Multiple sequence alignment - TraesCS5D01G189800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G189800 chr5D 100.000 7765 0 0 1 7765 291929642 291921878 0.000000e+00 14340.0
1 TraesCS5D01G189800 chr5D 89.583 144 10 3 6666 6805 59776696 59776554 2.230000e-40 178.0
2 TraesCS5D01G189800 chr5B 98.334 4742 69 8 1570 6310 332637345 332632613 0.000000e+00 8311.0
3 TraesCS5D01G189800 chr5B 93.248 859 50 4 4 861 332639200 332638349 0.000000e+00 1258.0
4 TraesCS5D01G189800 chr5B 97.639 720 9 3 862 1574 332638242 332637524 0.000000e+00 1229.0
5 TraesCS5D01G189800 chr5B 93.586 343 16 3 6302 6644 332632578 332632242 2.500000e-139 507.0
6 TraesCS5D01G189800 chr5B 76.364 550 119 9 4 549 421287158 421287700 1.280000e-72 285.0
7 TraesCS5D01G189800 chr5B 80.977 389 47 10 7357 7735 446590006 446590377 4.590000e-72 283.0
8 TraesCS5D01G189800 chr5B 80.233 86 15 2 465 549 576089011 576088927 6.500000e-06 63.9
9 TraesCS5D01G189800 chr5A 95.975 1615 57 6 1824 3434 384353074 384351464 0.000000e+00 2615.0
10 TraesCS5D01G189800 chr5A 93.938 1666 77 9 3432 5087 384349185 384347534 0.000000e+00 2495.0
11 TraesCS5D01G189800 chr5A 92.716 1263 68 11 5070 6310 384347236 384345976 0.000000e+00 1801.0
12 TraesCS5D01G189800 chr5A 94.810 790 22 6 893 1676 384354214 384353438 0.000000e+00 1214.0
13 TraesCS5D01G189800 chr5A 87.453 797 73 13 1 779 384355575 384354788 0.000000e+00 893.0
14 TraesCS5D01G189800 chr5A 95.072 345 16 1 6300 6644 384345944 384345601 6.850000e-150 542.0
15 TraesCS5D01G189800 chr5A 84.181 354 19 12 7357 7710 343767728 343767412 7.570000e-80 309.0
16 TraesCS5D01G189800 chr5A 83.077 195 28 3 6705 6895 338375882 338375689 1.040000e-38 172.0
17 TraesCS5D01G189800 chrUn 100.000 391 0 0 2713 3103 479906590 479906980 0.000000e+00 723.0
18 TraesCS5D01G189800 chr7B 84.056 646 70 16 6695 7328 732598262 732598886 6.710000e-165 592.0
19 TraesCS5D01G189800 chr7B 97.561 41 1 0 6473 6513 350972682 350972722 3.890000e-08 71.3
20 TraesCS5D01G189800 chr7B 88.136 59 4 3 6462 6518 734380644 734380701 5.030000e-07 67.6
21 TraesCS5D01G189800 chr1A 88.753 409 29 5 7356 7754 428159517 428159918 1.170000e-132 484.0
22 TraesCS5D01G189800 chr3B 87.321 418 27 7 7356 7754 651537881 651538291 9.180000e-124 455.0
23 TraesCS5D01G189800 chr3B 86.446 332 33 6 6763 7085 119422186 119422514 3.450000e-93 353.0
24 TraesCS5D01G189800 chr3B 88.947 190 14 2 7172 7355 119460600 119460788 2.180000e-55 228.0
25 TraesCS5D01G189800 chr3B 84.426 122 16 1 7174 7295 7294089 7294207 4.920000e-22 117.0
26 TraesCS5D01G189800 chr3B 100.000 33 0 0 6749 6781 773161378 773161410 2.340000e-05 62.1
27 TraesCS5D01G189800 chr4B 85.185 432 35 13 7345 7754 563363490 563363066 4.330000e-112 416.0
28 TraesCS5D01G189800 chr7D 84.478 393 40 10 7354 7735 394242402 394242784 1.230000e-97 368.0
29 TraesCS5D01G189800 chr4D 87.029 239 23 3 7357 7594 139348340 139348109 5.980000e-66 263.0
30 TraesCS5D01G189800 chr1B 80.524 267 34 12 7472 7735 467459976 467459725 1.030000e-43 189.0
31 TraesCS5D01G189800 chr1B 95.455 44 2 0 6472 6515 22328223 22328180 3.890000e-08 71.3
32 TraesCS5D01G189800 chr1D 77.580 281 51 9 54 331 463169023 463169294 8.060000e-35 159.0
33 TraesCS5D01G189800 chr1D 95.122 41 2 0 6475 6515 101285232 101285192 1.810000e-06 65.8
34 TraesCS5D01G189800 chr7A 77.436 195 36 6 7359 7552 399518665 399518478 8.240000e-20 110.0
35 TraesCS5D01G189800 chr7A 97.727 44 1 0 6472 6515 509222368 509222411 8.350000e-10 76.8
36 TraesCS5D01G189800 chr2D 75.000 240 48 10 6678 6911 645881603 645881370 4.960000e-17 100.0
37 TraesCS5D01G189800 chr3D 75.135 185 36 8 6700 6878 579109081 579109261 2.320000e-10 78.7
38 TraesCS5D01G189800 chr3A 97.727 44 1 0 6472 6515 401201991 401201948 8.350000e-10 76.8
39 TraesCS5D01G189800 chr6D 93.182 44 3 0 6472 6515 353037683 353037726 1.810000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G189800 chr5D 291921878 291929642 7764 True 14340.000000 14340 100.000000 1 7765 1 chr5D.!!$R2 7764
1 TraesCS5D01G189800 chr5B 332632242 332639200 6958 True 2826.250000 8311 95.701750 4 6644 4 chr5B.!!$R2 6640
2 TraesCS5D01G189800 chr5B 421287158 421287700 542 False 285.000000 285 76.364000 4 549 1 chr5B.!!$F1 545
3 TraesCS5D01G189800 chr5A 384345601 384355575 9974 True 1593.333333 2615 93.327333 1 6644 6 chr5A.!!$R3 6643
4 TraesCS5D01G189800 chr7B 732598262 732598886 624 False 592.000000 592 84.056000 6695 7328 1 chr7B.!!$F2 633

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
586 605 0.891904 GGGTGGCGGCTGAAAAAGTA 60.892 55.000 11.43 0.00 0.00 2.24 F
933 1542 2.234908 ACATCTTTCTCCACCTTCGAGG 59.765 50.000 0.03 0.03 42.49 4.63 F
1232 1852 3.054802 CCTGGAGAGCATAAAGGACACTT 60.055 47.826 0.00 0.00 38.99 3.16 F
1613 2415 4.470304 ACATGTCTTAGTAGGGTTCCCTTC 59.530 45.833 16.05 10.89 37.64 3.46 F
3305 4327 3.981071 CAGACATGGAACCTTACCTCA 57.019 47.619 0.00 0.00 0.00 3.86 F
4412 7718 4.962155 ACTTCGTTTCTTGAACCTCTCAT 58.038 39.130 0.00 0.00 34.67 2.90 F
6061 9712 0.322008 CCTCTCAGCTTGGTTGGGTC 60.322 60.000 0.00 0.00 0.00 4.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2099 3121 1.134551 TGCTCGTGCTACATGCCATAA 60.135 47.619 11.19 0.0 42.00 1.90 R
2461 3483 6.317088 CGACACTTTTCTGCATTATCATGTT 58.683 36.000 0.00 0.0 32.28 2.71 R
3305 4327 9.486497 CAATATACTTCTCAGCAGTTACATCAT 57.514 33.333 0.00 0.0 0.00 2.45 R
3578 6883 5.822519 TCACACTTGCTTGTAAGAGTTCATT 59.177 36.000 5.52 0.0 30.67 2.57 R
4412 7718 1.336517 CGTCGGAAGCTTAGAACACCA 60.337 52.381 0.00 0.0 0.00 4.17 R
6129 9780 1.814394 CAAAACAGGCAGAGCAGCATA 59.186 47.619 0.00 0.0 35.83 3.14 R
7239 10957 0.108138 GTCTCCAACCTCATCCACGG 60.108 60.000 0.00 0.0 0.00 4.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 0.894141 TTGTATGCGGGCAAATTGCT 59.106 45.000 18.04 0.00 44.28 3.91
111 112 4.216472 TCATCGTCATCTTATTCCTCCTCG 59.784 45.833 0.00 0.00 0.00 4.63
120 121 2.990066 ATTCCTCCTCGGATGACAAC 57.010 50.000 0.00 0.00 42.70 3.32
143 157 4.420168 GAGTCCTCAAAGTTCATCTCTCG 58.580 47.826 0.00 0.00 0.00 4.04
174 188 7.355017 TCTTCATCTTCAGTTGAAACAATTCG 58.645 34.615 2.70 0.00 38.46 3.34
186 200 6.820470 TGAAACAATTCGGTTCAATTCAAC 57.180 33.333 6.06 0.00 38.46 3.18
287 301 3.217017 CTACCAGCTAGCCGGCGA 61.217 66.667 23.20 16.40 37.29 5.54
358 373 2.825836 CAAGCCCGGTGAGATGCC 60.826 66.667 0.00 0.00 0.00 4.40
442 458 1.141053 GTATTTCAGCTCATCCCCGGT 59.859 52.381 0.00 0.00 0.00 5.28
445 461 1.617018 TTCAGCTCATCCCCGGTGAG 61.617 60.000 14.63 14.63 44.60 3.51
457 473 4.530857 GGTGAGGGCGATGGTCGG 62.531 72.222 1.29 0.00 40.84 4.79
579 598 4.715130 AGTAGGGGTGGCGGCTGA 62.715 66.667 11.43 0.00 0.00 4.26
586 605 0.891904 GGGTGGCGGCTGAAAAAGTA 60.892 55.000 11.43 0.00 0.00 2.24
723 742 5.561679 AGGAGTGAACTAAAAAGCCCTTAG 58.438 41.667 0.00 0.00 33.41 2.18
933 1542 2.234908 ACATCTTTCTCCACCTTCGAGG 59.765 50.000 0.03 0.03 42.49 4.63
1232 1852 3.054802 CCTGGAGAGCATAAAGGACACTT 60.055 47.826 0.00 0.00 38.99 3.16
1613 2415 4.470304 ACATGTCTTAGTAGGGTTCCCTTC 59.530 45.833 16.05 10.89 37.64 3.46
1837 2854 4.830046 TGCAAGTTGGCTATCTTTTTACCA 59.170 37.500 4.75 0.00 34.04 3.25
1838 2855 5.480073 TGCAAGTTGGCTATCTTTTTACCAT 59.520 36.000 4.75 0.00 34.04 3.55
2711 3733 8.894409 TTACAATCAATTAAGAATGCTGTTCG 57.106 30.769 0.00 0.00 0.00 3.95
3305 4327 3.981071 CAGACATGGAACCTTACCTCA 57.019 47.619 0.00 0.00 0.00 3.86
4412 7718 4.962155 ACTTCGTTTCTTGAACCTCTCAT 58.038 39.130 0.00 0.00 34.67 2.90
4823 8129 0.401738 CAGCTCTGGAAGTTCCCCAA 59.598 55.000 19.42 3.80 35.03 4.12
4872 8178 7.764443 TGAGCAGGTCAGATTAAGTATTGTTAC 59.236 37.037 0.00 0.00 0.00 2.50
5164 8813 3.753272 TGCTGAAGAAGTGATACCTTTGC 59.247 43.478 0.00 0.00 0.00 3.68
