 0.00 0.00 3.49
3017 3091 3.989817 CCTGGCAAAACTGAACAAATAGC 59.010 43.478 0.00 0.00 0.00 2.97
3018 3092 5.200368 ACCTGGCAAAACTGAACAAATAG 57.800 39.130 0.00 0.00 0.00 1.73
3019 3093 4.646945 TGACCTGGCAAAACTGAACAAATA 59.353 37.500 0.00 0.00 0.00 1.40
3020 3094 3.450457 TGACCTGGCAAAACTGAACAAAT 59.550 39.130 0.00 0.00 0.00 2.32
3021 3095 2.828520 TGACCTGGCAAAACTGAACAAA 59.171 40.909 0.00 0.00 0.00 2.83
3022 3096 2.426738 CTGACCTGGCAAAACTGAACAA 59.573 45.455 0.00 0.00 0.00 2.83
3023 3097 2.023673 CTGACCTGGCAAAACTGAACA 58.976 47.619 0.00 0.00 0.00 3.18
3024 3098 2.024414 ACTGACCTGGCAAAACTGAAC 58.976 47.619 0.00 0.00 0.00 3.18
3025 3099 2.435372 ACTGACCTGGCAAAACTGAA 57.565 45.000 0.00 0.00 0.00 3.02
3026 3100 3.181445 ACATACTGACCTGGCAAAACTGA 60.181 43.478 0.00 0.00 0.00 3.41
3027 3101 3.149196 ACATACTGACCTGGCAAAACTG 58.851 45.455 0.00 0.00 0.00 3.16
3028 3102 3.508845 ACATACTGACCTGGCAAAACT 57.491 42.857 0.00 0.00 0.00 2.66
3029 3103 3.124636 CGTACATACTGACCTGGCAAAAC 59.875 47.826 0.00 0.00 0.00 2.43
3030 3104 3.244284 ACGTACATACTGACCTGGCAAAA 60.244 43.478 0.00 0.00 0.00 2.44
3031 3105 2.300723 ACGTACATACTGACCTGGCAAA 59.699 45.455 0.00 0.00 0.00 3.68
3032 3106 1.897133 ACGTACATACTGACCTGGCAA 59.103 47.619 0.00 0.00 0.00 4.52
3033 3107 1.203758 CACGTACATACTGACCTGGCA 59.796 52.381 0.00 0.00 0.00 4.92
3034 3108 1.470979 CCACGTACATACTGACCTGGC 60.471 57.143 0.00 0.00 0.00 4.85
3035 3109 1.470979 GCCACGTACATACTGACCTGG 60.471 57.143 0.00 0.00 0.00 4.45
3036 3110 1.476891 AGCCACGTACATACTGACCTG 59.523 52.381 0.00 0.00 0.00 4.00
3037 3111 1.848652 AGCCACGTACATACTGACCT 58.151 50.000 0.00 0.00 0.00 3.85
3038 3112 2.268298 CAAGCCACGTACATACTGACC 58.732 52.381 0.00 0.00 0.00 4.02
3039 3113 2.955614 ACAAGCCACGTACATACTGAC 58.044 47.619 0.00 0.00 0.00 3.51
3040 3114 3.760151 AGTACAAGCCACGTACATACTGA 59.240 43.478 9.73 0.00 41.40 3.41
3041 3115 4.106029 AGTACAAGCCACGTACATACTG 57.894 45.455 9.73 0.00 41.40 2.74
3042 3116 5.591472 TCATAGTACAAGCCACGTACATACT 59.409 40.000 9.73 0.00 41.40 2.12
3043 3117 5.824429 TCATAGTACAAGCCACGTACATAC 58.176 41.667 9.73 0.00 41.40 2.39
3044 3118 6.294342 GGATCATAGTACAAGCCACGTACATA 60.294 42.308 9.73 2.10 41.40 2.29
3045 3119 4.994907 TCATAGTACAAGCCACGTACAT 57.005 40.909 9.73 1.12 41.40 2.29
3046 3120 4.202080 GGATCATAGTACAAGCCACGTACA 60.202 45.833 9.73 0.00 41.40 2.90
3047 3121 4.037684 AGGATCATAGTACAAGCCACGTAC 59.962 45.833 0.00 0.00 39.64 3.67
3048 3122 4.212716 AGGATCATAGTACAAGCCACGTA 58.787 43.478 0.00 0.00 0.00 3.57
3049 3123 3.031736 AGGATCATAGTACAAGCCACGT 58.968 45.455 0.00 0.00 0.00 4.49
3050 3124 3.735237 AGGATCATAGTACAAGCCACG 57.265 47.619 0.00 0.00 0.00 4.94
3051 3125 6.525629 ACATAAGGATCATAGTACAAGCCAC 58.474 40.000 0.00 0.00 0.00 5.01