5167 8816 5.142061 TGAAGAAGTGATACCTTTGCGTA 57.858 39.130 0.00 0.00 0.00 4.42
5331 8980 6.777782 TCAAATGGGGCAGTCAATTATTTTT 58.222 32.000 0.00 0.00 0.00 1.94
5637 9287 8.807948 AGCTTTAAAATAGCATAACAAGGAGA 57.192 30.769 0.74 0.00 41.11 3.71
5776 9427 7.117812 CGTGTGAGTTTTGATAGGTACTCAATT 59.882 37.037 5.46 0.00 45.94 2.32
6006 9657 6.373774 GTCCAACTGATTGAATGTTCTCTCAT 59.626 38.462 0.00 0.00 38.15 2.90
6061 9712 0.322008 CCTCTCAGCTTGGTTGGGTC 60.322 60.000 0.00 0.00 0.00 4.46
6092 9743 2.046292 TCGGTGATGAGATTGGCCATA 58.954 47.619 6.09 0.00 0.00 2.74
6129 9780 5.148651 AGAGATTGTTGCCTAACTACGTT 57.851 39.130 0.00 0.00 37.68 3.99
6290 9941 4.072131 TCTGTTAGATGGTTGCCTGAAAC 58.928 43.478 0.00 0.00 0.00 2.78
6294 9945 3.350219 AGATGGTTGCCTGAAACGTAT 57.650 42.857 0.00 0.00 0.00 3.06
6296 9947 2.552599 TGGTTGCCTGAAACGTATCA 57.447 45.000 0.00 0.00 0.00 2.15
6297 9948 3.066291 TGGTTGCCTGAAACGTATCAT 57.934 42.857 0.00 0.00 0.00 2.45
6298 9949 3.006940 TGGTTGCCTGAAACGTATCATC 58.993 45.455 0.00 0.00 0.00 2.92
6309 10002 5.238432 TGAAACGTATCATCTGTTGTGCTTT 59.762 36.000 0.00 0.00 0.00 3.51
6341 10034 4.791088 GCTGAGTTCTCCTTCAAAACTTGC 60.791 45.833 0.00 0.00 33.54 4.01
6344 10037 4.786425 AGTTCTCCTTCAAAACTTGCTCT 58.214 39.130 0.00 0.00 29.09 4.09
6379 10072 2.099141 TGGCGTTGATCTCTTTCCAG 57.901 50.000 0.00 0.00 0.00 3.86
6455 10148 5.507974 TGTTATCGAGTTGAGCTATACACG 58.492 41.667 10.04 10.04 0.00 4.49
6650 10343 9.681062 TGGTATAGATAAGAAAAACTTCTTGGG 57.319 33.333 9.78 0.00 41.06 4.12
6651 10344 8.622157 GGTATAGATAAGAAAAACTTCTTGGGC 58.378 37.037 9.78 0.98 41.06 5.36
6652 10345 9.397280 GTATAGATAAGAAAAACTTCTTGGGCT 57.603 33.333 9.78 7.00 41.06 5.19
6654 10347 9.975218 ATAGATAAGAAAAACTTCTTGGGCTAA 57.025 29.630 9.78 0.00 41.06 3.09
6655 10348 8.341892 AGATAAGAAAAACTTCTTGGGCTAAG 57.658 34.615 3.92 3.92 41.06 2.18
6656 10349 5.791336 AAGAAAAACTTCTTGGGCTAAGG 57.209 39.130 10.91 0.00 39.60 2.69
6657 10350 5.061721 AGAAAAACTTCTTGGGCTAAGGA 57.938 39.130 10.91 0.34 37.01 3.36
6658 10351 5.073428 AGAAAAACTTCTTGGGCTAAGGAG 58.927 41.667 16.65 16.65 45.97 3.69
6662 10355 2.716217 CTTCTTGGGCTAAGGAGTTGG 58.284 52.381 10.60 0.00 37.26 3.77
6663 10356 2.038863 TCTTGGGCTAAGGAGTTGGA 57.961 50.000 10.91 0.00 37.01 3.53
6664 10357 1.628846 TCTTGGGCTAAGGAGTTGGAC 59.371 52.381 10.91 0.00 37.01 4.02
6665 10358 1.351017 CTTGGGCTAAGGAGTTGGACA 59.649 52.381 2.15 0.00 32.56 4.02
6666 10359 0.984230 TGGGCTAAGGAGTTGGACAG 59.016 55.000 0.00 0.00 0.00 3.51
6667 10360 1.276622 GGGCTAAGGAGTTGGACAGA 58.723 55.000 0.00 0.00 0.00 3.41
6668 10361 1.628846 GGGCTAAGGAGTTGGACAGAA 59.371 52.381 0.00 0.00 0.00 3.02
6669 10362 2.039879 GGGCTAAGGAGTTGGACAGAAA 59.960 50.000 0.00 0.00 0.00 2.52
6670 10363 3.339141 GGCTAAGGAGTTGGACAGAAAG 58.661 50.000 0.00 0.00 0.00 2.62
6671 10364 3.339141 GCTAAGGAGTTGGACAGAAAGG 58.661 50.000 0.00 0.00 0.00 3.11
6672 10365 2.959465 AAGGAGTTGGACAGAAAGGG 57.041 50.000 0.00 0.00 0.00 3.95
6673 10366 2.118403 AGGAGTTGGACAGAAAGGGA 57.882 50.000 0.00 0.00 0.00 4.20
6674 10367 1.700186 AGGAGTTGGACAGAAAGGGAC 59.300 52.381 0.00 0.00 0.00 4.46
6675 10368 1.608283 GGAGTTGGACAGAAAGGGACG 60.608 57.143 0.00 0.00 0.00 4.79
6676 10369 1.343465 GAGTTGGACAGAAAGGGACGA 59.657 52.381 0.00 0.00 0.00 4.20
6677 10370 1.766496 AGTTGGACAGAAAGGGACGAA 59.234 47.619 0.00 0.00 0.00 3.85
6678 10371 2.171870 AGTTGGACAGAAAGGGACGAAA 59.828 45.455 0.00 0.00 0.00 3.46
6679 10372 2.946990 GTTGGACAGAAAGGGACGAAAA 59.053 45.455 0.00 0.00 0.00 2.29
6680 10373 2.846193 TGGACAGAAAGGGACGAAAAG 58.154 47.619 0.00 0.00 0.00 2.27
6681 10374 2.152016 GGACAGAAAGGGACGAAAAGG 58.848 52.381 0.00 0.00 0.00 3.11
6682 10375 2.152016 GACAGAAAGGGACGAAAAGGG 58.848 52.381 0.00 0.00 0.00 3.95
6683 10376 1.772453 ACAGAAAGGGACGAAAAGGGA 59.228 47.619 0.00 0.00 0.00 4.20
6684 10377 2.224548 ACAGAAAGGGACGAAAAGGGAG 60.225 50.000 0.00 0.00 0.00 4.30
6685 10378 1.166129 GAAAGGGACGAAAAGGGAGC 58.834 55.000 0.00 0.00 0.00 4.70
6686 10379 0.476771 AAAGGGACGAAAAGGGAGCA 59.523 50.000 0.00 0.00 0.00 4.26
6687 10380 0.476771 AAGGGACGAAAAGGGAGCAA 59.523 50.000 0.00 0.00 0.00 3.91
6688 10381 0.250770 AGGGACGAAAAGGGAGCAAC 60.251 55.000 0.00 0.00 0.00 4.17
6689 10382 1.241990 GGGACGAAAAGGGAGCAACC 61.242 60.000 0.00 0.00 38.08 3.77
6690 10383 1.574702 GGACGAAAAGGGAGCAACCG 61.575 60.000 0.00 0.00 40.11 4.44
6691 10384 2.183858 GACGAAAAGGGAGCAACCGC 62.184 60.000 0.00 0.00 40.11 5.68
6692 10385 2.258013 CGAAAAGGGAGCAACCGCA 61.258 57.895 0.00 0.00 42.27 5.69
6693 10386 1.581447 GAAAAGGGAGCAACCGCAG 59.419 57.895 0.00 0.00 42.27 5.18
6700 10393 2.032681 AGCAACCGCAGAGTTCCC 59.967 61.111 0.00 0.00 42.27 3.97
6741 10435 4.292178 GATCCCTGCCTCCGCTCG 62.292 72.222 0.00 0.00 35.36 5.03
6781 10475 2.506472 GGATCCCGTTCCTCTGCC 59.494 66.667 0.00 0.00 32.68 4.85
6820 10514 1.067582 GGAATAGGTCCTGACGGCG 59.932 63.158 4.80 4.80 43.98 6.46
6839 10533 1.459592 CGTCGATTTGGTGAGGTGTTC 59.540 52.381 0.00 0.00 0.00 3.18
6843 10537 2.489971 GATTTGGTGAGGTGTTCGTCA 58.510 47.619 0.00 0.00 36.34 4.35
6852 10546 2.222592 GTGTTCGTCACCGTTCTGG 58.777 57.895 3.00 0.00 46.41 3.86
6864 10558 5.469084 GTCACCGTTCTGGAAAAATAAGTCT 59.531 40.000 0.00 0.00 42.00 3.24
6913 10616 1.652012 CATGTGGACGGCGTGTTTT 59.348 52.632 21.19 0.00 0.00 2.43
6917 10620 3.944233 GGACGGCGTGTTTTGCGT 61.944 61.111 21.19 0.00 0.00 5.24
6918 10621 2.720750 GACGGCGTGTTTTGCGTG 60.721 61.111 21.19 0.00 0.00 5.34
6919 10622 3.158011 GACGGCGTGTTTTGCGTGA 62.158 57.895 21.19 0.00 0.00 4.35
6928 10631 3.659735 GTGTTTTGCGTGACGATCTATG 58.340 45.455 10.10 0.00 0.00 2.23
6940 10643 0.173708 GATCTATGGATCGGCCGGTC 59.826 60.000 30.63 30.63 38.91 4.79
6942 10645 2.520020 TATGGATCGGCCGGTCGT 60.520 61.111 30.96 23.65 40.66 4.34
6955 10658 1.674651 GGTCGTTTGGCTCCCTTCC 60.675 63.158 0.00 0.00 0.00 3.46
6965 10668 2.690881 TCCCTTCCCCATCGGTGG 60.691 66.667 8.08 8.08 45.61 4.61
6972 10675 3.849951 CCCATCGGTGGTAGCGCT 61.850 66.667 17.26 17.26 44.48 5.92
6973 10676 2.586079 CCATCGGTGGTAGCGCTG 60.586 66.667 22.90 8.02 40.83 5.18
6978 10681 2.742372 GGTGGTAGCGCTGGTGTG 60.742 66.667 22.90 0.00 0.00 3.82
6980 10683 1.738099 GTGGTAGCGCTGGTGTGAG 60.738 63.158 22.90 0.00 0.00 3.51
6984 10687 3.897681 TAGCGCTGGTGTGAGGGGA 62.898 63.158 22.90 0.00 0.00 4.81
6993 10696 1.546029 GGTGTGAGGGGAAGATTTTGC 59.454 52.381 0.00 0.00 0.00 3.68
6995 10698 2.489722 GTGTGAGGGGAAGATTTTGCTC 59.510 50.000 0.00 0.00 0.00 4.26
6996 10699 2.095461 GTGAGGGGAAGATTTTGCTCC 58.905 52.381 0.00 0.00 0.00 4.70
6999 10702 1.995542 AGGGGAAGATTTTGCTCCTCA 59.004 47.619 0.00 0.00 0.00 3.86
7004 10707 3.274288 GAAGATTTTGCTCCTCACGGAT 58.726 45.455 0.00 0.00 39.01 4.18
7059 10762 4.933064 CGGAGAGGCGGCATCGTC 62.933 72.222 13.08 7.19 42.03 4.20
7062 10765 3.200887 GAGAGGCGGCATCGTCGAT 62.201 63.158 13.08 0.75 46.91 3.59
7095 10798 2.380590 AGTATCGCTATTCCCTCCCTCT 59.619 50.000 0.00 0.00 0.00 3.69
7099 10802 1.415200 GCTATTCCCTCCCTCTTCGT 58.585 55.000 0.00 0.00 0.00 3.85
7100 10803 1.341852 GCTATTCCCTCCCTCTTCGTC 59.658 57.143 0.00 0.00 0.00 4.20
7101 10804 1.609555 CTATTCCCTCCCTCTTCGTCG 59.390 57.143 0.00 0.00 0.00 5.12
7102 10805 0.324460 ATTCCCTCCCTCTTCGTCGT 60.324 55.000 0.00 0.00 0.00 4.34
7103 10806 1.248785 TTCCCTCCCTCTTCGTCGTG 61.249 60.000 0.00 0.00 0.00 4.35
7104 10807 2.711922 CCCTCCCTCTTCGTCGTGG 61.712 68.421 0.00 0.00 0.00 4.94
7105 10808 2.182030 CTCCCTCTTCGTCGTGGC 59.818 66.667 0.00 0.00 0.00 5.01
7106 10809 2.282958 TCCCTCTTCGTCGTGGCT 60.283 61.111 0.00 0.00 0.00 4.75
7107 10810 1.878656 CTCCCTCTTCGTCGTGGCTT 61.879 60.000 0.00 0.00 0.00 4.35
7108 10811 1.446272 CCCTCTTCGTCGTGGCTTC 60.446 63.158 0.00 0.00 0.00 3.86
7109 10812 1.801913 CCTCTTCGTCGTGGCTTCG 60.802 63.158 0.00 0.00 0.00 3.79
7110 10813 1.801913 CTCTTCGTCGTGGCTTCGG 60.802 63.158 0.00 0.00 0.00 4.30
7111 10814 3.479269 CTTCGTCGTGGCTTCGGC 61.479 66.667 0.00 0.76 40.88 5.54
7116 10819 3.986006 TCGTGGCTTCGGCGACTT 61.986 61.111 10.16 0.00 45.42 3.01
7117 10820 3.479269 CGTGGCTTCGGCGACTTC 61.479 66.667 10.16 1.97 45.42 3.01
7118 10821 3.119096 GTGGCTTCGGCGACTTCC 61.119 66.667 10.16 11.74 44.45 3.46
7119 10822 4.388499 TGGCTTCGGCGACTTCCC 62.388 66.667 10.16 8.24 42.91 3.97
7121 10824 4.388499 GCTTCGGCGACTTCCCCA 62.388 66.667 10.16 0.00 0.00 4.96
7122 10825 2.584608 CTTCGGCGACTTCCCCAT 59.415 61.111 10.16 0.00 0.00 4.00
7123 10826 1.521681 CTTCGGCGACTTCCCCATC 60.522 63.158 10.16 0.00 0.00 3.51
7124 10827 1.961180 CTTCGGCGACTTCCCCATCT 61.961 60.000 10.16 0.00 0.00 2.90
7125 10828 2.202932 CGGCGACTTCCCCATCTG 60.203 66.667 0.00 0.00 0.00 2.90
7126 10829 2.514824 GGCGACTTCCCCATCTGC 60.515 66.667 0.00 0.00 0.00 4.26
7127 10830 2.892425 GCGACTTCCCCATCTGCG 60.892 66.667 0.00 0.00 0.00 5.18
7128 10831 2.892425 CGACTTCCCCATCTGCGC 60.892 66.667 0.00 0.00 0.00 6.09
7129 10832 2.586792 GACTTCCCCATCTGCGCT 59.413 61.111 9.73 0.00 0.00 5.92
7130 10833 1.522580 GACTTCCCCATCTGCGCTC 60.523 63.158 9.73 0.00 0.00 5.03
7131 10834 2.244117 GACTTCCCCATCTGCGCTCA 62.244 60.000 9.73 0.00 0.00 4.26
7147 10850 4.812476 CATCGTGGCTCCGGCGAA 62.812 66.667 9.30 0.00 38.17 4.70
7148 10851 4.077184 ATCGTGGCTCCGGCGAAA 62.077 61.111 9.30 0.00 38.17 3.46
7208 10926 0.302288 TTTGCGTGAAGTTTCGTCGG 59.698 50.000 0.00 0.00 0.00 4.79
7209 10927 2.096481 TTGCGTGAAGTTTCGTCGGC 62.096 55.000 0.00 0.00 0.00 5.54
7239 10957 3.302347 CTCCGGTGTGCTGGTCCTC 62.302 68.421 0.00 0.00 41.89 3.71
7245 10963 3.311110 GTGCTGGTCCTCCGTGGA 61.311 66.667 0.00 0.00 43.86 4.02
7253 10971 4.941609 CCTCCGTGGATGAGGTTG 57.058 61.111 0.00 0.00 43.68 3.77
7262 10980 1.909302 TGGATGAGGTTGGAGACTTCC 59.091 52.381 0.00 0.00 44.31 3.46
7302 11020 2.598394 CACAAGGGTGGTGCTGGG 60.598 66.667 0.00 0.00 41.45 4.45
7344 11062 4.785453 GCCCTCAACCCGCTCTGG 62.785 72.222 0.00 0.00 37.55 3.86
7345 11063 3.322466 CCCTCAACCCGCTCTGGT 61.322 66.667 0.00 0.00 41.55 4.00
7346 11064 2.046892 CCTCAACCCGCTCTGGTG 60.047 66.667 0.00 0.00 39.05 4.17
7347 11065 2.743718 CTCAACCCGCTCTGGTGT 59.256 61.111 0.00 0.00 39.05 4.16
7348 11066 1.669115 CTCAACCCGCTCTGGTGTG 60.669 63.158 0.00 0.00 39.05 3.82
7349 11067 3.357079 CAACCCGCTCTGGTGTGC 61.357 66.667 0.00 0.00 39.05 4.57
7354 11072 2.258591 CGCTCTGGTGTGCGTAGT 59.741 61.111 0.00 0.00 46.81 2.73
7355 11073 1.372997 CGCTCTGGTGTGCGTAGTT 60.373 57.895 0.00 0.00 46.81 2.24
7356 11074 0.109458 CGCTCTGGTGTGCGTAGTTA 60.109 55.000 0.00 0.00 46.81 2.24
7357 11075 1.469251 CGCTCTGGTGTGCGTAGTTAT 60.469 52.381 0.00 0.00 46.81 1.89
7358 11076 2.223409 CGCTCTGGTGTGCGTAGTTATA 60.223 50.000 0.00 0.00 46.81 0.98
7359 11077 3.114065 GCTCTGGTGTGCGTAGTTATAC 58.886 50.000 0.00 0.00 0.00 1.47
7360 11078 3.703420 CTCTGGTGTGCGTAGTTATACC 58.297 50.000 0.00 0.00 0.00 2.73
7361 11079 3.359033 TCTGGTGTGCGTAGTTATACCT 58.641 45.455 0.00 0.00 31.76 3.08
7362 11080 3.129813 TCTGGTGTGCGTAGTTATACCTG 59.870 47.826 0.00 0.00 31.76 4.00
7363 11081 2.166870 TGGTGTGCGTAGTTATACCTGG 59.833 50.000 0.00 0.00 31.76 4.45
7364 11082 2.199236 GTGTGCGTAGTTATACCTGGC 58.801 52.381 0.00 0.00 0.00 4.85
7365 11083 1.137479 TGTGCGTAGTTATACCTGGCC 59.863 52.381 0.00 0.00 0.00 5.36
7366 11084 1.137479 GTGCGTAGTTATACCTGGCCA 59.863 52.381 4.71 4.71 0.00 5.36
7367 11085 1.832366 TGCGTAGTTATACCTGGCCAA 59.168 47.619 7.01 0.00 0.00 4.52
7368 11086 2.236644 TGCGTAGTTATACCTGGCCAAA 59.763 45.455 7.01 0.00 0.00 3.28
7369 11087 3.118186 TGCGTAGTTATACCTGGCCAAAT 60.118 43.478 7.01 3.30 0.00 2.32
7370 11088 4.101274 TGCGTAGTTATACCTGGCCAAATA 59.899 41.667 7.01 1.86 0.00 1.40
7371 11089 4.689345 GCGTAGTTATACCTGGCCAAATAG 59.311 45.833 7.01 0.00 0.00 1.73
7372 11090 5.235516 CGTAGTTATACCTGGCCAAATAGG 58.764 45.833 7.01 7.12 40.01 2.57
7411 11129 3.729726 CCAACCTGGGTTAAACGGA 57.270 52.632 4.58 0.00 36.46 4.69
7412 11130 1.241165 CCAACCTGGGTTAAACGGAC 58.759 55.000 4.58 0.00 36.46 4.79
7413 11131 1.241165 CAACCTGGGTTAAACGGACC 58.759 55.000 4.58 0.00 36.46 4.46
7414 11132 0.845337 AACCTGGGTTAAACGGACCA 59.155 50.000 2.85 0.00 38.98 4.02
7416 11134 3.243128 CTGGGTTAAACGGACCAGG 57.757 57.895 0.00 0.00 45.21 4.45
7417 11135 0.958876 CTGGGTTAAACGGACCAGGC 60.959 60.000 0.00 0.00 45.21 4.85
7418 11136 1.073548 GGGTTAAACGGACCAGGCA 59.926 57.895 0.00 0.00 38.98 4.75
7419 11137 1.239296 GGGTTAAACGGACCAGGCAC 61.239 60.000 0.00 0.00 38.98 5.01
7420 11138 1.571215 GGTTAAACGGACCAGGCACG 61.571 60.000 1.98 1.98 37.14 5.34
7421 11139 1.301874 TTAAACGGACCAGGCACGG 60.302 57.895 8.14 0.19 0.00 4.94
7422 11140 3.887335 TAAACGGACCAGGCACGGC 62.887 63.158 8.14 0.00 0.00 5.68
7451 11169 4.988598 CGTCCAGGCACGCCAAGT 62.989 66.667 11.35 0.00 38.92 3.16
7452 11170 2.345991 GTCCAGGCACGCCAAGTA 59.654 61.111 11.35 0.00 38.92 2.24
7453 11171 1.302192 GTCCAGGCACGCCAAGTAA 60.302 57.895 11.35 0.00 38.92 2.24
7454 11172 0.676782 GTCCAGGCACGCCAAGTAAT 60.677 55.000 11.35 0.00 38.92 1.89
7455 11173 0.392461 TCCAGGCACGCCAAGTAATC 60.392 55.000 11.35 0.00 38.92 1.75
7456 11174 1.705337 CCAGGCACGCCAAGTAATCG 61.705 60.000 11.35 0.00 38.92 3.34
7457 11175 1.019278 CAGGCACGCCAAGTAATCGT 61.019 55.000 11.35 0.00 38.92 3.73
7460 11178 1.423845 CACGCCAAGTAATCGTGCC 59.576 57.895 1.09 0.00 45.22 5.01
7461 11179 2.098233 ACGCCAAGTAATCGTGCCG 61.098 57.895 0.00 0.00 34.92 5.69
7462 11180 2.098233 CGCCAAGTAATCGTGCCGT 61.098 57.895 0.00 0.00 0.00 5.68
7463 11181 1.423845 GCCAAGTAATCGTGCCGTG 59.576 57.895 0.00 0.00 0.00 4.94
7464 11182 1.977594 GCCAAGTAATCGTGCCGTGG 61.978 60.000 0.00 0.00 0.00 4.94
7465 11183 1.423845 CAAGTAATCGTGCCGTGGC 59.576 57.895 3.30 3.30 42.35 5.01
7466 11184 2.098233 AAGTAATCGTGCCGTGGCG 61.098 57.895 6.37 0.00 45.51 5.69
7502 11220 4.106925 CCTCTCTGGCCCAGGCAC 62.107 72.222 11.68 0.50 44.11 5.01
7503 11221 4.463879 CTCTCTGGCCCAGGCACG 62.464 72.222 11.68 0.35 44.11 5.34
7517 11235 4.028490 CACGGCCCCCTTGCTACA 62.028 66.667 0.00 0.00 0.00 2.74
7518 11236 3.015145 ACGGCCCCCTTGCTACAT 61.015 61.111 0.00 0.00 0.00 2.29
7519 11237 2.516930 CGGCCCCCTTGCTACATG 60.517 66.667 0.00 0.00 0.00 3.21
7520 11238 2.123726 GGCCCCCTTGCTACATGG 60.124 66.667 0.00 0.00 0.00 3.66
7521 11239 2.123726 GCCCCCTTGCTACATGGG 60.124 66.667 10.79 10.79 45.17 4.00
7522 11240 2.123726 CCCCCTTGCTACATGGGC 60.124 66.667 12.02 1.45 44.51 5.36
7523 11241 2.693871 CCCCCTTGCTACATGGGCT 61.694 63.158 12.02 0.00 44.51 5.19
7524 11242 1.454479 CCCCTTGCTACATGGGCTG 60.454 63.158 12.02 6.89 44.51 4.85
7525 11243 1.454479 CCCTTGCTACATGGGCTGG 60.454 63.158 12.78 13.27 40.98 4.85
7526 11244 2.123428 CCTTGCTACATGGGCTGGC 61.123 63.158 12.78 0.00 0.00 4.85
7527 11245 1.378911 CTTGCTACATGGGCTGGCA 60.379 57.895 12.78 2.10 0.00 4.92
7528 11246 1.660560 CTTGCTACATGGGCTGGCAC 61.661 60.000 12.78 0.00 32.47 5.01
7529 11247 3.204827 GCTACATGGGCTGGCACG 61.205 66.667 2.88 0.00 0.00 5.34
7530 11248 2.514592 CTACATGGGCTGGCACGG 60.515 66.667 2.88 0.00 38.10 4.94
7554 11272 4.129737 GTCTAGCACGCCGGCAGA 62.130 66.667 28.98 18.52 35.83 4.26
7555 11273 3.826754 TCTAGCACGCCGGCAGAG 61.827 66.667 28.98 18.18 35.83 3.35
7567 11285 3.461773 GCAGAGCTGGCCCGAGTA 61.462 66.667 0.00 0.00 0.00 2.59
7568 11286 2.811101 CAGAGCTGGCCCGAGTAG 59.189 66.667 0.00 0.00 0.00 2.57
7569 11287 2.443016 AGAGCTGGCCCGAGTAGG 60.443 66.667 0.00 0.00 40.63 3.18
7577 11295 3.066190 CCCGAGTAGGCACGTCCA 61.066 66.667 6.78 0.00 39.21 4.02
7578 11296 2.490217 CCGAGTAGGCACGTCCAG 59.510 66.667 6.78 0.00 37.29 3.86