3052 3126 6.747414 ACATAAGGATCATAGTACAAGCCA 57.253 37.500 0.00 0.00 0.00 4.75
3064 3138 9.476202 CGTGTCTCATTTATAACATAAGGATCA 57.524 33.333 0.00 0.00 0.00 2.92
3065 3139 9.477484 ACGTGTCTCATTTATAACATAAGGATC 57.523 33.333 0.00 0.00 0.00 3.36
3075 3149 8.984764 GCATGGTAATACGTGTCTCATTTATAA 58.015 33.333 0.00 0.00 0.00 0.98
3076 3150 8.145122 TGCATGGTAATACGTGTCTCATTTATA 58.855 33.333 0.00 0.00 0.00 0.98
3077 3151 6.989759 TGCATGGTAATACGTGTCTCATTTAT 59.010 34.615 0.00 0.00 0.00 1.40
3078 3152 6.342111 TGCATGGTAATACGTGTCTCATTTA 58.658 36.000 0.00 0.00 0.00 1.40
3079 3153 5.182487 TGCATGGTAATACGTGTCTCATTT 58.818 37.500 0.00 0.00 0.00 2.32
3080 3154 4.765273 TGCATGGTAATACGTGTCTCATT 58.235 39.130 0.00 0.00 0.00 2.57
3081 3155 4.400529 TGCATGGTAATACGTGTCTCAT 57.599 40.909 0.00 0.00 0.00 2.90
3082 3156 3.878160 TGCATGGTAATACGTGTCTCA 57.122 42.857 0.00 0.00 0.00 3.27
3083 3157 5.539582 TTTTGCATGGTAATACGTGTCTC 57.460 39.130 0.00 0.00 0.00 3.36
3084 3158 5.950758 TTTTTGCATGGTAATACGTGTCT 57.049 34.783 0.00 0.00 0.00 3.41
3140 3214 5.843673 TTTTATCTGTGCCAACAACTCAA 57.156 34.783 0.00 0.00 35.37 3.02
3160 3234 9.710900 GGGACTGAAGAACATAAATGAAAATTT 57.289 29.630 0.00 0.00 0.00 1.82
3177 3251 8.936864 CAACAAACTAACTTATAGGGACTGAAG 58.063 37.037 0.00 0.00 41.52 3.02
3180 3254 7.119262 CACCAACAAACTAACTTATAGGGACTG 59.881 40.741 0.00 0.00 41.52 3.51
3486 3560 6.985188 TCTTCGTAGCTTCTGCATAAATTT 57.015 33.333 0.00 0.00 42.74 1.82
3487 3561 6.985188 TTCTTCGTAGCTTCTGCATAAATT 57.015 33.333 0.00 0.00 42.74 1.82
3756 3831 7.328737 TCTGTAGAAGGCTTAAATGGTTAGTC 58.671 38.462 0.00 0.00 0.00 2.59
3851 3926 4.022416 TCAGCATTTGAAACAATTACGCCT 60.022 37.500 0.00 0.00 31.34 5.52
4037 4113 1.073897 AGCTGCCCTTCAACTGTCC 59.926 57.895 0.00 0.00 0.00 4.02
4390 4470 8.078060 ACATTCTCTTTTTCCCTTTCTGAAAA 57.922 30.769 4.18 0.00 39.30 2.29
4529 4609 9.662947 TGATCATGATTTCCTACATATCACATC 57.337 33.333 10.14 0.00 31.66 3.06
4590 4670 3.583966 ACACTTATTTTGGTACGGAGGGA 59.416 43.478 0.00 0.00 0.00 4.20
4591 4671 3.937079 GACACTTATTTTGGTACGGAGGG 59.063 47.826 0.00 0.00 0.00 4.30
4592 4672 4.828829 AGACACTTATTTTGGTACGGAGG 58.171 43.478 0.00 0.00 0.00 4.30
4593 4673 5.475719 TGAGACACTTATTTTGGTACGGAG 58.524 41.667 0.00 0.00 0.00 4.63
4594 4674 5.471556 TGAGACACTTATTTTGGTACGGA 57.528 39.130 0.00 0.00 0.00 4.69
4595 4675 5.699458 AGTTGAGACACTTATTTTGGTACGG 59.301 40.000 0.00 0.00 0.00 4.02
4596 4676 6.780706 AGTTGAGACACTTATTTTGGTACG 57.219 37.500 0.00 0.00 0.00 3.67
4597 4677 8.837389 AGAAAGTTGAGACACTTATTTTGGTAC 58.163 33.333 0.00 0.00 35.87 3.34
4598 4678 8.974060 AGAAAGTTGAGACACTTATTTTGGTA 57.026 30.769 0.00 0.00 35.87 3.25
4599 4679 7.881775 AGAAAGTTGAGACACTTATTTTGGT 57.118 32.000 0.00 0.00 35.87 3.67
4600 4680 9.057089 AGTAGAAAGTTGAGACACTTATTTTGG 57.943 33.333 0.00 0.00 35.87 3.28