7579 11297 2.490217 CGAGTAGGCACGTCCAGG 59.510 66.667 6.78 0.00 37.29 4.45
7580 11298 2.341101 CGAGTAGGCACGTCCAGGT 61.341 63.158 6.78 0.00 37.29 4.00
7581 11299 1.028330 CGAGTAGGCACGTCCAGGTA 61.028 60.000 6.78 0.00 37.29 3.08
7582 11300 0.455005 GAGTAGGCACGTCCAGGTAC 59.545 60.000 6.78 0.00 37.29 3.34
7583 11301 0.251474 AGTAGGCACGTCCAGGTACA 60.251 55.000 6.78 0.00 37.29 2.90
7584 11302 0.822164 GTAGGCACGTCCAGGTACAT 59.178 55.000 6.78 0.00 37.29 2.29
7585 11303 2.026641 GTAGGCACGTCCAGGTACATA 58.973 52.381 6.78 0.00 37.29 2.29
7586 11304 0.822164 AGGCACGTCCAGGTACATAC 59.178 55.000 6.78 0.00 37.29 2.39
7587 11305 0.533491 GGCACGTCCAGGTACATACA 59.467 55.000 0.00 0.00 34.01 2.29
7588 11306 1.138266 GGCACGTCCAGGTACATACAT 59.862 52.381 0.00 0.00 34.01 2.29
7589 11307 2.470821 GCACGTCCAGGTACATACATC 58.529 52.381 0.00 0.00 0.00 3.06
7590 11308 2.727777 CACGTCCAGGTACATACATCG 58.272 52.381 0.00 0.00 0.00 3.84
7591 11309 2.356695 CACGTCCAGGTACATACATCGA 59.643 50.000 0.00 0.00 0.00 3.59
7592 11310 3.004419 CACGTCCAGGTACATACATCGAT 59.996 47.826 0.00 0.00 0.00 3.59
7593 11311 3.252701 ACGTCCAGGTACATACATCGATC 59.747 47.826 0.00 0.00 0.00 3.69
7594 11312 3.667166 CGTCCAGGTACATACATCGATCG 60.667 52.174 9.36 9.36 0.00 3.69
7595 11313 3.252701 GTCCAGGTACATACATCGATCGT 59.747 47.826 15.94 0.01 0.00 3.73
7596 11314 3.887110 TCCAGGTACATACATCGATCGTT 59.113 43.478 15.94 3.47 0.00 3.85
7597 11315 3.981416 CCAGGTACATACATCGATCGTTG 59.019 47.826 21.53 21.53 0.00 4.10
7598 11316 3.981416 CAGGTACATACATCGATCGTTGG 59.019 47.826 25.43 14.44 0.00 3.77
7599 11317 2.729882 GGTACATACATCGATCGTTGGC 59.270 50.000 25.43 10.97 0.00 4.52
7600 11318 2.890808 ACATACATCGATCGTTGGCT 57.109 45.000 25.43 12.40 0.00 4.75
7601 11319 2.473816 ACATACATCGATCGTTGGCTG 58.526 47.619 25.43 22.34 0.00 4.85
7602 11320 2.159099 ACATACATCGATCGTTGGCTGT 60.159 45.455 25.43 22.85 0.00 4.40
7603 11321 2.665649 TACATCGATCGTTGGCTGTT 57.334 45.000 25.43 10.34 0.00 3.16
7604 11322 1.808411 ACATCGATCGTTGGCTGTTT 58.192 45.000 25.43 5.25 0.00 2.83
7605 11323 2.151202 ACATCGATCGTTGGCTGTTTT 58.849 42.857 25.43 4.61 0.00 2.43
7606 11324 2.159627 ACATCGATCGTTGGCTGTTTTC 59.840 45.455 25.43 0.00 0.00 2.29
7607 11325 2.163818 TCGATCGTTGGCTGTTTTCT 57.836 45.000 15.94 0.00 0.00 2.52
7608 11326 3.306917 TCGATCGTTGGCTGTTTTCTA 57.693 42.857 15.94 0.00 0.00 2.10
7609 11327 3.250744 TCGATCGTTGGCTGTTTTCTAG 58.749 45.455 15.94 0.00 0.00 2.43
7610 11328 3.057104 TCGATCGTTGGCTGTTTTCTAGA 60.057 43.478 15.94 0.00 0.00 2.43
7611 11329 3.678072 CGATCGTTGGCTGTTTTCTAGAA 59.322 43.478 7.03 0.00 0.00 2.10
7612 11330 4.151689 CGATCGTTGGCTGTTTTCTAGAAA 59.848 41.667 13.99 13.99 0.00 2.52
7613 11331 5.333798 CGATCGTTGGCTGTTTTCTAGAAAA 60.334 40.000 23.65 23.65 37.90 2.29
7614 11332 5.821516 TCGTTGGCTGTTTTCTAGAAAAA 57.178 34.783 27.81 17.95 41.37 1.94
7615 11333 5.575019 TCGTTGGCTGTTTTCTAGAAAAAC 58.425 37.500 27.81 20.27 41.37 2.43
7616 11334 5.124138 TCGTTGGCTGTTTTCTAGAAAAACA 59.876 36.000 27.81 24.01 44.85 2.83
7617 11335 5.977129 CGTTGGCTGTTTTCTAGAAAAACAT 59.023 36.000 27.81 0.00 45.56 2.71
7618 11336 6.142320 CGTTGGCTGTTTTCTAGAAAAACATC 59.858 38.462 27.81 21.33 45.56 3.06
7619 11337 5.757886 TGGCTGTTTTCTAGAAAAACATCG 58.242 37.500 27.81 17.77 45.56 3.84
7620 11338 5.529430 TGGCTGTTTTCTAGAAAAACATCGA 59.471 36.000 27.81 17.94 45.56 3.59
7621 11339 6.206634 TGGCTGTTTTCTAGAAAAACATCGAT 59.793 34.615 27.81 0.00 45.56 3.59
7622 11340 6.743172 GGCTGTTTTCTAGAAAAACATCGATC 59.257 38.462 27.81 15.42 45.56 3.69
7623 11341 6.462949 GCTGTTTTCTAGAAAAACATCGATCG 59.537 38.462 27.81 9.36 45.56 3.69
7624 11342 7.416154 TGTTTTCTAGAAAAACATCGATCGT 57.584 32.000 27.81 0.00 42.96 3.73
7625 11343 7.857569 TGTTTTCTAGAAAAACATCGATCGTT 58.142 30.769 27.81 3.47 42.96 3.85
7626 11344 7.796660 TGTTTTCTAGAAAAACATCGATCGTTG 59.203 33.333 27.81 21.53 42.96 4.10
7627 11345 7.416154 TTTCTAGAAAAACATCGATCGTTGT 57.584 32.000 22.77 22.77 0.00 3.32
7628 11346 6.627690 TCTAGAAAAACATCGATCGTTGTC 57.372 37.500 27.00 16.73 0.00 3.18
7629 11347 4.663636 AGAAAAACATCGATCGTTGTCC 57.336 40.909 27.00 17.55 0.00 4.02
7630 11348 3.435671 AGAAAAACATCGATCGTTGTCCC 59.564 43.478 27.00 17.28 0.00 4.46
7631 11349 1.355971 AAACATCGATCGTTGTCCCG 58.644 50.000 27.00 5.73 0.00 5.14
7632 11350 0.245539 AACATCGATCGTTGTCCCGT 59.754 50.000 27.00 12.55 0.00 5.28
7633 11351 0.245539 ACATCGATCGTTGTCCCGTT 59.754 50.000 22.77 2.91 0.00 4.44
7634 11352 0.645355 CATCGATCGTTGTCCCGTTG 59.355 55.000 15.94 0.00 0.00 4.10
7635 11353 0.459585 ATCGATCGTTGTCCCGTTGG 60.460 55.000 15.94 0.00 0.00 3.77
7636 11354 2.736682 CGATCGTTGTCCCGTTGGC 61.737 63.158 7.03 0.00 0.00 4.52
7637 11355 1.375523 GATCGTTGTCCCGTTGGCT 60.376 57.895 0.00 0.00 0.00 4.75
7638 11356 1.359459 GATCGTTGTCCCGTTGGCTC 61.359 60.000 0.00 0.00 0.00 4.70
7639 11357 1.827399 ATCGTTGTCCCGTTGGCTCT 61.827 55.000 0.00 0.00 0.00 4.09
7640 11358 2.317609 CGTTGTCCCGTTGGCTCTG 61.318 63.158 0.00 0.00 0.00 3.35
7641 11359 1.966451 GTTGTCCCGTTGGCTCTGG 60.966 63.158 0.00 0.00 0.00 3.86
7642 11360 2.144078 TTGTCCCGTTGGCTCTGGA 61.144 57.895 0.00 0.00 0.00 3.86
7643 11361 1.488705 TTGTCCCGTTGGCTCTGGAT 61.489 55.000 0.00 0.00 0.00 3.41
7644 11362 1.153349 GTCCCGTTGGCTCTGGATC 60.153 63.158 0.00 0.00 0.00 3.36
7645 11363 2.202932 CCCGTTGGCTCTGGATCG 60.203 66.667 0.00 0.00 0.00 3.69
7646 11364 2.892425 CCGTTGGCTCTGGATCGC 60.892 66.667 0.00 0.00 0.00 4.58
7647 11365 2.185350 CGTTGGCTCTGGATCGCT 59.815 61.111 0.00 0.00 0.00 4.93
7648 11366 1.437573 CGTTGGCTCTGGATCGCTA 59.562 57.895 0.00 0.00 0.00 4.26
7649 11367 0.872021 CGTTGGCTCTGGATCGCTAC 60.872 60.000 0.00 0.00 0.00 3.58
7650 11368 0.530870 GTTGGCTCTGGATCGCTACC 60.531 60.000 0.00 0.00 0.00 3.18
7651 11369 0.687757 TTGGCTCTGGATCGCTACCT 60.688 55.000 0.00 0.00 0.00 3.08
7652 11370 1.109920 TGGCTCTGGATCGCTACCTC 61.110 60.000 0.00 0.00 0.00 3.85
7653 11371 1.284408 GCTCTGGATCGCTACCTCG 59.716 63.158 0.00 0.00 0.00 4.63
7654 11372 1.448922 GCTCTGGATCGCTACCTCGT 61.449 60.000 0.00 0.00 0.00 4.18
7655 11373 1.025812 CTCTGGATCGCTACCTCGTT 58.974 55.000 0.00 0.00 0.00 3.85
7656 11374 0.738975 TCTGGATCGCTACCTCGTTG 59.261 55.000 0.00 0.00 0.00 4.10
7657 11375 0.249073 CTGGATCGCTACCTCGTTGG 60.249 60.000 0.00 0.00 42.93 3.77
7658 11376 1.591863 GGATCGCTACCTCGTTGGC 60.592 63.158 0.00 0.00 40.22 4.52
7659 11377 1.141019 GATCGCTACCTCGTTGGCA 59.859 57.895 0.00 0.00 40.22 4.92
7660 11378 0.249489 GATCGCTACCTCGTTGGCAT 60.249 55.000 0.00 0.00 40.22 4.40
7661 11379 0.249489 ATCGCTACCTCGTTGGCATC 60.249 55.000 0.00 0.00 40.22 3.91
7662 11380 2.230940 CGCTACCTCGTTGGCATCG 61.231 63.158 11.58 11.58 40.22 3.84
7663 11381 2.526120 GCTACCTCGTTGGCATCGC 61.526 63.158 12.89 0.00 40.22 4.58
7664 11382 1.141881 CTACCTCGTTGGCATCGCT 59.858 57.895 12.89 1.27 40.22 4.93
7665 11383 1.148157 CTACCTCGTTGGCATCGCTG 61.148 60.000 12.89 8.66 40.22 5.18
7666 11384 2.572095 TACCTCGTTGGCATCGCTGG 62.572 60.000 20.20 20.20 40.22 4.85
7667 11385 2.125552 CTCGTTGGCATCGCTGGA 60.126 61.111 12.89 0.00 0.00 3.86
7668 11386 1.522355 CTCGTTGGCATCGCTGGAT 60.522 57.895 12.89 0.00 0.00 3.41
7669 11387 1.078497 TCGTTGGCATCGCTGGATT 60.078 52.632 12.89 0.00 0.00 3.01
7670 11388 0.176910 TCGTTGGCATCGCTGGATTA 59.823 50.000 12.89 0.00 0.00 1.75
7671 11389 1.013596 CGTTGGCATCGCTGGATTAA 58.986 50.000 4.88 0.00 0.00 1.40
7672 11390 1.400142 CGTTGGCATCGCTGGATTAAA 59.600 47.619 4.88 0.00 0.00 1.52
7673 11391 2.159448 CGTTGGCATCGCTGGATTAAAA 60.159 45.455 4.88 0.00 0.00 1.52
7674 11392 3.671971 CGTTGGCATCGCTGGATTAAAAA 60.672 43.478 4.88 0.00 0.00 1.94
7692 11410 3.874392 AAAAAGAGAATCATTGGCCGG 57.126 42.857 0.00 0.00 37.82 6.13
7693 11411 1.106285 AAAGAGAATCATTGGCCGGC 58.894 50.000 21.18 21.18 37.82 6.13
7694 11412 0.753111 AAGAGAATCATTGGCCGGCC 60.753 55.000 39.40 39.40 37.82 6.13
7695 11413 2.516930 AGAATCATTGGCCGGCCG 60.517 61.111 39.00 25.79 39.42 6.13
7696 11414 4.270376 GAATCATTGGCCGGCCGC 62.270 66.667 39.00 18.70 39.42 6.53
7714 11432 4.969196 CCGTGACCGTGTGCAGCT 62.969 66.667 0.00 0.00 0.00 4.24
7715 11433 3.406361 CGTGACCGTGTGCAGCTC 61.406 66.667 0.00 0.00 0.00 4.09
7716 11434 3.044305 GTGACCGTGTGCAGCTCC 61.044 66.667 0.00 0.00 0.00 4.70
7717 11435 3.545574 TGACCGTGTGCAGCTCCA 61.546 61.111 0.00 0.00 0.00 3.86
7718 11436 3.044305 GACCGTGTGCAGCTCCAC 61.044 66.667 0.00 0.00 36.28 4.02
7719 11437 3.807631 GACCGTGTGCAGCTCCACA 62.808 63.158 6.32 6.32 42.99 4.17
7720 11438 3.046087 CCGTGTGCAGCTCCACAG 61.046 66.667 11.69 5.52 45.54 3.66
7721 11439 2.280389 CGTGTGCAGCTCCACAGT 60.280 61.111 11.69 0.00 45.54 3.55
7722 11440 2.601398 CGTGTGCAGCTCCACAGTG 61.601 63.158 11.69 2.87 45.54 3.66
7723 11441 2.592574 TGTGCAGCTCCACAGTGC 60.593 61.111 6.32 0.00 40.55 4.40
7724 11442 3.720193 GTGCAGCTCCACAGTGCG 61.720 66.667 1.93 0.00 40.23 5.34
7727 11445 4.994471 CAGCTCCACAGTGCGCCA 62.994 66.667 4.18 0.00 37.57 5.69
7728 11446 4.694233 AGCTCCACAGTGCGCCAG 62.694 66.667 4.18 0.00 37.57 4.85
7729 11447 4.996434 GCTCCACAGTGCGCCAGT 62.996 66.667 4.18 0.00 0.00 4.00
7730 11448 3.046087 CTCCACAGTGCGCCAGTG 61.046 66.667 4.18 11.02 40.31 3.66
7742 11460 3.506096 CCAGTGCGCTCATGCCAG 61.506 66.667 9.73 0.00 35.36 4.85
7743 11461 2.435410 CAGTGCGCTCATGCCAGA 60.435 61.111 9.73 0.00 35.36 3.86
7744 11462 2.125229 AGTGCGCTCATGCCAGAG 60.125 61.111 9.73 0.00 38.68 3.35
7745 11463 2.435586 GTGCGCTCATGCCAGAGT 60.436 61.111 9.73 0.00 37.94 3.24
7746 11464 2.125391 TGCGCTCATGCCAGAGTC 60.125 61.111 9.73 0.00 37.94 3.36
7747 11465 2.125391 GCGCTCATGCCAGAGTCA 60.125 61.111 0.00 0.00 37.94 3.41
7748 11466 1.742880 GCGCTCATGCCAGAGTCAA 60.743 57.895 0.00 0.00 37.94 3.18
7749 11467 1.975363 GCGCTCATGCCAGAGTCAAC 61.975 60.000 0.00 0.00 37.94 3.18
7750 11468 0.671472 CGCTCATGCCAGAGTCAACA 60.671 55.000 4.67 0.00 37.94 3.33
7751 11469 1.747709 GCTCATGCCAGAGTCAACAT 58.252 50.000 4.67 0.00 37.94 2.71
7752 11470 1.669779 GCTCATGCCAGAGTCAACATC 59.330 52.381 4.67 0.00 37.94 3.06
7753 11471 1.931841 CTCATGCCAGAGTCAACATCG 59.068 52.381 0.00 0.00 0.00 3.84
7754 11472 1.012086 CATGCCAGAGTCAACATCGG 58.988 55.000 0.00 0.00 0.00 4.18
7755 11473 0.745845 ATGCCAGAGTCAACATCGGC 60.746 55.000 0.00 0.00 37.09 5.54
7756 11474 2.109126 GCCAGAGTCAACATCGGCC 61.109 63.158 0.00 0.00 33.26 6.13
7757 11475 1.296392 CCAGAGTCAACATCGGCCA 59.704 57.895 2.24 0.00 0.00 5.36
7758 11476 0.321564 CCAGAGTCAACATCGGCCAA 60.322 55.000 2.24 0.00 0.00 4.52
7759 11477 1.522668 CAGAGTCAACATCGGCCAAA 58.477 50.000 2.24 0.00 0.00 3.28
7760 11478 1.197721 CAGAGTCAACATCGGCCAAAC 59.802 52.381 2.24 0.00 0.00 2.93
7761 11479 0.521735 GAGTCAACATCGGCCAAACC 59.478 55.000 2.24 0.00 0.00 3.27
7762 11480 0.110486 AGTCAACATCGGCCAAACCT 59.890 50.000 2.24 0.00 35.61 3.50
7763 11481 0.240945 GTCAACATCGGCCAAACCTG 59.759 55.000 2.24 0.00 35.61 4.00
7764 11482 0.179004 TCAACATCGGCCAAACCTGT 60.179 50.000 2.24 0.00 35.61 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 2.597805 GCGGCCGAGGAGAGGATA 60.598 66.667 33.48 0.00 0.00 2.59
120 121 4.420168 GAGAGATGAACTTTGAGGACTCG 58.580 47.826 0.00 0.00 0.00 4.18
143 157 0.107945 ACTGAAGATGAAGAGGCCGC 60.108 55.000 0.00 0.00 0.00 6.53
174 188 5.415221 TGTTTTGTCCAGTTGAATTGAACC 58.585 37.500 4.01 0.00 0.00 3.62
220 234 7.137490 ACGTTTTGCCTAGGTAAGTATTTTC 57.863 36.000 12.38 0.09 0.00 2.29
229 243 3.560896 GTGTTCAACGTTTTGCCTAGGTA 59.439 43.478 11.31 2.03 32.17 3.08
287 301 0.107831 TGCTAGTTTGGGCTCAACGT 59.892 50.000 0.00 0.00 31.78 3.99
358 373 0.245539 TCTTTCTCGTTGGCTACCCG 59.754 55.000 0.00 0.00 0.00 5.28
579 598 5.447624 AGTAAACATTGCGCCTACTTTTT 57.552 34.783 4.18 0.00 0.00 1.94
586 605 1.644786 GCCGAGTAAACATTGCGCCT 61.645 55.000 4.18 0.00 0.00 5.52
695 714 5.411977 GGGCTTTTTAGTTCACTCCTCTAAC 59.588 44.000 0.00 0.00 0.00 2.34
723 742 3.507622 ACTCAAGTCTAAATTTGGGCTGC 59.492 43.478 9.62 0.00 0.00 5.25
730 749 8.112183 AGATCATCCCAACTCAAGTCTAAATTT 58.888 33.333 0.00 0.00 0.00 1.82
989 1598 6.833839 TCCACCGAGTTATTTGTTATTTTCG 58.166 36.000 0.00 0.00 0.00 3.46
1232 1852 2.565834 GCAGGTCTTCTAGGTACACCAA 59.434 50.000 0.38 0.00 38.89 3.67
1652 2454 3.364441 GTGCGCCATCAACCAGCA 61.364 61.111 4.18 0.00 35.27 4.41
2099 3121 1.134551 TGCTCGTGCTACATGCCATAA 60.135 47.619 11.19 0.00 42.00 1.90
2461 3483 6.317088 CGACACTTTTCTGCATTATCATGTT 58.683 36.000 0.00 0.00 32.28 2.71
3305 4327 9.486497 CAATATACTTCTCAGCAGTTACATCAT 57.514 33.333 0.00 0.00 0.00 2.45
3562 6867 9.823647 AAGAGTTCATTCGAATACACTGATATT 57.176 29.630 20.65 10.53 32.61 1.28
3577 6882 6.017934 TCACACTTGCTTGTAAGAGTTCATTC 60.018 38.462 5.52 0.00 30.67 2.67
3578 6883 5.822519 TCACACTTGCTTGTAAGAGTTCATT 59.177 36.000 5.52 0.00 30.67 2.57
3758 7064 6.484643 GCATTGAATATTTCTCCAGCAGTCTA 59.515 38.462 0.00 0.00 0.00 2.59
3976 7282 5.932303 TGTACCACTAGTCTTGAAAATGAGC 59.068 40.000 0.00 0.00 0.00 4.26
4412 7718 1.336517 CGTCGGAAGCTTAGAACACCA 60.337 52.381 0.00 0.00 0.00 4.17
4823 8129 3.005155 GCTTGCTCTGAAAATTGGTGAGT 59.995 43.478 0.00 0.00 0.00 3.41
4872 8178 1.617850 CCTCCGGAATGATCTCTGAGG 59.382 57.143 5.23 0.00 32.41 3.86
5164 8813 7.306399 CCAGTTTGAGTACAACTAACAACTACG 60.306 40.741 15.01 0.00 35.63 3.51
5167 8816 6.646267 TCCAGTTTGAGTACAACTAACAACT 58.354 36.000 15.01 3.72 35.63 3.16
5729 9380 6.071784 ACACGTAGACACATACATGAGGTTAA 60.072 38.462 0.00 0.00 0.00 2.01
5776 9427 2.288152 GGCTCTTGGCATTTTTCGTTGA 60.288 45.455 0.00 0.00 44.01 3.18
5874 9525 2.349755 GCCTTCTACGGTGGCCAA 59.650 61.111 7.24 0.00 40.71 4.52
6006 9657 9.906660 GACAAATTCACATCATTAACACCTTAA 57.093 29.630 0.00 0.00 0.00 1.85
6092 9743 6.380079 ACAATCTCTCCTAACCACTGATTT 57.620 37.500 0.00 0.00 0.00 2.17
6129 9780 1.814394 CAAAACAGGCAGAGCAGCATA 59.186 47.619 0.00 0.00 35.83 3.14
6290 9941 6.531594 TCTTCTAAAGCACAACAGATGATACG 59.468 38.462 0.00 0.00 0.00 3.06
6294 9945 5.702670 CCTTCTTCTAAAGCACAACAGATGA 59.297 40.000 0.00 0.00 0.00 2.92
6296 9947 4.457257 GCCTTCTTCTAAAGCACAACAGAT 59.543 41.667 0.00 0.00 0.00 2.90
6297 9948 3.815401 GCCTTCTTCTAAAGCACAACAGA 59.185 43.478 0.00 0.00 0.00 3.41
6298 9949 3.817647 AGCCTTCTTCTAAAGCACAACAG 59.182 43.478 0.00 0.00 0.00 3.16
6309 10002 4.054359 AGGAGAACTCAGCCTTCTTCTA 57.946 45.455 4.23 0.00 32.57 2.10
6341 10034 4.024556 CGCCAAGTTGCCAAATCTATAGAG 60.025 45.833 8.70 0.00 0.00 2.43
6344 10037 3.616219 ACGCCAAGTTGCCAAATCTATA 58.384 40.909 0.00 0.00 0.00 1.31
6438 10131 2.476873 AGCGTGTATAGCTCAACTCG 57.523 50.000 14.85 14.85 41.83 4.18
6455 10148 8.476447 AGGTAGTACTTACAAGAAGGATTTAGC 58.524 37.037 0.00 0.00 33.73 3.09
6644 10337 1.628846 GTCCAACTCCTTAGCCCAAGA 59.371 52.381 0.00 0.00 36.22 3.02
6645 10338 1.351017 TGTCCAACTCCTTAGCCCAAG 59.649 52.381 0.00 0.00 0.00 3.61
6646 10339 1.351017 CTGTCCAACTCCTTAGCCCAA 59.649 52.381 0.00 0.00 0.00 4.12
6647 10340 0.984230 CTGTCCAACTCCTTAGCCCA 59.016 55.000 0.00 0.00 0.00 5.36
6648 10341 1.276622 TCTGTCCAACTCCTTAGCCC 58.723 55.000 0.00 0.00 0.00 5.19
6649 10342 3.339141 CTTTCTGTCCAACTCCTTAGCC 58.661 50.000 0.00 0.00 0.00 3.93
6650 10343 3.339141 CCTTTCTGTCCAACTCCTTAGC 58.661 50.000 0.00 0.00 0.00 3.09
6651 10344 3.583086 TCCCTTTCTGTCCAACTCCTTAG 59.417 47.826 0.00 0.00 0.00 2.18
6652 10345 3.326880 GTCCCTTTCTGTCCAACTCCTTA 59.673 47.826 0.00 0.00 0.00 2.69
6653 10346 2.106684 GTCCCTTTCTGTCCAACTCCTT 59.893 50.000 0.00 0.00 0.00 3.36
6654 10347 1.700186 GTCCCTTTCTGTCCAACTCCT 59.300 52.381 0.00 0.00 0.00 3.69