4606 4686 9.565090 TGTACTAGTAGAAAGTTGAGACACTTA 57.435 33.333 1.87 0.00 35.87 2.24
4607 4687 8.461249 TGTACTAGTAGAAAGTTGAGACACTT 57.539 34.615 1.87 0.00 38.74 3.16
4608 4688 8.461249 TTGTACTAGTAGAAAGTTGAGACACT 57.539 34.615 9.89 0.00 0.00 3.55
4609 4689 8.566260 TCTTGTACTAGTAGAAAGTTGAGACAC 58.434 37.037 13.00 0.00 0.00 3.67
4610 4690 8.687292 TCTTGTACTAGTAGAAAGTTGAGACA 57.313 34.615 13.00 0.00 0.00 3.41
4617 4697 9.835389 ACGAGATATCTTGTACTAGTAGAAAGT 57.165 33.333 21.99 7.60 38.76 2.66
4619 4699 9.828039 TCACGAGATATCTTGTACTAGTAGAAA 57.172 33.333 22.68 5.98 38.50 2.52
4620 4700 9.999660 ATCACGAGATATCTTGTACTAGTAGAA 57.000 33.333 22.68 11.62 38.50 2.10
4621 4701 9.425577 CATCACGAGATATCTTGTACTAGTAGA 57.574 37.037 22.68 14.97 38.50 2.59
4622 4702 8.172484 GCATCACGAGATATCTTGTACTAGTAG 58.828 40.741 22.68 10.69 38.50 2.57
4623 4703 7.878644 AGCATCACGAGATATCTTGTACTAGTA 59.121 37.037 22.68 0.00 38.50 1.82
4624 4704 6.712998 AGCATCACGAGATATCTTGTACTAGT 59.287 38.462 22.68 0.00 38.50 2.57
4625 4705 7.020602 CAGCATCACGAGATATCTTGTACTAG 58.979 42.308 22.68 12.26 38.50 2.57
4626 4706 6.710744 TCAGCATCACGAGATATCTTGTACTA 59.289 38.462 22.68 13.05 38.50 1.82
4627 4707 5.532779 TCAGCATCACGAGATATCTTGTACT 59.467 40.000 22.68 15.24 38.50 2.73
4641 4721 2.743664 TCCAGAACATTTCAGCATCACG 59.256 45.455 0.00 0.00 0.00 4.35
4669 4749 4.882671 ATTAGTAGAATGGTTGCGCTTG 57.117 40.909 9.73 0.00 0.00 4.01
4682 4762 5.360144 GGAACACTCCAGCACTATTAGTAGA 59.640 44.000 0.00 0.00 41.96 2.59
4689 4769 0.912486 GGGGAACACTCCAGCACTAT 59.088 55.000 0.00 0.00 44.51 2.12
4814 4894 2.810274 CCACTCATCGCCAATAATCAGG 59.190 50.000 0.00 0.00 0.00 3.86
4839 4919 8.899427 ATCTACATCACCAGACAAAGATTATG 57.101 34.615 0.00 0.00 0.00 1.90
4905 4985 4.508461 TTTCATGTTTCTGCATGTCCTG 57.492 40.909 6.04 0.00 44.68 3.86
4949 5044 4.309099 GCGTATACCCCATTATCAAACGA 58.691 43.478 0.00 0.00 0.00 3.85
4964 5080 1.204941 CCCCTGCAGATAGGCGTATAC 59.795 57.143 17.39 0.00 36.47 1.47
4967 5083 2.507854 GCCCCTGCAGATAGGCGTA 61.508 63.158 21.55 0.00 36.47 4.42
5034 5150 3.153369 TGTTCTTATGCCCTGCAGAAA 57.847 42.857 17.39 0.00 43.65 2.52
5070 5186 7.171678 GCCTATCTCATTGTACCAATCTTGTAC 59.828 40.741 0.00 0.00 0.00 2.90
5151 5267 2.009774 CTGGAGTAAATGTTGGGAGCG 58.990 52.381 0.00 0.00 0.00 5.03
5155 5271 5.414765 GGTTAGAACTGGAGTAAATGTTGGG 59.585 44.000 0.00 0.00 0.00 4.12
5167 5283 0.323629 CGCTTGGGGTTAGAACTGGA 59.676 55.000 0.00 0.00 0.00 3.86
5272 5388 4.081697 AGCAAGGAACCGGAATTAAATTGG 60.082 41.667 9.46 0.00 0.00 3.16
5293 5409 1.362768 TCATGTGCAGTCATTCGAGC 58.637 50.000 0.00 0.00 0.00 5.03
5315 5431 5.954296 CATAGTATGCAAGCAGGCTTAAT 57.046 39.130 6.16 6.43 34.50 1.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.