6655 10348 1.608283 CGTCCCTTTCTGTCCAACTCC 60.608 57.143 0.00 0.00 0.00 3.85
6656 10349 1.343465 TCGTCCCTTTCTGTCCAACTC 59.657 52.381 0.00 0.00 0.00 3.01
6657 10350 1.420430 TCGTCCCTTTCTGTCCAACT 58.580 50.000 0.00 0.00 0.00 3.16
6658 10351 2.249844 TTCGTCCCTTTCTGTCCAAC 57.750 50.000 0.00 0.00 0.00 3.77
6659 10352 3.211045 CTTTTCGTCCCTTTCTGTCCAA 58.789 45.455 0.00 0.00 0.00 3.53
6660 10353 2.486548 CCTTTTCGTCCCTTTCTGTCCA 60.487 50.000 0.00 0.00 0.00 4.02
6661 10354 2.152016 CCTTTTCGTCCCTTTCTGTCC 58.848 52.381 0.00 0.00 0.00 4.02
6662 10355 2.152016 CCCTTTTCGTCCCTTTCTGTC 58.848 52.381 0.00 0.00 0.00 3.51
6663 10356 1.772453 TCCCTTTTCGTCCCTTTCTGT 59.228 47.619 0.00 0.00 0.00 3.41
6664 10357 2.427506 CTCCCTTTTCGTCCCTTTCTG 58.572 52.381 0.00 0.00 0.00 3.02
6665 10358 1.271434 GCTCCCTTTTCGTCCCTTTCT 60.271 52.381 0.00 0.00 0.00 2.52
6666 10359 1.166129 GCTCCCTTTTCGTCCCTTTC 58.834 55.000 0.00 0.00 0.00 2.62
6667 10360 0.476771 TGCTCCCTTTTCGTCCCTTT 59.523 50.000 0.00 0.00 0.00 3.11
6668 10361 0.476771 TTGCTCCCTTTTCGTCCCTT 59.523 50.000 0.00 0.00 0.00 3.95
6669 10362 0.250770 GTTGCTCCCTTTTCGTCCCT 60.251 55.000 0.00 0.00 0.00 4.20
6670 10363 1.241990 GGTTGCTCCCTTTTCGTCCC 61.242 60.000 0.00 0.00 0.00 4.46
6671 10364 1.574702 CGGTTGCTCCCTTTTCGTCC 61.575 60.000 0.00 0.00 0.00 4.79
6672 10365 1.866925 CGGTTGCTCCCTTTTCGTC 59.133 57.895 0.00 0.00 0.00 4.20
6673 10366 2.258726 GCGGTTGCTCCCTTTTCGT 61.259 57.895 0.00 0.00 38.39 3.85
6674 10367 2.187599 CTGCGGTTGCTCCCTTTTCG 62.188 60.000 0.00 0.00 43.34 3.46
6675 10368 0.889186 TCTGCGGTTGCTCCCTTTTC 60.889 55.000 0.00 0.00 43.34 2.29
6676 10369 0.890996 CTCTGCGGTTGCTCCCTTTT 60.891 55.000 0.00 0.00 43.34 2.27
6677 10370 1.302832 CTCTGCGGTTGCTCCCTTT 60.303 57.895 0.00 0.00 43.34 3.11
6678 10371 2.056906 AACTCTGCGGTTGCTCCCTT 62.057 55.000 0.00 0.00 43.34 3.95
6679 10372 2.456287 GAACTCTGCGGTTGCTCCCT 62.456 60.000 0.00 0.00 43.34 4.20
6680 10373 2.032681 AACTCTGCGGTTGCTCCC 59.967 61.111 0.00 0.00 43.34 4.30
6681 10374 2.035442 GGAACTCTGCGGTTGCTCC 61.035 63.158 0.00 0.00 43.34 4.70
6682 10375 2.035442 GGGAACTCTGCGGTTGCTC 61.035 63.158 7.99 0.00 43.34 4.26
6683 10376 2.032681 GGGAACTCTGCGGTTGCT 59.967 61.111 7.99 0.00 43.34 3.91
6684 10377 2.180159 TAGGGGAACTCTGCGGTTGC 62.180 60.000 0.00 0.00 43.20 4.17
6685 10378 0.323629 TTAGGGGAACTCTGCGGTTG 59.676 55.000 0.00 0.00 0.00 3.77
6686 10379 1.209747 GATTAGGGGAACTCTGCGGTT 59.790 52.381 0.00 0.00 0.00 4.44
6687 10380 0.831307 GATTAGGGGAACTCTGCGGT 59.169 55.000 0.00 0.00 0.00 5.68
6688 10381 0.106894 GGATTAGGGGAACTCTGCGG 59.893 60.000 0.00 0.00 0.00 5.69
6689 10382 0.106894 GGGATTAGGGGAACTCTGCG 59.893 60.000 0.00 0.00 0.00 5.18
6690 10383 0.106894 CGGGATTAGGGGAACTCTGC 59.893 60.000 0.00 0.00 0.00 4.26
6691 10384 0.106894 GCGGGATTAGGGGAACTCTG 59.893 60.000 0.00 0.00 0.00 3.35
6692 10385 1.054978 GGCGGGATTAGGGGAACTCT 61.055 60.000 0.00 0.00 0.00 3.24
6693 10386 1.450642 GGCGGGATTAGGGGAACTC 59.549 63.158 0.00 0.00 0.00 3.01
6700 10393 4.664677 CTCGCCGGCGGGATTAGG 62.665 72.222 45.33 21.30 43.62 2.69
6716 10409 3.505773 GGCAGGGATCCATGGCCT 61.506 66.667 35.53 11.50 41.39 5.19
6718 10411 2.114838 GAGGCAGGGATCCATGGC 59.885 66.667 37.57 37.57 41.98 4.40
6719 10412 2.842058 GGAGGCAGGGATCCATGG 59.158 66.667 26.71 4.97 35.54 3.66
6721 10414 3.564218 GCGGAGGCAGGGATCCAT 61.564 66.667 15.23 2.55 39.62 3.41
6722 10415 4.804420 AGCGGAGGCAGGGATCCA 62.804 66.667 15.23 0.00 43.41 3.41
6771 10465 4.410400 CACCGGGGGCAGAGGAAC 62.410 72.222 6.32 0.00 0.00 3.62
6781 10475 0.398098 ACCCTATCTACACACCGGGG 60.398 60.000 0.00 0.00 35.99 5.73
6784 10478 3.219176 TCCTACCCTATCTACACACCG 57.781 52.381 0.00 0.00 0.00 4.94
6813 10507 2.024868 CACCAAATCGACGCCGTCA 61.025 57.895 18.40 4.96 37.05 4.35
6815 10509 1.736645 CTCACCAAATCGACGCCGT 60.737 57.895 0.00 0.00 37.05 5.68
6820 10514 1.459592 CGAACACCTCACCAAATCGAC 59.540 52.381 0.00 0.00 0.00 4.20
6843 10537 4.215613 GCAGACTTATTTTTCCAGAACGGT 59.784 41.667 0.00 0.00 35.57 4.83
6850 10544 4.394729 AGAACGGCAGACTTATTTTTCCA 58.605 39.130 0.00 0.00 0.00 3.53
6851 10545 5.372547 AAGAACGGCAGACTTATTTTTCC 57.627 39.130 0.00 0.00 0.00 3.13
6852 10546 5.391449 GGAAGAACGGCAGACTTATTTTTC 58.609 41.667 0.00 0.00 0.00 2.29
6864 10558 3.327404 GGGGAGGGAAGAACGGCA 61.327 66.667 0.00 0.00 0.00 5.69
6905 10608 1.052768 GATCGTCACGCAAAACACGC 61.053 55.000 0.00 0.00 32.21 5.34
6913 10616 2.706555 GATCCATAGATCGTCACGCA 57.293 50.000 0.00 0.00 39.66 5.24
6928 10631 3.192922 CAAACGACCGGCCGATCC 61.193 66.667 30.73 14.07 0.00 3.36
6940 10643 2.361230 GGGGAAGGGAGCCAAACG 60.361 66.667 0.00 0.00 0.00 3.60
6942 10645 1.697297 GATGGGGAAGGGAGCCAAA 59.303 57.895 0.00 0.00 0.00 3.28
6965 10668 2.125512 CCCTCACACCAGCGCTAC 60.126 66.667 10.99 0.00 0.00 3.58
6972 10675 2.875296 CAAAATCTTCCCCTCACACCA 58.125 47.619 0.00 0.00 0.00 4.17
6973 10676 1.546029 GCAAAATCTTCCCCTCACACC 59.454 52.381 0.00 0.00 0.00 4.16
6978 10681 2.025887 TGAGGAGCAAAATCTTCCCCTC 60.026 50.000 0.00 0.00 39.20 4.30
6980 10683 2.095461 GTGAGGAGCAAAATCTTCCCC 58.905 52.381 0.00 0.00 0.00 4.81
7019 10722 1.594310 GCCTGAGGAGCGAAGAACT 59.406 57.895 0.65 0.00 0.00 3.01
7045 10748 3.200887 GATCGACGATGCCGCCTCT 62.201 63.158 16.49 0.00 39.95 3.69
7053 10756 0.241213 ACATAGCCCGATCGACGATG 59.759 55.000 18.66 20.16 45.77 3.84
7054 10757 0.241213 CACATAGCCCGATCGACGAT 59.759 55.000 18.66 10.78 45.77 3.73
7059 10762 2.476352 CGATACTCACATAGCCCGATCG 60.476 54.545 8.51 8.51 0.00 3.69
7062 10765 0.596577 GCGATACTCACATAGCCCGA 59.403 55.000 0.00 0.00 0.00 5.14
7066 10769 4.158764 AGGGAATAGCGATACTCACATAGC 59.841 45.833 0.00 0.00 0.00 2.97
7085 10788 1.677966 CACGACGAAGAGGGAGGGA 60.678 63.158 0.00 0.00 0.00 4.20
7088 10791 1.878656 AAGCCACGACGAAGAGGGAG 61.879 60.000 0.00 0.00 0.00 4.30
7099 10802 3.909258 GAAGTCGCCGAAGCCACGA 62.909 63.158 0.00 0.00 34.96 4.35
7100 10803 3.479269 GAAGTCGCCGAAGCCACG 61.479 66.667 0.00 0.00 34.96 4.94
7101 10804 3.119096 GGAAGTCGCCGAAGCCAC 61.119 66.667 0.00 0.00 34.57 5.01
7102 10805 4.388499 GGGAAGTCGCCGAAGCCA 62.388 66.667 0.00 0.00 34.57 4.75
7110 10813 2.892425 CGCAGATGGGGAAGTCGC 60.892 66.667 0.00 0.00 0.00 5.19
7111 10814 2.892425 GCGCAGATGGGGAAGTCG 60.892 66.667 0.30 0.00 0.00 4.18
7112 10815 1.522580 GAGCGCAGATGGGGAAGTC 60.523 63.158 11.47 0.00 0.00 3.01
7113 10816 1.630126 ATGAGCGCAGATGGGGAAGT 61.630 55.000 11.47 0.00 0.00 3.01
7114 10817 0.883814 GATGAGCGCAGATGGGGAAG 60.884 60.000 11.47 0.00 0.00 3.46
7115 10818 1.146930 GATGAGCGCAGATGGGGAA 59.853 57.895 11.47 0.00 0.00 3.97
7116 10819 2.824546 GATGAGCGCAGATGGGGA 59.175 61.111 11.47 0.00 0.00 4.81
7117 10820 2.664185 CGATGAGCGCAGATGGGG 60.664 66.667 11.47 0.00 0.00 4.96
7118 10821 2.107750 ACGATGAGCGCAGATGGG 59.892 61.111 11.47 0.00 46.04 4.00
7119 10822 2.242572 CCACGATGAGCGCAGATGG 61.243 63.158 11.47 4.53 46.04 3.51
7120 10823 2.879070 GCCACGATGAGCGCAGATG 61.879 63.158 11.47 0.00 46.04 2.90
7121 10824 2.587194 GCCACGATGAGCGCAGAT 60.587 61.111 11.47 0.00 46.04 2.90
7122 10825 3.706563 GAGCCACGATGAGCGCAGA 62.707 63.158 11.47 0.00 46.04 4.26
7123 10826 3.260483 GAGCCACGATGAGCGCAG 61.260 66.667 11.47 0.00 46.04 5.18
7124 10827 4.819761 GGAGCCACGATGAGCGCA 62.820 66.667 11.47 0.00 46.04 6.09
7130 10833 4.812476 TTCGCCGGAGCCACGATG 62.812 66.667 5.05 0.00 35.48 3.84
7131 10834 3.385749 ATTTCGCCGGAGCCACGAT 62.386 57.895 5.05 0.00 35.48 3.73
7163 10866 1.763546 GATCCACCCCTAGCCTCTGC 61.764 65.000 0.00 0.00 37.95 4.26
7172 10875 1.167033 AAACCCAAAGATCCACCCCT 58.833 50.000 0.00 0.00 0.00 4.79
7208 10926 2.887568 CGGAGACACAGCCATCGC 60.888 66.667 0.00 0.00 0.00 4.58
7209 10927 2.202797 CCGGAGACACAGCCATCG 60.203 66.667 0.00 0.00 0.00 3.84
7215 10933 1.665916 CAGCACACCGGAGACACAG 60.666 63.158 9.46 0.00 0.00 3.66
7239 10957 0.108138 GTCTCCAACCTCATCCACGG 60.108 60.000 0.00 0.00 0.00 4.94
7245 10963 0.905357 CGGGAAGTCTCCAACCTCAT 59.095 55.000 0.00 0.00 44.51 2.90
7262 10980 0.179084 ACAGCCAATATGACGGACGG 60.179 55.000 0.00 0.00 0.00 4.79
7327 11045 4.785453 CCAGAGCGGGTTGAGGGC 62.785 72.222 0.00 0.00 0.00 5.19
7328 11046 3.322466 ACCAGAGCGGGTTGAGGG 61.322 66.667 0.00 0.00 38.19 4.30
7329 11047 2.046892 CACCAGAGCGGGTTGAGG 60.047 66.667 0.00 0.00 39.79 3.86
7330 11048 1.669115 CACACCAGAGCGGGTTGAG 60.669 63.158 0.00 0.00 39.79 3.02
7331 11049 2.425592 CACACCAGAGCGGGTTGA 59.574 61.111 0.00 0.00 39.79 3.18
7332 11050 3.357079 GCACACCAGAGCGGGTTG 61.357 66.667 0.00 0.66 39.79 3.77
7338 11056 2.295253 ATAACTACGCACACCAGAGC 57.705 50.000 0.00 0.00 0.00 4.09
7339 11057 3.380637 AGGTATAACTACGCACACCAGAG 59.619 47.826 0.00 0.00 0.00 3.35
7340 11058 3.129813 CAGGTATAACTACGCACACCAGA 59.870 47.826 0.00 0.00 0.00 3.86
7341 11059 3.444916 CAGGTATAACTACGCACACCAG 58.555 50.000 0.00 0.00 0.00 4.00
7342 11060 2.166870 CCAGGTATAACTACGCACACCA 59.833 50.000 0.00 0.00 0.00 4.17
7343 11061 2.817901 CCAGGTATAACTACGCACACC 58.182 52.381 0.00 0.00 0.00 4.16
7344 11062 2.199236 GCCAGGTATAACTACGCACAC 58.801 52.381 4.53 0.00 0.00 3.82
7345 11063 1.137479 GGCCAGGTATAACTACGCACA 59.863 52.381 0.00 0.00 0.00 4.57
7346 11064 1.137479 TGGCCAGGTATAACTACGCAC 59.863 52.381 0.00 2.45 0.00 5.34
7347 11065 1.487300 TGGCCAGGTATAACTACGCA 58.513 50.000 0.00 0.00 0.00 5.24
7348 11066 2.607631 TTGGCCAGGTATAACTACGC 57.392 50.000 5.11 0.00 0.00 4.42
7349 11067 5.235516 CCTATTTGGCCAGGTATAACTACG 58.764 45.833 5.11 0.00 0.00 3.51
7393 11111 1.241165 GTCCGTTTAACCCAGGTTGG 58.759 55.000 12.41 4.93 38.92 3.77
7394 11112 1.241165 GGTCCGTTTAACCCAGGTTG 58.759 55.000 12.41 0.00 38.92 3.77
7395 11113 0.845337 TGGTCCGTTTAACCCAGGTT 59.155 50.000 7.34 7.34 41.65 3.50
7396 11114 0.399075 CTGGTCCGTTTAACCCAGGT 59.601 55.000 9.92 0.00 40.65 4.00
7397 11115 3.243128 CTGGTCCGTTTAACCCAGG 57.757 57.895 9.92 0.00 40.65 4.45
7398 11116 0.958876 GCCTGGTCCGTTTAACCCAG 60.959 60.000 10.57 10.57 43.34 4.45
7399 11117 1.073548 GCCTGGTCCGTTTAACCCA 59.926 57.895 0.00 0.00 35.84 4.51
7400 11118 1.073548 TGCCTGGTCCGTTTAACCC 59.926 57.895 0.00 0.00 35.84 4.11
7401 11119 1.571215 CGTGCCTGGTCCGTTTAACC 61.571 60.000 0.00 0.00 37.31 2.85
7402 11120 1.571215 CCGTGCCTGGTCCGTTTAAC 61.571 60.000 0.00 0.00 0.00 2.01
7403 11121 1.301874 CCGTGCCTGGTCCGTTTAA 60.302 57.895 0.00 0.00 0.00 1.52
7404 11122 2.344500 CCGTGCCTGGTCCGTTTA 59.656 61.111 0.00 0.00 0.00 2.01
7434 11152 3.583276 TACTTGGCGTGCCTGGACG 62.583 63.158 12.84 6.84 42.42 4.79
7435 11153 0.676782 ATTACTTGGCGTGCCTGGAC 60.677 55.000 12.84 0.00 36.94 4.02
7436 11154 0.392461 GATTACTTGGCGTGCCTGGA 60.392 55.000 12.84 0.00 36.94 3.86
7437 11155 1.705337 CGATTACTTGGCGTGCCTGG 61.705 60.000 12.84 7.22 36.94 4.45
7438 11156 1.019278 ACGATTACTTGGCGTGCCTG 61.019 55.000 12.84 7.60 36.83 4.85
7439 11157 1.019278 CACGATTACTTGGCGTGCCT 61.019 55.000 12.84 0.00 46.86 4.75
7440 11158 1.423845 CACGATTACTTGGCGTGCC 59.576 57.895 3.30 3.30 46.86 5.01
7443 11161 3.884900 GGCACGATTACTTGGCGT 58.115 55.556 0.00 0.00 39.04 5.68
7485 11203 4.106925 GTGCCTGGGCCAGAGAGG 62.107 72.222 34.84 19.99 41.09 3.69
7486 11204 4.463879 CGTGCCTGGGCCAGAGAG 62.464 72.222 34.84 18.97 41.09 3.20
7500 11218 3.344137 ATGTAGCAAGGGGGCCGTG 62.344 63.158 0.00 0.00 36.14 4.94
7501 11219 3.015145 ATGTAGCAAGGGGGCCGT 61.015 61.111 0.00 0.00 0.00 5.68
7502 11220 2.516930 CATGTAGCAAGGGGGCCG 60.517 66.667 0.00 0.00 0.00 6.13
7503 11221 2.123726 CCATGTAGCAAGGGGGCC 60.124 66.667 0.00 0.00 0.00 5.80
7504 11222 2.123726 CCCATGTAGCAAGGGGGC 60.124 66.667 1.75 0.00 38.58 5.80
7505 11223 2.123726 GCCCATGTAGCAAGGGGG 60.124 66.667 10.87 5.74 42.10 5.40
7506 11224 1.454479 CAGCCCATGTAGCAAGGGG 60.454 63.158 10.87 7.92 42.10 4.79
7507 11225 1.454479 CCAGCCCATGTAGCAAGGG 60.454 63.158 5.16 5.16 44.37 3.95
7508 11226 2.123428 GCCAGCCCATGTAGCAAGG 61.123 63.158 7.62 9.17 0.00 3.61
7509 11227 1.378911 TGCCAGCCCATGTAGCAAG 60.379 57.895 7.62 0.05 0.00 4.01
7510 11228 1.678635 GTGCCAGCCCATGTAGCAA 60.679 57.895 7.62 0.00 34.79 3.91
7511 11229 2.045045 GTGCCAGCCCATGTAGCA 60.045 61.111 7.62 0.00 0.00 3.49
7512 11230 3.204827 CGTGCCAGCCCATGTAGC 61.205 66.667 0.00 0.00 0.00 3.58
7513 11231 2.514592 CCGTGCCAGCCCATGTAG 60.515 66.667 0.00 0.00 0.00 2.74
7514 11232 4.794648 GCCGTGCCAGCCCATGTA 62.795 66.667 0.00 0.00 0.00 2.29
7537 11255 4.129737 TCTGCCGGCGTGCTAGAC 62.130 66.667 23.90 0.00 0.00 2.59
7538 11256 3.826754 CTCTGCCGGCGTGCTAGA 61.827 66.667 23.90 17.41 0.00 2.43
7550 11268 3.438017 CTACTCGGGCCAGCTCTGC 62.438 68.421 4.39 0.00 0.00 4.26
7551 11269 2.790791 CCTACTCGGGCCAGCTCTG 61.791 68.421 4.39 0.00 0.00 3.35
7552 11270 2.443016 CCTACTCGGGCCAGCTCT 60.443 66.667 4.39 0.00 0.00 4.09
7553 11271 4.228567 GCCTACTCGGGCCAGCTC 62.229 72.222 4.39 0.00 45.92 4.09
7560 11278 3.064987 CTGGACGTGCCTACTCGGG 62.065 68.421 4.04 0.00 37.11 5.14
7561 11279 2.490217 CTGGACGTGCCTACTCGG 59.510 66.667 4.04 0.00 37.11 4.63
7562 11280 1.028330 TACCTGGACGTGCCTACTCG 61.028 60.000 4.04 0.00 37.63 4.18
7563 11281 0.455005 GTACCTGGACGTGCCTACTC 59.545 60.000 4.04 0.00 37.63 2.59
7564 11282 0.251474 TGTACCTGGACGTGCCTACT 60.251 55.000 4.04 0.00 37.63 2.57
7565 11283 0.822164 ATGTACCTGGACGTGCCTAC 59.178 55.000 4.04 2.31 37.63 3.18
7566 11284 2.026641 GTATGTACCTGGACGTGCCTA 58.973 52.381 4.04 0.00 37.63 3.93
7567 11285 0.822164 GTATGTACCTGGACGTGCCT 59.178 55.000 4.04 0.00 37.63 4.75
7568 11286 0.533491 TGTATGTACCTGGACGTGCC 59.467 55.000 4.04 0.43 37.10 5.01
7569 11287 2.470821 GATGTATGTACCTGGACGTGC 58.529 52.381 0.00 0.00 0.00 5.34
7570 11288 2.356695 TCGATGTATGTACCTGGACGTG 59.643 50.000 0.00 0.00 0.00 4.49
7571 11289 2.646930 TCGATGTATGTACCTGGACGT 58.353 47.619 0.00 0.00 0.00 4.34
7572 11290 3.667166 CGATCGATGTATGTACCTGGACG 60.667 52.174 10.26 0.00 0.00 4.79
7573 11291 3.252701 ACGATCGATGTATGTACCTGGAC 59.747 47.826 24.34 0.00 0.00 4.02
7574 11292 3.483421 ACGATCGATGTATGTACCTGGA 58.517 45.455 24.34 0.00 0.00 3.86
7575 11293 3.917329 ACGATCGATGTATGTACCTGG 57.083 47.619 24.34 0.00 0.00 4.45
7576 11294 3.981416 CCAACGATCGATGTATGTACCTG 59.019 47.826 24.34 0.00 0.00 4.00
7577 11295 3.552273 GCCAACGATCGATGTATGTACCT 60.552 47.826 24.34 0.00 0.00 3.08
7578 11296 2.729882 GCCAACGATCGATGTATGTACC 59.270 50.000 24.34 0.00 0.00 3.34
7579 11297 3.425525 CAGCCAACGATCGATGTATGTAC 59.574 47.826 24.34 5.06 0.00 2.90
7580 11298 3.067601 ACAGCCAACGATCGATGTATGTA 59.932 43.478 24.34 0.00 0.00 2.29
7581 11299 2.159099 ACAGCCAACGATCGATGTATGT 60.159 45.455 24.34 21.53 0.00 2.29
7582 11300 2.473816 ACAGCCAACGATCGATGTATG 58.526 47.619 24.34 20.91 0.00 2.39
7583 11301 2.890808 ACAGCCAACGATCGATGTAT 57.109 45.000 24.34 7.93 0.00 2.29
7584 11302 2.665649 AACAGCCAACGATCGATGTA 57.334 45.000 24.34 0.00 0.00 2.29
7585 11303 1.808411 AAACAGCCAACGATCGATGT 58.192 45.000 24.34 14.31 0.00 3.06
7586 11304 2.416547 AGAAAACAGCCAACGATCGATG 59.583 45.455 24.34 20.61 0.00 3.84
7587 11305 2.699954 AGAAAACAGCCAACGATCGAT 58.300 42.857 24.34 7.21 0.00 3.59
7588 11306 2.163818 AGAAAACAGCCAACGATCGA 57.836 45.000 24.34 0.00 0.00 3.59
7589 11307 3.250744 TCTAGAAAACAGCCAACGATCG 58.749 45.455 14.88 14.88 0.00 3.69
7590 11308 5.607119 TTTCTAGAAAACAGCCAACGATC 57.393 39.130 15.57 0.00 0.00 3.69
7591 11309 6.183360 TGTTTTTCTAGAAAACAGCCAACGAT 60.183 34.615 26.47 0.00 42.96 3.73
7592 11310 5.124138 TGTTTTTCTAGAAAACAGCCAACGA 59.876 36.000 26.47 9.16 42.96 3.85
7593 11311 5.336744 TGTTTTTCTAGAAAACAGCCAACG 58.663 37.500 26.47 0.00 42.96 4.10
7601 11319 7.797123 ACAACGATCGATGTTTTTCTAGAAAAC 59.203 33.333 26.47 20.90 39.70 2.43
7602 11320 7.857569 ACAACGATCGATGTTTTTCTAGAAAA 58.142 30.769 23.42 23.65 38.40 2.29
7603 11321 7.359765 GGACAACGATCGATGTTTTTCTAGAAA 60.360 37.037 28.36 13.99 31.28 2.52
7604 11322 6.090358 GGACAACGATCGATGTTTTTCTAGAA 59.910 38.462 28.36 0.00 31.28 2.10
7605 11323 5.575606 GGACAACGATCGATGTTTTTCTAGA 59.424 40.000 28.36 0.00 31.28 2.43
7606 11324 5.220416 GGGACAACGATCGATGTTTTTCTAG 60.220 44.000 28.36 2.57 31.28 2.43
7607 11325 4.628333 GGGACAACGATCGATGTTTTTCTA 59.372 41.667 28.36 0.00 31.28 2.10
7608 11326 3.435671 GGGACAACGATCGATGTTTTTCT 59.564 43.478 28.36 7.94 31.28 2.52
7609 11327 3.723835 CGGGACAACGATCGATGTTTTTC 60.724 47.826 28.36 16.95 35.47 2.29
7610 11328 2.158841 CGGGACAACGATCGATGTTTTT 59.841 45.455 28.36 9.02 35.47 1.94
7611 11329 1.730064 CGGGACAACGATCGATGTTTT 59.270 47.619 28.36 9.38 35.47 2.43
7612 11330 1.337447 ACGGGACAACGATCGATGTTT 60.337 47.619 28.36 10.09 37.61 2.83
7613 11331 0.245539 ACGGGACAACGATCGATGTT 59.754 50.000 28.36 12.71 37.61 2.71
7614 11332 0.245539 AACGGGACAACGATCGATGT 59.754 50.000 28.15 28.15 37.61 3.06
7615 11333 0.645355 CAACGGGACAACGATCGATG 59.355 55.000 24.34 23.07 37.61 3.84
7616 11334 0.459585 CCAACGGGACAACGATCGAT 60.460 55.000 24.34 7.21 37.61 3.59
7617 11335 1.080366 CCAACGGGACAACGATCGA 60.080 57.895 24.34 0.00 37.61 3.59
7618 11336 2.736682 GCCAACGGGACAACGATCG 61.737 63.158 14.88 14.88 37.61 3.69
7619 11337 1.359459 GAGCCAACGGGACAACGATC 61.359 60.000 0.00 0.00 37.61 3.69
7620 11338 1.375523 GAGCCAACGGGACAACGAT 60.376 57.895 0.00 0.00 37.61 3.73
7621 11339 2.029964 GAGCCAACGGGACAACGA 59.970 61.111 0.00 0.00 37.61 3.85
7622 11340 2.030562 AGAGCCAACGGGACAACG 59.969 61.111 0.00 0.00 40.31 4.10
7623 11341 1.966451 CCAGAGCCAACGGGACAAC 60.966 63.158 0.00 0.00 35.59 3.32
7624 11342 1.488705 ATCCAGAGCCAACGGGACAA 61.489 55.000 0.00 0.00 37.01 3.18
7625 11343 1.899437 GATCCAGAGCCAACGGGACA 61.899 60.000 0.00 0.00 37.01 4.02
7626 11344 1.153349 GATCCAGAGCCAACGGGAC 60.153 63.158 0.00 0.00 37.01 4.46
7627 11345 2.721167 CGATCCAGAGCCAACGGGA 61.721 63.158 0.00 0.00 38.36 5.14
7628 11346 2.202932 CGATCCAGAGCCAACGGG 60.203 66.667 0.00 0.00 37.18 5.28
7629 11347 2.016393 TAGCGATCCAGAGCCAACGG 62.016 60.000 0.00 0.00 0.00 4.44
7630 11348 0.872021 GTAGCGATCCAGAGCCAACG 60.872 60.000 0.00 0.00 0.00 4.10
7631 11349 0.530870 GGTAGCGATCCAGAGCCAAC 60.531 60.000 0.00 0.00 0.00 3.77
7632 11350 0.687757 AGGTAGCGATCCAGAGCCAA 60.688 55.000 0.00 0.00 0.00 4.52
7633 11351 1.075970 AGGTAGCGATCCAGAGCCA 60.076 57.895 0.00 0.00 0.00 4.75
7634 11352 1.663173 GAGGTAGCGATCCAGAGCC 59.337 63.158 0.00 0.00 0.00 4.70
7635 11353 1.284408 CGAGGTAGCGATCCAGAGC 59.716 63.158 0.00 0.00 0.00 4.09
7636 11354 1.025812 AACGAGGTAGCGATCCAGAG 58.974 55.000 0.00 0.00 34.83 3.35
7637 11355 0.738975 CAACGAGGTAGCGATCCAGA 59.261 55.000 0.00 0.00 34.83 3.86
7638 11356 0.249073 CCAACGAGGTAGCGATCCAG 60.249 60.000 0.00 0.00 34.83 3.86
7639 11357 1.813859 CCAACGAGGTAGCGATCCA 59.186 57.895 0.00 0.00 34.83 3.41
7640 11358 1.591863 GCCAACGAGGTAGCGATCC 60.592 63.158 0.00 0.00 40.61 3.36
7641 11359 0.249489 ATGCCAACGAGGTAGCGATC 60.249 55.000 0.00 0.00 40.61 3.69
7642 11360 0.249489 GATGCCAACGAGGTAGCGAT 60.249 55.000 0.00 0.00 40.61 4.58
7643 11361 1.141019 GATGCCAACGAGGTAGCGA 59.859 57.895 0.00 0.00 40.61 4.93
7644 11362 3.706140 GATGCCAACGAGGTAGCG 58.294 61.111 0.00 0.00 40.61 4.26
7645 11363 2.526120 GCGATGCCAACGAGGTAGC 61.526 63.158 0.00 0.00 40.61 3.58
7646 11364 1.141881 AGCGATGCCAACGAGGTAG 59.858 57.895 0.00 0.00 40.61 3.18
7647 11365 1.153647 CAGCGATGCCAACGAGGTA 60.154 57.895 0.00 0.00 40.61 3.08
7648 11366 2.434884 CAGCGATGCCAACGAGGT 60.435 61.111 0.00 0.00 40.61 3.85
7649 11367 2.930385 ATCCAGCGATGCCAACGAGG 62.930 60.000 0.00 0.00 41.84 4.63
7650 11368 1.091771 AATCCAGCGATGCCAACGAG 61.092 55.000 0.00 0.00 0.00 4.18
7651 11369 0.176910 TAATCCAGCGATGCCAACGA 59.823 50.000 0.00 0.00 0.00 3.85
7652 11370 1.013596 TTAATCCAGCGATGCCAACG 58.986 50.000 0.00 0.00 0.00 4.10
7653 11371 3.502191 TTTTAATCCAGCGATGCCAAC 57.498 42.857 0.00 0.00 0.00 3.77
7672 11390 2.094026 GCCGGCCAATGATTCTCTTTTT 60.094 45.455 18.11 0.00 0.00 1.94
7673 11391 1.478105 GCCGGCCAATGATTCTCTTTT 59.522 47.619 18.11 0.00 0.00 2.27
7674 11392 1.106285 GCCGGCCAATGATTCTCTTT 58.894 50.000 18.11 0.00 0.00 2.52
7675 11393 0.753111 GGCCGGCCAATGATTCTCTT 60.753 55.000 40.73 0.00 35.81 2.85
7676 11394 1.152881 GGCCGGCCAATGATTCTCT 60.153 57.895 40.73 0.00 35.81 3.10
7677 11395 2.546494 CGGCCGGCCAATGATTCTC 61.546 63.158 42.78 14.10 35.37 2.87
7678 11396 2.516930 CGGCCGGCCAATGATTCT 60.517 61.111 42.78 0.00 35.37 2.40
7679 11397 4.270376 GCGGCCGGCCAATGATTC 62.270 66.667 42.78 18.91 35.37 2.52
7697 11415 4.969196 AGCTGCACACGGTCACGG 62.969 66.667 1.02 0.00 46.48 4.94
7699 11417 3.044305 GGAGCTGCACACGGTCAC 61.044 66.667 0.00 0.00 0.00 3.67
7700 11418 3.545574 TGGAGCTGCACACGGTCA 61.546 61.111 2.72 0.00 0.00 4.02
7701 11419 3.044305 GTGGAGCTGCACACGGTC 61.044 66.667 30.84 4.42 0.00 4.79
7702 11420 3.814615 CTGTGGAGCTGCACACGGT 62.815 63.158 33.97 0.00 40.39 4.83
7703 11421 3.046087 CTGTGGAGCTGCACACGG 61.046 66.667 33.97 22.66 40.39 4.94
7704 11422 2.280389 ACTGTGGAGCTGCACACG 60.280 61.111 33.97 28.72 40.39 4.49
7705 11423 2.901292 GCACTGTGGAGCTGCACAC 61.901 63.158 33.97 21.96 38.08 3.82
7706 11424 2.592574 GCACTGTGGAGCTGCACA 60.593 61.111 34.72 34.72 0.00 4.57
7707 11425 3.720193 CGCACTGTGGAGCTGCAC 61.720 66.667 29.44 29.44 0.00 4.57
7710 11428 4.994471 TGGCGCACTGTGGAGCTG 62.994 66.667 10.83 0.00 0.00 4.24
7711 11429 4.694233 CTGGCGCACTGTGGAGCT 62.694 66.667 10.83 0.00 0.00 4.09
7712 11430 4.996434 ACTGGCGCACTGTGGAGC 62.996 66.667 10.83 3.90 0.00 4.70
7713 11431 3.046087 CACTGGCGCACTGTGGAG 61.046 66.667 20.39 4.82 43.10 3.86
7725 11443 3.506096 CTGGCATGAGCGCACTGG 61.506 66.667 11.47 0.48 43.41 4.00
7726 11444 2.435410 TCTGGCATGAGCGCACTG 60.435 61.111 11.47 4.67 43.41 3.66
7727 11445 2.125229 CTCTGGCATGAGCGCACT 60.125 61.111 11.47 0.00 43.41 4.40
7728 11446 2.435586 ACTCTGGCATGAGCGCAC 60.436 61.111 11.47 3.13 43.41 5.34
7729 11447 2.125391 GACTCTGGCATGAGCGCA 60.125 61.111 11.47 0.00 43.41 6.09
7730 11448 1.742880 TTGACTCTGGCATGAGCGC 60.743 57.895 0.00 0.00 43.41 5.92
7731 11449 0.671472 TGTTGACTCTGGCATGAGCG 60.671 55.000 12.08 0.00 43.41 5.03
7732 11450 1.669779 GATGTTGACTCTGGCATGAGC 59.330 52.381 12.08 7.32 37.58 4.26
7733 11451 1.931841 CGATGTTGACTCTGGCATGAG 59.068 52.381 0.00 10.98 39.78 2.90
7734 11452 1.405933 CCGATGTTGACTCTGGCATGA 60.406 52.381 0.00 0.00 0.00 3.07
7735 11453 1.012086 CCGATGTTGACTCTGGCATG 58.988 55.000 0.00 0.00 0.00 4.06
7736 11454 0.745845 GCCGATGTTGACTCTGGCAT 60.746 55.000 0.00 0.00 42.03 4.40
7737 11455 1.375908 GCCGATGTTGACTCTGGCA 60.376 57.895 0.00 0.00 42.03 4.92
7738 11456 2.109126 GGCCGATGTTGACTCTGGC 61.109 63.158 0.00 0.00 41.72 4.85
7739 11457 0.321564 TTGGCCGATGTTGACTCTGG 60.322 55.000 0.00 0.00 0.00 3.86
7740 11458 1.197721 GTTTGGCCGATGTTGACTCTG 59.802 52.381 0.00 0.00 0.00 3.35
7741 11459 1.523758 GTTTGGCCGATGTTGACTCT 58.476 50.000 0.00 0.00 0.00 3.24
7742 11460 0.521735 GGTTTGGCCGATGTTGACTC 59.478 55.000 0.00 0.00 0.00 3.36
7743 11461 0.110486 AGGTTTGGCCGATGTTGACT 59.890 50.000 0.00 0.00 43.70 3.41
7744 11462 0.240945 CAGGTTTGGCCGATGTTGAC 59.759 55.000 0.00 0.00 43.70 3.18
7745 11463 0.179004 ACAGGTTTGGCCGATGTTGA 60.179 50.000 0.00 0.00 43.70 3.18
7746 11464 2.340427 ACAGGTTTGGCCGATGTTG 58.660 52.632 0.00 0.00 43.70 3.33
7747 11465 4.920828 ACAGGTTTGGCCGATGTT 57.079 50.000 0.00 0.00 43.70 2.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.